Your job contains 1 sequence.
>014956
MDTSSSSSASAAAPSAVTFYDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQ
EFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSEDVKIDQEISEK
ICLLQTFLRPEHLDIPTFLQNEASWLLAEKELQKINALKAPREKVLCIMNCCRIINNLLL
NASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLV
SAKTFILDLNAKSLSMEETEFEKSMQAARLANKVTLIEESTTSNGIKTLGEQGHPERHDV
TRIEASAMSNDRKSLEEQRRVGPSQRIYGNNTITSGGYGYPFMEAEASRLTTGDVEKLLS
VYKDVVRKYTNLCRAVRHVSVPMTVAPIPHFEGNNSSFKQPATKTSASTDSKRGE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014956
(415 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092211 - symbol:VPS9A species:3702 "Arabidops... 737 1.7e-80 2
TAIR|locus:2184727 - symbol:VPS9B "AT5G09320" species:370... 677 1.3e-66 1
DICTYBASE|DDB_G0285073 - symbol:DDB_G0285073 "vacuolar so... 350 2.4e-34 2
DICTYBASE|DDB_G0289495 - symbol:DDB_G0289495 "vacuolar so... 309 3.1e-26 1
POMBASE|SPBC4F6.10 - symbol:vps901 "guanyl-nucleotide exc... 299 7.6e-26 1
ASPGD|ASPL0000018244 - symbol:AN3678 species:162425 "Emer... 252 1.0e-25 2
UNIPROTKB|E1C0P2 - symbol:RABGEF1 "Uncharacterized protei... 282 9.4e-24 1
ZFIN|ZDB-GENE-040426-813 - symbol:rabgef1l "RAB guanine n... 279 3.8e-23 1
UNIPROTKB|F6Y7P9 - symbol:RABGEF1 "Uncharacterized protei... 279 4.8e-23 1
UNIPROTKB|F1RJI2 - symbol:LOC100516668 "Uncharacterized p... 279 4.8e-23 1
UNIPROTKB|E2R706 - symbol:RABGEF1 "Uncharacterized protei... 279 1.4e-22 1
ZFIN|ZDB-GENE-040426-1486 - symbol:rabgef1 "RAB guanine n... 274 3.7e-22 1
UNIPROTKB|Q2TBX8 - symbol:RABGEF1 "RABGEF1 protein" speci... 271 9.4e-22 1
UNIPROTKB|O18973 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 271 9.5e-22 1
RGD|1307295 - symbol:Rabgef1 "RAB guanine nucleotide exch... 270 1.5e-21 1
MGI|MGI:1929459 - symbol:Rabgef1 "RAB guanine nucleotide ... 269 1.8e-21 1
UNIPROTKB|E9PFK9 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 268 2.7e-21 1
UNIPROTKB|B4DZM7 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 268 2.7e-21 1
SGD|S000004563 - symbol:VPS9 "Guanine nucleotide exchange... 266 3.2e-21 1
UNIPROTKB|E7ERJ8 - symbol:KCTD7 "BTB/POZ domain-containin... 268 3.2e-21 1
WB|WBGene00012644 - symbol:rabx-5 species:6239 "Caenorhab... 257 2.7e-20 2
UNIPROTKB|Q8I100 - symbol:rabx-5 "Protein RABX-5" species... 257 2.7e-20 2
UNIPROTKB|Q9UJ41 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 259 9.6e-20 1
FB|FBgn0262937 - symbol:Rabex-5 "Rabaptin-5-associated ex... 258 1.3e-19 1
UNIPROTKB|E1C268 - symbol:GAPVD1 "Uncharacterized protein... 254 1.2e-18 1
UNIPROTKB|F8W9S7 - symbol:GAPVD1 "GTPase-activating prote... 253 1.6e-18 1
UNIPROTKB|A5D794 - symbol:GAPVD1 "GTPase-activating prote... 253 1.6e-18 1
RGD|1307479 - symbol:Gapvd1 "GTPase activating protein an... 253 1.7e-18 1
UNIPROTKB|Q14C86 - symbol:GAPVD1 "GTPase-activating prote... 253 1.7e-18 1
UNIPROTKB|A2RV61 - symbol:gapvd1 "GTPase-activating prote... 252 2.1e-18 1
UNIPROTKB|E2RA13 - symbol:GAPVD1 "Uncharacterized protein... 252 2.2e-18 1
MGI|MGI:1913941 - symbol:Gapvd1 "GTPase activating protei... 249 4.9e-18 1
UNIPROTKB|F1RS34 - symbol:GAPVD1 "Uncharacterized protein... 249 5.0e-18 1
UNIPROTKB|E2RA33 - symbol:GAPVD1 "Uncharacterized protein... 248 6.1e-18 1
UNIPROTKB|E2RA32 - symbol:GAPVD1 "Uncharacterized protein... 248 6.5e-18 1
ZFIN|ZDB-GENE-040718-117 - symbol:gapvd1 "GTPase activati... 236 1.6e-16 1
DICTYBASE|DDB_G0271844 - symbol:DDB_G0271844 "Rho GTPase ... 234 3.1e-16 1
CGD|CAL0006139 - symbol:orf19.5533 species:5476 "Candida ... 230 3.1e-16 1
UNIPROTKB|A8WVM4 - symbol:rme-6 "Receptor-mediated endocy... 207 2.2e-13 1
DICTYBASE|DDB_G0272038 - symbol:rgfA "Vps9 domain-contain... 197 1.6e-12 1
DICTYBASE|DDB_G0275413 - symbol:DDB_G0275413 "DUF726 fami... 197 3.5e-12 1
DICTYBASE|DDB_G0291115 - symbol:DDB_G0291115 "vacuolar so... 196 7.5e-12 1
WB|WBGene00004377 - symbol:rme-6 species:6239 "Caenorhabd... 188 2.9e-11 1
UNIPROTKB|Q9GYH7 - symbol:rme-6 "Receptor-mediated endocy... 188 2.9e-11 1
FB|FBgn0030286 - symbol:CG1657 species:7227 "Drosophila m... 188 5.1e-11 1
UNIPROTKB|Q29HW3 - symbol:GA14078 "Receptor-mediated endo... 181 1.1e-09 2
SGD|S000005991 - symbol:MUK1 "Cytoplasmic protein of unkn... 122 0.00026 1
UNIPROTKB|Q96NW4 - symbol:ANKRD27 "Ankyrin repeat domain-... 124 0.00031 1
ASPGD|ASPL0000000759 - symbol:AN5920 species:162425 "Emer... 118 0.00039 2
ZFIN|ZDB-GENE-030131-7043 - symbol:si:ch211-85n16.4 "si:c... 119 0.00080 1
UNIPROTKB|F1PYJ6 - symbol:ANKRD27 "Uncharacterized protei... 120 0.00084 1
UNIPROTKB|F1RNY3 - symbol:ANKRD27 "Uncharacterized protei... 128 0.00090 2
>TAIR|locus:2092211 [details] [associations]
symbol:VPS9A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006810 "transport"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0000919
"cell plate assembly" evidence=IMP] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IMP] [GO:0042546 "cell wall biogenesis"
evidence=IMP] [GO:0048528 "post-embryonic root development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF02204 GO:GO:0005525 GO:GO:0005829
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
GO:GO:0005096 GO:GO:0043547 GO:GO:0009790 GO:GO:0005089
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
EMBL:AP000417 EMBL:AB025631 GO:GO:0042546 GO:GO:0048528
eggNOG:NOG301606 PDB:2EFC PDB:2EFD PDB:2EFE PDB:2EFH PDBsum:2EFC
PDBsum:2EFD PDBsum:2EFE PDBsum:2EFH EMBL:AY045810 EMBL:AY079338
IPI:IPI00543757 RefSeq:NP_566645.1 UniGene:At.22893
ProteinModelPortal:Q9LT31 SMR:Q9LT31 STRING:Q9LT31 PaxDb:Q9LT31
PRIDE:Q9LT31 EnsemblPlants:AT3G19770.1 GeneID:821514
KEGG:ath:AT3G19770 TAIR:At3g19770 HOGENOM:HOG000029999
InParanoid:Q9LT31 OMA:MEESEFE PhylomeDB:Q9LT31
ProtClustDB:CLSN2688573 EvolutionaryTrace:Q9LT31
Genevestigator:Q9LT31 GO:GO:0000919 Uniprot:Q9LT31
Length = 520
Score = 737 (264.5 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 156/329 (47%), Positives = 225/329 (68%)
Query: 20 YDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANA 79
+DFL+RMR P++ D V+SIKSFIVSFS N +PE D VQEFF+ ME+A + HPLW+
Sbjct: 11 HDFLERMRKPSAGDFVKSIKSFIVSFSNNAPDPEKDCAMVQEFFSKMEAAFRAHPLWSGC 70
Query: 80 TIEAIESAMEGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDI-PTF 138
+ E ++SA +GLEKYVMTKLF+R FAS +E+V D+++ +K+ L+Q F+ PE+LDI PTF
Sbjct: 71 SEEELDSAGDGLEKYVMTKLFTRVFASNTEEVIADEKLFQKMSLVQQFISPENLDIQPTF 130
Query: 139 LQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLP 198
QNE+SWLLA+KELQKIN KAPR+K+ ASI+ N GAD+FLP
Sbjct: 131 -QNESSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIASNENAPGADEFLP 189
Query: 199 VLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLSMEE 258
VLIY+ IKANPPQLHSN+ +IQ YRR++ LV EAAY+FTN++SA++FI +++AKS+S++E
Sbjct: 190 VLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDE 249
Query: 259 TEFEKSMQAARLANKVTLIEESTTSNGIKTLGEQGHPERHDVTRIEASAMSNDRKSLEEQ 318
EFEK+M++AR +++ ++ T G + P R + T + +++ R++ Q
Sbjct: 250 AEFEKNMESARA--RISGLDSQTYQTGHGS----APPPRDESTLQKTQSLNPKRENTLFQ 303
Query: 319 RRVGPSQRIYGNNTITSGGYGYPFMEAEA 347
+ S + G N + + P +AE+
Sbjct: 304 SK--SSDSLSGTNELLNINSETPMKKAES 330
Score = 90 (36.7 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 340 YPFMEAEASRLTTGDVEKLLSVYKDVVRKYTNLCRAVRH-VSVPMTVAPIPHFEGNNSSF 398
YP++ A A L GDVE LL+ YK +V KY L + + S+ + +P+ G N+S
Sbjct: 354 YPYIFASAGDLRIGDVEGLLNSYKQLVFKYVCLTKGLGDGTSLAPSSSPLQASSGFNTS- 412
Query: 399 KQPATKTSASTD 410
K+ +S+D
Sbjct: 413 KESEDHRRSSSD 424
>TAIR|locus:2184727 [details] [associations]
symbol:VPS9B "AT5G09320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006810 "transport" evidence=ISS]
Pfam:PF02204 EMBL:CP002688 EMBL:AL391712 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 IPI:IPI00543083
RefSeq:NP_196494.1 UniGene:At.32529 ProteinModelPortal:Q9FY83
SMR:Q9FY83 EnsemblPlants:AT5G09320.1 GeneID:830791
KEGG:ath:AT5G09320 TAIR:At5g09320 HOGENOM:HOG000152589
InParanoid:Q9FY83 OMA:FASNTED PhylomeDB:Q9FY83
ProtClustDB:CLSN2916871 ArrayExpress:Q9FY83 Genevestigator:Q9FY83
Uniprot:Q9FY83
Length = 712
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 166/407 (40%), Positives = 237/407 (58%)
Query: 20 YDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANA 79
++FL + P++ D ++SIKSFIVS +PE D VQ+FF MESA + HPLW+
Sbjct: 11 HNFLSK---PSAKDFIKSIKSFIVSILNTAPDPEKDCDAVQDFFYKMESAFRAHPLWSGC 67
Query: 80 TIEAIESAMEGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDI-PTF 138
+ + +++A +GLEKYVMTKLF R FAS +EDV D+++ +KI L+Q F+ PE+LDI PTF
Sbjct: 68 SDDELDNAGDGLEKYVMTKLFPRVFASNTEDVISDEKLFQKISLVQQFISPENLDIQPTF 127
Query: 139 LQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLP 198
QN+ SWLLA+KELQKIN APR+K+ ASI+ N GAD FLP
Sbjct: 128 -QNQTSWLLAQKELQKINMYNAPRDKLMCILRCCKVINNLLLNASIASNQNEPGADQFLP 186
Query: 199 VLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLSMEE 258
VLIY+ IKANPPQ HSN+ +IQ YRRQ+ LV EA Y FTN++SA++FI +++AKSLSM+E
Sbjct: 187 VLIYVTIKANPPQFHSNLLYIQRYRRQSKLVGEAGYLFTNILSAESFISNIDAKSLSMDE 246
Query: 259 TEFEKSMQAARLANKVTLIEESTTSNGIKTLGEQGHPERHDVTRIEAS--AMSNDRKSLE 316
+FE M++A + T +G L + +R ++ S + S ++L
Sbjct: 247 ADFETKMKSAHARLSGPGSQSYQTDHGA-ALPTAHNTKRENMLLHTKSTDSFSGTNETLS 305
Query: 317 EQ--RRVGPSQRIY--GNNTI-------TSGGYGYPFMEAEASRLTTGDVEKLLSVYKDV 365
E ++ P + G T+ T YP+M A L GDVE LL+ YK +
Sbjct: 306 ETPIKKADPITDLENKGAATLLNDRSEATKIFQEYPYMFASVGDLKIGDVEDLLNNYKQL 365
Query: 366 VRKYTNLCRAVRHV-SVPMTVAPIPHFE-GNNSSFKQPATKTSASTD 410
V KY L + + S+ ++P+ + N + +T + TD
Sbjct: 366 VFKYVCLSKGLGDATSLTPCISPLQASKVSENHTTLSSDFQTKSETD 412
>DICTYBASE|DDB_G0285073 [details] [associations]
symbol:DDB_G0285073 "vacuolar sorting protein 9
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] dictyBase:DDB_G0285073 Pfam:PF02204 EMBL:AAFI02000073
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
eggNOG:NOG301606 RefSeq:XP_639976.1 ProteinModelPortal:Q54NU1
EnsemblProtists:DDB0234179 GeneID:8624888 KEGG:ddi:DDB_G0285073
InParanoid:Q54NU1 OMA:IEESEFY Uniprot:Q54NU1
Length = 726
Score = 350 (128.3 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 89/260 (34%), Positives = 139/260 (53%)
Query: 21 DFLDRMRNPASLDLVRSIKSFIVSFSFNNANP-ENDGKRVQEFFTTMESAIKDHPLWANA 79
+F ++++ ++D+ RS+ +F+ FS N + E G + + +E + PLWANA
Sbjct: 147 NFYTKLKHKNAIDIRRSLLNFVTQFSTNGPSLIEEQGHTIITYTRELEHWVLSLPLWANA 206
Query: 80 TIEAIESAMEGLEKYVMTKLFSRTFAST-------------SEDVKIDQEISEKI---CL 123
+E +G+EKY+M KL+ TF SE I E K+
Sbjct: 207 GEAEVEGIRDGIEKYIMGKLYHCTFPPARLGGLELTEGNIVSEGSLIPTEEDLKLFKHIT 266
Query: 124 LQTFLRPEHLDIPTFLQ-NEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXA 182
+ FL P+HLDI F+ NE LA EL+KIN K PR+K+
Sbjct: 267 IHGFLEPQHLDIQQFINSNEQRQNLAISELRKINTYKTPRDKMVCVYNCCKVIFKLLK-- 324
Query: 183 SISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSA 242
S++ N GAD+FLP+LIY+++K+NP L SNI ++ +R Q+ +++E A YFT+LVSA
Sbjct: 325 SVNPNGNPSGADEFLPILIYVVLKSNPIMLKSNITYVNTFRDQSRMMTEIACYFTHLVSA 384
Query: 243 KTFILDLNAK-SLSMEETEF 261
+FI ++ L++EE+EF
Sbjct: 385 VSFIENITTPVDLTIEESEF 404
Score = 55 (24.4 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 26/121 (21%), Positives = 51/121 (42%)
Query: 248 DLNAKSLSMEETEFEKSMQAARLANKVTLIEESTTSNGIKTLGEQGHPERHDV--TRIEA 305
+LN KS +++ T S ++ ST +N L +Q + + + I +
Sbjct: 463 NLNVKSPTIKPTTNASSTLPPLPHSRGHSRHSSTNNNNNSQLNQQNFGDIDTLINSNINS 522
Query: 306 SAMSNDRKSLEEQRRVGPSQRIYGNNTITSGGYGYPFMEAEASRLTTGDVEKLLSVYKDV 365
+ SN+ S+ ++ + +Y +N Y F+ + + G + KLL YK +
Sbjct: 523 NINSNNSPSVVNEQFI-----VYQDNIELEKRY--EFLNYQTDDIKIGQISKLLEDYKKL 575
Query: 366 V 366
V
Sbjct: 576 V 576
>DICTYBASE|DDB_G0289495 [details] [associations]
symbol:DDB_G0289495 "vacuolar sorting protein 9
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] dictyBase:DDB_G0289495 Pfam:PF02204 EMBL:AAFI02000141
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
eggNOG:NOG301606 RefSeq:XP_636178.1 ProteinModelPortal:Q54HF9
EnsemblProtists:DDB0234181 GeneID:8627165 KEGG:ddi:DDB_G0289495
InParanoid:Q54HF9 OMA:YLVECIN Uniprot:Q54HF9
Length = 1197
Score = 309 (113.8 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 98/325 (30%), Positives = 157/325 (48%)
Query: 18 TFYDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKR--VQEFFTTMESAIKDHPL 75
++ FL ++ N +L + SI SFI + N ND R + +F M++ + P
Sbjct: 593 SYEHFLSKLEN--TLPIKSSIDSFIRTLK--NRKVANDDLREALLDFVDNMQNTLTLDPQ 648
Query: 76 WANATIEAIESAMEGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDI 135
W+ ++ E + + L++YV+ K++ F + E+ K DQ++S I L +F+ EH++I
Sbjct: 649 WSQSSEEELNYSSHHLQQYVLEKIYDYVFQPSEEEAKKDQDLSMLIDKL-SFITLEHMEI 707
Query: 136 PTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADD 195
P + +EA W A K L KIN ++ R KV + EL GAD
Sbjct: 708 PIYGFSEAMWYKAGKYLLKINFTQSCRHKVMYIMKCCKTILKHFS----THLKELSGADF 763
Query: 196 FLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLS 255
LP LI++++K NPP LHSN+ FI + + SEA YY T L+SA FI +L + L
Sbjct: 764 LLPNLIWVLLKTNPPFLHSNVIFISKFSDSSD--SEAIYYLTQLISAIYFIENLKPELLK 821
Query: 256 MEETEFEKSMQAA-----RLANKVTLIEESTTSNGIKTLGEQGHPERHDVTRIEASAMSN 310
+++ E+ K M + R + +L + +NG T I + +N
Sbjct: 822 IDKKEYYKLMGTSSPIISRSPSLQSLNNNNNNNNGNNNNNGNNTTTTTTTTTITTTNNNN 881
Query: 311 DRKSLEEQRRVGPSQRIYGNNTITS 335
+ S+E PS I NN +TS
Sbjct: 882 NNNSIE----ASPS--IKANN-LTS 899
>POMBASE|SPBC4F6.10 [details] [associations]
symbol:vps901 "guanyl-nucleotide exchange factor Vps901
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006623 "protein targeting to vacuole"
evidence=ISO] InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845
PROSITE:PS51140 SMART:SM00546 Pfam:PF02204 GO:GO:0005829
GO:GO:0005096 GO:GO:0043547 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 GO:GO:0006623 SUPFAM:SSF46934 eggNOG:NOG301606
EMBL:DQ665299 PIR:T40507 HSSP:Q9UJ41 OrthoDB:EOG4NW2VJ
NextBio:20802002 Uniprot:O74396
Length = 572
Score = 299 (110.3 bits), Expect = 7.6e-26, P = 7.6e-26
Identities = 87/286 (30%), Positives = 148/286 (51%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWAN 78
F+ FL+++R+ ++ + + +KSF+ F+ K +++F + I+ + WA+
Sbjct: 115 FHMFLEQLRSSSAEPVAKYLKSFLSEFTKRRWTVNYQVKLIRDFLKFINEKIEQYEPWAS 174
Query: 79 ATIEAIESAMEGLEKYVM----TKLFSRTFAST--------SEDVKIDQEISEKICLLQT 126
+ I++A EG+EK V+ T LFS A + S+DV+ D+ +SEK+ L Q
Sbjct: 175 GSQAEIDNAKEGMEKLVLNRLYTSLFSPEIAKSGIPLSSEHSDDVEEDRVLSEKMELFQ- 233
Query: 127 FLRPEHLDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISE 186
++ E+LDI + + LA EL++IN APR+K+ E
Sbjct: 234 WITEENLDIKKQKSSSKFFKLAADELRRINDYHAPRDKIICLLNCCKVIFSYLRNVVKEE 293
Query: 187 NVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
+ AD F+P+LI+++++A P L SNI++IQ +R L E YY + L+ A +FI
Sbjct: 294 S-----ADMFVPILIFVVLQARPAHLVSNIQYIQRFRSPEKLTGEVMYYLSTLMGAMSFI 348
Query: 247 LDLNAKSLSMEETEF----EKS---MQAARLANKV---TLIEESTT 282
L+ SL++ E EF EKS M+ +L+ K T + E+ T
Sbjct: 349 ETLDCSSLTITEEEFNAQIEKSIKKMEERKLSEKSESKTAVNENAT 394
>ASPGD|ASPL0000018244 [details] [associations]
symbol:AN3678 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845
PROSITE:PS51140 Pfam:PF02204 EMBL:BN001302 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 SUPFAM:SSF46934
EnsemblFungi:CADANIAT00005054 HOGENOM:HOG000192136 OMA:QYILRFR
Uniprot:C8V7N4
Length = 767
Score = 252 (93.8 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 64/181 (35%), Positives = 105/181 (58%)
Query: 109 EDVKIDQEISEKICLLQTFLRPEHLDIPTFLQNEASWL-LAEKELQKINALKAPREKVXX 167
EDV+ D+ +++K+ + +++R EHLDI + +L LA++EL KIN +APR+KV
Sbjct: 407 EDVERDEVLAQKM-RIYSWVREEHLDIAPVSSSGRRFLNLAQQELLKINGYRAPRDKVIC 465
Query: 168 XXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAM 227
A S+ AD F+P+LIY++++ANP L SNI++I +R Q
Sbjct: 466 ILNCCKVIFGLLRNAKKSDT----SADSFIPLLIYVVLQANPEHLVSNIQYILRFRNQEK 521
Query: 228 LVSEAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSMQAARLA----NKVTLIEESTTS 283
L EA YY ++L A FI L+ SL++ + EFE++++AA A N+ + + + TS
Sbjct: 522 LGGEAGYYLSSLSGAIQFIETLDRTSLTVSDEEFERNVEAAVSAIAEQNRASEVADPRTS 581
Query: 284 N 284
+
Sbjct: 582 S 582
Score = 106 (42.4 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 21/89 (23%), Positives = 48/89 (53%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWAN 78
F+ FL+++R+ + + + ++SF+ F K + +F + + + +W +
Sbjct: 286 FHRFLEQLRHRTADPVAKFLRSFLHEFGKRQWMVHEQVKIISDFLAFITNKMAACEVWRD 345
Query: 79 ATIEAIESAMEGLEKYVMTKLFSRTFAST 107
+ ++A EG+EK VM +L+++TF+ T
Sbjct: 346 VSDSEFDNAKEGMEKLVMNRLYTQTFSPT 374
>UNIPROTKB|E1C0P2 [details] [associations]
symbol:RABGEF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001933 "negative regulation
of protein phosphorylation" evidence=IEA] [GO:0002686 "negative
regulation of leukocyte migration" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0043305 "negative regulation of mast
cell degranulation" evidence=IEA] [GO:0046580 "negative regulation
of Ras protein signal transduction" evidence=IEA] [GO:0048261
"negative regulation of receptor-mediated endocytosis"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0060368 "regulation of Fc receptor
mediated stimulatory signaling pathway" evidence=IEA] [GO:1900165
"negative regulation of interleukin-6 secretion" evidence=IEA]
[GO:1900235 "negative regulation of Kit signaling pathway"
evidence=IEA] InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036
SMART:SM00259 Pfam:PF02204 GO:GO:0003677 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 CTD:27342 OMA:RYMSGQA
EMBL:AADN02025920 IPI:IPI00576946 RefSeq:XP_415796.2
UniGene:Gga.48513 UniGene:Gga.53522 Ensembl:ENSGALT00000004122
GeneID:417548 KEGG:gga:417548 NextBio:20820833 Uniprot:E1C0P2
Length = 491
Score = 282 (104.3 bits), Expect = 9.4e-24, P = 9.4e-24
Identities = 74/253 (29%), Positives = 135/253 (53%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F +FL P D+ + K F+ + + + + E + Q+F+ + ++ W
Sbjct: 142 FIEFLKTYHKPGQ-DIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKLQTR--W- 197
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E AM+ +EKY+MT+ + F T++D K D + ++I L ++ P+ L +P
Sbjct: 198 KVPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALH-WVTPQMLCVP 256
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 257 VNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 312
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 313 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 372
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 373 SLNLSQEDFDRFM 385
>ZFIN|ZDB-GENE-040426-813 [details] [associations]
symbol:rabgef1l "RAB guanine nucleotide exchange
factor (GEF) 1, like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 Pfam:PF02204 ZFIN:ZDB-GENE-040426-813 GO:GO:0003677
GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 eggNOG:NOG301606 HOGENOM:HOG000070180
HOVERGEN:HBG062584 OrthoDB:EOG42FSHP EMBL:BC045469 IPI:IPI00859614
RefSeq:NP_957235.1 UniGene:Dr.82264 ProteinModelPortal:Q7ZVP0
SMR:Q7ZVP0 GeneID:393915 KEGG:dre:393915 CTD:393915
NextBio:20814891 ArrayExpress:Q7ZVP0 Uniprot:Q7ZVP0
Length = 470
Score = 279 (103.3 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 79/256 (30%), Positives = 131/256 (51%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFNNA-NPENDGKRVQEFFTTMESAIKDHPLWA 77
F DFL + P D+ + +F + + E+ VQ+F+ +M ++ +
Sbjct: 135 FIDFLKPFQRPG-YDIFKQCHAFAENIAHKKVVGCEDLSDSVQDFYQSMSEYLQTN---F 190
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFAST-SEDVKIDQEISEKICLLQTFLRPEHLDIP 136
+ E +E+ ME +E+YVM +L+ + F ++D K D + ++I L ++ L +P
Sbjct: 191 KGSPEVVETVMEEVERYVMGRLYEQLFCPDHTDDEKKDLTVQKRIRALH-WVSIAMLCVP 249
Query: 137 TFLQNEA---SWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
Q S A+ +L +++ K P+EK+ + + A
Sbjct: 250 LDEQIPKVSDSVERAKTDLINLDSKKVPKEKLACVTRCSKHILTAIQGSKKAA----ASA 305
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP L+YII+KANPP+LHSNI++I Y + L+S E YYFTNL A +FI L+A+
Sbjct: 306 DDFLPALVYIILKANPPRLHSNIQYITRYCNPSRLMSGEDGYYFTNLCCAVSFIEKLDAQ 365
Query: 253 SLSMEETEFEKSMQAA 268
SL++ +FE+ M A
Sbjct: 366 SLNLSPEDFERYMSGA 381
>UNIPROTKB|F6Y7P9 [details] [associations]
symbol:RABGEF1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
Ensembl:ENSCAFT00000017144 Uniprot:F6Y7P9
Length = 492
Score = 279 (103.3 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 73/253 (28%), Positives = 134/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F DFL ++ + K F+ + + + + E + Q+F+ + ++
Sbjct: 143 FIDFLKTFHKTGQ-EIYKQTKMFLEAMHYKRDLSIEEQSECTQDFYQNVAERMQTR---G 198
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L ++ P+ L +P
Sbjct: 199 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVP 257
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ +E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 258 VNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 313
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 314 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 373
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 374 SLNLSQEDFDRYM 386
>UNIPROTKB|F1RJI2 [details] [associations]
symbol:LOC100516668 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:1900235 "negative regulation of Kit signaling
pathway" evidence=IEA] [GO:1900165 "negative regulation of
interleukin-6 secretion" evidence=IEA] [GO:0060368 "regulation of
Fc receptor mediated stimulatory signaling pathway" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048261 "negative regulation of receptor-mediated
endocytosis" evidence=IEA] [GO:0046580 "negative regulation of Ras
protein signal transduction" evidence=IEA] [GO:0043305 "negative
regulation of mast cell degranulation" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001933 "negative regulation
of protein phosphorylation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 OMA:RYMSGQA EMBL:FP340504
Ensembl:ENSSSCT00000008480 Uniprot:F1RJI2
Length = 492
Score = 279 (103.3 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 73/253 (28%), Positives = 134/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F +FL ++ + K F+ S + + + E + Q+F+ T+ ++
Sbjct: 143 FIEFLKTFHKTGQ-EIYKQTKMFLESMHYKRDLSIEEQSECTQDFYQTVAERMQTR---G 198
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L ++ P+ L +P
Sbjct: 199 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVP 257
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ E S ++ + ++ ++++ + PR+K+ +++N E A
Sbjct: 258 VNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KVTKN-EPASA 313
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 314 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 373
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 374 SLNLSQEDFDRYM 386
>UNIPROTKB|E2R706 [details] [associations]
symbol:RABGEF1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR000210 InterPro:IPR003131 Pfam:PF02214
SMART:SM00225 Pfam:PF02204 GO:GO:0051260 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 EMBL:AAEX03004190 EMBL:AAEX03004191
EMBL:AAEX03004192 Ensembl:ENSCAFT00000017144 OMA:INQRRAI
Uniprot:E2R706
Length = 700
Score = 279 (103.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 73/253 (28%), Positives = 134/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F DFL ++ + K F+ + + + + E + Q+F+ + ++
Sbjct: 351 FIDFLKTFHKTGQ-EIYKQTKMFLEAMHYKRDLSIEEQSECTQDFYQNVAERMQTR---G 406
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L ++ P+ L +P
Sbjct: 407 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVP 465
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ +E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 466 VNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 521
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 522 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 581
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 582 SLNLSQEDFDRYM 594
>ZFIN|ZDB-GENE-040426-1486 [details] [associations]
symbol:rabgef1 "RAB guanine nucleotide exchange
factor (GEF) 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 Pfam:PF02204
ZFIN:ZDB-GENE-040426-1486 GO:GO:0003677 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 CTD:27342 HOGENOM:HOG000070180
HOVERGEN:HBG062584 OrthoDB:EOG42FSHP OMA:RYMSGQA EMBL:AL935293
EMBL:BC061953 IPI:IPI00481337 RefSeq:NP_957137.1 UniGene:Dr.123825
UniGene:Dr.9342 SMR:Q6P6Y4 STRING:Q6P6Y4 Ensembl:ENSDART00000018977
Ensembl:ENSDART00000138243 GeneID:393816 KEGG:dre:393816
InParanoid:Q6P6Y4 NextBio:20814806 Uniprot:Q6P6Y4
Length = 502
Score = 274 (101.5 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 78/256 (30%), Positives = 132/256 (51%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN--NANPENDGKRVQEFFTTMESAIKDHPLW 76
F +FL + P ++ + ++FI S + + E + VQ+F+ M + +H
Sbjct: 151 FVEFLKTLHKPGR-EIHKHSRAFIDSMGNKKQDLSAEELSECVQDFYQGMSDRLLNH--- 206
Query: 77 ANATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLL-----QTFLRP 130
+ E ++ M+ +EKY+MT+L+ F TS+D K D +I L Q P
Sbjct: 207 FKGSSEKVDRVMDQVEKYIMTRLYKSVFCPETSDDEKKDLATQHRIRALHWVTIQMLCVP 266
Query: 131 EHLDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVEL 190
+IP + S + A ++ ++++ + PR+K+ +++N E
Sbjct: 267 VEEEIP---EVSDSVVKAITDIIEMDSKRVPRDKLACITSCSKHIFNAIR---VTKN-EP 319
Query: 191 GGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDL 249
ADDFLP LIYI++KANPP+L SNI++I + + L++ E YYFTNL A FI L
Sbjct: 320 ASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKL 379
Query: 250 NAKSLSMEETEFEKSM 265
+A+SL++ +FE+ M
Sbjct: 380 DAQSLNLSPEDFERYM 395
>UNIPROTKB|Q2TBX8 [details] [associations]
symbol:RABGEF1 "RABGEF1 protein" species:9913 "Bos taurus"
[GO:1900235 "negative regulation of Kit signaling pathway"
evidence=IEA] [GO:1900165 "negative regulation of interleukin-6
secretion" evidence=IEA] [GO:0060368 "regulation of Fc receptor
mediated stimulatory signaling pathway" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0048261 "negative regulation of receptor-mediated endocytosis"
evidence=IEA] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IEA] [GO:0043305 "negative regulation
of mast cell degranulation" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 IPI:IPI00691292 UniGene:Bt.317
HOVERGEN:HBG062584 OMA:RYMSGQA EMBL:DAAA02057950 EMBL:BC109491
SMR:Q2TBX8 STRING:Q2TBX8 Ensembl:ENSBTAT00000005011
InParanoid:Q2TBX8 Uniprot:Q2TBX8
Length = 491
Score = 271 (100.5 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 72/253 (28%), Positives = 133/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F +FL ++ + K F+ + + + + E + Q+F+ + ++
Sbjct: 142 FIEFLKTFHKTGQ-EIYKQTKLFLEAMHYKRDLSIEEQSECTQDFYQNVAERMQTR---G 197
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L ++ P+ L +P
Sbjct: 198 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVP 256
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 257 VNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 312
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 313 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 372
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 373 SLNLSQEDFDRYM 385
>UNIPROTKB|O18973 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9913
"Bos taurus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:1900235 "negative regulation of Kit
signaling pathway" evidence=IEA] [GO:1900165 "negative regulation
of interleukin-6 secretion" evidence=IEA] [GO:0060368 "regulation
of Fc receptor mediated stimulatory signaling pathway"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0048261 "negative regulation of
receptor-mediated endocytosis" evidence=IEA] [GO:0046580 "negative
regulation of Ras protein signal transduction" evidence=IEA]
[GO:0043305 "negative regulation of mast cell degranulation"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0002686
"negative regulation of leukocyte migration" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0046872 GO:GO:0003677 GO:GO:0015031
GO:GO:0008270 GO:GO:0006897 GO:GO:0055037 InterPro:IPR003123
PROSITE:PS51205 GO:GO:0005769 InterPro:IPR013995 SMART:SM00167
EMBL:AJ001119 IPI:IPI00691292 RefSeq:NP_777016.1 UniGene:Bt.317
PDB:2FID PDB:2FIF PDBsum:2FID PDBsum:2FIF ProteinModelPortal:O18973
SMR:O18973 DIP:DIP-29059N IntAct:O18973 STRING:O18973 PRIDE:O18973
GeneID:282335 KEGG:bta:282335 CTD:27342 eggNOG:NOG301606
HOGENOM:HOG000070180 HOVERGEN:HBG062584 InParanoid:O18973
OrthoDB:EOG42FSHP EvolutionaryTrace:O18973 NextBio:20806130
ArrayExpress:O18973 Uniprot:O18973
Length = 492
Score = 271 (100.5 bits), Expect = 9.5e-22, P = 9.5e-22
Identities = 72/253 (28%), Positives = 133/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F +FL ++ + K F+ + + + + E + Q+F+ + ++
Sbjct: 143 FIEFLKTFHKTGQ-EIYKQTKLFLEAMHYKRDLSIEEQSECTQDFYQNVAERMQTR---G 198
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L ++ P+ L +P
Sbjct: 199 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVP 257
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 258 VNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 313
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 314 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 373
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 374 SLNLSQEDFDRYM 386
>RGD|1307295 [details] [associations]
symbol:Rabgef1 "RAB guanine nucleotide exchange factor (GEF) 1"
species:10116 "Rattus norvegicus" [GO:0001933 "negative regulation
of protein phosphorylation" evidence=IEA;ISO] [GO:0002686 "negative
regulation of leukocyte migration" evidence=IEA;ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=IEA;ISO]
[GO:0033004 "negative regulation of mast cell activation"
evidence=ISO] [GO:0043305 "negative regulation of mast cell
degranulation" evidence=IEA;ISO] [GO:0046580 "negative regulation
of Ras protein signal transduction" evidence=IEA;ISO] [GO:0048261
"negative regulation of receptor-mediated endocytosis"
evidence=IEA;ISO] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA;ISO] [GO:0060368 "regulation of Fc receptor
mediated stimulatory signaling pathway" evidence=IEA;ISO]
[GO:1900165 "negative regulation of interleukin-6 secretion"
evidence=IEA;ISO] [GO:1900235 "negative regulation of Kit signaling
pathway" evidence=IEA;ISO] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 RGD:1307295 Pfam:PF02204
GO:GO:0003677 GO:GO:0008270 EMBL:CH473973 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 CTD:27342 RefSeq:NP_001101803.1
UniGene:Rn.21688 Ensembl:ENSRNOT00000001196 GeneID:360797
KEGG:rno:360797 NextBio:674129 Uniprot:G3V631
Length = 502
Score = 270 (100.1 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/253 (28%), Positives = 133/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F DFL ++ + K F+ + + + + E + Q+F+ + ++
Sbjct: 153 FIDFLKTFHKTGQ-EVYKQTKMFLEAMPYKRDLSIEEQSECTQDFYQNVAERLQTR---G 208
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EK++MT+L+ F T++D K D I ++I L ++ P+ L +P
Sbjct: 209 KVPPEKVEKMMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVP 267
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 268 VNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFNAI---KITKN-EPASA 323
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 324 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 383
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 384 SLNLSQEDFDRYM 396
>MGI|MGI:1929459 [details] [associations]
symbol:Rabgef1 "RAB guanine nucleotide exchange factor (GEF)
1" species:10090 "Mus musculus" [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IMP] [GO:0002686 "negative
regulation of leukocyte migration" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0031982 "vesicle" evidence=IDA] [GO:0033004
"negative regulation of mast cell activation" evidence=IMP]
[GO:0043305 "negative regulation of mast cell degranulation"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048261 "negative regulation of receptor-mediated
endocytosis" evidence=IMP] [GO:0050728 "negative regulation of
inflammatory response" evidence=IMP] [GO:0060368 "regulation of Fc
receptor mediated stimulatory signaling pathway" evidence=IDA;IMP]
[GO:1900165 "negative regulation of interleukin-6 secretion"
evidence=IMP] [GO:1900235 "negative regulation of Kit signaling
pathway" evidence=IMP] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 MGI:MGI:1929459 Pfam:PF02204
GO:GO:0046872 GO:GO:0003677 GO:GO:0015031 GO:GO:0050728
GO:GO:0008270 GO:GO:0006897 GO:GO:0002686 GO:GO:0055037
GO:GO:0004842 InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769
GO:GO:0031982 InterPro:IPR013995 SMART:SM00167 GO:GO:0048261
GO:GO:0001933 GO:GO:0046580 GO:GO:1900165 GO:GO:0043305
GO:GO:0060368 GeneTree:ENSGT00530000063341 CTD:27342
eggNOG:NOG301606 HOGENOM:HOG000070180 HOVERGEN:HBG062584
OrthoDB:EOG42FSHP EMBL:AF093590 EMBL:AK044568 EMBL:AK146734
EMBL:BC018229 IPI:IPI00124636 RefSeq:NP_001185988.1
RefSeq:NP_064367.1 UniGene:Mm.288639 ProteinModelPortal:Q9JM13
SMR:Q9JM13 STRING:Q9JM13 PhosphoSite:Q9JM13 PaxDb:Q9JM13
PRIDE:Q9JM13 Ensembl:ENSMUST00000026390 Ensembl:ENSMUST00000119797
GeneID:56715 KEGG:mmu:56715 UCSC:uc008zuf.2 InParanoid:Q9JM13
OMA:RYMSGQA NextBio:313183 Bgee:Q9JM13 CleanEx:MM_RABGEF1
Genevestigator:Q9JM13 GermOnline:ENSMUSG00000025340 GO:GO:1900235
Uniprot:Q9JM13
Length = 491
Score = 269 (99.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 72/253 (28%), Positives = 133/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F DFL ++ + K F+ + + + + E + Q+F+ + ++
Sbjct: 142 FIDFLKTFHKTGQ-EVYKQTKMFLEAMPYKRDLSIEEQSECTQDFYQNVAERMQTR---G 197
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EK++MT+L+ F T++D K D I ++I L ++ P+ L +P
Sbjct: 198 KVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVP 256
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
+ E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 257 VNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFNAI---KITKN-EPASA 312
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 313 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 372
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 373 SLNLSQEDFDRYM 385
>UNIPROTKB|E9PFK9 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 Pfam:PF02204 GO:GO:0003677
GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 EMBL:AC027644 HGNC:HGNC:17676 ChiTaRS:RABGEF1
IPI:IPI00004974 ProteinModelPortal:E9PFK9 SMR:E9PFK9 PRIDE:E9PFK9
Ensembl:ENST00000439720 ArrayExpress:E9PFK9 Bgee:E9PFK9
Uniprot:E9PFK9
Length = 504
Score = 268 (99.4 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 72/253 (28%), Positives = 132/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F +FL ++ + K F+ + + + E + Q+F+ + ++
Sbjct: 155 FIEFLKTFHKTGQ-EIYKQTKLFLEGMHYKRDLSIEEQSECAQDFYHNVAERMQTR---G 210
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L+ ++ P+ L +P
Sbjct: 211 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALR-WVTPQMLCVP 269
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 270 VNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 325
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 326 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 385
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 386 SLNLSQEDFDRYM 398
>UNIPROTKB|B4DZM7 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 Pfam:PF02204 GO:GO:0003677
GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 HOGENOM:HOG000070180 HOVERGEN:HBG062584 EMBL:AC027644
UniGene:Hs.530053 UniGene:Hs.709878 HGNC:HGNC:17676 ChiTaRS:RABGEF1
EMBL:AK303006 IPI:IPI00004974 SMR:B4DZM7 STRING:B4DZM7
Ensembl:ENST00000437078 UCSC:uc011kee.2 Uniprot:B4DZM7
Length = 505
Score = 268 (99.4 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 72/253 (28%), Positives = 132/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F +FL ++ + K F+ + + + E + Q+F+ + ++
Sbjct: 156 FIEFLKTFHKTGQ-EIYKQTKLFLEGMHYKRDLSIEEQSECAQDFYHNVAERMQTR---G 211
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L+ ++ P+ L +P
Sbjct: 212 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALR-WVTPQMLCVP 270
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 271 VNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 326
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 327 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 386
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 387 SLNLSQEDFDRYM 399
>SGD|S000004563 [details] [associations]
symbol:VPS9 "Guanine nucleotide exchange factor involved in
vacuolar transport" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000011 "vacuole
inheritance" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=IMP]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845 PROSITE:PS51140
SMART:SM00546 SGD:S000004563 Pfam:PF02204 GO:GO:0005829
EMBL:BK006946 GO:GO:0005085 GO:GO:0000011 EMBL:Z46660
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0006623 GO:GO:0043130 SUPFAM:SSF46934
GeneTree:ENSGT00530000063341 eggNOG:NOG301606 PDB:1P3Q PDBsum:1P3Q
OrthoDB:EOG4NW2VJ EMBL:U50142 EMBL:U20373 PIR:S49629
RefSeq:NP_013612.1 PDB:1MN3 PDBsum:1MN3 ProteinModelPortal:P54787
SMR:P54787 DIP:DIP-4526N IntAct:P54787 MINT:MINT-516456
STRING:P54787 PaxDb:P54787 PeptideAtlas:P54787 EnsemblFungi:YML097C
GeneID:854876 KEGG:sce:YML097C HOGENOM:HOG000141911 OMA:EDVCIAK
EvolutionaryTrace:P54787 NextBio:977816 Genevestigator:P54787
GermOnline:YML097C Uniprot:P54787
Length = 451
Score = 266 (98.7 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 80/269 (29%), Positives = 135/269 (50%)
Query: 19 FYDF---LDRMRNPASLDLVRSIKSFIVSFSFNNA--NPENDGKRVQEFFTTMESAIKDH 73
FYDF + +++ P + LV+ KSF+ +F + K + +F T + +
Sbjct: 60 FYDFQIFIKQLQTPGADPLVKYTKSFLRNFLAQRLLWTVSEEIKLISDFKTFIYDKFTLY 119
Query: 74 PLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSEDV---KIDQE----ISEKICLLQT 126
+ + + +A EG+EK +M KL+SR F+ + ++ +D E ++ LL+
Sbjct: 120 EPFRSLDNSKMRNAKEGMEKLIMGKLYSRCFSPSLYEILQKPLDDEHMKDLTNDDTLLEK 179
Query: 127 -----FLRPEHLDIPTFLQNEA--SWL-LAEKELQKINALKAPREKVXXXXXXXXXXXXX 178
F+ P LDIP + N ++ LA KEL KIN K+PR+K+
Sbjct: 180 IRHYRFISPIMLDIPDTMPNARLNKFVHLASKELGKINRFKSPRDKMVCVLNASKVIFGL 239
Query: 179 XXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTN 238
+ +N GAD F+PVLIY I+K L SN+ +I+ +R + E YY ++
Sbjct: 240 LKHTKLEQN----GADSFIPVLIYCILKGQVRYLVSNVNYIERFRSPDFIRGEEEYYLSS 295
Query: 239 LVSAKTFILDLNAKSLSMEETE-FEKSMQ 266
L +A FI++L +SL++E+ E FE++ Q
Sbjct: 296 LQAALNFIMNLTERSLTIEDHEDFEEAYQ 324
>UNIPROTKB|E7ERJ8 [details] [associations]
symbol:KCTD7 "BTB/POZ domain-containing protein KCTD7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002653
Pfam:PF01754 PROSITE:PS51036 SMART:SM00259 Pfam:PF02204
GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 HGNC:HGNC:21957 ChiTaRS:KCTD7
EMBL:AC027644 EMBL:AC006001 EMBL:AC079588 IPI:IPI00963967
ProteinModelPortal:E7ERJ8 SMR:E7ERJ8 Ensembl:ENST00000380828
ArrayExpress:E7ERJ8 Bgee:E7ERJ8 Uniprot:E7ERJ8
Length = 531
Score = 268 (99.4 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 72/253 (28%), Positives = 132/253 (52%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWA 77
F +FL ++ + K F+ + + + E + Q+F+ + ++
Sbjct: 182 FIEFLKTFHKTGQ-EIYKQTKLFLEGMHYKRDLSIEEQSECAQDFYHNVAERMQTR---G 237
Query: 78 NATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
E +E M+ +EKY+MT+L+ F T++D K D I ++I L+ ++ P+ L +P
Sbjct: 238 KVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALR-WVTPQMLCVP 296
Query: 137 TFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
E S ++ + ++ ++++ + PR+K+ I++N E A
Sbjct: 297 VNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASA 352
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
DDFLP LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+
Sbjct: 353 DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ 412
Query: 253 SLSMEETEFEKSM 265
SL++ + +F++ M
Sbjct: 413 SLNLSQEDFDRYM 425
>WB|WBGene00012644 [details] [associations]
symbol:rabx-5 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IGI]
[GO:0034058 "endosomal vesicle fusion" evidence=IMP] [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IGI]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0018996 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769 InterPro:IPR013995
SMART:SM00167 GO:GO:0032851 GeneTree:ENSGT00530000063341
EMBL:AL031633 eggNOG:NOG301606 GO:GO:0034058 RefSeq:NP_499337.3
ProteinModelPortal:Q8I100 SMR:Q8I100 IntAct:Q8I100 STRING:Q8I100
PaxDb:Q8I100 EnsemblMetazoa:Y39A1A.5 GeneID:176481
KEGG:cel:CELE_Y39A1A.5 UCSC:Y39A1A.5 CTD:176481 WormBase:Y39A1A.5
HOGENOM:HOG000021299 InParanoid:Q8I100 OMA:LSCALEF NextBio:892764
Uniprot:Q8I100
Length = 517
Score = 257 (95.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 75/268 (27%), Positives = 134/268 (50%)
Query: 19 FYDFL-DRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWA 77
F DFL + + ++ RS+K+ + S + ++ + V ++ + I H L+
Sbjct: 126 FTDFLVANLSTGMAQEIARSVKNAVNKISEMRMSSDDMSELVMSYYQYLGERIGGHSLFD 185
Query: 78 NATIEA-IESAMEGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
+ + +E M+ +EKY+ T +S F + E+ D + ++I L ++ L+
Sbjct: 186 SPDCKVKVEDVMDQVEKYISTFCYSIFFCANHEEEVADMSLQDRIRSLH-WVTAGFLETK 244
Query: 137 -TFLQNEASWLLAE--KELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
F + + E EL +INA ++ EK+ ++ E+ A
Sbjct: 245 MVFKKQTVRDKIDEAISELIEINAKRSAFEKLDCLTKSCKAIFE-----ALKESEASTSA 299
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
D+FLP LIY++ + NPP + SN+KFI + A L+S EAAY+FTNL A F ++N +
Sbjct: 300 DEFLPTLIYVLFRGNPPLIQSNVKFISRFAIPARLMSGEAAYFFTNLSCALEFARNMNHE 359
Query: 253 SLSMEETEFEKSMQAARLANKVTLIEES 280
SL ME++EFE + + LA +++I +
Sbjct: 360 SLQMEKSEFE-AYTSGHLAPPLSVINSA 386
Score = 40 (19.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 354 DVEKLLSVYKDVVRKY 369
D+EK+L+V K+ V Y
Sbjct: 425 DLEKMLAVIKETVDFY 440
>UNIPROTKB|Q8I100 [details] [associations]
symbol:rabx-5 "Protein RABX-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0018996 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769 InterPro:IPR013995
SMART:SM00167 GO:GO:0032851 GeneTree:ENSGT00530000063341
EMBL:AL031633 eggNOG:NOG301606 GO:GO:0034058 RefSeq:NP_499337.3
ProteinModelPortal:Q8I100 SMR:Q8I100 IntAct:Q8I100 STRING:Q8I100
PaxDb:Q8I100 EnsemblMetazoa:Y39A1A.5 GeneID:176481
KEGG:cel:CELE_Y39A1A.5 UCSC:Y39A1A.5 CTD:176481 WormBase:Y39A1A.5
HOGENOM:HOG000021299 InParanoid:Q8I100 OMA:LSCALEF NextBio:892764
Uniprot:Q8I100
Length = 517
Score = 257 (95.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 75/268 (27%), Positives = 134/268 (50%)
Query: 19 FYDFL-DRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWA 77
F DFL + + ++ RS+K+ + S + ++ + V ++ + I H L+
Sbjct: 126 FTDFLVANLSTGMAQEIARSVKNAVNKISEMRMSSDDMSELVMSYYQYLGERIGGHSLFD 185
Query: 78 NATIEA-IESAMEGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDIP 136
+ + +E M+ +EKY+ T +S F + E+ D + ++I L ++ L+
Sbjct: 186 SPDCKVKVEDVMDQVEKYISTFCYSIFFCANHEEEVADMSLQDRIRSLH-WVTAGFLETK 244
Query: 137 -TFLQNEASWLLAE--KELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGA 193
F + + E EL +INA ++ EK+ ++ E+ A
Sbjct: 245 MVFKKQTVRDKIDEAISELIEINAKRSAFEKLDCLTKSCKAIFE-----ALKESEASTSA 299
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAK 252
D+FLP LIY++ + NPP + SN+KFI + A L+S EAAY+FTNL A F ++N +
Sbjct: 300 DEFLPTLIYVLFRGNPPLIQSNVKFISRFAIPARLMSGEAAYFFTNLSCALEFARNMNHE 359
Query: 253 SLSMEETEFEKSMQAARLANKVTLIEES 280
SL ME++EFE + + LA +++I +
Sbjct: 360 SLQMEKSEFE-AYTSGHLAPPLSVINSA 386
Score = 40 (19.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 354 DVEKLLSVYKDVVRKY 369
D+EK+L+V K+ V Y
Sbjct: 425 DLEKMLAVIKETVDFY 440
>UNIPROTKB|Q9UJ41 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=IDA] InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036
SMART:SM00259 Pfam:PF02204 GO:GO:0046872 GO:GO:0003677
GO:GO:0015031 GO:GO:0008270 GO:GO:0006897 GO:GO:0055037
InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769 GO:GO:0017112
InterPro:IPR013995 SMART:SM00167 GermOnline:ENSG00000154710
PDB:2OT3 PDBsum:2OT3 CTD:27342 eggNOG:NOG301606
HOGENOM:HOG000070180 HOVERGEN:HBG062584 OrthoDB:EOG42FSHP
EMBL:AJ250042 EMBL:DQ230533 EMBL:DQ230534 EMBL:AK127790
EMBL:BT007107 EMBL:AK223329 EMBL:AC027644 EMBL:BC015330
IPI:IPI00418213 IPI:IPI00816003 IPI:IPI00924641 RefSeq:NP_055319.1
UniGene:Hs.530053 UniGene:Hs.709878 PDB:1TXU PDB:2C7M PDB:2C7N
PDBsum:1TXU PDBsum:2C7M PDBsum:2C7N ProteinModelPortal:Q9UJ41
SMR:Q9UJ41 DIP:DIP-29348N IntAct:Q9UJ41 MINT:MINT-1189235
STRING:Q9UJ41 PhosphoSite:Q9UJ41 DMDM:56405102 PRIDE:Q9UJ41
DNASU:27342 Ensembl:ENST00000284957 Ensembl:ENST00000450873
GeneID:27342 KEGG:hsa:27342 UCSC:uc003tvf.3 UCSC:uc003tvh.3
GeneCards:GC07P066205 HGNC:HGNC:17676 HPA:HPA001407 MIM:609700
neXtProt:NX_Q9UJ41 PharmGKB:PA134946532 ChiTaRS:RABGEF1
EvolutionaryTrace:Q9UJ41 GenomeRNAi:27342 NextBio:50418
ArrayExpress:Q9UJ41 CleanEx:HS_RABGEF1 Genevestigator:Q9UJ41
Uniprot:Q9UJ41
Length = 708
Score = 259 (96.2 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 64/189 (33%), Positives = 110/189 (58%)
Query: 82 EAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIPTFLQ 140
E +E M+ +EKY+MT+L+ F T++D K D I ++I L+ ++ P+ L +P
Sbjct: 419 ERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALR-WVTPQMLCVPVNED 477
Query: 141 -NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFL 197
E S ++ + ++ ++++ + PR+K+ I++N E ADDFL
Sbjct: 478 IPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAI---KITKN-EPASADDFL 533
Query: 198 PVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAKSLSM 256
P LIYI++K NPP+L SNI++I + + L++ E YYFTNL A FI L+A+SL++
Sbjct: 534 PTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNL 593
Query: 257 EETEFEKSM 265
+ +F++ M
Sbjct: 594 SQEDFDRYM 602
>FB|FBgn0262937 [details] [associations]
symbol:Rabex-5 "Rabaptin-5-associated exchange factor for
Rab5 ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007474 "imaginal
disc-derived wing vein specification" evidence=IMP] [GO:0035214
"eye-antennal disc development" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0005622 "intracellular" evidence=IC] [GO:0017112
"Rab guanyl-nucleotide exchange factor activity" evidence=IDA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 EMBL:AE014296 GO:GO:0003677 GO:GO:0007474
GO:GO:0008270 GO:GO:0040015 GO:GO:0031398 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 GO:GO:0035214
GeneTree:ENSGT00530000063341 eggNOG:NOG301606 EMBL:AY058763
RefSeq:NP_612093.1 UniGene:Dm.7401 SMR:Q9W0H9 MINT:MINT-969750
EnsemblMetazoa:FBtr0072663 GeneID:38144 KEGG:dme:Dmel_CG9139
UCSC:CG9139-RA CTD:38144 FlyBase:FBgn0262937 InParanoid:Q9W0H9
OMA:RCCRHIF OrthoDB:EOG4QZ621 GenomeRNAi:38144 NextBio:807171
Uniprot:Q9W0H9
Length = 696
Score = 258 (95.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 81/236 (34%), Positives = 125/236 (52%)
Query: 38 IKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMT 97
I+ ++ N N +D VQ +T + + + P + AT E +SA++ EK VMT
Sbjct: 163 IRKYMNGNGGKNINELSD--LVQNAYTKVSDIVHNDPSFEIATNEDRDSAIDFFEKVVMT 220
Query: 98 K----LFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDIPTF-LQNEASWLL--AEK 150
+ LFS F +T ED D ++ ++I L +++ +HLD + +EA L+ A
Sbjct: 221 QNHKFLFSPYF-TTDEDS--DVKVQKRIRQL-SWITAKHLDCSIDEVNSEARDLVYNAIS 276
Query: 151 ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPP 210
EL I++ +P+EK+ A+ ADDFLP LI++++KANP
Sbjct: 277 ELVGIDSYYSPQEKLQCTWRCCRHIFELLKRATGGP----ASADDFLPALIFVVLKANPV 332
Query: 211 QLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSM 265
+LHSNI F+ + + L+S E+ YYFTNL SA FI +LN +SL + EFE M
Sbjct: 333 RLHSNINFVTRFTNASRLMSGESGYYFTNLCSAIAFIENLNGESLGVSSEEFEALM 388
>UNIPROTKB|E1C268 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0032794 "GTPase activating protein binding" evidence=IEA]
[GO:0051223 "regulation of protein transport" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0005829 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005085
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0051223 Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341
OMA:HSYPERL EMBL:AADN02026317 IPI:IPI00583672
Ensembl:ENSGALT00000001466 Uniprot:E1C268
Length = 1440
Score = 254 (94.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/214 (30%), Positives = 106/214 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYV 95
+ I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ V
Sbjct: 1225 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSV 1283
Query: 96 MTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKEL 152
M ++F F + D+ DQ + E I L + H L IP EA W A+ E+
Sbjct: 1284 MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEI 1343
Query: 153 QKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQL 212
+ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP L
Sbjct: 1344 RTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPCL 1400
Query: 213 HSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + L E +Y++ +A FI
Sbjct: 1401 LSTVQYISSFYANC-LSGEESYWWMQFTAAVEFI 1433
>UNIPROTKB|F8W9S7 [details] [associations]
symbol:GAPVD1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0007165 GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350
GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10 EMBL:AL627223
EMBL:AL354710 HGNC:HGNC:23375 ChiTaRS:GAPVD1 IPI:IPI00946050
ProteinModelPortal:F8W9S7 SMR:F8W9S7 Ensembl:ENST00000394083
ArrayExpress:F8W9S7 Bgee:F8W9S7 Uniprot:F8W9S7
Length = 1412
Score = 253 (94.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 65/214 (30%), Positives = 106/214 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYV 95
+ I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ V
Sbjct: 1197 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSV 1255
Query: 96 MTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKEL 152
M ++F F + D+ DQ + E I L + H L IP EA W A+ E+
Sbjct: 1256 MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEI 1315
Query: 153 QKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQL 212
+ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP L
Sbjct: 1316 RTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPCL 1372
Query: 213 HSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + L E +Y++ +A FI
Sbjct: 1373 LSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1405
>UNIPROTKB|A5D794 [details] [associations]
symbol:GAPVD1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:9913 "Bos taurus" [GO:0051223
"regulation of protein transport" evidence=ISS] [GO:0032794 "GTPase
activating protein binding" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0016020 "membrane" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616
PROSITE:PS50018 Pfam:PF02204 GO:GO:0005829 GO:GO:0007165
GO:GO:0016020 GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350
GO:GO:0005768 GO:GO:0051056 GO:GO:0006897 GO:GO:0005085
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0051223 Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0032794
EMBL:BC140474 IPI:IPI00704893 RefSeq:NP_001095990.1
UniGene:Bt.20982 ProteinModelPortal:A5D794 PRIDE:A5D794
Ensembl:ENSBTAT00000015341 GeneID:539646 KEGG:bta:539646 CTD:26130
eggNOG:NOG275317 GeneTree:ENSGT00530000063341 HOGENOM:HOG000038022
HOVERGEN:HBG107936 OMA:HSYPERL NextBio:20878130 Uniprot:A5D794
Length = 1413
Score = 253 (94.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 65/214 (30%), Positives = 106/214 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYV 95
+ I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ V
Sbjct: 1198 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSV 1256
Query: 96 MTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKEL 152
M ++F F + D+ DQ + E I L + H L IP EA W A+ E+
Sbjct: 1257 MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLKEAPWPSAQSEI 1316
Query: 153 QKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQL 212
+ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP L
Sbjct: 1317 RTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPCL 1373
Query: 213 HSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + L E +Y++ +A FI
Sbjct: 1374 LSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1406
>RGD|1307479 [details] [associations]
symbol:Gapvd1 "GTPase activating protein and VPS9 domains 1"
species:10116 "Rattus norvegicus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0007165
"signal transduction" evidence=IEA] [GO:0032794 "GTPase activating
protein binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0051223 "regulation
of protein transport" evidence=ISO] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 RGD:1307479
Pfam:PF02204 GO:GO:0005829 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005085
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0051223 Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341
OrthoDB:EOG4548XR IPI:IPI00949820 Ensembl:ENSRNOT00000066961
UCSC:RGD:1307479 ArrayExpress:D4A022 Uniprot:D4A022
Length = 1463
Score = 253 (94.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 65/214 (30%), Positives = 106/214 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYV 95
+ I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ V
Sbjct: 1248 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSV 1306
Query: 96 MTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKEL 152
M ++F F + D+ DQ + E I L + H L IP EA W A+ E+
Sbjct: 1307 MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEI 1366
Query: 153 QKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQL 212
+ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP L
Sbjct: 1367 RTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPCL 1423
Query: 213 HSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + L E +Y++ +A FI
Sbjct: 1424 LSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1456
>UNIPROTKB|Q14C86 [details] [associations]
symbol:GAPVD1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0032794 "GTPase activating
protein binding" evidence=IMP] [GO:0051223 "regulation of protein
transport" evidence=IMP] InterPro:IPR001936 InterPro:IPR008936
Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204 GO:GO:0005829
GO:GO:0007165 GO:GO:0016020 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0005768 EMBL:CH471090 GO:GO:0051056
GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10
PROSITE:PS00509 GO:GO:0032794 CTD:26130 eggNOG:NOG275317
HOVERGEN:HBG107936 OMA:HSYPERL EMBL:DQ233254 EMBL:AB040954
EMBL:AL627223 EMBL:AL354710 EMBL:BC013635 EMBL:BC021119
EMBL:BC114937 EMBL:BC114962 EMBL:AK000126 EMBL:AL080196
EMBL:AL834325 IPI:IPI00292753 IPI:IPI00302156 IPI:IPI00852719
IPI:IPI00873087 IPI:IPI00883910 IPI:IPI00888069 PIR:T12506
RefSeq:NP_056450.2 UniGene:Hs.495134 ProteinModelPortal:Q14C86
SMR:Q14C86 IntAct:Q14C86 MINT:MINT-1631145 STRING:Q14C86
DMDM:172046859 PaxDb:Q14C86 PRIDE:Q14C86 Ensembl:ENST00000265956
Ensembl:ENST00000297933 Ensembl:ENST00000312123
Ensembl:ENST00000394104 Ensembl:ENST00000394105
Ensembl:ENST00000470056 Ensembl:ENST00000495955 GeneID:26130
KEGG:hsa:26130 UCSC:uc004bpp.3 UCSC:uc004bpq.3 UCSC:uc004bpr.3
UCSC:uc004bps.3 UCSC:uc010mwx.3 UCSC:uc010mwy.1
GeneCards:GC09P128024 H-InvDB:HIX0008383 HGNC:HGNC:23375
HPA:HPA029386 HPA:HPA029387 MIM:611714 neXtProt:NX_Q14C86
PharmGKB:PA142671748 ChiTaRS:GAPVD1 GenomeRNAi:26130 NextBio:48153
PMAP-CutDB:Q14C86 ArrayExpress:Q14C86 Bgee:Q14C86
Genevestigator:Q14C86 Uniprot:Q14C86
Length = 1478
Score = 253 (94.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 65/214 (30%), Positives = 106/214 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYV 95
+ I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ V
Sbjct: 1263 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSV 1321
Query: 96 MTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKEL 152
M ++F F + D+ DQ + E I L + H L IP EA W A+ E+
Sbjct: 1322 MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEI 1381
Query: 153 QKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQL 212
+ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP L
Sbjct: 1382 RTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPCL 1438
Query: 213 HSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + L E +Y++ +A FI
Sbjct: 1439 LSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1471
>UNIPROTKB|A2RV61 [details] [associations]
symbol:gapvd1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:8355 "Xenopus laevis"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0032794
"GTPase activating protein binding" evidence=ISS] [GO:0051223
"regulation of protein transport" evidence=ISS] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005768 GO:GO:0051056
GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10
PROSITE:PS00509 GO:GO:0032794 CTD:26130 HOVERGEN:HBG107936
EMBL:BC133191 RefSeq:NP_001091308.1 UniGene:Xl.19818
ProteinModelPortal:A2RV61 PRIDE:A2RV61 GeneID:100037133
KEGG:xla:100037133 Xenbase:XB-GENE-997392 Uniprot:A2RV61
Length = 1452
Score = 252 (93.8 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 63/212 (29%), Positives = 104/212 (49%)
Query: 38 IKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMT 97
I FI F A + + V+EF ++ A+ +W NA+ E ++ A +E+ +M
Sbjct: 1239 IHEFIQDFQKLTAADDKTAQ-VEEFLQSLYGAMAQDVIWQNASEEQLQDAQIAIERSIMN 1297
Query: 98 KLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQK 154
++F F + D+ DQ + E I L + H L IP EA W A+ E++
Sbjct: 1298 RIFKLAFNPNQDADILRDQVLHEHIKRLSKVVTANHRALQIPEVYLREAPWPSAQTEIRT 1357
Query: 155 INALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLHS 214
I+A K PR+KV S++ + GADDF+PVL++++IKANP L S
Sbjct: 1358 ISAYKTPRDKVQCILRMCSTIMNLL---SLANEYSVPGADDFVPVLVFVLIKANPTYLLS 1414
Query: 215 NIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
+++I + L+ E +Y++ +A FI
Sbjct: 1415 TVQYISSFYSNR-LIGEESYWWMQFTAAVEFI 1445
>UNIPROTKB|E2RA13 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10
GeneTree:ENSGT00530000063341 EMBL:AAEX03006882
Ensembl:ENSCAFT00000032152 Uniprot:E2RA13
Length = 1460
Score = 252 (93.8 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 65/214 (30%), Positives = 106/214 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYV 95
+ I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ V
Sbjct: 1245 KKIREFIHDFQQLTAADDKTAQ-VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSV 1303
Query: 96 MTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKEL 152
M ++F F + D+ DQ + E I L + H L IP EA W A+ E+
Sbjct: 1304 MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEI 1363
Query: 153 QKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQL 212
+ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP L
Sbjct: 1364 RTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPCL 1420
Query: 213 HSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + L E +Y++ +A FI
Sbjct: 1421 LSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1453
>MGI|MGI:1913941 [details] [associations]
symbol:Gapvd1 "GTPase activating protein and VPS9 domains 1"
species:10090 "Mus musculus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;IMP] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005622 "intracellular" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=ISO;IDA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO;IMP]
[GO:0050790 "regulation of catalytic activity" evidence=IMP]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051223 "regulation of protein
transport" evidence=ISO;IMP] InterPro:IPR001936 InterPro:IPR008936
Pfam:PF00616 PROSITE:PS50018 MGI:MGI:1913941 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005768 GO:GO:0051056
GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10
PROSITE:PS00509 EMBL:AL929106 GO:GO:0032794 CTD:26130
eggNOG:NOG275317 GeneTree:ENSGT00530000063341 HOVERGEN:HBG107936
OMA:HSYPERL ChiTaRS:GAPVD1 EMBL:EF155419 EMBL:AK129381
EMBL:AK014474 EMBL:AK088851 EMBL:AK003521 EMBL:AK134776
EMBL:AK150026 EMBL:AK165047 EMBL:AL845262 EMBL:BC031478
EMBL:BC043715 EMBL:BC048847 EMBL:BC057164 EMBL:BC060123
IPI:IPI00406596 IPI:IPI00889216 IPI:IPI00889225 IPI:IPI00889231
IPI:IPI00889244 IPI:IPI00889253 RefSeq:NP_079985.2
UniGene:Mm.156452 UniGene:Mm.393397 ProteinModelPortal:Q6PAR5
SMR:Q6PAR5 STRING:Q6PAR5 PhosphoSite:Q6PAR5 PaxDb:Q6PAR5
PRIDE:Q6PAR5 Ensembl:ENSMUST00000028224 Ensembl:ENSMUST00000102800
Ensembl:ENSMUST00000113099 GeneID:66691 KEGG:mmu:66691
UCSC:uc008jiq.1 UCSC:uc008jir.1 UCSC:uc012bug.1 InParanoid:Q6PAR5
OrthoDB:EOG4548XR NextBio:322389 Bgee:Q6PAR5 CleanEx:MM_GAPVD1
Genevestigator:Q6PAR5 Uniprot:Q6PAR5
Length = 1458
Score = 249 (92.7 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 64/214 (29%), Positives = 105/214 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYV 95
+ I+ FI F A + + V++F + + +W NA+ E ++ A +E+ V
Sbjct: 1243 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSV 1301
Query: 96 MTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKEL 152
M ++F F + D+ DQ + E I L + H L IP EA W A+ E+
Sbjct: 1302 MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEI 1361
Query: 153 QKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQL 212
+ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP L
Sbjct: 1362 RTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPCL 1418
Query: 213 HSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + L E +Y++ +A FI
Sbjct: 1419 LSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1451
>UNIPROTKB|F1RS34 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051223 "regulation of protein transport" evidence=IEA]
[GO:0032794 "GTPase activating protein binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0005096 "GTPase
activator activity" evidence=IEA] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005085 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 GO:GO:0051223
Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341 OMA:HSYPERL
EMBL:CU929944 EMBL:FP312771 Ensembl:ENSSSCT00000006160
Uniprot:F1RS34
Length = 1478
Score = 249 (92.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 65/215 (30%), Positives = 106/215 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGK-RVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKY 94
+ I+ FI F +D +V++F + A+ +W NA+ E ++ A +E+
Sbjct: 1262 KKIREFIQG-DFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERS 1320
Query: 95 VMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKE 151
VM ++F F + D+ DQ + E I L + H L IP EA W A+ E
Sbjct: 1321 VMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSE 1380
Query: 152 LQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQ 211
++ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP
Sbjct: 1381 IRTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPC 1437
Query: 212 LHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
L S +++I + L E +Y++ +A FI
Sbjct: 1438 LLSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1471
>UNIPROTKB|E2RA33 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10
GeneTree:ENSGT00530000063341 EMBL:AAEX03006882
Ensembl:ENSCAFT00000032150 Uniprot:E2RA33
Length = 1416
Score = 248 (92.4 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 65/215 (30%), Positives = 106/215 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGK-RVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKY 94
+ I+ FI F +D +V++F + A+ +W NA+ E ++ A +E+
Sbjct: 1200 KKIREFIHG-DFQQLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERS 1258
Query: 95 VMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKE 151
VM ++F F + D+ DQ + E I L + H L IP EA W A+ E
Sbjct: 1259 VMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSE 1318
Query: 152 LQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQ 211
++ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP
Sbjct: 1319 IRTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPC 1375
Query: 212 LHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
L S +++I + L E +Y++ +A FI
Sbjct: 1376 LLSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1409
>UNIPROTKB|E2RA32 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10
GeneTree:ENSGT00530000063341 OMA:HSYPERL EMBL:AAEX03006882
Ensembl:ENSCAFT00000032151 Uniprot:E2RA32
Length = 1480
Score = 248 (92.4 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 65/215 (30%), Positives = 106/215 (49%)
Query: 36 RSIKSFIVSFSFNNANPENDGK-RVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKY 94
+ I+ FI F +D +V++F + A+ +W NA+ E ++ A +E+
Sbjct: 1264 KKIREFIHG-DFQQLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERS 1322
Query: 95 VMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKE 151
VM ++F F + D+ DQ + E I L + H L IP EA W A+ E
Sbjct: 1323 VMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSE 1382
Query: 152 LQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQ 211
++ I+A K PR+KV A+ ++V GADDF+PVL++++IKANPP
Sbjct: 1383 IRTISAYKTPRDKVQCILRMCSTIMNLLSLAN-EDSVP--GADDFVPVLVFVLIKANPPC 1439
Query: 212 LHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
L S +++I + L E +Y++ +A FI
Sbjct: 1440 LLSTVQYISSFYASC-LSGEESYWWMQFTAAVEFI 1473
>ZFIN|ZDB-GENE-040718-117 [details] [associations]
symbol:gapvd1 "GTPase activating protein and VPS9
domains 1" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616
PROSITE:PS50018 Pfam:PF02204 ZFIN:ZDB-GENE-040718-117 GO:GO:0007165
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056
GO:GO:0005622 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341
EMBL:BX005399 EMBL:BX511073 IPI:IPI00920790
Ensembl:ENSDART00000112854 Uniprot:E7F237
Length = 1472
Score = 236 (88.1 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 65/219 (29%), Positives = 107/219 (48%)
Query: 34 LVRSIKSFIVSF--SFNNANPENDGKR-VQEFFTTMESAIKDHPLWANATIEAIESAMEG 90
L+ ++S ++ F +F +D V++F + A+ +W A+ E ++ A
Sbjct: 1251 LLEHMESKMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMAHDAIWQYASEEQLQDAQMA 1310
Query: 91 LEKYVMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLL 147
+E+ VM ++F F + D+ D+ E I L + H L IP EA W
Sbjct: 1311 IERSVMNRIFKLAFYPNQDGDIHRDELFHEHIQRLSRVVSANHKALQIPEVYLKEAPWPS 1370
Query: 148 AEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKA 207
A+ E++ INA K PR+KV A+ E+ + GADDF+PVL++++IKA
Sbjct: 1371 AQAEIKTINAYKTPRDKVQCILRMCSTIMNLLSLAN--EDA-VPGADDFVPVLVFVLIKA 1427
Query: 208 NPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
NPP L S I++I + + L E Y++ +A FI
Sbjct: 1428 NPPCLLSTIQYINNFYA-SRLSGEECYWWMQFTAAVEFI 1465
>DICTYBASE|DDB_G0271844 [details] [associations]
symbol:DDB_G0271844 "Rho GTPase domain containing
protein" species:44689 "Dictyostelium discoideum" [GO:0035091
"phosphatidylinositol binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007154 "cell communication" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001683
InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071 Pfam:PF00787
PROSITE:PS50195 PROSITE:PS51421 SMART:SM00312
dictyBase:DDB_G0271844 Pfam:PF02204 GO:GO:0005525 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 EMBL:AAFI02000006 GO:GO:0035091
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
Gene3D:3.30.1520.10 SUPFAM:SSF64268 eggNOG:NOG301606
RefSeq:XP_645538.1 ProteinModelPortal:Q55AI4
EnsemblProtists:DDB0233291 GeneID:8618167 KEGG:ddi:DDB_G0271844
InParanoid:Q55AI4 OMA:ENIDAKQ Uniprot:Q55AI4
Length = 1603
Score = 234 (87.4 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 68/244 (27%), Positives = 120/244 (49%)
Query: 37 SIKSFIVSFSFNNANPEND-GKRVQEFFTTMESAIKDHPLWAN--------ATIEAIESA 87
S+ FI F + ++ + + F M++ I+ + ++++ + IE +A
Sbjct: 1177 SVDDFIKGFLKKKSQSQDALAEMILSFMREMKTKIQSNQIYSSIPSNLLMDSNIEEDITA 1236
Query: 88 --MEGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDIPTFLQNEASW 145
+ +E Y+ ++ F ST + ++ D +SE++ L F+ P+HL+I ++ W
Sbjct: 1237 PPLAEIENYLYQTVYKIVF-STPDTLERDTLLSERMSKL-VFVEPKHLEISPIHCDKDLW 1294
Query: 146 LLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIII 205
A++ELQ +N L +P +K+ +S + GGADDFLP LIY++I
Sbjct: 1295 FTAQQELQALNELYSPSQKLECVLKCCKIILFL-----LSNSDSPGGADDFLPHLIYVVI 1349
Query: 206 KANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSM 265
AN P L SN +FI + Q L E YY T A TF+ +++AK L ++ E+ M
Sbjct: 1350 HANVPNLCSNFEFISKFCSQDQLKMERYYYLTTFGIAVTFLENIDAKQLKIDPDEYNAYM 1409
Query: 266 QAAR 269
+
Sbjct: 1410 SGKK 1413
>CGD|CAL0006139 [details] [associations]
symbol:orf19.5533 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] [GO:0000011 "vacuole inheritance" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845 PROSITE:PS51140
CGD:CAL0006139 Pfam:PF02204 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 EMBL:AACQ01000034
EMBL:AACQ01000033 SUPFAM:SSF46934 eggNOG:NOG301606
RefSeq:XP_719097.1 RefSeq:XP_719214.1 ProteinModelPortal:Q5AC17
GeneID:3639113 GeneID:3639221 KEGG:cal:CaO19.12979
KEGG:cal:CaO19.5533 Uniprot:Q5AC17
Length = 765
Score = 230 (86.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 78/271 (28%), Positives = 128/271 (47%)
Query: 19 FYDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDG--KRVQEFFTTMESAIKDHPLW 76
F FL ++R ++ +VR I+SF+ SF +D K + +F M + +
Sbjct: 342 FQTFLVQLRKKSADPIVRYIRSFLSSFIRQGHTFTSDQRIKIISDFKIFMNEKFTLYEPF 401
Query: 77 ANATIEAIESAMEGLEKYVMTKLFSRTF---------ASTSEDVKIDQEISEKICL-LQT 126
A+ +E++ EGLEK +M +L F + E +D + E L L+
Sbjct: 402 ASMDQIDLENSREGLEKLIMNRLHDLCFPPEVVKQNLSYIPEPYTLDLQKDESFALQLEK 461
Query: 127 F--LRPEHLDIPT------FLQNEASWL-LAEKELQKINALKAPREKVXXXXXXXXXXXX 177
F + HLDI ++N+ S+L A EL KIN +APR+K+
Sbjct: 462 FSWINGNHLDIDMNDLANKIVKNDQSFLEYAITELNKINNYRAPRDKIICILNACKIIFS 521
Query: 178 XXXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLV-SEAAYYF 236
+ N AD F+P+LI +I KA L SNI +I+ +R Q L+ E +YY
Sbjct: 522 YLKLSKQETN-----ADSFIPILILVIFKAKTDHLISNIHYIENFRGQEWLLHGETSYYL 576
Query: 237 TNLVSAKTFILDLNAKSLSMEETEFEKSMQA 267
+++ A FI ++ A+ L++ + EF+ M+A
Sbjct: 577 SSIQGAVEFIQNITAEDLTISQAEFDAHMEA 607
>UNIPROTKB|A8WVM4 [details] [associations]
symbol:rme-6 "Receptor-mediated endocytosis protein 6"
species:6238 "Caenorhabditis briggsae" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0032794 "GTPase activating
protein binding" evidence=ISS] [GO:0051223 "regulation of protein
transport" evidence=ISS] InterPro:IPR001936 InterPro:IPR008936
Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204 GO:GO:0005829
GO:GO:0007165 GO:GO:0016020 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0006897 GO:GO:0030136
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10 PROSITE:PS00509
GO:GO:0032794 eggNOG:NOG275317 EMBL:HE600974 RefSeq:XP_002643315.1
ProteinModelPortal:A8WVM4 EnsemblMetazoa:CBG04130 GeneID:8585309
KEGG:cbr:CBG04130 CTD:8585309 WormBase:CBG04130
HOGENOM:HOG000154147 OMA:VETEHRR Uniprot:A8WVM4
Length = 1104
Score = 207 (77.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 35 VRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKY 94
V ++ F F F A+ E + +Q T + + + W AT I AM +E++
Sbjct: 890 VVAVGKFYSEFKFLQAHDER-AEFLQNLLTYLRERLMQNYDWNFATESMIARAMTTMERF 948
Query: 95 VMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKE 151
VM ++ F E D K D+ + I + + P H L IP L EA W A+ E
Sbjct: 949 VMFAVYEIAFWPNREMDQKKDKLLQSVIGKASSSVTPVHEALKIPEHLLGEAPWPSAQAE 1008
Query: 152 LQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQ 211
L ++ +EK+ +S +N + ADD PVL+++IIKANP
Sbjct: 1009 LSMLDNYVTAQEKLNCLVRCCDVINNLVALSS--KNA-VASADDLTPVLVFVIIKANPRS 1065
Query: 212 LHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
L SN++FI+ + + AYY+ N SA +I
Sbjct: 1066 LLSNLQFIETFAGDQIESGRDAYYWVNFKSAVEYI 1100
>DICTYBASE|DDB_G0272038 [details] [associations]
symbol:rgfA "Vps9 domain-containing protein RgfA"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0272038 Pfam:PF02204 EMBL:AAFI02000007
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
RefSeq:XP_645360.1 ProteinModelPortal:Q55AA6
EnsemblProtists:DDB0234180 GeneID:8618249 KEGG:ddi:DDB_G0272038
eggNOG:NOG281184 InParanoid:Q55AA6 Uniprot:Q55AA6
Length = 715
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 53/177 (29%), Positives = 94/177 (53%)
Query: 80 TIEAIESAM-EGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDIPTF 138
+I IE + E +E+Y+ ++L+ R F+S E ++ D + E I Q + P +LDI
Sbjct: 407 SINEIEIIIYEFMEQYIASRLYRRIFSS-QEAIQKDTLLCEHISRFQ-HITPSNLDINDS 464
Query: 139 LQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLP 198
+ + ++EL I+ K+PREK+ + V GAD LP
Sbjct: 465 IISTQFLEQIQEELLYISIFKSPREKLMCIKKSFKLLFQLLSKTQLPSVV---GADLLLP 521
Query: 199 VLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLS 255
++I+ +IK+N P L SN++FI L+R ++ SE Y+ +++A +FI ++ +SL+
Sbjct: 522 IVIFCLIKSNLPFLWSNLQFISLFRDPTLIESETNYFLVTMITAASFIENMTFESLT 578
>DICTYBASE|DDB_G0275413 [details] [associations]
symbol:DDB_G0275413 "DUF726 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016021 "integral to membrane" evidence=IEA]
dictyBase:DDB_G0275413 Pfam:PF02204 GO:GO:0016021 EMBL:AAFI02000013
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
eggNOG:NOG280803 InterPro:IPR007941 PANTHER:PTHR17920 Pfam:PF05277
ProtClustDB:CLSZ2846849 RefSeq:XP_643686.2
ProteinModelPortal:Q553T5 PRIDE:Q553T5 EnsemblProtists:DDB0234182
GeneID:8619953 KEGG:ddi:DDB_G0275413 InParanoid:Q553T5 OMA:CRHISKG
Uniprot:Q553T5
Length = 1268
Score = 197 (74.4 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 80/306 (26%), Positives = 143/306 (46%)
Query: 89 EGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDI-PTFLQNEASWLL 147
E +E ++ +++ + F D+++ I ++ ++ DI PT L + +W
Sbjct: 326 EAIESLILIQIYGQIFPINKSK---DKQLKSIIQYVKQLPINDYSDIDPTKLSS-VNWEA 381
Query: 148 AEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENV-ELG--GADDFLPVLIYII 204
A +L IN +APR+K+ IS+ + + G GAD+F+ LIY+
Sbjct: 382 AIADLSLINLYEAPRDKIVCILRSCRH---------ISKGLNKFGTFGADEFIGYLIYLT 432
Query: 205 IKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAK------SLSMEE 258
++ NP L+SN+KFI+L+R +VSE YYF +L A + L+ N K S EE
Sbjct: 433 VQTNPSYLYSNLKFIELFRASDFMVSEEGYYFISLKMASDY-LESNFKDKYFKSSFYQEE 491
Query: 259 TEFEKSMQAARLANKVTLIEESTTSNGIKTLGEQGHPERHDVTRI---EASAMSNDRKSL 315
E +K ++ + NK IE + +GE + + + ++I E++ SN++
Sbjct: 492 QEQQKLQFSSSILNKSIGIENNENFINNVIVGENNNDDGENFSQIPIIESNQTSNNQPIE 551
Query: 316 EEQRRVGPSQRIYGN---NTITS--GGYGYPFMEAEASRLTTGDVEKLLSVYKDVVRKYT 370
+V SQ + N + I S GG G + + + D ++LL +D+V
Sbjct: 552 SPIMKV--SQEVLNNPLMDFINSKDGGGGGDDDDNDDNLYEVDDSDELL--IQDIVDHAD 607
Query: 371 NLCRAV 376
+ R +
Sbjct: 608 EILRII 613
>DICTYBASE|DDB_G0291115 [details] [associations]
symbol:DDB_G0291115 "vacuolar sorting protein 9
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
dictyBase:DDB_G0291115 Pfam:PF02204 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005622
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
EMBL:AAFI02000175 eggNOG:NOG275317 RefSeq:XP_635406.1
ProteinModelPortal:Q54F48 EnsemblProtists:DDB0233768 GeneID:8627990
KEGG:ddi:DDB_G0291115 InParanoid:Q54F48 OMA:ARPENIL Uniprot:Q54F48
Length = 1918
Score = 196 (74.1 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 54/189 (28%), Positives = 96/189 (50%)
Query: 57 KRVQEFFTTMESAIKDHPLW--ANATIEAIESAMEGLEKYVMTKLFSRTFASTSEDVKID 114
K ++ F ++ + + P W +N T + A LE+ ++T++++ TF + ED+
Sbjct: 1678 KTIKSFIQRAKNEMTNSPWWNMSNTTDDEFSIATNTLERNLLTQIYNFTFNISKEDLTFS 1737
Query: 115 QEISEKICLLQTFLRPEH-LDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXX 173
+++ K F +H L I ++A W LA++E++KIN K+P++K+
Sbjct: 1738 KDLISK------FSSIDHGLLIAEKYSSQAPWELAQQEIKKINLYKSPQDKMKCIIDTWN 1791
Query: 174 XXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAA 233
S G DDFLP++ Y+IIKA P + SNI++I+LY L ++
Sbjct: 1792 IIFNYTKPFGSS------GPDDFLPIMGYVIIKARPENILSNIQYIELYSE---LNDDSE 1842
Query: 234 YYFTNLVSA 242
+F NL S+
Sbjct: 1843 IWFMNLKSS 1851
>WB|WBGene00004377 [details] [associations]
symbol:rme-6 species:6239 "Caenorhabditis elegans"
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0051056 "regulation of small
GTPase mediated signal transduction" evidence=IEA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:2000369 "regulation
of clathrin-mediated endocytosis" evidence=IMP] [GO:0017137 "Rab
GTPase binding" evidence=IPI] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IGI] [GO:0032851 "positive
regulation of Rab GTPase activity" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0005886 GO:GO:0007165 GO:GO:0005096
SUPFAM:SSF48350 GO:GO:0018996 GO:GO:0006897 GO:GO:2000369
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 GO:GO:0032851
Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0045334 GO:GO:0032794
eggNOG:NOG275317 GeneTree:ENSGT00530000063341 HOGENOM:HOG000154147
OMA:VETEHRR EMBL:AY750054 EMBL:FO080361 PIR:T25788 PIR:T31057
RefSeq:NP_508208.2 UniGene:Cel.22673 ProteinModelPortal:Q9GYH7
SMR:Q9GYH7 DIP:DIP-25631N IntAct:Q9GYH7 MINT:MINT-1116995
STRING:Q9GYH7 PaxDb:Q9GYH7 PRIDE:Q9GYH7 EnsemblMetazoa:F49E7.1a
GeneID:180463 KEGG:cel:CELE_F49E7.1 UCSC:F49E7.1a CTD:180463
WormBase:F49E7.1a WormBase:F49E7.1b InParanoid:Q9GYH7
NextBio:909496 Uniprot:Q9GYH7
Length = 1093
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 55/215 (25%), Positives = 96/215 (44%)
Query: 35 VRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKY 94
V ++ F F + A E + ++ T + + + W AT + AM +E+Y
Sbjct: 879 VTAVLKFYDEFKYLRAQDER-AEFLKNLLTFLRDRLMQNVDWNFATDTMMSRAMTTIERY 937
Query: 95 VMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRP--EHLDIPTFLQNEASWLLAEKE 151
V+ ++ F + D D+ + I + + P + L IP L EA W A+ E
Sbjct: 938 VIFAVYDNAFYPNRDADHHRDKLLRGTIAKVSDVVTPVNDFLKIPEHLHGEAPWPSAQAE 997
Query: 152 LQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQ 211
L ++ ++K+ +S +N + ADD PVL+++IIKANP
Sbjct: 998 LSMLDIYVTAQDKLNCVVRCCDVINNLVALSS--KNA-VASADDLTPVLVFVIIKANPRA 1054
Query: 212 LHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
L SN++F++ + + AYY+ N SA +I
Sbjct: 1055 LLSNVQFVETFAGDRIESGRDAYYWVNFKSAVEYI 1089
>UNIPROTKB|Q9GYH7 [details] [associations]
symbol:rme-6 "Receptor-mediated endocytosis protein 6"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0051223 "regulation of protein transport"
evidence=ISS] [GO:0032794 "GTPase activating protein binding"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0005829 GO:GO:0005886 GO:GO:0007165
GO:GO:0005096 SUPFAM:SSF48350 GO:GO:0018996 GO:GO:0006897
GO:GO:2000369 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
GO:GO:0005769 InterPro:IPR013995 SMART:SM00167 GO:GO:0051223
GO:GO:0032851 Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0045334
GO:GO:0032794 eggNOG:NOG275317 GeneTree:ENSGT00530000063341
HOGENOM:HOG000154147 OMA:VETEHRR EMBL:AY750054 EMBL:FO080361
PIR:T25788 PIR:T31057 RefSeq:NP_508208.2 UniGene:Cel.22673
ProteinModelPortal:Q9GYH7 SMR:Q9GYH7 DIP:DIP-25631N IntAct:Q9GYH7
MINT:MINT-1116995 STRING:Q9GYH7 PaxDb:Q9GYH7 PRIDE:Q9GYH7
EnsemblMetazoa:F49E7.1a GeneID:180463 KEGG:cel:CELE_F49E7.1
UCSC:F49E7.1a CTD:180463 WormBase:F49E7.1a WormBase:F49E7.1b
InParanoid:Q9GYH7 NextBio:909496 Uniprot:Q9GYH7
Length = 1093
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 55/215 (25%), Positives = 96/215 (44%)
Query: 35 VRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKY 94
V ++ F F + A E + ++ T + + + W AT + AM +E+Y
Sbjct: 879 VTAVLKFYDEFKYLRAQDER-AEFLKNLLTFLRDRLMQNVDWNFATDTMMSRAMTTIERY 937
Query: 95 VMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRP--EHLDIPTFLQNEASWLLAEKE 151
V+ ++ F + D D+ + I + + P + L IP L EA W A+ E
Sbjct: 938 VIFAVYDNAFYPNRDADHHRDKLLRGTIAKVSDVVTPVNDFLKIPEHLHGEAPWPSAQAE 997
Query: 152 LQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQ 211
L ++ ++K+ +S +N + ADD PVL+++IIKANP
Sbjct: 998 LSMLDIYVTAQDKLNCVVRCCDVINNLVALSS--KNA-VASADDLTPVLVFVIIKANPRA 1054
Query: 212 LHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
L SN++F++ + + AYY+ N SA +I
Sbjct: 1055 LLSNVQFVETFAGDRIESGRDAYYWVNFKSAVEYI 1089
>FB|FBgn0030286 [details] [associations]
symbol:CG1657 species:7227 "Drosophila melanogaster"
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0051056 "regulation
of small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0005829 GO:GO:0007165 GO:GO:0016020
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 EMBL:AE014298
GO:GO:0051056 GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 GO:GO:0051223
Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0032794 eggNOG:NOG275317
GeneTree:ENSGT00530000063341 InterPro:IPR024767 Pfam:PF12871
EMBL:AY061391 EMBL:EU706774 EMBL:EU706775 EMBL:EU706776
EMBL:EU706777 EMBL:EU706778 EMBL:EU706779 EMBL:EU706780
EMBL:EU706781 EMBL:EU706782 EMBL:EU706783 EMBL:EU706784
EMBL:EU706785 EMBL:EU706786 EMBL:EU706787 EMBL:EU706788
RefSeq:NP_572704.1 UniGene:Dm.132 ProteinModelPortal:Q9VZ08
SMR:Q9VZ08 PaxDb:Q9VZ08 EnsemblMetazoa:FBtr0073448 GeneID:32070
KEGG:dme:Dmel_CG1657 UCSC:CG1657-RA FlyBase:FBgn0030286
InParanoid:Q9VZ08 OMA:IISDTWS OrthoDB:EOG4KKWHS PhylomeDB:Q9VZ08
ChiTaRS:CG1657 GenomeRNAi:32070 NextBio:776661 Bgee:Q9VZ08
Uniprot:Q9VZ08
Length = 1712
Score = 188 (71.2 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 61/213 (28%), Positives = 103/213 (48%)
Query: 38 IKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIE-AIESAMEGLEKYVM 96
++ F F+ A+ E + +EF +ES +++ A+ E +++A +E+ ++
Sbjct: 1502 LEQFQAEFAQLRASDERV-ELTEEF---VESLLQELRSSADLQDEWQVDAARVAIERMLL 1557
Query: 97 TKLFSRT-FASTSEDVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQ 153
+++ + F + DV D+ +S I LQ F+ P H L I EA W A+++L
Sbjct: 1558 EQMYEQVMFPNEDADVSRDEVLSAHIGKLQRFVHPAHPALCIAQEYLGEAPWTFAQQQLC 1617
Query: 154 KINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLH 213
+ A K PREK+ +S + ADD LPVLIY++I ANPP L
Sbjct: 1618 HMAAYKTPREKLQCIINCISSIMSLLRMSS----GRVPAADDLLPVLIYVVIMANPPYLL 1673
Query: 214 SNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
S +++I + + L E +Y+T S FI
Sbjct: 1674 STVEYISCFLGKK-LEGEDEFYWTLFGSVVKFI 1705
>UNIPROTKB|Q29HW3 [details] [associations]
symbol:GA14078 "Receptor-mediated endocytosis protein 6
homolog" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0032794
"GTPase activating protein binding" evidence=ISS] [GO:0051223
"regulation of protein transport" evidence=ISS] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0006897
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 GO:GO:0051223 EMBL:CH379064 Gene3D:1.10.506.10
PROSITE:PS00509 GO:GO:0032794 eggNOG:NOG275317 InterPro:IPR024767
Pfam:PF12871 OrthoDB:EOG4KKWHS RefSeq:XP_001354590.2 GeneID:4814905
KEGG:dpo:Dpse_GA14078 FlyBase:FBgn0074109 InParanoid:Q29HW3
Uniprot:Q29HW3
Length = 1774
Score = 181 (68.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 51/166 (30%), Positives = 80/166 (48%)
Query: 84 IESAMEGLEKYVMTKLFSRT-FASTSEDVKIDQEISEKICLLQTFLRPEH--LDIPTFLQ 140
+++A E +E+ ++ ++ + F + DV D +S I LQ F+ P H L I
Sbjct: 1607 VDAAREAIERMLLELMYQQVMFPNEDADVSRDTVLSAHIGKLQRFVHPAHPALCIAQEYL 1666
Query: 141 NEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVL 200
EA W A+++L + A K PREK+ + + ADD LPVL
Sbjct: 1667 GEAPWTFAQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSC----GRVPAADDLLPVL 1722
Query: 201 IYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
IY++I ANPP L S +++I + + L E +Y+T S FI
Sbjct: 1723 IYVVIMANPPYLLSTVEYISCFLGRK-LDGENEFYWTLFGSVVKFI 1767
Score = 43 (20.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 28 NPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWAN--ATIEAIE 85
N + + L ++ K S SF+N+N N K +Q A++ P AN A I
Sbjct: 478 NRSLMRLGKAKKKLANSMSFSNSN-SNSNKNLQP-------AVEQLPPLANGQANSSNIS 529
Query: 86 SAMEG-LEK 93
SA G LE+
Sbjct: 530 SASNGDLEQ 538
>SGD|S000005991 [details] [associations]
symbol:MUK1 "Cytoplasmic protein of unknown function
containing a Vps9 domain" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0043547 "positive
regulation of GTPase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005096 "GTPase activator activity" evidence=IEA]
SGD:S000005991 Pfam:PF02204 GO:GO:0005737 GO:GO:0005096
GO:GO:0043547 EMBL:BK006949 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 EMBL:U41849 PIR:S61116
RefSeq:NP_015255.1 ProteinModelPortal:Q02866 DIP:DIP-1326N
IntAct:Q02866 MINT:MINT-401237 STRING:Q02866 PaxDb:Q02866
PeptideAtlas:Q02866 EnsemblFungi:YPL070W GeneID:856035
KEGG:sce:YPL070W CYGD:YPL070w eggNOG:NOG40653 HOGENOM:HOG000000992
OMA:DDLKQPK OrthoDB:EOG4FV07T NextBio:980965 Genevestigator:Q02866
GermOnline:YPL070W Uniprot:Q02866
Length = 612
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 194 DDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKS 253
DD+L +LIY II P + N +FI+L+R + LV ++ TNL +A F+ L
Sbjct: 353 DDYLSLLIYYIITIVPRDIFLNAEFIRLFRYKKKLVETESFALTNLEAALVFVEGLTKND 412
Query: 254 LSME--------ETEF-EKSMQA-ARLANKVTLIEESTTSNGIKTLGEQGHP--ERHDVT 301
S E E++ E S+ + L +K ++ ++ +NG LG+ P +R DVT
Sbjct: 413 FSNELQDKLTVNESKILENSISSRVSLPSKTAIMHKNNGNNG-SNLGDIVTPTIQRPDVT 471
Query: 302 R 302
R
Sbjct: 472 R 472
>UNIPROTKB|Q96NW4 [details] [associations]
symbol:ANKRD27 "Ankyrin repeat domain-containing protein
27" species:9606 "Homo sapiens" [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0045022 "early endosome to late endosome
transport" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005764 "lysosome" evidence=IDA]
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 Pfam:PF02204 GO:GO:0005096 GO:GO:0043547
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005764 GO:GO:0005085
GO:GO:0045022 InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769
EMBL:AL136784 EMBL:AK054561 EMBL:BC050529 EMBL:AF447882
EMBL:AL834335 IPI:IPI00102377 RefSeq:NP_115515.2 UniGene:Hs.59236
PDB:4B93 PDBsum:4B93 ProteinModelPortal:Q96NW4 SMR:Q96NW4
IntAct:Q96NW4 MINT:MINT-1198049 STRING:Q96NW4 PhosphoSite:Q96NW4
DMDM:125987706 PaxDb:Q96NW4 PRIDE:Q96NW4 DNASU:84079
Ensembl:ENST00000306065 GeneID:84079 KEGG:hsa:84079 UCSC:uc002ntn.1
CTD:84079 GeneCards:GC19M033087 HGNC:HGNC:25310 HPA:HPA042769
neXtProt:NX_Q96NW4 PharmGKB:PA134893411 HOGENOM:HOG000033958
HOVERGEN:HBG080845 InParanoid:Q96NW4 OMA:CLFKHIA OrthoDB:EOG48PMJG
ChiTaRS:ANKRD27 GenomeRNAi:84079 NextBio:73299 Bgee:Q96NW4
CleanEx:HS_ANKRD27 Genevestigator:Q96NW4 InterPro:IPR013995
SMART:SM00167 Uniprot:Q96NW4
Length = 1050
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 51/220 (23%), Positives = 97/220 (44%)
Query: 66 MESAIKDHPLWANATIEAIESAM-EGLEKYVMTKLFSRTFASTSEDVKIDQEISEKICLL 124
++ ++D L A EA + M + +E YV ++++ F + KI
Sbjct: 186 LQQLLRDSHLKMLAKQEAQMNLMKQAVEIYVHHEIYNLIFKYVGTMEASEDAAFNKITRS 245
Query: 125 QTFLRPEHLDI-PTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXAS 183
L+ + + + P F N A++EL ++N +P++K+ S
Sbjct: 246 LQDLQQKDIGVKPEFSFNIPR---AKRELAQLNKCTSPQQKLVCLRKVVQLITQS---PS 299
Query: 184 ISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAK 243
N+E ADD L VL+Y+++K P +N+ +I+ +R ++ E Y T+ +A
Sbjct: 300 QRVNLETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSLAKDELGYCLTSFEAAI 359
Query: 244 TFILDLNAKSLSMEETEFEKSMQAARLANKVTLIEESTTS 283
+I SLS + E E L +++L+ + T+S
Sbjct: 360 EYI---RQGSLSAKPPESEGFGDRLFLKQRMSLLSQMTSS 396
>ASPGD|ASPL0000000759 [details] [associations]
symbol:AN5920 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF02204 EMBL:BN001301 InterPro:IPR003123 PROSITE:PS51205
EMBL:AACD01000101 OrthoDB:EOG4FV07T eggNOG:NOG261946
RefSeq:XP_663524.1 ProteinModelPortal:Q5B0L0
EnsemblFungi:CADANIAT00007113 GeneID:2870989 KEGG:ani:AN5920.2
HOGENOM:HOG000163647 OMA:GETAYCL Uniprot:Q5B0L0
Length = 698
Score = 118 (46.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 52/208 (25%), Positives = 92/208 (44%)
Query: 86 SAMEGLEKYVMTKLFSRTFA--STSEDVKIDQEISEKICLLQTFLRPEHL--DIPTFLQN 141
S E +E+ V ++ + + ST ++V+ ++ S+ LL + L DI +
Sbjct: 196 SLEEAVERRVCESIYDKIWRHKSTLDEVRDEKLRSKTAALLLVGINLNELGVDIDITAID 255
Query: 142 EAS-------WLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGAD 194
E S + A L K+N + P K+ S + AD
Sbjct: 256 EKSQKDADDCFSTARDSLMKMNEERYPLGKLRHLAASHKAIVDALTKLLPSSS----SAD 311
Query: 195 DFLPVLIYIIIKANPPQLH--SNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAK 252
+ LP LIY ++ P ++ SN+ FIQ +R + + E AY TNL +A +F+ +++
Sbjct: 312 EILPALIYTLVTCPPEGINVISNLLFIQRFRTSSKVNGETAYCLTNLEAAISFLENVDLS 371
Query: 253 SLSMEETEFEKSMQAARLANKVTLIEES 280
L EE + E ++A +N+ + ES
Sbjct: 372 ELRAEEGQ-EGGVKAP--SNEPASLAES 396
Score = 47 (21.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 342 FMEAE-ASRLTTGDVEKLLSVYKDV 365
F++ + A+ LT GDV LL YK +
Sbjct: 662 FLDIQTANELTIGDVSVLLDDYKRI 686
>ZFIN|ZDB-GENE-030131-7043 [details] [associations]
symbol:si:ch211-85n16.4 "si:ch211-85n16.4"
species:7955 "Danio rerio" [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788
PROSITE:PS50001 PROSITE:PS50200 SMART:SM00252 SMART:SM00314
Pfam:PF02204 ZFIN:ZDB-GENE-030131-7043 GO:GO:0007165
Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GeneTree:ENSGT00530000063053
EMBL:AL929341 Ensembl:ENSDART00000151057 Bgee:I3IRW3 Uniprot:I3IRW3
Length = 824
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00080
Identities = 45/223 (20%), Positives = 98/223 (43%)
Query: 34 LVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDH-----PLWANATIEAIESAM 88
LV+ SF+ +++ ++ + +++F T M++ +K P+ + + I+ +
Sbjct: 469 LVQDYVSFVQENKNCHSSSQDLLQTIRQFMTQMKAYLKQSSEMNPPIESYMPEDQIDPVL 528
Query: 89 E-GLEKYVMTKLFSRTFASTSE---DVKIDQEISEKICLLQTFLRPEHLDIPTFLQNEAS 144
E + K V+ L+ ++ E + Q + E + + +T RP L + +
Sbjct: 529 EKAMHKCVLKPLYGCLHSALHEFQAAAGVWQTLQENLAIAKT-KRPNELGVNGAQAPDTH 587
Query: 145 WLLA-EKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYI 203
+ ++L+ + ++ +P K+ V + GADDFLP+L Y+
Sbjct: 588 AIQRIRRKLRAMCSMYSPERKIMVLLKVCKLIYSIMQ----EHEVRMFGADDFLPMLTYV 643
Query: 204 IIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 246
+++ + PQL + I ++ +L E YY T+ A + I
Sbjct: 644 LVQCDMPQLDTEILYMMELIDPPLLHGEGGYYLTSAYGAMSLI 686
>UNIPROTKB|F1PYJ6 [details] [associations]
symbol:ANKRD27 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045022 "early endosome to late
endosome transport" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 Pfam:PF02204 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005764
GO:GO:0005085 GO:GO:0045022 InterPro:IPR003123 PROSITE:PS51205
GO:GO:0005769 OMA:CLFKHIA InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00690000102232 EMBL:AAEX03001065 EMBL:AAEX03001066
EMBL:AAEX03001067 EMBL:AAEX03001068 EMBL:AAEX03001069
Ensembl:ENSCAFT00000012075 Uniprot:F1PYJ6
Length = 1044
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 56/253 (22%), Positives = 110/253 (43%)
Query: 36 RSIKSFIVSF-SFNNANPENDGKRVQEFFTT-MESAIKDHPLWANATIEAIESAM-EGLE 92
RSI SF +F + V +T ++ ++D L A EA + + + +E
Sbjct: 154 RSIASFQRTFRECERKSLRQHIDSVNALYTKCLQQLLRDSHLKMLAKQEAQMNLLKQAVE 213
Query: 93 KYVMTKLFSRTFASTSEDVKIDQEISEKICLLQTFLRPEHLDIPTFLQNEASWLL--AEK 150
YV ++ F + KI L+ + + + + E S+ + A++
Sbjct: 214 MYVQHDIYDLIFKYVGTMEASEDAAFNKITRSLQDLQQKDIGV----KPECSFNIPRAKR 269
Query: 151 ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPP 210
EL ++N +P++K+ S N+E ADD L VL+Y+++K + P
Sbjct: 270 ELAQLNKCTSPQQKLICLRKVVQLITQS---PSQRVNLETMCADDLLSVLLYLLVKTDIP 326
Query: 211 QLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSMQAARL 270
+N+ +I+ +R + E Y T++ +A +I SLS++ E E L
Sbjct: 327 NWMANLSYIKNFRFSSSAKDELGYCLTSIEAAIEYI---RQGSLSVKPPESEGFGDRLFL 383
Query: 271 ANKVTLIEESTTS 283
+++L+ + T++
Sbjct: 384 KQRMSLLSQMTST 396
>UNIPROTKB|F1RNY3 [details] [associations]
symbol:ANKRD27 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045022 "early endosome to late endosome transport"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
Pfam:PF02204 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005764 GO:GO:0005085
GO:GO:0045022 InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769
OMA:CLFKHIA InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00690000102232 EMBL:FP340461 EMBL:FP312769
EMBL:FP102642 Ensembl:ENSSSCT00000003160 Uniprot:F1RNY3
Length = 1056
Score = 128 (50.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 52/228 (22%), Positives = 99/228 (43%)
Query: 59 VQEFFTT-MESAIKDHPLWANATIEAIESAM-EGLEKYVMTKLFSRTFASTSEDVKIDQE 116
V +T ++ ++D L A EA + M + +E YV ++ F +
Sbjct: 178 VNALYTKCLQQLLRDSHLKVLAKQEAQMNLMKQAVEMYVQHDIYDLVFKYVGTMEASEDA 237
Query: 117 ISEKICLLQTFLRPEHLDI-PTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXX 175
KI L+ + + + P F N A++EL ++N +P++K+
Sbjct: 238 AFNKITRSLQDLQQKDIGVKPEFSFNIPR---AKRELAQLNRCSSPQQKLACLRKVVQLI 294
Query: 176 XXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYY 235
S N+E ADD L VL+Y+++K P +N+ +I+ +R + E Y
Sbjct: 295 TQS---PSQRVNLETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSSAKDELGYC 351
Query: 236 FTNLVSAKTFILDLNAKSLSMEETEFEKSMQAARLANKVTLIEESTTS 283
T++ +A +I SLS++ E E L +++L+ + T++
Sbjct: 352 LTSIEAAIEYI---RQGSLSVKPPESEGFGDRLFLKQRMSLLSQMTST 396
Score = 37 (18.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 391 FEGNNSSFKQPATKTSASTDS 411
FE S + PA STDS
Sbjct: 622 FEKRQKSSEVPARPPKGSTDS 642
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.358 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 415 386 0.00092 117 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 607 (65 KB)
Total size of DFA: 220 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.27u 0.11s 32.38t Elapsed: 00:00:01
Total cpu time: 32.28u 0.11s 32.39t Elapsed: 00:00:01
Start: Thu May 9 18:13:30 2013 End: Thu May 9 18:13:31 2013