BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014962
(415 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/418 (84%), Positives = 388/418 (92%), Gaps = 3/418 (0%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KF+LGGTP+KVLYHSESRLL+VMRTEL+ DT SSDICCVDPLSGSVLSSF
Sbjct: 880 MVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSF 939
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLELGETGKSMELVRV +EQVLV+GTSLSSGPA+MPSGEAESTKGRLIVLC+EHMQNSD
Sbjct: 940 KLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLEHMQNSDS 999
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPFREIVGYA EQLS SSLCSSPDD SCDG++LEE+E WQLRLA
Sbjct: 1000 GSMTFCSKAGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLA 1059
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+ TWPGMVLAICPYLDRYFLASAGN+FYVCGFPNDNPQRVRRFAVGRTRFMIM LTAHF
Sbjct: 1060 YTATWPGMVLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFMIMSLTAHF 1119
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDG++FYSYHED+RKLEQ+YCDP QRLVADC+LMDVDTAVVSDRKGSIAVLS
Sbjct: 1120 TRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLS 1179
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS---FESSQT 357
CS+ LEDNASPECNLT NC+Y+MGEIA+SI+KGSF YKLPADD L C S + S+
Sbjct: 1180 CSNHLEDNASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSEN 1239
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
+I+A TLLGSI++ IPIS EE+ELLEAVQARLA+H LTAP+LGNDH+EFRSREN VRK
Sbjct: 1240 SIMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHNEFRSRENSVRK 1297
>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
Length = 1387
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/427 (81%), Positives = 385/427 (90%), Gaps = 16/427 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KF+LGGTP+KVLYHSESRLL+VMRTEL+ DT SSDICCVDPLSGSVLSSF
Sbjct: 894 MVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSF 953
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLELGETGKSMELVRV +EQVLV+GTSLSSGPA+MPSGEAESTKGRLIVLC+EHMQNSD
Sbjct: 954 KLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLEHMQNSDS 1013
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPFREIVGYA EQLS SSLCSSPDD SCDG++LEE+E WQLRLA
Sbjct: 1014 GSMTFCSKAGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLA 1073
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+ TWPGMVLAICPYLDRYFLASAGN+FYVCGFPNDNPQRVRRFAVGRTRFMIM LTAHF
Sbjct: 1074 YTATWPGMVLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFMIMSLTAHF 1133
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDG++FYSYHED+RKLEQ+YCDP QRLVADC+LMDVDTAVVSDRKGSIAVLS
Sbjct: 1134 TRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLS 1193
Query: 301 CSDRLE-------------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD 347
CS+ LE DNASPECNLT NC+Y+MGEIA+SI+KGSF YKLPADD L
Sbjct: 1194 CSNHLEELHGFKFLIISCPDNASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKG 1253
Query: 348 CLAS---FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
C S + S+ +I+A TLLGSI++ IPIS EE+ELLEAVQARLA+H LTAP+LGNDH+
Sbjct: 1254 CDGSNTIIDFSENSIMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHN 1313
Query: 405 EFRSREN 411
EFRSREN
Sbjct: 1314 EFRSREN 1320
>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 1376
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/416 (83%), Positives = 379/416 (91%), Gaps = 3/416 (0%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLNV+KFHLGGTP+KVLYHSES+LL+VMRT+L NDT SSDICCVDPLSGS+LSS
Sbjct: 897 MVHTKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQLINDTSSSDICCVDPLSGSILSSH 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLE+GETGKSMELVR G+EQVLVVGTSLSSGPAIM SGEAESTKGRLIVLC+EH+QNSD
Sbjct: 957 KLEIGETGKSMELVRNGNEQVLVVGTSLSSGPAIMASGEAESTKGRLIVLCLEHVQNSDT 1016
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAG SS + SPFREIVGYATEQLSSSSLCSSPDDAS DGIKLEETE WQLR+
Sbjct: 1017 GSMTFCSKAGLSSLQASPFREIVGYATEQLSSSSLCSSPDDASSDGIKLEETEAWQLRVV 1076
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
YST+ PGMVLAICPYLDRYFLASAGNAFYVCGFPND+ QRV+RFAVGRTRFMI LTAH
Sbjct: 1077 YSTSLPGMVLAICPYLDRYFLASAGNAFYVCGFPNDSFQRVKRFAVGRTRFMITSLTAHV 1136
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RIAVGDCRDGILF+SY EDA+KLEQIY DPSQRLVADC L+DVDTAVVSDRKGSIA+LS
Sbjct: 1137 NRIAVGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILS 1196
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCL---ASFESSQT 357
CSDRLEDNASPECNLT NCAY+MGEIA+++RKGSF YKLPADD L C + F+SS
Sbjct: 1197 CSDRLEDNASPECNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCAVPGSDFDSSHN 1256
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
TIIASTLLGSIVIF P+S +EYELLEAVQA+LA+HPLT+P+LGNDH E+RSRENP+
Sbjct: 1257 TIIASTLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENPI 1312
>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1220
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/418 (82%), Positives = 378/418 (90%), Gaps = 4/418 (0%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KFHLGGTP+KVLYHSESRLL+VMRTEL+NDTCSSDICCVDPLSGSV+SSF
Sbjct: 798 MVHSKRLNVQKFHLGGTPRKVLYHSESRLLLVMRTELSNDTCSSDICCVDPLSGSVVSSF 857
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLE GETGKSMELVRVG EQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLC+EH+Q+SD
Sbjct: 858 KLEHGETGKSMELVRVGTEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCLEHLQSSDS 917
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPF E+VGY EQLSSSSL S D SCDG+KLEE+E WQLRLA
Sbjct: 918 GSMTFCSKAGSSSQRTSPFCEVVGYTAEQLSSSSL-CSSPDDSCDGVKLEESEAWQLRLA 976
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+T WPGM L ICPYLDRYFLASAG+AFYVCGFPNDNPQRVR+FA+ RTRF I+ LTAHF
Sbjct: 977 YATKWPGMALTICPYLDRYFLASAGSAFYVCGFPNDNPQRVRKFAIARTRFTIISLTAHF 1036
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDGILFYSYHED RKLEQ+YCDPSQRLVADC+L+DVDTAVVSDRKGSIAVLS
Sbjct: 1037 TRIAVGDCRDGILFYSYHEDTRKLEQVYCDPSQRLVADCILLDVDTAVVSDRKGSIAVLS 1096
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA---SFESSQT 357
CS E NASPECNLT CAY+MGEIA+SIRKGSF Y+LPADD L A + +S
Sbjct: 1097 CSGDSERNASPECNLTLTCAYYMGEIAMSIRKGSFSYRLPADDMLMGYDAVTPNNYASHN 1156
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
TI+ASTLLGSI+IFIP++ EE+ELLEAVQARL +HPLTAP+LGNDHSEFRSRENPVRK
Sbjct: 1157 TIMASTLLGSIIIFIPLTREEHELLEAVQARLVVHPLTAPILGNDHSEFRSRENPVRK 1214
>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1384
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/428 (74%), Positives = 362/428 (84%), Gaps = 17/428 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KFHLGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 892 MVHSKRRNAQKFHLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 950
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGRLI+LC+EH QNSD
Sbjct: 951 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRLIILCLEHTQNSDS 1010
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKAGSSSQRTSPFR++VGY TEQLSSSS CSSPDD S DGIK +E ETWQLRLA
Sbjct: 1011 GSMTICSKAGSSSQRTSPFRDVVGYTTEQLSSSSHCSSPDDNSYDGIKFDEAETWQLRLA 1070
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
+TTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1071 SATTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1130
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1131 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1190
Query: 301 CSDRLE--------------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
C D E + +SPE NL NCAY+MGEIA++I+KG IYKLPADD L
Sbjct: 1191 CQDHSEFGTKHLAFSPRDDPEYSSPESNLNLNCAYYMGEIAMAIKKGCNIYKLPADDVLR 1250
Query: 347 D--CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
S +++ TIIA TLLGSI +F PISSEEYELLEAVQA+L IHPLTAP+LGNDH+
Sbjct: 1251 SYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEEYELLEAVQAKLGIHPLTAPVLGNDHN 1310
Query: 405 EFRSRENP 412
EFR RENP
Sbjct: 1311 EFRGRENP 1318
>gi|356570929|ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
Length = 1258
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/416 (76%), Positives = 356/416 (85%), Gaps = 4/416 (0%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
M H KRLNV+KFHL GTP+KVLYH ES++L+VMRTELN C SDICCVD LSGSVLSSF
Sbjct: 781 MGHGKRLNVQKFHLEGTPRKVLYHDESKMLLVMRTELNCGPCLSDICCVDSLSGSVLSSF 840
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+LELGETGKSMELVRVG EQVLVVGTSLSSGP MP+GEAES KGRL+VLC++H+QNSD
Sbjct: 841 RLELGETGKSMELVRVGSEQVLVVGTSLSSGPHTMPTGEAESCKGRLLVLCLDHVQNSDS 900
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQ+TSPF EIV YA E LSSSSL SSPDD S DGIKL E E WQ RLA
Sbjct: 901 GSMTFCSKAGSSSQKTSPFHEIVTYAPELLSSSSLGSSPDDNSSDGIKLHENEVWQFRLA 960
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+T WPG+VL ICPYLDRYFLA+AGNAFYVCGFPNDNPQRVRR+A+GRTR+MI LTAH
Sbjct: 961 YATKWPGVVLKICPYLDRYFLATAGNAFYVCGFPNDNPQRVRRYAMGRTRYMITSLTAHL 1020
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDGIL YSYHE+A+KLE +Y DPSQR+VADC+LMD DTAVVSDRKGSIAVL
Sbjct: 1021 TRIAVGDCRDGILLYSYHEEAKKLELLYNDPSQRIVADCILMDADTAVVSDRKGSIAVL- 1079
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDAL---GDCLASFESSQT 357
CSD LEDNA +CN+T +CAY M EIA+SI+KGS+ Y+LPADD L + +S Q
Sbjct: 1080 CSDHLEDNAGAQCNMTLSCAYFMAEIAMSIKKGSYSYRLPADDVLEGGNGPKTNVDSLQN 1139
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
TIIASTLLGSI+IFIP+S EEYELLE VQARL +H LTAP+LGNDH EFRSREN V
Sbjct: 1140 TIIASTLLGSIMIFIPLSREEYELLEVVQARLVVHHLTAPVLGNDHHEFRSRENRV 1195
>gi|356505471|ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
Length = 1278
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/416 (76%), Positives = 360/416 (86%), Gaps = 4/416 (0%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLN++KFHL GTP+KVLYH ES++L+VMRTELN TC SDIC +DPLSGSVLSSF
Sbjct: 787 MVHSKRLNMQKFHLEGTPRKVLYHDESKMLLVMRTELNCGTCLSDICIMDPLSGSVLSSF 846
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+LELGETGKSMELVRVG EQVLVVGTSLSSGP M +GEAES KGRL+VLC++H+QNSD
Sbjct: 847 RLELGETGKSMELVRVGSEQVLVVGTSLSSGPHTMATGEAESCKGRLLVLCLDHVQNSDS 906
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GS+TFCSKAGSSSQ+TSPFREIV YA EQLSSSSL SSPDD S DGIKL+E E WQ RL
Sbjct: 907 GSVTFCSKAGSSSQKTSPFREIVTYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLT 966
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
++T WPG+VL ICPYLDRYFLA+AGNAFYVCGFPNDNPQRVRR+A+GR RFMI LTAHF
Sbjct: 967 FATKWPGVVLKICPYLDRYFLATAGNAFYVCGFPNDNPQRVRRYAMGRARFMITSLTAHF 1026
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDGIL YSYHE+A+KLE +Y DPS RLVADC+LMD DTAVVSDRKGSIAVL
Sbjct: 1027 TRIAVGDCRDGILLYSYHEEAKKLELLYNDPSLRLVADCILMDADTAVVSDRKGSIAVL- 1085
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDAL---GDCLASFESSQT 357
CSD LEDNA +CN+ +CAY M EIA+SI+KGS+ Y+LPADD L + +S Q
Sbjct: 1086 CSDHLEDNAGAQCNMALSCAYFMAEIAMSIKKGSYSYRLPADDVLQGGNGPKTNVDSLQN 1145
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
TIIA+TLLGSI+IFIP+S EEYELLEAVQARL +H LTAP+LGNDH+EFRSREN V
Sbjct: 1146 TIIATTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNEFRSRENRV 1201
>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
Length = 1331
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 316/420 (75%), Positives = 359/420 (85%), Gaps = 9/420 (2%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KF LGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 847 MVHSKRRNAQKFQLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 905
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGR+I+LC+EH QNSD
Sbjct: 906 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRVIILCLEHTQNSDS 965
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKA SSSQRTSPF ++VGY TE LSSSSLCSSPDD S DGIKL+E ETWQLRLA
Sbjct: 966 GSMTICSKACSSSQRTSPFHDVVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLA 1025
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
STTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1026 SSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1085
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1086 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1145
Query: 301 CSDRLE------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD--CLASF 352
C D + + +SPE NL NCAY+MGEIA+SI+KG IYKLPADD L S
Sbjct: 1146 CKDHSDFGMKHLEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSI 1205
Query: 353 ESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+++ TIIA TLLGSI +F PISSEEYELLE VQA+L IHPLTAP+LGNDH+EFR RENP
Sbjct: 1206 DTADDTIIAGTLLGSIFVFAPISSEEYELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENP 1265
>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1379
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 316/420 (75%), Positives = 359/420 (85%), Gaps = 9/420 (2%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KF LGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 895 MVHSKRRNAQKFQLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 953
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGR+I+LC+EH QNSD
Sbjct: 954 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRVIILCLEHTQNSDS 1013
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKA SSSQRTSPF ++VGY TE LSSSSLCSSPDD S DGIKL+E ETWQLRLA
Sbjct: 1014 GSMTICSKACSSSQRTSPFHDVVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLA 1073
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
STTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1074 SSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1133
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1134 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1193
Query: 301 CSDRLE------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD--CLASF 352
C D + + +SPE NL NCAY+MGEIA+SI+KG IYKLPADD L S
Sbjct: 1194 CKDHSDFGMKHLEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSI 1253
Query: 353 ESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+++ TIIA TLLGSI +F PISSEEYELLE VQA+L IHPLTAP+LGNDH+EFR RENP
Sbjct: 1254 DTADDTIIAGTLLGSIFVFAPISSEEYELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENP 1313
>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1329
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 318/428 (74%), Positives = 360/428 (84%), Gaps = 17/428 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KF LGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 837 MVHSKRRNAQKFQLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 895
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGR+I+LC+EH QNSD
Sbjct: 896 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRVIILCLEHTQNSDS 955
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKA SSSQRTSPF ++VGY TE LSSSSLCSSPDD S DGIKL+E ETWQLRLA
Sbjct: 956 GSMTICSKACSSSQRTSPFHDVVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLA 1015
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
STTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1016 SSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1075
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1076 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1135
Query: 301 CSDRLE-----------DN---ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
C D + DN +SPE NL NCAY+MGEIA+SI+KG IYKLPADD L
Sbjct: 1136 CKDHSDFGMKHLVKIPHDNPEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLR 1195
Query: 347 D--CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
S +++ TIIA TLLGSI +F PISSEEYELLE VQA+L IHPLTAP+LGNDH+
Sbjct: 1196 SYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEEYELLEGVQAKLGIHPLTAPVLGNDHN 1255
Query: 405 EFRSRENP 412
EFR RENP
Sbjct: 1256 EFRGRENP 1263
>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
Length = 1298
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 293/332 (88%), Positives = 318/332 (95%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KF+LGGTP+KVLYHSESRLL+VMRTEL+ DT SSDICCVDPLSGSVLSSF
Sbjct: 955 MVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSF 1014
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLELGETGKSMELVRV +EQVLV+GTSLSSGPA+MPSGEAESTKGRLIVLC+EHMQNSD
Sbjct: 1015 KLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLEHMQNSDS 1074
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPFREIVGYA EQLS SSLCSSPDD SCDG++LEE+E WQLRLA
Sbjct: 1075 GSMTFCSKAGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLA 1134
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+ TWPGMVLAICPYLDRYFLASAGN+FY CGFPNDNPQRVRRFAVGRTRFMIM LTAHF
Sbjct: 1135 YTATWPGMVLAICPYLDRYFLASAGNSFYACGFPNDNPQRVRRFAVGRTRFMIMSLTAHF 1194
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDG++FYSYHED+RKLEQ+YCDP QRLVADC+LMDVDTAVVSDRKGSIAVLS
Sbjct: 1195 TRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLS 1254
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRK 332
CS+ LEDNASPECNLT NC+Y+MGEIA+SI+K
Sbjct: 1255 CSNHLEDNASPECNLTLNCSYYMGEIAMSIKK 1286
>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
Length = 1370
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 358/420 (85%), Gaps = 8/420 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MV++KRLN+RKFHL GTP+KVLYH+ES++L+VMRTEL+ TC SDICCVDPLSGSVLSSF
Sbjct: 890 MVYSKRLNMRKFHLKGTPRKVLYHNESQMLLVMRTELSIGTCLSDICCVDPLSGSVLSSF 949
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+LELGET SMEL+RVG EQVLVVGTSL SGP +PSGEAES KGRL+VLCI+H+QNSD
Sbjct: 950 RLELGETATSMELIRVGSEQVLVVGTSLYSGPPAIPSGEAESAKGRLLVLCIDHVQNSDS 1009
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSS--PDDASCDGIKLEETETWQLR 178
GSMTFCSKAGSSSQRTSPF EIVG+ EQL SS + PDD S DGIKL+E E WQ R
Sbjct: 1010 GSMTFCSKAGSSSQRTSPFNEIVGHVPEQLCLSSSSLASSPDDNSFDGIKLDENEIWQFR 1069
Query: 179 LAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA 238
LA +TTW G+V AICPYLDRYFLASA NAFYVCGFPND PQRVR++AVGRTR+ I LTA
Sbjct: 1070 LASATTWQGIVQAICPYLDRYFLASAANAFYVCGFPNDTPQRVRKYAVGRTRYSIRSLTA 1129
Query: 239 HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV 298
+F+RIAVGD RDGILF+SYHE+ARKLEQ+Y DPSQRLVADC+LMD +TA+VSDRKGSIAV
Sbjct: 1130 YFSRIAVGDNRDGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTAIVSDRKGSIAV 1189
Query: 299 LSCSDRLE--DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA---SFE 353
L CSD LE +NAS ECNL +CAY M EIAVSIRKGS+ Y+LPADD L + + +
Sbjct: 1190 L-CSDHLEAPNNASTECNLRLSCAYFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVD 1248
Query: 354 SSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
S Q TI+ STLLGSI+IFIP+S EEYELLEAVQARLA+H LTAP+LGNDH+EFRSRENPV
Sbjct: 1249 SLQNTILVSTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENPV 1308
>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
Length = 1355
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/413 (54%), Positives = 302/413 (73%), Gaps = 6/413 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
+VH KRLN +KF +GGTP+KVLYH+ESR L+V+RT LN + SSD+ VDP +G +LS +
Sbjct: 891 LVHGKRLNAQKFSIGGTPRKVLYHNESRTLLVLRTGLNGASSSSDVVQVDPQNGVLLSRY 950
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNS-D 119
K E GET K M++ ++G++QVL+VGT+ S+G +M +GEAES KGRLIVL +E +++ +
Sbjct: 951 KCEPGETAKCMQIAKIGNDQVLIVGTTKSAGRPMMSNGEAESIKGRLIVLSLEAVESPRE 1010
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
S SS SPF EIVGY TE+ SS+S+CSSPD+ SC+ I+ E+ T QLR
Sbjct: 1011 SSSFIPTFSFNPSSHSGSPFHEIVGYTTEEFSSNSMCSSPDEFSCNQIQAEQM-TGQLRS 1069
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
G VLA+CPYLDRY LA+AGN YV GF N+NP R+++ AVGRTRF I L
Sbjct: 1070 LTQYILNGAVLALCPYLDRYVLAAAGNMIYVFGFTNENPHRIKKCAVGRTRFTITCLKTF 1129
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSY+E RKLE +Y DP+ RLV D L++ +TAVVSDR+GSI+VL
Sbjct: 1130 ASRIAVGDCRDGVLFYSYNESHRKLELVYSDPAHRLVGDIALLNCETAVVSDRRGSISVL 1189
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC+ RLE + SP+ NL NC+++MGE A+SI+K +F Y+LP DD D E+ I
Sbjct: 1190 SCT-RLEVSESPQKNLAVNCSFYMGETAMSIQKAAFRYRLPIDD---DTDPVLETVYNCI 1245
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+AST+LGS+ + IP+SSEE++LL+ VQ +L++HPLTAP+LGNDH+EFR R P
Sbjct: 1246 VASTMLGSLFVMIPLSSEEHQLLQDVQEKLSVHPLTAPVLGNDHAEFRQRGTP 1298
>gi|115471083|ref|NP_001059140.1| Os07g0203700 [Oryza sativa Japonica Group]
gi|113610676|dbj|BAF21054.1| Os07g0203700, partial [Oryza sativa Japonica Group]
Length = 666
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/413 (55%), Positives = 304/413 (73%), Gaps = 7/413 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+V+RT L + +CSSDI +DP +G++LS F
Sbjct: 203 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQIDPSNGALLSRF 262
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNS-D 119
K E GET K M++ ++G++QVL+VGTS S+G +MP+GEAES KGRLI+L +E +++ +
Sbjct: 263 KCEPGETAKCMQIAKIGNDQVLIVGTSKSNGRPMMPNGEAESIKGRLILLSLETIESPRE 322
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
GS T S +SS SPF E VGYA E+LSS+S+CSSPD+ C+ I+ E LR
Sbjct: 323 SGSFTAASNL-NSSHAGSPFPEFVGYAAEELSSNSMCSSPDEVCCNQIQ-PELMAGHLRS 380
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN +V GF N++P R++++ RTRF I L +
Sbjct: 381 LVQHTFNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTY 440
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L+ +TAVVSDR+GSI+VL
Sbjct: 441 ASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVL 500
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC RLE + SPE NL +C+++MGE A+SI+K +F + LP DD L ES +
Sbjct: 501 SCP-RLEVSESPEKNLAVHCSFYMGETAMSIQKVAFKHWLPIDDLTEPVL---ESVYNCV 556
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+ASTLLGSI + IP++SEE+++L+ VQ RL++HPLTAPLLGNDH+EFR R P
Sbjct: 557 VASTLLGSIFVMIPLTSEEHQMLQDVQERLSVHPLTAPLLGNDHAEFRRRGIP 609
>gi|33146591|dbj|BAC79787.1| putative Splicing factor 3B subunit 3 [Oryza sativa Japonica Group]
gi|222636635|gb|EEE66767.1| hypothetical protein OsJ_23488 [Oryza sativa Japonica Group]
gi|429459546|gb|AFZ84679.1| spotted leaf 5 [Oryza sativa Japonica Group]
Length = 1355
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/413 (55%), Positives = 304/413 (73%), Gaps = 7/413 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+V+RT L + +CSSDI +DP +G++LS F
Sbjct: 892 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQIDPSNGALLSRF 951
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNS-D 119
K E GET K M++ ++G++QVL+VGTS S+G +MP+GEAES KGRLI+L +E +++ +
Sbjct: 952 KCEPGETAKCMQIAKIGNDQVLIVGTSKSNGRPMMPNGEAESIKGRLILLSLETIESPRE 1011
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
GS T S +SS SPF E VGYA E+LSS+S+CSSPD+ C+ I+ E LR
Sbjct: 1012 SGSFTAASNL-NSSHAGSPFPEFVGYAAEELSSNSMCSSPDEVCCNQIQ-PELMAGHLRS 1069
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN +V GF N++P R++++ RTRF I L +
Sbjct: 1070 LVQHTFNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTY 1129
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L+ +TAVVSDR+GSI+VL
Sbjct: 1130 ASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVL 1189
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC RLE + SPE NL +C+++MGE A+SI+K +F + LP DD L ES +
Sbjct: 1190 SCP-RLEVSESPEKNLAVHCSFYMGETAMSIQKVAFKHWLPIDDLTEPVL---ESVYNCV 1245
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+ASTLLGSI + IP++SEE+++L+ VQ RL++HPLTAPLLGNDH+EFR R P
Sbjct: 1246 VASTLLGSIFVMIPLTSEEHQMLQDVQERLSVHPLTAPLLGNDHAEFRRRGIP 1298
>gi|224088148|ref|XP_002308344.1| predicted protein [Populus trichocarpa]
gi|222854320|gb|EEE91867.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/260 (84%), Positives = 243/260 (93%), Gaps = 3/260 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTEL--NNDTCSSDICCVDPLSGSVLS 58
MVH+ RLNV+KFHLGGTP+KV YHSES+LL+VMRTEL +NDTCSSDICCVDPLSGS +S
Sbjct: 7 MVHSTRLNVQKFHLGGTPRKVQYHSESKLLLVMRTELSNDNDTCSSDICCVDPLSGSTVS 66
Query: 59 SFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNS 118
SFKLE GETGKSMELV++G+EQVLV+GTSLSSGPAIMPSGEAESTKGR+IVLC+E++QNS
Sbjct: 67 SFKLERGETGKSMELVKIGNEQVLVIGTSLSSGPAIMPSGEAESTKGRVIVLCLENLQNS 126
Query: 119 DCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLR 178
D GSMTFCSKAGSSSQRTSPFREIVGYA EQLSSSSLCSSPDD SCDG+KLEETETWQLR
Sbjct: 127 DSGSMTFCSKAGSSSQRTSPFREIVGYAAEQLSSSSLCSSPDDTSCDGVKLEETETWQLR 186
Query: 179 LAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA 238
+TT PGMVLAICPYLDR+FLASAGN+FYVCGF NDN +RV++FAVGRTRFMIM LTA
Sbjct: 187 FVSATTLPGMVLAICPYLDRFFLASAGNSFYVCGFANDN-KRVKKFAVGRTRFMIMSLTA 245
Query: 239 HFTRIAVGDCRDGILFYSYH 258
+ TRIAVGDCRDGILFY+YH
Sbjct: 246 YHTRIAVGDCRDGILFYAYH 265
>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
distachyon]
Length = 1356
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/413 (54%), Positives = 299/413 (72%), Gaps = 5/413 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +K + GTP+KVLYHS+SR L+VMRT L +CSSDI +DP +G++LS F
Sbjct: 893 MVHGKRLNAQKLSIEGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGTLLSRF 952
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
K E GET K +++ ++G+EQVL+VGTS S+ +MP+GEAES KGRLIVL ++ + +
Sbjct: 953 KCEPGETAKCIQIAKIGNEQVLLVGTSKSTDRPMMPNGEAESIKGRLIVLSLDTLGSPRE 1012
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
S + SSS T F EIVGYATE+ SS+S+CSSPDD + I+ E+ +R
Sbjct: 1013 SSSFVPTSNLSSSSHTGSFPEIVGYATEEFSSNSMCSSPDDVCYNQIQHEQM-AGHMRSL 1071
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
T+ G VLA+ PYLDRY +A+AGNA V GF N+NP R++++A+ RTRF I L +
Sbjct: 1072 THVTFAGAVLAVYPYLDRYVVAAAGNALCVFGFVNENPHRMKKYAISRTRFTITCLKTYA 1131
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
+RIA GDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L++ +TAVVSDR+GSI+VLS
Sbjct: 1132 SRIAAGDCRDGVLFYSYHENLRKLELIYADPAQRLVGDVALLNCETAVVSDRRGSISVLS 1191
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
C RLE + SPE NL C++ MGEIA+SI+K +F Y+LP DD L ES+ ++
Sbjct: 1192 CP-RLEVSESPEKNLAVRCSFFMGEIAMSIQKAAFKYRLPIDDETDPVL---ESAYNCVV 1247
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
ASTLLGS+ + IP++SEE+ LL+ VQ RL++HPLTAP+LGNDH+EFR R P+
Sbjct: 1248 ASTLLGSVFVMIPLTSEEHHLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPL 1300
>gi|326510951|dbj|BAJ91823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/413 (55%), Positives = 295/413 (71%), Gaps = 7/413 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+VMRT L +CSSDI +DP +G +LS F
Sbjct: 897 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGILLSRF 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K ELGET K +++ ++G EQVL+VGTS S +MP+GEAE KGRLIVL ++ + + +
Sbjct: 957 KCELGETAKCIQIAKIGSEQVLIVGTSKSIDRPMMPNGEAEGIKGRLIVLSLDTLGSPHE 1016
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
C S S SSS T F EIVGYA E+ SS+S+CSSPDD + I+ E+ LR
Sbjct: 1017 CSSFIPTSNLSSSSH-TGSFPEIVGYANEEFSSNSMCSSPDDICYNQIQFEQIAG-NLRS 1074
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN V GF N+NP R++++AV RTRF I L +
Sbjct: 1075 LTHVTFTGAVLAVYPYLDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTY 1134
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
++IA GDCRDG+LFYSYHE+ RKLE +Y DP+QRLV D VL+D +TAVVSDR GSI+VL
Sbjct: 1135 ASQIAAGDCRDGVLFYSYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRCGSISVL 1194
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC LE + SPE NL C++ MGEIA+SI+K +F Y+L D L ES+ +
Sbjct: 1195 SCPG-LEVSESPEKNLAVQCSFFMGEIAMSIQKAAFKYRLSIGDETDPVL---ESAYNCV 1250
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+ASTLLGS+ + IP++SEE++LL+ VQ RL++HPLTAP+LGNDH+EFR R P
Sbjct: 1251 VASTLLGSVFVMIPLTSEEHQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIP 1303
>gi|326519701|dbj|BAK00223.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/413 (54%), Positives = 294/413 (71%), Gaps = 7/413 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+VMRT L +CSSDI +DP +G +LS F
Sbjct: 897 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGILLSRF 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K ELGET K +++ ++G EQVL+VGTS S +MP+GEAE KGRLIVL ++ + + +
Sbjct: 957 KCELGETAKCIQIAKIGSEQVLIVGTSKSIDRPMMPNGEAEGIKGRLIVLSLDTLGSPHE 1016
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
C S S SSS T F EIVG A E+ SS+S+CSSPDD + I+ E+ LR
Sbjct: 1017 CSSFIPTSNLSSSSH-TGSFPEIVGCANEEFSSNSMCSSPDDICYNQIQFEQIAG-NLRS 1074
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN V GF N+NP R++++AV RTRF I L +
Sbjct: 1075 LTHVTFTGAVLAVYPYLDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTY 1134
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
++IA GDCRDG+LFYSYHE+ RKLE +Y DP+QRLV D VL+D +TAVVSDR GSI+VL
Sbjct: 1135 ASQIAAGDCRDGVLFYSYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRCGSISVL 1194
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC LE + SPE NL C++ MGEIA+SI+K +F Y+L D L ES+ +
Sbjct: 1195 SCPG-LEVSESPEKNLAVQCSFFMGEIAMSIQKAAFKYRLSIGDETDPVL---ESAYNCV 1250
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+ASTLLGS+ + IP++SEE++LL+ VQ RL++HPLTAP+LGNDH+EFR R P
Sbjct: 1251 VASTLLGSVFVMIPLTSEEHQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIP 1303
>gi|218199276|gb|EEC81703.1| hypothetical protein OsI_25307 [Oryza sativa Indica Group]
Length = 1429
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/486 (45%), Positives = 297/486 (61%), Gaps = 79/486 (16%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+V+RT L + +CSSDI +DP +G++LS F
Sbjct: 892 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQIDPSNGALLSRF 951
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K E GET K M++ ++G++QVL+VGTS S+G +MP+GEAES KGRLI+L +E +++ +
Sbjct: 952 KCEPGETAKCMQIAKIGNDQVLIVGTSKSNGRPMMPNGEAESIKGRLILLSLETIESPRE 1011
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
GS T S +SS SPF E VGYA E+LSS+S+CSSPD+ C+ I+ E LR
Sbjct: 1012 SGSFTAASNL-NSSHAGSPFPEFVGYAAEELSSNSMCSSPDEVCCNQIQ-PELMAGHLRS 1069
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN +V GF N++P R++++ RTRF I L +
Sbjct: 1070 LVQHTFNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTY 1129
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L+ +TAVVSDR+GSI+VL
Sbjct: 1130 ASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVL 1189
Query: 300 S-----------------CSDRLEDNA----------SPECNLTP-NCAYHMGEIAVSIR 331
S CS + + A + C L P C GE + ++R
Sbjct: 1190 SCPRLEVSESPEKNLAVHCSGYMGETAMSIQKRWRLRNNTCWLLPLGCWLLRGEASSAVR 1249
Query: 332 KG---------------------------------------------SFIYKLPADDALG 346
K +F + LP DD
Sbjct: 1250 KSRQWGRRLVGVAMAASSVVVAAAKRRDGGAKRRDGAARWWRYETAVAFKHWLPIDDLTE 1309
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
L ES ++ASTLLGSI + IP++SEE+++L+ VQ RL++HPLTAPLLGNDH+EF
Sbjct: 1310 PVL---ESVYNCVVASTLLGSIFVMIPLTSEEHQMLQDVQERLSVHPLTAPLLGNDHAEF 1366
Query: 407 RSRENP 412
R R P
Sbjct: 1367 RRRGIP 1372
>gi|168031491|ref|XP_001768254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680432|gb|EDQ66868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1391
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 193/424 (45%), Positives = 265/424 (62%), Gaps = 24/424 (5%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDT-CSSDICCVDPLSGSVLSS 59
M H KRLNV+K LG TP++VLYH+ES+ LIVMRT+ D SD+CCVDPLSG+ S
Sbjct: 913 MEHLKRLNVQKLPLGRTPRRVLYHTESKTLIVMRTDYGPDGGLVSDVCCVDPLSGANYSC 972
Query: 60 FKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSD 119
+ L+ GE +S++L + EQ+L+VGTSL G IM SGEAES KGRL+V +
Sbjct: 973 YTLDAGEVARSIQLWKRRQEQLLLVGTSLIGGGGIMSSGEAESAKGRLLVFQL------- 1025
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
G+ SQ + + SS + D L + E W+LRL
Sbjct: 1026 -----LSKHVGTHSQPVMSSTNTPTLSNQSTPGSSAADPMVLSESDESDLTDGEGWELRL 1080
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
PG VL++ YL +Y LASAGN + GF D+PQR+RR A+ +TRFMI L+ H
Sbjct: 1081 KTHIILPGAVLSVSSYLGQYVLASAGNCLFCLGFRPDSPQRLRRMAMVKTRFMITSLSVH 1140
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDGILFY+Y E + +LE +YC Q+LVADCVLMD DTAVV+DR+G+
Sbjct: 1141 LSRIAVGDCRDGILFYTYQEVSGQLELLYCGGIQQLVADCVLMDTDTAVVTDRRGNFCTF 1200
Query: 300 SCSDRLE--------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCL-- 349
S + E ++ SPE NL+ C YH+GE + I K SF Y+ PA++++ +C
Sbjct: 1201 SSASTPEGDLNFFFAESVSPERNLSLGCWYHIGETLMRIHKASFAYESPAEESMKNCGSN 1260
Query: 350 -ASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
A + ++++AS+LLGS+ IFI ++ EEY+LL+AVQ+RLA +P+T PLLGN+H ++R
Sbjct: 1261 DAIAHPTHSSVVASSLLGSVFIFIKVTREEYDLLKAVQSRLAHYPITTPLLGNNHEDYRG 1320
Query: 409 RENP 412
+ P
Sbjct: 1321 QGCP 1324
>gi|302820387|ref|XP_002991861.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
gi|300140399|gb|EFJ07123.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
Length = 1292
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 250/428 (58%), Gaps = 51/428 (11%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
M ++ LNV+K HLG T ++VLYH ES +LIV+R + SD+CC++PLSG+VL
Sbjct: 837 MEQSRTLNVQKLHLGCTGRRVLYHPESGVLIVLRLLSEH---RSDVCCIEPLSGAVLCVH 893
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAE---------STKGRLIVLC 111
+ + K MEL+++G EQ+L+VGT+ S A+M +GEAE S++G L+VL
Sbjct: 894 PFGVEQIVKCMELMKLGDEQLLLVGTASDSRRAVMTTGEAERQAFYFLFSSSRGVLVVLY 953
Query: 112 IEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEE 171
++ S + SS + +S+ PDD
Sbjct: 954 LDAPPPPSPRSPMSSPTSESSGR------------------ASIVFQPDD---------- 985
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFP--NDNPQRVRRFAVGRT 229
+ + PG V A+ YL +Y LA AGN + G +++P+R ++ A +T
Sbjct: 986 ---YCFVPRANVGLPGPVNAVASYLGQYVLACAGNHLFCLGIASMDESPRRWKKLASIKT 1042
Query: 230 RFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVV 289
RF+I ++ FT IAVGDCRDG+L ++Y ED++KLE I CDP +RLV+DC L+DVDTAVV
Sbjct: 1043 RFVITSISVRFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVV 1102
Query: 290 SDRKGSIAVLSCSDRLE-----DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
DR+G+ LS ++ E ++ SPE NL +C +H+GE+ ++RKGSF +K D
Sbjct: 1103 VDRQGNFCALSANEETEGKCDSNSGSPEKNLEAHCWFHIGEVCTTVRKGSFAFKAVEDSC 1162
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
D L ++ +IA+TLLGS+ IF+ ++ EEY LL+A+Q RL++ P TAP+LGNDH+
Sbjct: 1163 SVDRLIP-NMGKSCVIATTLLGSVFIFVRMTGEEYSLLQALQRRLSVLPATAPVLGNDHA 1221
Query: 405 EFRSRENP 412
FR + P
Sbjct: 1222 RFRGQGRP 1229
>gi|302822731|ref|XP_002993022.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
gi|300139222|gb|EFJ05968.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
Length = 1277
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/414 (40%), Positives = 241/414 (58%), Gaps = 27/414 (6%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
M ++ LNV+K LG T ++VLYH ES +LIV+R + SD+CC++PLSG+VL
Sbjct: 826 MEQSRTLNVQKLRLGCTGRRVLYHPESGVLIVLRLLSEH---RSDVCCIEPLSGAVLCVH 882
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+G+ K MEL+++G EQ+L+VGT+ + A+M +GEAE V + +S
Sbjct: 883 PFGVGQIVKCMELMKLGDEQLLLVGTASDTRRAVMATGEAERQAFYFCVSNTGYFPSSSR 942
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
G + + SP + A+E +S+ PDD +
Sbjct: 943 GVLVVLYL--DAPPPPSPHSPMSSPASESSGGASIVFQPDD-------------YCFVPR 987
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFP--NDNPQRVRRFAVGRTRFMIMLLTA 238
+ PG V A+ YL +Y LA AGN + G +++P+R ++ A +TRF+I ++
Sbjct: 988 ANVGLPGPVNAVASYLGQYVLACAGNHLFCLGIASMDESPRRWKKLASIKTRFVITSISV 1047
Query: 239 HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV 298
FT IAVGDCRDG+L ++Y ED++KLE I CDP +RLV+DC L+DVDTAVV DR G+
Sbjct: 1048 RFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVDRHGNFCA 1107
Query: 299 LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT 358
LS ++ E N SPE NL +C +H+GE+ ++RK L D S E S +
Sbjct: 1108 LSTNEETEGNGSPEKNLEAHCWFHIGEVCTTVRKVRTSRFLCKD-------TSRECSVSC 1160
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+IA+TLLGS+ IF+ I+ EEY LL+A+Q RL+ P TAP+LGNDH+ FR + P
Sbjct: 1161 VIATTLLGSVFIFVRITGEEYSLLQALQRRLSFLPATAPVLGNDHARFRGQGRP 1214
>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
sativus]
Length = 997
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/101 (86%), Positives = 95/101 (94%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLNV+KFHLGGTP+KVLYHSES+LL+VMRT+L NDT SSDICCVDPLSGS+LSS
Sbjct: 897 MVHTKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQLINDTSSSDICCVDPLSGSILSSH 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAE 101
KLE+GETGKSMELVR G+EQVLVVGTSLSSGPAIM SGEAE
Sbjct: 957 KLEIGETGKSMELVRNGNEQVLVVGTSLSSGPAIMASGEAE 997
>gi|147855335|emb|CAN83881.1| hypothetical protein VITISV_003998 [Vitis vinifera]
Length = 150
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 104/137 (75%), Gaps = 3/137 (2%)
Query: 282 MDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
MDVDT VVSB KGSI VLSCS+ LEDNASP+ NLT C+Y+ G+ ++SI+KGSF Y+LP
Sbjct: 1 MDVDTXVVSBCKGSIVVLSCSNHLEDNASPKXNLTLXCSYYXGKTSMSIKKGSFSYELPT 60
Query: 342 DDALGDCLAS---FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPL 398
DD L C S + S+ +I+ TLL SI++FIPIS EE+ELLE VQARL +H LT +
Sbjct: 61 DDVLKGCAGSKTIIDXSENSIMVGTLLRSIIMFIPISREEHELLEVVQARLVVHQLTTSI 120
Query: 399 LGNDHSEFRSRENPVRK 415
LGNDH+EF+S EN VRK
Sbjct: 121 LGNDHNEFQSCENSVRK 137
>gi|449516353|ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 158
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Query: 360 IASTLLGSIVIFI---PISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
+ S L GSI + I +EYELLEAVQA+LA+HPLT+P+LGNDH E+RSRENP+
Sbjct: 38 LPSILCGSISLIIFSFWFFRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENPI 94
>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
Length = 1169
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 52/258 (20%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMI 233
+++RL + T G+V A Y R LAS G +R+R +A+G+ + ++
Sbjct: 904 NFEIRLLHVTRVGGVVRAFTGYEGR-LLASVG-------------KRIRLYALGKKQLLL 949
Query: 234 ------------MLLTAHFTRIAVGDCRDGILFYS---YHEDARKLEQIYCDPSQRLVAD 278
+ L A +RI GD R+GI Y E+A + E + R +
Sbjct: 950 KAEHRTCSDHGFIWLNAVGSRIFAGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTS 1009
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
C +D T + D+ SI V ++ ++ L C +H+G++ ++ K
Sbjct: 1010 CAQLDYSTVIAGDKFDSIFVTRVP---QEESTRHIQLENVCQFHLGDLPTAMDK------ 1060
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAP 397
A+ S ++ T++GSI +P S +E + L+ ++ +A P
Sbjct: 1061 -----------AALSQSTHVVLYGTVMGSIGALVPFQSKDELDFLQHLEMLMATE--APP 1107
Query: 398 LLGNDHSEFRSRENPVRK 415
L G +HS +RS PV++
Sbjct: 1108 LCGREHSFYRSYYVPVQQ 1125
>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
Length = 1233
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 169/423 (39%), Gaps = 31/423 (7%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE 66
N LG TP++ + H ++ +I + TE N +T DI ++ + K E+ E
Sbjct: 781 FNQETIKLGATPRRFIVHPQTNYIITLETETNYNTEQIDIEKINAERQAEYEKKKQEIQE 840
Query: 67 TGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIE---------HMQN 117
+ ++ G P + +A + R I+ I+ + +
Sbjct: 841 NMDMDMDMDDNNDDANTDGQI--KKPKFIYKPKAGRGQWRSIIKIIDPISHQVYESYQLD 898
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
+ + C+ + S F +VG + + C S AS + K E E +L
Sbjct: 899 ENEAGFSLCTLSFSDRGDGEIFL-VVGCGNNVILNPKSCES---ASINLYKFTE-EGKKL 953
Query: 178 RLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT 237
+L Y T V A+ P+ R A G + + + +R+ I+ +
Sbjct: 954 QLVYKTEAEEPVYAMAPFQGR-LCAGVGKNIRI--YDMGKKKLLRKCETKNLPNTIVNIH 1010
Query: 238 AHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIA 297
+ R+ VGD ++ I F Y + L D + R + V++D DT +D+ G+I
Sbjct: 1011 SLGDRLVVGDIQESIHFIKYKKLENMLYVFADDLAPRWITSSVMLDYDTVAGADKFGNIF 1070
Query: 298 VLSCSDRLEDNASPECNLTP---NCAYHMGEIAVSIRKGSFIYKLPADDALG--DCLASF 352
+L RL N S E P + G + + K I + A DA+ + +
Sbjct: 1071 IL----RLPSNVSDEVEEDPTGSKLKFESGLLNGAPHKLEHIANIFAGDAITTLNKTSLV 1126
Query: 353 ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
++ +T+ G+I IP +S E+ + +++ L + APL G DH +RS
Sbjct: 1127 VGGSDVLLYTTISGAIGALIPFVSREDVDFFSSLE--LQLRNEHAPLCGRDHLAYRSYYF 1184
Query: 412 PVR 414
PV+
Sbjct: 1185 PVK 1187
>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
Length = 1208
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 40/205 (19%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ +++ +R+ VGD ++ + F Y +L D S R V +D DT V
Sbjct: 979 YRIVTISSMGSRVIVGDVQESVHFVKYRAKENRLVVFADDVSPRYVTATCFLDYDTIAVG 1038
Query: 291 DRKGSIAVLSCSDRLED-------------------NASPECNLTPNCAYHMGEIAVSIR 331
D+ GSIA+L SD + D AS + NL ++++GE +S++
Sbjct: 1039 DKFGSIAILRLSDDINDEIEEDPTGAKAFWDRGLLNGASQKANL--EASFYIGETVMSLQ 1096
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
K + I ++I +TL GSI + +P +S EE + + ++ L
Sbjct: 1097 KTTII----------------PGGSESLIYTTLSGSIGVLLPFTSREEVDFFQHLEMHLR 1140
Query: 391 IHPLTAPLLGNDHSEFRSRENPVRK 415
AP+ G DH +RS P +
Sbjct: 1141 SE--NAPICGRDHLAYRSYYFPAKN 1163
>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
Length = 1217
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 112/275 (40%), Gaps = 65/275 (23%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
TE L L + TT + LAICPY R + + +R + +G+ +
Sbjct: 932 TECTSLELVHKTTLDEVPLAICPYQGRVLVGVG--------------RMLRLYDMGKKKL 977
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ I+ + A RI V D ++ + Y +L D R +
Sbjct: 978 LRKCENKHIPNAIVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTC 1037
Query: 281 LMDVDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNCAYH 322
++D DT +D+ G+IAV+ + + D N + + T C +H
Sbjct: 1038 VLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FH 1096
Query: 323 MGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYEL 381
+GE +S++K + I +++ +TL G++ + +P +S E+++
Sbjct: 1097 VGETVMSLQKATLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDF 1140
Query: 382 LEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
+ ++ + + HP PL G DH FRS PV+
Sbjct: 1141 FQHLEMHMRSEHP---PLCGRDHLSFRSYYYPVKN 1172
>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
Length = 1216
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 173/456 (37%), Gaps = 104/456 (22%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSD-------ICCVDPLSGSVLSS 59
N F TP+K + H+ES ++++ TE N T + + +GS ++
Sbjct: 773 FNQVSFPFEYTPRKFVIHNESAHVLLIETEHNAYTEETKQQRRLQMAEEMQEAAGSDEAA 832
Query: 60 FKLELGETGKSMELVRVGHEQVL---VVGTSLSS------GPAIMPSGEAESTKGRLIVL 110
EL E S E +EQV G L + P + + + L L
Sbjct: 833 VARELAEAFLSEE----PNEQVFGAPRAGPGLWASLIRVMAPTTGTTFQVHRLEQNLAAL 888
Query: 111 CIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLE 170
C+ ++ ++ G F + + +P R G SS C+S
Sbjct: 889 CLALVKFANQGDQQFLIVGVAKEYQLNP-RISNGGFLYTYKVSSDCTS------------ 935
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+ L + TT + LAICPY R + + +R + +G+ +
Sbjct: 936 ------IELMHRTTLDEIPLAICPYQGRVLVGVG--------------KMLRLYDMGKKK 975
Query: 231 FM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADC 279
+ ++ + A RI V D ++ + Y +L D R +
Sbjct: 976 LLRKCENKHIPNAVICINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTT 1035
Query: 280 VLMDVDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNCAY 321
++D DT +D+ G+IAV+ + + D N + + T C +
Sbjct: 1036 CVLDYDTVATADKFGNIAVIRLASSINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-F 1094
Query: 322 HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYE 380
H+GE +S++K + I +++ +TL G++ + +P +S E+++
Sbjct: 1095 HVGETVMSLQKATLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHD 1138
Query: 381 LLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
+ ++ + A HP PL G DH FRS PV+
Sbjct: 1139 FFQHLEMHMRAEHP---PLCGRDHLSFRSYYYPVKN 1171
>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
Length = 1215
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ I F Y +L D R V L+D DT V+D+ G+I+VL
Sbjct: 997 RVYVADVQESIHFVRYKRMENQLIIFADDTHPRYVTTMCLLDYDTVAVADKFGNISVLRL 1056
Query: 302 SDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSFIYKLPADDA 344
R D+ + N N C H+GE A+S+++ + I
Sbjct: 1057 PSRTSDDVDEDPTGNKSFWDRGVLNGASNKAEVLCNIHIGETALSLQRATLI-------- 1108
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGND 402
+++ +TL GSI + +P +S E+++ +A++ L + HP PL G D
Sbjct: 1109 --------PGGSESLVYTTLSGSIGVLVPFTSREDHDFFQALEMHLRSEHP---PLCGRD 1157
Query: 403 HSEFRSRENPVRK 415
H FRS PV+
Sbjct: 1158 HLAFRSFYFPVKN 1170
>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
Length = 688
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 422 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 478
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 479 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 538
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 539 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 582
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 583 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 640
Query: 413 VRK 415
V+
Sbjct: 641 VKN 643
>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
Length = 1227
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VRK 415
V+
Sbjct: 1180 VKN 1182
>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
Length = 1227
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VRK 415
V+
Sbjct: 1180 VKN 1182
>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
Length = 1227
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VRK 415
V+
Sbjct: 1180 VKN 1182
>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
Length = 1227
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VRK 415
V+
Sbjct: 1180 VKN 1182
>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
Length = 1227
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VRK 415
V+
Sbjct: 1180 VKN 1182
>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
Length = 1217
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 172/458 (37%), Gaps = 108/458 (23%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE 66
N F L TP+K HS+S LI++ TE N T + ++ + + E
Sbjct: 774 FNQISFPLEYTPRKFAIHSDSAHLIIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAV 833
Query: 67 TGKSMELVRVGHEQVLVVGTSLSSGPA--------IMPSG----EAESTKGRLIVLCIEH 114
+ + + E V + +GP I PS E + L LC+
Sbjct: 834 VARELAEAFLSEEPNEAVFGAPRAGPGLWASLIRIIAPSTGQTFEVHRLEQNLAALCLSL 893
Query: 115 MQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATE-QL-----SSSSLCSSPDDASCDGIK 168
++ ++ G F IVG A E QL S L + ++ C
Sbjct: 894 VKFANQGDQLFL---------------IVGIAKEFQLNPRVSSGGFLYTYKVNSECT--- 935
Query: 169 LEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGR 228
L L + TT + LAICPY R + + +R + +G+
Sbjct: 936 -------NLELVHKTTLDEVPLAICPYQGRVLVGVG--------------RMLRLYDMGK 974
Query: 229 TRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVA 277
+ + ++ + A RI V D ++ + Y +L D R +
Sbjct: 975 KKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWIT 1034
Query: 278 DCVLMDVDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNC 319
++D DT +D+ G+IAV+ + + D N + + T C
Sbjct: 1035 TTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC 1094
Query: 320 AYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EE 378
+H+GE +S++K + I +++ +TL G++ + +P +S E+
Sbjct: 1095 -FHVGETVMSLQKATLI----------------PGGSESLVYTTLSGTVGVLVPFTSHED 1137
Query: 379 YELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
++ + ++ + + HP PL G DH FRS P++
Sbjct: 1138 HDFFQHLEMHMRSEHP---PLCGRDHLSFRSYYYPIKN 1172
>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
Length = 1227
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VRK 415
V+
Sbjct: 1180 VKN 1182
>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
Length = 1217
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 112/275 (40%), Gaps = 65/275 (23%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
+E L L + TT + LAICPY R + + +R + +G+ +
Sbjct: 932 SECTNLELVHKTTLDEVPLAICPYQGRVLVGVG--------------RMLRLYDMGKKKL 977
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ ++ + A RI V D ++ + Y +L D R +
Sbjct: 978 LRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTC 1037
Query: 281 LMDVDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNCAYH 322
++D DT +D+ G+IAV+ + + D N + + T C +H
Sbjct: 1038 VLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FH 1096
Query: 323 MGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYEL 381
+GE +S++K + I +++ +TL G++ + +P +S E+++
Sbjct: 1097 VGETVMSLQKATLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDF 1140
Query: 382 LEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
+ ++ + + HP PL G DH FRS PV+
Sbjct: 1141 FQHLEMHMRSEHP---PLCGRDHLSFRSYYYPVKN 1172
>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
Length = 1228
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 999 YQIVNIQAMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 1058
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 1059 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1118
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I STL G++ F+P +S E+Y+ + ++ + +
Sbjct: 1119 TLI----------------PGGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLE--MHMR 1160
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1161 NENPPLCGRDHLSYRSSYYPVKN 1183
>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
Length = 1225
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 996 YQIVNIQAMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 1055
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 1056 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1115
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I STL G++ F+P +S E+Y+ + ++ + +
Sbjct: 1116 TLI----------------PGGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLE--MHMR 1157
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1158 NENPPLCGRDHLSYRSSYYPVKN 1180
>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
Length = 1228
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 999 YQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 1058
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 1059 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1118
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I STL G++ F+P +S E+Y+ + ++ + +
Sbjct: 1119 TLI----------------PGGSEALIYSTLSGTVGAFVPFTSREDYDFFQHLE--MHMR 1160
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1161 NENPPLCGRDHLSYRSSYYPVKN 1183
>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
(Spliceosome-associated protein 130) (SAP 130)
(Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130)
(STAF130) [Ciona intestinalis]
Length = 1216
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 133/328 (40%), Gaps = 56/328 (17%)
Query: 110 LCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG--- 166
+C+E QN S+ C +S +VG A E L +P A G
Sbjct: 878 ICLE--QNEAALSIAICKFPNNSDDTFV----LVGVACE------LLINPRQARGGGEIH 925
Query: 167 -IKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFA 225
K+ E E +L L + T + AICPY R L G + + + +R+
Sbjct: 926 TYKINE-EGNKLELVHKTVVDEVPSAICPYQGR-VLIGVGKLLRI--YDLGKKKLLRKCE 981
Query: 226 VGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + A RI V D ++ + + Y +L D R V ++D +
Sbjct: 982 NKHIPNYIASIQAVGHRIIVCDVQESVHWVRYRRHENQLVVFADDTYPRWVTSATVLDWN 1041
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAV 328
T VSD+ G+I+VL +D ++D+ S L C YH+GE +
Sbjct: 1042 TVAVSDKFGNISVLRLPSDVNDDVQDDPSGTKALWTRGILNGAMQKCEVLCMYHVGETVL 1101
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K + I +++ +TL GSI + +P +S E+++ + ++
Sbjct: 1102 SLQKTTLI----------------PGGSESLVYTTLSGSIGMLVPFTSHEDHDFFQHLE- 1144
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVRK 415
+ + PLLG DH +RS PV+
Sbjct: 1145 -MHMRNECPPLLGRDHLAYRSYYFPVKN 1171
>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
Length = 1175
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 53/259 (20%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMI 233
+++RL ++T G+ A+ Y + +C + R+R +A+G+ + ++
Sbjct: 909 NYEIRLLHATPITGVPRALAGYEGKL----------ICALGS----RLRLYALGKRQLLL 954
Query: 234 ------------MLLTAHFTRIAVGDCRDGILFYS---YHEDARKLEQIYCDPSQRLVAD 278
+ ++ +RI GD R+G Y EDA + E I R ++
Sbjct: 955 KAEHRTCTDHGFIWISVCGSRIFAGDIREGFQLLRLRFYAEDAAEFEWIGHSTGPRWLSC 1014
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
C +D T + D+ S+ + ++ + + +H+G++ +I K SF
Sbjct: 1015 CEQLDYHTVIGGDKFDSLFIARVP---QEEFTKATQFENHAQFHLGDLPTAISKVSF--- 1068
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-HPLTA 396
SQ +I ST+LGSI FIP ++ +E +L++ ++ +A HP
Sbjct: 1069 -------------NNMSQPIVIYSTILGSIGAFIPYANKDELDLMQHLEMIMANEHP--- 1112
Query: 397 PLLGNDHSEFRSRENPVRK 415
PL G +H+ FRS PV+
Sbjct: 1113 PLCGREHAFFRSYYYPVQN 1131
>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
Length = 1228
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 999 YQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 1058
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 1059 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1118
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I +TL G++ F+P +S E+Y+ + ++ + +
Sbjct: 1119 TLI----------------PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMR 1160
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1161 NENPPLCGRDHLSYRSSYYPVKN 1183
>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
Length = 1273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 1044 YQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 1103
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 1104 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1163
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I +TL G++ F+P +S E+Y+ + ++ + +
Sbjct: 1164 TLI----------------PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMR 1205
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1206 NENPPLCGRDHLSYRSSYYPVKN 1228
>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
Length = 1229
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 1000 YQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 1059
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 1060 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1119
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I +TL G++ F+P +S E+Y+ + ++ + +
Sbjct: 1120 TLI----------------PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMR 1161
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1162 NENPPLCGRDHLSYRSSYYPVKN 1184
>gi|147777738|emb|CAN75738.1| hypothetical protein VITISV_025903 [Vitis vinifera]
Length = 501
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
AVQARLA+H LTAP+LGNDH+EFRSREN VRK
Sbjct: 379 AVQARLAVHQLTAPILGNDHNEFRSRENSVRK 410
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 326 IAVSIRKGSFIYKLPADDALGDCLAS---FESSQTTIIASTLLGSIVIFIPIS 375
+A ++ GSF YKLPADD L C S + S+ +I+A TLLGSI++ IPIS
Sbjct: 1 MARALFLGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSIIMLIPIS 53
>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
Length = 1227
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 998 YQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 1057
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 1058 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1117
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I +TL G++ F+P +S E+Y+ + ++ + +
Sbjct: 1118 TLI----------------PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMR 1159
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1160 NENPPLCGRDHLSYRSSYYPVKN 1182
>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
Full=Pre-mRNA-processing protein 12; AltName:
Full=Spliceosome-associated protein 130
gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe]
Length = 1206
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 39/260 (15%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E +L L T G+ +A+ P+ R LA G + N + +R+ +
Sbjct: 923 EGKKLELISHTEIDGIPMALTPFQGR-MLAGVGRFLRIYDL--GNKKMLRKGELSAVPLF 979
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I +T +RI V D + + F Y + L D R VL+D DT D+
Sbjct: 980 ITHITVQASRIVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGDK 1039
Query: 293 KGSIAVLSCSDRL-----EDNA-------SPECNLTPN-----CAYHMGEIAVSIRKGSF 335
G+I +L C + + E+N+ P N TP+ + +I S++K
Sbjct: 1040 FGNIWLLRCPEHVSKLADEENSESKLIHEKPFLNSTPHKLDLMAHFFTNDIPTSLQKVQL 1099
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ E ++ ++ + LLG++ +F P I+ E+ + Q +
Sbjct: 1100 V----------------EGAREVLLWTGLLGTVGVFTPFINQEDVRFFQ--QLEFLLRKE 1141
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1142 CPPLAGRDHLAYRSYYAPVK 1161
>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
Length = 1217
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 39/263 (14%)
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+++T QL + T A+CP+ R LA G + + + +R+
Sbjct: 931 DSQTHQLEHMHRTEIDDAPGALCPFQGR-LLAGIGKVLRI--YDLGKKKLLRKCENKHIP 987
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ + R+ V D ++ + Y +L D R + L+D DT
Sbjct: 988 NQIVNIQGMGQRVYVSDVQESVYCIKYKRAENQLIIFADDTHPRWITSASLLDYDTVATG 1047
Query: 291 DRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKG 333
D+ G+IA+L S SD ++++ + L C +H+GEI +S++K
Sbjct: 1048 DKFGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKA 1107
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I ++I +T+ G++ +P +S E+Y+ + ++ + +
Sbjct: 1108 TLI----------------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLE--MHMR 1149
Query: 393 PLTAPLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1150 NENPPLCGRDHLSYRSYYYPVKN 1172
>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
Length = 1258
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 48/267 (17%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E++ L+L + T G+ A+ P+ R +A G+ P P +R + +G+ R +
Sbjct: 972 ESYNLQLIHVTPLEGVPSAMYPFEGRLLVALRGS-------PTVAPV-LRIYELGKKRLL 1023
Query: 233 -------------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADC 279
IM L + RI D RD IL + +++ I D R +
Sbjct: 1024 KKCEYKFLPESGGIMWLDVNKDRIFAADSRDSILVLRWRYSDNQMQVISDDTYPRCITAA 1083
Query: 280 VLMDVDTAVVSDRKGSIAVLSCSD---------RLEDNASPEC-NLTPNCAYHMGEIAVS 329
++D +T VV D+ +IAVL R D AS + +H+GE S
Sbjct: 1084 AVLDYNTIVVGDKFDNIAVLRVPGDAKDAGAWGRDNDYASGNTFKMDLIGHFHVGETITS 1143
Query: 330 IRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQAR 388
+++ + + +I ST+LG+I P SS+ E+ L+A++
Sbjct: 1144 LQRVTMV----------------AGGAEIVIYSTVLGTIGALYPFSSKREHGFLQALEMH 1187
Query: 389 LAIHPLTAPLLGNDHSEFRSRENPVRK 415
+ + L G +H +RS +P++
Sbjct: 1188 MRNTAASPSLTGREHVMYRSFYHPIKN 1214
>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
Length = 1223
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
Query: 167 IKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAV 226
KLEE T +L + T + V A+ P+ R L GN ++ + + R A
Sbjct: 934 FKLEEDGT-KLTFVHKTKFDQPVYALLPFHGRLALG-VGNELFIYDI---GQKALLRKAR 988
Query: 227 GR-TRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
G+ T I+ L +H RI GD +G+ + Y +L D QR ++D +
Sbjct: 989 GQATPNQIVSLESHGQRIICGDVSEGVTYMVYKPGYNRLIPFVDDVVQRWTTGTTMIDYE 1048
Query: 286 TAVVSDRKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMG--EIAVSIRKGSFIYKLPA 341
T D+ G++ V+ C ++ A E N ++G + +R + +P
Sbjct: 1049 TTAGGDKFGNLWVVRCPEQPSQEADEEGAGGFIMNERSYLGGAPYRLDLRAHYYCQDIPM 1108
Query: 342 DDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLG 400
+A Q + S L G++ + +P ++ E+ E +++ +L I PL G
Sbjct: 1109 SLQRTALVA---GGQEVLFWSGLQGTLGMLVPFVTREDVEFFTSLEQQLRIE--DPPLAG 1163
Query: 401 NDHSEFRSRENPVR 414
DH +RS PV+
Sbjct: 1164 RDHLMYRSYYVPVK 1177
>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
Length = 1201
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 111/275 (40%), Gaps = 65/275 (23%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
TE + L + + + LAICPY R + + +R + +G+ +
Sbjct: 916 TECTSIELLHKSPLDEVPLAICPYQGRVLVGVG--------------RMLRLYDMGKKKL 961
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ ++ + A RI V D ++ + Y +L D R +
Sbjct: 962 LRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRFITTTC 1021
Query: 281 LMDVDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNCAYH 322
++D DT +D+ G+IAV+ + + D N + + T C +H
Sbjct: 1022 VLDYDTVATADKYGNIAVIRLATGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FH 1080
Query: 323 MGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYEL 381
+GE +S++K + I +++ +TL G++ + +P +S E+++
Sbjct: 1081 VGETVMSLQKATLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDF 1124
Query: 382 LEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
+ ++ + + HP PL G DH FRS PV+
Sbjct: 1125 FQHLEMHMRSEHP---PLCGRDHLSFRSYYYPVKN 1156
>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
Length = 1214
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 219 QRVRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267
+++R + +G+ + + ++ + + RI V D ++ + F Y + +L I
Sbjct: 962 KKIRLYDLGKKKLLAKCENKQLPVQVVDIRSMGQRIVVSDSQESLHFMRYKKQDNQL-SI 1020
Query: 268 YCD-PSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN---CAYHM 323
+CD S R V ++D DT V DR GSIAVL RL + E P +
Sbjct: 1021 FCDDTSPRFVTCICILDYDTVAVGDRFGSIAVL----RLPKGVTEEVQEDPTGVRALWDR 1076
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT------IIASTLLGSIVIFIP-ISS 376
G + + +K I + +GD + S + + ++ +T+ G+I + +P +S
Sbjct: 1077 GNLNGASQKVEHIGQF----YVGDTVTSMQKTSLVPGANDCLVYTTISGTIGMLVPFVSR 1132
Query: 377 EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+E++ + ++ L + PL G DH FRS PV+
Sbjct: 1133 DEFDFFQNLEMHLRVE--FPPLCGRDHLAFRSFYFPVK 1168
>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1209
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 19/233 (8%)
Query: 190 LAICPYLDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247
+A+ P+ R LA G Y G Q +R+ T +I+ L + RI VGD
Sbjct: 942 MALIPFQGR-LLAGVGKTLRIYDLGLK----QLLRKAQADVTPTLIVSLQSQGNRIIVGD 996
Query: 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRL-E 306
+ G+ + Y + +L D R ++D ++ D+ G+I+++ C +R+ +
Sbjct: 997 LQQGVTYVVYKAEGNRLIPFVDDTLNRWTTCTTMVDYESVASGDKFGNISIVRCPERVSQ 1056
Query: 307 DNASP--ECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDCLASFE-SSQTTIIAS 362
D P E +L Y H +S++ F LP C S Q ++ S
Sbjct: 1057 DTDEPGSEIHLMHARNYLHGTPNRLSLQVHFFTQDLPT----SICKTSLVVGGQDVLLWS 1112
Query: 363 TLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
L G++ +FIP +S E+ + + ++ + PL G DH +R PV+
Sbjct: 1113 GLQGTVGVFIPFVSREDVDFFQNLENHMRAE--DPPLAGRDHLIYRGYYTPVK 1163
>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
Length = 1221
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 39/262 (14%)
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+ E +L + T LA+ P+ + LA G V Q +R+
Sbjct: 926 QEEGRELEFIHKTKIEEPALALIPFQGK-LLAGVGKTLRVYDL--GMRQMLRKAQAEVAP 982
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ L +RI VGD + G+ + +Y KL D R + ++D ++
Sbjct: 983 QQIVSLNTQGSRIIVGDVQQGVTYVTYKPTTNKLIPFADDIIARWITCTTMVDYESVAGG 1042
Query: 291 DRKGSIAVLSCSDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRKG 333
D+ G++ ++ C + + A E + L C ++ +I S+ K
Sbjct: 1043 DKFGNMFIVRCPPKASEEADEEQSGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKT 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + Q ++ S L+G+I +FIP IS E+ + +++++ L
Sbjct: 1103 SLVV----------------GGQDVLLWSGLMGTIGVFIPLISREDADFFQSLESHLRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1147 --DPPLAGRDHLMYRSYYAPVK 1166
>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R + Q +R + +G+ + +
Sbjct: 935 LELVHKTPVDGVPTALCQFQGRLLVGVG--------------QVLRIYDLGKRKLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + + +D D
Sbjct: 981 NKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ V+ S+ +ED+ + N PN +H+GE+
Sbjct: 1041 TMAGADKFGNVYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I +++ T++GS+ +P SS E+ + ++
Sbjct: 1101 SLQKASLI----------------PGGGESVLYGTIMGSVGALLPFSSREDVDFFSHLEM 1144
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
L PL G DH FRS PV+
Sbjct: 1145 HLRQE--NPPLCGRDHMAFRSAYFPVK 1169
>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 105/267 (39%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R + Q +R + +G+ + +
Sbjct: 935 LELVHKTPVDGVPTALCQFQGRLLVGVG--------------QVLRIYDLGKRKLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + + +D D
Sbjct: 981 NKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I V+ S+ +ED+ + N PN +H+GE+
Sbjct: 1041 TMAGADKFGNIYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I +++ T++GS+ +P SS E+ + ++
Sbjct: 1101 SLQKASLI----------------PGGGESVLYGTIMGSMGALLPFSSREDVDFFSHLEM 1144
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
L PL G DH FRS PV+
Sbjct: 1145 HLRQE--NPPLCGRDHMGFRSAYFPVK 1169
>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
Length = 1205
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 200 FLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHE 259
LA G A + +++ R A ++ I+ L +RI +GD ++ LF Y E
Sbjct: 947 LLAGVGKALRIYDL---GKKKLLRKAETKSPTAIVSLATQGSRIVIGDMQESTLFAVYKE 1003
Query: 260 DARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN 318
+L I+ D +Q R V+ ++D +T V D+ G+I V +RL+ S + + P
Sbjct: 1004 AENRL-LIFGDDTQPRWVSAMTMVDYNTVAVGDKFGNIFV----NRLDSTISDQVDEDPT 1058
Query: 319 CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLLGSIVIFI 372
A + E A ++ K+ A +GD + S + ++ + L G+I I +
Sbjct: 1059 GAGILHEKA-TLNGAPHKTKMLAHFHVGDIITSIHKVSLVVGGREVLLYTGLQGTIGILV 1117
Query: 373 PISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
P++S E+ E L ++ I L+G DH +R PV+
Sbjct: 1118 PLTSKEDIEFLTMLEQH--IRNEQGSLVGRDHLSWRGYYVPVK 1158
>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
Length = 1212
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 39/262 (14%)
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+ E +L + T LA+ P+ + LA G V Q +R+
Sbjct: 926 QEEGRELEFIHKTKIEEPALALIPFQGK-LLAGVGKTLRVYDL--GMRQMLRKAQAEVAP 982
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ L +RI VGD + G+ + +Y KL D R ++D ++
Sbjct: 983 QQIVSLNTQGSRIIVGDIQQGVTYVTYKPTTNKLIPFADDTIARWTTCTTMVDYESVAGG 1042
Query: 291 DRKGSIAVLSCSDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRKG 333
D+ G++ ++ C + + A E + L C ++ +I S+ K
Sbjct: 1043 DKFGNMFIVRCPPKASEEADEEQSGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKT 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + Q ++ S L+G+I +FIP IS E+ + +++++ L
Sbjct: 1103 SLVV----------------GGQDVLLWSGLMGTIGVFIPLISREDADFFQSLESHLRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1147 --DPPLAGRDHLMYRSYYAPVK 1166
>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
Length = 1221
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
++ L A +RI VGD ++ I+F SY +L D + V C ++D DT +D+
Sbjct: 993 VVSLDAQGSRIVVGDMQESIIFASYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADK 1052
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G+I VL RL+ N S + P + E V + + L A +GD + S
Sbjct: 1053 FGNIYVL----RLDGNTSRSVDEDPTGMTIVHEKPV-LMGAAHKASLVAHFFVGDIITSL 1107
Query: 353 ESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ + ++ + L GSI +P +S E+ + L +++ L ++G DH
Sbjct: 1108 HRTAMVAGGREVLLYTGLSGSIGALVPFVSKEDVDTLSTLESHLRQE--NNSIVGRDHLA 1165
Query: 406 FRSRENPVR 414
+RS PV+
Sbjct: 1166 YRSSYAPVK 1174
>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
Length = 1217
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 111/275 (40%), Gaps = 65/275 (23%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
+E L L + + + LAICPY R + + +R + +G+ +
Sbjct: 932 SECTNLELLHKSPLDEVPLAICPYQGRVLVGVG--------------RMLRLYDMGKKKL 977
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ ++ + A RI V D ++ + Y +L D R +
Sbjct: 978 LRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTC 1037
Query: 281 LMDVDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNCAYH 322
++D DT +D+ G+IAV+ + + D N + + T C +H
Sbjct: 1038 VLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FH 1096
Query: 323 MGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYEL 381
+GE +S++K + I +++ +TL G++ + +P +S E+++
Sbjct: 1097 VGETVMSLQKATLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDF 1140
Query: 382 LEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
+ ++ + + HP PL G DH FRS PV+
Sbjct: 1141 FQHLEMHMRSEHP---PLCGRDHLSFRSYYYPVKN 1172
>gi|85682925|gb|ABC73438.1| CG13900 [Drosophila miranda]
Length = 341
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 36/196 (18%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ + A R+ V D ++ + F Y +L D R V L+D DT ++
Sbjct: 164 YQIVNIQAMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIA 223
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPN-----------------CAYHMGEIAVSIRKG 333
D+ G++++ + D+ + T + C++H+GEI +S++K
Sbjct: 224 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 283
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I +I STL G++ F+P +S E+Y+ + ++ + +
Sbjct: 284 TLI----------------PGGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLE--MHMR 325
Query: 393 PLTAPLLGNDHSEFRS 408
PL G DH +RS
Sbjct: 326 NENPPLCGRDHLSYRS 341
>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1213
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 49/262 (18%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL L + T + LA+ + R +A G A + + + +R+ + I+
Sbjct: 931 QLELVHKTEIDDVPLALMAFQGR-LVAGVGKALRI--YDIGKKKMLRKVENKQFGSAIVT 987
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKG 294
L+ +RI VGD ++ I F Y +L I+ D SQ R ++ ++D +T V +DR G
Sbjct: 988 LSTQGSRILVGDMQESIFFAVYKAPENRL-LIFADDSQPRWISAATMVDYNTVVAADRFG 1046
Query: 295 SIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKG 333
+I V +RL+ S + + P C +H+G++ SI K
Sbjct: 1047 NIFV----NRLDPRVSDQVDEDPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKV 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + + ++ + L G+I I +P ++ E+ + + ++ +
Sbjct: 1103 SLV----------------AGGREVLLYTGLHGTIGILVPFVTKEDVDFISTLEQHMRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
++ L+G DH +R PV+
Sbjct: 1147 QVS--LVGRDHLGWRGYYVPVK 1166
>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
bisporus H97]
Length = 1213
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 49/262 (18%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL L + T + LA+ + R +A G A + + + +R+ + I+
Sbjct: 931 QLELVHKTEIDDVPLALMAFQGR-LVAGVGKALRI--YDIGKKKMLRKVENKQFGSAIVT 987
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKG 294
L+ +RI VGD ++ I F Y +L I+ D SQ R ++ ++D +T V +DR G
Sbjct: 988 LSTQGSRILVGDMQESIFFAVYKAPENRL-LIFADDSQPRWISAATMVDYNTVVAADRFG 1046
Query: 295 SIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKG 333
+I V +RL+ S + + P C +H+G++ SI K
Sbjct: 1047 NIFV----NRLDPRVSDQVDEDPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKV 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + + ++ + L G+I I +P ++ E+ + + ++ +
Sbjct: 1103 SLV----------------AGGREVLLYTGLHGTIGILVPFVTKEDVDFISTLEQHMRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
++ L+G DH +R PV+
Sbjct: 1147 QVS--LVGRDHLGWRGYYVPVK 1166
>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
[Rhipicephalus pulchellus]
Length = 1259
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 113/271 (41%), Gaps = 65/271 (23%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM--- 232
+L L ++T+ A+CP+ R LA G +R + +GR + +
Sbjct: 933 RLELVHATSVEEAPTALCPFQGR-LLAGVGKC-------------LRLYDLGRKKLLRKC 978
Query: 233 --------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
I+ + + R+ VGD ++ F Y +L D R + ++D
Sbjct: 979 ENKYIPSAIVSIQSMGNRVVVGDVQESFFFLRYKRQENQLVIFADDAVPRWITASCMLDY 1038
Query: 285 DTAVVSDRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGE 325
DT +D+ G+++++ S SD ++++ +S + + N +H+GE
Sbjct: 1039 DTVAGADKFGNVSIIRLPNSVSDEVDEDPTGIKSLWDRGWLGGSSQKAEVISN--FHIGE 1096
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEA 384
+S++K + I +++ TL G+I + +P ++ E+++ +
Sbjct: 1097 TVLSLQKATLI----------------PGGSESLVYVTLSGTIGVLVPFTAHEDHDFFQH 1140
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
++ + + PL G DH FRS PV+
Sbjct: 1141 LE--MHMRSENPPLCGRDHLSFRSSYFPVKN 1169
>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
Length = 1209
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 190 LAICPYLDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247
LA+ P+ R LA G Y G Q +R+ T +I+ L + RI VGD
Sbjct: 942 LALIPFQGR-LLAGVGKTLRIYDLGLK----QLLRKAQADVTPTLIVSLQSQGNRIIVGD 996
Query: 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLE- 306
+ GI + Y + +L D R ++D ++ D+ G+I ++ C +R+
Sbjct: 997 LQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQ 1056
Query: 307 --DNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDCLASFE-SSQTTIIAS 362
D E +L Y H +S++ + LP C S Q ++ S
Sbjct: 1057 ETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPT----SICKTSLVVGGQDVLLWS 1112
Query: 363 TLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
L G++ +FIP +S E+ + + ++ + PL G DH +R PV+
Sbjct: 1113 GLQGTVGVFIPFVSREDVDFFQNLENHMRAE--DPPLAGRDHLIYRGYYTPVK 1163
>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
Length = 1209
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 190 LAICPYLDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247
LA+ P+ R LA G Y G Q +R+ T +I+ L + RI VGD
Sbjct: 942 LALIPFQGR-LLAGVGKTLRIYDLGLK----QLLRKAQADVTPTLIVSLQSQGNRIIVGD 996
Query: 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLE- 306
+ GI + Y + +L D R ++D ++ D+ G+I ++ C +R+
Sbjct: 997 LQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQ 1056
Query: 307 --DNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDCLASFE-SSQTTIIAS 362
D E +L Y H +S++ + LP C S Q ++ S
Sbjct: 1057 ETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPT----SICKTSLVVGGQDVLLWS 1112
Query: 363 TLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
L G++ +FIP +S E+ + + ++ + PL G DH +R PV+
Sbjct: 1113 GLQGTVGVFIPFVSREDVDFFQNLENHMRAE--DPPLAGRDHLIYRGYYTPVK 1163
>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
Length = 1192
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 190 LAICPYLDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247
LA+ P+ R LA G Y G Q +R+ T +I+ L + RI VGD
Sbjct: 925 LALIPFQGR-LLAGVGKTLRIYDLGLK----QLLRKAQADVTPTLIVSLQSQGNRIIVGD 979
Query: 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLE- 306
+ GI + Y + +L D R ++D ++ D+ G+I ++ C +R+
Sbjct: 980 LQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQ 1039
Query: 307 --DNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDCLASFE-SSQTTIIAS 362
D E +L Y H +S++ + LP C S Q ++ S
Sbjct: 1040 ETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPT----SICKTSLVVGGQDVLLWS 1095
Query: 363 TLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
L G++ +FIP +S E+ + + ++ + PL G DH +R PV+
Sbjct: 1096 GLQGTVGVFIPFVSREDVDFFQNLENHMRAE--DPPLAGRDHLIYRGYYTPVK 1146
>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
Length = 1287
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
R+ V D ++ + Y +L D R V L+D DT D+ G+IAVL
Sbjct: 1069 RVYVSDVQESVYCLKYKRPENQLIIFADDTHPRWVTSATLLDYDTVATGDKFGNIAVLRL 1128
Query: 300 --SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSFIYKLPADDA 344
S SD ++++ + L C +H+GEI +S++K + I
Sbjct: 1129 PHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKATLI-------- 1180
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDH 403
++I +T+ G++ +P +S E+Y+ + ++ + PL G DH
Sbjct: 1181 --------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLEMHMRNE--NPPLCGRDH 1230
Query: 404 SEFRSRENPVRK 415
+RS PV+
Sbjct: 1231 LSYRSYYYPVKN 1242
>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
Length = 1192
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 190 LAICPYLDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247
LA+ P+ R LA G Y G Q +R+ T +I+ L + RI VGD
Sbjct: 925 LALIPFQGR-LLAGVGKTLRIYDLGLK----QLLRKAQADVTPTLIVSLQSQGNRIIVGD 979
Query: 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLE- 306
+ GI + Y + +L D R ++D ++ D+ G+I ++ C +R+
Sbjct: 980 LQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQ 1039
Query: 307 --DNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDCLASFE-SSQTTIIAS 362
D E +L Y H +S++ + LP C S Q ++ S
Sbjct: 1040 ETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPT----SICKTSLVVGGQDVLLWS 1095
Query: 363 TLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
L G++ +FIP +S E+ + + ++ + PL G DH +R PV+
Sbjct: 1096 GLQGTVGVFIPFVSREDVDFFQNLENHMRAE--DPPLAGRDHLIYRGYYTPVK 1146
>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
Length = 1219
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 176/430 (40%), Gaps = 51/430 (11%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE 66
N F L TP+K + H ES L+++ TE N T + ++ + + E E
Sbjct: 775 FNQVSFPLEYTPRKFIIHPESNNLLIIETEHNAYTEETKKQRRLQMAEEMKEAAGEEEQE 834
Query: 67 TGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEA--ESTKGRLIVLCIEHMQNSDCGSMT 124
K M + + + ++ +G + S + +G ++ CI QN S
Sbjct: 835 LAKEMADAFLNEDLPESIFSAPKAGHGMWASTLKIMDPVQG-IVHKCIRLEQNEAAMSSV 893
Query: 125 FCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTT 184
K + Q+T IVG + + + C++ D K++ +L + T
Sbjct: 894 LV-KFQNQPQQT--LFLIVGISKDFQLNPRHCNT---GFLDTYKMDPMGR-ELEFVHRTP 946
Query: 185 WPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIA 244
+ +A+C Y + LA G + + + +R+ I+ + A RI
Sbjct: 947 VDEVPMALCAY-NGLLLAGVGRMLRL--YDMGKKKLLRKCENKHIPNAIVNIQAMGKRIF 1003
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVA-DCVLMDVDTAVVSDRKGSIAVL---- 299
V D ++ + Y +L D R V +CVL D DT V+D+ G+IA+L
Sbjct: 1004 VSDVQESVFMVRYKRAENQLIIFADDTHPRWVTCNCVL-DYDTVAVADKFGNIAILRLPP 1062
Query: 300 SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSFIYKLPADDALG 346
+ SD +E++ + +L +H+GE ++K + I
Sbjct: 1063 NVSDDVEEDPTGHKSLWDRGLLNGASQKADTIATFHVGETVTWLQKATLI---------- 1112
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ES +I +TL GS+ + +P +S E+++ + ++ + + +PL G DH
Sbjct: 1113 --PGGWES----LIYTTLSGSVGVLVPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLS 1164
Query: 406 FRSRENPVRK 415
FRS PV+
Sbjct: 1165 FRSYYFPVKN 1174
>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
Length = 1207
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R LA G Q +R + +G+ + +
Sbjct: 928 LELVHKTPIDGVPTALCQFQGR-LLAGIG-------------QILRIYDLGKRKLLRKCE 973
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + ++ RI VGD ++ + Y D +L D S R + + +D D
Sbjct: 974 NKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFD 1033
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T D+ G++ + S+ +ED+ + N PN +H+GE+
Sbjct: 1034 TMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1093
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I ++I T++GS+ +P SS E+ + ++
Sbjct: 1094 CMQKASLI----------------PGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEM 1137
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ HP PL G DH FRS PV+
Sbjct: 1138 HMRQEHP---PLCGRDHMAFRSAYFPVK 1162
>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
Length = 1197
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 219 QRVRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267
++VR + +G+ + + ++ + + RI V D ++ + F Y + +L I
Sbjct: 945 KKVRLYDLGKRKLLAKCENRQIPTQVVDIRSMGQRIVVSDSQESVHFMRYKKQDGQL-SI 1003
Query: 268 YCDPSQRLVADCV-LMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN---CAYHM 323
+CD + CV L+D DT V DR G+IAVL RL + E P +
Sbjct: 1004 FCDETSPRYVTCVCLLDYDTVAVGDRFGNIAVL----RLPKGVTEEVQEDPTGVRALWDR 1059
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT------IIASTLLGSIVIFIP-ISS 376
G + + +K I L +GD + S + + + +T+ G I I +P +S
Sbjct: 1060 GNLNGASQKLEAIAHL----YIGDAITSMQKTSLVPGANDCLCYTTISGIIGILVPFMSR 1115
Query: 377 EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+E+E + ++ + + PL G DH +RS PV+
Sbjct: 1116 DEFEFFQNLEMHMRVE--YPPLCGRDHLAYRSYYFPVK 1151
>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
Length = 1207
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R LA G Q +R + +G+ + +
Sbjct: 928 LELVHKTPIDGVPTALCQFQGR-LLAGIG-------------QILRIYDLGKRKLLRKCE 973
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + ++ RI VGD ++ + Y D +L D S R + + +D D
Sbjct: 974 NKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFD 1033
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T D+ G++ + S+ +ED+ + N PN +H+GE+
Sbjct: 1034 TMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1093
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I ++I T++GS+ +P SS E+ + ++
Sbjct: 1094 CMQKASLI----------------PGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEM 1137
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ HP PL G DH FRS PV+
Sbjct: 1138 HMRQEHP---PLCGRDHMAFRSAYFPVK 1162
>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
Length = 1232
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 104/271 (38%), Gaps = 67/271 (24%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L + T M A+ P+ R +A GN VR + +GR + +
Sbjct: 951 KLDFVHRTEVEAMPCALTPFAGR-LIAGVGNI-------------VRIYDMGRKKLLRKC 996
Query: 236 LTAHF-----------TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMD 283
H TR+ V D R+ + F Y L ++CD + R +++D
Sbjct: 997 ENKHLPSRVVDIEVMGTRVVVADQRESVFFLKYKPTENVL-SVFCDDTTPRWCTAMLMVD 1055
Query: 284 VDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGE 325
T V+D+ G+++VL C D + D N +P+ L +++GE
Sbjct: 1056 YSTVCVADKFGNVSVLRCPDDVTDTLQEDPSGAKAFWARGYLNGAPQ-KLVQVANFYIGE 1114
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPIS-SEEYELLEA 384
I S+ K + S I +TL GSI +P S E+ E +
Sbjct: 1115 IVQSLHKTTLT----------------PSGTECIAYTTLSGSIGALMPFSHKEDAEFFQT 1158
Query: 385 VQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP P+ G DH FRS P +
Sbjct: 1159 LELHLRQEHP---PICGRDHLAFRSAYVPCK 1186
>gi|53136520|emb|CAG32589.1| hypothetical protein RCJMB04_30d19 [Gallus gallus]
Length = 503
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 46/196 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 285 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 340
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 341 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 396
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 397 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 441
Query: 399 LGNDHSEFRSRENPVR 414
G DH FRS PV+
Sbjct: 442 CGRDHLSFRSYYFPVK 457
>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1201
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R + Q +R + +G+ + +
Sbjct: 922 LELVHKTPVDGVPTALCQFQGRLLVGVG--------------QVLRIYDLGKRKLLRKCE 967
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + + +D D
Sbjct: 968 NKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFD 1027
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ V+ S+ +ED+ + N PN +H+GE+
Sbjct: 1028 TMAGADKFGNVYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVDEIIQFHVGEVVT 1087
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I +++ T++GS+ +P SS E+ + ++
Sbjct: 1088 SLQKASLI----------------PGGGESMLYGTVMGSMGALLPFSSREDVDFFSHLEM 1131
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
L PL G DH FRS PV+
Sbjct: 1132 HLRQE--NPPLCGRDHMAFRSAYFPVK 1156
>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
Length = 1217
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 65/257 (25%)
Query: 190 LAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM-----------IMLLTA 238
LAICPY R + + +R + +G+ + + ++ + A
Sbjct: 950 LAICPYQGRVLVGVG--------------RMLRLYDMGKKKLLRKCENKHIPNAVVSINA 995
Query: 239 HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV 298
RI V D ++ + Y +L D R + ++D DT +D+ G+IAV
Sbjct: 996 IGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAV 1055
Query: 299 LSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLP 340
+ + + D N + + T C +H+GE +S++K + I
Sbjct: 1056 IRLATGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKATLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G++ + +P +S E+++ + ++ + + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYYPVKN 1172
>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
Length = 1212
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 14/189 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ LT+ +RI VG+ ++ + + +Y ++ +L D S R V L+D DT V D+
Sbjct: 984 IVTLTSQGSRIIVGEMQESVHYATYKPESNRLLVFADDTSARWVTSAALVDYDTVAVGDK 1043
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G+I V +RL N S + + P A M E + KL A +GD + S
Sbjct: 1044 FGNIFV----NRLPANISQQVDDDPTGAGIMHEREF-LHGAPHKTKLLAHYNVGDIVTSV 1098
Query: 353 ESSQTT-----IIAST-LLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ ++A T L G+I + IP++S E+ + + ++ + + L+G DH
Sbjct: 1099 HRAALVPGGRDVVAYTGLHGTIGVLIPLASKEDVDFITTLEQHMRSE--HSSLVGRDHLA 1156
Query: 406 FRSRENPVR 414
+R PV+
Sbjct: 1157 YRGYYVPVK 1165
>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
Length = 1217
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 65/257 (25%)
Query: 190 LAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM-----------IMLLTA 238
LAICPY R + + +R + +G+ + + ++ + A
Sbjct: 950 LAICPYQGRVLVGVG--------------RMLRLYDMGKKKLLRKCENKHIPNAVVSINA 995
Query: 239 HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV 298
RI V D ++ + Y +L D R + ++D DT +D+ G+IAV
Sbjct: 996 IGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAV 1055
Query: 299 LSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLP 340
+ + + D N + + T C +H+GE +S++K + I
Sbjct: 1056 IRLATGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKATLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G++ + +P +S E+++ + ++ + + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYYPVKN 1172
>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 934 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKKRLLRKCE 979
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ F Y D +L D R + +D D
Sbjct: 980 NKLFPNSIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTASYHVDFD 1039
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVN 1099
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I P G+C I+ T++GS+ +P +S ++ + ++
Sbjct: 1100 SLQKASLI---PGG---GEC----------IMYGTVMGSVGALLPFTSRDDVDFFSHLEM 1143
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
L HP PL G DH +RS PV+
Sbjct: 1144 HLRQDHP---PLCGRDHMAYRSAYFPVK 1168
>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
Length = 1217
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
Length = 1225
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1007 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 1062
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1063 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1118
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1119 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1163
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1164 CGRDHLSFRSYYFPVKN 1180
>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
Length = 1181
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV-LMDVDTAVVSDRKGSIAVLS 300
RI V D ++ + F Y + +L I+CD + CV L+D DT V DR G++AVL
Sbjct: 963 RIVVSDSQESVHFMRYKKQDGQLS-IFCDETSPRYVTCVCLLDYDTVAVGDRFGNVAVL- 1020
Query: 301 CSDRLEDNASPECNLTPN---CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQT 357
RL + E P + G + + +K I L +GD + S + +
Sbjct: 1021 ---RLPKGVTEEVQEDPTGVRALWDRGNLNGASQKLEAIAHL----YIGDAITSMQKTSL 1073
Query: 358 TIIA------STLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
A +T+ G I I +P +S +E+E + ++ + + PL G DH +RS
Sbjct: 1074 VPGANDCLSYTTISGIIGILVPFMSRDEFEFFQNLEMHMRVE--YPPLCGRDHLAYRSYY 1131
Query: 411 NPVR 414
PV+
Sbjct: 1132 FPVK 1135
>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
Length = 1217
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 934 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKKRLLRKCE 979
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ F Y D +L D R + +D D
Sbjct: 980 NKLFPNTIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTSSYHVDFD 1039
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
+ +D+ G+I SD +E++ + + N PN +H+G++
Sbjct: 1040 SMAGADKFGNIYFARLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVN 1099
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I P G+C II T++GS+ +P +S ++ + ++
Sbjct: 1100 SLQKASLI---PGG---GEC----------IIYGTVMGSVGALLPFTSRDDVDFFSHLEM 1143
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
L HP PL G DH +RS PV+
Sbjct: 1144 HLRQDHP---PLCGRDHMSYRSAYFPVK 1168
>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 1218
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 67/270 (24%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + TT A+CPY R L G + +R + +G+ + +
Sbjct: 938 LELVHKTTVDEAPAAVCPYHGR-LLVGVG-------------RMLRLYDLGKKKLLRKCE 983
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A R+ V D ++ + Y +L D R + ++D D
Sbjct: 984 NKYIPNQIVSICATGQRVFVSDVQESVYMVRYKRQENQLIIFADDTHPRWITCTTILDYD 1043
Query: 286 TAVVSDRKGSIAVLSCSDRLEDN-------------------ASPECNLTPNCAYHMGEI 326
T +D+ G+IA++ S + D+ AS + ++ N +H+GE
Sbjct: 1044 TVATADKFGNIAIIRLSSIITDDVDEDPTGNKALWDRGLLNGASQKADVLAN--FHVGET 1101
Query: 327 AVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAV 385
+S++K + I +++ ++L G++ + +P +S E+++ + +
Sbjct: 1102 CMSLQKATLI----------------PGGSESLVYTSLSGTVGVLVPFTSREDHDFFQHL 1145
Query: 386 QARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ + + HP PL G DH FRS PV+
Sbjct: 1146 EMHMRSEHP---PLCGRDHLSFRSYYYPVK 1172
>gi|255590114|ref|XP_002535175.1| hypothetical protein RCOM_2050800 [Ricinus communis]
gi|223523827|gb|EEF27208.1| hypothetical protein RCOM_2050800 [Ricinus communis]
Length = 94
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 387 ARLAIHPLTAPLLGNDHSEFRSRENPV 413
ARL +HPLTAP+LGNDHSEFRSRENPV
Sbjct: 4 ARLVVHPLTAPILGNDHSEFRSRENPV 30
>gi|193785523|dbj|BAG50889.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 46/196 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 285 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 340
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 341 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 396
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 397 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 441
Query: 399 LGNDHSEFRSRENPVR 414
G DH FRS PV+
Sbjct: 442 CGRDHLSFRSYYFPVK 457
>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
Length = 1133
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 915 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 970
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 971 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1026
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1027 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1071
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1072 CGRDHLSFRSYYFPVKN 1088
>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
Length = 1253
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1035 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1090
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1091 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1146
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1147 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1191
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1192 CGRDHLSFRSYYFPVKN 1208
>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
Length = 1271
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1053 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1108
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1109 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1164
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1165 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1209
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1210 CGRDHLSFRSYYFPVKN 1226
>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
Length = 645
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ + A +R+ V D ++ I Y +L D R + L+D DT +D+
Sbjct: 418 IVNIQAMGSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADK 477
Query: 293 KGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSF 335
G+IA+L S SD ++++ + L C +H+GE +S++K +
Sbjct: 478 FGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMSLQKATL 537
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPL 394
I ++I +T+ G++ +P +S E+Y+ + ++ + +
Sbjct: 538 I----------------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLE--MHMRNE 579
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 580 NTPLCGRDHLSYRSYYYPVK 599
>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
[Cavia porcellus]
Length = 1215
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 997 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1052
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1053 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1109 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1153
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1154 CGRDHLSFRSYYFPVKN 1170
>gi|26351753|dbj|BAC39513.1| unnamed protein product [Mus musculus]
Length = 463
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 46/196 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 245 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 300
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 301 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 356
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 357 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 401
Query: 399 LGNDHSEFRSRENPVR 414
G DH FRS PV+
Sbjct: 402 CGRDHLSFRSYYFPVK 417
>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
Length = 1122
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 904 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 959
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 960 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1015
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1016 ------------PGGSESLVYTTLSGGIGILVPFTSYEDHDFFQHVEMHLRSEHP---PL 1060
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1061 CGRDHLSFRSYYFPVKN 1077
>gi|285999|dbj|BAA02805.1| KIAA0017 [Homo sapiens]
Length = 399
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 181 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 236
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 237 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 292
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 293 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 337
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 338 CGRDHLSFRSYYFPVKN 354
>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
Length = 635
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 417 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 472
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 473 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 528
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 529 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 573
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 574 CGRDHLSFRSYYFPVKN 590
>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 679 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 734
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 735 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 790
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 791 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 835
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 836 CGRDHLSFRSYYFPVKN 852
>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
Length = 1217
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
Length = 1217
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|28175094|gb|AAH31197.2| Sf3b3 protein, partial [Mus musculus]
Length = 494
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 46/196 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 276 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 331
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 332 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 387
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 388 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 432
Query: 399 LGNDHSEFRSRENPVR 414
G DH FRS PV+
Sbjct: 433 CGRDHLSFRSYYFPVK 448
>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
Length = 1217
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
jacchus]
gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
boliviensis]
gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=STAF130; AltName:
Full=Spliceosome-associated protein 130; Short=SAP 130
gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
Length = 650
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 432 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 487
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 488 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 543
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 544 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 588
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 589 CGRDHLSFRSYYFPVKN 605
>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis domestica]
Length = 1202
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 984 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1039
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1040 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1095
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1096 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1140
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1141 CGRDHLSFRSYYFPVKN 1157
>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
Length = 1217
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
Length = 1217
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
Length = 1217
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
Length = 908
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 690 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 745
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 746 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 801
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 802 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 846
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 847 CGRDHLSFRSYYFPVKN 863
>gi|12653387|gb|AAH00463.1| SF3B3 protein [Homo sapiens]
gi|13111947|gb|AAH03146.1| SF3B3 protein [Homo sapiens]
Length = 399
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 181 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 236
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 237 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 292
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 293 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 337
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 338 CGRDHLSFRSYYFPVKN 354
>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
familiaris]
gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda melanoleuca]
gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
rotundus]
gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
Length = 1217
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
Length = 1217
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALRDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y ++A KL D QR ++D ++ D
Sbjct: 988 VIVSLQTQGSRIVVGDSQHGLIYVAYKQEANKLIAFADDSIQRWTTCSTMVDYESTAGGD 1047
Query: 292 RKGSIAVLSCSDRLE---DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G+I +L C ++ D E +L Y G S R + D A C
Sbjct: 1048 KFGNIWILRCPEKASQEADQPGSEVHLMHARDYLHG---TSNRLALMAHVYTQDIATSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ + G+I + IP +S E+ + + ++ + PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGIQGTIGVLIPFVSREDADFFQTLEQHMRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVR 414
RS PV+
Sbjct: 1163 RSYYVPVK 1170
>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
Length = 1217
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
Length = 1217
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
mulatta]
gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
mulatta]
Length = 1199
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 981 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1036
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1037 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1092
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1093 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1137
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1138 CGRDHLSFRSYYFPVKN 1154
>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 1240
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1022 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1077
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1078 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1133
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1134 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1178
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1179 CGRDHLSFRSYYFPVKN 1195
>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
Length = 1215
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ + A +R+ V D ++ I Y +L D R + L+D DT +D+
Sbjct: 988 IVNIQAMGSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADK 1047
Query: 293 KGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSF 335
G+IA+L S SD ++++ + L C +H+GE +S++K +
Sbjct: 1048 FGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMSLQKATL 1107
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPL 394
I ++I +T+ G++ +P +S E+Y+ + ++ + +
Sbjct: 1108 I----------------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLE--MHMRNE 1149
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1150 NTPLCGRDHLSYRSYYYPVK 1169
>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
Length = 1216
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 129/308 (41%), Gaps = 76/308 (24%)
Query: 142 IVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYST---TWPGMVLAICPYLDR 198
+VG A + L S CS + S K+ T +L L + T +PG + A +
Sbjct: 906 VVGVAKDALLSPRSCS---EGSLHVYKI--YNTGKLELVHKTPIDEYPGALAA----FNG 956
Query: 199 YFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF-----------TRIAVGD 247
LA G + +R + +GR + + H RI V D
Sbjct: 957 KLLAGVG-------------RMLRLYDIGRRKLLRKCENRHIPNLIADIKTIRQRIFVSD 1003
Query: 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL----SCSD 303
++ + Y + +L D + R + + ++D DT ++D+ G++AVL S SD
Sbjct: 1004 VQESVFCVKYKKRENQLIIFADDTNPRWITNTCILDYDTVAMADKFGNVAVLRLPQSVSD 1063
Query: 304 RLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
++++ AS + ++T N +H+GE S+++ + I
Sbjct: 1064 DVDEDPTGNKALWDRGLLNGASQKGDITVN--FHVGETVTSLQRATLI------------ 1109
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
++ +T+ G++ +F+P +S E+++ + ++ + + +PL G DH FR
Sbjct: 1110 ----PGGSEALLYATVSGALGVFLPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLSFR 1163
Query: 408 SRENPVRK 415
S PV+
Sbjct: 1164 SYYYPVKN 1171
>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
Length = 1212
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 10/201 (4%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ +I+ L+ +RI VGD + GI + Y KL D R V
Sbjct: 971 QMLRKAQADVAPQLIVSLSTQGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTISRWVTC 1030
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGS 334
++D ++ V D+ G+I ++ C ++ A E L H +S+ S
Sbjct: 1031 TTMVDYESVVGGDKFGNIFLVRCPEKASQEADEESGGLHLLNTRDYLHGTPHRLSLLGHS 1090
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ +P + Q ++ S + G+I +FIP ++ E+ + + ++ +
Sbjct: 1091 YTQDVPTSITKTSLVVG---GQDVLLWSGINGTIGVFIPFVTREDVDFFQNLEQHMRTE- 1146
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
APL G DH +RS PV+
Sbjct: 1147 -DAPLAGRDHLMYRSYYVPVK 1166
>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
Length = 1221
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 23/249 (9%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRV---RRFAVGRTRFM 232
+L + + T + L + P+ R LA G A + R + FA
Sbjct: 939 ELEVLHKTEVDDIPLVLRPFQGR-LLAGIGKALRIYDLGKKKLLRKCENKSFATA----- 992
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L A +RI VGD ++ I+F SY +L D + V C ++D DT +D+
Sbjct: 993 IVSLDAQGSRIVVGDMQESIIFTSYKPLENRLVTFADDVMPKFVTRCAMLDYDTVAAADK 1052
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G++ VL R++ + S + P + E V + + L A +GD + S
Sbjct: 1053 FGNVYVL----RIDADTSRSVDEDPTGMTIVHEKPV-LMGAAHKATLVAHFFVGDIVTSL 1107
Query: 353 ESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ + ++ + + G+I +P +S E+ + L +++ L + L+G DH
Sbjct: 1108 NRTVMVPGGREVLLYTGVSGTIGALVPFVSKEDVDTLSTLESHLRQE--NSSLVGRDHLA 1165
Query: 406 FRSRENPVR 414
+RS PV+
Sbjct: 1166 YRSSYAPVK 1174
>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
Length = 1218
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 45/260 (17%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L L + TT + AIC + R + G + + + +R+ + +IM +
Sbjct: 938 LELVHKTTVDNVPTAICGFQGRVII---GIGRILRLYDIGKKKLLRKCENKQIPLLIMGI 994
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGS 295
RI V D ++ + Y + +L I+ D +Q R + ++D +T +D+ G+
Sbjct: 995 RVMGCRIYVSDVQESVYMVRYKRNENQL-IIFADDTQPRYITAMEILDYNTVATADKCGN 1053
Query: 296 IAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKGSFI 336
I+V+ S SD ++D+ AS + + N +H+GEI SI+K + I
Sbjct: 1054 ISVVRLASSISDEVDDDPTGNKSLWDRGLLNGASQKADFIVN--FHIGEICTSIQKATLI 1111
Query: 337 YKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLT 395
+++ +T+ G+I + +P ++ EE + + ++ + +
Sbjct: 1112 ----------------PGGSESLVYATVTGTIGVLVPFTAHEEQDFFQHLE--MHMRSEN 1153
Query: 396 APLLGNDHSEFRSRENPVRK 415
PL G DH +RS PV+
Sbjct: 1154 PPLCGRDHLSYRSYYFPVKN 1173
>gi|328771718|gb|EGF81757.1| hypothetical protein BATDEDRAFT_34564 [Batrachochytrium dendrobatidis
JAM81]
Length = 1248
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 75/296 (25%)
Query: 184 TWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRT---------RFMIM 234
T G VLA+C +++ Y LASAG+ Y +++ AV RT +I
Sbjct: 901 TLNGPVLALCTFVNSYLLASAGSTLY----------QLKIEAVHRTITAGASIDINSIIT 950
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
+ A T+I + + +D I Y + + I D + R+ ++C +D + +DR G
Sbjct: 951 RIHALKTQIFIANTQDSISVYKFDIATKAFAFIKSDVTSRVGSECFPLDDSLVIGTDRHG 1010
Query: 295 SIAVLSCSDRLEDNASPEC----NLTPNCAYHMGEIAVSIRKGSFIYKLP---------- 340
+I L +++ ED+ + E ++ +H+ +I + ++ GS ++L
Sbjct: 1011 NIYGLD-TNQGEDSDTHESTDSQSMQTGFEFHILDIVLQLKPGSMKHRLQQITSATAAEH 1069
Query: 341 ---ADDALGDCLASFE---------------------------SSQTTIIASTLLGSIVI 370
DD + L + + S +I + G VI
Sbjct: 1070 TSFTDDRMISELDTLDKGWWSNNGTALSKPMQKLYHVSTAENVSISNEVIEQRVHGGQVI 1129
Query: 371 F-----------IPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
+ + + S+ Y LE +Q LA T PLLGND FRS ++K
Sbjct: 1130 YGATLSGGLIAMLRLRSDVYIALEILQNVLAEFEQTRPLLGNDFKTFRSGSGELKK 1185
>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
Length = 1221
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 17/246 (6%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L + + T + L + P+ R LA G A + + +R+ I+
Sbjct: 939 ELEVHHKTEIDDIPLVLRPFQGR-LLAGVGKALRIYDL--GKKKLLRKCENKSFPTAIVS 995
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L A +RI VGD ++ I+F SY +L D + V C ++D DT +D+ G+
Sbjct: 996 LDAQGSRIVVGDMQESIVFTSYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGN 1055
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
+ VL R++ + S + P + E V + + L A +GD + S +
Sbjct: 1056 LYVL----RIDADTSRSVDEDPTGMTIVHEKPV-LMGAAHKATLLAHYFVGDIITSLNRT 1110
Query: 356 ------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
+ ++ + + G+I +P +S E+ + L +Q +L L+G DH +RS
Sbjct: 1111 VMVPGGREVLMYTGISGTIGALVPFVSKEDVDTLSTLQTQLRQE--NNSLVGRDHLAYRS 1168
Query: 409 RENPVR 414
PV+
Sbjct: 1169 SYAPVK 1174
>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
Length = 1208
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 36/214 (16%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ I+ L +RI VGD + G+ + Y + KL D R
Sbjct: 971 QMLRKSQAEVATQQIVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTC 1030
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAY 321
++D ++ D+ G++ ++ C ++ + A E + TP+ C +
Sbjct: 1031 TTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRVSLMCHF 1090
Query: 322 HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYE 380
+ +I SI K S + Q ++ S ++G+I +FIP +S E+ +
Sbjct: 1091 YTQDIPTSITKASLVV----------------GGQEVLLWSGIMGTIGVFIPFVSREDAD 1134
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ ++ L PL G DH +R PV+
Sbjct: 1135 FFQNLEQHLRTE--DPPLAGRDHLMYRGYYAPVK 1166
>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
Length = 1286
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 39/259 (15%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM- 232
++L L + T CP+ R LAS GN ++R +A+G+ + +
Sbjct: 1004 NYKLNLLHITPVEDQPFCFCPFNGR-LLASIGN-------------KLRIYALGKKKLLK 1049
Query: 233 ----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
I+ + RI D R+ +L + Y + L I D R + ++
Sbjct: 1050 KCEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDSNMNTLRLISDDIIPRWITCSEIL 1109
Query: 283 DVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
D T + +D+ S+ VL R+ + A E N ++ GEI K + + +
Sbjct: 1110 DHHTIMAADKFDSVFVL----RVPEEAKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSF 1165
Query: 343 DALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLT 395
+G+ + S + +S II ST++G+I FIP + EE EL + ++ + +
Sbjct: 1166 H-VGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTEN 1222
Query: 396 APLLGNDHSEFRSRENPVR 414
PL G +H FRS +PV+
Sbjct: 1223 PPLCGREHIFFRSYYHPVQ 1241
>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
Length = 1019
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 65/271 (23%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM--- 232
QL L ++T A+CP+ R LA G +R + +GR + +
Sbjct: 738 QLELVHATPVEEAPTALCPFQGR-LLAGVGKC-------------LRLYDLGRKKLLRKC 783
Query: 233 --------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
I+ + A R+ V D ++ F Y +L D R + ++D
Sbjct: 784 ENKYIPNAIVSIQAMGNRVVVSDVQESFFFLRYKRQENQLVIFADDSVPRWITASCMLDY 843
Query: 285 DTAVVSDRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGE 325
+T +D+ G+++++ S SD ++++ +S + ++ N +H+GE
Sbjct: 844 ETVAGADKFGNVSIIRLPSSISDDVDEDPTGIKSLWDRGWLGGSSQKADVISN--FHIGE 901
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEA 384
+S++K + I +++ TL G++ + +P ++ E+++ +
Sbjct: 902 TVLSLQKATLI----------------PGGSESLVYVTLSGTVGVLVPFTAHEDHDFFQH 945
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
++ + PL G DH FRS PV+
Sbjct: 946 LEMHMRYE--NPPLCGRDHLSFRSSYFPVKN 974
>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
Length = 1212
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ + Y + KL D R ++D ++ D+
Sbjct: 985 IVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSF 335
G++ ++ C ++ + A E + TP+ C ++ +I SI K S
Sbjct: 1045 FGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRVSLMCHFYTQDIPTSITKASL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + + ++ L
Sbjct: 1105 VV----------------GGQEVLLWSGIMGTIGVFIPFVSREDADFFQNLEQHLRTE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G DH +R PV+
Sbjct: 1147 DPPLAGRDHLMYRGYYAPVK 1166
>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1212
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 10/201 (4%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ T +I+ L+ +RI VGD + GI + Y KL D R V
Sbjct: 971 QMLRKAQADVTPQLIVSLSTQGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTVSRWVTC 1030
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGS 334
++D ++ D+ G++ ++ CS++ A E + H +S+ S
Sbjct: 1031 TTMVDYESVAGGDKFGNMFLVRCSEKATQEADDESGGLHLINTRDYLHGTPHRLSLLAHS 1090
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ +P + Q ++ S + G+I +FIP ++ E+ + + ++ +
Sbjct: 1091 YTQDVPTSITKTSLVVG---GQDVLLWSGINGTIGVFIPFVTREDVDFFQNLEQHMRTE- 1146
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
APL G DH +R PV+
Sbjct: 1147 -DAPLAGRDHLMYRGYYVPVK 1166
>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1211
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 190 LAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR-FMIMLLTAHFTRIAVGDC 248
+A+ P+ R LA G V +++ R A G +I+ L +RI VGD
Sbjct: 944 MALIPFQGR-LLAGIGKTLRVYDL---GLRQLLRKAQGEVAPQLIVSLQTQGSRIIVGDV 999
Query: 249 RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRL--- 305
+ GI + Y ++ KL D R ++D ++ D+ G+I +L CS+R
Sbjct: 1000 QQGITYVVYKPESNKLLPFADDTINRWTTCTTMVDYESVAGGDKFGNIWILRCSERASQE 1059
Query: 306 EDNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTL 364
D E L Y H + +S + LP + + Q ++ S +
Sbjct: 1060 SDEPGSEIQLLHARNYLHGAQSRLSAMAHFYTQDLPTSIVKTNLVV---GGQDVLVWSGI 1116
Query: 365 LGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
G++ + IP +S E+ + + +++ + PL G DH +R PV+
Sbjct: 1117 QGTVGVLIPFVSREDVDFFQNLESHMRAE--DPPLAGRDHLIYRGYYVPVK 1165
>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
Length = 1230
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 39/259 (15%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM- 232
++L L + T CP+ R LAS GN ++R +A+G+ + +
Sbjct: 948 NYKLNLLHITPVEDQPFCFCPFNGR-LLASIGN-------------KLRIYALGKKKLLK 993
Query: 233 ----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
I+ + RI D R+ +L + Y + L I D R + ++
Sbjct: 994 KCEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDANMNTLRLISDDIIPRWITCSEIL 1053
Query: 283 DVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
D T + +D+ S+ VL R+ + A E N ++ GEI K + + +
Sbjct: 1054 DHHTIMAADKFDSVFVL----RVPEEAKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSF 1109
Query: 343 DALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLT 395
+G+ + S + +S II ST++G+I FIP + EE EL + ++ L
Sbjct: 1110 H-VGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTE--N 1166
Query: 396 APLLGNDHSEFRSRENPVR 414
PL G +H FRS +PV+
Sbjct: 1167 PPLCGREHIFFRSYYHPVQ 1185
>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
Length = 1215
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 36/201 (17%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ + A +R+ V D ++ I Y +L D R + L+D DT +D+
Sbjct: 988 IVNIQAMGSRVFVSDVQESIYCVKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADK 1047
Query: 293 KGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSF 335
G+++VL S SD ++++ + L C +H+GE +S++K +
Sbjct: 1048 FGNVSVLRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENVCTFHLGETIMSLQKATL 1107
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPL 394
I ++I +T+ G++ +P +S E+++ + ++ + +
Sbjct: 1108 I----------------PGGSESLIYATMSGTVGALVPFTSREDFDFFQHLE--MHMRNE 1149
Query: 395 TAPLLGNDHSEFRSRENPVRK 415
PL G DH FRS PV+
Sbjct: 1150 NPPLCGRDHLSFRSYYYPVKN 1170
>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
Length = 1194
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ + F++Y L D + R V CV++D DT ++D+ G+IAV+
Sbjct: 973 RIVVSDVQESVHFFTYRRSENVLVLFADDTAPRFVTSCVMLDFDTVAIADKFGTIAVVRM 1032
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS------ 355
+ + E L ++A++ +L A +G+ + +
Sbjct: 1033 PPSSDTDIDIENELDIGTLTTKSKLALNGAANKL--ELVASFYVGETCCNLTRTSLMVGG 1090
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
II +TL G+I IP SS E E+ Q + + L G DH +RS PV+
Sbjct: 1091 SEVIIYTTLGGAIGALIPFSSRE-EVDFFAQLEMQMRQEKESLCGRDHLSYRSYYFPVKN 1149
>gi|449017314|dbj|BAM80716.1| similar to splicing factor 3b subunit 3 [Cyanidioschyzon merolae
strain 10D]
Length = 1678
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 39/245 (15%)
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGN--AFYV---CGFPNDNPQRVRRFAVGRT 229
W+L L ++P + + + R+ + + GN A Y CG+ P V + A+
Sbjct: 1333 WKLVLTERLSFPESIGDLS-RVGRHLVVAHGNRLALYTHTRCGW---RPLTVSKRALASP 1388
Query: 230 RFMIMLLTAH--FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTA 287
I+ LTAH RI V GI + Y+ +L + D +R + L+D DT
Sbjct: 1389 ---IVALTAHEALCRIFVASLHHGISLFKYYVQENRLVLVAEDMQRRWIHRLQLLDADTV 1445
Query: 288 VVSDRKGSIAVLSCS-------------DRLED--NASPE------CNLTPNCAYHMGEI 326
V +D+ GSIAVL RL + ASPE L P C+ H+G +
Sbjct: 1446 VAADKFGSIAVLRLPVESSAAIEGDPSYGRLAERYGASPESARSFVARLMPECSVHVGSV 1505
Query: 327 AVSIRKGSFIYKLPAD-DALGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEA 384
S+ F Y D DA + I+ T+ G + IP + E+++++
Sbjct: 1506 VTSLHV--FGYGAATDPDATPASAPRSWTEAEAILYGTVSGGFGMLIPFRTRAEWDIVQR 1563
Query: 385 VQARL 389
++ L
Sbjct: 1564 LEREL 1568
>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
Length = 1199
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 18/272 (6%)
Query: 151 SSSSLCSSPDDASCDGIKLEE-TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFY 209
S+ SL SP D+ I L T+ + L + T G+ A+C + R L GN
Sbjct: 893 SAVSLTFSPRDSEGGFIHLYRYTQDGGIELFHKTPLDGVPGAMCGFKGR-LLVGVGNTLR 951
Query: 210 VCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+ F + +R+ I + A RI VGD ++ + Y + + +
Sbjct: 952 LYDF--GKKKLLRKVENRNFPNFIKTIHAQGERIYVGDVQESFHYVRYKREDGSMYIVAD 1009
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP---NCAYHMGEI 326
D R V +D DT DR G++ V RL + S E P AY G +
Sbjct: 1010 DVQPRHVTAACPLDYDTIAGGDRFGNVFV----SRLAQDVSDEIEEDPTGGKTAYGQGAL 1065
Query: 327 AVSIRKGSFIYKLPADDALGDCLASFESSQT----TIIASTLLGSIVIFIPISSEEYELL 382
+ K + + + + + C + + Q ++I +TL+G++ +P + E ++
Sbjct: 1066 NGASHKINQVTQFHVGETV--CALTKGTLQAGGLESMIYATLMGTLGALMPFGNRE-DVD 1122
Query: 383 EAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ + PLLG DH FRS PV+
Sbjct: 1123 FCTHLEMHMRQELPPLLGRDHLAFRSSYFPVK 1154
>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
occidentalis]
Length = 1223
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 49/262 (18%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L ++T + A+C + +R L G + F + +R+ +I+
Sbjct: 942 ELELVHTTVMDDVPQAMCNFGNR-VLIGVGRCLRIYDF--GKKKMLRKCENKHIPNLIVT 998
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+ A RI VGD ++ F Y +L D + R ++D T V D+ G+
Sbjct: 999 INAVGNRIVVGDVQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGN 1058
Query: 296 IAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGS 334
+ +L RL N S + + P H+GE+ VS++K +
Sbjct: 1059 VYIL----RLPGNTSDDVDEDPTGVRSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTA 1114
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-H 392
I P I+ +T+ G + IP SS +++E + ++ + H
Sbjct: 1115 LIPGGPE----------------AIVYTTIAGGVGALIPFSSKDDHEFFQHLEMYMRTEH 1158
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
P P+ G DH FRS PV+
Sbjct: 1159 P---PICGRDHLSFRSYYFPVK 1177
>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
occidentalis]
Length = 1211
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 49/262 (18%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L ++T + A+C + +R L G + F + +R+ +I+
Sbjct: 930 ELELVHTTVMDDVPQAMCNFGNR-VLIGVGRCLRIYDF--GKKKMLRKCENKHIPNLIVT 986
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+ A RI VGD ++ F Y +L D + R ++D T V D+ G+
Sbjct: 987 INAVGNRIVVGDVQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGN 1046
Query: 296 IAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGS 334
+ +L RL N S + + P H+GE+ VS++K +
Sbjct: 1047 VYIL----RLPGNTSDDVDEDPTGVRSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTA 1102
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-H 392
I P I+ +T+ G + IP SS +++E + ++ + H
Sbjct: 1103 LIPGGPE----------------AIVYTTIAGGVGALIPFSSKDDHEFFQHLEMYMRTEH 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
P P+ G DH FRS PV+
Sbjct: 1147 P---PICGRDHLSFRSYYFPVK 1165
>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
Length = 1317
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR-LVADCVLMDVDTAVVSDRKGSIAVLS 300
RI GD +G+L + ++ + + + DP R L + C ++D T VSD+ +I V
Sbjct: 1099 RIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSR 1158
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT-- 358
D+ S + T N + + + + A LGD + + SQ T
Sbjct: 1159 VPAEASDDFSFVTSFTDNNNSQSSALMRTHQINTV-----AQFHLGDIVTCLQKSQLTPT 1213
Query: 359 ----IIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
II T+LGSI PI ++E+ ELL ++ L T LL DH FRS +PV
Sbjct: 1214 SAEAIIYGTVLGSIGSLSPILNNEDIELLSKLEILLRKQKST--LLSRDHLMFRSYYSPV 1271
Query: 414 RK 415
Sbjct: 1272 HN 1273
>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
Length = 1203
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 29/205 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q V+R + + I+ L R+ V D RD + + Y D QR V
Sbjct: 969 QLVKRSSTRLECYEIVDLKTQGFRVIVSDVRDSVRYTVYKPLENSFVDFIDDTMQRHVTR 1028
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRL-----EDNAS-----PECNLTPNCAYHMGEIAV 328
+L+D DT VV D+ G+I+VL C +++ EDN L Y++G++
Sbjct: 1029 TLLLDYDTVVVGDKFGNISVLRCPEQISEMSDEDNHGFLVKMRRTKLDNPVNYYVGDMPT 1088
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
+KGS + ES II L G + P+ S E + +Q
Sbjct: 1089 FFQKGSL------------TIGGAES----IIYGCLQGQMGCLYPMKSLSEINFFKELQ- 1131
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENP 412
RL IH T+ L ++ +F+ NP
Sbjct: 1132 RLIIHEFTS-LTDREYLKFKGYYNP 1155
>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
CIRAD86]
Length = 1223
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 23/249 (9%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNP-QRVRRFAVGRTRFMIM 234
+L + T + V A+ P+ R L GN ++ ++ R AV I+
Sbjct: 942 ELEFVHKTKFELPVYALMPFRGRLALG-VGNELFIYDMGMKALLRKARNIAVPN---QIV 997
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
L + RI GD +G+ + Y +L D QR ++D +TA D+ G
Sbjct: 998 SLESQGNRIICGDVSEGVTYLVYKPTFNRLIPFVDDTVQRWTTTTTMVDYETAAGGDKFG 1057
Query: 295 SIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA--------VSIRKGSFIYKLPADDALG 346
++ ++ C ++ S E + Y M E + + +R F +P
Sbjct: 1058 NLWIVRCPEQ----PSQEADEEGAGGYIMNERSYLNGAPYRLDLRAHYFCQDIPMSMQRT 1113
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+A Q + S L G++ I IP ++ E+ E A++ ++ PL G DH
Sbjct: 1114 ALVA---GGQEVLFWSGLQGTLGILIPFVTREDVEFFTALEQQMRTE--DPPLAGRDHLM 1168
Query: 406 FRSRENPVR 414
+RS PV+
Sbjct: 1169 YRSYYVPVK 1177
>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
Length = 1221
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 42/259 (16%)
Query: 176 QLRLAYSTTWPGMVL-AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
+L L + T G V A+C + R LA G + + + +R+ R IM
Sbjct: 940 RLELVHKTIVDGGVPGALCGFKGR-LLAGVGPTLRL--YDMGKKKLLRKCEYNRLPHQIM 996
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
+T RI VGD ++ + Y + D + R + + +D DT D+ G
Sbjct: 997 NITVQGPRIYVGDAQESVHMMRYKKADNAFYIFADDIAPRYLTTILPLDYDTLAAGDKFG 1056
Query: 295 SIAVL----SCSDRLEDN--------ASPECNLTPN-----CAYHMGEIAVSIRKGSFIY 337
+ VL S ++ED+ AS N P+ +H+G+ S+++
Sbjct: 1057 NFVVLRLPREASQQVEDDPTGGKMAAASGRLNGAPHKLEEVVKFHVGDTITSLQRAEMQ- 1115
Query: 338 KLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLT 395
Q ++ ST++G+I + P ++ E+ + ++ L HP
Sbjct: 1116 ---------------AGGQEVLLYSTVMGAIGVLYPFTNREDVDFFGHLEMHLRQEHP-- 1158
Query: 396 APLLGNDHSEFRSRENPVR 414
PL G DH FRS PVR
Sbjct: 1159 -PLCGRDHLSFRSAYFPVR 1176
>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
Length = 1318
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR-LVADCVLMDVDTAVVSDRKGSIAVLS 300
RI GD +G+L + ++ + + + DP R L + C ++D T VSD+ +I V
Sbjct: 1100 RIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSR 1159
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT-- 358
D+ S + T N + + + + A LGD + + SQ T
Sbjct: 1160 VPVEASDDFSFVTSFTDNNNSQSSALMRTHQINTV-----AQFHLGDIVTCLQKSQLTPT 1214
Query: 359 ----IIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
II T+LGSI PI ++E+ ELL ++ L T LL DH FRS +PV
Sbjct: 1215 SAEAIIYGTVLGSIGSLSPILNNEDIELLSKLEILLRKQKST--LLSRDHLMFRSYYSPV 1272
Query: 414 RK 415
Sbjct: 1273 HN 1274
>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
Length = 1213
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 21/289 (7%)
Query: 133 SQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAI 192
S R +VG A + S C S K E T L L + T + +A+
Sbjct: 892 SARNGELHLVVGTAKDTTVSPRTCES---GFLRTYKFTENGTG-LELLHKTETDDVPMAL 947
Query: 193 CPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGI 252
+ R A G A + + +R+ I+ LT +RI VGD ++ +
Sbjct: 948 LAFQGR-LAAGVGKALRIYDI--GKKKLLRKVENKSFTTAIVTLTTQGSRILVGDMQESV 1004
Query: 253 LFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE 312
+ Y + +L D R V ++D +T V DR G+I V +RL+ S +
Sbjct: 1005 QYVVYKQPENRLLTFADDTQPRWVTAITMVDYNTIVAGDRFGNIFV----NRLDSKVSDQ 1060
Query: 313 CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLLG 366
+ P A + E + + K+ A +GD + S + I+ + L G
Sbjct: 1061 VDEDPTGAGILHEKPI-LMGAPHKTKMIAHFHVGDIITSLHKVSLVAGGREVIVYTGLHG 1119
Query: 367 SIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+I I +P IS E+ + + ++ + L+G D +R PV+
Sbjct: 1120 TIGILMPFISKEDVDFISTLEQHMRTE--QPSLVGRDQLAYRGYYVPVK 1166
>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
tropicalis]
Length = 1217
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 46/197 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ + D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVILSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTSCLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLP 340
RL N + + + P YH+GE +S++K + I
Sbjct: 1055 IVRLPSNTNDDVDEDPTGNKALWDRGLLNGASQKAEVIVNYHVGETVLSVQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP P+
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PI 1155
Query: 399 LGNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1156 CGRDHLSFRSYYFPVKN 1172
>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
Length = 1189
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ + Y + KL D R ++D ++ D+
Sbjct: 972 IVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDK 1031
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG----EIAVSIRKGSFIYKLPADDAL 345
G++ ++ C ++ + A E +L Y G +I SI K S +
Sbjct: 1032 FGNMFIVRCPEKASEEADEEQTGLHLINAREYLHGTPHRDIPTSITKTSLVV-------- 1083
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
Q ++ S ++G+I +FIP IS E+ + + ++ L PL G DH
Sbjct: 1084 --------GGQEILLWSGIMGTIGVFIPFISREDADFFQNLEQHLRTE--DPPLAGRDHL 1133
Query: 405 EFRSRENPVR 414
+R PV+
Sbjct: 1134 MYRGYYAPVK 1143
>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis niloticus]
Length = 1217
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 44/196 (22%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ + + Y + +L D R V L+D DT +D+ G+I+++
Sbjct: 999 RVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMAAADKFGNISIV-- 1056
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N S + + P N A YH+GE +S++K + I
Sbjct: 1057 --RLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
+++ +TL G I I +P +S E+++ + ++ + + PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLC 1156
Query: 400 GNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1157 GRDHLSFRSYYFPVKN 1172
>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
strain H]
Length = 1276
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 30/260 (11%)
Query: 174 TWQLRL-AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
T LR+ Y + +L I P D+ F S N + N ++R +A+G+ + +
Sbjct: 983 TAALRVYTYDINYKLNLLHITPVEDQPFCFSPFNGRLLASVGN----KLRIYALGKKKLL 1038
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + RI D R+ +L + Y + L I D R + +
Sbjct: 1039 KKCEYKDIPEAIISIKVSGDRIFASDIRESVLVFFYDANMNALRLISDDIIPRWITCSEI 1098
Query: 282 MDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
+D T + +D+ S+ VL R+ + A E N ++ GE+ K + +
Sbjct: 1099 LDHHTIMAADKFDSVFVL----RVPEEAKQEEYGISNKCWYGGEMMAGSNKNRRLEHI-M 1153
Query: 342 DDALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPL 394
+ +G+ + S + +S II ST++G+I FIP + EE EL + ++ + +
Sbjct: 1154 NFHVGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTE 1211
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G +H FRS +PV+
Sbjct: 1212 NPPLCGREHIFFRSYYHPVQ 1231
>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
Length = 1241
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 33/249 (13%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L + + TT V A+ + R LASAG + + + +R+ +I
Sbjct: 970 RLEMMHRTTVDEAVTALASFRGR-LLASAGKMLRI--YDLGKKKLLRKCENKHMPNLITH 1026
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVV---SD- 291
+ RI VGD ++ + FY Y +L D QR + ++D DT + SD
Sbjct: 1027 ILTMGHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILDYDTVALRLPSDC 1086
Query: 292 ----RKGSIAVLSCSDR-LEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
++ + + D+ + + AS +C + +++GE ++K I
Sbjct: 1087 TDDVQEDPTGIRALWDKGILNGASQKCEMV--ATFYVGECVTCLQKAMLI---------- 1134
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSE 405
S +++ ST+ G I +P SS E+YE + ++ L PL G DH
Sbjct: 1135 ------PGSSESLVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLRTE--YPPLCGRDHLA 1186
Query: 406 FRSRENPVR 414
+RS PV+
Sbjct: 1187 YRSFYAPVK 1195
>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 914
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 34/201 (16%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y KL D R C ++D +T D
Sbjct: 684 LIVGLQTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGD 743
Query: 292 RKGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGS 334
+ G++ +L C ++ + A + N TPN Y G+I SI+K +
Sbjct: 744 KFGNLWMLRCPQKVSEEADEDNSGVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTN 803
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ + + + G++ I +P +S E+ + ++++ +LA
Sbjct: 804 LV----------------AGGRDVVFWTGFQGTLGILVPFVSREDVDFFQSLEMQLASSN 847
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
PLLG DH +RS P +
Sbjct: 848 GNPPLLGRDHLIYRSYYAPSK 868
>gi|5817204|emb|CAB53699.1| hypothetical protein [Homo sapiens]
Length = 215
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 46/192 (23%)
Query: 247 DCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLE 306
D ++ ++ Y + +L D R V L+D DT +D+ G+I V+ RL
Sbjct: 2 DVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVV----RLP 57
Query: 307 DNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLPADDAL 345
N + E + P YH+GE +S++K + I
Sbjct: 58 PNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI--------- 108
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDH 403
+++ +TL G I I +P +S E+++ + V+ L + HP PL G DH
Sbjct: 109 -------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PLCGRDH 158
Query: 404 SEFRSRENPVRK 415
FRS PV+
Sbjct: 159 LSFRSYYFPVKN 170
>gi|389609725|dbj|BAM18474.1| spliceosomal protein sap [Papilio xuthus]
Length = 367
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
RI V D ++ + Y + +L D + R + + ++D DT +SD+ G+++V+
Sbjct: 190 RIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNVSVMRL 249
Query: 300 --SCSDRLEDNASPECNLTP----NCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
S SD ++++ + L N A GEI V+ G + L +
Sbjct: 250 PHSVSDDVDEDPTGNKALWDRGLLNGASQKGEIVVNFHVGETVASLQRATLI-------P 302
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ +T+ G++ + +P +S E+++ + ++ + + +PL G DH FRS P
Sbjct: 303 GGSEALLYATISGALGVLLPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLSFRSYYYP 360
Query: 413 VRK 415
V+
Sbjct: 361 VKN 363
>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1214
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 109/268 (40%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+ + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALSQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ F Y D +L D R + +D D
Sbjct: 981 NKLFPNSIVSIQTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDCVPRWLTASHHVDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S+ K S I P G+C II T++GS+ +P +S ++ + ++
Sbjct: 1101 SLSKASLI---PGG---GEC----------IIYGTVMGSVGALLPFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
L HP PL G DH +RS PV+
Sbjct: 1145 HLRQDHP---PLCGRDHMAYRSAYFPVK 1169
>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
Length = 1210
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 34/201 (16%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y KL D R C ++D +T D
Sbjct: 980 LIVGLQTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGD 1039
Query: 292 RKGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGS 334
+ G++ +L C ++ + A + N TPN Y G+I SI+K +
Sbjct: 1040 KFGNLWMLRCPQKVSEEADEDNSGVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTN 1099
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ + + + G++ I +P +S E+ + ++++ +LA
Sbjct: 1100 LV----------------AGGRDVVFWTGFQGTLGILVPFVSREDVDFFQSLEMQLASSN 1143
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
PLLG DH +RS P +
Sbjct: 1144 GNPPLLGRDHLIYRSYYAPSK 1164
>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
Length = 1170
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 46/244 (18%)
Query: 195 YLDRYFLASAGN-AFYVCGFPNDNPQRVRRFAVGRTRFM--IMLLTAH-FTRIAVGDCRD 250
+ DR +AS + + Y G +++ R ++ R F+ I+ +T RI + D +
Sbjct: 903 FQDRLLVASGNSISLYELG-----QRQLLRKSLTRIDFIQTIVKVTPQPRDRILLADSAN 957
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNA- 309
I+F + ++ + + D +R + +D DT + D+ G+I V S DR E
Sbjct: 958 SIVFAKFDQEENQFVSMADDTVKRNITAWKQLDYDTVIGGDKFGNIFV-SRLDREESKQI 1016
Query: 310 -------------SPECN-----LTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
SP N L C Y++ +I S + GSF LG
Sbjct: 1017 DQNWTVLKQAAKNSPNLNSCVYKLQNLCEYYIPDIITSFQLGSF--------NLG----- 1063
Query: 352 FESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ II + L G+I I +P IS E ELL +Q ++ + + G +H++ RS
Sbjct: 1064 ---GEECIIYTGLTGTIGILLPLISKSEIELLHDLQLEISAYNDKVNVAGKNHAKLRSYY 1120
Query: 411 NPVR 414
NP +
Sbjct: 1121 NPAK 1124
>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
Length = 1217
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 44/196 (22%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ + + Y + +L D R V L+D DT +D+ G+I+++
Sbjct: 999 RVIVTDVQESLFWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTMASADKFGNISIV-- 1056
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N S + + P N A YH+GE +S++K + I
Sbjct: 1057 --RLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEVIMNYHIGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
+++ +TL G I I +P +S E+++ + ++ + + PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLC 1156
Query: 400 GNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1157 GRDHLSFRSYYFPVKN 1172
>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
Length = 1232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 37/203 (18%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
F +M L A RI VGD R+ I + E KL I D R + ++D T +
Sbjct: 1003 FGVMWLGASGNRIFVGDIRESITVLKFDEQMAKLSLICDDIRPRWITGATVLDHHTVALV 1062
Query: 291 DRKGSIAVLSC-SDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRK 332
D+ + AV S+ N S N +H+G+++ I K
Sbjct: 1063 DKFDTFAVCRVPSEASASNLSSALNSGSLEAVMPTILGVGNKFEQEAQFHLGDLSTCIDK 1122
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI 391
+ C E+ ++ +T+LGSI IP ISS+E + L+ ++ +A
Sbjct: 1123 VTL------------CSGCTEA----VVYATILGSIGALIPFISSDELDTLQHLELLMAN 1166
Query: 392 HPLTAPLLGNDHSEFRSRENPVR 414
PL G +HS +RS PV+
Sbjct: 1167 E--NPPLSGREHSIYRSYYGPVQ 1187
>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1212
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ + I+ L +RI VGD + G+ Y KL D R
Sbjct: 971 QMLRKAQAEVSAQRIVSLNTQGSRIVVGDVQQGVTLVVYKSATNKLIPFADDTVARWTTC 1030
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAY 321
++D ++ D+ G++ ++ C ++ + A E + TP+ C +
Sbjct: 1031 TTMVDYESIAGGDKFGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRLGLMCHF 1090
Query: 322 HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYE 380
+ ++ SI K S + Q ++ S ++G+I +FIP +S E+ +
Sbjct: 1091 YTQDVPTSITKTSLVV----------------GGQEILLWSGIMGTIGVFIPFVSREDAD 1134
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ ++ L PL G DH +R PV+
Sbjct: 1135 FFQNLEQHLRTE--DPPLAGRDHLMYRGYYAPVK 1166
>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
Length = 1217
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 44/196 (22%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ + + Y + +L D R + L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLP 340
RL N S + + P YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
+++ +TL G I I +P +S E+++ + ++ + + PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLC 1156
Query: 400 GNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1157 GRDHLSFRSYYFPVKN 1172
>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
Length = 1217
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 44/196 (22%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ + + Y + +L D R + L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLP 340
RL N S + + P YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
+++ +TL G I I +P +S E+++ + ++ + + PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLC 1156
Query: 400 GNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1157 GRDHLSFRSYYFPVKN 1172
>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
Length = 1230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ +I+ L+ +RI VGD + G+ + Y + KL D R +
Sbjct: 989 QMLRKAQADVAPQLIVSLSTQGSRIVVGDVQQGVTYVVYKPLSNKLIPFVDDTVARWMTC 1048
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSF 335
++D ++ D+ G+I ++ ++ A E +LT Y G + + S
Sbjct: 1049 TTMVDYESVAGGDKFGNIFIVRAPEKASQEADEEGAGLHLTNTRDYLHG----TPHRLSL 1104
Query: 336 IYKLPADDALGDCLAS--FESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
+ + D L + Q ++ S + G+I +FIP ++ E+ + + ++ L
Sbjct: 1105 VSHFYSQDVLTSITKTSLVVGGQDVLLWSGISGTIGVFIPFVTREDADFFQTLEQHLRTE 1164
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
APL G DH +R PV+
Sbjct: 1165 --DAPLAGRDHLMYRGYYAPVK 1184
>gi|328872326|gb|EGG20693.1| hypothetical protein DFA_00554 [Dictyostelium fasciculatum]
Length = 1355
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 105/276 (38%), Gaps = 21/276 (7%)
Query: 140 REIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRY 199
+ ++ Y E +SS ++ A I L+E + + P + +I P D
Sbjct: 1020 KNLIIYGGESNQNSSTRNNRGIAYFLNIHLQEVDIGITEFK-TLQQPIPINSIVPLSDGN 1078
Query: 200 FLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHE 259
+ S N + N + + + + R+ G +DG+ Y+Y+
Sbjct: 1079 IIVSTSNETTILDIANRTNTSLMNAIITTSSIQCISYQPITNRVLFGTLKDGMFLYNYNS 1138
Query: 260 DARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNC 319
L + A CV + + DR G+ VL + L+ + P
Sbjct: 1139 SNNSLRKKIGQNMPLATAQCVFITDELFAGIDRFGNFLVLEYDELLDADVDRYEVRDPVS 1198
Query: 320 AYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEY 379
Y SI++G LG L E S I+AS G + +F + EEY
Sbjct: 1199 NY-------SIKEG----------CLG--LQRMEQSNN-ILASGSSGGLYLFARLGKEEY 1238
Query: 380 ELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
++LE +Q+ L LT L GNDH +RS + V+
Sbjct: 1239 QILETLQSILCQFDLTKSLTGNDHQCYRSEVSMVKN 1274
>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
Length = 1212
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 36/200 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L A +RI VGD + GI + + + KL D R ++D +T D+
Sbjct: 985 IVSLNAQGSRIVVGDVQQGITYVVFKQQTNKLIPFVDDTVARWTTCSTMVDYETTAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGSF 335
G+I ++ + + A E L C + +I SI K S
Sbjct: 1045 FGNIFIVRAPQKASEEADEEPAGLHLLNARSYLHGTSHRLDLMCHLYTQDIPTSITKTSL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S L+G+I + IP ++ E+ + ++++ L
Sbjct: 1105 VV----------------GGQEVLLWSGLMGTIGVLIPFVTREDADFFQSLEQHLRAE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G DH +RS P++
Sbjct: 1147 DPPLAGRDHLMYRSYYAPMK 1166
>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
Length = 1212
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ I F Y KL D R ++D +T D
Sbjct: 984 LIVGLQTQGSRIIVSDVQESITFVVYKFQENKLIPFADDTIARWTTCTTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEI-AVSIRKGSFIYKLPADDALGD 347
+ G++ +L C + + A E +L Y G V++ +F +P +
Sbjct: 1044 KFGNLWLLRCPTKASEEADEEGSGAHLVHERQYLQGAPHRVALMAHNFANDIPTSIQKTN 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+A + ++ S L G+I I IP +S E+ + + ++ L APL G DH +
Sbjct: 1104 LVAG---GRDCLLWSGLQGTIAIMIPFVSREDVDFFQTLEQHLRTE--DAPLAGRDHLIY 1158
Query: 407 RSRENPVR 414
RS PV+
Sbjct: 1159 RSYYVPVK 1166
>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
Length = 1197
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 100/265 (37%), Gaps = 46/265 (17%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E QL L ++T + A+C + R L S G A + +++ R R
Sbjct: 914 VEGMQLVLVHTTEIDDIPHAMCEFQGR-LLVSVGRALRIYDL---GKKKMLRKCENRNFP 969
Query: 232 MIML-LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I++ L A RI D + F Y +D +L D R + VL+D DT +
Sbjct: 970 SILVELKAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLCGA 1029
Query: 291 DRKGSIAVLSCSDRLEDNA-----------SPECNLTPN-----CAYHMGEIAVSIRKGS 334
D+ G++ V + D S N PN +H+G++ S+ + S
Sbjct: 1030 DKFGNVFVSRLPSEVSDEIDNPTGNRILWDSGLLNGAPNKLEQVAQFHVGDVVTSMVRSS 1089
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLA 390
+ +I +T++G I IP +S E Y LE +
Sbjct: 1090 LV----------------PGGTEAVIYATIMGRIGALIPFTSREDVDFYTHLE-----MY 1128
Query: 391 IHPLTAPLLGNDHSEFRSRENPVRK 415
+ PL G DH +RS PV+
Sbjct: 1129 MRQEQPPLCGRDHLSYRSYYIPVKN 1153
>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 655 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKRRLLRKCE 700
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 701 NKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 760
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 761 TMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVT 820
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I P G+C II T++GS+ + +S ++ + ++
Sbjct: 821 CLQKASLI---PGG---GEC----------IIYGTVMGSLGALLAFTSRDDVDFFSHLEM 864
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ HP PL G DH +RS PV+
Sbjct: 865 HMRQEHP---PLCGRDHMAYRSAYFPVK 889
>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKRRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I P G+C II T++GS+ + +S ++ + ++
Sbjct: 1101 CLQKASLI---PGG---GEC----------IIYGTVMGSLGALLAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ HP PL G DH +RS PV+
Sbjct: 1145 HMRQEHP---PLCGRDHMAYRSAYFPVK 1169
>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
206040]
Length = 1212
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 36/201 (17%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I L+ RI VGD + GI + Y + KL D R ++D +T D
Sbjct: 984 LINSLSTQGNRIIVGDVQQGITYVVYKQTTNKLIPFVDDTVARWTTCSTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGS 334
+ G+I V+ + + A E L C + +I SI K S
Sbjct: 1044 KFGNIFVVRSPQKASEEADEEQAGLHLLNARDYLHGRSHRLDLMCHLYTQDIPTSITKTS 1103
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ Q ++ S L+G+I + IP ++ E+ + ++++ L +
Sbjct: 1104 LVV----------------GGQDVLLWSGLMGTIGVLIPFVTREDTDFFQSLE--LHLRA 1145
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1146 EDPPLAGRDHLMYRSYYAPVK 1166
>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1214
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD ++ + + Y +L D R ++ ++D +T + DR
Sbjct: 984 IVTLATQGSRILVGDMQESMAYAVYKPPENRLLVFADDVQPRWISSSTMVDYNTVIAGDR 1043
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIR 331
G++ V +RL+ S + + P C YH+G+I S+
Sbjct: 1044 FGNVFV----NRLDAKVSEQVDDDPTGAGILHEKGLLMGAPHKTKMLCHYHVGDIVTSLS 1099
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K +A + I+ + L G+I + +P +S E+ + + ++ +
Sbjct: 1100 K----------------VALVPGGREVILYTGLHGTIGVLVPFVSKEDVDFISTLEQHMR 1143
Query: 391 IHPLTAPLLGNDHSEFRSRENPVR 414
L+G DH +R PV+
Sbjct: 1144 TELTQFGLVGRDHLSWRGYYVPVK 1167
>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 122/322 (37%), Gaps = 59/322 (18%)
Query: 119 DCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSS----PDDASCDGIKLEETET 174
D F S S R+ +VG A + + C+S + DG LE
Sbjct: 877 DNNEAAFSLAVVSFSARSGELHLVVGTAQDTFLAPRSCTSGFLRTYRFTDDGTNLE---- 932
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
L + T + LA+ + R +A G A + + + +R+ I+
Sbjct: 933 ----LLHKTETNDVPLAVLGFQGR-LVAGVGKALRL--YDMGKKKLLRKVENKTFASAIV 985
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
L +RI VGD ++ + F Y KL D R + ++D +T +DR G
Sbjct: 986 SLATQGSRILVGDMQESVSFAVYKPPENKLLVFADDTQPRWTSAMTMVDYNTVASADRFG 1045
Query: 295 SIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIRKG 333
+I V +RL+ S + + P A +H+G+I SI K
Sbjct: 1046 NIYV----NRLDPKVSEQVDDDPTGAGILHEKGLLAGAPHKTELLSHFHVGDIVTSINKV 1101
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + + ++ + L G+I I +P +S E+ + + ++ +
Sbjct: 1102 SLV----------------AGGREVLLYTGLHGTIGILVPFVSKEDVDFISTLEQHMRTE 1145
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
L+ L+G DH +R PV+
Sbjct: 1146 QLS--LVGRDHLTWRGYYVPVK 1165
>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
Length = 541
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
RI V D ++ + Y + +L D + R + + ++D DT +SD+ G++AV+
Sbjct: 323 RIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNVAVMRL 382
Query: 300 --SCSDRLEDNASPECNLTP----NCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
S SD ++++ + L N A GE+ V+ G + L +
Sbjct: 383 PHSVSDDVDEDPTGNKALWDRGLLNGASQKGEVVVNFHVGETVTSLQRATLI-------P 435
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ +T G++ +P +S E+++ + ++ + + APL G DH FRS P
Sbjct: 436 GGSEALLYATAGGALGALLPFTSREDHDXFQHLE--MHMRSENAPLCGRDHLSFRSYYYP 493
Query: 413 VR 414
V+
Sbjct: 494 VK 495
>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
Length = 1209
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 221 VRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+R F +G+ R + I+ L+ +RI VGD + I F +Y +L I+
Sbjct: 958 LRIFDMGKKRLLRKCENKSFATAIVTLSTQGSRIIVGDMAESIYFATYKPPENRL-LIFA 1016
Query: 270 DPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAV 328
D SQ R + ++D DT D+ G++ V +RL + + P A + E
Sbjct: 1017 DDSQPRWITASAMVDYDTVCAGDKFGNVFV----NRLPPKVGEQVDEDPTGAGVLHE--- 1069
Query: 329 SIRKGSFI-----YKLPADDALGDCLASFES------SQTTIIASTLLGSIVIFIP-ISS 376
KG F+ + A +GD + S + ++ + L G+I + IP IS
Sbjct: 1070 ---KGLFMGAPHKTNMLAHYYVGDIITSMHKVALVTGGRDIVLYTGLHGTIGVLIPFISK 1126
Query: 377 EEYELLEAVQARLAIHPLTAP-LLGNDHSEFRSRENPVR 414
E+ + + ++ + AP L+G DH +R PV+
Sbjct: 1127 EDVDFIRTLEQHMRTE---APSLVGRDHLTYRGYYVPVK 1162
>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
purpuratus]
Length = 949
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 41/205 (20%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
F+ +LT R+ + D ++ + F Y ++ D + R + L+D DT + +
Sbjct: 721 FITNILTTG-NRVIISDVQESLHFLKYKRQENQMVIFADDSNPRWITATCLLDHDTVMCA 779
Query: 291 DRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIR 331
D+ G+I VL S +D L+++ AS + ++ ++ +GE +S++
Sbjct: 780 DKFGNITVLRLPTSVNDNLDEDPTGVKALWDRGLLNGASQKTDVV--SSFFIGETVLSLQ 837
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
K + I +++ +TL G+I + +P ++ E+++ + ++ +
Sbjct: 838 KATLI----------------PGGSESVVYTTLSGAIGVLVPFTAHEDHDFFQHLE--MH 879
Query: 391 IHPLTAPLLGNDHSEFRSRENPVRK 415
+ APL G DH +RS PV+
Sbjct: 880 MRSEYAPLCGRDHLSYRSYYYPVKN 904
>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
Length = 1212
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M+ L A R VGD + F Y A +L + D + R + L+D++T V D
Sbjct: 987 MVKTLQAAGDRAFVGDMMQSMQFIRYDSTANRLVLVAKDRNPRPITCQELLDINTVAVGD 1046
Query: 292 RKGSIAVL-----------------SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGS 334
+ G++ +L + D D+A+P+ L C YH+GE+ S+ + S
Sbjct: 1047 KFGNVTILRLPRGADAGAIDVTGTRALWDSARDDATPK--LETLCTYHVGEVVTSMTRAS 1104
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHP 393
+ ++I T+ G + F+P +S ++ E +++ L
Sbjct: 1105 LV----------------AGGAESLIYVTVTGRVGAFVPFTSRDDVEFYTSLEGFLRTE- 1147
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
T G D +RS P++
Sbjct: 1148 -TPRPTGRDPQSYRSYYAPMK 1167
>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
Length = 1212
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
RI V D + Y D +L DP R V +D DT V+D+ G++AVL
Sbjct: 998 RIFVADAAMSVHLARYVRDRNRLAVFADDPVGRCVTAFAPLDYDTVAVADKFGNVAVLRL 1057
Query: 300 --SCSDRLED----------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD 347
CSD ++D N LT YH+G++ ++RK + + A A G
Sbjct: 1058 GPECSDDVDDAAGDAWDNGRNGGAPNKLTQLAHYHVGDVVTALRKATLV----AGGAEG- 1112
Query: 348 CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
I+ +T+ G + +P +S E A + + AP+ G DH +R
Sbjct: 1113 -----------IVYATVSGGVGALVPSASREDRDFFA-HLEMHMRQELAPVTGRDHVSYR 1160
Query: 408 SRENPVR 414
S PV+
Sbjct: 1161 SYYLPVK 1167
>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
3D7]
gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
3D7]
Length = 1329
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D R+ +L + Y + L I D R + ++D T + +D+ S+ +L
Sbjct: 1111 NRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFILR 1170
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE------S 354
E+ E +T C Y GEI S K + + + +G+ + S + +
Sbjct: 1171 VP---EEAKQDEYGITNKCWYG-GEIMNSSTKNRKLEHMMSF-HIGEIVTSMQKVRLSPT 1225
Query: 355 SQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
S II ST++G+I FIP + EE EL + ++ L PL G +H FRS +PV
Sbjct: 1226 SSECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTE--KPPLCGREHIFFRSYYHPV 1283
Query: 414 R 414
+
Sbjct: 1284 Q 1284
>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1213
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 54/289 (18%)
Query: 151 SSSSLCSSPDDASCDG--IKLEE-TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNA 207
++ L +P D CDG + L E + L + T G+ A+C + R L GNA
Sbjct: 909 TAVGLTFAPRD--CDGGFVHLYRYLEDGTVTLVHKTPLDGVPGAMCGFKGRLLLG-CGNA 965
Query: 208 FYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFT--RIAVGDCRDGILFYSYHEDARKLE 265
+ F R V F + T H + RI VGD ++ F Y + L
Sbjct: 966 LRLYDFGKKKLLR----KVENRNFPNFITTVHASGDRIYVGDVQESFHFVKYKREDLSLI 1021
Query: 266 QIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN------- 318
+ D R + + +D DT +D+ G++ V RL + S + P
Sbjct: 1022 IVADDVQPRHITAALPLDYDTMAGADKFGNVFVA----RLAQDVSADIEEDPTGGKASGG 1077
Query: 319 ------------CAYHMGEIAVSIRKGSFIYKLPADDALG-DCLASFESSQTTIIASTLL 365
+H+GE ++ KG+ A G +C+ + +TL+
Sbjct: 1078 TLNGAPRKVEHVAQFHVGETVCALTKGTL-------QAGGLECM----------LYATLM 1120
Query: 366 GSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
G++ +P +S ++ A + + PLLG DH +RS PV+
Sbjct: 1121 GTVGALMPFTSRA-DVDFATHLEMHVRQENPPLLGRDHMAYRSAYFPVK 1168
>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1212
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L+ +RI VGD + G+ + Y KL D R V ++D ++ D
Sbjct: 984 LIVSLSTQGSRIVVGDVQHGVTYVVYKPTTNKLIPFVDDTIARWVTCTTMVDYESVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD 347
+ G++ ++ C ++ A E L H +++ S+ +P
Sbjct: 1044 KFGNMFLVRCPEKASQEADEEQAGLHLLNTRDYLHGAPHRLNLLSHSYTQDVPTSITKTS 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ S + G+I +FIP ++ E+ + + ++ + APL G DH +
Sbjct: 1104 LVVG---GQDVLLWSGINGTIGVFIPFVTREDVDFFQNLEQHMRTE--DAPLAGRDHLMY 1158
Query: 407 RSRENPVR 414
R PV+
Sbjct: 1159 RGYYVPVK 1166
>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
Length = 1212
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 46/206 (22%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
MIM L TRI VGD ++ + + Y +L D S R +++D +T D
Sbjct: 985 MIMTLNTQGTRIIVGDAQESVYYALYKAPENRLLIFADDISPRWTTASIMVDYETVAAGD 1044
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSI 330
+ G+ V +RL S + + P A YH+G+I S+
Sbjct: 1045 KFGNFFV----NRLPKGVSSDVDDDPTGAGIMHEKPYLMGAPHRTHLLAHYHIGDIITSL 1100
Query: 331 RKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARL 389
K +A + ++ + L+G++ + +P +S+E+ + ++ L
Sbjct: 1101 HK----------------VALVAGGRDLLVYTGLMGTVGVLVPFVSNEDVDFFTTLEMHL 1144
Query: 390 AIHPLTAP-LLGNDHSEFRSRENPVR 414
AP L G +H +RS PV+
Sbjct: 1145 RSE---APSLCGREHLAYRSAYTPVK 1167
>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1213
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 23/290 (7%)
Query: 133 SQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAI 192
S R +VG A + + S C+S K E L + T + LA+
Sbjct: 892 SARNGELHLVVGTAADTIVSPRSCTS---GYLRTYKFT-NEGAGLEFQHKTEVDDVPLAL 947
Query: 193 CPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGI 252
+ R +A G A + + + +R+ I+ L+ +RI VGD ++ I
Sbjct: 948 LAFQGR-LVAGVGKALRI--YDIGKKKLLRKVENKTFSSAIVTLSTQGSRIIVGDMQESI 1004
Query: 253 LFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASP 311
F Y +L ++ D SQ R + ++D +T V DR G+I V +RL+ S
Sbjct: 1005 QFAVYKPPENRL-LVFADDSQPRWITASSMVDYNTIVAGDRFGNIFV----NRLDPKVSE 1059
Query: 312 ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLL 365
+ + P A + E + + K+ A LGD + S + ++ + L
Sbjct: 1060 QVDDDPTGAGILHEKGI-LMGAPHKTKMLAHFHLGDLVTSIHKVSLVAGGREVLMYTGLH 1118
Query: 366 GSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
G+I I +P +S E+ + + ++ + + L+G D +R PV+
Sbjct: 1119 GTIGILVPFVSKEDVDFISTLEQHMRTE--QSSLVGRDQLSWRGYYAPVK 1166
>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1212
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 36/200 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ Y + KL D R ++D ++ D+
Sbjct: 985 IVSLNTQGSRIVVGDVQQGVTLVVYKPASNKLIPFADDTIARWTTCTTMVDYESVAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGSF 335
G++ ++ + + A E L C + ++ SI K S
Sbjct: 1045 FGNMFIVRSPAKASEEADEEQAGLHLVNARDYLHGAQHRLELMCHFFTQDVPTSINKTSL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + ++++ L
Sbjct: 1105 VV----------------GGQDVLLWSGIMGTIGVFIPFVSREDADFFQSLEQHLRTE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVR 414
APL G DH +RS PV+
Sbjct: 1147 DAPLAGRDHLMYRSYYAPVK 1166
>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
Length = 1285
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L A +RI VGD ++ ++F SY +L D R V C ++D DT +D+
Sbjct: 1057 IVALDAQGSRIVVGDMQESVIFASYKPLENRLVTFADDIMPRYVTRCTMLDYDTVAAADK 1116
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G++ V+ R++ + S + M E + + + L A +GD + S
Sbjct: 1117 FGNVYVV----RIDADTSRSVDEDVTGMTTMHEKPL-LMGAAHKATLLAHYFVGDIITSL 1171
Query: 353 ESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ + ++ + + G+I +P +S E+ + + ++ +L + L+G DH
Sbjct: 1172 SRAVMVPGGREVLLYTGISGTIGALVPFVSKEDVDTMTTLEMQLRQQ--SDSLVGRDHLA 1229
Query: 406 FRSRENPVR 414
+RS PV+
Sbjct: 1230 YRSSYAPVK 1238
>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
Length = 1197
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 101/265 (38%), Gaps = 46/265 (17%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E QL L ++T + A+C + R L S G A + +++ R R
Sbjct: 914 VEGMQLVLVHTTEIDDIPHAMCEFQGR-LLVSVGRALRIYDL---GKKKMLRKCENRNFP 969
Query: 232 MIML-LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I++ L A RI D + F Y +D +L D R + VL+D DT +
Sbjct: 970 SILVELKAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLCGA 1029
Query: 291 DRKGSIAVLSCSDRLEDNA-SPECNL----------TPN-----CAYHMGEIAVSIRKGS 334
D+ G++ V + D +P N PN +H+G++ S+ + S
Sbjct: 1030 DKFGNVFVSRLPSEVSDEIDNPTANRILWDSGLLNGAPNKLEQVAQFHVGDVVTSMVRTS 1089
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLA 390
+ II +T++G I IP +S + Y LE +
Sbjct: 1090 LV----------------PGGIEAIIYATIMGRIGALIPFTSRQDVDFYTHLE-----MY 1128
Query: 391 IHPLTAPLLGNDHSEFRSRENPVRK 415
+ PL G DH +RS PV+
Sbjct: 1129 MRQEQPPLCGRDHLSYRSYYIPVKN 1153
>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1196
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 25/250 (10%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L L +ST G V A+C Y + LA N+ + + + +R+ I L
Sbjct: 917 LNLVHSTPTDGPVGALCGY-KGHLLAGVNNSLRIYDY--GKKKLLRKVENRNFPNFITTL 973
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI 296
A RI VGD ++ I + Y D + D R + + +D DT +D+ G+I
Sbjct: 974 HAAGDRIYVGDVQESIHYVKYKADEGSIYIFADDTKPRYITATLPLDYDTLAGADKFGNI 1033
Query: 297 AVLSCSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
V +RL + S + + P Y G + + K + A +G+ + +
Sbjct: 1034 FV----NRLPKDVSEDMDDDPTGGKNIYSQGVLNGAPNKS----ETSAQTYIGETVCALT 1085
Query: 354 SSQ------TTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIHPLTAP-LLGNDHSE 405
I+ T +G I +P SS E E ++ + AP ++G DH
Sbjct: 1086 KGALQPGGIEIIMYGTFMGGIGCLLPFSSRSEIEFFTHLEMHMRQE---APSIVGRDHMA 1142
Query: 406 FRSRENPVRK 415
FRS PV+
Sbjct: 1143 FRSYYAPVKN 1152
>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1213
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 46/205 (22%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSD 291
I+ L +RI VGD ++ I + Y +L I+ D +Q R + ++D +T D
Sbjct: 985 IVTLNTQGSRIIVGDMQESIFYAVYKPPENRL-LIFADDAQPRWITAVTMIDYNTVAAGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSI 330
R G++ V +RL+ S + + P A +H+G+I SI
Sbjct: 1044 RFGNVFV----NRLDPKISDQVDDDPTGAGILHEKGILMGAPHKTAMIAHFHVGDIVTSI 1099
Query: 331 RKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARL 389
K S + + ++ + L G++ I +P +S E+ + + ++ +
Sbjct: 1100 HKVSLV----------------AGGRELLLYTGLHGTVGILVPFVSKEDVDFISTLEQHM 1143
Query: 390 AIHPLTAPLLGNDHSEFRSRENPVR 414
L+ L+G DH +R PV+
Sbjct: 1144 RTEQLS--LVGRDHLAWRGYYVPVK 1166
>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
Length = 1212
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 36/200 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L+ +RI VGD + GI + Y + KL D R ++D +T D+
Sbjct: 985 IISLSTQGSRIVVGDVQQGITYAVYKQSTNKLIPFVDDTVARWTTCTTMVDYETVAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGSF 335
G+I ++ + + A E L C +I SI K S
Sbjct: 1045 FGNIFIVRSPQKASEEADEEQAGLHLLNARDYLHGTSHRLDLMCHLFTQDIPTSIAKTSL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S L+G+I + IP I+ E+ + ++++ +
Sbjct: 1105 VV----------------GGQDVLLWSGLMGTIGVLIPFITREDTDFFQSLEQHMRAE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G DH +RS P++
Sbjct: 1147 DPPLAGRDHLMYRSYYAPMK 1166
>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIISIHAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGTDKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1101 CLQKASLI---PGG---GEC----------IVFGTVMGSVGALHAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ HP PL G DH +RS PV+
Sbjct: 1145 HMRQDHP---PLCGRDHMAYRSAYFPVK 1169
>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
24927]
Length = 1308
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I LT RI V D ++ + + Y + KL D R L+D ++ D
Sbjct: 1080 LITGLTTQNNRIIVSDIQESVTYVVYKQQENKLIPFADDMVPRWTTCTALLDYESVAGGD 1139
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA--------VSIRKGSFIYKLPADD 343
+ G++ V+ R AS E + P+ Y + E + V++ F +P
Sbjct: 1140 KFGNLWVV----RAPPKASEEADEDPSSGYLLHEKSYLQGAPNRVNLMSHFFTQDVPTSI 1195
Query: 344 ALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGND 402
+ +A + ++ S L G+I I +P IS E+ + + ++ + APL G D
Sbjct: 1196 QKVNLVAG---GRDCVVWSGLQGTIGIMVPFISREDVDFFQTLEQHMRTE--DAPLAGRD 1250
Query: 403 HSEFRSRENPVR 414
H +RS PV+
Sbjct: 1251 HLIYRSYYVPVK 1262
>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1216
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 113/290 (38%), Gaps = 20/290 (6%)
Query: 133 SQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAI 192
S R + +VG A + + CSS K E T L L + T + LA+
Sbjct: 892 SARGNELHLVVGTAADTFLAPRSCSS---GFLRTYKFTEDGT-GLELLHKTETDDVPLAL 947
Query: 193 CPYLDRYFLASAGNAFYVCGFPNDNPQR-VRRFAVGRTRFMIMLLTAHFTRIAVGDCRDG 251
+ R +A G A + R V A I+ L +RI VGD ++
Sbjct: 948 MAFQGR-LVAGVGKALRIYDIGKKKLLRKVENKARATFSTAIVTLNTQGSRIIVGDMQES 1006
Query: 252 ILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASP 311
I F +Y +L D R + ++D T DR G+I V +RL+ S
Sbjct: 1007 ISFVAYKAPENRLLVFADDNQPRWITATTMVDYTTIAAGDRFGNIFV----NRLDPKVSE 1062
Query: 312 ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLL 365
+ + P A + E + + K+ A +GD + S + ++ + L
Sbjct: 1063 QVDDDPTGAGILHEKGL-LMGAPHKTKMLAHFHIGDLVTSINKVSLVAGGREVLLYTGLH 1121
Query: 366 GSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
G+I I +P +S E+ + + ++ + L+G D +R PV+
Sbjct: 1122 GTIGILVPFVSKEDVDFISTLEQHMRTE--QGSLVGRDQLSWRGYYTPVK 1169
>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
queenslandica]
Length = 1214
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 53/273 (19%)
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
S DG KLE T QL + +A+ P+ R L G + + + +R
Sbjct: 928 SPDGSKLEHVHTTQLD--------DVPIAMAPFQGR-LLVGVGKLLRI--YDIGKKKMLR 976
Query: 223 RFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
+ ++++ + R+ VGD ++ + F Y +L + R ++
Sbjct: 977 KCENKHLPYLVVDIKVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCIL 1036
Query: 283 DVDTAVVSDRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGE 325
D +T +D+ G+I +L +D+++++ S +L +YH+GE
Sbjct: 1037 DYNTVASADKFGNITILRLPSDVTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGE 1096
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YEL 381
++ K S I ++ +TL GSI I +P SS+E ++
Sbjct: 1097 GINTLHKVSLI----------------PGGSEVLVYTTLSGSIGILVPFSSKEDSDFFQH 1140
Query: 382 LEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
LE + + + L+G DH FRS PV+
Sbjct: 1141 LE-----MHMRSEWSNLVGRDHLSFRSYYVPVK 1168
>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKRRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIVSIHAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHIGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1101 CLQKASLI---PGG---GEC----------IVFGTVMGSVGALHAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ HP PL G DH +RS PV+
Sbjct: 1145 HMRQDHP---PLCGRDHMAYRSAYFPVK 1169
>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
Length = 1172
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
++ +T TRI D + ++ Y L D + R VL+D T +D+
Sbjct: 945 VVHITTMGTRICAADQKHSFVWLKYKPAENALTIFADDTNPRWCTRGVLLDYQTVAGADK 1004
Query: 293 KGSIAV----LSCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKG 333
G+ V +D+++D+ AS + ++ C YH+GE +S++K
Sbjct: 1005 FGNFVVARLGTDLTDQIDDDPTGSKAFWSRGILNGASQKMDIL--CNYHVGETILSLQKV 1062
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ + P +C I+ +T+ G I +F+P S+ +++E +++ L +
Sbjct: 1063 TLV---PGG---AEC----------ILYTTMSGGIGLFLPFSNRDDFEFFTSLE--LHLR 1104
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
APL G DH +RS PV+
Sbjct: 1105 QEHAPLCGRDHLHYRSAYFPVK 1126
>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
Length = 1229
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y + +L D R ++D D+ +D
Sbjct: 988 LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGAD 1047
Query: 292 RKGSIAVLSCSDRL---EDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C ++ D E +L + Y G S R + D C
Sbjct: 1048 KFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHG---TSNRLALMAHVYTQDIPTSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ G+I + IP +S E+ + ++++ L PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVR 414
R PV+
Sbjct: 1163 RGCYVPVK 1170
>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
Length = 1216
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y + +L D R ++D D+ +D
Sbjct: 988 LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGAD 1047
Query: 292 RKGSIAVLSCSDRL---EDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C ++ D E +L + Y G S R + D C
Sbjct: 1048 KFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHG---TSNRLALMAHVYTQDIPTSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ G+I + IP +S E+ + ++++ L PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVR 414
R PV+
Sbjct: 1163 RGCYVPVK 1170
>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
putative [Candida dubliniensis CD36]
gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
Length = 1187
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 241 TRIAVGDC-RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
RI + D + I+F + + + D +R + + +D+DT + D+ G+I V
Sbjct: 969 NRIIICDSHKSSIIFAKFDDSQNQFVPFADDIMKRQITSIMNLDIDTLIGGDKFGNIFVT 1028
Query: 300 SCSDRLEDNASPECNLTP-------NCAY--------HMGEIAVSIRKGSFIYKLPADDA 344
+ + A + + +C Y H+G+I S+ G
Sbjct: 1029 RIDEDISKQADDDWTILKSQEGILNSCPYKLQNLIEFHIGDIITSLNLGCL--------- 1079
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
LA ES +I + L G+I + +P +S E ELL +Q L + L+G DH
Sbjct: 1080 ---NLAGTES----VIYTGLQGTIGLLVPLVSKSEVELLFNLQ--LLMQQFQNNLVGKDH 1130
Query: 404 SEFRSRENPVR 414
+FRS NP++
Sbjct: 1131 LKFRSYYNPIK 1141
>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
Length = 1223
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y + +L D R ++D D+ +D
Sbjct: 988 LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGAD 1047
Query: 292 RKGSIAVLSCSDRL---EDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C ++ D E +L + Y G S R + D C
Sbjct: 1048 KFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHG---TSNRLALMAHVYTQDIPTSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ G+I + IP +S E+ + ++++ L PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVR 414
R PV+
Sbjct: 1163 RGCYVPVK 1170
>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
yoelii]
Length = 1235
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 47/270 (17%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM- 232
++L L + T CP+ R + S GN ++R +A+G+ + +
Sbjct: 939 NYKLNLLHITPIEDQPYCFCPFNGR-VIVSVGN-------------KLRIYALGKKKLLK 984
Query: 233 ----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
I+ + RI D R+ +L + Y + + I D R + ++
Sbjct: 985 KCEYKDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEIL 1044
Query: 283 DVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP-----------NCAYHMGEIAVSIR 331
D T + +D+ S+ +L S L +P C+L P N ++ GE+ S
Sbjct: 1045 DHHTIIAADKFDSVFILRVS-LLTFFITPFCHLVPEEAKQEEYGIANKCWYGGEVINSST 1103
Query: 332 KGSFIYKLPADDALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEA 384
K + + + +G+ + S + +S II ST++G+I FIP S EE EL +
Sbjct: 1104 KNRKMEHIMSFH-IGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDSKEELELTQH 1162
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ L + L G +H FRS +PV+
Sbjct: 1163 LEIILRTEKHS--LCGREHIFFRSYYHPVQ 1190
>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
Length = 1232
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 63/272 (23%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 949 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 994
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 995 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAQH 1054
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1055 IDFDTMAGADKFGNIYFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1114
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1115 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1158
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 1159 HLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 1187
>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii str.
Neff]
Length = 1227
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I +T RI VGD + F Y + +L D + R + ++D DT +D+
Sbjct: 1002 IQSITTQGERIIVGDLAESFHFVKYRKAENQLNVYADDSNPRWLTASQMLDYDTMAGADK 1061
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS- 351
G++ ++ RL + E P + M + S+ +F + + +GD + S
Sbjct: 1062 FGNVFIV----RLPSEVNEELEDNPMGNFLMSK--QSLNGAAFKLQTLINFHVGDTINSM 1115
Query: 352 -----FESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
F ++ +TL+G + +P +S E+ + ++ + + PL G DH
Sbjct: 1116 TKASLFTGGADVLVYTTLMGGMGALLPFVSREDVDFFSHLE--MHMRSELPPLCGRDHLA 1173
Query: 406 FRSRENPVR 414
+RS PV+
Sbjct: 1174 YRSYYFPVK 1182
>gi|430814207|emb|CCJ28534.1| unnamed protein product [Pneumocystis jirovecii]
Length = 904
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 13/119 (10%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELN------NDTCSSDICCVDPLS-GSVL 57
++L ++ LG P+++ YH + ++ V+ +L+ N+ +S + +D S +L
Sbjct: 518 QQLQIQTIPLGELPRRICYHDKQKVFGVLTIKLSLEASNGNEVQTSYLKILDVTSFDGIL 577
Query: 58 SSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQ 116
SF+LEL E + + V + ++ + VVGT S +P E ES+KGR+I+ + + +
Sbjct: 578 DSFQLELNECVQCITSVTIDNQDIFVVGTGFS-----LPE-EEESSKGRIILFGVTNKK 630
>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
Length = 845
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 63/272 (23%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 562 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 607
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 608 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 667
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 668 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 727
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 728 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 771
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 772 HLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 800
>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
Group]
gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
Group]
gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
Length = 1234
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 63/272 (23%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 951 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 996
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 997 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1056
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1057 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1116
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1117 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1160
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 1161 HLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 1189
>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
Length = 1224
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 63/272 (23%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 941 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 986
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 987 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1046
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1047 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1106
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1107 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1150
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 1151 HLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 1179
>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
Length = 1104
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 153/399 (38%), Gaps = 96/399 (24%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCS-SDICCVDPLSGSVLSSFKLE 63
++L+VR LG P+++ +H +R+L V+ L++D S + +D + V++S+ L
Sbjct: 746 QKLHVRAVPLGENPRRIAHHEGARMLGVLTMRLDSDGSERSFLRLLDDTTFDVVASYALA 805
Query: 64 LGET--------GKSMELVRVGHEQV-LVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEH 114
GE G S VG +VGT+ I+P E E TKGR++VL EH
Sbjct: 806 PGEMPCSLAAWPGSSNGTAAVGALNACFLVGTAF-----IVPE-EPEPTKGRILVL--EH 857
Query: 115 MQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCD--GIKLEET 172
++ + + ++ PF + +S+ S + CD G+++E
Sbjct: 858 VR------LVTEKEVKGAAYNVLPF-------VKDKILASVNSKVPASGCDLGGVRVE-- 902
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
LA ++ G +LA+ +LA+ GN
Sbjct: 903 ------LASECSYLGNILAL-------YLATRGNL------------------------- 924
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
+ VGD + SY+ + LE D + +D DT + D
Sbjct: 925 ----------VVVGDLMRSVSLLSYNVEQGVLEHRAADYNSGWTTSVEALDDDTYLEGDN 974
Query: 293 KGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
++ VL R D+A+ E L YH G R GS + + P +
Sbjct: 975 HLNLVVLR---RNADSATDEERARLQVVGEYHTGTFVNRFRHGSLVMRPPDSE------- 1024
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL 389
F S ++ G + + + YE+L +Q+ L
Sbjct: 1025 -FVSLPVPLLFGGTDGRLGVIARLPPGLYEMLTKLQSAL 1062
>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS 6054]
gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1228
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RIA GD I+F + + D +R + +D DT + D+ G++ V
Sbjct: 1011 RIAFGDSHSSIVFAKFDSAENRFVPFADDIMKRQITAVAALDYDTVIGGDKFGNVFVSRV 1070
Query: 302 SDRL-----ED-----------NASPECNLTPN-CAYHMGEIAVSIRKGSFIYKLPADDA 344
D + ED NASP + T N C + + + S KGS
Sbjct: 1071 PDSVSKKSDEDWSLLKVQESYLNASP--SRTKNLCEFFLSDTPTSFTKGSM--------T 1120
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIHPLTAPLLGNDH 403
+G II + + G++ + +P+S++ E + + +++ L + LLG DH
Sbjct: 1121 IG--------GHDGIIYTGIQGTVGLLLPLSTKSEVQFINSLEQSLR-QQMGFNLLGMDH 1171
Query: 404 SEFRSRENPVR 414
+FRS NPV+
Sbjct: 1172 LKFRSYYNPVK 1182
>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum NZE10]
Length = 1223
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 10/187 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L A RI GD +GI + Y ++ D QR ++D +TA D+
Sbjct: 996 IVSLEAQGNRIVCGDVSEGITYVVYKPKFNRMIPFVDDVVQRWTTCTTMVDYETAAGGDK 1055
Query: 293 KGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ V+ C ++ A E + + + +R F +P
Sbjct: 1056 FGNLWVVRCPEQPSQEADEEGAGGFIMNERSYLNGAPYRLDLRAHYFCQDIPTSMQRTAL 1115
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A Q + S L G++ + +P ++ E+ E ++ ++ PL G DH +R
Sbjct: 1116 VA---GGQELLFWSGLQGTLGMLVPFVTREDVEFFTQLEQQMRAE--DPPLAGRDHLMYR 1170
Query: 408 SRENPVR 414
S PV+
Sbjct: 1171 SYYVPVK 1177
>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 63/268 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+ + R LA G+ +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALAQFQGR-LLAGLGSV-------------LRLYDLGKRRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHVDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIIQFHIGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
S++K S I P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1101 SLQKASLI---PGG---GEC----------ILYGTVMGSLGALHAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+ HP PL G DH +RS PV+
Sbjct: 1145 HMRQEHP---PLCGRDHMGYRSAYFPVK 1169
>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 63/273 (23%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E L L + T + L++C + R LA G+ +R + +G+ +
Sbjct: 422 NEGKSLELLHKTQVEEVPLSLCQFQGR-LLAGVGSV-------------LRLYDLGKRKL 467
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 468 LRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAN 527
Query: 281 LMDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHM 323
+D DT +D+ G+I SD +E++ + + N PN +H+
Sbjct: 528 HIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 587
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELL 382
G++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 588 GDVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFF 631
Query: 383 EAVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 632 SHLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 661
>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1210
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 38/202 (18%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAVVS 290
+++ L +RI D ++ + + Y +L Q +CD S C M D +T
Sbjct: 982 ILIGLQTQGSRIVCSDVQESVTYVVYKHLENRLIQ-FCDDSIHRWTSCTAMVDYETTAGG 1040
Query: 291 DRKGSIAVLSCSDRLED------------NASPECNLTPN-----CAYHMGEIAVSIRKG 333
D+ G+I ++ C + + N P TPN ++ +I SI+K
Sbjct: 1041 DKFGNIWLVRCPPKASEEADEEGSGLHLINERPYLQGTPNRLDLLAHFYTQDIPTSIQKT 1100
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
+ + + ++ S L G++ IFIP +S E+ + ++++ +L
Sbjct: 1101 ALV----------------AGGRELLLWSGLQGTLGIFIPFVSREDVDFFQSLEQQLRTE 1144
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
P+ G DH +RS PV+
Sbjct: 1145 --DPPIAGRDHLAYRSYYVPVK 1164
>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
Length = 1229
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 63/272 (23%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 946 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 991
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
++ + + RI VGD ++ + Y D +L D R +
Sbjct: 992 RKCENKLFPRTLVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTTAQH 1051
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1052 IDFDTMAGADKFGNIYFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1111
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1112 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1155
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 1156 HLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 1184
>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1256
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 36/191 (18%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS- 300
R+ VGD ++ I F Y L D + R + V++D DT +D+ G+I VL
Sbjct: 1038 RLVVGDIQESIHFIKYKRSENMLYVFADDLAPRWMTSSVMLDYDTVAGADKFGNIFVLRL 1097
Query: 301 ---CSDRLEDN--------ASPECNLTPNCAYHM-----GEIAVSIRKGSFIYKLPADDA 344
SD +E++ S N P+ H+ G+ ++ K S + P
Sbjct: 1098 PLLISDEVEEDPTGTKLKFESGTLNGAPHKLDHIANFFVGDTVTTLNKTSLVVGGPE--- 1154
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDH 403
I+ +T+ G+I IP +S E+ + ++ + L PL G DH
Sbjct: 1155 -------------VILYTTISGAIGALIPFTSREDVDFFSTLEMNMRSDCL--PLCGRDH 1199
Query: 404 SEFRSRENPVR 414
+RS PV+
Sbjct: 1200 LAYRSYYFPVK 1210
>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
Length = 1644
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 163/441 (36%), Gaps = 84/441 (19%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS-VLSSFKLELG 65
N +K L TP++++ H SR LI++ ++ +S + LS + V++S + E
Sbjct: 1212 FNQQKCFLRYTPRRMVLHPPSRRLIIVESDYGEANAASKQLFGESLSDTPVIASEEPEED 1271
Query: 66 ETGKSMELVRV--GHEQ------VLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN 117
E +++ RV HE V + A + E T R I C+ H
Sbjct: 1272 EDRQALLYPRVERSHEPGKWASCVRIFDPITCETIACHELEDNEHT--RSITTCVFH--- 1326
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
D G F + R P SSP+ ++ E QL
Sbjct: 1327 -DRGGEVFVIIGSVKNLRLHPI-----------------SSPEGGLLRVYRV--VEGSQL 1366
Query: 178 RLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGR--TRFMIML 235
L ++T G+ A+ + R L S G + +++ R R T MI L
Sbjct: 1367 VLVHTTPVDGIPYAMIEFQGR-LLVSVGKVLRIYDL---GKRKLLRKCENRYFTSPMIDL 1422
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+A RI D + I F Y + +L D + L+D DT D+ G+
Sbjct: 1423 KSAG-DRIYASDVHESIHFVKYKAEDNQLITFADDCVPHFMTSSTLLDYDTIAGGDKFGN 1481
Query: 296 IAVL----SCSDRLED-------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
+ V SD +++ N +P L +H+GE+ S+ + S +
Sbjct: 1482 VFVTRLPAEVSDEIDNPTGNRMLWDTGLLNGAPH-KLEQIAQFHVGEVITSVLRTSLV-- 1538
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLAIHPL 394
I+ +T+LG I +P +S + Y LE + +
Sbjct: 1539 --------------PGGMEVILYTTILGRIGALVPFTSRDDVDFYTHLE-----MYMRQE 1579
Query: 395 TAPLLGNDHSEFRSRENPVRK 415
APL G DH +RS PV+
Sbjct: 1580 KAPLCGRDHLSYRSYFIPVKN 1600
>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1236
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ I+ Y KL D R + ++D +T D
Sbjct: 984 LIVGLQTQGSRIVVSDVQESIIMIVYKFQENKLIPFVDDTISRWTSCTTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEI-AVSIRKGSFIYKLPADDALGD 347
+ G++ +L C + + A E +L +Y G +++ F +P +
Sbjct: 1044 KFGNLWLLRCPTKASEEADEEGSASHLVHERSYLQGSPHRLTLMAHFFTQDIPMSIQKTN 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+A + I+ S + G++ I IP +S E+ + + ++ L APL G DH +
Sbjct: 1104 LVAG---GRDCILWSGIQGTLGILIPFVSREDVDFFQTLEQHLRSE--DAPLAGRDHLIY 1158
Query: 407 RSRENPVR 414
RS PV+
Sbjct: 1159 RSYYVPVK 1166
>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1227
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 63/273 (23%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E L L + T + L++C + R LA G+ +R + +G+ +
Sbjct: 943 NEGKSLELLHKTQVEEVPLSLCQFQGR-LLAGVGSV-------------LRLYDLGKRKL 988
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 989 LRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAN 1048
Query: 281 LMDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHM 323
+D DT +D+ G+I SD +E++ + + N PN +H+
Sbjct: 1049 HIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 1108
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELL 382
G++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1109 GDVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFF 1152
Query: 383 EAVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 1153 SHLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 1182
>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
distachyon]
Length = 1228
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 63/272 (23%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + L++C + R LA G+ +R + +G+ + +
Sbjct: 945 EGKSLELLHKTQVEEVPLSLCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 990
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 991 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1050
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1051 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1110
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1111 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1154
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
++ L HP PL G DH +RS PV+
Sbjct: 1155 HLEMHLRQEHP---PLCGRDHMAYRSAYFPVK 1183
>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
occidentalis]
Length = 1154
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + +Y+ D LE+I D ++D DT + ++ ++ V
Sbjct: 936 ILVGDLMRSMTLLNYNADITSLEEIGRDYQTNWTTAVEILDEDTFLAAESNLNLYVCKRD 995
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
D+ ++ YH+GE+ I KGS + P D L + +
Sbjct: 996 PSAADDTRQ--HMHEVALYHLGEMVNVIVKGSLVMAQPGDMPL--------PLNKSFLYG 1045
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLA 390
+L G++ + +PI E Y +L +Q LA
Sbjct: 1046 SLHGAVGVIVPIKQELYAILNQIQTNLA 1073
>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain ANKA]
gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
Length = 1216
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D R+ +L + Y + + I D R + ++D T + +D+ S+ +L
Sbjct: 998 NRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFIL- 1056
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------ 354
R+ + A E N ++ GE+ S K + + + +G+ + S +
Sbjct: 1057 ---RVPEEAKQEEYGIANKCWYGGEVINSSTKNRKMEHIMSFH-IGEIVTSLQKVKLSPV 1112
Query: 355 SQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
S II ST++G+I FIP + EE EL + ++ L L G +H FRS +PV
Sbjct: 1113 SSECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTE--KHALCGREHIFFRSYYHPV 1170
Query: 414 R 414
+
Sbjct: 1171 Q 1171
>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 44/205 (21%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L+ +RI VGD +D + + Y +L D R ++D DT DR
Sbjct: 986 IISLSVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDR 1045
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIR 331
G++ V RL N S E + P A +H+ +I SI+
Sbjct: 1046 FGNLWV----SRLPKNVSDEVDEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQ 1101
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K S + + ++ + + GSI I +P IS E+ + + ++ +
Sbjct: 1102 KTSLV----------------PGGREVLLYTGVQGSIGILVPFISKEDVDFFQTLEMHMR 1145
Query: 391 IHPLTAPLLGNDHSEFRSRENPVRK 415
L+G DH +R PV+
Sbjct: 1146 NE--MPSLVGRDHLAYRGYYFPVKN 1168
>gi|66826737|ref|XP_646723.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
gi|60474585|gb|EAL72522.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
Length = 1547
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
L S S++ II +LLGS+++F +S EY +L +Q L T PLL NDH +RS
Sbjct: 1423 LKSPLSNKNKIITCSLLGSVIVFGKLSKREYRILNNIQQILKKSNNTRPLLNNDHQLYRS 1482
>gi|397627714|gb|EJK68584.1| hypothetical protein THAOC_10223, partial [Thalassiosira oceanica]
Length = 456
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 35/164 (21%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M+ L A R VGD + F Y A +L + D S R + L+DV+T V D
Sbjct: 231 MVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITCQELLDVNTVAVGD 290
Query: 292 RKGSIAVL-----------------SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGS 334
+ G++ L + D ++A+P+ L C YH+GE+ S+ + S
Sbjct: 291 KFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPK--LETLCTYHVGEVVTSLTRAS 348
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+ ++I T+ G I +P +S E
Sbjct: 349 LV----------------AGGAESLIYVTVTGRIGALVPFTSRE 376
>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
Length = 1114
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 16/174 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + +Y + +E+ D + + ++D DT + ++ ++ L
Sbjct: 902 IVVGDLMKSVSLLAYKPEESVIEERARDYNANWMTAVDILDDDTYLGAENNFNLFTLR-- 959
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
R D A+ E L YH+GE R+GS + +LP + + T++
Sbjct: 960 -RQSDAATDEERSRLEVVGEYHVGEFVNRFRRGSLVMRLPDQE---------NADVPTLL 1009
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E++E L A+QA A++ + + G H +RS +N R
Sbjct: 1010 FGTVSGVIGVLATLPREQFEFLSALQA--ALNKTVSGVGGLSHDAWRSFQNEHR 1061
>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 44/205 (21%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L+ +RI VGD +D + + Y +L D R ++D DT DR
Sbjct: 986 IISLSVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDR 1045
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIR 331
G++ V RL N S E + P A +H+ +I SI+
Sbjct: 1046 FGNLWV----SRLPKNVSDEVDEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQ 1101
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K S + + ++ + + GSI I +P IS E+ + + ++ +
Sbjct: 1102 KTSLV----------------PGGREVLLYTGVQGSIGILVPFISKEDVDFFQTLEMHMR 1145
Query: 391 IHPLTAPLLGNDHSEFRSRENPVRK 415
L+G DH +R PV+
Sbjct: 1146 NE--MPSLVGRDHLAYRGYYFPVKN 1168
>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
Length = 1219
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 67/341 (19%)
Query: 103 TKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDA 162
+K ++ ++ N SM+ S +S+ +VG T Q + L +S D +
Sbjct: 871 SKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPASHLVVGVCTNQ---TILPNSYDKS 927
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
K+ + L+L + T + + + D+ +AS GN +R
Sbjct: 928 YLYTFKIGKK---HLQLVHKTELDHIPQVLENFQDKLLVAS-GN-------------HIR 970
Query: 223 RFAVGRTRFM------------IMLLTAHFTRIAVGDC-RDGILFYSYHEDARKLEQIYC 269
+ +G+ + + I + RI + D + I+F + E +
Sbjct: 971 LYDIGQKQLLKKSTTIIDFSTNINKIIPQTNRIIICDSHKSSIVFAKFDESQNQFVPFAD 1030
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP-------NCAY- 321
D +R + + +D+DT + D+ G+I V + + A + + +C Y
Sbjct: 1031 DVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTILKTQDGILNSCPYK 1090
Query: 322 -------HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP- 373
H+G+I S G LA ES +I + L G+I + IP
Sbjct: 1091 LQNLIEFHIGDIITSFNLGCL------------NLAGTES----VIYTGLQGTIGLLIPL 1134
Query: 374 ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+S E ELL +Q L + L+G DH + RS NP++
Sbjct: 1135 VSKSEVELLFNLQ--LYMQQSQNNLVGKDHLKLRSYYNPIK 1173
>gi|261329035|emb|CBH12013.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1270
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 74/193 (38%), Gaps = 26/193 (13%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV----DTA 287
+I ++ + I D R F L + DP R V DC ++ D
Sbjct: 949 LIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVARDPELRGVMDCAILQYESRHDVC 1008
Query: 288 VVSDRKGSIAV-----LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSF------- 335
+ D V L+ S + A P L + YHMG++ + +GSF
Sbjct: 1009 LGDDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTSAQYHMGDLITVMHQGSFAPCSVLN 1068
Query: 336 -IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPL 394
+ +PA G C I+ T G+ PISSE + LL+ ++ +A +
Sbjct: 1069 DVVPIPATLVRGVC-------GPQIVYGTSHGAFGAITPISSETFILLKGLEVSVA--SV 1119
Query: 395 TAPLLGNDHSEFR 407
PL G H+ FR
Sbjct: 1120 VPPLGGFTHASFR 1132
>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
Length = 1039
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L + RI VGD + G+ Y+ + KL D R + D ++ D+
Sbjct: 812 IVSLQSQGFRIVVGDVQHGVTMVVYNPVSNKLLPFVDDTIARWTTCLAMADYESVAGGDK 871
Query: 293 KGSIAVLSCSDRLE---DNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G+I ++ C D+ D + L+ +Y H + + F+ +P C
Sbjct: 872 FGNIWIVRCPDKASAEADEPGSDVQLSNGQSYLHGAAHRLQLMAHMFVQDIPT----SIC 927
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLAIHPLTAPLLGNDH 403
S Q ++ S L G+I + IP+ + E ++ LE + + PL G DH
Sbjct: 928 KTSLVVGGQDVLLWSGLQGTIGVLIPLVTRETADFFQTLE-----MHMRNEDPPLAGRDH 982
Query: 404 SEFRSRENPVR 414
+R PV+
Sbjct: 983 LMYRGYHVPVK 993
>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 946 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKRRLLRKCE 991
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VG ++ + Y D +L D R + +D D
Sbjct: 992 NKSFPSSIVSIHAYRDRIYVGGIQESFHYCKYRRDENQLYIFADDSVPRWLTSSYHIDFD 1051
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I SD +E++ + + N PN +H+G++
Sbjct: 1052 TMAGADKFGNIFFARLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVIT 1111
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
S++K S + P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1112 SLQKASLV---PGG---GEC----------IVYGTVMGSVGALHAFTSRDDVDFFSHLE- 1154
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ + PL G DH +RS PV+
Sbjct: 1155 -MHMRQDNPPLCGRDHMAYRSAYFPVK 1180
>gi|72390667|ref|XP_845628.1| damage-specific DNA binding protein [Trypanosoma brucei TREU927]
gi|62359843|gb|AAX80271.1| damage-specific DNA binding protein, putative [Trypanosoma brucei]
gi|70802163|gb|AAZ12069.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1270
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 26/193 (13%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV----DTA 287
+I ++ + I D R F L + DP R V DC ++ D
Sbjct: 949 LIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVARDPELRGVMDCAILQYESRHDVC 1008
Query: 288 VVSDRKGSIAV-----LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSF------- 335
+ D V L+ S + A P L YHMG++ + +GSF
Sbjct: 1009 LGDDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTTAQYHMGDLITVMHQGSFAPCSVLN 1068
Query: 336 -IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPL 394
+ +PA G C I+ T G+ PISSE + LL+ ++ +A +
Sbjct: 1069 DVVPIPATLVRGVC-------GPQIVYGTSHGAFGAITPISSETFILLKGLEVSVA--SV 1119
Query: 395 TAPLLGNDHSEFR 407
PL G H+ FR
Sbjct: 1120 VPPLGGFTHASFR 1132
>gi|397615212|gb|EJK63291.1| hypothetical protein THAOC_16062, partial [Thalassiosira oceanica]
Length = 322
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 35/164 (21%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M+ L A R VGD + F Y A +L + D S R + L+DV+T V D
Sbjct: 97 MVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITCQELLDVNTVAVGD 156
Query: 292 RKGSIAVL-----------------SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGS 334
+ G++ L + D ++A+P+ L C YH+GE+ S+ + S
Sbjct: 157 KFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPK--LETLCTYHVGEVVTSLTRAS 214
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+ ++I T+ G I +P +S E
Sbjct: 215 LV----------------AGGAESLIYVTVTGRIGALVPFTSRE 242
>gi|70954357|ref|XP_746229.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526771|emb|CAH77136.1| hypothetical protein PC000016.02.0 [Plasmodium chabaudi chabaudi]
Length = 372
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 39/259 (15%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM- 232
++L L + T CP+ R + S GN ++R +A+G+ + +
Sbjct: 90 NYKLNLLHITPIEDQPYCFCPFNGR-VIVSVGN-------------KLRIYALGKKKLLK 135
Query: 233 ----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
I+ + RI D R+ +L + Y + + I D R + ++
Sbjct: 136 KCEYKDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEIL 195
Query: 283 DVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
D T + +D+ S+ +L R+ + A E N ++ GE+ S K + + +
Sbjct: 196 DHHTIMAADKFDSVFIL----RVPEEAKQEEYGIANKCWYGGEVISSSTKNRKMEHIMSF 251
Query: 343 DALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLT 395
+G+ + S + +S II ST++G+I FIP + EE EL + ++ + +
Sbjct: 252 H-IGEIVTSLQKVKLSPASSECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTEK 308
Query: 396 APLLGNDHSEFRSRENPVR 414
L G +H FRS +PV+
Sbjct: 309 HALCGREHIFFRSYYHPVQ 327
>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
Length = 1300
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 33/188 (17%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR-LVADCVLMDVDTAVVSDRKGSIAV-- 298
RI GD R G++ + YH +L I D R L + C ++D T + SD+ ++ V
Sbjct: 1084 RIFAGDIRHGVIIFKYHSVQNRLSIIANDIMPRWLTSACEILDYHTVITSDKFDNLIVCR 1143
Query: 299 ----LSCSDRLEDNASPECN---------LTPNCAYHMGEIAVSIRKGSFIYKLPADDAL 345
S + N + + N + P +H+G++ I K L
Sbjct: 1144 VPTEASSNYDFTSNFNSQTNTSSYMKPYQINPVAHFHVGDLVTCIHKNQL-------SPL 1196
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
G T+I T+LGSI PI++++ ++ + L + + L+ DH
Sbjct: 1197 G---------VETLIFGTILGSIGTLTPITNKD-DVDLLCKLELLLRNESPSLMSRDHLM 1246
Query: 406 FRSRENPV 413
FRS PV
Sbjct: 1247 FRSYYAPV 1254
>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
Length = 1213
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 40/194 (20%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI----- 296
RI V D +D F Y +L D ++R + L+D DT +D+ G+I
Sbjct: 995 RIMVHDIQDSFHFLKYKRKDNQLVLFADDVNKRFLTCGCLVDYDTMAGADKFGNIFFVRL 1054
Query: 297 -------------AVLSCSDR-LEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
V + DR L + AS + ++ YH+GE A+S++K + I
Sbjct: 1055 PADVKDDIEEDPTGVKALWDRGLLNGASQKADVV--SVYHIGETALSLQKATLI------ 1106
Query: 343 DALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGN 401
+++ +T+ G I + +P +S E+ + + ++ + + + PL G
Sbjct: 1107 ----------PGGSESLVYTTVSGGIGMLVPFTSREDIDFFQHLE--MHMRQDSPPLCGR 1154
Query: 402 DHSEFRSRENPVRK 415
DH FRS + V+
Sbjct: 1155 DHLWFRSSFSSVKN 1168
>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1216
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI VGD ++ + Y + I+ D SQ R + +D DT +D+ G+I V
Sbjct: 997 RIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFV-- 1054
Query: 301 CSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFE---- 353
+RLE+ S + + P A + G + S K I A +G + S
Sbjct: 1055 --NRLEERVSEKVDDDPTGAVILHEKGFLMGSANKTDLI----AHYNVGSVVTSLTKVSV 1108
Query: 354 --SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ ++ +T+ G++ +P IS+++ E + ++ + I L L+G DH +R
Sbjct: 1109 APGGRDVVVYTTISGAVGALVPFISNDDVEFMTTLE--MHIRSLNTSLVGRDHLAYRGYY 1166
Query: 411 NPVR 414
PV+
Sbjct: 1167 APVK 1170
>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1216
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI VGD ++ + Y + I+ D SQ R + +D DT +D+ G+I V
Sbjct: 997 RIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFV-- 1054
Query: 301 CSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFE---- 353
+RLE+ S + + P A + G + S K I A +G + S
Sbjct: 1055 --NRLEERVSEKVDDDPTGAVILHEKGFLMGSANKTDLI----AHYNVGSVVTSLTKVSV 1108
Query: 354 --SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ ++ +T+ G++ +P IS+++ E + ++ + I L L+G DH +R
Sbjct: 1109 APGGRDVVVYTTISGAVGALVPFISNDDVEFMTTLE--MHIRSLNTSLVGRDHLAYRGYY 1166
Query: 411 NPVR 414
PV+
Sbjct: 1167 APVK 1170
>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1197
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI + D ++ I F Y +L D R ++D +T D+
Sbjct: 970 IVQLHTQGSRIIIADIQESIHFAVYKYLENRLIVFADDVIPRWTTTSTMLDYETVAAGDK 1029
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G+ + C + ++A + P+ A + E + + K+ A +GD S
Sbjct: 1030 FGNFWINRCPLEVSESADED----PSGAQLIHEKSYLFGAAKRL-KMLAHFYIGDTFTSM 1084
Query: 353 ESSQ------TTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
Q I+ + ++GSI IF+P + E+ + + ++A + L+ L+G DH
Sbjct: 1085 HKVQLIAGGRDIIVYTGMMGSIGIFLPFVGREDVDFFQQLEALMRTEDLS--LIGRDHLM 1142
Query: 406 FRSRENPVR 414
+R PV+
Sbjct: 1143 YRGYYVPVK 1151
>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
Length = 1217
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 42/196 (21%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D +D F Y +L D + R + +D +T +D+ G+I ++
Sbjct: 998 NRIIASDVQDSFHFVRYKRQENQLIVFADDTNPRWITASCSLDYNTVAGADKFGNITIIR 1057
Query: 301 CSDRLEDN-------------------ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
+ D+ AS + ++ N +H+GE+ S++K + I
Sbjct: 1058 LPGDVSDDVDEDPTGNKALWDRGLLNGASQKADVMMN--FHLGEMVTSLQKATLI----- 1110
Query: 342 DDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-HPLTAPLL 399
+++ +TL G I + + +S E+++ + ++ + HP PL
Sbjct: 1111 -----------PGGSESLVYTTLSGGIGMLVAFTSHEDHDFFQHLEMYMRTEHP---PLC 1156
Query: 400 GNDHSEFRSRENPVRK 415
G DH FRS PV+
Sbjct: 1157 GRDHLSFRSYYYPVKN 1172
>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
Length = 1215
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 47/212 (22%)
Query: 229 TRFMIMLLTA---HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
+F+ +TA + RI V D +D F Y +L D R + ++D +
Sbjct: 981 NKFLPNFVTAIHVNGNRIMVSDIQDSFHFVRYKRHENQLIVFADDTCPRWLTCSCMLDYN 1040
Query: 286 TAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMG 324
T +D+ G+I V+ RL NA+ + + P +H+G
Sbjct: 1041 TMAGADKFGNICVV----RLPSNATDDVDEDPTGNKALWDRGSLNGASQKADSIANFHVG 1096
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
E+ S++K + I +++ +TL GS+ + +P SS E+++ +
Sbjct: 1097 EMITSLQKATLI----------------PGGSESLVYTTLSGSLGMLVPFSSHEDHDFFQ 1140
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
++ + + L G DH +RS PVR
Sbjct: 1141 HLE--MHMRSEVQSLCGRDHLAYRSYYFPVRN 1170
>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
Length = 1171
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI + D + I+F + + + + D +R + +D DT + D+ G+I V
Sbjct: 950 RILLADSANSIVFAKFDNEENQFIPVADDVVKRNITAWKQLDYDTIIGGDKFGNIFVTRL 1009
Query: 302 SDR------------LEDNASPECNLTP-------NCAYHMGEIAVSIRKGSFIYKLPAD 342
DR L+ A NL C Y++ +I S + GSF
Sbjct: 1010 -DREESKQVDQDWTVLKQAAQNSSNLNSCVFKLQNLCQYYIPDIITSFQLGSF------- 1061
Query: 343 DALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
LG + II + ++G+I + IP +S E EL+ +Q ++ I + G
Sbjct: 1062 -NLG--------GEECIIYTGVMGTIGVLIPLLSKSEIELVHDLQLQIGIWNDGVNVAGK 1112
Query: 402 DHSEFRSRENP 412
+H + RS NP
Sbjct: 1113 NHGKLRSYYNP 1123
>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
Length = 1294
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 26/185 (14%)
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+ RI + D ++ + Y Y I D + L+D DT + D+ G+I++L
Sbjct: 1051 YDRIFLSDVQESVFLYRYSAADNLFLCIADDYLPKWCTTMCLLDYDTVAIGDKMGNISIL 1110
Query: 300 SCSDRLEDNAS------PECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
RL A P L A H ++ GS I CL+ E
Sbjct: 1111 ----RLPPEAGTFIEQDPTGGLLSKEAPHHFQLEACYYVGSVI----------QCLSKVE 1156
Query: 354 SSQTTI---IASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSR 409
+ + TL G+I + IP+ S+ + EL +A++ L + +PL G H +RS
Sbjct: 1157 WTTGDVPLLFYGTLDGAIGVMIPLRSTLDMELFQALE--LQLREYRSPLCGRHHLAYRSY 1214
Query: 410 ENPVR 414
PVR
Sbjct: 1215 FFPVR 1219
>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
Length = 1034
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 807 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 866
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 867 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 922
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 923 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 977
Query: 404 SEFRSRENPVR 414
+RS PV+
Sbjct: 978 LIYRSYYAPVK 988
>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
Length = 1209
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 1152
Query: 404 SEFRSRENPVR 414
+RS PV+
Sbjct: 1153 LIYRSYYAPVK 1163
>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
Length = 1209
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R + ++D +T D+
Sbjct: 982 IVGLQTQGSRIIVSDIRESVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-----HMGEIAVSIRKGSFIYKLPADDA 344
G++ ++ C ++ + A + +L Y H E+ V F +P
Sbjct: 1042 FGNLWLVRCPSKISEQADEDGSGAHLIHEKGYLHGTPHRLELMVHF----FAQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ + L G+I +F+P +S E+ + + ++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDIVVWTGLQGTIGMFVPFVSREDVDFFQLLETQLASQ--QPPLAGRDH 1152
Query: 404 SEFRSRENPVR 414
+R PV+
Sbjct: 1153 LMYRGYYAPVK 1163
>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
Length = 1275
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 164/415 (39%), Gaps = 47/415 (11%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSD---ICCVDPLSGSVLSSFK 61
++L++R L P+++ + E++ L V+ + ++ + + D + L+ +
Sbjct: 852 QKLHIRTVPLREQPRRIAHQPETKTLAVLTMKESDVPGQEEEFFVRLFDNKTFETLAKYP 911
Query: 62 LELGETGKSMELVRV-GHEQV-LVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSD 119
LE E S+ G + + VVGT+ + P E ES++GR++V + + +S
Sbjct: 912 LEPNENDASIISCSFDGDDDIYFVVGTAFAD-----PHSEPESSRGRILVFKVSNTSSSG 966
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
G+ + ++ SSS+ C+ +ET L
Sbjct: 967 GGNAVVNGNDHGDGRASA--------------SSSVLQKSLTLVCE----KETRGAVYNL 1008
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
+ G +LA L + F G +N + + + + +
Sbjct: 1009 ---NAFCGKLLAGINSLVKLF---------NWGVSKENKRELVHECSHMGHIIALKVETK 1056
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
I VGD I Y ++ ++E++ D S + ++D +T + ++ ++ +
Sbjct: 1057 DNLIVVGDLMKSITLLQYQRESGRIEEVAHDFSSNWMTAVEILDDNTYLGAESSYNLFTV 1116
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
+ D L A+H+G+ R+GS + ++P L D +S S +T
Sbjct: 1117 Q-RNADADTEDKRGTLELCGAFHLGDSVNRFRRGSLVMRMP---DLSDDTSSL-SEISTW 1171
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ T+ G + + + ++ LL VQ A+ + + HS+FRS N R
Sbjct: 1172 LFGTISGGLGVVATLPKRDFMLLNKVQE--AMQKVVTGVGNFSHSDFRSFHNVQR 1224
>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
Length = 1210
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 1152
Query: 404 SEFRSRENPVR 414
+RS PV+
Sbjct: 1153 LIYRSYYAPVK 1163
>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1270
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 1152
Query: 404 SEFRSRENPVR 414
+RS PV+
Sbjct: 1153 LIYRSYYAPVK 1163
>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
Length = 1216
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 37/193 (19%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV-- 298
RI VGD + F ++ L + + R + L+D +T D+ G+ +
Sbjct: 996 NRIFVGDITESFHFVKFNSSENSLTIFADNTTPRWLTASALVDHNTIAGGDKFGNFFISR 1055
Query: 299 --LSCSDRLED---------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
SD LED N +P+ T +++G + SI K S I P+
Sbjct: 1056 LPSDVSDELEDSSTGKEKWIWERGLLNGAPQ-KATEIVKFYVGSMITSIYKTSLIAGGPS 1114
Query: 342 DDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN 401
+I +T+ G++ +F P +S++ ++ Q + + PL G
Sbjct: 1115 ----------------ILIYTTITGAVGVFFPFTSKK-DIEFFTQLEMHLREKNPPLCGR 1157
Query: 402 DHSEFRSRENPVR 414
DH +RS PV+
Sbjct: 1158 DHLAYRSYYFPVK 1170
>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
Length = 1256
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 43/202 (21%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
+RI VGD F Y + D +R + V +D DT + D+ G+I V
Sbjct: 1026 SRIVVGDSSMSTTFVKYDSTENQFIPFADDIMKRQITALVTLDYDTIIGGDKFGNIFVSR 1085
Query: 301 CSDRLEDNASPECN---------------LTPNCAYHMGEIAVSIRKGSFIYKLPADDAL 345
+ + + + + L C +++ +I S KGS +
Sbjct: 1086 VPETISQQSDKDWSLLRYQESYLNGSGSRLKNICEFYLQDIPTSFTKGSLVM-------- 1137
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIH-----------P 393
+ +II + + G++ + +P+S+E E + L +Q L +
Sbjct: 1138 --------GGKESIIYTGIQGTLGLLLPLSTENEVKFLGDLQLLLRKYFDYNFDDFDKDK 1189
Query: 394 LTAPLLGNDHSEFRSRENPVRK 415
LLG DH +FRS NPV+
Sbjct: 1190 NGYNLLGKDHLKFRSYYNPVKN 1211
>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
Length = 1218
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 23/252 (9%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNP-QRVRRFAVGRTRF 231
E +L + T + + A+C + R L GN ++ + ++ R AV
Sbjct: 934 EGTKLEFVHRTQFDSPIYALCKFNGRLALG-VGNELFIYDMGMKHLLRKARGTAVPN--- 989
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I +T+ R+ D + + + Y +L D QR L+D +T +D
Sbjct: 990 LITHITSVGNRLICADVSESVTYVVYKPAFNRLIPFVDDTIQRWTTATALVDYETVAGAD 1049
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA--------VSIRKGSFIYKLPADD 343
+ G++ V+ C + S E + Y M E + + +R F +P
Sbjct: 1050 KFGNLWVVRCPE----ATSTEADEDGAGGYIMNERSYLGGAPYRLELRSHFFANDIPTSL 1105
Query: 344 ALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGND 402
+A I S L G++ + +P +S E+ E A+++++ PL G D
Sbjct: 1106 QRTSLVAG---GAEVIFWSGLQGTLGMLVPFVSREDVEFFTALESQMRQE--DPPLAGRD 1160
Query: 403 HSEFRSRENPVR 414
H +RS PV+
Sbjct: 1161 HLMYRSYYVPVK 1172
>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
Length = 1273
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 242 RIAVGDCRDGILFYSY-HEDARKLE-QIYCDP-SQRLVADCVLMDVDTAVVSDRKGSIAV 298
R V D + F Y ED ++ I+ D + R V + +D DT VSD+ G+ A
Sbjct: 1048 RFFVTDACESAFFVKYVREDDQECSMHIFADDIAPRYVTSMLPLDRDTVAVSDKFGNFAA 1107
Query: 299 L----SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADD---ALGDCLAS 351
L SD +E + S + + +G + + K + D +L C
Sbjct: 1108 LRLPKDVSDEIESDISGGKHAALTSSAALGALNGANNKLQACAQFHVGDVICSLTKCALQ 1167
Query: 352 FESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
S+ I+ +TL G++ F+P +S +E + ++ L I P+LGN+H FRS
Sbjct: 1168 TGGSEV-IVYATLGGALGAFVPFASKDEADFCTHLEMHLRIE--APPVLGNEHGAFRSSY 1224
Query: 411 NPVR 414
PV+
Sbjct: 1225 FPVK 1228
>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666 SS1]
Length = 1213
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD ++ I + Y KL D R V ++D T DR
Sbjct: 985 IISLNTQGSRIIVGDMQESIAYAVYKAPENKLLVFADDTQARWVTCSTMVDYTTVAAGDR 1044
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIR 331
G+I + +RL+ S + + P A +H+G++ SI
Sbjct: 1045 FGNIFI----NRLDSKVSDQVDDDPTGAGILHEKGILMGAPHKTAMLAHFHVGDLVTSIH 1100
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K S + + ++ + L G+I + +P +S E+ + + ++ +
Sbjct: 1101 KVSLV----------------AGGREVLLYTGLHGTIGMLVPLVSKEDVDFISTLEQHIR 1144
Query: 391 IHPLTAPLLGNDHSEFRSRENPVR 414
+ L+G DH +R PV+
Sbjct: 1145 TEQTS--LVGRDHLAWRGYYVPVK 1166
>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
[Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
nidulans FGSC A4]
Length = 1209
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ ++ C + + A E +L + Y G E+ + + F +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEEGSGAHLIHDRGYLQGTPNRLELMIHV----FTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ + G+I I +P +S E+ + ++++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGILVPFVSREDVDFFQSLEMQLASQ--CPPLAGRDH 1152
Query: 404 SEFRSRENPVR 414
+RS PV+
Sbjct: 1153 LIYRSYYAPVK 1163
>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
Length = 1092
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 228 RTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTA 287
R +++ L I GD I +Y + ++E+I D + + ++D DT
Sbjct: 868 RGHILVLYLQTRGDFIVAGDLMRSISLLTYKQVDGQIEEIARDFNANWMTAVDILDDDTF 927
Query: 288 VVSDRKGSIAVLSCSDRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
+ ++ G + + + + E L YH+G++ ++GS + +
Sbjct: 928 LGAE--GYFNLFTVRKNTDATSDEERARLEVVGEYHLGDMVNRFQRGSLVLR-------- 977
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+S + TII T+ G I + +S EEYE L VQ A++ + + G H ++
Sbjct: 978 ---SSDTPTTDTIIFGTVNGMIGVIAVLSKEEYEFLLKVQD--ALNFVIKGVGGLRHEDW 1032
Query: 407 RSREN 411
RS EN
Sbjct: 1033 RSFEN 1037
>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
Length = 1088
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
IAVGD I Y + +E+ D + +A +++ D + +D +I + +
Sbjct: 880 IAVGDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILNDDIYLGTDNCFNIFTVKKN 939
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + KLP D +G T+I
Sbjct: 940 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLP-DSDIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q L + + G H ++RS N R
Sbjct: 988 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKR 1039
>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
Length = 1226
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 18/191 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ ++ C + + A E +L + Y G E+ + + F +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEEGSGAHLIHDRGYLQGTPNRLELMIHV----FTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ + G+I I +P +S E+ + ++++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGILVPFVSREDVDFFQSLEMQLASQ--CPPLAGRDH 1152
Query: 404 SEFRSRENPVR 414
+RS PV+
Sbjct: 1153 LIYRSYYAPVK 1163
>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
Length = 967
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ ++ Y +L D R + ++D +T D
Sbjct: 739 LIVGLRTQGSRIIVSDVQESVVMVVYKFQENRLIPFVDDTIARWTSCSTMVDYETVAGGD 798
Query: 292 RKGSIAVLSCSDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRKGS 334
+ G++ +L C + + A E + LT ++ +I +SI+K +
Sbjct: 799 KFGNLWLLRCPAKASEEADEEGSGAHLLHERQYLQGAPHRLTLMAHFYSQDIPMSIQKTN 858
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ P DCL + + L G++ I IP + E+ + + ++ +
Sbjct: 859 LVVGGP------DCL----------LWAGLQGTLGILIPFVGREDVDFFQTLEQHMRNE- 901
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
APL G DH +RS PV+
Sbjct: 902 -DAPLAGRDHLIYRSYYVPVK 921
>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1168
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 130/339 (38%), Gaps = 67/339 (19%)
Query: 103 TKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDA 162
+K ++ ++ N SM+ S +S+ +VG T Q + L +S D +
Sbjct: 867 SKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPASHLVVGVCTNQ---TILPNSYDKS 923
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
K+ + L+L + T + + + D+ +AS GN +R
Sbjct: 924 YLYTFKIGKK---HLQLVHKTELDHIPQVLENFQDKLLVAS-GN-------------HIR 966
Query: 223 RFAVGRTRFM------------IMLLTAHFTRIAVGDC-RDGILFYSYHEDARKLEQIYC 269
+ +G+ + + I + RI + D + I+F + E +
Sbjct: 967 LYDIGQKQLLKKSTTIIDFSTNINKIIPQTNRIIICDSHKSSIVFAKFDESQNQFVPFAD 1026
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP-------NCAY- 321
D +R + + +D+DT + D+ G+I V + + A + + +C Y
Sbjct: 1027 DVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTILKTQDGILNSCPYK 1086
Query: 322 -------HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP- 373
H+G+I S G LA ES +I + L G+I + IP
Sbjct: 1087 LQNLIEFHIGDIITSFNLGCL------------NLAGTES----VIYTGLQGTIGLLIPL 1130
Query: 374 ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+S E ELL +Q L + L+G DH + RS NP
Sbjct: 1131 VSKSEVELLFNLQ--LYMQQSQNNLVGKDHLKLRSYYNP 1167
>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
Length = 1206
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 36/200 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D + G+ Y + KL D R ++D ++ D+
Sbjct: 979 IVSLNTQGSRIVVSDVQQGVTLVVYKSASNKLIPFVDDSIARWSTCTTMVDYESVAGGDK 1038
Query: 293 KGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGSF 335
G++ ++ + + A + L C + +I SI K
Sbjct: 1039 FGNMFIVRSPAKASEEADEDAAGLHLVNARDYLHGTQHRLELMCHFFTQDILTSINKTGL 1098
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + ++++ L
Sbjct: 1099 VV----------------GGQDVLLWSGIMGTIGVFIPFVSREDTDFFQSLEQHLRTE-- 1140
Query: 395 TAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1141 DGPLAGRDHLMYRSYYAPVK 1160
>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
Length = 991
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 32/195 (16%)
Query: 225 AVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
A+ +I ++ RI VGD + +F + E++ I D R + +D
Sbjct: 772 AIKHINKIIRIVYQGKDRIVVGDSNNSTIFCKFIENS--FVPISDDTMNRQITSLSTLDY 829
Query: 285 DTAVVSDRKGSIAV--------LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
DT + D+ G++ V + + +S C + + +I +S KG+ +
Sbjct: 830 DTVIGGDKFGNVFVNRIKYDNTYFVEESYLNGSSGRCQTL--AEFFLNDIPMSFTKGTLV 887
Query: 337 YKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTA 396
P II + L G+I I +PIS +++ L + L+I
Sbjct: 888 LGGPE----------------VIIYAGLQGTIGILLPISESDFKFL----SNLSIELNKD 927
Query: 397 PLLGNDHSEFRSREN 411
LLG DH +FR N
Sbjct: 928 LLLGRDHMKFRGYYN 942
>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium dendrobatidis
JAM81]
Length = 1213
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L RI +GD ++ + + Y ++ D R V ++D DT V D+
Sbjct: 986 IVTLHTQGNRIILGDAQESVHYAMYRAFDNRIVIFADDTIPRWVTATCMVDYDTVVGGDK 1045
Query: 293 KGSIAVLSCSDRLEDNASP--ECNLTPNCA-YHMGEIAVSIRKGSFIYKLPADDALGDCL 349
G+I V +RL S + + T N A + G + + K AD LG+ L
Sbjct: 1046 MGNIFV----NRLSAEVSKGIDEDTTGNQAIFDRGYLQGAPHK----VHHEADFFLGETL 1097
Query: 350 ASFESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGND 402
S + + ++ +TL+G I + IP IS ++ + + ++ + + PL G D
Sbjct: 1098 TSLTKTSLVPGGREILLYTTLMGGIGLLIPFISKDDVDFFQTLE--MTMRSECPPLCGRD 1155
Query: 403 HSEFRSRENPV 413
H +RS PV
Sbjct: 1156 HLAYRSFYTPV 1166
>gi|308504990|ref|XP_003114678.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
gi|308258860|gb|EFP02813.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
Length = 270
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ + F Y + +L D + R V+ ++D T V+D+ G++AV+
Sbjct: 36 RIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHTVAVADKFGNLAVVRL 95
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS------ 355
+R+ ++ + ++ + + G + + +K +L A+ +GD + S + +
Sbjct: 96 PERVNEDVQDDPTVSKS-VWDRGWLNGASQK----VELVANFFIGDTITSLQKTSLMPGA 150
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ +T+ G+I + S++ E+ + + PL G DH +RS P +
Sbjct: 151 NEALVYTTIGGAIGCLVSFMSKD-EVDFFTNLEMHVRSEYPPLCGRDHLAYRSYYAPCK 208
>gi|330805789|ref|XP_003290860.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
gi|325078985|gb|EGC32608.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
Length = 1327
Score = 45.8 bits (107), Expect = 0.041, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 348 CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
CL + + + II +LLGS+++F +S EY++L +Q L + P+ NDH+ +R
Sbjct: 1207 CLKLLQLNNSKIITCSLLGSVILFGKLSRVEYKVLLTIQNSLKNDKSSKPITNNDHNLYR 1266
Query: 408 S 408
S
Sbjct: 1267 S 1267
>gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
Length = 270
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 14/173 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 62 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE--NNFNLLTVK 119
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 120 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 170
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q+ ++ + + G H ++RS N R
Sbjct: 171 GTVNGVIGVIASLPQEQYTFLEKLQS--SLRKVIKGVGGLSHEQWRSFNNEKR 221
>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
Length = 1090
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + ++ ++D + + ++ +I V
Sbjct: 882 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKN 941
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE +R GS + +LP D +G T+I
Sbjct: 942 SDAATDEERGRLEVVGE--YHLGEFVNRLRHGSLVMRLP-DSEMGQI--------PTVIF 990
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSREN 411
T+ G I I + E+Y LE +Q+ L +GN H ++RS N
Sbjct: 991 GTINGVIGIIASLPHEQYVFLEKLQSTLVKF---IKGVGNLSHEQWRSFHN 1038
>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
TFB-10046 SS5]
Length = 1244
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 41/167 (24%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I L+ RI GD + I F Y +L D QR V++D +T V D+
Sbjct: 964 ITSLSTQGARIIAGDAQQSIFFCVYKATENRLLVFADDSQQRWTTSQVMLDYNTVVAGDK 1023
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIR 331
G++ V +RL D+ S + P C +H+G+I +S++
Sbjct: 1024 FGNVFV----NRLSDHVSNLVDDDPTGTGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQ 1079
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+ S + + I+ L G+I + +P +S+E
Sbjct: 1080 RTSLV----------------PGGREVIVYFGLHGTIGMLVPFASKE 1110
>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
Length = 1089
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + ++ ++D + + ++ +I V
Sbjct: 881 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE +R GS + +LP D +G T+I
Sbjct: 941 SDAATDEERGRLEVV--GEYHLGEFVNRLRHGSLVMRLP-DSEMGQI--------PTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSREN 411
T+ G I I + E+Y LE +Q+ L +GN H ++RS N
Sbjct: 990 GTINGVIGIIASLPHEQYVFLEKLQSTLVKF---IKGVGNLSHEQWRSFHN 1037
>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
Length = 1090
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + ++ ++D + + ++ +I V
Sbjct: 882 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKN 941
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE R GS + +LP D +G T+I
Sbjct: 942 SDAATDEERGRLEVVGE--YHLGEFGNRFRHGSLVMRLP-DSEMGQI--------PTVIF 990
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSREN 411
T+ G I I + E+Y LE +Q+ L +GN H ++RS N
Sbjct: 991 GTINGVIGIIASLPHEQYVFLEKLQSTLVKF---IKGVGNLSHEQWRSFHN 1038
>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 45/259 (17%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 946 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKRRLLRKCE 991
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VGD ++ + Y D +L D R + +D D
Sbjct: 992 NKSFPISIVSIHAYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 1051
Query: 286 TAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPAD 342
T +D+ G+I RL + S E P + G++ ++ K I +
Sbjct: 1052 TMAGADKFGNIFFA----RLPQDVSDEVEEDPTSGKIKWEQGKLNGALNKVEEIVQF--- 1104
Query: 343 DALGDCLASFESSQTT------IIASTLLGSI-VIFIPISSEEYELLEAVQARLAIHPLT 395
+GD + S + + I+ T++G + + S ++ + ++ + +
Sbjct: 1105 -HVGDVITSLQKAALVPGGGECIVYGTVMGCVGALHAFTSRDDVDFFSHLE--MHMRQDN 1161
Query: 396 APLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1162 PPLCGRDHMAYRSAYFPVK 1180
>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1209
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 26/195 (13%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R + ++D +T D+
Sbjct: 982 IVGLQTQGSRIIVSDVRESVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDAL------G 346
G++ ++ C ++ + A + G A I + +++ P L
Sbjct: 1042 FGNLWLVRCPSKVSEQADED-----------GSGAHLIHEKGYLHGTPHRLELMVHFYAQ 1090
Query: 347 DCLASFESSQTT------IIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
D S +Q ++ + G+I +F+P +S E+ + + ++ +LA PL
Sbjct: 1091 DIPTSLHKTQLVAGGRDIVVWTGFQGTIGMFVPFASREDVDFFQLLETQLASQ--QPPLA 1148
Query: 400 GNDHSEFRSRENPVR 414
G DH +R PV+
Sbjct: 1149 GRDHLMYRGYYAPVK 1163
>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
Length = 1143
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 190 LAICPYLDRYFLASAGNA--FYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF---TRIA 244
LA+C Y + +A G+ Y G Q +R+ + ++ + L AHF R+A
Sbjct: 880 LALCAY-NGLLVAGIGSQVRLYALGLK----QVLRKAQIELSKRVTCL--AHFAGSNRVA 932
Query: 245 VGDCRDGILFYSYHED--ARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
VGD R + E+ + + CD R V +D +T + DR G +L
Sbjct: 933 VGDIRQSVTVCVVLEEDSGHVIYPLVCDKISRQVTCLFFVDYETVALGDRFGGFTML--- 989
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIR-KGSFIYKLPADDALGDCLASFESSQTTIIA 361
R+ AS + N A H+ ++ ++ F + A + D + ++
Sbjct: 990 -RIPSEASKLADEDHN-AVHLRQLEPTLNGPAHFRFDHVASFHIEDVPVAIHMYNDYLVV 1047
Query: 362 STLLGSIVIFIP-ISSEEYELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
LLG++ F+P +S ++ L+ ++ + A P L+G DH FR PV++
Sbjct: 1048 CGLLGTVSAFVPVVSPKQSRDLKTIEKFVCASDP---GLMGRDHGRFRGYYVPVKE 1100
>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
Length = 727
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 519 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 576
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 577 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 627
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q+ L + + G H ++RS N R
Sbjct: 628 GTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKR 678
>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
Length = 1108
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
+ VGD I ++ E+ LE D ++ ++D DT + ++ ++ +
Sbjct: 896 VVVGDLMKSIQLLAWGEEEGALELRARDFHPNWMSAVTVLDDDTYMGAENSYNLFTVR-- 953
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
R D A+ E L YH+GE + GS + +LP D L S T++
Sbjct: 954 -RNADAATDEERSRLETVGRYHLGEFVNRFQPGSLVMRLP-DSEL--------SQIPTVL 1003
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + +Y+LLE++Q A+ + + G DH+++R+ N
Sbjct: 1004 FGTINGVIGVVASLPHAQYQLLESLQE--AMRKVVKGVGGFDHAQWRAFSN 1052
>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
Length = 1202
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 36/197 (18%)
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L +RI V D ++ + + Y +L D R ++D +T DR G+
Sbjct: 978 LQTQGSRIIVSDVQESVTYVVYKYQDNRLIPFADDMIPRFTTCTTMVDYETVAGGDRFGN 1037
Query: 296 IAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSFIYK 338
++ C + D + + PN C ++ +I S++K +
Sbjct: 1038 FWIVRCPQKASDESDEDPAGGHLIHERSYLQGAPNRLNLMCHFYPQDIPTSVQKAQLV-- 1095
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAP 397
+ T++ + L G+I + +P +S E+ + + ++ + AP
Sbjct: 1096 --------------TGGRDTLVWTGLQGTIGLMVPFVSREDVDFFQTLEQHMRTE--DAP 1139
Query: 398 LLGNDHSEFRSRENPVR 414
+ G DH +RS PV+
Sbjct: 1140 IAGRDHLIYRSYYVPVK 1156
>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
Length = 1101
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 43/175 (24%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 946 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1001
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1002 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1057
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHP 393
+++ +TL G I I +P +S E+++ + V+ L + HP
Sbjct: 1058 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP 1100
>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1123
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 19/153 (12%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y +E+I D V ++D D + + S + +C
Sbjct: 972 IIVGDLMRSISLLMYKSGTSSIEEIAQDTCPNWVTAVDMLDDDVFIGGE--SSFNIFTCR 1029
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
LE + E L +H+GE R GS + KLP + + I
Sbjct: 1030 RNLEASTDEERKRLEVVGEFHVGEFINQFRAGSLVMKLP------------DEQEQPIQP 1077
Query: 362 STLLGS----IVIFIPISSEEYELLEAVQARLA 390
STL G+ I + ++ +YE L+ VQA +A
Sbjct: 1078 STLFGTGNGVIGVIARLTRSQYEFLQLVQAAMA 1110
>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
Length = 1217
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 28/196 (14%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSISRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDAL------G 346
G++ ++ C ++ + A + G A I + +++ P L
Sbjct: 1042 FGNLWLVRCPKKVSEQADED-----------GSGAHLIHERGYLHGTPNRLELMIHVYTQ 1090
Query: 347 DCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLA-IHPLTAPL 398
D S +Q ++ + G+I + +P +S E+ + + ++ +LA HP PL
Sbjct: 1091 DIPTSLHKTQLVAGGRDILVWTGFHGTIGMLVPFVSREDVDFFQNLEMQLASQHP---PL 1147
Query: 399 LGNDHSEFRSRENPVR 414
G DH +RS PV+
Sbjct: 1148 AGRDHLIYRSYYAPVK 1163
>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1209
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ +L C + + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNLWLLRCPKKTSEEADEDGSGAHLIHERGYLQGTPNRLELMIHV----YTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI-HPLTAPLLGND 402
+A + ++ + G+I + +P I E+ + + ++ +LA HP PL G D
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHP---PLAGRD 1151
Query: 403 HSEFRSRENPVR 414
H +RS PV+
Sbjct: 1152 HLIYRSYYAPVK 1163
>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
Length = 1219
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ +L C + + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNLWLLRCPKKTSEEADEDGSGAHLIHERGYLQGTPNRLELMIHV----YTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI-HPLTAPLLGND 402
+A + ++ + G+I + +P I E+ + + ++ +LA HP PL G D
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHP---PLAGRD 1151
Query: 403 HSEFRSRENPVR 414
H +RS PV+
Sbjct: 1152 HLIYRSYYAPVK 1163
>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
Length = 1208
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 31/257 (12%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRV---RRFAVGR 228
T+ QL L + T + AI + R LA G A + R + FA G
Sbjct: 923 TQDSQLELLHKTDIDDVPYAIHAFKGR-LLAGVGKALRLYDLGKKRLLRKCENKSFAAG- 980
Query: 229 TRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV 288
I+ L +RI VGD ++ + F Y +L D R +D DT
Sbjct: 981 ----IVNLNVVGSRIYVGDMQESVSFAVYKAPENRLLVFADDIMSRWTTTATPVDYDTVA 1036
Query: 289 VSDRKGSIAVL----SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
D+ G+I + S S+ ++++ S L YH G S KL A
Sbjct: 1037 GGDKFGNIFITRVDKSTSEWVDEDESGGGLLHARGLYH-GAPNRS--------KLLAHFY 1087
Query: 345 LGDCLASFESSQTT------IIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAP 397
+GD + S SQ + ++ + L G++ + IP +S ++ E + ++ L + +
Sbjct: 1088 VGDIVTSITKSQLSAGGRDVLVYTCLHGTVGMIIPFASKDDIEFMSTLE--LHMRQESPS 1145
Query: 398 LLGNDHSEFRSRENPVR 414
L+G DH FRS P +
Sbjct: 1146 LVGRDHLGFRSYYIPCK 1162
>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
Length = 1209
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ +L C + + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNLWLLRCPKKTSEEADEDGSGAHLIHERGYLQGTPNRLELMIHV----YTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI-HPLTAPLLGND 402
+A + ++ + G+I + +P I E+ + + ++ +LA HP PL G D
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHP---PLAGRD 1151
Query: 403 HSEFRSRENPVR 414
H +RS PV+
Sbjct: 1152 HLIYRSYYAPVK 1163
>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
Length = 1209
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
MI+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 981 MIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDIIARWTTCTTMVDYETVAGGD 1040
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R I+ P D
Sbjct: 1041 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMIHFYPQD-----I 1092
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G+I + IP +S E+ + ++++ +L T P+ G
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTIGMLIPFVSREDVDFFQSLEMQLTSQ--TPPIAGR 1150
Query: 402 DHSEFRSRENPVR 414
DH +RS P +
Sbjct: 1151 DHLIYRSYYAPAK 1163
>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 108/267 (40%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T + LA+C + + LA G+ +R + +G+ + +
Sbjct: 933 LELLHKTQVDDVPLALCQFQGK-LLAGVGSV-------------LRLYDLGKRKLLRKCE 978
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 979 NKLFPNTITSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFD 1038
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1039 TMAGADKFGNIYFVRLAQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVT 1098
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I P+ G+C +I T++GS+ + +S ++ + ++
Sbjct: 1099 CLQKASLI---PSG---GEC----------VIYGTVMGSLGALLAFTSRDDVDFFSHLE- 1141
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ + PL G DH +RS PV+
Sbjct: 1142 -MHMRQENPPLCGRDHMAYRSAYFPVK 1167
>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
Length = 1288
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 23/232 (9%)
Query: 168 KLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDN--PQRVRRFA 225
K ++L + T + A+CP+ D+ L NA + G + +
Sbjct: 947 KAANNRRFELLALHDTVAGSTIHAMCPFHDK-LLVPLANAVVLYGLGKKQLLKKSISYLP 1005
Query: 226 VGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
T+ ++ L + TR+AVGD + + + E + + D ++R V +D
Sbjct: 1006 TSITK-IVALDQWNGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDEC 1064
Query: 286 TAVVSDRKGSIAVLSCS---DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
T + DR G+I +L DRL LT N I +IR+ F ++L
Sbjct: 1065 TVIGGDRFGNIWLLRLPLEYDRLIKEGVDSYLLTLNTG-----IPSNIRECVFKWQLLNH 1119
Query: 343 DALGDCLASFE-------SSQTTIIASTLLGSIVIFIPISS----EEYELLE 383
+ D SF + + +I+ + L G+I IP+ + E ++LLE
Sbjct: 1120 FYINDIPMSFHLIASPQMADRASILYAGLQGTIGYLIPLITRREIEFFDLLE 1171
>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName: Full=UV-damaged
DNA-binding protein 1b; Short=DDB1b
gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
Length = 1088
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
IAVGD I Y + +E+ D + + +++ D + +D +I + +
Sbjct: 880 IAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKN 939
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + KLP D +G T+I
Sbjct: 940 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLP-DSDIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q L + + G H ++RS N R
Sbjct: 988 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKR 1039
>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
Length = 1102
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
IAVGD I Y + +E+ D + + +++ D + +D +I + +
Sbjct: 894 IAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKN 953
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + KLP D T+I
Sbjct: 954 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDI---------GQIPTVI 1001
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q L + + G H ++RS N R
Sbjct: 1002 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKR 1053
>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + +A ++D D + +D ++ + +
Sbjct: 880 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILDDDIYLGADNCFNLFTVKKN 939
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + +LP D +G T+I
Sbjct: 940 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q L + + G H ++RS N R
Sbjct: 988 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKR 1039
>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
TFB-10046 SS5]
Length = 1214
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 41/167 (24%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I L+ RI GD + I F Y +L D QR +++D +T V D+
Sbjct: 986 ITSLSTQGARIIAGDAQQSIFFCVYKAAENRLLVFADDSQQRWTTSQLMLDYNTVVAGDK 1045
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIR 331
G++ V +RL D+ S + P C +H+G+I +S++
Sbjct: 1046 FGNVFV----NRLSDHVSNLVDDDPTGAGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQ 1101
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+ S + + I+ L G+I + +P +S+E
Sbjct: 1102 RTSLV----------------PGGREVIVYFGLHGTIGMLVPFASKE 1132
>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1067
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 859 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 916
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 917 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 967
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q+ L + + G H ++RS N R
Sbjct: 968 GTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKR 1018
>gi|260819268|ref|XP_002604959.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
gi|229290288|gb|EEN60969.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
Length = 163
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 21/98 (21%)
Query: 319 CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-E 377
C YH+GE+ S++K + I +++ +T+ G + I +P +S E
Sbjct: 39 CNYHVGEVVTSVQKATLI----------------PGGSESLVYTTISGGVGILVPFTSHE 82
Query: 378 EYELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVR 414
+++ + ++ + + HP PL G DH FRS PV+
Sbjct: 83 DHDFFQHLEMHIRSEHP---PLCGRDHLSFRSYYYPVK 117
>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
Length = 1144
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 221 VRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+R + +G+ R + I L +RI VGD ++ F Y + +
Sbjct: 895 LRLYDMGKKRMLRKCEYRRLPTRIATLHVSGSRIYVGDGQESTFFMRYKKGDNQFYIFAD 954
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVS 329
D R V + +D DT +DR G++ V RL S + P + E +
Sbjct: 955 DIVPRHVTAALHLDYDTLAGADRFGNVFV----SRLPQEVSAQVEDDPTGGKYATETGLL 1010
Query: 330 IRKGSFIYKLPADDA--LGDCLASFESS------QTTIIASTLLGSIVIFIPISSEE--- 378
G KL ++ +G+ + + + + + I+ T+ G+I + P +S+E
Sbjct: 1011 ---GGAPNKLRTINSFHVGETVTALQRAVLQPGGRELIVYGTINGAIGVLYPFTSKEDCD 1067
Query: 379 -YELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ LE + R HP PLLG DH +RS PV+
Sbjct: 1068 FFQHLE-MHMRQE-HP---PLLGRDHLAYRSFYFPVK 1099
>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName: Full=UV-damaged
DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1088
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 880 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 937
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 938 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 988
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q+ L + + G H ++RS N R
Sbjct: 989 GTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKR 1039
>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
Length = 1073
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 133/350 (38%), Gaps = 61/350 (17%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE 66
N + L TP+K ++H +S + ++ T+ N+ T ++ +++S LG
Sbjct: 742 FNQISYPLQYTPRKFVFHPDSNITYIIETDHNSYTDDVKNTHKRQMAEKMIAS---ALGG 798
Query: 67 TGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFC 126
T + M L + L S + AI + +A ++ C + + S C + F
Sbjct: 799 TPEDMALAKESAAAFL----SENLPEAIFGAPKAGPGMWASLLRCFKPLDGSTCQIIRFP 854
Query: 127 SKAGSSSQRTSPFREIVGYATEQLSSSSLCSS--PDDASCDGIKLEETETW----QLRLA 180
+ + F + + EQ +L + SC G L+ W +L
Sbjct: 855 QNEAAHALT---FVKFNNHPAEQFLVVALVKDLILNPRSCSGGCLKTYRIWNNGERLEFL 911
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
+ T A+C + R L GN R+R + +G+ + + H
Sbjct: 912 HETPVDDFPAALCAFQGR-LLVGVGN-------------RLRIYDLGKKKLLKKCENKHI 957
Query: 241 -----------TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAV 288
+RI V D ++ + + Y + I+ D + R + ++D T
Sbjct: 958 PTLINGIYSVGSRIIVTDVQESVHWVRYRPRSDSQLVIFADDTNPRWIIHLAVLDASTVA 1017
Query: 289 VSDRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNC 319
VSD+ G++ +L + D +ED+ AS +C++ PNC
Sbjct: 1018 VSDKFGNVTILRLPPNVIDDIEDDPSGNRALWDRGFLGGASQKCDVCPNC 1067
>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
Length = 1212
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
MI+ L +RI V D ++ I Y +L D R + ++D +T D
Sbjct: 984 MIVGLQTQGSRIIVSDVQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEI-AVSIRKGSFIYKLPADDALGD 347
+ G++ +L C + + A E +L Y G +++ +F +P +
Sbjct: 1044 KFGNLWLLRCPAKASEEADEEGSGAHLLHERQYLAGAPHRLTLMAHNFSQDIPMSIQKTN 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+A + ++ S L G++ I IP +S E+ + + ++ L PL G DH +
Sbjct: 1104 LVAG---GRDCLLWSGLQGTLGILIPFVSREDVDFFQTLEQHLRSE--DPPLAGRDHLIY 1158
Query: 407 RSRENPVR 414
RS PV+
Sbjct: 1159 RSYYVPVK 1166
>gi|255712143|ref|XP_002552354.1| KLTH0C02904p [Lachancea thermotolerans]
gi|238933733|emb|CAR21916.1| KLTH0C02904p [Lachancea thermotolerans CBS 6340]
Length = 1288
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL- 299
+R+AVGD + + + Y + A + I D ++R V +D T V DR G+I VL
Sbjct: 1017 SRVAVGDIHESVTLFLYDKRADRFISIADDITKRHVTALEFLDRSTVVGGDRFGNIWVLR 1076
Query: 300 --SCSDRLEDNASP------ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADD---ALGDC 348
S +RL + P N+ + A ++ E K + A+D +L
Sbjct: 1077 LPSIHERLVSDEFPFFLSKFHNNVNNSIAKNIMECPF---KWDLVNHFYANDIPVSLNVV 1133
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
S + +I+ L GS+ +P+++ +E E LE +Q L+
Sbjct: 1134 KNMHSSDKVSILYLGLQGSVGCLLPLATKKEAEFLEKLQGGLS 1176
>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
Length = 1179
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 31/188 (16%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI + D + +F S++ + + + D +QR + ++D T V DR G+I+VL C
Sbjct: 962 RIVISDMKQSSMFLSFNAEENRFISLCDDITQRHITCSKMLDYSTVVTGDRFGTISVLRC 1021
Query: 302 SDRLE----DNASPECNLTPNC--------AYHMGEIAVSIRKGSFIYKLPADDALGDCL 349
+++ D + + C +Y++ ++ S+ +GS
Sbjct: 1022 PEKVNKDHLDYIEAKSKMIGECPFKLKQLASYYVQDVVTSLSRGSLTV------------ 1069
Query: 350 ASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAP--LLGNDHSEF 406
+ +II + L G+I I PI + + + +++ L L + L G H ++
Sbjct: 1070 ----GGKQSIIYTGLQGTIGILSPIQTPSDIDFFVSLEDSLRQELLKSKHLLTGRSHLKY 1125
Query: 407 RSRENPVR 414
R P +
Sbjct: 1126 RGYYVPAQ 1133
>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
98AG31]
Length = 1210
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 25/215 (11%)
Query: 219 QRVRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267
+ +R F +G+ + + I L+ R+ VGD +D I + Y +L
Sbjct: 958 KALRIFDLGKKKLLRKVENKTFSAAISSLSTQGPRLLVGDAQDSISYAVYKPAENRLLVF 1017
Query: 268 YCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA 327
D S R ++D DT DR G++ V +R+ S E + P A M E
Sbjct: 1018 ADDISPRWTTCATMVDYDTCAGGDRFGNVWV----NRIPKTVSDEVDDDPTGAGIMHEKG 1073
Query: 328 VSIRKGSFIYKLPADDALGDCLASFESS------QTTIIASTLLGSIVIFIP-ISSEEYE 380
+ + L L D S E + + ++ + L G++ I IP +S E+ +
Sbjct: 1074 YLMGAPHKVKNL-VHFHLNDIPTSMEKTSLVPGGREVLLYTGLQGTVGILIPFLSKEDVD 1132
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVRK 415
+ ++ + + L+G DH +R PV+
Sbjct: 1133 FFQTLE--MHMRSELPSLVGRDHLAYRGYYFPVKN 1165
>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
Length = 1288
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 23/232 (9%)
Query: 168 KLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDN--PQRVRRFA 225
K ++L + T + A+CP+ D+ L NA + G + +
Sbjct: 947 KAANNRRFELLALHDTVAGSTIHAMCPFHDK-LLVPLANAVVLYGLGKKQLLKKSISYLP 1005
Query: 226 VGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
T+ ++ L + TR+AVGD + + + E + + D ++R V +D
Sbjct: 1006 TSITK-IVALDQWNGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDEC 1064
Query: 286 TAVVSDRKGSIAVLSCS---DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
T + DR G+I +L DRL LT N I +IR+ F + L
Sbjct: 1065 TVIGGDRFGNIWLLRLPLEYDRLIKEGVDSYLLTLNTG-----IPSNIRECVFKWHLLNH 1119
Query: 343 DALGDCLASFE-------SSQTTIIASTLLGSIVIFIPISS----EEYELLE 383
+ D SF + + +I+ + L G+I IP+ + E ++LLE
Sbjct: 1120 FYINDIPMSFHLIASPQMADRASILYAGLQGTIGYLIPLITRREIEFFDLLE 1171
>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
Length = 1088
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ ++ +
Sbjct: 880 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLVTVK-- 937
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E L YH+GE R GS + +LP D +G T+I
Sbjct: 938 -KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q+ L + + G H ++RS N R
Sbjct: 988 FGTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKR 1039
>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
Length = 1088
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 880 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 937
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 938 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 988
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I + + E+Y LE +Q+ L + + G H ++RS N R
Sbjct: 989 GTVNGVIGVIASLPQEQYMFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKR 1039
>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
queenslandica]
Length = 1160
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 92/233 (39%), Gaps = 44/233 (18%)
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
S DG KLE T QL + +A+ P+ R L G + + + +R
Sbjct: 890 SPDGSKLEHVHTTQLD--------DVPIAMAPFQGR-LLVGVGKLLRI--YDIGKKKMLR 938
Query: 223 RFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
+ ++++ + R+ VGD ++ + F Y +L + R ++
Sbjct: 939 KCENKHLPYLVVDIKVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCIL 998
Query: 283 DVDTAVVSDRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGE 325
D +T +D+ G+I +L +D+++++ S +L +YH+GE
Sbjct: 999 DYNTVASADKFGNITILRLPSDVTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGE 1058
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
++ K S I ++ +TL GSI I +P SS+E
Sbjct: 1059 GINTLHKVSLI----------------PGGSEVLVYTTLSGSIGILVPFSSKE 1095
>gi|297820284|ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
gi|297323863|gb|EFH54284.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 175 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 220
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 221 NKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFD 280
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ + S+ +E++ + + N PN +H+G++
Sbjct: 281 TMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVT 340
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I +I+ T++GSI + S ++ + ++
Sbjct: 341 CLQKASMI----------------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLE- 383
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ + PL G DH +RS PV+
Sbjct: 384 -MHMRQEYPPLCGRDHMAYRSAYFPVK 409
>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
Length = 1214
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ + S+ +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I +I+ T++GSI + S ++ + ++
Sbjct: 1101 CLQKASMI----------------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLE- 1143
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ + PL G DH +RS PV+
Sbjct: 1144 -MHMRQEYPPLCGRDHMAYRSAYFPVK 1169
>gi|350584885|ref|XP_003126937.3| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
Length = 425
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 41/158 (25%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 283 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 338
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 339 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 394
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+++ +TL G I I +P +S E
Sbjct: 395 ------------PGGSESLVYTTLSGGIGILVPFTSHE 420
>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 61/267 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 354 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 399
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 400 NKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFD 459
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ + S+ +E++ + + N PN +H+G++
Sbjct: 460 TMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVT 519
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I +I+ T++GSI + S ++ + ++
Sbjct: 520 CLQKASMI----------------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLE- 562
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ + PL G DH +RS PV+
Sbjct: 563 -MHMRQEYPPLCGRDHMAYRSAYFPVK 588
>gi|255316764|gb|ACU01763.1| putative DNA damage binding protein [Brachypodium distachyon]
Length = 384
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 14/173 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + + ++D D V ++ ++ V
Sbjct: 176 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKN 235
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE R GS + +LP D +G T+I
Sbjct: 236 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLP-DTEMGQI--------PTVIF 284
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G I I + ++Y LE +Q+ L + H ++RS N +
Sbjct: 285 GTINGVIGIIASLPHDQYVFLEKLQSILG--KFIKGVGSLSHDQWRSFHNEKK 335
>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1218
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 13/181 (7%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ F Y L D + R V ++D DT D+ G++ VL
Sbjct: 998 RIVVTDVQESFHFLRYRPSDNMLAVFADDSNPRWVTSSTMVDYDTVAAGDKFGNVFVL-- 1055
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE------SS 355
RL + + P +G ++ + + +GD + + + S
Sbjct: 1056 --RLPQDLQDDLEDDPTGGRLLGSSKNTLNGAAQKADTIINFHVGDTVTTMQKTALIPSG 1113
Query: 356 QTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ +T LG+I + IP +++ + + + ++ + + P+ G DH FRS P +
Sbjct: 1114 SECLVYTTTLGAIGVLIPFTTQSDIDFFKHLE--MHMRQENPPICGRDHLAFRSHYFPSK 1171
Query: 415 K 415
Sbjct: 1172 N 1172
>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
Length = 1057
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 16/215 (7%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+LRL GM+ + P ++ LAS Y+ + + QR+ + + R +
Sbjct: 779 KLRLISQLKTGGMIDCVRP-IEGKLLASIQGTLYLYRWQS---QRLVKVSSRRLPSVTRC 834
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+T H I GD ++ + Y + +L ++ + V +D + + ++R+G
Sbjct: 835 MTTHENFIMTGDLAYSVVMFQYDRQSDQLLEVAAHEKTKEVLAMKAIDSNLVIGAEREGH 894
Query: 296 IAVLS-CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES 354
+ VL C D + ++ E L +H+G++ R GS + +
Sbjct: 895 LFVLEHCQDEV---SADEPLLDVISTWHLGDVVSRFRFGSL--------GMNNVDPDSSP 943
Query: 355 SQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL 389
++I +T G+I + +S E Y+LL +Q +
Sbjct: 944 IAPSLIFATASGAIGVIADLSPERYKLLYQMQCNM 978
>gi|154419018|ref|XP_001582526.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
gi|121916762|gb|EAY21540.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
Length = 1142
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 226 VGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR 274
VGRT+ + I L A TRI GD + F + ++ L D R
Sbjct: 900 VGRTKLLKKCCSKAFPHCINYLKAFGTRIIAGDAMESFHFVKFDKEEDILSIFADDMVPR 959
Query: 275 LVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEI-----AVS 329
+ +D T D+ GS +L RL + + + + P+ H E A +
Sbjct: 960 HPLSAIGLDRSTVCCGDKFGSFCIL----RLPPDINDDAEIDPSDVGHAFENEKFPGAKN 1015
Query: 330 IRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAV 385
+ S +Y + G CL+ + T+I+ T+ G I +FIP+ ++ + LLE
Sbjct: 1016 KVELSNMYHI-GSPITGLCLSQGDFENTSIVYGTVDGEIGLFIPLKTDTDARLFRLLEDE 1074
Query: 386 QARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+L P +G +FRS P++
Sbjct: 1075 MKKLIKSP-----VGRFIEQFRSYYTPLK 1098
>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1090
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + + ++D D V ++ ++ V
Sbjct: 882 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKN 941
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE R GS + +LP D +G T+I
Sbjct: 942 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLP-DTEMGQI--------PTVIF 990
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I I + ++Y LE +Q+ L + H ++RS N
Sbjct: 991 GTINGVIGIIASLPHDQYVFLEKLQSILG--KFIKGVGSLSHDQWRSFHN 1038
>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
Length = 1218
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ + F Y + +L D + R V+ ++D T ++D+ G+++V+
Sbjct: 1000 RIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHTVAIADKFGNLSVVRL 1059
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS------ 355
+R+ ++ + ++ + + G + + +K +L A+ +GD + S + +
Sbjct: 1060 PERVNEDVQDDPTVSKS-VWDRGWLNGASQK----VELVANFFIGDTITSLQKTSLMPGA 1114
Query: 356 QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ +T+ G+I + +S +E + ++ + + PL G DH +RS P +
Sbjct: 1115 NEALVYTTIGGAIGCLVSFMSKDEVDFFTNLE--MHVRSEYPPLCGRDHLSYRSYYAPCK 1172
>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
Length = 1220
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ + F Y + +L D + R V ++D T V+D+ G++AV+
Sbjct: 1002 RIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVTCVCVLDYHTVAVADKFGNLAVVRL 1061
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS------ 355
+R+ ++ + ++ + + G + + +K +L ++ +GD + S + +
Sbjct: 1062 PERVNEDVQDDPTVSKS-VWDRGWLNGASQK----VELVSNFFIGDTITSLQKTSLMPGA 1116
Query: 356 QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ +T+ G+I + +S +E + ++ + + PL G DH +RS P +
Sbjct: 1117 NEALVYTTIGGAIGCLVSFMSKDEVDFFTNLE--MHVRSEYPPLCGRDHLAYRSYYAPCK 1174
>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
Length = 1209
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 79/187 (42%), Gaps = 10/187 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R + ++D +T D+
Sbjct: 982 IVGLQTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDTVSRWMTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C ++ + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKISEEADEDGSGAHLIHERGYLHGTPNRLELMIHTYTQDIPTSVHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFMSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVR 414
S PV+
Sbjct: 1157 SYYAPVK 1163
>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ +I V
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 941 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + ++Y LE +QA L + + G H ++RS N
Sbjct: 990 GTVNGVIGVIASLPHDQYVFLEKLQANL--RKVIKGVGGLSHEQWRSFNN 1037
>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str.
Silveira]
Length = 970
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 742 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 801
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 802 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 853
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 854 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 911
Query: 402 DHSEFRSRENPVR 414
DH +RS P +
Sbjct: 912 DHLIYRSYYAPAK 924
>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ +I V
Sbjct: 860 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKN 919
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 920 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 968
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + ++Y LE +QA L + + G H ++RS N
Sbjct: 969 GTVNGVIGVIASLPHDQYVFLEKLQANL--RKVIKGVGGLSHEQWRSFNN 1016
>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1209
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 981 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 1040
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 1041 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 1092
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 1150
Query: 402 DHSEFRSRENPVR 414
DH +RS P +
Sbjct: 1151 DHLIYRSYYAPAK 1163
>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
Length = 1242
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 42/198 (21%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV---- 298
I V D + + F + + + D ++R + ++D T + DR G+I V
Sbjct: 1015 IVVCDSSESVSFMRFDQTKNQFIAFCNDTAKRQITALEVLDSRTVIAGDRFGNIFVSRIP 1074
Query: 299 LSCSDRLEDN----------ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ +++LE+N + L C ++ +I S+ KGSF+
Sbjct: 1075 KNVAEQLENNVLMKFEEETLGASSSRLDKLCDFYTQDIVTSLHKGSFVV----------- 1123
Query: 349 LASFESSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIH-----------PLTA 396
+II + L G++ I +P+ +++E +LL ++ L +
Sbjct: 1124 -----GGSESIIYTGLQGTVGILLPLATTQEVDLLMKLENSLRDYFNDSFDDFDNTKQGF 1178
Query: 397 PLLGNDHSEFRSRENPVR 414
L+G +H +FR NPV
Sbjct: 1179 NLVGREHLKFRGYYNPVE 1196
>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
C-169]
Length = 1205
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 23/249 (9%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL L + T G+ A+ + R LA G + + + +R+ + I
Sbjct: 925 QLELIHKTPTGGIPGALAAFKGR-LLAGVGPTLRI--YEAGKKKLLRKCEHRKLPTHIAT 981
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L RI VGD ++ + ++ Y + L + D + R + + +D DT +D+ +
Sbjct: 982 LATSGDRIFVGDLQESMHYFRYKANENALYEYADDIAPRHLTAALPLDYDTVAGADKFCN 1041
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLP--ADDALGDCLASFE 353
I V RL + S + P G A + G+ +KL + +GD + S +
Sbjct: 1042 IFV----TRLPRDVSTQVEEDPTGGKFAG--AAGLLNGA-PHKLEDVVNFHVGDLVTSLQ 1094
Query: 354 SS------QTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDHSE 405
+ + ++ +T++G+I +P S E+ + ++ L HP P+ G DH
Sbjct: 1095 RAVLQPGGREVLLYATVMGAIGAMLPFPSREDVDFFSHLEMHLRQEHP---PMGGRDHMS 1151
Query: 406 FRSRENPVR 414
+R PV+
Sbjct: 1152 YRGSYFPVK 1160
>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
Length = 1209
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 981 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 1040
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 1041 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 1092
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 1150
Query: 402 DHSEFRSRENPVR 414
DH +RS P +
Sbjct: 1151 DHLIYRSYYAPAK 1163
>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
Length = 1208
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 981 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 1040
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 1041 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 1092
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 1150
Query: 402 DHSEFRSRENPVR 414
DH +RS P +
Sbjct: 1151 DHLIYRSYYAPAK 1163
>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
Length = 1171
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 963 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGAEN--SFNLFTVR 1020
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 1021 KNSEGATDEERGRLEVAGEYHLGEFINRFRHGSLVMRLPDSDV---------GQIPTVIF 1071
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + E+Y LE +Q+ L + + G H ++RS N
Sbjct: 1072 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNN 1119
>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
Length = 1256
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 100/256 (39%), Gaps = 38/256 (14%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L + T P + LA+ + R L G + + + + +R+ R M++
Sbjct: 977 RLVLLHKTEVPDVPLAMKEFQGR-LLVGVGQSLRM--YDLGRKKLLRKCENKRMPSMVVS 1033
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
LT R+ GD + + Y +L + D R + L+D D+ +D+ G+
Sbjct: 1034 LTVTGDRVFAGDQMESCHCFKYRRAENRLVEFADDQVPRFMTKTCLLDYDSIAGADKFGN 1093
Query: 296 IAVLSCS-DRLEDNASPECNL----------TPN-----CAYHMGEIAVSIRKGSFIYKL 339
I VL D +D +P N PN +H+GE+ S+R+ + +
Sbjct: 1094 IFVLRVPLDVSDDVDNPTGNRLLWDSGHLSGAPNKVQQQLQFHVGEVVSSLRRTTLV--- 1150
Query: 340 PADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPL 398
++ ST+ GSI +P S ++ + ++ + T L
Sbjct: 1151 -------------PGGAEVLLYSTINGSIGALLPFKSRDDVDFFTHMEMYMRQEKPT--L 1195
Query: 399 LGNDHSEFRSRENPVR 414
G DH +RS P +
Sbjct: 1196 CGRDHISYRSYYLPAK 1211
>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
Length = 1209
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 10/187 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C ++ + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKVSEEADEDGSGAHLIHERGYLHGTPNRLDLMIHTYTQDIPTSLHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVR 414
S PV+
Sbjct: 1157 SYYAPVK 1163
>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1248
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 43/201 (21%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D F Y + + + D +R + +D DT V D+ G+I V
Sbjct: 1018 NRIMAADANISSTFVKYDQVENQFFPLADDIMKRKITSMCSLDYDTIVGGDKFGNIFVSR 1077
Query: 301 CSDRLEDNASPECNLTPN---------------CAYHMGEIAVSIRKGSFIYKLPADDAL 345
+ L A + L + C ++ G+I S KGS I L
Sbjct: 1078 IPEVLSKQADQDWGLIRHQDSYLNGAVSRLKNLCEFYSGDIPTSFSKGSLI--------L 1129
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH-----------P 393
G S+ +I + L+G++ IP ++ E + ++A L +
Sbjct: 1130 G--------SEESIFYTGLMGTVGALIPLVTKSEVQFFIELEAELRGYFDYNFDNFDEQK 1181
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
LLG DH + RS NPV+
Sbjct: 1182 NGYNLLGKDHLKHRSYYNPVK 1202
>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
Length = 1174
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L+L +ST + A+ + R L AG V + N + +++ + I +
Sbjct: 895 LKLKHSTQIDEIPYALAAWRGR-LLVGAGCNLRV--YEMGNQRILKKAEIKNLNSFITSI 951
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI 296
RI V + D I Y+ + ++ D R V ++D T + D+ +I
Sbjct: 952 MVKEDRIYVAEVSDSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIAGDKFENI 1011
Query: 297 AV----LSCSDRLED--------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
V L + E+ N +P + C +++GE+ S++K
Sbjct: 1012 FVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAP-FKMDQICNFYVGEVITSLQK------ 1064
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPL 398
+A +S ++ T +GSI P ++E ++ + + + PL
Sbjct: 1065 ----------IALVSTSSEVVVYGTSMGSIAALYPFDNKE-DIDFFLHLEMYLRVEHQPL 1113
Query: 399 LGNDHSEFRSRENPVR 414
G DH +FRS P +
Sbjct: 1114 SGRDHMQFRSAYGPCK 1129
>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
Length = 674
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D + V ++ ++ V
Sbjct: 466 IVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKN 525
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D+ + + YH+GE R GS + +LP D +G T+I
Sbjct: 526 SDAATDDERAKLEVVGE--YHLGEFVNRFRHGSLVMRLP-DSEIGKI--------PTVIF 574
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSREN 411
T+ G I I + + Y LE Q+ L + +GN H ++RS N
Sbjct: 575 GTINGVIGIIASLPHDHYTFLEKFQSTLVKY---IKGVGNMSHEQWRSFHN 622
>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
Length = 1089
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D + V ++ ++ V
Sbjct: 881 IVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D+ + YH+GE R GS + +LP D +G T+I
Sbjct: 941 SDAATDDERARLEVVGE--YHLGEFVNRFRHGSLVMRLP-DSDIGQI--------PTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSREN 411
T+ G I I + ++Y LE +Q+ L + +GN H ++RS N
Sbjct: 990 GTINGVIGIIASLPHDQYIFLEKLQSTLVKY---IKGVGNLSHEQWRSFHN 1037
>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
Length = 1197
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 105/272 (38%), Gaps = 51/272 (18%)
Query: 168 KLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVG 227
++ + E QLRL + P + PY LA G G + +R + +G
Sbjct: 906 RVVQGEQGQLRLHFIHKTP---IDDVPYA---MLAFQGRLLVGAG------KSLRIYDIG 953
Query: 228 RTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV 276
+ + + I+ L R+ D ++ + + Y +L D R +
Sbjct: 954 KKKMLRKCETKSIPNCIVSLHTQGHRVIATDVQESVHYVIYKHADNRLVVFADDTIPRWM 1013
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN--LTPNCAYHMGEIAVSIRKGS 334
++D +T D+ G+ V RL + S E + T N YH KG
Sbjct: 1014 TGSTMVDYETVAGGDKFGNFFV----SRLPGSISREVDEDTTGNRIYH--------EKGY 1061
Query: 335 FIYKLPADDAL-----GDCLASFESS------QTTIIASTLLGSIVIFIP-ISSEEYELL 382
D+L GD + S + + ++ ++ LG+I I++P +S E+ E
Sbjct: 1062 LQGAPNKIDSLCEYFTGDIITSLHKTTLLSGGREVVLTTSFLGAISIYVPFLSKEDVEFF 1121
Query: 383 EAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ ++ + PL G DH +RS PV+
Sbjct: 1122 QMLEMHMRAE--APPLAGRDHLLYRSYYIPVK 1151
>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 1078
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 20/196 (10%)
Query: 229 TRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV 288
R+ + L F R ++ + Y + D + R ++ + +D DT
Sbjct: 848 NRWTNIFLHVFFYRPYFRSSQESVHMMRYKKADNAFYIFADDVAPRYLSALLPLDYDTIA 907
Query: 289 VSDRKGSIAVLSCSDRLEDNASPECNLTP---NCAYHMGEIAVSIRKGSFIYKLPADDAL 345
D+ G++ +L RL AS + P A G++ + K + K +
Sbjct: 908 TGDKFGNLVIL----RLPQEASQQVEDDPTGGKMAAASGKLNGAPHKLEELVKF----HV 959
Query: 346 GDCLASFESS------QTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPL 398
GD + + + + Q ++ ST++G+I + P +S E+ + ++ L PL
Sbjct: 960 GDTITALQRAEMQAGGQEVLVYSTVMGAIGVVYPFTSREDVDFFSHLEMHLRQE--NPPL 1017
Query: 399 LGNDHSEFRSRENPVR 414
G DH +RS PVR
Sbjct: 1018 AGRDHLAYRSAYFPVR 1033
>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
Length = 1247
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 38/202 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDAR--KLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ + +R+ V D + ++ + + +L D R + ++D DT +
Sbjct: 1015 IVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSISRHTSASEMLDYDTTIGG 1074
Query: 291 DRKGSIAVLSCSDRLEDNA--SPE----------CNLTPN-----CAYHMGEIAVSIRKG 333
D+ G+I ++ C + +++ SP+ TPN Y +I VSI+K
Sbjct: 1075 DKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQKA 1134
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIH 392
+ I + GD + I + L G++ IP +S ++L + Q L++
Sbjct: 1135 NLI-------SGGDKV---------IFWAGLQGTLGALIPFTSRRNHKLFQ--QLELSLR 1176
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1177 SEDKPLSGRDHLTYRSYYAPVK 1198
>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus Af293]
Length = 1225
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 10/187 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C + + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVR 414
S PV+
Sbjct: 1157 SYYAPVK 1163
>gi|349605921|gb|AEQ01001.1| Splicing factor 3B subunit 3-like protein, partial [Equus caballus]
Length = 162
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 21/97 (21%)
Query: 321 YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEY 379
YH+GE +S++K + I +++ +TL G I I +P +S E++
Sbjct: 40 YHVGETVLSLQKTTLI----------------PGGSESLVYTTLSGGIGILVPFTSHEDH 83
Query: 380 ELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVRK 415
+ + V+ L + HP PL G DH FRS PV+
Sbjct: 84 DFFQHVEMHLRSEHP---PLCGRDHLSFRSYYFPVKN 117
>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
Length = 1202
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 93/268 (34%), Gaps = 53/268 (19%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL + T G+ A+C + R L G+A + + + +R+ +++
Sbjct: 914 QLTFVHKTPIDGVPRALCSFQGR-LLVGVGSALRL--YEMGKRKLLRKCENRNIPNLVVT 970
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
++ RI VGD + I F Y+ +L D R + +D DT +D+ G+
Sbjct: 971 ISTMGDRIYVGDVAESISFLKYNRILNELVIFADDTHPRWMTAACPVDYDTVAGADKFGN 1030
Query: 296 IAVLSCSDRLEDNASPECNLTPNCA--------------------YHMGEIAVSIRKGSF 335
I + RL DN S E + P YH+GE S++K +
Sbjct: 1031 IFL----TRLPDNVSDEISEEPGAVGMFEGNDLQGAHYKAEEIVQYHVGETVCSLQKATL 1086
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSE---------EYELLEAVQ 386
II T+ G I P S E L A
Sbjct: 1087 S----------------PGGSDAIIYGTMYGGIGALQPFVSREDVDFFLHLEMHLRGAAG 1130
Query: 387 ARLAIHPLTAPLLGNDHSEFRSRENPVR 414
AR P + G D FRS PV+
Sbjct: 1131 AR-EHKPAGEGICGRDQLSFRSYYFPVK 1157
>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus A1163]
Length = 1225
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 10/187 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C + + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVR 414
S PV+
Sbjct: 1157 SYYAPVK 1163
>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
Length = 1181
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 30/211 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 934 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIISRWT 991
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 992 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1040
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1041 QGAPNRLSLVVHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1100
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ +LA APL G DH +R P +
Sbjct: 1101 TLEMQLASQ--NAPLAGRDHLIYRGYYAPCK 1129
>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
Length = 1143
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 42/188 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 894 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKRRLLRKCE 939
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 940 NKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 999
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1000 TMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVT 1059
Query: 329 SIRKGSFI 336
++K S I
Sbjct: 1060 CLQKASLI 1067
>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1247
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 38/202 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDAR--KLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ + +R+ V D + ++ + + +L D R + ++D DT +
Sbjct: 1015 IVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSVARHTSASEMLDYDTTIGG 1074
Query: 291 DRKGSIAVLSCSDRLEDNA--SPE----------CNLTPN-----CAYHMGEIAVSIRKG 333
D+ G+I ++ C + +++ SP+ TPN Y +I VSI+K
Sbjct: 1075 DKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQKA 1134
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE-YELLEAVQARLAIH 392
+ I + GD + I + L G++ IP +S ++L + Q L +
Sbjct: 1135 NLI-------SGGDKV---------IFWAGLQGTLGALIPFTSRRTHKLFQ--QLELTLR 1176
Query: 393 PLTAPLLGNDHSEFRSRENPVR 414
PL G DH +RS PV+
Sbjct: 1177 SEDKPLSGRDHLTYRSYYAPVK 1198
>gi|209881602|ref|XP_002142239.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
gi|209557845|gb|EEA07890.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
Length = 1509
Score = 41.6 bits (96), Expect = 0.66, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
+ VGD + + Y + A++ E+I DPS V D + ++ + +VSD ++ +L+
Sbjct: 1231 LLVGDLMRSVGLWKYDKVAKQFEEICRDPSLAWVMDGIFINKNLYMVSDENKNVRILT-- 1288
Query: 303 DRLEDNASPECN--LTPNCAYHMGEIAVSIRKGSFIYKLP----ADDALG-DCLASFESS 355
+ E+ + E + L +H GEI + +KG + P + +G D S S
Sbjct: 1289 -KPENPINDEMDTVLQSIAHFHSGEIVSTFQKGKLMMPYPRCLQEINNIGLDFCHSLYSE 1347
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAI 391
Q I+ T GS+ + ++++ L+ + AI
Sbjct: 1348 Q--IVFGTAQGSMSVIFSLNADYKMFLQLIMFEEAI 1381
>gi|410079495|ref|XP_003957328.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
gi|372463914|emb|CCF58193.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
Length = 1267
Score = 41.6 bits (96), Expect = 0.67, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RIAVGD + + Y + + + + + D +R V +D T + D+ G+I L
Sbjct: 1009 RIAVGDNYESVTVYEFDKQSNEFIPLADDTIKRSVTALAFLDELTVIGGDKYGNIWTL-- 1066
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF-------ES 354
RL ++ P N N ++ +I + F KL + D SF S
Sbjct: 1067 --RLPEDTDP-VNTEINS---FRDLPKNIMECPFKLKLKNHFYVNDIPMSFHVIESLQRS 1120
Query: 355 SQTTIIASTLLGSIVIFIPISSE 377
+ T++ S L G+I IFIPI S+
Sbjct: 1121 DRVTVLYSGLQGTIGIFIPILSK 1143
>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
Length = 1178
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L+L +ST + A+ + R L AG V + N + +++ + I +
Sbjct: 899 LKLKHSTPIDEIPYALAAWRGR-LLVGAGCNLRV--YEMGNQRILKKAEIKNLNSFITSI 955
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI 296
RI V + D I Y+ + ++ D R V ++D T + D+ +I
Sbjct: 956 MVKEDRIYVAEVADSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIAGDKFENI 1015
Query: 297 AV----LSCSDRLED--------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
V L + E+ N +P + C +++GE+ S++K
Sbjct: 1016 FVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAP-FKMDQICNFYVGEVITSLQK------ 1068
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPL 398
+A +S ++ T +GSI P ++E ++ + + + PL
Sbjct: 1069 ----------IALVSTSSEVVVYGTSMGSIAALYPFDNKE-DIDFFLHLEMYLRVEHQPL 1117
Query: 399 LGNDHSEFRSRENPVR 414
G DH +FRS P +
Sbjct: 1118 SGRDHMQFRSAYGPCK 1133
>gi|336476853|ref|YP_004615994.1| coenzyme F420-reducing hydrogenase subunit delta [Methanosalsum
zhilinae DSM 4017]
gi|335930234|gb|AEH60775.1| coenzyme F420-reducing hydrogenase delta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 168
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVS--IRKGS 334
AD V++ +D+ + KGSI + S+ L+ N P N A+ M EI++S + GS
Sbjct: 61 ADKVII-IDSVITGSEKGSIIRIDGSELLKTNHDP------NPAFSMHEISLSDVLLAGS 113
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
+I KLP G + + ++ I+S +L ++ IP+ EE ++ E Q
Sbjct: 114 YIQKLPEIVVFGIEVGENTNELSSQISSKVLEAVDRIIPLIIEEMKIEENTQ 165
>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium
dendrobatidis JAM81]
Length = 1098
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESR---LLIVMRTELNNDTCSSDICCVDPLSGS---VLS 58
++L+++ LG TP+++ YH S +L V L N +DI C+ L G VL
Sbjct: 701 QKLHIKTIKLGETPRRIAYHDVSHTFGVLTVFSRNLPNGDL-ADISCLRLLDGQGYEVLD 759
Query: 59 SFKLELGETGKSMELVRVGHEQVL--VVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQ 116
S +L+ E S+ +R + L VGT + P E E +GR++V + M+
Sbjct: 760 SIELQPFEIASSLITIRFTDDDTLYYTVGTGFA-----FPH-EDEPVRGRILVFKVNDMR 813
>gi|226510488|ref|NP_001145925.1| uncharacterized protein LOC100279448 [Zea mays]
gi|219884971|gb|ACL52860.1| unknown [Zea mays]
Length = 416
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D + V ++ ++ V
Sbjct: 208 IVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKN 267
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D+ + YH+GE R GS + +LP D +G T+I
Sbjct: 268 SDAATDDERARLEVVGE--YHLGEFVNRFRHGSLVMRLP-DSDIGQI--------PTVIF 316
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSREN 411
T+ G I I + ++Y LE +Q+ L + +GN H ++RS N
Sbjct: 317 GTINGVIGIIASLPHDQYIFLEKLQSTLVKY---IKGVGNLSHEQWRSFHN 364
>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine max]
Length = 1068
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 860 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 917
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 918 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 968
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + E+Y LE +Q+ L + + G H ++RS N
Sbjct: 969 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNN 1016
>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine max]
Length = 1089
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 938
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 939 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + E+Y LE +Q+ L + + G H ++RS N
Sbjct: 990 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNN 1037
>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine max]
Length = 1068
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 860 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 917
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 918 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 968
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + E+Y LE +Q+ L + + G H ++RS N
Sbjct: 969 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNN 1016
>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine max]
Length = 1089
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 938
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 939 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + E+Y LE +Q+ L + + G H ++RS N
Sbjct: 990 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNN 1037
>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
Length = 1088
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 880 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 940 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 988
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + E+Y LE +Q+ L + + G H ++RS N
Sbjct: 989 GTVNGVIGVIASLPHEQYLFLEKLQSNL--RKVIKGVGGLSHEQWRSFNN 1036
>gi|363750540|ref|XP_003645487.1| hypothetical protein Ecym_3168 [Eremothecium cymbalariae DBVPG#7215]
gi|356889121|gb|AET38670.1| Hypothetical protein Ecym_3168 [Eremothecium cymbalariae DBVPG#7215]
Length = 1295
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV--- 298
RIAVGD + + + + + + D +R V +D T + DR +I V
Sbjct: 1028 RIAVGDIHESVTLFHFDKPKNMFIPVADDTVKRHVTTLRFLDECTVIGGDRFSNIWVLRL 1087
Query: 299 -LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE---- 353
L C ++++ + + I+ +I++ +F +KL L D S +
Sbjct: 1088 PLQCDKLIKEDFEGHLQVA------VSHISKNIKECNFKWKLLNHFYLNDIPISLQTVSS 1141
Query: 354 ---SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQ 386
S +T II + L G++ IP I+ E EL E+V+
Sbjct: 1142 AQFSDRTNIIYTGLQGTVGCIIPLITRREVELFESVE 1178
>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
Length = 1203
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 97/256 (37%), Gaps = 36/256 (14%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L+L +ST + +A Y R +A G + + + +R+ + I+ +
Sbjct: 921 LQLMHSTPCEDIPMAFNEYKGR-LIAGVGPILRI--YELGQKKLLRKVENKNFQAPIIQI 977
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI 296
RI GD ++ + Y + +L D R + L+D DT D+ ++
Sbjct: 978 QVDEGRIYAGDLQESVHVLKYKPEDVQLYIFSDDILNRWLTSFCLLDHDTIAGVDKFENV 1037
Query: 297 AV----LSCSDRLEDNASPE-------------CNLTPNCAYHMGEIAVSIRKGSFIYKL 339
+ + C D ED+ + + P C + GE+ I+K S
Sbjct: 1038 FINRLPVGCEDDAEDDPTATKFKWENGYLNGAAFKMDPICQFFTGEVGTCIQKCSL---- 1093
Query: 340 PADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPL 398
+ L+ S I+ T GS+ +P + EE + ++ L I PL
Sbjct: 1094 -------NTLSGTNSE--IILFGTTSGSLGALLPFETREEIDFFVHLEMYLRIE--AQPL 1142
Query: 399 LGNDHSEFRSRENPVR 414
G DH FRS PV+
Sbjct: 1143 CGRDHVTFRSSYVPVK 1158
>gi|452824696|gb|EME31697.1| hypothetical protein Gasu_10760 [Galdieria sulphuraria]
Length = 1254
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 7/134 (5%)
Query: 186 PGMVLAICPYLDRYFLASAGNAFYVCGFPND-NPQRVRRFAVGRTRFMIMLLTAHFTRIA 244
PG V+ + P + L S ++ F D Q + A G TR +I+++ I
Sbjct: 983 PGAVMVVTPLDEETLLVSCNE--HLLAFAMDPQEQTLIEIARGETRGLILVIDVEHPFIF 1040
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV----DTAVVSDRKGSIAVLS 300
VGD +D + Y H R++ + D ++LV V DR+ + VL
Sbjct: 1041 VGDRKDSVHIYCIHTSNREIVPVCQDEYRKLVVSLATQPFHDHGQLVFVGDRQAMLHVLW 1100
Query: 301 CSDRLEDNASPECN 314
C N + E +
Sbjct: 1101 CPFSKAWNTASEWD 1114
>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
Length = 1033
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 825 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 884
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 885 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 933
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + E+Y LE +Q+ L + + G H ++RS N
Sbjct: 934 GTVNGVIGVIASLPHEQYIFLEKLQSNL--RRVIKGVGGLSHEQWRSFNN 981
>gi|281202916|gb|EFA77118.1| G-protein-coupled receptor family protein [Polysphondylium pallidum
PN500]
Length = 1820
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARK----LEQIYCDPSQRLVADCVLMDVDTAVVSD 291
L RI VG G+ Y Y + L ++ + L + C+ + D V+ D
Sbjct: 1097 LAYQNNRIMVGTQNTGLKVYRYTQSLNNQPDTLGKLKYQQTPMLTSSCLFLSPDEYVIVD 1156
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA-VSIRKGSFIYKLPADDALGDCLA 350
G+I+VL DN+ P N N + IA SI++ C
Sbjct: 1157 IFGNISVL------HDNSDPS-NEDRNTT--LDTIANFSIKES--------------CTK 1193
Query: 351 SFESSQTTIIASTLLGSIVIFIPIS-SEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSR 409
+I LG + + I+ +++Y+LL +Q RL LTAPLL NDH +RS
Sbjct: 1194 LHRIDNNRLIVGGGLGGVHMISKINNTKDYDLLLELQRRLCEFKLTAPLLSNDHLCYRSE 1253
Query: 410 ENPVRK 415
+ +R
Sbjct: 1254 MSMMRN 1259
>gi|156841606|ref|XP_001644175.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156114812|gb|EDO16317.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 1346
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RIAVGD + ++ + Y+ D++ L+ I D ++R V +D T + SD+ +I L
Sbjct: 1076 RIAVGDIHESVMIFDYNSDSKTLKPIADDITKRDVISIEFLDSRTVIGSDKYSNIWTLRI 1135
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLP 340
LED+ N+ + ++ S I KLP
Sbjct: 1136 D--LEDDQKVLDNVE-------NPMLIASENSSMISKLP 1165
>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
Length = 1166
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 217 NPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV 276
N + +R+ V I + RI V D + F + + + D R
Sbjct: 924 NKKLLRKSEVRAVPNFITTIQTQGYRIIVTDAQHSAFFVVFKPEDNRYIVFADDCVARWA 983
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRK 332
++D DT V D+ ++ +L C + + A E + L H + +
Sbjct: 984 TATAMVDYDTVVGGDKFSNLWLLRCPESVSQLADEENSGSKLLHEKPFLHSSPHKLDLMA 1043
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI 391
+F+ +P + E ++ I+ + LLG+I + P ++ E+ + +++ L
Sbjct: 1044 HTFVNDIPTSI---QKVQLVEGARDVIMWTGLLGTIGVLSPFVNREDVRFFQQLESLLRA 1100
Query: 392 HPLTAPLLGNDHSEFRSRENPVR 414
L+ ++G DH +RS PV+
Sbjct: 1101 EDLS--IVGRDHLAYRSYYVPVK 1121
>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
Length = 1158
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y E++ D + ++ ++D DT + ++ S + C
Sbjct: 938 ILVGDLMRSITLLQYKTMEGSFEEMARDSNPNWMSAVEILDDDTFLGAEN--SFNLFVCQ 995
Query: 303 -DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D LT +H+G++ R GS + D + L + +Q ++
Sbjct: 996 KDSAATTEEERQQLTEVGRFHLGDMVNVFRHGSLVM-----DHAAETLTT--PTQGCVLF 1048
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
T+ G+I + + SE Y L VQ R+A + P+ +HS +RS
Sbjct: 1049 GTVHGAIGVVTQLPSEFYHFLSEVQTRMA--RVIKPVGKIEHSFWRS 1093
>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1217
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 25/195 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 989 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1048
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1049 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVVTSITKIP 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
+ ++ +T+ G++ +P +SS++ E + ++ + ++ L+
Sbjct: 1109 L----------VAGGRDVLVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDIS--LV 1156
Query: 400 GNDHSEFRSRENPVR 414
G DH +R P++
Sbjct: 1157 GRDHIAYRGYYVPIK 1171
>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1090
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 16/207 (7%)
Query: 207 AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQ 266
A Y +D + ++ + + + + + I VGD I Y + +E+
Sbjct: 846 ALYKWTLRDDGTRELQYESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEGAIEE 905
Query: 267 IYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMG 324
D + + ++D DT + ++ ++ + ++ D A+ E L YH+G
Sbjct: 906 RARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNN---DAATDEERGRLEVVGEYHLG 962
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEA 384
E R GS + +LP +A S T+I T+ G I + + +++ L+
Sbjct: 963 EFVNRFRHGSLVMRLPDSEA---------SQIPTVIFGTVNGVIGVIASLPQDQFLFLQK 1013
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSREN 411
+Q L + + G H ++RS N
Sbjct: 1014 LQQALV--KVIKGVGGLSHEQWRSFSN 1038
>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1218
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 25/195 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 990 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1049
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1050 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVVTSITKIP 1109
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
+ ++ +T+ G++ +P +SS++ E + ++ + ++ L+
Sbjct: 1110 L----------VAGGRDVLVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDIS--LV 1157
Query: 400 GNDHSEFRSRENPVR 414
G DH +R P++
Sbjct: 1158 GRDHIAYRGYYVPIK 1172
>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1249
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 43/201 (21%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D F Y + + + D +R + +D DT V D+ G++ V
Sbjct: 1019 NRIMAADASMSSTFVKYDQVENQFFPLADDVMKRKITSMCPLDYDTIVGGDKFGNVFVSR 1078
Query: 301 CSDRLEDNASPECNLTPN---------------CAYHMGEIAVSIRKGSFIYKLPADDAL 345
+ L + L + C ++ G+I S KGS I L
Sbjct: 1079 IPEFLSKQVDQDWGLIRHQDSYLNGAASRLKNLCEFYSGDIPTSFSKGSLI--------L 1130
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH-----------P 393
G S+ +I + L+G++ IP ++ E + ++A L +
Sbjct: 1131 G--------SEESIFYTGLMGTVGALIPLVTKNEVQFFIELEAELRSYFDYNFDNFDEQK 1182
Query: 394 LTAPLLGNDHSEFRSRENPVR 414
LLG DH + RS NPV+
Sbjct: 1183 NGHNLLGKDHLKHRSYYNPVK 1203
>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
Length = 1246
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 40/203 (19%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDA---RKLEQIYCDPSQRLVADCVLMDVDTAVV 289
I+ L +R+ V D + Y H+D ++ D QR ++D DT V
Sbjct: 1014 IVDLKTQGSRLVVSDSVQSVT-YVVHKDQIHPNRMIPFIDDTIQRHTTCTEMLDYDTTVG 1072
Query: 290 SDRKGSIAVLSCSDRLEDNA--SPECN---------------LTPNCAYHMGEIAVSIRK 332
D+ G++ ++ C ++ +++ SP+ + L Y +I +SI+K
Sbjct: 1073 GDKFGNLWLVRCPQKVSESSDESPDGSDILVDKSYLGGTANRLDSVAHYFANDIPISIQK 1132
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAI 391
+ ++ I + L G++ IP +S ++++ + Q L +
Sbjct: 1133 THLL----------------SGAERIIFWAGLQGTLGALIPFNSRRQHKMFQ--QLELQL 1174
Query: 392 HPLTAPLLGNDHSEFRSRENPVR 414
P+ G DH FRS NPV+
Sbjct: 1175 RSDDKPMSGRDHLAFRSYFNPVK 1197
>gi|402577494|gb|EJW71450.1| hypothetical protein WUBG_17643 [Wuchereria bancrofti]
Length = 85
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV-LMDVDTAVVSDRKGSIAVLS 300
RI V D ++ + F Y + +L I+CD + CV L+D DT V DR G+IAV+S
Sbjct: 4 RIVVSDSQESVHFMRYKKQDGQLS-IFCDETSPRYVTCVCLLDYDTVAVGDRFGNIAVVS 62
>gi|408378624|ref|ZP_11176221.1| Twin-arginine translocation pathway signal sequence
domain-containing protein [Agrobacterium albertimagni
AOL15]
gi|407747761|gb|EKF59280.1| Twin-arginine translocation pathway signal sequence
domain-containing protein [Agrobacterium albertimagni
AOL15]
Length = 637
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 44 SDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAEST 103
S + +DP +G L + GE MEL +G+ QV+ V + +P+ E
Sbjct: 108 SGVADIDPANGVSLEASDKVFGENTDGMELFAIGNHQVIAVNHEYVNNETNLPNNEKGMP 167
Query: 104 KGRLIVLCIEHMQ 116
KG V ++H+Q
Sbjct: 168 KGLDDVKILQHLQ 180
>gi|296806499|ref|XP_002844059.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238845361|gb|EEQ35023.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 1348
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRL--VADCVLMDVDT--AVVSDRKGSIAVLS 300
VGD G+ F Y E+ KL+ ++ ++ + +A L D + +V+D ++ VL
Sbjct: 1125 VGDAIKGLWFTGYSEEPYKLD-LFGKENENIAVIAADFLPDGNRLYVLVADDDCNLHVLQ 1183
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQT 357
D + ++S L +H+G A ++ +GS PAD D A S+
Sbjct: 1184 Y-DPEDPSSSKGDRLLHRNVFHVGHFASTMTLLPQGSHTPHSPADRDAMDTDAPLPPSKY 1242
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARL 389
I+ + GS+ I P++ + Y L A+Q++L
Sbjct: 1243 QILMTFQTGSVGIITPLNEDSYRRLLALQSQL 1274
>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
Length = 1089
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D D + ++ ++ V
Sbjct: 881 IVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQT-TII 360
SD D + YH+GE R GS + +LP + E+SQ T+I
Sbjct: 941 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDN----------ETSQIPTVI 988
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
T+ G I + + E++ L+ +Q LA + + G H ++RS
Sbjct: 989 FGTVNGVIGVVASLQQEQFNFLQRLQHCLA--KVIKGVGGLSHEQWRS 1034
>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis UAMH
10762]
Length = 1224
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 10/178 (5%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ D + I + + ++ D QR ++D +T+ D+ G++ V+ C
Sbjct: 1006 RLICADVSESITYVVFKPKHNRMIGFVDDVIQRWTTTAAMIDYETSAGGDKFGNLWVVRC 1065
Query: 302 SDRLEDNASPEC--NLTPNCAYHMG--EIAVSIRKGSFIYKLPADDALGDCLASFESSQT 357
++ + E N ++G + +R F +P +A Q
Sbjct: 1066 PEQASKESDEEGLGGYIVNERSYLGGAPYRLELRSHFFTQDIPMSIQRTALVAG---GQE 1122
Query: 358 TIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ S L G++ + +P +S E+ E Q I PL G DH +RS PV+
Sbjct: 1123 VLFWSGLQGTLGMLVPFVSREDVEFF--TQLETLIRAEEPPLAGRDHLMYRSYYVPVK 1178
>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
Length = 1089
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D D + ++ ++ V
Sbjct: 881 IVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQT-TII 360
SD D + YH+GE R GS + +LP + E+SQ T+I
Sbjct: 941 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDN----------ETSQIPTVI 988
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
T+ G I + + E++ L+ +Q LA + + G H ++RS
Sbjct: 989 FGTVNGVIGVVASLQQEQFNFLQRLQHCLA--KVIKGVGGLSHEQWRS 1034
>gi|253744540|gb|EET00740.1| Hypothetical protein GL50581_2007 [Giardia intestinalis ATCC 50581]
Length = 1446
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD-PSQRLVADCVLMDVDTAVVS 290
+I L++ TRI + G+ +SY + RKL D R+V V + D V+
Sbjct: 1243 IIRLVSLDITRIIAVMNKAGLAVFSYSQSKRKLTLELTDIVPMRIVTAIVPLSPDVIVIG 1302
Query: 291 DRKGSIAVLSC 301
DR G+I+VLSC
Sbjct: 1303 DRFGTISVLSC 1313
>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
Length = 1206
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI VGD + F Y D +R + +D DT + D+ G++ V
Sbjct: 977 RIVVGDGSNSTTFLKYDSSDNIFVSFADDVMKRHITALECLDHDTVIGGDKFGNVFVNRI 1036
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKG---SFIYKLPADDALGDCLASFESSQTT 358
L A E +L +++ A + KG F+ +P G + + S
Sbjct: 1037 PFTLSKQADQEWSLVKYQDHYLNS-AGNRSKGLCEFFLQDIPTSFFKGTLVTGGKES--- 1092
Query: 359 IIASTLLGSIVIFIP-ISSEEYELLEAVQ--ARLAIHP---------LTAPLLGNDHSEF 406
I + L GS+ F P IS E A++ R + P L LLG D +F
Sbjct: 1093 IFYTGLCGSLGFFEPLISKSEVSFFTALENSIRKVLDPNLEEHDKKRLYCQLLGKDQLKF 1152
Query: 407 RSRENPVR 414
R NPV+
Sbjct: 1153 RGYYNPVK 1160
>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
Length = 1209
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 968 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LISFADDIIPRWT 1025
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 1026 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1074
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1075 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1134
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ +LA PL G DH +R P
Sbjct: 1135 TLEMQLASQ--NPPLAGRDHLIYRGYYAP 1161
>gi|326477251|gb|EGE01261.1| protein kinase subdomain-containing protein [Trichophyton equinum CBS
127.97]
Length = 1267
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV---VSDRKGSIAVLSC 301
+GD G+ F Y E+ KL+ + V D + + V+D ++ VL
Sbjct: 1045 IGDAFKGLWFIGYSEEPYKLDLFGKENENLAVVDADFLPDGNKLYILVADDDCNLHVLQY 1104
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQTT 358
D + ++S L +H G A ++ G++ P D+ D S S+
Sbjct: 1105 -DPEDPSSSKGDRLLHRSVFHTGHFASTMTLLPHGAYTPSAPVDEDAMDT-DSLPPSKYQ 1162
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARL 389
I+ + GSI + P+S + Y L A+Q++L
Sbjct: 1163 ILMTFQTGSIAVITPLSEDSYRRLLALQSQL 1193
>gi|326471884|gb|EGD95893.1| protein kinase subdomain-containing protein [Trichophyton tonsurans
CBS 112818]
Length = 1398
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV---VSDRKGSIAVLSC 301
+GD G+ F Y E+ KL+ + V D + + V+D ++ VL
Sbjct: 1176 IGDAFKGLWFIGYSEEPYKLDLFGKENENLAVVDADFLPDGNKLYILVADDDCNLHVLQY 1235
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQTT 358
D + ++S L +H G A ++ G++ P D+ D S S+
Sbjct: 1236 -DPEDPSSSKGDRLLHRSVFHTGHFASTMTLLPHGAYTPSAPVDEDAMDT-DSLPPSKYQ 1293
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARL 389
I+ + GSI + P+S + Y L A+Q++L
Sbjct: 1294 ILMTFQTGSIAVITPLSEDSYRRLLALQSQL 1324
>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
Length = 1209
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 968 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 1025
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 1026 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1074
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1075 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1134
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ +LA PL G DH +R P
Sbjct: 1135 TLEMQLASQ--NPPLAGRDHLIYRGYYAP 1161
>gi|302654423|ref|XP_003019019.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
gi|291182709|gb|EFE38374.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
Length = 460
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 200 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 257
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 258 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 306
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 307 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 366
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ +LA PL G DH +R P +
Sbjct: 367 TLEMQLASQ--NPPLAGRDHLIYRGYYAPCK 395
>gi|302504585|ref|XP_003014251.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
gi|291177819|gb|EFE33611.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
Length = 460
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 200 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 257
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 258 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 306
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 307 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 366
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
++ +LA PL G DH +R P +
Sbjct: 367 TLEMQLASQ--NPPLAGRDHLIYRGYYAPCK 395
>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
Length = 1188
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 947 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 1004
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 1005 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1053
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1054 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1113
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ +LA PL G DH +R P
Sbjct: 1114 TLEMQLASQ--NPPLAGRDHLIYRGYYAP 1140
>gi|326426696|gb|EGD72266.1| hypothetical protein PTSG_00286 [Salpingoeca sp. ATCC 50818]
Length = 1104
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 14/172 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
+ VGD + + +D KL+ + + V+ C L++ +V+ S++V C
Sbjct: 886 VLVGDMLNAVFVMQKAQD--KLQLVAGSQTANWVSSCALVNETVFLVASHAHSLSV--CQ 941
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
E ++ + L ++GE S + + D +S T +
Sbjct: 942 REFEPGSTMQ-TLNAKFEIYLGETVTSFVRAALGSAAAVD-------SSMPLRNTFFVFG 993
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
T+ G + +P++ + ELL A++ R+ L G DH EFR+ + R
Sbjct: 994 TMGGGLACLLPLTPPQTELLTALECRM--EEKIGGLGGLDHREFRTARDEQR 1043
>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 12/148 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ +I V
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 941 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARL 389
T+ G I + + ++Y LE +QA L
Sbjct: 990 GTVNGVIGVIASLPHDQYVFLEKLQANL 1017
>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 1217
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 25/195 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 989 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1048
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1049 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVVTSITKIP 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
+ ++ +T+ G++ +P +S ++ E + ++ + ++ L+
Sbjct: 1109 L----------VAGGRDVLVYTTISGAVGALVPFVSPDDIEFMSTLEMHMRTQDIS--LV 1156
Query: 400 GNDHSEFRSRENPVR 414
G DH +R P++
Sbjct: 1157 GRDHIAYRGYYVPIK 1171
>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
Length = 1084
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 11/149 (7%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + SY E+I D + + ++D DT + ++ S + +C
Sbjct: 865 ILVGDLMRSVTLLSYKPMEGCFEEIARDYNPNWMTSIDVLDDDTFLGAEN--SFNIFTCQ 922
Query: 303 -DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D +L YH+GE R GS + + P G+C + +Q +++
Sbjct: 923 KDSAATTDEERQHLQEVGLYHLGEFVNVFRHGSLVMQHP-----GECTS---PTQGSVLF 974
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLA 390
T+ G++ + + E Y L VQ +LA
Sbjct: 975 GTVNGALGLVTQLPQEFYLFLLEVQNKLA 1003
>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM 1558]
Length = 1214
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSDRKGSIAVLS 300
RI VGD ++ F Y + ++ D +Q CV +D DT D+ G++ V
Sbjct: 995 RIIVGDMQESTFFCVYRSIPTRQLLVFGDDTQPRFLTCVTNVDYDTVACGDKFGNVFV-- 1052
Query: 301 CSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFES--- 354
+R++ S + + P A + G + + K + I A +G + S
Sbjct: 1053 --NRMDQAVSEKVDDDPTGAGILHEKGFLMGAAHKTTLI----AHYQVGSVVTSLTKVSL 1106
Query: 355 ---SQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ ++ +T+ G++ +P IS ++ E + ++ + ++ L+G DH +R
Sbjct: 1107 VPGGRDVLVYTTISGAVGALVPFISMDDVEFMTTLEMHMRSQNIS--LVGRDHLAYRGYY 1164
Query: 411 NPV 413
PV
Sbjct: 1165 APV 1167
>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
H99]
Length = 1217
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 25/195 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 989 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1048
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1049 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVVTSITKIP 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
D L + +T+ G++ +P +SS++ E + ++ + ++ +
Sbjct: 1109 LVAGGRDVL----------VYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISP--V 1156
Query: 400 GNDHSEFRSRENPVR 414
G DH +R P++
Sbjct: 1157 GRDHIAYRGYYVPIK 1171
>gi|440294229|gb|ELP87246.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
Length = 1168
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
+I + DGI F +++ ++ + IY D R V + + + SD+ G I V
Sbjct: 952 KIQLVGISDGISFVRFNQTKQEFD-IYADTLPRWTVKSVALTPTSYIGSDKFGQIFVEGL 1010
Query: 302 SDRLEDNASPECN--LTPNCAYHMGEIAVSIRKGSFIYKLPADDALG--DCLASFESSQT 357
E+NAS + L+ + G ++ F D A G +C + Q
Sbjct: 1011 DKETEENASNIFSSILSGEKTIYNGAKYKAVSLNEFYL---GDIATGFVNCCVRIGAPQI 1067
Query: 358 TIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
I+ S LLG I IP++ E E E ++ + + G DH +RS PV+
Sbjct: 1068 FIV-SHLLGGISALIPLNGFGEIEFFEQLEMHMRVRHQNVN--GRDHIAYRSSVVPVK 1122
>gi|89632640|gb|ABD77552.1| splicing factor 3b subunit 3 [Ictalurus punctatus]
Length = 131
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 321 YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEY 379
YH+GE A+S++K + I +++ +TL G I I +P +S E++
Sbjct: 9 YHIGETALSLQKTTLI----------------PGGSESLVYTTLSGGIGILVPFTSHEDH 52
Query: 380 ELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVR 414
+ + ++ + PL G DH FRS PV+
Sbjct: 53 DFFQHLEMHMRSE--FPPLCGRDHLSFRSYYFPVK 85
>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
Length = 1171
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 33/155 (21%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL- 299
TRI V D ++ F Y +L D + R + C +D DT +D+ G+I +
Sbjct: 968 TRIVVSDIQESFHFVKYKPRDNQLVVFADDVNPRWLTCCCYLDYDTLAGADKFGNIFTVR 1027
Query: 300 ---SCSDRLEDNAS-------------PECNLTPNCAYHMGEIAVSIRKGSFIYKLPADD 343
SD ++++ + + L C Y +GE +S++K + I
Sbjct: 1028 LPSGSSDDVDEDPTGTKAFWDRGLLNGAQQKLETMCNYFVGETVLSLQKATLI------- 1080
Query: 344 ALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+++ +TL G + + +P +S E
Sbjct: 1081 ---------PGGSESLVFTTLSGGVGMLVPFTSRE 1106
>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1089
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 16/171 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + + ++D DT + ++ ++ + +
Sbjct: 881 IVVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKN 940
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ D A+ E L YH+GE R GS + +LP +A S T+I
Sbjct: 941 N---DAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEA---------SLIPTVI 988
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
T+ G I + + +++ L+ +Q A+ + + G H ++RS N
Sbjct: 989 FGTVNGVIGVIASLPQDKFLFLQKLQQ--ALVKVIKGVGGLSHEQWRSFSN 1037
>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 2 [Ciona intestinalis]
Length = 1142
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 16/234 (6%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L G V +C + + + LA+ + + + + + +R ++ + +
Sbjct: 860 KLTLVAEKEVKGAVFCLCQF-NGHVLAAINTSVSIYQWTTE--KELRAECSNQSNILALY 916
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L + VGD + +Y L++I D S + ++D D + ++ +
Sbjct: 917 LKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYN 976
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
+ + D L +H+G+ + R GS + + + A+ SS
Sbjct: 977 VFICQ-KDSGATTDEERSKLREAALFHVGDSINTFRHGSLVMQNVGETAV--------SS 1027
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRS 408
+ I+ T+ GSI + + + Y L ++Q RLA +GN DH +RS
Sbjct: 1028 KGHILFGTVHGSIGVITTVDEDLYAFLHSIQNRLA---KVIKSVGNIDHESWRS 1078
>gi|188583867|ref|YP_001927312.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium populi BJ001]
gi|179347365|gb|ACB82777.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium populi BJ001]
Length = 455
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 270 DPSQRLVADCVLMDVD-----TAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMG 324
D S+ + AD L V +A IAV+ +D+ + + P T A
Sbjct: 16 DASRGIPADVPLRRVSLGSLLSATARRHPERIAVVDPADKPDWSDRPAITWTYAAA---A 72
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEA 384
EI + +G ++LP +G CL S I+A G + +P+S +E LL A
Sbjct: 73 EIVERLARGLRSWRLPPGSRIGLCLPGSAESALAILAVEAAGHVACLLPVSWDEERLLAA 132
Query: 385 VQ 386
Q
Sbjct: 133 AQ 134
>gi|410930842|ref|XP_003978807.1| PREDICTED: splicing factor 3B subunit 3-like [Takifugu rubripes]
Length = 399
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 121/309 (39%), Gaps = 62/309 (20%)
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
SD + T +KA Q E G +L++ + ++ + I +
Sbjct: 97 SDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPEAI-------FGA 149
Query: 178 RLAYSTTWPGMVLAICPY----LDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRF 231
A + W +V I P LD+ L AF VC FP VG R
Sbjct: 150 PKAGAGQWASLVRLINPIQGVTLDQVQLEQNEAAFSVAVCRFPKTGDDWY--VLVGVARD 207
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYH--EDARKLEQIYCDPSQRLVADCVLMDVDTAVV 289
MI+ +VG G Y+Y KLE ++ RL + DVD
Sbjct: 208 MIL------NPKSVG----GGFIYTYRLVSGGEKLEFVH---KVRLPPNTS-DDVD---- 249
Query: 290 SDRKGSIAVLSCSDR-LEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
D G+ A+ DR L + AS + + N YH+GE +S++K + I
Sbjct: 250 EDPTGNKALW---DRGLLNGASQKAEVAMN--YHVGETVLSLQKTTLI------------ 292
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDHSEF 406
+++ +TL G I I +P +S E+++ + ++ + A P PL G DH F
Sbjct: 293 ----PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRAEFP---PLCGRDHLSF 345
Query: 407 RSRENPVRK 415
RS PV+
Sbjct: 346 RSYYFPVKN 354
>gi|254563495|ref|YP_003070590.1| hypothetical protein METDI5165 [Methylobacterium extorquens DM4]
gi|254270773|emb|CAX26778.1| hypothetical protein METDI5165 [Methylobacterium extorquens DM4]
Length = 434
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
IAV+ +D+ + + P T A EI + +G ++LP +G CL S
Sbjct: 30 IAVVDPADKPDWSDRPAITWTYAAA---AEIVERLARGLRSWRLPPGSRIGLCLPGSAES 86
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
I+A G + +P+S +E LL A Q
Sbjct: 87 ALAILAVEAAGHVACLLPVSWDEDRLLAAAQ 117
>gi|240140984|ref|YP_002965464.1| hypothetical protein MexAM1_META1p4557 [Methylobacterium extorquens
AM1]
gi|240010961|gb|ACS42187.1| hypothetical protein MexAM1_META1p4557 [Methylobacterium extorquens
AM1]
Length = 446
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
IAV+ +D+ + + P T A EI + +G ++LP +G CL S
Sbjct: 42 IAVVDPADKPDWSDRPAITWTYAAA---AEIVERLARGLRSWRLPPGSRIGLCLPGSAES 98
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
I+A G + +P+S +E LL A Q
Sbjct: 99 ALAILAVEAAGHVACLLPVSWDEDRLLAAAQ 129
>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 1 [Ciona intestinalis]
Length = 1150
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 16/234 (6%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L G V +C + + + LA+ + + + + + +R ++ + +
Sbjct: 864 KLTLVAEKEVKGAVFCLCQF-NGHVLAAINTSVSIYQWTTE--KELRAECSNQSNILALY 920
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L + VGD + +Y L++I D S + ++D D + ++ +
Sbjct: 921 LKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYN 980
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
+ + D L +H+G+ + R GS + + + A+ SS
Sbjct: 981 VFICQ-KDSGATTDEERSKLREAALFHVGDSINTFRHGSLVMQNVGETAV--------SS 1031
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRS 408
+ I+ T+ GSI + + + Y L ++Q RLA +GN DH +RS
Sbjct: 1032 KGHILFGTVHGSIGVITTVDEDLYAFLHSIQNRLA---KVIKSVGNIDHESWRS 1082
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,177,730,561
Number of Sequences: 23463169
Number of extensions: 239894468
Number of successful extensions: 504154
Number of sequences better than 100.0: 406
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 341
Number of HSP's that attempted gapping in prelim test: 503525
Number of HSP's gapped (non-prelim): 614
length of query: 415
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 270
effective length of database: 8,957,035,862
effective search space: 2418399682740
effective search space used: 2418399682740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)