Query 014962
Match_columns 415
No_of_seqs 120 out of 551
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 04:14:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ei3_A DNA damage-binding prot 100.0 3.5E-64 1.2E-68 570.8 42.5 331 1-411 722-1096(1158)
2 3zwl_B Eukaryotic translation 98.0 0.0074 2.5E-07 56.8 28.0 194 17-302 34-248 (369)
3 3jrp_A Fusion protein of prote 98.0 0.011 3.9E-07 55.8 30.9 197 17-303 13-240 (379)
4 1gxr_A ESG1, transducin-like e 98.0 0.0062 2.1E-07 56.7 26.5 233 15-371 97-333 (337)
5 3mmy_A MRNA export factor; mRN 98.0 0.0041 1.4E-07 58.5 25.4 193 16-303 40-247 (368)
6 1gxr_A ESG1, transducin-like e 97.9 0.0036 1.2E-07 58.3 24.4 189 17-301 143-335 (337)
7 4aez_A CDC20, WD repeat-contai 97.9 0.02 7E-07 55.9 30.0 239 15-378 134-383 (401)
8 1yfq_A Cell cycle arrest prote 97.9 0.0024 8.3E-08 60.0 21.7 207 13-302 54-281 (342)
9 1r5m_A SIR4-interacting protei 97.9 0.004 1.4E-07 59.9 23.6 193 17-303 151-361 (425)
10 1pgu_A Actin interacting prote 97.9 0.012 3.9E-07 60.1 28.3 238 15-302 18-282 (615)
11 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.0075 2.6E-07 59.7 25.5 111 185-303 278-391 (445)
12 3vl1_A 26S proteasome regulato 97.8 0.0011 3.8E-08 64.6 19.0 192 18-302 59-277 (420)
13 3mmy_A MRNA export factor; mRN 97.8 0.0028 9.5E-08 59.8 21.2 201 15-303 86-304 (368)
14 3gre_A Serine/threonine-protei 97.8 0.012 4.2E-07 57.7 26.6 204 13-303 109-359 (437)
15 3i2n_A WD repeat-containing pr 97.8 0.0013 4.3E-08 62.1 18.5 190 24-302 126-352 (357)
16 1k8k_C P40, ARP2/3 complex 41 97.8 0.026 9E-07 53.3 28.2 199 17-302 10-232 (372)
17 3mkq_A Coatomer beta'-subunit; 97.7 0.013 4.6E-07 62.2 27.7 195 16-302 14-216 (814)
18 3v7d_B Cell division control p 97.7 0.041 1.4E-06 54.3 31.0 217 17-303 164-381 (464)
19 1r5m_A SIR4-interacting protei 97.7 0.0098 3.3E-07 57.2 24.1 109 189-302 209-318 (425)
20 4ery_A WD repeat-containing pr 97.7 0.03 1E-06 52.3 27.5 195 17-303 25-223 (312)
21 4h5i_A Guanine nucleotide-exch 97.7 0.0072 2.5E-07 58.9 22.6 201 18-306 136-346 (365)
22 3lrv_A PRE-mRNA-splicing facto 97.7 0.0014 4.8E-08 62.9 16.8 171 9-266 117-299 (343)
23 3ow8_A WD repeat-containing pr 97.7 0.017 5.9E-07 55.1 24.4 201 9-302 115-320 (321)
24 1p22_A F-BOX/WD-repeat protein 97.6 0.059 2E-06 53.1 30.1 186 22-302 138-324 (435)
25 3bws_A Protein LP49; two-domai 97.6 0.024 8.1E-07 55.3 25.5 207 10-302 205-431 (433)
26 3zwl_B Eukaryotic translation 97.6 0.016 5.5E-07 54.5 23.4 213 9-303 109-346 (369)
27 1got_B GT-beta; complex (GTP-b 97.6 0.049 1.7E-06 52.0 30.0 197 17-303 57-257 (340)
28 1k8k_C P40, ARP2/3 complex 41 97.6 0.019 6.4E-07 54.4 23.9 202 16-303 53-274 (372)
29 4aez_A CDC20, WD repeat-contai 97.6 0.04 1.4E-06 53.8 26.9 176 44-303 113-293 (401)
30 1pby_B Quinohemoprotein amine 97.6 0.011 3.6E-07 55.2 21.6 96 8-113 23-123 (337)
31 2ynn_A Coatomer subunit beta'; 97.6 0.045 1.5E-06 51.4 25.9 193 17-302 15-216 (304)
32 4a11_B DNA excision repair pro 97.6 0.0091 3.1E-07 57.2 21.1 198 16-303 44-276 (408)
33 1ri6_A Putative isomerase YBHE 97.6 0.029 1E-06 52.2 24.1 233 8-332 76-330 (343)
34 1yfq_A Cell cycle arrest prote 97.6 0.014 4.8E-07 54.7 22.0 195 16-303 12-225 (342)
35 1sq9_A Antiviral protein SKI8; 97.6 0.024 8.1E-07 54.4 23.8 115 185-303 185-322 (397)
36 1got_B GT-beta; complex (GTP-b 97.5 0.018 6.1E-07 55.1 22.7 115 185-302 183-300 (340)
37 3vu4_A KMHSV2; beta-propeller 97.5 0.07 2.4E-06 51.4 27.2 70 232-303 199-271 (355)
38 3jro_A Fusion protein of prote 97.5 0.04 1.4E-06 59.3 27.7 197 17-303 11-238 (753)
39 3i2n_A WD repeat-containing pr 97.5 0.06 2.1E-06 50.4 26.0 114 187-303 165-291 (357)
40 1sq9_A Antiviral protein SKI8; 97.5 0.0073 2.5E-07 58.1 19.7 113 186-302 233-394 (397)
41 3jrp_A Fusion protein of prote 97.5 0.015 5E-07 55.0 21.5 119 183-303 144-287 (379)
42 2vdu_B TRNA (guanine-N(7)-)-me 97.5 0.032 1.1E-06 55.5 24.8 126 176-303 139-271 (450)
43 3ei3_B DNA damage-binding prot 97.5 0.0088 3E-07 57.6 20.1 198 16-303 74-282 (383)
44 3ow8_A WD repeat-containing pr 97.5 0.038 1.3E-06 52.7 24.2 173 44-302 102-278 (321)
45 1l0q_A Surface layer protein; 97.5 0.08 2.7E-06 50.7 31.4 201 8-302 24-232 (391)
46 1p22_A F-BOX/WD-repeat protein 97.5 0.1 3.5E-06 51.4 30.2 172 44-303 193-365 (435)
47 3f3f_A Nucleoporin SEH1; struc 97.4 0.051 1.7E-06 50.0 23.8 206 17-303 13-249 (351)
48 3odt_A Protein DOA1; ubiquitin 97.4 0.068 2.3E-06 49.0 29.1 193 17-303 20-214 (313)
49 1pgu_A Actin interacting prote 97.4 0.0094 3.2E-07 60.7 20.2 204 7-303 398-614 (615)
50 1vyh_C Platelet-activating fac 97.4 0.064 2.2E-06 52.8 25.3 229 17-370 152-406 (410)
51 3k26_A Polycomb protein EED; W 97.4 0.0046 1.6E-07 58.3 16.0 231 10-301 109-364 (366)
52 3vl1_A 26S proteasome regulato 97.4 0.039 1.3E-06 53.4 22.9 104 196-303 258-365 (420)
53 4gqb_B Methylosome protein 50; 97.4 0.038 1.3E-06 53.6 22.7 114 183-302 124-245 (344)
54 2ymu_A WD-40 repeat protein; u 97.4 0.16 5.4E-06 51.4 29.2 189 17-302 346-538 (577)
55 1erj_A Transcriptional repress 97.4 0.13 4.4E-06 50.1 27.1 193 18-302 126-340 (393)
56 3gre_A Serine/threonine-protei 97.3 0.011 3.9E-07 58.0 18.6 75 16-113 215-291 (437)
57 4gqb_B Methylosome protein 50; 97.3 0.06 2E-06 52.1 23.2 193 17-303 129-331 (344)
58 3vgz_A Uncharacterized protein 97.3 0.049 1.7E-06 51.2 22.0 211 9-301 34-260 (353)
59 1l0q_A Surface layer protein; 97.3 0.12 4.1E-06 49.5 25.1 199 9-302 67-274 (391)
60 4ery_A WD repeat-containing pr 97.2 0.13 4.5E-06 47.8 25.8 194 17-302 67-267 (312)
61 1nr0_A Actin interacting prote 97.2 0.067 2.3E-06 55.8 24.2 120 180-301 485-609 (611)
62 3sfz_A APAF-1, apoptotic pepti 97.1 0.26 8.8E-06 55.3 29.4 150 17-257 617-772 (1249)
63 4g56_B MGC81050 protein; prote 97.1 0.026 8.8E-07 54.7 18.6 193 17-303 141-343 (357)
64 3vgz_A Uncharacterized protein 97.1 0.17 5.9E-06 47.3 29.1 206 8-301 81-301 (353)
65 1vyh_C Platelet-activating fac 97.1 0.15 5.3E-06 50.1 24.6 193 17-302 110-326 (410)
66 4g56_B MGC81050 protein; prote 97.1 0.013 4.6E-07 56.7 15.9 203 17-302 44-257 (357)
67 2ymu_A WD-40 repeat protein; u 97.1 0.093 3.2E-06 53.2 22.8 187 16-299 386-576 (577)
68 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.15 5.2E-06 48.7 23.2 197 17-301 18-223 (345)
69 3bws_A Protein LP49; two-domai 97.0 0.28 9.5E-06 47.6 28.6 112 184-301 251-388 (433)
70 2hes_X YDR267CP; beta-propelle 97.0 0.25 8.6E-06 46.8 28.2 116 185-302 152-279 (330)
71 2xzm_R RACK1; ribosome, transl 97.0 0.26 9.1E-06 46.8 24.1 97 200-302 187-284 (343)
72 1erj_A Transcriptional repress 96.9 0.34 1.2E-05 47.1 30.5 199 15-303 64-287 (393)
73 4h5i_A Guanine nucleotide-exch 96.9 0.33 1.1E-05 47.0 29.1 175 182-388 172-361 (365)
74 3odt_A Protein DOA1; ubiquitin 96.9 0.24 8.1E-06 45.2 26.8 110 184-300 57-171 (313)
75 2vdu_B TRNA (guanine-N(7)-)-me 96.9 0.094 3.2E-06 52.0 20.7 106 185-292 240-373 (450)
76 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.38 1.3E-05 47.2 30.0 111 184-303 197-308 (445)
77 3dsm_A Uncharacterized protein 96.9 0.064 2.2E-06 51.4 18.8 49 9-64 77-125 (328)
78 3dw8_B Serine/threonine-protei 96.9 0.2 7E-06 48.6 22.6 117 184-302 175-314 (447)
79 4a11_B DNA excision repair pro 96.8 0.08 2.7E-06 50.4 18.8 73 16-113 100-174 (408)
80 3mkq_A Coatomer beta'-subunit; 96.8 0.19 6.4E-06 53.3 23.1 116 184-303 53-172 (814)
81 1q7f_A NHL, brain tumor CG1071 96.8 0.31 1.1E-05 44.6 22.8 112 188-303 165-280 (286)
82 3scy_A Hypothetical bacterial 96.8 0.37 1.3E-05 45.7 23.2 94 189-283 261-361 (361)
83 2aq5_A Coronin-1A; WD40 repeat 96.8 0.057 1.9E-06 52.5 17.6 200 16-302 132-341 (402)
84 2pbi_B Guanine nucleotide-bind 96.7 0.086 2.9E-06 50.8 18.6 190 19-299 158-353 (354)
85 3k26_A Polycomb protein EED; W 96.7 0.22 7.6E-06 46.5 20.8 115 185-303 68-192 (366)
86 3v7d_B Cell division control p 96.7 0.51 1.7E-05 46.3 23.9 167 44-298 290-458 (464)
87 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.48 1.6E-05 45.1 31.0 251 17-374 63-334 (345)
88 4gga_A P55CDC, cell division c 96.6 0.59 2E-05 45.7 28.1 178 44-302 125-309 (420)
89 3dwl_C Actin-related protein 2 96.6 0.069 2.4E-06 50.9 16.7 172 16-258 101-280 (377)
90 4e54_B DNA damage-binding prot 96.6 0.017 5.9E-07 57.3 12.7 200 13-303 117-327 (435)
91 1jmx_B Amine dehydrogenase; ox 96.6 0.28 9.7E-06 45.6 20.6 96 8-113 33-133 (349)
92 2aq5_A Coronin-1A; WD40 repeat 96.6 0.12 4E-06 50.2 18.3 137 185-331 175-320 (402)
93 4aow_A Guanine nucleotide-bind 96.6 0.29 1E-05 45.3 20.4 93 205-303 194-286 (340)
94 3jro_A Fusion protein of prote 96.5 0.061 2.1E-06 57.8 17.4 119 183-303 142-285 (753)
95 3lrv_A PRE-mRNA-splicing facto 96.5 0.2 6.9E-06 47.5 19.4 177 46-303 106-292 (343)
96 2xyi_A Probable histone-bindin 96.3 0.18 6E-06 49.8 18.2 210 9-303 122-353 (430)
97 3dwl_C Actin-related protein 2 96.3 0.03 1E-06 53.5 12.1 199 15-303 11-236 (377)
98 2oaj_A Protein SNI1; WD40 repe 96.3 0.13 4.4E-06 56.8 18.7 195 12-302 14-241 (902)
99 2ynn_A Coatomer subunit beta'; 96.3 0.68 2.3E-05 43.1 23.1 114 185-302 54-171 (304)
100 1ri6_A Putative isomerase YBHE 96.3 0.68 2.3E-05 42.7 27.2 229 8-330 30-282 (343)
101 2pm9_A Protein WEB1, protein t 96.2 0.047 1.6E-06 52.6 12.8 114 185-302 164-293 (416)
102 3dsm_A Uncharacterized protein 96.2 0.7 2.4E-05 43.9 21.1 105 189-301 133-251 (328)
103 2pm9_A Protein WEB1, protein t 96.2 0.071 2.4E-06 51.3 13.8 112 186-303 214-337 (416)
104 3frx_A Guanine nucleotide-bind 96.0 1 3.5E-05 42.3 26.9 192 17-303 67-267 (319)
105 2hqs_A Protein TOLB; TOLB, PAL 95.9 1.2 4.2E-05 43.8 21.9 111 186-302 266-386 (415)
106 4e54_B DNA damage-binding prot 95.7 0.12 4E-06 51.1 13.6 112 185-303 163-282 (435)
107 2oaj_A Protein SNI1; WD40 repe 95.7 1.5 5.2E-05 48.2 23.7 113 185-303 57-182 (902)
108 2xyi_A Probable histone-bindin 95.7 1.3 4.4E-05 43.5 21.0 127 176-303 118-263 (430)
109 3sfz_A APAF-1, apoptotic pepti 95.7 1.2 4.1E-05 49.9 23.0 101 197-302 810-912 (1249)
110 3dm0_A Maltose-binding peripla 95.7 2.6 8.8E-05 44.2 25.1 112 186-303 517-632 (694)
111 3hfq_A Uncharacterized protein 95.6 1.5 5.1E-05 41.1 23.5 81 188-270 241-328 (347)
112 2pm7_B Protein transport prote 95.6 1.4 4.9E-05 40.7 27.2 117 185-303 98-238 (297)
113 3ei3_B DNA damage-binding prot 95.5 1.7 5.8E-05 41.2 22.0 113 184-303 116-236 (383)
114 1nr0_A Actin interacting prote 95.5 1.5 5E-05 45.5 21.5 196 17-302 192-396 (611)
115 4gga_A P55CDC, cell division c 95.4 2.1 7.2E-05 41.6 22.4 111 183-303 273-395 (420)
116 3iz6_a 40S ribosomal protein R 95.4 0.91 3.1E-05 43.7 18.5 115 185-303 248-375 (380)
117 1pby_B Quinohemoprotein amine 95.4 1.3 4.4E-05 40.6 18.8 72 9-85 69-152 (337)
118 3q7m_A Lipoprotein YFGL, BAMB; 95.4 1 3.5E-05 43.1 18.5 96 196-301 239-335 (376)
119 3dw8_B Serine/threonine-protei 95.3 0.31 1.1E-05 47.3 14.6 77 187-266 286-378 (447)
120 1nir_A Nitrite reductase; hemo 95.2 1.8 6.1E-05 44.6 20.9 50 8-63 214-267 (543)
121 3bg1_A Protein SEC13 homolog; 95.2 2 6.7E-05 40.2 19.6 62 241-303 180-247 (316)
122 3vu4_A KMHSV2; beta-propeller 95.1 2.4 8.1E-05 40.5 20.3 118 184-303 193-336 (355)
123 2pbi_B Guanine nucleotide-bind 95.1 2.4 8.2E-05 40.4 30.8 115 185-302 195-314 (354)
124 4ggc_A P55CDC, cell division c 94.9 2.1 7.2E-05 38.9 26.7 191 21-301 31-228 (318)
125 3mbr_X Glutamine cyclotransfer 94.8 2.6 8.8E-05 39.3 23.1 166 9-265 12-183 (243)
126 3f3f_A Nucleoporin SEH1; struc 94.8 2.3 7.7E-05 38.6 25.2 115 186-303 167-337 (351)
127 3iz6_a 40S ribosomal protein R 94.8 3.1 0.00011 39.9 24.1 114 186-302 205-328 (380)
128 3dm0_A Maltose-binding peripla 94.7 2.3 7.7E-05 44.6 20.4 116 183-302 427-549 (694)
129 2iwa_A Glutamine cyclotransfer 94.6 3 0.0001 39.3 27.2 206 8-303 11-237 (266)
130 4aow_A Guanine nucleotide-bind 94.1 3.4 0.00012 37.9 23.9 112 184-302 213-336 (340)
131 3u4y_A Uncharacterized protein 93.9 3.8 0.00013 37.7 22.5 211 8-303 75-304 (331)
132 4ggc_A P55CDC, cell division c 93.9 3.5 0.00012 37.3 23.8 115 183-303 193-315 (318)
133 3ei3_A DNA damage-binding prot 93.9 11 0.00037 42.9 28.6 113 184-303 826-955 (1158)
134 2pm7_B Protein transport prote 93.7 4.1 0.00014 37.4 20.0 105 197-303 170-285 (297)
135 2xzm_R RACK1; ribosome, transl 93.4 4.7 0.00016 37.9 17.9 113 184-300 74-200 (343)
136 1q7f_A NHL, brain tumor CG1071 93.3 4.5 0.00015 36.6 24.9 108 188-300 122-235 (286)
137 2j04_A TAU60, YPL007P, hypothe 93.2 4.6 0.00016 42.4 18.6 196 16-301 86-295 (588)
138 3no2_A Uncharacterized protein 92.7 6.3 0.00022 36.5 20.7 65 10-86 29-95 (276)
139 3nol_A Glutamine cyclotransfer 92.6 6.8 0.00023 36.9 25.8 169 9-268 34-208 (262)
140 3nok_A Glutaminyl cyclase; bet 92.5 7.2 0.00025 36.8 19.8 162 9-264 46-213 (268)
141 3hfq_A Uncharacterized protein 92.3 7.1 0.00024 36.3 28.4 131 189-330 143-291 (347)
142 3mbr_X Glutamine cyclotransfer 92.2 7.3 0.00025 36.2 17.8 117 175-300 7-130 (243)
143 3q7m_A Lipoprotein YFGL, BAMB; 91.9 6.6 0.00023 37.3 16.9 100 196-301 143-256 (376)
144 4asc_A Kelch repeat and BTB do 91.8 8.3 0.00028 35.9 18.6 93 192-288 144-248 (315)
145 2vpj_A Kelch-like protein 12; 91.7 7.8 0.00027 35.6 19.1 96 191-290 154-260 (301)
146 2vpj_A Kelch-like protein 12; 91.5 8.3 0.00028 35.4 18.3 89 191-283 201-300 (301)
147 3nok_A Glutaminyl cyclase; bet 91.4 8.3 0.00028 36.4 16.4 115 176-300 42-161 (268)
148 1nir_A Nitrite reductase; hemo 91.2 15 0.0005 37.6 21.2 188 6-272 314-525 (543)
149 1jof_A Carboxy-CIS,CIS-muconat 91.1 11 0.00036 35.8 23.1 125 188-325 194-354 (365)
150 2ece_A 462AA long hypothetical 91.0 7.7 0.00026 39.5 16.8 94 8-113 176-288 (462)
151 2woz_A Kelch repeat and BTB do 90.9 5.2 0.00018 37.3 14.8 37 18-55 102-138 (318)
152 2hes_X YDR267CP; beta-propelle 90.7 11 0.00037 35.2 29.4 118 185-303 106-230 (330)
153 3nol_A Glutamine cyclotransfer 90.4 9.9 0.00034 35.7 15.9 117 175-300 29-152 (262)
154 3bg1_A Protein SEC13 homolog; 90.3 7.4 0.00025 36.1 15.2 118 184-302 55-197 (316)
155 3u4y_A Uncharacterized protein 90.2 11 0.00037 34.5 27.4 113 186-302 83-206 (331)
156 2ecf_A Dipeptidyl peptidase IV 90.0 20 0.00068 37.2 20.7 46 16-62 37-82 (741)
157 2j04_B YDR362CP, TAU91; beta p 89.8 3.1 0.00011 42.8 12.9 111 185-301 307-426 (524)
158 4asc_A Kelch repeat and BTB do 89.7 10 0.00034 35.3 15.6 95 191-289 93-202 (315)
159 1zgk_A Kelch-like ECH-associat 88.9 14 0.00049 34.1 16.4 87 191-281 210-307 (308)
160 3ii7_A Kelch-like protein 7; p 88.7 15 0.0005 33.8 15.8 95 191-289 96-206 (306)
161 2ojh_A Uncharacterized protein 88.6 12 0.00041 32.8 18.4 65 12-87 38-104 (297)
162 2j04_B YDR362CP, TAU91; beta p 88.5 13 0.00043 38.1 16.5 112 186-301 266-384 (524)
163 2ojh_A Uncharacterized protein 88.5 12 0.00042 32.8 17.4 112 185-302 40-159 (297)
164 3sjl_D Methylamine dehydrogena 88.4 21 0.00071 35.3 22.9 52 8-64 121-180 (386)
165 1xip_A Nucleoporin NUP159; bet 88.0 8.7 0.0003 38.1 14.3 104 189-303 42-155 (388)
166 2xn4_A Kelch-like protein 2; s 87.7 17 0.00057 33.4 15.7 81 206-289 124-210 (302)
167 1jmx_B Amine dehydrogenase; ox 87.7 16 0.00056 33.3 21.9 21 44-64 21-41 (349)
168 1zgk_A Kelch-like ECH-associat 87.5 16 0.00054 33.8 15.3 81 206-289 184-268 (308)
169 3ii7_A Kelch-like protein 7; p 87.4 17 0.00059 33.3 20.4 82 206-290 169-254 (306)
170 2oit_A Nucleoporin 214KDA; NH2 86.5 15 0.00053 36.2 15.4 83 9-113 86-180 (434)
171 1kb0_A Quinohemoprotein alcoho 86.5 35 0.0012 35.9 20.4 48 19-66 246-305 (677)
172 1flg_A Protein (quinoprotein e 86.4 33 0.0011 35.5 18.4 47 20-66 250-313 (582)
173 1jof_A Carboxy-CIS,CIS-muconat 85.9 24 0.0008 33.3 23.3 91 189-283 256-365 (365)
174 2woz_A Kelch repeat and BTB do 85.6 22 0.00077 32.8 18.3 80 207-289 176-259 (318)
175 2j04_A TAU60, YPL007P, hypothe 85.6 5.8 0.0002 41.7 11.9 63 17-87 131-200 (588)
176 2oiz_A Aromatic amine dehydrog 85.1 27 0.00092 33.3 23.5 55 9-64 44-101 (361)
177 2ad6_A Methanol dehydrogenase 84.5 26 0.00091 36.1 16.5 47 20-66 239-294 (571)
178 1qks_A Cytochrome CD1 nitrite 83.9 42 0.0015 34.6 21.3 50 8-63 232-285 (567)
179 3no2_A Uncharacterized protein 83.9 26 0.00089 32.1 16.8 39 43-83 14-52 (276)
180 2xn4_A Kelch-like protein 2; s 83.7 26 0.00089 32.0 19.8 82 206-290 173-258 (302)
181 2hqs_A Protein TOLB; TOLB, PAL 81.9 39 0.0013 32.7 15.9 112 186-302 178-299 (415)
182 3e5z_A Putative gluconolactona 80.7 32 0.0011 31.0 18.7 104 188-301 173-284 (296)
183 3fvz_A Peptidyl-glycine alpha- 80.3 37 0.0013 31.5 20.8 57 16-72 24-97 (329)
184 3sjl_D Methylamine dehydrogena 80.0 22 0.00076 35.1 13.2 57 8-65 71-130 (386)
185 3scy_A Hypothetical bacterial 79.9 38 0.0013 31.4 31.3 126 196-330 165-311 (361)
186 2z3z_A Dipeptidyl aminopeptida 79.2 16 0.00055 37.8 12.5 94 206-302 235-341 (706)
187 2qc5_A Streptogramin B lactona 79.2 34 0.0012 30.3 22.9 106 188-300 105-215 (300)
188 1rwi_B Serine/threonine-protei 78.1 35 0.0012 29.9 15.0 100 196-303 160-264 (270)
189 3g4e_A Regucalcin; six bladed 76.6 39 0.0013 30.8 13.2 112 184-302 51-179 (297)
190 1xip_A Nucleoporin NUP159; bet 76.5 51 0.0017 32.4 14.6 104 183-300 85-188 (388)
191 1mda_H Methylamine dehydrogena 76.2 8.1 0.00028 37.9 8.7 55 8-63 58-115 (368)
192 2p4o_A Hypothetical protein; p 74.5 52 0.0018 30.1 15.9 119 176-301 21-145 (306)
193 1rwi_B Serine/threonine-protei 74.4 44 0.0015 29.2 14.9 37 13-55 21-57 (270)
194 2ece_A 462AA long hypothetical 74.3 78 0.0027 32.1 18.8 110 205-326 227-367 (462)
195 2mad_H Methylamine dehydrogena 74.2 64 0.0022 31.0 24.5 54 9-63 60-116 (373)
196 2z2n_A Virginiamycin B lyase; 74.1 46 0.0016 29.3 24.4 105 188-301 184-293 (299)
197 3hxj_A Pyrrolo-quinoline quino 73.9 51 0.0018 29.7 15.7 100 189-300 179-281 (330)
198 2z2n_A Virginiamycin B lyase; 73.5 48 0.0016 29.2 23.7 107 188-301 100-211 (299)
199 2z3z_A Dipeptidyl aminopeptida 68.6 1.1E+02 0.0037 31.3 22.5 102 196-302 322-434 (706)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 68.0 67 0.0023 28.7 18.4 101 197-302 187-298 (314)
201 2iwa_A Glutamine cyclotransfer 67.2 81 0.0028 29.3 18.4 118 175-300 7-132 (266)
202 3frx_A Guanine nucleotide-bind 66.9 77 0.0026 29.0 27.3 114 184-303 63-185 (319)
203 3e5z_A Putative gluconolactona 66.3 73 0.0025 28.5 25.8 45 10-62 21-66 (296)
204 3hrp_A Uncharacterized protein 64.7 1.1E+02 0.0036 29.8 18.7 70 194-269 228-305 (409)
205 3fvz_A Peptidyl-glycine alpha- 63.3 74 0.0025 29.3 12.1 88 207-300 70-172 (329)
206 3v9f_A Two-component system se 61.9 1.6E+02 0.0055 30.9 15.8 108 186-300 362-475 (781)
207 2fp8_A Strictosidine synthase; 60.1 1E+02 0.0035 28.1 20.7 100 197-301 196-311 (322)
208 2dg1_A DRP35, lactonase; beta 59.6 1E+02 0.0035 27.9 23.3 48 17-72 46-93 (333)
209 3g4e_A Regucalcin; six bladed 59.6 1E+02 0.0035 27.9 25.9 70 10-88 48-117 (297)
210 4a2l_A BT_4663, two-component 58.9 1.8E+02 0.0062 30.6 16.0 107 187-300 88-199 (795)
211 2oiz_A Aromatic amine dehydrog 58.0 40 0.0014 32.0 9.3 54 8-71 298-353 (361)
212 3c75_H MADH, methylamine dehyd 57.8 16 0.00055 36.6 6.5 55 8-63 111-168 (426)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 57.5 1E+02 0.0035 27.4 11.6 83 204-292 44-135 (314)
214 2oit_A Nucleoporin 214KDA; NH2 56.8 1.2E+02 0.0042 29.5 12.8 117 183-302 89-222 (434)
215 1mda_H Methylamine dehydrogena 56.3 9.7 0.00033 37.3 4.5 57 8-69 306-362 (368)
216 2p4o_A Hypothetical protein; p 55.4 1.2E+02 0.0042 27.5 26.1 54 8-71 24-77 (306)
217 2ecf_A Dipeptidyl peptidase IV 53.7 2E+02 0.0068 29.5 20.9 20 18-37 211-230 (741)
218 2mad_H Methylamine dehydrogena 52.7 41 0.0014 32.4 8.4 47 9-60 311-357 (373)
219 1kv9_A Type II quinohemoprotei 52.1 2.2E+02 0.0077 29.5 20.6 68 20-87 234-322 (668)
220 2qc5_A Streptogramin B lactona 50.5 1.3E+02 0.0044 26.3 23.2 73 188-267 147-223 (300)
221 4a2l_A BT_4663, two-component 49.4 97 0.0033 32.7 11.4 105 189-300 133-241 (795)
222 4gq1_A NUP37; propeller, trans 49.4 87 0.003 29.7 10.1 111 186-301 136-284 (393)
223 1k3i_A Galactose oxidase precu 48.7 2.4E+02 0.0083 29.0 16.6 202 10-290 180-472 (656)
224 3ott_A Two-component system se 48.5 1.6E+02 0.0056 30.7 13.0 72 188-267 64-136 (758)
225 3c75_H MADH, methylamine dehyd 47.7 22 0.00077 35.5 5.6 47 8-60 362-409 (426)
226 1xfd_A DIP, dipeptidyl aminope 47.6 2.2E+02 0.0075 29.0 13.6 203 18-300 63-341 (723)
227 2ghs_A AGR_C_1268P; regucalcin 47.6 1.7E+02 0.0058 26.9 25.1 84 10-111 84-167 (326)
228 2uvk_A YJHT; unknown function, 47.4 1.7E+02 0.006 26.9 15.6 79 206-287 168-256 (357)
229 3hrp_A Uncharacterized protein 46.7 79 0.0027 30.7 9.5 101 196-301 141-247 (409)
230 3dr2_A Exported gluconolactona 44.3 1.8E+02 0.0061 26.2 16.2 84 206-300 215-303 (305)
231 3v65_B Low-density lipoprotein 42.6 2.3E+02 0.0078 27.0 12.1 100 199-302 89-189 (386)
232 1n7d_A LDL receptor, low-densi 41.5 55 0.0019 34.6 7.8 66 233-300 544-611 (699)
233 1npe_A Nidogen, entactin; glyc 40.8 1.9E+02 0.0064 25.4 13.2 102 198-302 2-109 (267)
234 3p5b_L Low density lipoprotein 38.9 2.7E+02 0.0093 26.7 22.2 102 194-300 211-317 (400)
235 3pe7_A Oligogalacturonate lyas 38.8 2.3E+02 0.0079 25.9 16.5 93 206-301 168-271 (388)
236 3o4h_A Acylamino-acid-releasin 36.4 3.3E+02 0.011 26.9 19.8 101 195-301 159-274 (582)
237 3v9f_A Two-component system se 35.6 4E+02 0.014 27.7 18.4 76 188-269 116-200 (781)
238 1npe_A Nidogen, entactin; glyc 35.2 2.3E+02 0.0078 24.8 22.6 97 196-300 133-235 (267)
239 3dr2_A Exported gluconolactona 34.9 2.5E+02 0.0086 25.2 14.2 38 9-52 37-75 (305)
240 2fp8_A Strictosidine synthase; 33.5 2.7E+02 0.0093 25.2 11.3 108 188-302 81-215 (322)
241 3iuj_A Prolyl endopeptidase; h 33.3 4.2E+02 0.014 27.3 19.9 36 21-58 134-169 (693)
242 1k32_A Tricorn protease; prote 33.1 5E+02 0.017 28.1 17.9 93 187-284 379-482 (1045)
243 1yiq_A Quinohemoprotein alcoho 32.0 4.6E+02 0.016 27.3 20.9 46 20-65 239-296 (689)
244 2uvk_A YJHT; unknown function, 31.4 2.2E+02 0.0076 26.2 9.7 49 253-301 169-224 (357)
245 3p5b_L Low density lipoprotein 31.2 3.6E+02 0.012 25.8 12.9 59 199-261 85-143 (400)
246 1k32_A Tricorn protease; prote 30.5 4.7E+02 0.016 28.4 13.4 120 176-301 4-141 (1045)
247 1qks_A Cytochrome CD1 nitrite 29.8 4.6E+02 0.016 26.7 21.8 51 6-62 332-382 (567)
248 3sov_A LRP-6, low-density lipo 28.4 3.6E+02 0.012 25.0 20.4 101 194-300 131-235 (318)
249 3q6k_A 43.2 kDa salivary prote 28.1 2E+02 0.0067 28.2 8.7 58 233-300 279-341 (381)
250 3ott_A Two-component system se 26.9 5.4E+02 0.019 26.6 13.3 74 187-267 146-226 (758)
251 1ijq_A LDL receptor, low-densi 25.9 3.8E+02 0.013 24.4 12.2 59 199-261 3-61 (316)
252 2ghs_A AGR_C_1268P; regucalcin 25.1 3.9E+02 0.013 24.3 14.2 110 185-302 88-209 (326)
253 2p9w_A MAL S 1 allergenic prot 25.0 4.6E+02 0.016 25.1 12.8 71 231-302 137-214 (334)
254 1ijq_A LDL receptor, low-densi 23.9 4.2E+02 0.014 24.2 22.4 105 189-300 122-235 (316)
255 3amr_A 3-phytase; beta-propell 22.6 2.6E+02 0.009 27.1 8.4 73 7-86 171-250 (355)
256 3m0c_C LDL receptor, low-densi 21.9 6.1E+02 0.021 27.1 12.0 57 200-260 398-454 (791)
257 1w6s_A Methanol dehydrogenase 21.0 6.8E+02 0.023 25.6 18.5 47 20-66 245-300 (599)
258 3o4h_A Acylamino-acid-releasin 20.8 6E+02 0.021 24.9 13.0 93 203-302 129-226 (582)
259 4a5s_A Dipeptidyl peptidase 4 20.8 7E+02 0.024 25.6 17.1 79 18-113 19-100 (740)
260 3m0c_C LDL receptor, low-densi 20.7 7.9E+02 0.027 26.2 22.2 106 189-300 516-629 (791)
No 1
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=100.00 E-value=3.5e-64 Score=570.80 Aligned_cols=331 Identities=20% Similarity=0.292 Sum_probs=292.8
Q ss_pred CCcCCceeEEEEeCCCccCEEEEecCCCEEEEEEEeeCC-----------------------------------------
Q 014962 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNN----------------------------------------- 39 (415)
Q Consensus 1 ~~~~~~~~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~----------------------------------------- 39 (415)
|+++++||+++|||++|||||+|||++++|+|++++.+.
T Consensus 722 i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 801 (1158)
T 3ei3_A 722 IDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFG 801 (1158)
T ss_dssp ECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CC
T ss_pred ecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcC
Confidence 356799999999999999999999999999999876420
Q ss_pred -CcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECC--eeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecc
Q 014962 40 -DTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGH--EQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQ 116 (415)
Q Consensus 40 -~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~--~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~ 116 (415)
..|+|+|+|+||.+|+++++|+|++||.++|++.|.|.+ ++||||||++.. ++|+++++|||++|++..
T Consensus 802 ~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~------~~e~~~~~Gri~vf~v~~-- 873 (1158)
T 3ei3_A 802 EEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVY------PEEAEPKQGRIVVFQYSD-- 873 (1158)
T ss_dssp CEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECC------TTCSSCCCEEEEEEEEET--
T ss_pred CceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecC------CCCCCCCceEEEEEEEEC--
Confidence 137899999999999999999999999999999999985 589999999875 688999999999999992
Q ss_pred cCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEEEEecCCceEEEeeeC
Q 014962 117 NSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYL 196 (415)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~~ 196 (415)
.||+++|+++++|+|+|||+|+
T Consensus 874 ----------------------------------------------------------~kL~lv~~~~v~g~v~al~~~~ 895 (1158)
T 3ei3_A 874 ----------------------------------------------------------GKLQTVAEKEVKGAVYSMVEFN 895 (1158)
T ss_dssp ----------------------------------------------------------TEEEEEEEEEESSCEEEEEEET
T ss_pred ----------------------------------------------------------CEEEEEEEEEcCCcCEEEeeeC
Confidence 3899999999999999999999
Q ss_pred CceEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCccee
Q 014962 197 DRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV 276 (415)
Q Consensus 197 g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~v 276 (415)
|+ ||+|+|++|++|+|+++ ++|+..+.....+.+++|++.||+|+|||+|+|++|++|++++++|+++|||+.++|+
T Consensus 896 g~-Lla~ig~~l~vy~l~~~--~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~v 972 (1158)
T 3ei3_A 896 GK-LLASINSTVRLYEWTTE--KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 972 (1158)
T ss_dssp TE-EEEEETTEEEEEEECTT--SCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCE
T ss_pred CE-EEEEcCCEEEEEECCCC--ceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccE
Confidence 98 99999999999999973 4677433222233477999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCeEEEeCCCCcEEEEecCCCcCCCCCCCCccceeeeeecCccccEEEeeceeccCCCCCccccccccCCCCC
Q 014962 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQ 356 (415)
Q Consensus 277 ta~~~Ld~d~~l~aD~~gNl~vl~~~~~~~~~~~~~~kL~~~~~fhlGd~Vt~~~~gsl~~~~~~~~~~~~~~~~~~~~~ 356 (415)
+|++|||+++++++|++|||++++++++..++. +.++|+..++||+||.||+|+++++.+..+.+.. ...+
T Consensus 973 ta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~-~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~--------~~~~ 1043 (1158)
T 3ei3_A 973 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDE-ERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETS--------TPTQ 1043 (1158)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEEECTTCCSTT-GGGBEEEEEEEECSSCEEEEEECCSCCC---------------CEE
T ss_pred EEEEEEccCcEEEEcCCCcEEEEecCCCCCCcc-ccceeeeEEEEeCCCcEeeEEeeeeecCCCcccc--------cccc
Confidence 999999999999999999999999998655433 3479999999999999999999999743321111 1346
Q ss_pred ceEEEEeCCcceEEEEecChHHHHHHHHHHHHHhcCCCCCCCCCCCcccccceec
Q 014962 357 TTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411 (415)
Q Consensus 357 ~~ily~T~~GsIG~l~pl~~~~~~~L~~LQ~~l~~~~~~~~~~gl~h~~~Rs~~~ 411 (415)
++++|||++|+||+|+||++++|+||..||++|++ .++++||+||++||+|++
T Consensus 1044 ~~il~~T~~GsIg~l~pl~~~~~~~L~~Lq~~l~~--~~~~~~gl~~~~~Rs~~~ 1096 (1158)
T 3ei3_A 1044 GSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNK--VIKSVGKIEHSFWRSFHT 1096 (1158)
T ss_dssp EEEEEEETTSCEEEEEEECHHHHHHHHHHHHHHHH--HSCCTTSCCHHHHHSEEC
T ss_pred ceEEEEecCCEEEEEEEcCHHHHHHHHHHHHHHHh--hCCCCcCCCHHHhhCeec
Confidence 78999999999999999999999999999999999 889999999999999999
No 2
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.0074 Score=56.80 Aligned_cols=194 Identities=15% Similarity=0.145 Sum_probs=120.5
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++++..+ ..|++.|..+++.+..+.-. ...+.++ .+. +..+|+.|..
T Consensus 34 ~v~~~~~s~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~h-~~~v~~~---~~~~~~~~l~s~~~-------- 94 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKD-------SSASVWYSLNGERLGTLDGH-TGTIWSI---DVDCFTKYCVTGSA-------- 94 (369)
T ss_dssp CEEEEEECTTSCEEEEEESS-------SCEEEEETTTCCEEEEECCC-SSCEEEE---EECTTSSEEEEEET--------
T ss_pred eEEEEEEcCCCCEEEEEeCC-------CEEEEEeCCCchhhhhhhhc-CCcEEEE---EEcCCCCEEEEEeC--------
Confidence 67788999998887776533 35999999999888766533 3344444 343 4578887744
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.|.+|++.. | .
T Consensus 95 --------dg~i~iwd~~~---------------------------------------------------~--------~ 107 (369)
T 3zwl_B 95 --------DYSIKLWDVSN---------------------------------------------------G--------Q 107 (369)
T ss_dssp --------TTEEEEEETTT---------------------------------------------------C--------C
T ss_pred --------CCeEEEEECCC---------------------------------------------------C--------c
Confidence 47889988772 0 0
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEEeC------CeEEEEeeCCCCc-cc--------eeeeeeecc--ceEEEEEE
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLASAG------NAFYVCGFPNDNP-QR--------VRRFAVGRT--RFMIMLLT 237 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~vg------~~l~v~~~~~~~~-~~--------L~~~a~~~~--~~~i~sI~ 237 (415)
.+. .....++|.+++-. .|++|+++.. ..|.+|++..... .. +........ ......+.
T Consensus 108 ~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 108 CVA---TWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp EEE---EEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred EEE---EeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 122 22367788888744 4564666555 5799999975321 01 111111111 33344445
Q ss_pred EeCCEEEEeecCCcEEEEEEEccC-CeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecC
Q 014962 238 AHFTRIAVGDCRDGILFYSYHEDA-RKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 238 ~~~n~IlVGD~~~Sv~ll~y~~~~-~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~ 302 (415)
..++++++|+.-..+.++. ... ......-. .....++++.+-. ...++.+..+|.|.++...
T Consensus 185 ~~~~~l~~~~~dg~i~i~d--~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 185 TKGKYIIAGHKDGKISKYD--VSNNYEYVDSID-LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp GGGCEEEEEETTSEEEEEE--TTTTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEcCCCEEEEEE--CCCCcEeEEEEe-cCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 5678999998888776654 443 33322222 2455678888764 4478888999999999854
No 3
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.011 Score=55.81 Aligned_cols=197 Identities=8% Similarity=0.065 Sum_probs=120.9
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCC--CCcEEEEEeCCCC-CeEEEEEEEEEC-C--eeEEEEeeecCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPL--SGSVLSSFKLELG-ETGKSMELVRVG-H--EQVLVVGTSLSS 90 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~--t~~~i~s~~l~~~-E~~~si~~~~l~-~--~~~lvVGT~~~~ 90 (415)
..+.++++|+.+.++++..+ ..|++.|.. +++.+.. +..+ ..+.++ .+. + ..+|+.|..
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~--~~~h~~~v~~~---~~~~~~~~~~l~s~~~--- 77 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSD-------KTIKIFEVEGETHKLIDT--LTGHEGPVWRV---DWAHPKFGTILASCSY--- 77 (379)
T ss_dssp CEEEEEECSSSSEEEEEETT-------SCEEEEEEETTEEEEEEE--ECCCSSCEEEE---EECCGGGCSEEEEEET---
T ss_pred cEEEEEEcCCCCEEEEEECC-------CcEEEEecCCCcceeeeE--ecCCCCcEEEE---EeCCCCCCCEEEEecc---
Confidence 56788999998888776533 347887765 3444443 3332 334443 342 2 578887754
Q ss_pred CCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccc
Q 014962 91 GPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLE 170 (415)
Q Consensus 91 ~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 170 (415)
.|.|.+|++..
T Consensus 78 -------------dg~v~iwd~~~-------------------------------------------------------- 88 (379)
T 3jrp_A 78 -------------DGKVLIWKEEN-------------------------------------------------------- 88 (379)
T ss_dssp -------------TSCEEEEEEET--------------------------------------------------------
T ss_pred -------------CCEEEEEEcCC--------------------------------------------------------
Confidence 47899999882
Q ss_pred ccccceEEEEE-EEecCCceEEEeeeC---CceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEE-------
Q 014962 171 ETETWQLRLAY-STTWPGMVLAICPYL---DRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA------- 238 (415)
Q Consensus 171 ~~~~~~L~l~~-~~~~~g~V~al~~~~---g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~------- 238 (415)
.+...+. .....++|.+++-.. |.+|+++ ....|.+|++..... ............+.++..
T Consensus 89 ----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 89 ----GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp ----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC--CCEEEEECCTTCEEEEEECCCC---
T ss_pred ----CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc--eeeEEecCCCCceEEEEEcCccccc
Confidence 0222222 233567888888543 5535544 455699999986321 111122222223444443
Q ss_pred --------eCCEEEEeecCCcEEEEEEEccCCeEEEEe-cCCCcceeEEEEeeeC----CeEEEeCCCCcEEEEecCC
Q 014962 239 --------HFTRIAVGDCRDGILFYSYHEDARKLEQIY-CDPSQRLVADCVLMDV----DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 239 --------~~n~IlVGD~~~Sv~ll~y~~~~~~L~~va-rD~~~~~vta~~~Ld~----d~~l~aD~~gNl~vl~~~~ 303 (415)
.++++++|..-..+.++..+........+. -......++++.+-.+ ..++.+..+|.|.++....
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 368899999999998888776554433332 2234567888888644 4788889999999998654
No 4
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.97 E-value=0.0062 Score=56.69 Aligned_cols=233 Identities=9% Similarity=0.008 Sum_probs=137.8
Q ss_pred CCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCC-CeEEEEEEEEECCeeEEEEeeecCCCCC
Q 014962 15 GGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELG-ETGKSMELVRVGHEQVLVVGTSLSSGPA 93 (415)
Q Consensus 15 ~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~-E~~~si~~~~l~~~~~lvVGT~~~~~~~ 93 (415)
....+.++++|+.+.++++..+ ..|++.|..+.+......+... ..+.++.. ..+..++++|+.
T Consensus 97 ~~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~------ 161 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTLIVGGEA-------STLSIWDLAAPTPRIKAELTSSAPACYALAI--SPDSKVCFSCCS------ 161 (337)
T ss_dssp TSBEEEEEECTTSSEEEEEESS-------SEEEEEECCCC--EEEEEEECSSSCEEEEEE--CTTSSEEEEEET------
T ss_pred CCcEEEEEEcCCCCEEEEEcCC-------CcEEEEECCCCCcceeeecccCCCceEEEEE--CCCCCEEEEEeC------
Confidence 3467788999988877776532 4699999888773333333332 33444332 124578887754
Q ss_pred CCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccc
Q 014962 94 IMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETE 173 (415)
Q Consensus 94 ~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 173 (415)
.|.|.+|++..
T Consensus 162 ----------dg~v~~~d~~~----------------------------------------------------------- 172 (337)
T 1gxr_A 162 ----------DGNIAVWDLHN----------------------------------------------------------- 172 (337)
T ss_dssp ----------TSCEEEEETTT-----------------------------------------------------------
T ss_pred ----------CCcEEEEeCCC-----------------------------------------------------------
Confidence 46788887762
Q ss_pred cceEEEEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCc
Q 014962 174 TWQLRLAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDG 251 (415)
Q Consensus 174 ~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~S 251 (415)
+..+..+ ....++|.+++-- +|.+|+++ ..+.|++|++... +.+... ....+.....+...++++++|..-..
T Consensus 173 ~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 173 QTLVRQF--QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--RQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp TEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEE-ECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred Cceeeee--ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--ceEeee-cCCCceEEEEECCCCCEEEEEcCCCc
Confidence 0011111 2246778887744 45545544 3557999999762 333332 22333344444456789999998888
Q ss_pred EEEEEEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCCCcCCCCCCCCccceeeeeecCccccEE
Q 014962 252 ILFYSYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSI 330 (415)
Q Consensus 252 v~ll~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~~~~~~~~~~~kL~~~~~fhlGd~Vt~~ 330 (415)
+.++. ........+ ......++++.+-. ...++.+..+|.|.+++.... ..+ ..+..+..|+++
T Consensus 248 i~~~~--~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--------~~~---~~~~~~~~v~~~ 312 (337)
T 1gxr_A 248 VEVLH--VNKPDKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG--------ASI---FQSKESSSVLSC 312 (337)
T ss_dssp EEEEE--TTSSCEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEE---EEEECSSCEEEE
T ss_pred EEEEE--CCCCCeEEE--cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC--------eEE---EEecCCCcEEEE
Confidence 86654 444444433 23456788888864 447888888999999986531 122 222334556655
Q ss_pred EeeceeccCCCCCccccccccCCCCCceEEEEeCCcceEEE
Q 014962 331 RKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIF 371 (415)
Q Consensus 331 ~~gsl~~~~~~~~~~~~~~~~~~~~~~~ily~T~~GsIG~l 371 (415)
. +. .....++.++.+|.|-+.
T Consensus 313 ~---~s-----------------~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 313 D---IS-----------------VDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp E---EC-----------------TTSCEEEEEETTSCEEEE
T ss_pred E---EC-----------------CCCCEEEEecCCCeEEEE
Confidence 3 21 123568888999988754
No 5
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.96 E-value=0.0041 Score=58.55 Aligned_cols=193 Identities=8% Similarity=0.057 Sum_probs=120.6
Q ss_pred CccCEEEEecCC---CEEEEEEEeeCCCcceeeEEEEeCCC-CcEE-EEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecC
Q 014962 16 GTPKKVLYHSES---RLLIVMRTELNNDTCSSDICCVDPLS-GSVL-SSFKLELGETGKSMELVRVG-HEQVLVVGTSLS 89 (415)
Q Consensus 16 ~tp~~I~y~~~~---~~~~v~~~~~~~~~~~s~i~l~d~~t-~~~i-~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~ 89 (415)
.....|+++|+. +.++.+..+ ..|++.|..+ ...+ ..+. .....+.++ .+. +..+|+.|+.
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~-~h~~~v~~~---~~~~~~~~l~s~~~-- 106 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWA-------NDVRCWEVQDSGQTIPKAQQ-MHTGPVLDV---CWSDDGSKVFTASC-- 106 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETT-------SEEEEEEECTTSCEEEEEEE-ECSSCEEEE---EECTTSSEEEEEET--
T ss_pred CceEEEEEcCCCCCceEEEEECCC-------CcEEEEEcCCCCceeEEEec-cccCCEEEE---EECcCCCEEEEEcC--
Confidence 366889999985 555554322 3589999876 4444 3322 223344444 343 5578887754
Q ss_pred CCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccc
Q 014962 90 SGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKL 169 (415)
Q Consensus 90 ~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~ 169 (415)
.|.|.+|++..
T Consensus 107 --------------dg~v~iwd~~~------------------------------------------------------- 117 (368)
T 3mmy_A 107 --------------DKTAKMWDLSS------------------------------------------------------- 117 (368)
T ss_dssp --------------TSEEEEEETTT-------------------------------------------------------
T ss_pred --------------CCcEEEEEcCC-------------------------------------------------------
Confidence 47888888762
Q ss_pred cccccceEEEEEEEecCCceEEEee---eCCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE
Q 014962 170 EETETWQLRLAYSTTWPGMVLAICP---YLDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV 245 (415)
Q Consensus 170 ~~~~~~~L~l~~~~~~~g~V~al~~---~~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV 245 (415)
.++. ......++|.+++- -.|.+|+++. .+.|++|++... +.+.... .+..+..+....+.+++
T Consensus 118 -----~~~~--~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 118 -----NQAI--QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS--NPMMVLQ---LPERCYCADVIYPMAVV 185 (368)
T ss_dssp -----TEEE--EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS--SCSEEEE---CSSCEEEEEEETTEEEE
T ss_pred -----CCce--eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC--cEEEEEe---cCCCceEEEecCCeeEE
Confidence 0111 12446788999984 3566344443 467999999863 3343322 23357777888999999
Q ss_pred eecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC-C----eEEEeCCCCcEEEEecCC
Q 014962 246 GDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-D----TAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 246 GD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d----~~l~aD~~gNl~vl~~~~ 303 (415)
+..-..+.++..+.....+..+. ........++.+... . .++.+..+|.+.++....
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~ 247 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIE-SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP 247 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECC-CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSC
T ss_pred EeCCCcEEEEEeccccchhhhcc-ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCC
Confidence 99999998887765544444433 334444555554422 2 389999999999998754
No 6
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.95 E-value=0.0036 Score=58.27 Aligned_cols=189 Identities=6% Similarity=0.023 Sum_probs=117.5
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++++..+ ..|++.|..+++.+..+.-. ...+.++ .+. +..++++|+.
T Consensus 143 ~i~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~-~~~i~~~---~~~~~~~~l~~~~~-------- 203 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGH-TDGASCI---DISNDGTKLWTGGL-------- 203 (337)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCC-SSCEEEE---EECTTSSEEEEEET--------
T ss_pred ceEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeeeeecc-cCceEEE---EECCCCCEEEEEec--------
Confidence 45678888887777766532 35999999998887766532 3344433 343 4578887754
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.|.+|++.. .
T Consensus 204 --------dg~i~~~d~~~------------------------------------------------------------~ 215 (337)
T 1gxr_A 204 --------DNTVRSWDLRE------------------------------------------------------------G 215 (337)
T ss_dssp --------TSEEEEEETTT------------------------------------------------------------T
T ss_pred --------CCcEEEEECCC------------------------------------------------------------C
Confidence 46888888762 0
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEE
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGIL 253 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ 253 (415)
+ .+......+++.+++-- .|++|+++. .+.|++|++... + +.....+..+.........++++++|..-..+.
T Consensus 216 ~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 216 R--QLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP--D-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp E--EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS--C-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred c--eEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--C-eEEEcCCccceeEEEECCCCCEEEEecCCCcEE
Confidence 1 12223567888888743 456455554 466999999863 2 222222233333333344578899998877776
Q ss_pred EEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEec
Q 014962 254 FYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 254 ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~ 301 (415)
++ +...++..... .....++++.+-.+ ..++.+..+|.|.++++
T Consensus 291 ~~--~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 291 AW--RTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EE--ETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EE--ECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 55 44444443222 24556888887644 47788899999998874
No 7
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.90 E-value=0.02 Score=55.88 Aligned_cols=239 Identities=9% Similarity=0.024 Sum_probs=137.7
Q ss_pred CCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCC
Q 014962 15 GGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 15 ~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~ 94 (415)
......++++|+.+.++++..+ +.|++.|..+++.+..+. .....+.++.. +..+++.|..
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~-~~~~~v~~~~~----~~~~l~~~~~------- 194 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGN-------GLVDIYDVESQTKLRTMA-GHQARVGCLSW----NRHVLSSGSR------- 194 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEEEC-CCSSCEEEEEE----ETTEEEEEET-------
T ss_pred CCCEEEEEECCCCCEEEEECCC-------CeEEEEECcCCeEEEEec-CCCCceEEEEE----CCCEEEEEcC-------
Confidence 3467789999988887776533 359999999998887766 33445555543 4467777754
Q ss_pred CCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccccc
Q 014962 95 MPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETET 174 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 174 (415)
.|.|.+|++.. . +
T Consensus 195 ---------dg~i~i~d~~~---------------------------------------------~-------------~ 207 (401)
T 4aez_A 195 ---------SGAIHHHDVRI---------------------------------------------A-------------N 207 (401)
T ss_dssp ---------TSEEEEEETTS---------------------------------------------S-------------S
T ss_pred ---------CCCEEEEeccc---------------------------------------------C-------------c
Confidence 47888888872 0 0
Q ss_pred ceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--eC-CEEEEee--
Q 014962 175 WQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--HF-TRIAVGD-- 247 (415)
Q Consensus 175 ~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~~-n~IlVGD-- 247 (415)
..+..+ ....++|.+++-. .|.+|+++. .+.|.+|++... +.+.....+.. .+.++.. .+ ++++.|.
T Consensus 208 ~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 208 HQIGTL--QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--IPKFTKTNHNA--AVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp CEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--SEEEEECCCSS--CCCEEEECTTSTTEEEEECCT
T ss_pred ceeeEE--cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--CccEEecCCcc--eEEEEEECCCCCCEEEEecCC
Confidence 122222 3457888888744 456455544 367999999862 22333222232 3444444 33 4555554
Q ss_pred cCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCC-eEEE--eCCCCcEEEEecCCCcCCCCCCCCccceeeeee-c
Q 014962 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD-TAVV--SDRKGSIAVLSCSDRLEDNASPECNLTPNCAYH-M 323 (415)
Q Consensus 248 ~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d-~~l~--aD~~gNl~vl~~~~~~~~~~~~~~kL~~~~~fh-l 323 (415)
.-..+.+ |+...++....-. ....++++.+-.++ .+++ +..+|.|.++.+... .+.....+. .
T Consensus 282 ~d~~i~i--~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~---------~~~~~~~~~~h 348 (401)
T 4aez_A 282 MDKQIHF--WNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS---------GLTKQVDIPAH 348 (401)
T ss_dssp TTCEEEE--EETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT---------EEEEEEEEECC
T ss_pred CCCEEEE--EECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc---------cceeEEEecCC
Confidence 4445544 5554444333222 34568888876444 5665 457999999986541 222222221 1
Q ss_pred CccccEEEeeceeccCCCCCccccccccCCCCCceEEEEeCCcceEEEEecChHH
Q 014962 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378 (415)
Q Consensus 324 Gd~Vt~~~~gsl~~~~~~~~~~~~~~~~~~~~~~~ily~T~~GsIG~l~pl~~~~ 378 (415)
...|+++. +. .....++.++.+|.|-+.-.-+.+.
T Consensus 349 ~~~v~~~~---~s-----------------~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 349 DTRVLYSA---LS-----------------PDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp SSCCCEEE---EC-----------------TTSSEEEEECTTSEEEEEECCC---
T ss_pred CCCEEEEE---EC-----------------CCCCEEEEEeCCCcEEEEECCCCcc
Confidence 23455542 21 1235688889999988775554443
No 8
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.87 E-value=0.0024 Score=60.04 Aligned_cols=207 Identities=10% Similarity=0.016 Sum_probs=122.1
Q ss_pred eCCCccCEEEEecCCC-EEEEEEEeeCCCcceeeEEEEeC-CCCcEEEEEeCC---CCCeEEEEEEEEECCeeEEEEeee
Q 014962 13 HLGGTPKKVLYHSESR-LLIVMRTELNNDTCSSDICCVDP-LSGSVLSSFKLE---LGETGKSMELVRVGHEQVLVVGTS 87 (415)
Q Consensus 13 ~L~~tp~~I~y~~~~~-~~~v~~~~~~~~~~~s~i~l~d~-~t~~~i~s~~l~---~~E~~~si~~~~l~~~~~lvVGT~ 87 (415)
........++++|+.+ .++++..+ ..|++.|. .+.+. ..+. ....+.++.... ..+++.|+.
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~---~~~l~s~~~ 120 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQ-------GEILKVDLIGSPSF---QALTNNEANLGICRICKYG---DDKLIAASW 120 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETT-------SCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET---TTEEEEEET
T ss_pred ecCCceEEEEECCCCCcEEEEEcCC-------CeEEEEEeccCCce---EeccccCCCCceEEEEeCC---CCEEEEEcC
Confidence 4445778899999888 66665532 35999998 77765 2333 345566665433 567776644
Q ss_pred cCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCc
Q 014962 88 LSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGI 167 (415)
Q Consensus 88 ~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 167 (415)
.|.|.+|++..... + ..
T Consensus 121 ----------------d~~i~iwd~~~~~~------------------------------------------~-----~~ 137 (342)
T 1yfq_A 121 ----------------DGLIEVIDPRNYGD------------------------------------------G-----VI 137 (342)
T ss_dssp ----------------TSEEEEECHHHHTT------------------------------------------B-----CE
T ss_pred ----------------CCeEEEEccccccc------------------------------------------c-----cc
Confidence 46888888772000 0 00
Q ss_pred cccccccceEEEEEEEecCCceEEEeeeCCceEEEE-eCCeEEEEeeCC-CCccceeeeeeeccceEEEEEEE-eCCEEE
Q 014962 168 KLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLAS-AGNAFYVCGFPN-DNPQRVRRFAVGRTRFMIMLLTA-HFTRIA 244 (415)
Q Consensus 168 ~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~-~~~~~L~~~a~~~~~~~i~sI~~-~~n~Il 244 (415)
....+.+......+.|++++-..+. |+++ ....|.+|++.. ..............+.....+.. .+++++
T Consensus 138 ------~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~ 210 (342)
T 1yfq_A 138 ------AVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYA 210 (342)
T ss_dssp ------EEEESCSSSSSSCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEE
T ss_pred ------cccCCeeeEEeeCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEE
Confidence 0000001112256778888866666 5555 455899999975 32111112122222333333444 578999
Q ss_pred EeecCCcEEEEEEEcc-----CCeEEEEecCCC-------cceeEEEEeee-CCeEEEeCCCCcEEEEecC
Q 014962 245 VGDCRDGILFYSYHED-----ARKLEQIYCDPS-------QRLVADCVLMD-VDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 245 VGD~~~Sv~ll~y~~~-----~~~L~~varD~~-------~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~ 302 (415)
+|..-..+.++.|+.. ......+..... ...++++.+-. ...++.+..+|.|.++...
T Consensus 211 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 211 CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 9999889988888775 132333322211 33788888764 4578888999999999864
No 9
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.004 Score=59.93 Aligned_cols=193 Identities=13% Similarity=0.112 Sum_probs=114.8
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCe--------------EEEEEEEEECCeeEE
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGET--------------GKSMELVRVGHEQVL 82 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~--------------~~si~~~~l~~~~~l 82 (415)
....++++|+.+.++.+..+ ..|++.|..+++.+..+....... +.++. +..+..+
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 220 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDVE-------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVE---WVDDDKF 220 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT-------CCEEEEETTTTEEEEEECCC---------------CCCBSCCE---EEETTEE
T ss_pred cEEEEEECCCCCEEEEEecC-------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEE---EcCCCEE
Confidence 56678888887776655432 359999999998888777655431 22222 2223456
Q ss_pred EEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCC
Q 014962 83 VVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDA 162 (415)
Q Consensus 83 vVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 162 (415)
++|+. .|.|++|++...
T Consensus 221 ~~~~~----------------~g~i~~~d~~~~----------------------------------------------- 237 (425)
T 1r5m_A 221 VIPGP----------------KGAIFVYQITEK----------------------------------------------- 237 (425)
T ss_dssp EEECG----------------GGCEEEEETTCS-----------------------------------------------
T ss_pred EEEcC----------------CCeEEEEEcCCC-----------------------------------------------
Confidence 66644 578888887720
Q ss_pred CCCCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeC
Q 014962 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240 (415)
Q Consensus 163 ~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~ 240 (415)
. .+..+ ....++|.+++-- .|++|+++. ...|.+|++... +.+.....+.. .+.++....
T Consensus 238 ----~--------~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~--~i~~~~~~~ 299 (425)
T 1r5m_A 238 ----T--------PTGKL--IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG--NSQNCFYGHSQ--SIVSASWVG 299 (425)
T ss_dssp ----S--------CSEEE--CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB--SCSEEECCCSS--CEEEEEEET
T ss_pred ----c--------eeeee--ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC--ccceEecCCCc--cEEEEEECC
Confidence 0 11111 2346778887744 455455554 466999999762 22333222222 455555433
Q ss_pred C-EEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 241 T-RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 241 n-~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
+ ++++|..-..+.++ +...++....-. .....++++.+-. ...++++..+|.|.++....
T Consensus 300 ~~~l~~~~~d~~i~i~--d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 300 DDKVISCSMDGSVRLW--SLKQNTLLALSI-VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp TTEEEEEETTSEEEEE--ETTTTEEEEEEE-CTTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred CCEEEEEeCCCcEEEE--ECCCCcEeEecc-cCCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 2 88888877777554 544454443333 2345777887764 44788888999999998654
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.86 E-value=0.012 Score=60.06 Aligned_cols=238 Identities=10% Similarity=0.003 Sum_probs=124.1
Q ss_pred CCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCC----cEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCC
Q 014962 15 GGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSG----SVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSS 90 (415)
Q Consensus 15 ~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~----~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~ 90 (415)
...+..++++|+.+.++++. ...|++.|..++ +.+..+.-.....+.++..-...+..+|++|..
T Consensus 18 ~~~v~~~~~spdg~~l~~~~--------~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~--- 86 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC--------GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE--- 86 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE--------TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET---
T ss_pred cCceeEEEECCCCCEEEEec--------CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC---
Confidence 45778899999999888876 136999999888 666655433332266655431115578888754
Q ss_pred CCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeec-ccccccccCcCCCCCCCCCCCCccc
Q 014962 91 GPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVG-YATEQLSSSSLCSSPDDASCDGIKL 169 (415)
Q Consensus 91 ~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~g~~~ 169 (415)
.|.|.+|++....... .+. .+.+. .......-..+.-.|+ |..+
T Consensus 87 -------------dg~v~vw~~~~~~~~~-------------~~~----~~~~~~~~~~~~~v~~~~~s~~-----~~~l 131 (615)
T 1pgu_A 87 -------------SGKVIVWGWTFDKESN-------------SVE----VNVKSEFQVLAGPISDISWDFE-----GRRL 131 (615)
T ss_dssp -------------TSEEEEEEEEEEGGGT-------------EEE----EEEEEEEECCSSCEEEEEECTT-----SSEE
T ss_pred -------------CCEEEEEeCCCCcccc-------------ccc----ccccchhhcccccEEEEEEeCC-----CCEE
Confidence 4788888886200000 000 00000 0000000000011122 1100
Q ss_pred cccc-c----ceEE------EEE-EEecCCceEEEeeeC-Cc-eEEEE-eCCeEEEEeeCCCCccceeeeeeecc---ce
Q 014962 170 EETE-T----WQLR------LAY-STTWPGMVLAICPYL-DR-YFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRT---RF 231 (415)
Q Consensus 170 ~~~~-~----~~L~------l~~-~~~~~g~V~al~~~~-g~-yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~---~~ 231 (415)
-... . -.+. .+. -....+.|.+++-.. |. .|+.+ ..+.|.+|++.. .+.+.....+.. ..
T Consensus 132 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~--~~~~~~~~~~~~~~~~v 209 (615)
T 1pgu_A 132 CVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP--FKFSASDRTHHKQGSFV 209 (615)
T ss_dssp EEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT--BEEEEEECSSSCTTCCE
T ss_pred EEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC--cceeeeecccCCCCceE
Confidence 0000 0 0000 000 011245677766333 32 24433 345688888765 233333222332 33
Q ss_pred EEEEEEEe-CCEEEEeecCCcEEEEEEEccCCeEEEEecC---CCcceeEEEEeeeCCeEEEeCCCCcEEEEecC
Q 014962 232 MIMLLTAH-FTRIAVGDCRDGILFYSYHEDARKLEQIYCD---PSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 232 ~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD---~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~ 302 (415)
........ ++++++|..-..+.++ +...++....-.. .....+.++.+.+...++.+..+|.|.+++..
T Consensus 210 ~~~~~~~~~~~~l~~~~~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSDRKISCF--DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp EEEEECSTTCCEEEEEETTCCEEEE--ETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEE--ECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECC
Confidence 33444445 7799999988888665 4444444444322 56667888888745578888999999999864
No 11
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.82 E-value=0.0075 Score=59.73 Aligned_cols=111 Identities=7% Similarity=0.109 Sum_probs=75.0
Q ss_pred cCCceEEEeeeCCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCe
Q 014962 185 WPGMVLAICPYLDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK 263 (415)
Q Consensus 185 ~~g~V~al~~~~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~ 263 (415)
..++|++++. .|.+|+++. .+.|.+|++... +.+.... .....+..+...++++++|..-..+.++.. ..++
T Consensus 278 ~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~--~~~~ 350 (445)
T 2ovr_B 278 HTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETG--NCIHTLT--GHQSLTSGMELKDNILVSGNADSTVKIWDI--KTGQ 350 (445)
T ss_dssp CSSCEEEEEE-CSSEEEEEETTSCEEEEETTTC--CEEEEEC--CCCSCEEEEEEETTEEEEEETTSCEEEEET--TTCC
T ss_pred CCCceEEEEE-CCCEEEEEeCCCeEEEEECCCC--CEEEEEc--CCcccEEEEEEeCCEEEEEeCCCeEEEEEC--CCCc
Confidence 4678888876 776566554 566999999762 3333322 223356677778999999998888877654 3333
Q ss_pred -EEEEec-CCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 264 -LEQIYC-DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 264 -L~~var-D~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
+..+.. ......++++.+ +.+.++++..+|.|.+++...
T Consensus 351 ~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 351 CLQTLQGPNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp EEEEECSTTSCSSCEEEEEE-CSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEccCCCCCCCEEEEEE-CCCEEEEEeCCCeEEEEECCC
Confidence 333322 235567777777 677899999999999998653
No 12
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.82 E-value=0.0011 Score=64.57 Aligned_cols=192 Identities=9% Similarity=0.064 Sum_probs=114.0
Q ss_pred cCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCCC
Q 014962 18 PKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPS 97 (415)
Q Consensus 18 p~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~ 97 (415)
...++|+|+.+.++.+..+ ..|++.|..+.+.... +... .+.++..+. .+..+|++|..
T Consensus 59 ~~~~~~s~~g~~l~~~~~d-------~~v~i~d~~~~~~~~~--~~~~-~~~~~~~~~-~~~~~l~~~~~---------- 117 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLD-------GHDFLFNTIIRDGSKM--LKRA-DYTAVDTAK-LQMRRFILGTT---------- 117 (420)
T ss_dssp CTTCEEEEEETTEEEEEET-------TEEEEEECCSEETTTT--SCSC-CEEEEEEEC-SSSCEEEEEET----------
T ss_pred ccceeeeecCCeEEEEEcC-------CcEEEEEecccceeeE--EecC-CceEEEEEe-cCCCEEEEEEC----------
Confidence 4578899998888777653 3589999877654322 2222 344433322 34578888854
Q ss_pred CCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceE
Q 014962 98 GEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177 (415)
Q Consensus 98 ~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L 177 (415)
.|.|.+|++.. .++
T Consensus 118 ------dg~i~iwd~~~------------------------------------------------------------~~~ 131 (420)
T 3vl1_A 118 ------EGDIKVLDSNF------------------------------------------------------------NLQ 131 (420)
T ss_dssp ------TSCEEEECTTS------------------------------------------------------------CEE
T ss_pred ------CCCEEEEeCCC------------------------------------------------------------cce
Confidence 46777776551 011
Q ss_pred EEEEE-EecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEE
Q 014962 178 RLAYS-TTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF 254 (415)
Q Consensus 178 ~l~~~-~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~l 254 (415)
+.. ....++|++++-. .|++|+.+. ...|++|++... +.++....+............+++++.|..-..+.+
T Consensus 132 --~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 132 --REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG--SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp --EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred --eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC--cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 111 2456889988854 456455443 356999999762 334443334444444444556788999988888866
Q ss_pred EEEEccCCeEEEEec--CCCcceeEEEEee----------------------eCCeEEEeCCCCcEEEEecC
Q 014962 255 YSYHEDARKLEQIYC--DPSQRLVADCVLM----------------------DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 255 l~y~~~~~~L~~var--D~~~~~vta~~~L----------------------d~d~~l~aD~~gNl~vl~~~ 302 (415)
+. ...++....-+ ......+.++.+. +...++++..+|.|.++...
T Consensus 208 wd--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 208 WE--CGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EE--TTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred eE--CCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence 54 44443333222 2234455555553 22367888999999999864
No 13
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.81 E-value=0.0028 Score=59.75 Aligned_cols=201 Identities=9% Similarity=0.063 Sum_probs=122.5
Q ss_pred CCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCC
Q 014962 15 GGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 15 ~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~ 94 (415)
......++++|+.+.++.+..+ ..|++.|..+.+.+.... ....+.++....-.+..+|+.|..
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~------- 149 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCD-------KTAKMWDLSSNQAIQIAQ--HDAPVKTIHWIKAPNYSCVMTGSW------- 149 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEE--CSSCEEEEEEEECSSCEEEEEEET-------
T ss_pred cCCEEEEEECcCCCEEEEEcCC-------CcEEEEEcCCCCceeecc--ccCceEEEEEEeCCCCCEEEEccC-------
Confidence 3467788888888877766432 369999999888776443 345566665443445677887754
Q ss_pred CCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccccc
Q 014962 95 MPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETET 174 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 174 (415)
.|.|.+|++.. ++
T Consensus 150 ---------dg~i~vwd~~~---------------------------------------------------~~------- 162 (368)
T 3mmy_A 150 ---------DKTLKFWDTRS---------------------------------------------------SN------- 162 (368)
T ss_dssp ---------TSEEEEECSSC---------------------------------------------------SS-------
T ss_pred ---------CCcEEEEECCC---------------------------------------------------Cc-------
Confidence 46788888772 00
Q ss_pred ceEEEEEEEecCCceEEEeeeCCceEEEEeCCeEEEEeeCCCCccceeee-eeeccceEEEEEEEeCCE----EEEeecC
Q 014962 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRF-AVGRTRFMIMLLTAHFTR----IAVGDCR 249 (415)
Q Consensus 175 ~~L~l~~~~~~~g~V~al~~~~g~yLl~~vg~~l~v~~~~~~~~~~L~~~-a~~~~~~~i~sI~~~~n~----IlVGD~~ 249 (415)
. +........+.++.......++++....+.+|++..... .+... ........+..+...... +++|..-
T Consensus 163 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (368)
T 3mmy_A 163 -P---MMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPS-EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE 237 (368)
T ss_dssp -C---SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCE-EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT
T ss_pred -E---EEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccc-hhhhccccccCCCceEEEcccCCCCCCeEEEecCC
Confidence 0 112334567788887777634556667799999986321 12111 112233345555544433 8888888
Q ss_pred CcEEEEEEEccCC---eEEEEecCCC---------cceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 250 DGILFYSYHEDAR---KLEQIYCDPS---------QRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 250 ~Sv~ll~y~~~~~---~L~~varD~~---------~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
..+.++.++.... ....-+.+.. ...++++.+-. ...++.+..+|.|.+++...
T Consensus 238 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 238 GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 8887777654421 1122111111 01577887753 34888999999999998653
No 14
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.012 Score=57.72 Aligned_cols=204 Identities=12% Similarity=0.104 Sum_probs=122.1
Q ss_pred eCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCC---CC--------cEEEEEeCC---CCCeEEEEEEEEECC
Q 014962 13 HLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPL---SG--------SVLSSFKLE---LGETGKSMELVRVGH 78 (415)
Q Consensus 13 ~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~---t~--------~~i~s~~l~---~~E~~~si~~~~l~~ 78 (415)
.-......++++|+.+.++.+..+. .|++.|.. ++ ..+..+.+. ..+.+.++....-.+
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg-------~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDG-------QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTS-------EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCC-------EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC
Confidence 4455778899999888777765332 35665542 22 244566666 456677666554456
Q ss_pred eeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCC
Q 014962 79 EQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSS 158 (415)
Q Consensus 79 ~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 158 (415)
..+++.|+. .|.|.+|++..
T Consensus 182 ~~~l~~~~~----------------d~~i~iwd~~~-------------------------------------------- 201 (437)
T 3gre_A 182 KSLLVALTN----------------LSRVIIFDIRT-------------------------------------------- 201 (437)
T ss_dssp CEEEEEEET----------------TSEEEEEETTT--------------------------------------------
T ss_pred CCEEEEEeC----------------CCeEEEEeCCC--------------------------------------------
Confidence 688888865 47888888772
Q ss_pred CCCCCCCCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEE
Q 014962 159 PDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236 (415)
Q Consensus 159 ~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI 236 (415)
+..+..+......++|++++-- .|++|+++. ...|.+|++.. .+.+..... .....|.++
T Consensus 202 ---------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~-~~~~~v~~~ 263 (437)
T 3gre_A 202 ---------------LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF--NVLIRSWSF-GDHAPITHV 263 (437)
T ss_dssp ---------------CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT--TEEEEEEBC-TTCEEEEEE
T ss_pred ---------------CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC--ccEEEEEec-CCCCceEEE
Confidence 0122222111246789998843 456455544 44599999986 233333221 223456666
Q ss_pred EEe------CCEEEEeecCCcEEEEEEEccCCeEEEEec-------------------------CCCcceeEEEEeeeCC
Q 014962 237 TAH------FTRIAVGDCRDGILFYSYHEDARKLEQIYC-------------------------DPSQRLVADCVLMDVD 285 (415)
Q Consensus 237 ~~~------~n~IlVGD~~~Sv~ll~y~~~~~~L~~var-------------------------D~~~~~vta~~~Ld~d 285 (415)
... +.+++.|..-..+.++ +...++....-. +....+++++.+-+..
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~ 341 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIW--NFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDK 341 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEE--ETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTE
T ss_pred EeccccCCCccEEEEEcCCCcEEEE--EcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCce
Confidence 432 2367777666666555 444333322222 1245568888887555
Q ss_pred eEEEeCCCCcEEEEecCC
Q 014962 286 TAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 286 ~~l~aD~~gNl~vl~~~~ 303 (415)
.++.+..+|.|.++....
T Consensus 342 ~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp EEEEEGGGTEEEEEETTC
T ss_pred EEEecCCCCeEEEEECCC
Confidence 788899999999999654
No 15
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.80 E-value=0.0013 Score=62.14 Aligned_cols=190 Identities=12% Similarity=0.136 Sum_probs=113.2
Q ss_pred ecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc-EEEEEeCCCCC---eEEEEEEEE-E-CCeeEEEEeeecCCCCCCCCC
Q 014962 24 HSESRLLIVMRTELNNDTCSSDICCVDPLSGS-VLSSFKLELGE---TGKSMELVR-V-GHEQVLVVGTSLSSGPAIMPS 97 (415)
Q Consensus 24 ~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~-~i~s~~l~~~E---~~~si~~~~-l-~~~~~lvVGT~~~~~~~~~~~ 97 (415)
+|+.+.++.+..+ ..|++.|..+.+ .+..+....++ .+.++.... + .+..++++|+.
T Consensus 126 s~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~---------- 188 (357)
T 3i2n_A 126 GEGAPEIVTGSRD-------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD---------- 188 (357)
T ss_dssp C-CCCEEEEEETT-------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET----------
T ss_pred CCCccEEEEEeCC-------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc----------
Confidence 4455555544322 359999998876 66766665554 444443211 2 24578888754
Q ss_pred CCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceE
Q 014962 98 GEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177 (415)
Q Consensus 98 ~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L 177 (415)
.|.|.+|++.. .++
T Consensus 189 ------d~~i~i~d~~~------------------------------------------------------------~~~ 202 (357)
T 3i2n_A 189 ------NGDIKLFDLRN------------------------------------------------------------MAL 202 (357)
T ss_dssp ------TSEEEEEETTT------------------------------------------------------------TEE
T ss_pred ------CCeEEEEECcc------------------------------------------------------------Cce
Confidence 47888888772 122
Q ss_pred EEEEEEecCCceEEEeee----CCceEEEEe-CCeEEEEeeCCCCccceeeee---eeccceEEEEEEEe--CC-EEEEe
Q 014962 178 RLAYSTTWPGMVLAICPY----LDRYFLASA-GNAFYVCGFPNDNPQRVRRFA---VGRTRFMIMLLTAH--FT-RIAVG 246 (415)
Q Consensus 178 ~l~~~~~~~g~V~al~~~----~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a---~~~~~~~i~sI~~~--~n-~IlVG 246 (415)
+.....+++|.+++-- .+.+|+++. .+.|.+|++... +.+.... .......+.++... +. +++.|
T Consensus 203 --~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 203 --RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ--HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp --EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE--ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred --eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC--CcccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 2335567889988854 466465553 567999999752 2222211 11122245555543 44 78888
Q ss_pred ecCCcEEEEEEEccCC------------------eEEEEecCCCcceeEEEEeeeCC-eEE-EeCCCCcEEEEecC
Q 014962 247 DCRDGILFYSYHEDAR------------------KLEQIYCDPSQRLVADCVLMDVD-TAV-VSDRKGSIAVLSCS 302 (415)
Q Consensus 247 D~~~Sv~ll~y~~~~~------------------~L~~varD~~~~~vta~~~Ld~d-~~l-~aD~~gNl~vl~~~ 302 (415)
..-..+.++.++.... .+..+. .....++++.+-.++ .++ .+..+|.|.++...
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT--LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE--CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccc--cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 8888898888774322 122222 235578888886444 565 68889999999864
No 16
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.79 E-value=0.026 Score=53.35 Aligned_cols=199 Identities=9% Similarity=0.058 Sum_probs=122.0
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc--EEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS--VLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~--~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~ 94 (415)
....++++|+.+.++++..+ ..|++.|..+.+ .+..+.- ....+.++... .+..+|+.|..
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~--~~~~~l~~~~~------- 72 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNN-------HEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWA--PDSNRIVTCGT------- 72 (372)
T ss_dssp CCCEEEECTTSSEEEEECSS-------SEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEE--TTTTEEEEEET-------
T ss_pred CeEEEEECCCCCEEEEEeCC-------CEEEEEeCCCCcEEeeeeecC-CCCcccEEEEe--CCCCEEEEEcC-------
Confidence 67889999999888776432 469999988876 5555542 23445555432 35578887753
Q ss_pred CCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccccc
Q 014962 95 MPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETET 174 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 174 (415)
.|.|.+|++..
T Consensus 73 ---------dg~i~vwd~~~------------------------------------------------------------ 83 (372)
T 1k8k_C 73 ---------DRNAYVWTLKG------------------------------------------------------------ 83 (372)
T ss_dssp ---------TSCEEEEEEET------------------------------------------------------------
T ss_pred ---------CCeEEEEECCC------------------------------------------------------------
Confidence 47899999872
Q ss_pred ceEEE-EEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--eCCEEEEeecC
Q 014962 175 WQLRL-AYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--HFTRIAVGDCR 249 (415)
Q Consensus 175 ~~L~l-~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~~n~IlVGD~~ 249 (415)
.++.. .......++|.+++-. .|++|+++. ...|.+|++.......+...-.......+.++.. .++++++|..-
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 01111 1123456788888744 456465554 4569999998632111111111111224555554 56799999988
Q ss_pred CcEEEEEEE----------------ccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecC
Q 014962 250 DGILFYSYH----------------EDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 250 ~Sv~ll~y~----------------~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~ 302 (415)
..+.++..+ ...++....-. .....++++.+-.+ ..++.+..+|.|.++...
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 888777643 11223322222 34557888888644 478888999999999864
No 17
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.75 E-value=0.013 Score=62.22 Aligned_cols=195 Identities=12% Similarity=0.133 Sum_probs=122.3
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~ 95 (415)
...+.+++||+.+.++++.. .+.|++.|..+++.+..+.... ..+.++.. ..+..+|++|+.
T Consensus 14 ~~v~~i~~sp~~~~la~~~~-------~g~v~iwd~~~~~~~~~~~~~~-~~v~~~~~--s~~~~~l~~~~~-------- 75 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLY-------SGRVEIWNYETQVEVRSIQVTE-TPVRAGKF--IARKNWIIVGSD-------- 75 (814)
T ss_dssp SCEEEEEECSSSSEEEEEET-------TSEEEEEETTTTEEEEEEECCS-SCEEEEEE--EGGGTEEEEEET--------
T ss_pred CceEEEEECCCCCEEEEEeC-------CCEEEEEECCCCceEEEEecCC-CcEEEEEE--eCCCCEEEEEeC--------
Confidence 36788999999998887752 2469999999999888877432 33444332 135578888854
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.|.+|++.. | .
T Consensus 76 --------dg~i~vw~~~~---------------------------------------------------~--------~ 88 (814)
T 3mkq_A 76 --------DFRIRVFNYNT---------------------------------------------------G--------E 88 (814)
T ss_dssp --------TSEEEEEETTT---------------------------------------------------C--------C
T ss_pred --------CCeEEEEECCC---------------------------------------------------C--------c
Confidence 47888988762 0 1
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE---eCCEEEEeecCC
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA---HFTRIAVGDCRD 250 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~---~~n~IlVGD~~~ 250 (415)
.+..+ ....++|++++-- .|.+|+.+. ...|.+|++.... ........+.. .+.++.. .++++++|..-.
T Consensus 89 ~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 89 KVVDF--EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEH--FVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp EEEEE--ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS-EEEEEEECCSS--CEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEE--ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc-eEEEEEcCCCC--cEEEEEEEcCCCCEEEEEeCCC
Confidence 22222 3356888888844 455455544 3579999997521 22222222233 3445543 566888898888
Q ss_pred cEEEEEEEccCCeEEEEecCCCcceeEEEEee---eCCeEEEeCCCCcEEEEecC
Q 014962 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLM---DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 251 Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L---d~d~~l~aD~~gNl~vl~~~ 302 (415)
.+.++............ ......+.++.+- +...++.+..+|.|.+++..
T Consensus 164 ~v~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp EEEEEETTCSSCSEEEE--CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred eEEEEECCCCcceeEEe--cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 88776543333333332 2333556666665 44578889999999999854
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.75 E-value=0.041 Score=54.34 Aligned_cols=217 Identities=13% Similarity=0.121 Sum_probs=125.3
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMP 96 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~ 96 (415)
....++++|+. .++.+.. -..|++.|..+++.+..+.- ....+.++......+..+++.|+.
T Consensus 164 ~V~~l~~~~~~-~l~s~s~-------dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s~--------- 225 (464)
T 3v7d_B 164 GVWALKYAHGG-ILVSGST-------DRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIVTGSR--------- 225 (464)
T ss_dssp CEEEEEECSTT-EEEEEET-------TSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCEEEEEEET---------
T ss_pred CEEEEEEcCCC-EEEEEeC-------CCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCCEEEEEcC---------
Confidence 55667777665 3333322 24699999999988776652 356677776665566688888865
Q ss_pred CCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccce
Q 014962 97 SGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQ 176 (415)
Q Consensus 97 ~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 176 (415)
.|.|.+|++...... .. ..+..........|+ ....-
T Consensus 226 -------d~~i~vwd~~~~~~~----------------~~---------~~~~~~~~~~~~~~~-----------~~~~~ 262 (464)
T 3v7d_B 226 -------DNTLHVWKLPKESSV----------------PD---------HGEEHDYPLVFHTPE-----------ENPYF 262 (464)
T ss_dssp -------TSCEEEEECCCCCCC-------------------------------CCSSEEESCGG-----------GCTTE
T ss_pred -------CCcEEEeeCCCCccc----------------cc---------ccccCCcceEeeccC-----------CCeEE
Confidence 467888888731000 00 000000000000010 00011
Q ss_pred EEEEEEEecCCceEEEeeeCCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEE
Q 014962 177 LRLAYSTTWPGMVLAICPYLDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFY 255 (415)
Q Consensus 177 L~l~~~~~~~g~V~al~~~~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll 255 (415)
+.. .....++|.++..- +.+|+++. .+.|++|++.. .+.+.....+............++++++|..-..+.++
T Consensus 263 ~~~--~~~~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 263 VGV--LRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQ--MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp EEE--ECCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred EEE--ccCccceEEEEcCC-CCEEEEEeCCCeEEEEECCC--CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 211 23456788888655 54366554 56699999975 23344333333344444555567899999988888665
Q ss_pred EEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 256 SYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 256 ~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
+...++....-+ .....++++.+ +++.++.+..+|.|.++....
T Consensus 338 --d~~~~~~~~~~~-~h~~~v~~~~~-~~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 338 --DLENGELMYTLQ-GHTALVGLLRL-SDKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp --ETTTTEEEEEEC-CCSSCEEEEEE-CSSEEEEEETTSEEEEEETTT
T ss_pred --ECCCCcEEEEEe-CCCCcEEEEEE-cCCEEEEEeCCCcEEEEECCC
Confidence 444454443333 24556766666 567889999999999998643
No 19
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.74 E-value=0.0098 Score=57.16 Aligned_cols=109 Identities=7% Similarity=0.058 Sum_probs=67.5
Q ss_pred eEEEeeeCCceEEE-EeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEE
Q 014962 189 VLAICPYLDRYFLA-SAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267 (415)
Q Consensus 189 V~al~~~~g~yLl~-~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~v 267 (415)
+.+++-..+..+++ +..+.|++|++... +.+.....+..+.....+...++++++|..-..+.++..+.... +..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~ 285 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEK--TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS-QNCF 285 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCS--SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC-SEEE
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCC--ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc-ceEe
Confidence 55555444432444 35556999999863 33333333344444445555678999999888887665443221 2222
Q ss_pred ecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecC
Q 014962 268 YCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 268 arD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~ 302 (415)
......++++.+..++.++.+..+|.|.++...
T Consensus 286 --~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 286 --YGHSQSIVSASWVGDDKVISCSMDGSVRLWSLK 318 (425)
T ss_dssp --CCCSSCEEEEEEETTTEEEEEETTSEEEEEETT
T ss_pred --cCCCccEEEEEECCCCEEEEEeCCCcEEEEECC
Confidence 224557888888765588888999999999864
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.73 E-value=0.03 Score=52.26 Aligned_cols=195 Identities=7% Similarity=0.015 Sum_probs=117.3
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
..+.++++|+.+.++.+..+ ..|++.|..+++.+..+.-. ...+. .+.+. +..+|+.|..
T Consensus 25 ~v~~~~~s~~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~h-~~~v~---~~~~~~~~~~l~s~~~-------- 85 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSAD-------KLIKIWGAYDGKFEKTISGH-KLGIS---DVAWSSDSNLLVSASD-------- 85 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEEECCC-SSCEE---EEEECTTSSEEEEEET--------
T ss_pred cEEEEEECCCCCEEEEeeCC-------CeEEEEeCCCcccchhhccC-CCceE---EEEEcCCCCEEEEECC--------
Confidence 56788999998877766533 35899998888876655422 22333 33443 4578887744
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.|.+|++.. +.
T Consensus 86 --------d~~i~vwd~~~-----------------------------------------------------------~~ 98 (312)
T 4ery_A 86 --------DKTLKIWDVSS-----------------------------------------------------------GK 98 (312)
T ss_dssp --------TSEEEEEETTT-----------------------------------------------------------CC
T ss_pred --------CCEEEEEECCC-----------------------------------------------------------Cc
Confidence 46788888762 01
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEE
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGIL 253 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ 253 (415)
.+..+ ....+.|.+++-. .+.+|+.+ ....|.+|++... +.+.....+..+.........++++++|..-..+.
T Consensus 99 ~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 99 CLKTL--KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp EEEEE--ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEE--cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 12222 2345677777633 35535444 3466999999752 33443333333434444445678999998888886
Q ss_pred EEEEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 254 FYSYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 254 ll~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
++ +...++....-.......+.++.+-. ...++++..+|.|.++.+..
T Consensus 175 ~w--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 175 IW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp EE--ETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EE--ECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 65 44444333322233344566666643 34788889999999998643
No 21
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.69 E-value=0.0072 Score=58.94 Aligned_cols=201 Identities=10% Similarity=0.052 Sum_probs=118.4
Q ss_pred cCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCCC
Q 014962 18 PKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIMP 96 (415)
Q Consensus 18 p~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~~ 96 (415)
+|-++++|+.+.+++++... -..|++.|..+++.+..++.. ..+.+ +.|. +..+++.|+.
T Consensus 136 ~~~v~fSpDg~~la~as~~~-----d~~i~iwd~~~~~~~~~~~~~--~~V~~---v~fspdg~~l~s~s~--------- 196 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKV-----PAIMRIIDPSDLTEKFEIETR--GEVKD---LHFSTDGKVVAYITG--------- 196 (365)
T ss_dssp EEEEEECTTSSCEEEEESCS-----SCEEEEEETTTTEEEEEEECS--SCCCE---EEECTTSSEEEEECS---------
T ss_pred EEEEEEcCCCCEEEEEECCC-----CCEEEEeECCCCcEEEEeCCC--CceEE---EEEccCCceEEeccc---------
Confidence 56789999999998887432 257999999999988777632 33444 4454 5578877743
Q ss_pred CCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccce
Q 014962 97 SGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQ 176 (415)
Q Consensus 97 ~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 176 (415)
+.+.++.... | ..
T Consensus 197 --------~~~~~~~~~~---------------------------------------------------~--------~~ 209 (365)
T 4h5i_A 197 --------SSLEVISTVT---------------------------------------------------G--------SC 209 (365)
T ss_dssp --------SCEEEEETTT---------------------------------------------------C--------CE
T ss_pred --------eeEEEEEecc---------------------------------------------------C--------cc
Confidence 1233333220 0 01
Q ss_pred EEEEEEEecCCceEEEeee-CCceEEEEe-CC----eEEEEeeCCCCccceee--eeeeccceEEEEEEEeCCEEEEeec
Q 014962 177 LRLAYSTTWPGMVLAICPY-LDRYFLASA-GN----AFYVCGFPNDNPQRVRR--FAVGRTRFMIMLLTAHFTRIAVGDC 248 (415)
Q Consensus 177 L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~----~l~v~~~~~~~~~~L~~--~a~~~~~~~i~sI~~~~n~IlVGD~ 248 (415)
+.......-.+.|.+++-. .|++|+++. .+ .+..|+........++. ......+...+.+...+.+|++|..
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 1111111223456666533 456454443 22 24455554321111111 1112223333444457889999999
Q ss_pred CCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecCCCcC
Q 014962 249 RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCSDRLE 306 (415)
Q Consensus 249 ~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~~~~~ 306 (415)
-.+|.++ +....++...-...+..+|+++.|-.+ ..++.+-.++.|.++++|++..
T Consensus 290 D~~V~iw--d~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 290 DNSIALV--KLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp TSCEEEE--ETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred CCEEEEE--ECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 8888665 566666655445667788999999744 4777888999999999987543
No 22
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.0014 Score=62.89 Aligned_cols=171 Identities=8% Similarity=0.041 Sum_probs=103.6
Q ss_pred EEEEeCCC--ccCEEEEec--CCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEE
Q 014962 9 VRKFHLGG--TPKKVLYHS--ESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLV 83 (415)
Q Consensus 9 i~~i~L~~--tp~~I~y~~--~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lv 83 (415)
++.+.++. ....++++| ..+.++.+..+ ..|++.|..+++.+..+.......+.|+ .+. +..+++
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~~~~i~~~---~~~pdg~~la 186 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAKSDVEYSSG---VLHKDSLLLA 186 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETT-------CCEEEEESSSSCEEEEECCCSSCCCCEE---EECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-------CcEEEEECCCCcEEEEEecCCCCceEEE---EECCCCCEEE
Confidence 44455453 467788888 77776655533 3599999998888665544444455444 343 557888
Q ss_pred EeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCC
Q 014962 84 VGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDAS 163 (415)
Q Consensus 84 VGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 163 (415)
+|+. .|.|.+|++...
T Consensus 187 sg~~----------------dg~i~iwd~~~~------------------------------------------------ 202 (343)
T 3lrv_A 187 LYSP----------------DGILDVYNLSSP------------------------------------------------ 202 (343)
T ss_dssp EECT----------------TSCEEEEESSCT------------------------------------------------
T ss_pred EEcC----------------CCEEEEEECCCC------------------------------------------------
Confidence 8854 578999988830
Q ss_pred CCCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeee---eccce--EEEEEE
Q 014962 164 CDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAV---GRTRF--MIMLLT 237 (415)
Q Consensus 164 ~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~---~~~~~--~i~sI~ 237 (415)
.. ...++ +..-.++|++|+-- +|++|+++....|.+|++.... .+..... ...+. ......
T Consensus 203 ---~~------~~~~~--~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 203 ---DQ------ASSRF--PVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV--GTLAYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp ---TS------CCEEC--CCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSST--TCBSSCCCBC-----CCEEEEEC
T ss_pred ---CC------CccEE--eccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC--cceeecccccccccccceEEEEC
Confidence 00 00011 01235788888733 4665777777789999998632 2221111 11111 235555
Q ss_pred EeCCEEEEeec-CCcEEEEEEEccCCeEEE
Q 014962 238 AHFTRIAVGDC-RDGILFYSYHEDARKLEQ 266 (415)
Q Consensus 238 ~~~n~IlVGD~-~~Sv~ll~y~~~~~~L~~ 266 (415)
..+.++++|.. -..+.++.|+........
T Consensus 270 ~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 270 DSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred CCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 67889999777 778999998766655544
No 23
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.66 E-value=0.017 Score=55.06 Aligned_cols=201 Identities=10% Similarity=0.107 Sum_probs=121.9
Q ss_pred EEEEeCCC-ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEee
Q 014962 9 VRKFHLGG-TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGT 86 (415)
Q Consensus 9 i~~i~L~~-tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT 86 (415)
++.+..+. ....++++|+.+.++.+.. ...|++.|..+.+....+... ...+.+ +.+. +..+|+.|.
T Consensus 115 ~~~~~~~~~~~~~~~~spdg~~l~~g~~-------dg~v~i~~~~~~~~~~~~~~~-~~~v~~---~~~spdg~~lasg~ 183 (321)
T 3ow8_A 115 IKSIDAGPVDAWTLAFSPDSQYLATGTH-------VGKVNIFGVESGKKEYSLDTR-GKFILS---IAYSPDGKYLASGA 183 (321)
T ss_dssp EEEEECCTTCCCCEEECTTSSEEEEECT-------TSEEEEEETTTCSEEEEEECS-SSCEEE---EEECTTSSEEEEEE
T ss_pred EEEEeCCCccEEEEEECCCCCEEEEEcC-------CCcEEEEEcCCCceeEEecCC-CceEEE---EEECCCCCEEEEEc
Confidence 34444443 5667889998887776532 246999999888876665543 334444 3343 557888885
Q ss_pred ecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCC
Q 014962 87 SLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG 166 (415)
Q Consensus 87 ~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g 166 (415)
. .|.|.+|++..
T Consensus 184 ~----------------dg~i~iwd~~~---------------------------------------------------- 195 (321)
T 3ow8_A 184 I----------------DGIINIFDIAT---------------------------------------------------- 195 (321)
T ss_dssp T----------------TSCEEEEETTT----------------------------------------------------
T ss_pred C----------------CCeEEEEECCC----------------------------------------------------
Confidence 4 46788887761
Q ss_pred ccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEE
Q 014962 167 IKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIA 244 (415)
Q Consensus 167 ~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~Il 244 (415)
+..+..+ ....++|++++-- +|++|+.+. ...|.+|++... +.+.....+......+.....+.+++
T Consensus 196 -------~~~~~~~--~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l~ 264 (321)
T 3ow8_A 196 -------GKLLHTL--EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--NLAGTLSGHASWVLNVAFCPDDTHFV 264 (321)
T ss_dssp -------TEEEEEE--CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred -------CcEEEEE--cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--ceeEEEcCCCCceEEEEECCCCCEEE
Confidence 0011111 2345778888743 456344433 345999999752 33333222332333333344677899
Q ss_pred EeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecC
Q 014962 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 245 VGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~ 302 (415)
.|..-..+.++. ...++....-.. ....|.++.|-.+ ..++.+..+|.|.++++|
T Consensus 265 s~s~D~~v~iwd--~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 265 SSSSDKSVKVWD--VGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTSCEEEEE--TTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEeCCCcEEEEe--CCCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 998888886654 444444433332 4457888888644 478888999999998865
No 24
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.64 E-value=0.059 Score=53.14 Aligned_cols=186 Identities=11% Similarity=0.081 Sum_probs=115.9
Q ss_pred EEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCCCCCcc
Q 014962 22 LYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAE 101 (415)
Q Consensus 22 ~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~e~~ 101 (415)
+.+++.+.++.+..+ ..|++.|..+++.+..+.-. ...+.|+.. +..++++|+.
T Consensus 138 ~~~~d~~~l~~g~~d-------g~i~iwd~~~~~~~~~~~~h-~~~v~~l~~----~~~~l~sg~~-------------- 191 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD-------NTIKIWDKNTLECKRILTGH-TGSVLCLQY----DERVIITGSS-------------- 191 (435)
T ss_dssp EEECCSSEEEEEESS-------SCEEEEESSSCCEEEEECCC-SSCEEEEEC----CSSEEEEEET--------------
T ss_pred EEEECCCEEEEEeCC-------CeEEEEeCCCCeEEEEEcCC-CCcEEEEEE----CCCEEEEEcC--------------
Confidence 344455555554422 46999999999887765532 345555543 5678888855
Q ss_pred ccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEE
Q 014962 102 STKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAY 181 (415)
Q Consensus 102 ~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~ 181 (415)
.|.|.+|++.. | ..+..+
T Consensus 192 --dg~i~vwd~~~---------------------------------------------------~--------~~~~~~- 209 (435)
T 1p22_A 192 --DSTVRVWDVNT---------------------------------------------------G--------EMLNTL- 209 (435)
T ss_dssp --TSCEEEEESSS---------------------------------------------------C--------CEEEEE-
T ss_pred --CCeEEEEECCC---------------------------------------------------C--------cEEEEE-
Confidence 47888988872 0 011111
Q ss_pred EEecCCceEEEeeeCCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEcc
Q 014962 182 STTWPGMVLAICPYLDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 182 ~~~~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
..-.++|.+++-- +.+|+++ ..+.|.+|++.......+.. ........+.++...++++++|..-..+.++ +..
T Consensus 210 -~~h~~~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vw--d~~ 284 (435)
T 1p22_A 210 -IHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRR-VLVGHRAAVNVVDFDDKYIVSASGDRTIKVW--NTS 284 (435)
T ss_dssp -CCCCSCEEEEECC-TTEEEEEETTSCEEEEECSSSSCCEEEE-EECCCSSCEEEEEEETTEEEEEETTSEEEEE--ETT
T ss_pred -cCCCCcEEEEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeee-EecCCCCcEEEEEeCCCEEEEEeCCCeEEEE--ECC
Confidence 2346778888754 4435554 44669999998632111111 2222233567777789999999988887665 444
Q ss_pred CCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecC
Q 014962 261 ARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 261 ~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~ 302 (415)
.++....-. .....++++.+ +++.++++..+|.|.++...
T Consensus 285 ~~~~~~~~~-~~~~~v~~~~~-~~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 285 TCEFVRTLN-GHKRGIACLQY-RDRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp TCCEEEEEE-CCSSCEEEEEE-ETTEEEEEETTSCEEEEETT
T ss_pred cCcEEEEEc-CCCCcEEEEEe-CCCEEEEEeCCCeEEEEECC
Confidence 444433322 24456777766 77889999999999999864
No 25
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.63 E-value=0.024 Score=55.33 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=121.5
Q ss_pred EEEeC-CCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeee
Q 014962 10 RKFHL-GGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTS 87 (415)
Q Consensus 10 ~~i~L-~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~ 87 (415)
++++. +..|..++++|+.+.++++... ...|+++|..+++.+..+.. ...+. .+.+. +..+++++..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~--~~~~~---~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 205 ATVDLTGKWSKILLYDPIRDLVYCSNWI------SEDISVIDRKTKLEIRKTDK--IGLPR---GLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEEECSSSSEEEEEEETTTTEEEEEETT------TTEEEEEETTTTEEEEECCC--CSEEE---EEEECTTSSEEEEEEE
T ss_pred EEEcCCCCCeeEEEEcCCCCEEEEEecC------CCcEEEEECCCCcEEEEecC--CCCce---EEEEcCCCCEEEEEEC
Confidence 44543 3478899999998877666522 23699999999988776554 33333 34443 4567777765
Q ss_pred cCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCc
Q 014962 88 LSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGI 167 (415)
Q Consensus 88 ~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 167 (415)
... .-....|.|++|++.. |
T Consensus 274 ~~~--------~~~~~dg~i~~~d~~~---------------------------------------------------~- 293 (433)
T 3bws_A 274 SAS--------NQESGGGRLGIYSMDK---------------------------------------------------E- 293 (433)
T ss_dssp ESC--------TTCSCCEEEEEEETTT---------------------------------------------------T-
T ss_pred CCC--------ccccCCCeEEEEECCC---------------------------------------------------C-
Confidence 321 1112578899988762 0
Q ss_pred cccccccceEEEEEEEecCCceEEEeee-CCceEEEE--eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEE
Q 014962 168 KLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLAS--AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIA 244 (415)
Q Consensus 168 ~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~--vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~Il 244 (415)
..+..+ ...+.+.+++-- .|++|+++ -.+.|.+|++.. .+.+.... .........+...+.+++
T Consensus 294 -------~~~~~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~--~~~~~~~~-~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 294 -------KLIDTI---GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE--KKVQKSIP-VFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp -------EEEEEE---EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT--TEEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred -------cEEeec---cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC--CcEEEEec-CCCCCCeEEEcCCCCEEE
Confidence 011211 223456666532 35446554 456799999975 23333322 222333334444577899
Q ss_pred EeecCCc-E------------EEEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeC-CCCcEEEEecC
Q 014962 245 VGDCRDG-I------------LFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSD-RKGSIAVLSCS 302 (415)
Q Consensus 245 VGD~~~S-v------------~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD-~~gNl~vl~~~ 302 (415)
+++.... + .+..|+...+++...-.. ..++.++.+-.+ ..+++++ .++.|.+++.+
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 9886542 1 467778777665544433 345677777544 3556665 48999998864
No 26
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.016 Score=54.46 Aligned_cols=213 Identities=9% Similarity=0.058 Sum_probs=122.7
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeE---------EEEEEEEEC-C
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETG---------KSMELVRVG-H 78 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~---------~si~~~~l~-~ 78 (415)
++.++....+..++++|+.+.++++..+.. .....|+++|..+......+.....+.+ ..+..+.+. +
T Consensus 109 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 109 VATWKSPVPVKRVEFSPCGNYFLAILDNVM--KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEECCBT--TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred EEEeecCCCeEEEEEccCCCEEEEecCCcc--CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 455666778889999999888877764421 1224577777654432111111111110 023333343 4
Q ss_pred eeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCC
Q 014962 79 EQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSS 158 (415)
Q Consensus 79 ~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 158 (415)
..++++|+. .|.|.+|++..
T Consensus 187 ~~~l~~~~~----------------dg~i~i~d~~~-------------------------------------------- 206 (369)
T 3zwl_B 187 GKYIIAGHK----------------DGKISKYDVSN-------------------------------------------- 206 (369)
T ss_dssp GCEEEEEET----------------TSEEEEEETTT--------------------------------------------
T ss_pred CCEEEEEcC----------------CCEEEEEECCC--------------------------------------------
Confidence 467887754 47888888762
Q ss_pred CCCCCCCCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEE
Q 014962 159 PDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236 (415)
Q Consensus 159 ~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI 236 (415)
. ...+..+ ....++|.+++-- .|.+|+++. .+.|.+|++.. .+.+.... ...+.....+
T Consensus 207 -~-------------~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~--~~~~~~~~-~~~~~~~~~~ 267 (369)
T 3zwl_B 207 -N-------------YEYVDSI--DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST--LQVLKKYE-TDCPLNTAVI 267 (369)
T ss_dssp -T-------------TEEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--CCEEEEEE-CSSCEEEEEE
T ss_pred -C-------------cEeEEEE--ecCCCceeEEEECCCCCEEEEecCCceEEEEECCC--Cceeeeec-CCCCceeEEe
Confidence 0 0012212 2346788888744 466455543 46799999976 23343322 3444555556
Q ss_pred EEeCCEEEEeecCCcE------------EEEEEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 237 TAHFTRIAVGDCRDGI------------LFYSYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 237 ~~~~n~IlVGD~~~Sv------------~ll~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
...+.++++|....+. .+..|+....+....-.. ....++++.+-. ...++.++.+|.|.++++..
T Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp CSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 6678899998877643 334455544444333222 345677888764 45788889999999998754
No 27
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.63 E-value=0.049 Score=51.98 Aligned_cols=197 Identities=9% Similarity=0.113 Sum_probs=121.3
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++.+..+ ..|++.|..+++.+..+..... .+. .+.+. +..+++.|..
T Consensus 57 ~v~~~~~s~d~~~l~s~s~D-------g~v~iWd~~~~~~~~~~~~~~~-~v~---~~~~s~~~~~l~s~~~-------- 117 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQD-------GKLIIWDSYTTNKVHAIPLRSS-WVM---TCAYAPSGNYVACGGL-------- 117 (340)
T ss_dssp CEEEEEECTTSSEEEEEETT-------TEEEEEETTTCCEEEEEECSSS-CEE---EEEECTTSSEEEEEET--------
T ss_pred ceEEEEECCCCCEEEEEeCC-------CcEEEEECCCCCcceEeecCCc-cEE---EEEECCCCCEEEEEeC--------
Confidence 55678888888877666533 3599999999988887776543 333 33443 4578888754
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.+.+|++... . .
T Consensus 118 --------d~~v~iw~~~~~--------------------------------------------~--------------~ 131 (340)
T 1got_B 118 --------DNICSIYNLKTR--------------------------------------------E--------------G 131 (340)
T ss_dssp --------TCEEEEEETTTC--------------------------------------------S--------------B
T ss_pred --------CCeEEEEECccC--------------------------------------------C--------------C
Confidence 367888877620 0 0
Q ss_pred eEEEEEE-EecCCceEEEeeeCCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEE
Q 014962 176 QLRLAYS-TTWPGMVLAICPYLDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGIL 253 (415)
Q Consensus 176 ~L~l~~~-~~~~g~V~al~~~~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ 253 (415)
..++... ..-.+.|.++.-..+..|+.+. ...|.+|++... +.+.....+........+...+++++.|..-..+.
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG--QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCC--cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 1111111 2346778887755544366554 455899999752 33333232333334444445677899999888887
Q ss_pred EEEEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 254 FYSYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 254 ll~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
++. ...+.....-. .....++++.|-. ...++.+..+|.+.++....
T Consensus 210 ~wd--~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 210 LWD--VREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257 (340)
T ss_dssp EEE--TTTCSEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEE--CCCCeeEEEEc-CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 754 43443332222 2445688888764 45788889999999998643
No 28
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.62 E-value=0.019 Score=54.39 Aligned_cols=202 Identities=8% Similarity=0.041 Sum_probs=120.2
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCC-CeEEEEEEEEEC-CeeEEEEeeecCCCCC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELG-ETGKSMELVRVG-HEQVLVVGTSLSSGPA 93 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~-E~~~si~~~~l~-~~~~lvVGT~~~~~~~ 93 (415)
.....++++|+.+.++.+..+ ..|++.|..+.+....+.+... ..+.++ .+. +..+|++|+.
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~l~~~~~------ 116 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTD-------RNAYVWTLKGRTWKPTLVILRINRAARCV---RWAPNEKKFAVGSG------ 116 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETT-------SCEEEEEEETTEEEEEEECCCCSSCEEEE---EECTTSSEEEEEET------
T ss_pred CcccEEEEeCCCCEEEEEcCC-------CeEEEEECCCCeeeeeEEeecCCCceeEE---EECCCCCEEEEEeC------
Confidence 367788999988887766532 3589999888876666665543 344443 343 4578888864
Q ss_pred CCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccc
Q 014962 94 IMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETE 173 (415)
Q Consensus 94 ~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 173 (415)
.|.|.+|++... .
T Consensus 117 ----------d~~v~i~d~~~~--------------------------------------------~------------- 129 (372)
T 1k8k_C 117 ----------SRVISICYFEQE--------------------------------------------N------------- 129 (372)
T ss_dssp ----------TSSEEEEEEETT--------------------------------------------T-------------
T ss_pred ----------CCEEEEEEecCC--------------------------------------------C-------------
Confidence 467899998830 0
Q ss_pred cceEEEEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCC----------------CccceeeeeeeccceEEEE
Q 014962 174 TWQLRLAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPND----------------NPQRVRRFAVGRTRFMIML 235 (415)
Q Consensus 174 ~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~----------------~~~~L~~~a~~~~~~~i~s 235 (415)
.+.+.........+.|.+++-. .|.+|+++ ..+.|++|++... ..+.+.....+........
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (372)
T 1k8k_C 130 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 209 (372)
T ss_dssp TEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred cceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEE
Confidence 0111111122346788888744 45545554 3567999996410 0122322222222333333
Q ss_pred EEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 236 I~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
....+++|++|..-..+.++..+. ...+..+. .....++++.+-.++.++++-.+|.+.++....
T Consensus 210 ~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 210 FSANGSRVAWVSHDSTVCLADADK-KMAVATLA--SETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp ECSSSSEEEEEETTTEEEEEEGGG-TTEEEEEE--CSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC-CceeEEEc--cCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 444677999999877776665432 22333333 234467888887666555555889999988654
No 29
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.62 E-value=0.04 Score=53.76 Aligned_cols=176 Identities=11% Similarity=0.048 Sum_probs=110.6
Q ss_pred eeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCc
Q 014962 44 SDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSM 123 (415)
Q Consensus 44 s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~ 123 (415)
..|++.|..+++....+.......+.+++.- .+..+|++|+. .|.|.+|++..
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s--~~~~~l~~~~~----------------dg~i~iwd~~~--------- 165 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWS--HDGSFLSVGLG----------------NGLVDIYDVES--------- 165 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEEC--TTSSEEEEEET----------------TSCEEEEETTT---------
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEEC--CCCCEEEEECC----------------CCeEEEEECcC---------
Confidence 4699999999999888888767777766432 35578998865 46788887762
Q ss_pred cccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEEEEecCCceEEEeeeCCceEEEE
Q 014962 124 TFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLAS 203 (415)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~~ 203 (415)
+..+..+ ....++|.+++- ++.+|+.+
T Consensus 166 --------------------------------------------------~~~~~~~--~~~~~~v~~~~~-~~~~l~~~ 192 (401)
T 4aez_A 166 --------------------------------------------------QTKLRTM--AGHQARVGCLSW-NRHVLSSG 192 (401)
T ss_dssp --------------------------------------------------CCEEEEE--CCCSSCEEEEEE-ETTEEEEE
T ss_pred --------------------------------------------------CeEEEEe--cCCCCceEEEEE-CCCEEEEE
Confidence 0122222 245678888875 66645544
Q ss_pred -eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEee
Q 014962 204 -AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282 (415)
Q Consensus 204 -vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L 282 (415)
-...|.+|++.... +.+.....+............++++++|..-..+.++.. ...+....-. ....++.++.+-
T Consensus 193 ~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~--~~~~~~~~~~-~~~~~v~~~~~~ 268 (401)
T 4aez_A 193 SRSGAIHHHDVRIAN-HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDA--RSSIPKFTKT-NHNAAVKAVAWC 268 (401)
T ss_dssp ETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET--TCSSEEEEEC-CCSSCCCEEEEC
T ss_pred cCCCCEEEEecccCc-ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccC--CCCCccEEec-CCcceEEEEEEC
Confidence 34568999998432 223332333333333334446779999998888866644 3333332222 345678888886
Q ss_pred e-CCeEEE-eC--CCCcEEEEecCC
Q 014962 283 D-VDTAVV-SD--RKGSIAVLSCSD 303 (415)
Q Consensus 283 d-~d~~l~-aD--~~gNl~vl~~~~ 303 (415)
. .+.+++ +. .+|.|.++....
T Consensus 269 p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 269 PWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp TTSTTEEEEECCTTTCEEEEEETTT
T ss_pred CCCCCEEEEecCCCCCEEEEEECCC
Confidence 4 344444 33 689999998643
No 30
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.61 E-value=0.011 Score=55.16 Aligned_cols=96 Identities=17% Similarity=0.157 Sum_probs=58.3
Q ss_pred eEEEEeCCC---ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCC-eEEEEEEEEEC-CeeEE
Q 014962 8 NVRKFHLGG---TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE-TGKSMELVRVG-HEQVL 82 (415)
Q Consensus 8 ~i~~i~L~~---tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E-~~~si~~~~l~-~~~~l 82 (415)
.+++++++. .|+.++++|+.+.+++.... ...|.++|..+++.+..+.+.... .......+.+. +..++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 96 (337)
T 1pby_B 23 VDKVITIADAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTL 96 (337)
T ss_dssp EEEEEECTTCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEE
T ss_pred EEEEEEcCCCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEE
Confidence 456788888 79999999999877666522 246999999999988888875411 11112233343 44566
Q ss_pred EEeeecCCCCCCCCCCCccccccEEEEEEEE
Q 014962 83 VVGTSLSSGPAIMPSGEAESTKGRLIVLCIE 113 (415)
Q Consensus 83 vVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~ 113 (415)
+++..... .. +++.....|+|.+|++.
T Consensus 97 ~~~~~~~~---~~-~~~~~~~~~~i~v~d~~ 123 (337)
T 1pby_B 97 AIYESPVR---LE-LTHFEVQPTRVALYDAE 123 (337)
T ss_dssp EEEEEEEE---EC-SSCEEECCCEEEEEETT
T ss_pred EEEecccc---cc-cccccccCceEEEEECC
Confidence 66643110 00 11111135788888765
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.59 E-value=0.045 Score=51.38 Aligned_cols=193 Identities=11% Similarity=0.128 Sum_probs=118.0
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEE-CCeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRV-GHEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l-~~~~~lvVGT~~~~~~~~~ 95 (415)
..+.|+++|+.+.++.+..+ ..|++.|..+++.+..+..... .+.+ +.| .+..+|+.|..
T Consensus 15 ~V~~~~fsp~~~~l~s~~~d-------g~v~lWd~~~~~~~~~~~~~~~-~v~~---~~~~~~~~~l~s~s~-------- 75 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYS-------GRVELWNYETQVEVRSIQVTET-PVRA---GKFIARKNWIIVGSD-------- 75 (304)
T ss_dssp CEEEEEECSSSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSS-CEEE---EEEEGGGTEEEEEET--------
T ss_pred ceEEEEECCCCCEEEEEcCC-------CcEEEEECCCCceeEEeeccCC-cEEE---EEEeCCCCEEEEECC--------
Confidence 57889999998887766532 4699999999988877765432 3333 333 35578888754
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
-|.|.+|++.. | .
T Consensus 76 --------d~~i~vwd~~~---------------------------------------------------~--------~ 88 (304)
T 2ynn_A 76 --------DFRIRVFNYNT---------------------------------------------------G--------E 88 (304)
T ss_dssp --------TSEEEEEETTT---------------------------------------------------C--------C
T ss_pred --------CCEEEEEECCC---------------------------------------------------C--------c
Confidence 46788887762 0 1
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE---eCCEEEEeecCC
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA---HFTRIAVGDCRD 250 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~---~~n~IlVGD~~~ 250 (415)
.+..+ ..-.+.|++|+-- .+.+|+.|. ...|.+|++... ..+.. .+....-.|.++.. .+++++.|..-.
T Consensus 89 ~~~~~--~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~--~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 89 KVVDF--EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN--WALEQ-TFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp EEEEE--ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT--TEEEE-EECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred EEEEE--eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC--cchhh-hhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 22222 3356788888844 355354443 356999999752 12222 12122224555554 346888898888
Q ss_pred cEEEEEEEccCCeEEEEecCCCcceeEEEEee---eCCeEEEeCCCCcEEEEecC
Q 014962 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLM---DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 251 Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L---d~d~~l~aD~~gNl~vl~~~ 302 (415)
.+.++........+... ......+..+.+. +...++.+..+|.|.++...
T Consensus 164 ~v~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (304)
T ss_dssp EEEEEETTCSSCSEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCCccceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC
Confidence 88776554333333332 2233455555554 23478888999999999854
No 32
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.57 E-value=0.0091 Score=57.16 Aligned_cols=198 Identities=10% Similarity=0.067 Sum_probs=117.5
Q ss_pred CccCEEEEec-CCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCC------------CCCeEEEEEEEEEC--Cee
Q 014962 16 GTPKKVLYHS-ESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLE------------LGETGKSMELVRVG--HEQ 80 (415)
Q Consensus 16 ~tp~~I~y~~-~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~------------~~E~~~si~~~~l~--~~~ 80 (415)
.....++++| +.+.++.+..+ ..|++.|..+.+....+... ....+.++ .+. +..
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~ 113 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSD-------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETV---QWYPHDTG 113 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETT-------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEE---EECTTCTT
T ss_pred CcEEEEEEecCCCCEEEEEcCC-------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEE---EEccCCCc
Confidence 3667899999 77777766533 35899998877644433321 23344444 333 335
Q ss_pred EEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCC
Q 014962 81 VLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPD 160 (415)
Q Consensus 81 ~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (415)
+++.|+. .|.|.+|++..
T Consensus 114 ~l~s~~~----------------d~~i~iwd~~~---------------------------------------------- 131 (408)
T 4a11_B 114 MFTSSSF----------------DKTLKVWDTNT---------------------------------------------- 131 (408)
T ss_dssp CEEEEET----------------TSEEEEEETTT----------------------------------------------
T ss_pred EEEEEeC----------------CCeEEEeeCCC----------------------------------------------
Confidence 6776643 46888887762
Q ss_pred CCCCCCccccccccceEEEEEEEecCCceEEEeee----CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEE
Q 014962 161 DASCDGIKLEETETWQLRLAYSTTWPGMVLAICPY----LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235 (415)
Q Consensus 161 ~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~----~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~s 235 (415)
.+. +......+++.+++-. ++.+|+++ ..+.|.+|++... +.+.....+..+.....
T Consensus 132 --------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 132 --------------LQT--ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG--SCSHILQGHRQEILAVS 193 (408)
T ss_dssp --------------TEE--EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS--CCCEEECCCCSCEEEEE
T ss_pred --------------Ccc--ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc--ceeeeecCCCCcEEEEE
Confidence 011 2223356777777643 23335544 4456999999763 33433333333333333
Q ss_pred EEEeCC-EEEEeecCCcEEEEEEEccCCeEEEEec-------------CCCcceeEEEEeeeC-CeEEEeCCCCcEEEEe
Q 014962 236 LTAHFT-RIAVGDCRDGILFYSYHEDARKLEQIYC-------------DPSQRLVADCVLMDV-DTAVVSDRKGSIAVLS 300 (415)
Q Consensus 236 I~~~~n-~IlVGD~~~Sv~ll~y~~~~~~L~~var-------------D~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~ 300 (415)
....++ ++++|+.-..+.++..+.....+..+.. ......++++.+-.+ ..++.+..+|.|.+++
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 334455 5778888888877765544333333311 234567888888644 4788889999999999
Q ss_pred cCC
Q 014962 301 CSD 303 (415)
Q Consensus 301 ~~~ 303 (415)
...
T Consensus 274 ~~~ 276 (408)
T 4a11_B 274 SSN 276 (408)
T ss_dssp TTT
T ss_pred CCC
Confidence 654
No 33
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.57 E-value=0.029 Score=52.25 Aligned_cols=233 Identities=12% Similarity=0.099 Sum_probs=129.2
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeC---CCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEE
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDP---LSGSVLSSFKLELGETGKSMELVRVG-HEQVLV 83 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~---~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lv 83 (415)
.+..++....|..++++|+.+.++++... ...|.++|. .+.+.+..+. ....+.++ .+. +..+++
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~---~~s~dg~~l~ 144 (343)
T 1ri6_A 76 FAAESALPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVVE--GLDGCHSA---NISPDNRTLW 144 (343)
T ss_dssp EEEEEECSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEEC--CCTTBCCC---EECTTSSEEE
T ss_pred eccccccCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCcccccccccc--CCCCceEE---EECCCCCEEE
Confidence 45577777799999999999877666521 245777776 3334444433 23333332 233 345666
Q ss_pred EeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCC
Q 014962 84 VGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDAS 163 (415)
Q Consensus 84 VGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 163 (415)
++.. ..|+|.+|++.. +
T Consensus 145 ~~~~---------------~~~~v~~~d~~~---------------------------------------------~--- 161 (343)
T 1ri6_A 145 VPAL---------------KQDRICLFTVSD---------------------------------------------D--- 161 (343)
T ss_dssp EEEG---------------GGTEEEEEEECT---------------------------------------------T---
T ss_pred EecC---------------CCCEEEEEEecC---------------------------------------------C---
Confidence 6532 246889998872 0
Q ss_pred CCCccccccccceEEEEE--EE--ecCCceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccc--eeeeeeecc----c
Q 014962 164 CDGIKLEETETWQLRLAY--ST--TWPGMVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQR--VRRFAVGRT----R 230 (415)
Q Consensus 164 ~~g~~~~~~~~~~L~l~~--~~--~~~g~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~--L~~~a~~~~----~ 230 (415)
| ++..+. .. .....+.+++-- .|++|+++. .+.+.+|++.....+. +........ .
T Consensus 162 --~---------~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 162 --G---------HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp --S---------CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred --C---------ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 0 222221 11 222345555522 456465553 5679999996422111 111111111 1
Q ss_pred eEE--EEEEEeCCEEEEeecC-CcEEEEEEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeC-CCCcEEEEecCCCc
Q 014962 231 FMI--MLLTAHFTRIAVGDCR-DGILFYSYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSD-RKGSIAVLSCSDRL 305 (415)
Q Consensus 231 ~~i--~sI~~~~n~IlVGD~~-~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD-~~gNl~vl~~~~~~ 305 (415)
..+ ..+...+.++++++.. ..+.++..+...+++..+..-.....+.++.+-. ...+++++ .++.+.+++++..
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~- 309 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE- 309 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETT-
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCC-
Confidence 123 3444457788887754 4576666664455555544332223355666643 34567776 5788988887641
Q ss_pred CCCCCCCCccceeeeeecCccccEEEe
Q 014962 306 EDNASPECNLTPNCAYHMGEIAVSIRK 332 (415)
Q Consensus 306 ~~~~~~~~kL~~~~~fhlGd~Vt~~~~ 332 (415)
. .++.....+..|..+..+..
T Consensus 310 ----~--g~~~~~~~~~~g~~p~~i~~ 330 (343)
T 1ri6_A 310 ----Q--GLLHEKGRYAVGQGPMWVVV 330 (343)
T ss_dssp ----T--TEEEEEEEEECSSSCCEEEE
T ss_pred ----C--ceeeEccccccCCCCeeEEE
Confidence 1 35777788888888887753
No 34
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.57 E-value=0.014 Score=54.66 Aligned_cols=195 Identities=14% Similarity=0.145 Sum_probs=121.2
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc----EEEEEeCCCCCeEEEEEEEEECCee-EEEEeeecCC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS----VLSSFKLELGETGKSMELVRVGHEQ-VLVVGTSLSS 90 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~----~i~s~~l~~~E~~~si~~~~l~~~~-~lvVGT~~~~ 90 (415)
.....++++|+.+.++++..+ ..|++.|..+.+ ....+ .....+.+++.. .+.. +|++|+.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d-------~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~--~~~~~~l~~~~~--- 77 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWD-------GSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFI--DNTDLQIYVGTV--- 77 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETT-------SEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEE--ESSSEEEEEEET---
T ss_pred CcEEEEEEcCCCCEEEEEcCC-------CeEEEEEeCCCCccccceeee--ecCCceEEEEEC--CCCCcEEEEEcC---
Confidence 366789999998888776532 358888877666 33322 334566665432 2456 8888864
Q ss_pred CCCCCCCCCccccccEEEEEEE-EecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccc
Q 014962 91 GPAIMPSGEAESTKGRLIVLCI-EHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKL 169 (415)
Q Consensus 91 ~~~~~~~~e~~~~~Gri~vf~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~ 169 (415)
.|.|.+|++ ..
T Consensus 78 -------------dg~i~~wd~~~~------------------------------------------------------- 89 (342)
T 1yfq_A 78 -------------QGEILKVDLIGS------------------------------------------------------- 89 (342)
T ss_dssp -------------TSCEEEECSSSS-------------------------------------------------------
T ss_pred -------------CCeEEEEEeccC-------------------------------------------------------
Confidence 468888887 52
Q ss_pred cccccceEEEEEEEe--cCCceEEEeeeCCceEEEE-eCCeEEEEeeCCCC-------ccceeeeeeeccceEEEEEEEe
Q 014962 170 EETETWQLRLAYSTT--WPGMVLAICPYLDRYFLAS-AGNAFYVCGFPNDN-------PQRVRRFAVGRTRFMIMLLTAH 239 (415)
Q Consensus 170 ~~~~~~~L~l~~~~~--~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~~~-------~~~L~~~a~~~~~~~i~sI~~~ 239 (415)
.++..+ .. ..++|.+|+-..+.+|+.+ ..+.|.+|++...+ .+.+.. +.....+.++...
T Consensus 90 -----~~~~~~--~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 90 -----PSFQAL--TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN---TKVKNKIFTMDTN 159 (342)
T ss_dssp -----SSEEEC--BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS---SSSCCCEEEEEEC
T ss_pred -----CceEec--cccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeE---EeeCCceEEEEec
Confidence 011111 22 4567877774435535544 44568999886300 011222 2234467788888
Q ss_pred CCEEEEeecCCcEEEEEEEc-cCCeEEEEecCCCcceeEEEEee--eCCeEEEeCCCCcEEEEecCC
Q 014962 240 FTRIAVGDCRDGILFYSYHE-DARKLEQIYCDPSQRLVADCVLM--DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 240 ~n~IlVGD~~~Sv~ll~y~~-~~~~L~~varD~~~~~vta~~~L--d~d~~l~aD~~gNl~vl~~~~ 303 (415)
.+.+++|..-..+.++..+. ....+... .......+.++.+. +...++++..+|.+.++.++.
T Consensus 160 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 160 SSRLIVGMNNSQVQWFRLPLCEDDNGTIE-ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp SSEEEEEESTTEEEEEESSCCTTCCCEEE-ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred CCcEEEEeCCCeEEEEECCccccccceee-ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 88899998888887776654 22222222 22345578888887 456888889999999988755
No 35
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.55 E-value=0.024 Score=54.44 Aligned_cols=115 Identities=7% Similarity=0.035 Sum_probs=69.7
Q ss_pred cCCceEEEeeeCCceEEEEe-CCeEEEEeeCCCCccceeeeee---e---ccceEEEEEEEeCCEEEEeecC---CcEEE
Q 014962 185 WPGMVLAICPYLDRYFLASA-GNAFYVCGFPNDNPQRVRRFAV---G---RTRFMIMLLTAHFTRIAVGDCR---DGILF 254 (415)
Q Consensus 185 ~~g~V~al~~~~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~---~---~~~~~i~sI~~~~n~IlVGD~~---~Sv~l 254 (415)
..+.|.+++-..+.+|+++. ...|.+|++.. .+.+..... + ..+.........++++++|..- ..+.+
T Consensus 185 ~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i 262 (397)
T 1sq9_A 185 PSQFATSVDISERGLIATGFNNGTVQISELST--LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITL 262 (397)
T ss_dssp SCCCCCEEEECTTSEEEEECTTSEEEEEETTT--TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEE
T ss_pred CCCCceEEEECCCceEEEEeCCCcEEEEECCC--CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEE
Confidence 36678887755433355543 46699999975 233444333 2 3333344444467899998876 56655
Q ss_pred EEEEccCCeEEEEecCC------------CcceeEEEEee-eCCeEEEeCCCCcEEEEecCC
Q 014962 255 YSYHEDARKLEQIYCDP------------SQRLVADCVLM-DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 255 l~y~~~~~~L~~varD~------------~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~~~ 303 (415)
|+....+....-... ...+++++.+- +...++.+..+|.|.++....
T Consensus 263 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 263 --YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp --EETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred --EECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 454444333332221 45678888886 445788889999999998643
No 36
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.54 E-value=0.018 Score=55.13 Aligned_cols=115 Identities=9% Similarity=0.043 Sum_probs=71.8
Q ss_pred cCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCC
Q 014962 185 WPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDAR 262 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~ 262 (415)
-.++|.+++-. .|++|+.+ ....|.+|++... +.+.....+......+.....+++++.|..-..+.++..+. ..
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~ 259 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQ 259 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-Cc
Confidence 46788888754 35634443 3466999999752 23333233333334444445678999999888887765432 22
Q ss_pred eEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecC
Q 014962 263 KLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 263 ~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~ 302 (415)
.+..+..+.....++++.|-.+ ..++++..+|++.++...
T Consensus 260 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 3334444444456888887644 478888999999999854
No 37
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.54 E-value=0.07 Score=51.44 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=46.7
Q ss_pred EEEEEEEeCCEEEEeecCCc-EEEEEEEccCCeEE-EEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecCC
Q 014962 232 MIMLLTAHFTRIAVGDCRDG-ILFYSYHEDARKLE-QIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 232 ~i~sI~~~~n~IlVGD~~~S-v~ll~y~~~~~~L~-~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~~ 303 (415)
..+.....+++++.|..-.. +.++ +...++.. .+.+......|.++.|-.+ ..++.+..+|.+.++++..
T Consensus 199 ~~~~~s~~g~~l~s~s~d~~~v~iw--d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQDGTIIRVF--KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEEECTTSSEEEEEETTCSEEEEE--ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEE--ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 33444446778888888777 7555 44444443 3432336678888888644 4677888899999999754
No 38
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.04 Score=59.29 Aligned_cols=197 Identities=8% Similarity=0.067 Sum_probs=120.5
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCC--CCcEEEEEeCCCC-CeEEEEEEEEEC-C--eeEEEEeeecCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPL--SGSVLSSFKLELG-ETGKSMELVRVG-H--EQVLVVGTSLSS 90 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~--t~~~i~s~~l~~~-E~~~si~~~~l~-~--~~~lvVGT~~~~ 90 (415)
..+.++++|+.+.++.++.+ ..|++.|.. +++.+.. +..+ ..|.++ .+. + ..+++.|..
T Consensus 11 ~V~~l~~s~dg~~latg~~d-------g~I~vwd~~~~~~~~~~~--l~~h~~~V~~l---~~s~~~~~~~l~s~s~--- 75 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSD-------KTIKIFEVEGETHKLIDT--LTGHEGPVWRV---DWAHPKFGTILASCSY--- 75 (753)
T ss_dssp CEEEECCCSSSCCEEEEETT-------TEEEEEEEETTEEEEEEE--ECCCSSCEEEE---EECCTTSCSEEEEEET---
T ss_pred eeEEEEECCCCCeEEEEECC-------CcEEEEecCCCCCcccee--ccCCcCceEEE---EecCCCCCCEEEEEeC---
Confidence 55678889988877766532 358888765 3344443 3333 334443 442 2 578887754
Q ss_pred CCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccc
Q 014962 91 GPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLE 170 (415)
Q Consensus 91 ~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 170 (415)
.|.|.+|++..
T Consensus 76 -------------Dg~I~vwd~~~-------------------------------------------------------- 86 (753)
T 3jro_A 76 -------------DGKVLIWKEEN-------------------------------------------------------- 86 (753)
T ss_dssp -------------TSCEEEEEEET--------------------------------------------------------
T ss_pred -------------CCeEEEEECCC--------------------------------------------------------
Confidence 47899999882
Q ss_pred ccccceEEEE-EEEecCCceEEEeeeC---CceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE-------
Q 014962 171 ETETWQLRLA-YSTTWPGMVLAICPYL---DRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA------- 238 (415)
Q Consensus 171 ~~~~~~L~l~-~~~~~~g~V~al~~~~---g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~------- 238 (415)
.+.+.+ ......++|++++--. |.+|+++. .+.|.+|++...+. ............+.++..
T Consensus 87 ----~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 87 ----GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp ----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC--CCCEEEECCSSCEEEEEECCCC---
T ss_pred ----CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--cceeEeecCCCceEEEEecCccccc
Confidence 011112 2234578888888443 55355443 35699999986421 111122222334555543
Q ss_pred --------eCCEEEEeecCCcEEEEEEEccCCeEEEEe-cCCCcceeEEEEeeeC----CeEEEeCCCCcEEEEecCC
Q 014962 239 --------HFTRIAVGDCRDGILFYSYHEDARKLEQIY-CDPSQRLVADCVLMDV----DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 239 --------~~n~IlVGD~~~Sv~ll~y~~~~~~L~~va-rD~~~~~vta~~~Ld~----d~~l~aD~~gNl~vl~~~~ 303 (415)
.++++++|..-..+.++..+........+. -......++++.+-.+ ..++.+..+|.|.++....
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 367899999989998888776544332222 2234567888888644 4688889999999998654
No 39
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.53 E-value=0.06 Score=50.37 Aligned_cols=114 Identities=5% Similarity=0.046 Sum_probs=71.3
Q ss_pred CceEEEe-----eeCCceEEEEeC-CeEEEEeeCCCCccceeeeeeeccceEEEEEEE---eCCEEEEeecCCcEEEEEE
Q 014962 187 GMVLAIC-----PYLDRYFLASAG-NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA---HFTRIAVGDCRDGILFYSY 257 (415)
Q Consensus 187 g~V~al~-----~~~g~yLl~~vg-~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~---~~n~IlVGD~~~Sv~ll~y 257 (415)
..|.+++ .-.+.+|+++.. ..|++|++... + +.....+........... .++++++|..-..+.++..
T Consensus 165 ~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~-~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM--A-LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT--E-EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC--c-eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 3666665 235664555544 67999999862 2 222233333334444444 5789999998888888776
Q ss_pred EccC--CeEEEEecCCCcceeEEEEeeeCC--eEEEeCCCCcEEEEecCC
Q 014962 258 HEDA--RKLEQIYCDPSQRLVADCVLMDVD--TAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 258 ~~~~--~~L~~varD~~~~~vta~~~Ld~d--~~l~aD~~gNl~vl~~~~ 303 (415)
+... ..+...........++++.+-.++ .++.+..+|.|.++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 5432 233322223456678888886544 578889999999998654
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.52 E-value=0.0073 Score=58.07 Aligned_cols=113 Identities=7% Similarity=0.028 Sum_probs=72.1
Q ss_pred CCceEEEeee-CCceEEEEeC----CeEEEEeeCCCCccceeeeee-------------eccceEEEEEEEeCCEEEEee
Q 014962 186 PGMVLAICPY-LDRYFLASAG----NAFYVCGFPNDNPQRVRRFAV-------------GRTRFMIMLLTAHFTRIAVGD 247 (415)
Q Consensus 186 ~g~V~al~~~-~g~yLl~~vg----~~l~v~~~~~~~~~~L~~~a~-------------~~~~~~i~sI~~~~n~IlVGD 247 (415)
.++|.+++-- .|++|+++.. ..|.+|++... +.+..... +............+++++.|.
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 6788888743 4664555544 47999999752 33443332 333334444445678999998
Q ss_pred cCCcEEEEEEEccCCeEEEEecC-----CC---------------cceeEEEEeeeC-----------CeEEEeCCCCcE
Q 014962 248 CRDGILFYSYHEDARKLEQIYCD-----PS---------------QRLVADCVLMDV-----------DTAVVSDRKGSI 296 (415)
Q Consensus 248 ~~~Sv~ll~y~~~~~~L~~varD-----~~---------------~~~vta~~~Ld~-----------d~~l~aD~~gNl 296 (415)
.-..+.++ +....+....-.. .. ...++++.+..+ ..++.+..+|.|
T Consensus 311 ~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i 388 (397)
T 1sq9_A 311 WDGKLRFW--DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSI 388 (397)
T ss_dssp TTSEEEEE--ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEE
T ss_pred CCCeEEEE--EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcE
Confidence 77777665 4444444333330 12 667889988766 478888999999
Q ss_pred EEEecC
Q 014962 297 AVLSCS 302 (415)
Q Consensus 297 ~vl~~~ 302 (415)
.+++..
T Consensus 389 ~iw~~~ 394 (397)
T 1sq9_A 389 RWFREA 394 (397)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 998864
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.015 Score=55.05 Aligned_cols=119 Identities=7% Similarity=-0.013 Sum_probs=75.1
Q ss_pred EecCCceEEEeeeC--------------CceEEEEe-CCeEEEEeeCCCCcc--ceeeeeeeccceEEEEEE--Ee---C
Q 014962 183 TTWPGMVLAICPYL--------------DRYFLASA-GNAFYVCGFPNDNPQ--RVRRFAVGRTRFMIMLLT--AH---F 240 (415)
Q Consensus 183 ~~~~g~V~al~~~~--------------g~yLl~~v-g~~l~v~~~~~~~~~--~L~~~a~~~~~~~i~sI~--~~---~ 240 (415)
....++|++++-.. +.+|+++. ...|++|++...... .+.....+.. .+.++. .. +
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLR 221 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSS
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC--cEeEEEECCCCCCC
Confidence 44567788887543 66455443 456999999753211 1111111222 344554 44 6
Q ss_pred CEEEEeecCCcEEEEEEEccCC--eEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecCC
Q 014962 241 TRIAVGDCRDGILFYSYHEDAR--KLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 241 n~IlVGD~~~Sv~ll~y~~~~~--~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~~ 303 (415)
++++.|+.-..+.++..+.... ....+........++++.+-.+ ..++.+..+|.|.++++..
T Consensus 222 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 222 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 7899999888998887765432 3344444446677888888644 4677778899999999754
No 42
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.032 Score=55.50 Aligned_cols=126 Identities=10% Similarity=-0.002 Sum_probs=76.3
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEEeC-CeEEEEeeCCCCcc--ceeeeeeeccceEEEEEEEe---CCEEEEeec
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLASAG-NAFYVCGFPNDNPQ--RVRRFAVGRTRFMIMLLTAH---FTRIAVGDC 248 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~vg-~~l~v~~~~~~~~~--~L~~~a~~~~~~~i~sI~~~---~n~IlVGD~ 248 (415)
.++.+......+.|++|+-- .|++|+++-. ..+++|++...... .+.....+......+..... +.+|+.|+.
T Consensus 139 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 218 (450)
T 2vdu_B 139 VLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR 218 (450)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET
T ss_pred eeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC
Confidence 45555555677889998744 4564555433 55888887652111 11121222333344444555 668999998
Q ss_pred CCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 249 RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 249 ~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
-..+.++.++. ++....-......+++++.|-|...++.+..+|.|.++.+..
T Consensus 219 d~~i~vwd~~~--~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 219 DEHIKISHYPQ--CFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp TSCEEEEEESC--TTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTT
T ss_pred CCcEEEEECCC--CceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCC
Confidence 88888877643 333222223345678888877445788888899999998643
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.51 E-value=0.0088 Score=57.64 Aligned_cols=198 Identities=11% Similarity=0.114 Sum_probs=122.6
Q ss_pred CccCEEEEecCC-CEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCC-CCCeEEEEEEEEEC-CeeEEEEeeecCCCC
Q 014962 16 GTPKKVLYHSES-RLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLE-LGETGKSMELVRVG-HEQVLVVGTSLSSGP 92 (415)
Q Consensus 16 ~tp~~I~y~~~~-~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~-~~E~~~si~~~~l~-~~~~lvVGT~~~~~~ 92 (415)
.....++++|+. +.++.+..+ ..|++.|..+.+....+.+. ....+.+++. .. +..+|+.|..
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~----- 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKG-------GDIILWDYDVQNKTSFIQGMGPGDAITGMKF--NQFNTNQLFVSSI----- 139 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBT-------SCEEEEETTSTTCEEEECCCSTTCBEEEEEE--ETTEEEEEEEEET-----
T ss_pred CCEEEEEECCCCCCEEEEEcCC-------CeEEEEeCCCcccceeeecCCcCCceeEEEe--CCCCCCEEEEEeC-----
Confidence 367789999997 666666543 35999999988887777763 3445555442 23 4478887744
Q ss_pred CCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccc
Q 014962 93 AIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEET 172 (415)
Q Consensus 93 ~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 172 (415)
.|.|.+|++..
T Consensus 140 -----------d~~i~iwd~~~---------------------------------------------------------- 150 (383)
T 3ei3_B 140 -----------RGATTLRDFSG---------------------------------------------------------- 150 (383)
T ss_dssp -----------TTEEEEEETTS----------------------------------------------------------
T ss_pred -----------CCEEEEEECCC----------------------------------------------------------
Confidence 46788887761
Q ss_pred ccceEEEEE-EEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCC-EEEEeec
Q 014962 173 ETWQLRLAY-STTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFT-RIAVGDC 248 (415)
Q Consensus 173 ~~~~L~l~~-~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n-~IlVGD~ 248 (415)
..++.+. .....++|.+++-- .|++|+++. .+.|.+|++.. +.+.....+............+. +++.|..
T Consensus 151 --~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 151 --SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp --CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEECSSSCEEEEEECSSCTTEEEEEET
T ss_pred --CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEeccCCCcEEEEEECCCCCCEEEEEeC
Confidence 0222221 12234778888744 356455443 45689999853 33444333333333444444555 8888888
Q ss_pred CCcEEEEEEEccC--CeEEEEecCCCcceeEEEEeee--CCeEEEeCCCCcEEEEecCC
Q 014962 249 RDGILFYSYHEDA--RKLEQIYCDPSQRLVADCVLMD--VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 249 ~~Sv~ll~y~~~~--~~L~~varD~~~~~vta~~~Ld--~d~~l~aD~~gNl~vl~~~~ 303 (415)
-..+.++..+... ..+...- .....++++.+-. ...++.+..+|.|.++....
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 7788776554321 3333222 2566888888864 45788889999999998653
No 44
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.49 E-value=0.038 Score=52.66 Aligned_cols=173 Identities=13% Similarity=0.129 Sum_probs=106.8
Q ss_pred eeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCC
Q 014962 44 SDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGS 122 (415)
Q Consensus 44 s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~ 122 (415)
..|++.|..+++.+..+...+.. +.+ +.+. +..+|+.|+. .|.+.+|++..
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~-~~~---~~~spdg~~l~~g~~----------------dg~v~i~~~~~-------- 153 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVD-AWT---LAFSPDSQYLATGTH----------------VGKVNIFGVES-------- 153 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTC-CCC---EEECTTSSEEEEECT----------------TSEEEEEETTT--------
T ss_pred CcEEEEECCCCCEEEEEeCCCcc-EEE---EEECCCCCEEEEEcC----------------CCcEEEEEcCC--------
Confidence 46999999999888777655433 222 3343 5578888754 46788887762
Q ss_pred ccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEEEEecCCceEEEeee-CCceEE
Q 014962 123 MTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFL 201 (415)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl 201 (415)
| .....+ ..-...|.+++-- .|++|+
T Consensus 154 -------------------------------------------~--------~~~~~~--~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 154 -------------------------------------------G--------KKEYSL--DTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp -------------------------------------------C--------SEEEEE--ECSSSCEEEEEECTTSSEEE
T ss_pred -------------------------------------------C--------ceeEEe--cCCCceEEEEEECCCCCEEE
Confidence 0 011111 2234567777633 467455
Q ss_pred EE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEE
Q 014962 202 AS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280 (415)
Q Consensus 202 ~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~ 280 (415)
++ ..+.|.+|++.. .+.+.....+..+.........+.+++.|..-..+.++.. ....+...-. ....+|+++.
T Consensus 181 sg~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~--~~~~~~~~~~-~h~~~v~~~~ 255 (321)
T 3ow8_A 181 SGAIDGIINIFDIAT--GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV--QHANLAGTLS-GHASWVLNVA 255 (321)
T ss_dssp EEETTSCEEEEETTT--TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEET--TTCCEEEEEC-CCSSCEEEEE
T ss_pred EEcCCCeEEEEECCC--CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEEC--CCcceeEEEc-CCCCceEEEE
Confidence 54 345699999975 2344443333334444445556778999988888866644 3443332222 2456788888
Q ss_pred eee-CCeEEEeCCCCcEEEEecC
Q 014962 281 LMD-VDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 281 ~Ld-~d~~l~aD~~gNl~vl~~~ 302 (415)
|-. ...++.+..+|.+.+++..
T Consensus 256 ~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 256 FCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEeCCCcEEEEeCC
Confidence 864 4578888999999999864
No 45
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.48 E-value=0.08 Score=50.73 Aligned_cols=201 Identities=10% Similarity=0.099 Sum_probs=120.5
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEee
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGT 86 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT 86 (415)
.++.++.+..|+.++++|+.+.+++.... ...|+++|..+++.+..+.... .+.++ .+. +..+++++.
T Consensus 24 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~~~~~~~~~~--~v~~~---~~spdg~~l~~~~ 92 (391)
T 1l0q_A 24 VTATIPVGSNPMGAVISPDGTKVYVANAH------SNDVSIIDTATNNVIATVPAGS--SPQGV---AVSPDGKQVYVTN 92 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTEEEEEEECSS--SEEEE---EECTTSSEEEEEE
T ss_pred EEEEeecCCCcceEEECCCCCEEEEECCC------CCeEEEEECCCCeEEEEEECCC--Cccce---EECCCCCEEEEEE
Confidence 34567778889999999999877666422 2479999999999888777654 44443 343 456666653
Q ss_pred ecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCC
Q 014962 87 SLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG 166 (415)
Q Consensus 87 ~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g 166 (415)
. ..|.|.+|++..
T Consensus 93 ~---------------~~~~v~v~d~~~---------------------------------------------------- 105 (391)
T 1l0q_A 93 M---------------ASSTLSVIDTTS---------------------------------------------------- 105 (391)
T ss_dssp T---------------TTTEEEEEETTT----------------------------------------------------
T ss_pred C---------------CCCEEEEEECCC----------------------------------------------------
Confidence 3 136788887661
Q ss_pred ccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEE
Q 014962 167 IKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRI 243 (415)
Q Consensus 167 ~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~I 243 (415)
+ +. +........+.+++-- .|++|+++. .+.|++|++.. .+.+...... .......+...++++
T Consensus 106 -------~-~~--~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~--~~~~~~~~~~-~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 106 -------N-TV--AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT--KAVINTVSVG-RSPKGIAVTPDGTKV 172 (391)
T ss_dssp -------T-EE--EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEECC-SSEEEEEECTTSSEE
T ss_pred -------C-eE--EEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC--CcEEEEEecC-CCcceEEECCCCCEE
Confidence 0 11 1112344567777633 455454443 46799999875 2333332222 222334444467788
Q ss_pred EEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeC---CCCcEEEEecC
Q 014962 244 AVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSD---RKGSIAVLSCS 302 (415)
Q Consensus 244 lVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD---~~gNl~vl~~~ 302 (415)
++.....+- +..|+...++....... ...+.++.+-.+ ..++++. .++.|.++...
T Consensus 173 ~~~~~~~~~-v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 173 YVANFDSMS-ISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEEETTTTE-EEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred EEEeCCCCE-EEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 776555432 45567766665544432 346666666533 3566655 68889888853
No 46
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.46 E-value=0.1 Score=51.40 Aligned_cols=172 Identities=15% Similarity=0.121 Sum_probs=111.0
Q ss_pred eeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCc
Q 014962 44 SDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSM 123 (415)
Q Consensus 44 s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~ 123 (415)
+.|++.|..+++.+..+.- ..+.+.++. +. ..+++.|+. .|.|.+|++...
T Consensus 193 g~i~vwd~~~~~~~~~~~~-h~~~v~~l~---~~-~~~l~s~s~----------------dg~i~vwd~~~~-------- 243 (435)
T 1p22_A 193 STVRVWDVNTGEMLNTLIH-HCEAVLHLR---FN-NGMMVTCSK----------------DRSIAVWDMASP-------- 243 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-CCSCEEEEE---CC-TTEEEEEET----------------TSCEEEEECSSS--------
T ss_pred CeEEEEECCCCcEEEEEcC-CCCcEEEEE---Ec-CCEEEEeeC----------------CCcEEEEeCCCC--------
Confidence 4699999999988877653 344555544 33 357777754 468889988720
Q ss_pred cccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEEEEecCCceEEEeeeCCceEEEE
Q 014962 124 TFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLAS 203 (415)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~~ 203 (415)
. ...+. .......++|.+++. .|.+|+++
T Consensus 244 -------------------------------------------~------~~~~~-~~~~~~~~~v~~~~~-~~~~l~s~ 272 (435)
T 1p22_A 244 -------------------------------------------T------DITLR-RVLVGHRAAVNVVDF-DDKYIVSA 272 (435)
T ss_dssp -------------------------------------------S------CCEEE-EEECCCSSCEEEEEE-ETTEEEEE
T ss_pred -------------------------------------------C------Cceee-eEecCCCCcEEEEEe-CCCEEEEE
Confidence 0 01111 111345678888876 67646655
Q ss_pred e-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEee
Q 014962 204 A-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282 (415)
Q Consensus 204 v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L 282 (415)
. .+.|.+|++... +.+.....+ ...+.++...++++++|..-..+.++. ...++....-+ .....++++.+
T Consensus 273 ~~dg~i~vwd~~~~--~~~~~~~~~--~~~v~~~~~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~~-~h~~~v~~~~~- 344 (435)
T 1p22_A 273 SGDRTIKVWNTSTC--EFVRTLNGH--KRGIACLQYRDRLVVSGSSDNTIRLWD--IECGACLRVLE-GHEELVRCIRF- 344 (435)
T ss_dssp ETTSEEEEEETTTC--CEEEEEECC--SSCEEEEEEETTEEEEEETTSCEEEEE--TTTCCEEEEEC-CCSSCEEEEEC-
T ss_pred eCCCeEEEEECCcC--cEEEEEcCC--CCcEEEEEeCCCEEEEEeCCCeEEEEE--CCCCCEEEEEe-CCcCcEEEEEe-
Confidence 4 456999999762 334443322 234667777899999999888886654 44443333222 24556788877
Q ss_pred eCCeEEEeCCCCcEEEEecCC
Q 014962 283 DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 283 d~d~~l~aD~~gNl~vl~~~~ 303 (415)
+...++++..+|.|.++....
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHH
T ss_pred cCCEEEEEeCCCcEEEEECCC
Confidence 778899999999999998643
No 47
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.45 E-value=0.051 Score=50.05 Aligned_cols=206 Identities=9% Similarity=0.084 Sum_probs=118.6
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc----EEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS----VLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGP 92 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~----~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~ 92 (415)
..+.++++|+.+.++.+..+ ..|++.|..+.. .+..+. .....+.+++.....+..+|+.|..
T Consensus 13 ~v~~~~~~~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~----- 79 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSD-------QHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASY----- 79 (351)
T ss_dssp CEEEEEECSSSSEEEEEETT-------SEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEET-----
T ss_pred ceeEEEEcCCCCEEEEeeCC-------CeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcC-----
Confidence 67889999998887776533 358888876653 333333 2234455443321113578888754
Q ss_pred CCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccc
Q 014962 93 AIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEET 172 (415)
Q Consensus 93 ~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 172 (415)
.|.|.+|++.... +. +.
T Consensus 80 -----------dg~v~vwd~~~~~------------------------------------------~~---~~------- 96 (351)
T 3f3f_A 80 -----------DKTVKLWEEDPDQ------------------------------------------EE---CS------- 96 (351)
T ss_dssp -----------TSCEEEEEECTTS------------------------------------------CT---TS-------
T ss_pred -----------CCeEEEEecCCCc------------------------------------------cc---cc-------
Confidence 4789999998310 00 00
Q ss_pred ccceEEEEEEE-ecCCceEEEeeeC---CceEEEE-eCCeEEEEeeCCCCccceeeee-------------eeccceEEE
Q 014962 173 ETWQLRLAYST-TWPGMVLAICPYL---DRYFLAS-AGNAFYVCGFPNDNPQRVRRFA-------------VGRTRFMIM 234 (415)
Q Consensus 173 ~~~~L~l~~~~-~~~g~V~al~~~~---g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a-------------~~~~~~~i~ 234 (415)
...++.+... ...++|.+++-.. +.+|+++ ....|++|++.... .+.... .........
T Consensus 97 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (351)
T 3f3f_A 97 -GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS--DLRSWTLTSEMKVLSIPPANHLQSDFCL 173 (351)
T ss_dssp -SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT--CTTCCEEEEEEESCSCCCSSCSCCCEEE
T ss_pred -ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH--HhccccccccccccccccCCcccceeEE
Confidence 1233333333 4578899988543 5545544 34679999997632 121111 011112222
Q ss_pred EEEEe---CCEEEEeecCCcEEEEEEEccCCeEEEE-ecCCCcceeEEEEeeeC-----CeEEEeCCCCcEEEEecCC
Q 014962 235 LLTAH---FTRIAVGDCRDGILFYSYHEDARKLEQI-YCDPSQRLVADCVLMDV-----DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 235 sI~~~---~n~IlVGD~~~Sv~ll~y~~~~~~L~~v-arD~~~~~vta~~~Ld~-----d~~l~aD~~gNl~vl~~~~ 303 (415)
..... ++++++|..-..+ ++ +....+++..+ .-......++++.+-.+ ..++.+..+|.|.+++...
T Consensus 174 ~~~p~~~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 174 SWCPSRFSPEKLAVSALEQAI-IY-QRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EECCCSSSCCEEEEEETTEEE-EE-EECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EeccCCCCCcEEEEecCCCcE-EE-EccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 33332 7789999887776 33 33334444322 22335668889888755 3688889999999998654
No 48
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.44 E-value=0.068 Score=48.95 Aligned_cols=193 Identities=8% Similarity=0.024 Sum_probs=123.2
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMP 96 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~ 96 (415)
..+.+++ |+.+.++.+..+ ..|++.|..+.+....+... ...+.++.. ..+..++++|..
T Consensus 20 ~v~~~~~-~~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~~~~~--------- 79 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRD-------GTVRLWSKDDQWLGTVVYTG-QGFLNSVCY--DSEKELLLFGGK--------- 79 (313)
T ss_dssp CEEEEEE-EETTEEEEEETT-------SEEEEEEESSSEEEEEEEEC-SSCEEEEEE--ETTTTEEEEEET---------
T ss_pred CcEEEEe-cCCCEEEEEEcC-------CcEEEEECCCCEEEEEeecC-CccEEEEEE--CCCCCEEEEecC---------
Confidence 5667777 777776665422 36999998888777665543 445555433 235678888855
Q ss_pred CCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccce
Q 014962 97 SGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQ 176 (415)
Q Consensus 97 ~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 176 (415)
.|.+.+|++... . .+ ..
T Consensus 80 -------dg~i~~~~~~~~--------------------------------------------~----~~--------~~ 96 (313)
T 3odt_A 80 -------DTMINGVPLFAT--------------------------------------------S----GE--------DP 96 (313)
T ss_dssp -------TSCEEEEETTCC--------------------------------------------T----TS--------CC
T ss_pred -------CCeEEEEEeeec--------------------------------------------C----CC--------Cc
Confidence 467888887730 0 00 01
Q ss_pred EEEEEEEecCCceEEEeeeCCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEE-eCCEEEEeecCCcEEE
Q 014962 177 LRLAYSTTWPGMVLAICPYLDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA-HFTRIAVGDCRDGILF 254 (415)
Q Consensus 177 L~l~~~~~~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~-~~n~IlVGD~~~Sv~l 254 (415)
+..+ ....++|.+++- .+.+|+++ ..+.|.+|+.. +.+........+........ .++++++|..-..+.+
T Consensus 97 ~~~~--~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 169 (313)
T 3odt_A 97 LYTL--IGHQGNVCSLSF-QDGVVISGSWDKTAKVWKEG----SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKL 169 (313)
T ss_dssp -CEE--CCCSSCEEEEEE-ETTEEEEEETTSEEEEEETT----EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccch--hhcccCEEEEEe-cCCEEEEEeCCCCEEEEcCC----cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEE
Confidence 1111 345678888876 56545554 45568899822 33433333333333333334 6889999998888877
Q ss_pred EEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 255 YSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 255 l~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
+. ..+....-.......++++.+..++.++.+..+|.|.++....
T Consensus 170 ~d----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 170 WQ----NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHT 214 (313)
T ss_dssp EE----TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTT
T ss_pred Ee----cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCc
Confidence 64 3444555555577789999998887899999999999998653
No 49
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.44 E-value=0.0094 Score=60.75 Aligned_cols=204 Identities=13% Similarity=0.199 Sum_probs=123.5
Q ss_pred eeEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEee
Q 014962 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGT 86 (415)
Q Consensus 7 ~~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT 86 (415)
|.+++-.+...|+.++++|+.+.++.. ....+++++..+++.+..+.. ...+.+++. . ..++++|+
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~-~~~l~~~~ 463 (615)
T 1pgu_A 398 NGITKHEFGSQPKVASANNDGFTAVLT--------NDDDLLILQSFTGDIIKSVRL--NSPGSAVSL---S-QNYVAVGL 463 (615)
T ss_dssp TTEEEEECSSCEEEEEECSSSEEEEEE--------TTSEEEEEETTTCCEEEEEEC--SSCEEEEEE---C-SSEEEEEE
T ss_pred EEcccCcccCCceEEEEcCCCCEEEEe--------CCCceEEEeccCCceeeeccc--CCCceEEEE---c-CCEEEEee
Confidence 334443444456667777766544433 123588888878888877763 344555443 3 56777774
Q ss_pred ecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCC
Q 014962 87 SLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG 166 (415)
Q Consensus 87 ~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g 166 (415)
. ..|.|.+|++..
T Consensus 464 ~---------------~d~~i~~~~~~~---------------------------------------------------- 476 (615)
T 1pgu_A 464 E---------------EGNTIQVFKLSD---------------------------------------------------- 476 (615)
T ss_dssp T---------------TTSCEEEEETTE----------------------------------------------------
T ss_pred c---------------CCCeEEEEECCC----------------------------------------------------
Confidence 3 146788888772
Q ss_pred ccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeee-eccceEEEEEEE-----
Q 014962 167 IKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAV-GRTRFMIMLLTA----- 238 (415)
Q Consensus 167 ~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~-~~~~~~i~sI~~----- 238 (415)
.++....-....++|++++-- .|++|+++- ...|++|++.. .+.+..... +...........
T Consensus 477 --------~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~h~~~v~~~~~sp~~~~~ 546 (615)
T 1pgu_A 477 --------LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS--REVKTSRWAFRTSKINAISWKPAEKGA 546 (615)
T ss_dssp --------EEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEECCSCCCSSCEEEEEECCCC---
T ss_pred --------ccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC--CcceeEeecCCCCceeEEEEcCccccc
Confidence 011111112245678887733 567455553 45799999975 233333221 333444444445
Q ss_pred -----eCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 239 -----HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 239 -----~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
.+.++++|+.-..+.++.++.....+..+ ......++++.|..++.++.+..+|.|.++++..
T Consensus 547 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 547 NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL--NAHKDGVNNLLWETPSTLVSSGADACIKRWNVVL 614 (615)
T ss_dssp ---CCSCCEEEEEETTSCEEEEESSCTTCCEEET--TSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC-
T ss_pred cccccCCCEEEEEcCCCcEEEEECCCCceechhh--hcCccceEEEEEcCCCCeEEecCCceEEEEeeec
Confidence 67899999999999887765432333332 3346789999998666688899999999998653
No 50
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.40 E-value=0.064 Score=52.84 Aligned_cols=229 Identities=7% Similarity=0.063 Sum_probs=130.1
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++.+..+ ..|++.|..+++.+..+.-. ...+. .+.+. +..+|+.|..
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D-------~~i~iwd~~~~~~~~~~~~h-~~~V~---~v~~~p~~~~l~s~s~-------- 212 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSAD-------MTIKLWDFQGFECIRTMHGH-DHNVS---SVSIMPNGDHIVSASR-------- 212 (410)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCCCEEETTSSCEEECCCCC-SSCEE---EEEECSSSSEEEEEET--------
T ss_pred cEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeEEEcCC-CCCEE---EEEEeCCCCEEEEEeC--------
Confidence 55678888888776666533 34889999888877654322 12333 34443 4567777643
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
-|.|.+|++.. +.
T Consensus 213 --------D~~i~~wd~~~-----------------------------------------------------------~~ 225 (410)
T 1vyh_C 213 --------DKTIKMWEVQT-----------------------------------------------------------GY 225 (410)
T ss_dssp --------TSEEEEEETTT-----------------------------------------------------------CC
T ss_pred --------CCeEEEEECCC-----------------------------------------------------------Cc
Confidence 46788888762 01
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEE---------------
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--------------- 238 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--------------- 238 (415)
.++.+ ..-.+.|.+++.- .|.+|+.+ ..+.|.+|++... +.......+ ...+.++..
T Consensus 226 ~~~~~--~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~--~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~~~~ 299 (410)
T 1vyh_C 226 CVKTF--TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK--ECKAELREH--RHVVECISWAPESSYSSISEATGS 299 (410)
T ss_dssp EEEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCC--SSCEEEEEECCSCGGGGGGGCCSC
T ss_pred EEEEE--eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC--ceeeEecCC--CceEEEEEEcCcccccchhhhccc
Confidence 12211 2345667777644 35634333 3456999999752 222221111 223333332
Q ss_pred -------eCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecCCCcCCCCC
Q 014962 239 -------HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCSDRLEDNAS 310 (415)
Q Consensus 239 -------~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~~~~~~~~~ 310 (415)
.+.+++.|..-..+.++ +...++....-. ....+|+++.|-.+ ..++.+..+|.|.++.+...
T Consensus 300 ~~~~~~~~g~~l~sgs~D~~i~iw--d~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~------ 370 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDKTIKMW--DVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK------ 370 (410)
T ss_dssp C-------CCEEEEEETTSEEEEE--ETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS------
T ss_pred cccccCCCCCEEEEEeCCCeEEEE--ECCCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------
Confidence 15688888887777665 444443322222 24568888888544 47888899999999986431
Q ss_pred CCCccceeeeeecCccccEEEeeceeccCCCCCccccccccCCCCCceEEEEeCCcceEE
Q 014962 311 PECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVI 370 (415)
Q Consensus 311 ~~~kL~~~~~fhlGd~Vt~~~~gsl~~~~~~~~~~~~~~~~~~~~~~~ily~T~~GsIG~ 370 (415)
++...-.-| .+.|+++... ...+.++-|+.+|.|-+
T Consensus 371 ---~~~~~~~~h-~~~v~~l~~~--------------------~~~~~l~sgs~D~~i~v 406 (410)
T 1vyh_C 371 ---RCMKTLNAH-EHFVTSLDFH--------------------KTAPYVVTGSVDQTVKV 406 (410)
T ss_dssp ---CCCEEEECC-SSCEEEEEEC--------------------SSSSCEEEEETTSEEEE
T ss_pred ---ceEEEEcCC-CCcEEEEEEc--------------------CCCCEEEEEeCCCcEEE
Confidence 111111222 3356665321 12356888899998865
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.39 E-value=0.0046 Score=58.30 Aligned_cols=231 Identities=10% Similarity=0.075 Sum_probs=125.4
Q ss_pred EEEe-CCCccCEEEEec-CCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEe--CCCCCeEEEEEEEEECCeeEEEEe
Q 014962 10 RKFH-LGGTPKKVLYHS-ESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFK--LELGETGKSMELVRVGHEQVLVVG 85 (415)
Q Consensus 10 ~~i~-L~~tp~~I~y~~-~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~--l~~~E~~~si~~~~l~~~~~lvVG 85 (415)
+.+. -......++++| +.+.++.+..+ ..|++.|..+++.+..+. -.....+.++.. ..+..+++.|
T Consensus 109 ~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~ 179 (366)
T 3k26_A 109 KHYVGHGNAINELKFHPRDPNLLLSVSKD-------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADY--DLLGEKIMSC 179 (366)
T ss_dssp EEEESCCSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEE--CTTSSEEEEE
T ss_pred eeecCCCCcEEEEEECCCCCCEEEEEeCC-------CeEEEEEeecCeEEEEecccccccCceeEEEE--CCCCCEEEEe
Confidence 3344 334677888898 66666555432 359999999988877663 123344444432 1345677777
Q ss_pred eecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCC
Q 014962 86 TSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCD 165 (415)
Q Consensus 86 T~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 165 (415)
.. .|.|.+|++..... .. .+ .. ...-.|+
T Consensus 180 ~~----------------dg~i~i~d~~~~~~----------------~~--~~-------~~-----~~~~~~~----- 208 (366)
T 3k26_A 180 GM----------------DHSLKLWRINSKRM----------------MN--AI-------KE-----SYDYNPN----- 208 (366)
T ss_dssp ET----------------TSCEEEEESCSHHH----------------HH--HH-------HH-----HHTCCGG-----
T ss_pred cC----------------CCCEEEEECCCCcc----------------cc--cc-------ce-----eEEecCC-----
Confidence 44 46889998873100 00 00 00 0000000
Q ss_pred Cccccc-cccceEEEEE-EEecCCceEEEeeeCCceEEEE-eCCeEEEEeeCCCCc------------cceeeeeeeccc
Q 014962 166 GIKLEE-TETWQLRLAY-STTWPGMVLAICPYLDRYFLAS-AGNAFYVCGFPNDNP------------QRVRRFAVGRTR 230 (415)
Q Consensus 166 g~~~~~-~~~~~L~l~~-~~~~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~~~~------------~~L~~~a~~~~~ 230 (415)
+..+.. +......... .....++|.+++-. |.+|+++ ..+.|.+|++..... ..+.........
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD 287 (366)
T ss_dssp GCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC
T ss_pred CCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc
Confidence 000000 0000000011 12256788888855 6635544 456699999975321 012111112222
Q ss_pred eEEEEEEEe--CCEEEEeecCCcEEEEEEEccC---CeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEec
Q 014962 231 FMIMLLTAH--FTRIAVGDCRDGILFYSYHEDA---RKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 231 ~~i~sI~~~--~n~IlVGD~~~Sv~ll~y~~~~---~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~ 301 (415)
.....+... +++|++|+.-..+.++..+... ..+..+........++++.+-.+ ..++.+..+|.|.++++
T Consensus 288 v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 288 IWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp SSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 223333445 8899999988888887765432 13344444444678888888644 47888899999998875
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.37 E-value=0.039 Score=53.44 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=61.9
Q ss_pred CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--eCC-EEEEeecCCcEEEEEEEccCCeEEEEecCC
Q 014962 196 LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--HFT-RIAVGDCRDGILFYSYHEDARKLEQIYCDP 271 (415)
Q Consensus 196 ~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~~n-~IlVGD~~~Sv~ll~y~~~~~~L~~varD~ 271 (415)
.|++|+++. ...|.+|++... +.+.... ......+.++.. .+. ++++|..-..+.++..+.....+..+...
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~- 333 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSK--EQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN- 333 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTC--CEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES-
T ss_pred CCCEEEEEcCCCeEEEEECCCC--ceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc-
Confidence 466455554 345999999763 2232211 111224555554 455 89999988888776654333223333322
Q ss_pred CcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 272 SQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 272 ~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
....++++.+-+...++.+..+|.+.++....
T Consensus 334 ~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 334 EGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp TTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred CCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 33456666555555788889999999998654
No 53
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.36 E-value=0.038 Score=53.57 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=66.6
Q ss_pred EecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--eCC-EEEEeecCCcEEEEEE
Q 014962 183 TTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--HFT-RIAVGDCRDGILFYSY 257 (415)
Q Consensus 183 ~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~~n-~IlVGD~~~Sv~ll~y 257 (415)
..-+++|++|+-. .|++|+.+- ...|.+|++.. .+.++....+.. .|.++.. .+. +++.|..-..|.++
T Consensus 124 ~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~--~~~~~~~~~h~~--~V~~~~~~~~~~~~l~s~s~D~~v~iw-- 197 (344)
T 4gqb_B 124 YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ--QVVLSSYRAHAA--QVTCVAASPHKDSVFLSCSEDNRILLW-- 197 (344)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSS--CEEEEEECSSCTTEEEEEETTSCEEEE--
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC--CcEEEEEcCcCC--ceEEEEecCCCCCceeeeccccccccc--
Confidence 3457899999844 467455443 45699999986 233444333333 3445543 443 55667766777554
Q ss_pred EccCC-eEEEEecCCCcceeEEEEeee-CC-eEEEeCCCCcEEEEecC
Q 014962 258 HEDAR-KLEQIYCDPSQRLVADCVLMD-VD-TAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 258 ~~~~~-~L~~varD~~~~~vta~~~Ld-~d-~~l~aD~~gNl~vl~~~ 302 (415)
+...+ .+..+........++++.+-. +. .++.+..+|.|.++...
T Consensus 198 d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 198 DTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp ETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 54433 334444444455677887763 33 46678899999998754
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.36 E-value=0.16 Score=51.42 Aligned_cols=189 Identities=7% Similarity=0.079 Sum_probs=115.0
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
.+..++++|+.+.++.+..+ ..|++.|. +++.+..+.-. ...+.++ .|. +..+|+.|..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~d-------g~v~~~~~-~~~~~~~~~~~-~~~v~~~---~~s~dg~~l~~~~~-------- 405 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDD-------KTVKLWNR-NGQLLQTLTGH-SSSVRGV---AFSPDGQTIASASD-------- 405 (577)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SEEEEEET-TCCEEEEEECC-SSCEEEE---EECTTSSCEEEEET--------
T ss_pred CEEEEEECCCCCEEEEEeCC-------CEEEEEcC-CCCEEEEecCC-CCCeEEE---EECCCCCEEEEEeC--------
Confidence 55678889988877766422 35888885 45666655432 2344443 443 4577777743
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.|.+|+... .
T Consensus 406 --------d~~v~~~~~~~------------------------------------------------------------~ 417 (577)
T 2ymu_A 406 --------DKTVKLWNRNG------------------------------------------------------------Q 417 (577)
T ss_dssp --------TSEEEEECTTC------------------------------------------------------------C
T ss_pred --------CCEEEEEeCCC------------------------------------------------------------C
Confidence 35677765320 1
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEE
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGIL 253 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ 253 (415)
.++.+ ....++|++++-- ++++|+.+. ...|.+|+... +.++....+............+.+|+.|..-..+.
T Consensus 418 ~~~~~--~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~---~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~ 492 (577)
T 2ymu_A 418 LLQTL--TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 492 (577)
T ss_dssp EEEEE--ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS---CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred EEEEe--cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC---CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 22222 3346778887743 456455443 45689998753 44555444444444445555778899988877776
Q ss_pred EEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecC
Q 014962 254 FYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 254 ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~ 302 (415)
++ +.+...+..+.. ....|+++.|-.+ ..++.++.+|.|.+++++
T Consensus 493 iw--~~~~~~~~~~~~--h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 493 LW--NRNGQLLQTLTG--HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp EE--ETTSCEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EE--cCCCCEEEEEeC--CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 65 454444444432 3456888888644 478888999999999753
No 55
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.35 E-value=0.13 Score=50.14 Aligned_cols=193 Identities=10% Similarity=0.075 Sum_probs=113.3
Q ss_pred cCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCCC
Q 014962 18 PKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIMP 96 (415)
Q Consensus 18 p~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~~ 96 (415)
.+.++++|+.+.++.+..+ ..|++.|..+++.+..+.-. ...+.+ +.+. +..+|+.|..
T Consensus 126 v~~v~~s~dg~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~h-~~~v~~---~~~~p~~~~l~s~s~--------- 185 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAED-------RLIRIWDIENRKIVMILQGH-EQDIYS---LDYFPSGDKLVSGSG--------- 185 (393)
T ss_dssp EEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCC-SSCEEE---EEECTTSSEEEEEET---------
T ss_pred EEEEEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEEEccC-CCCEEE---EEEcCCCCEEEEecC---------
Confidence 5678999998887766533 35999999988877654322 223443 3443 4567776643
Q ss_pred CCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccce
Q 014962 97 SGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQ 176 (415)
Q Consensus 97 ~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 176 (415)
-|.|.+|++.. .+
T Consensus 186 -------d~~v~iwd~~~------------------------------------------------------------~~ 198 (393)
T 1erj_A 186 -------DRTVRIWDLRT------------------------------------------------------------GQ 198 (393)
T ss_dssp -------TSEEEEEETTT------------------------------------------------------------TE
T ss_pred -------CCcEEEEECCC------------------------------------------------------------Ce
Confidence 46788887762 01
Q ss_pred EEEEEEEecCCceEEEeee--CCceEEEE-eCCeEEEEeeCCCCccceeeee-------eeccceEEEEEEEeCCEEEEe
Q 014962 177 LRLAYSTTWPGMVLAICPY--LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFA-------VGRTRFMIMLLTAHFTRIAVG 246 (415)
Q Consensus 177 L~l~~~~~~~g~V~al~~~--~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a-------~~~~~~~i~sI~~~~n~IlVG 246 (415)
.. ......+.|.+++-. .|++|+++ ..+.|.+|++... +.+.... .+......+.....+.+|+.|
T Consensus 199 ~~--~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 199 CS--LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG--FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EE--EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC--CEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred eE--EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC--cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 11 122356677777754 56745444 3456999998752 2232211 112223333334467799999
Q ss_pred ecCCcEEEEEEEccCC----------eEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecC
Q 014962 247 DCRDGILFYSYHEDAR----------KLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 247 D~~~Sv~ll~y~~~~~----------~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~ 302 (415)
..-..+.++..+.... ..... -.....++.++.+-. ...++.+..+|.+.++...
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVT-YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEE-EECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEE-EecccCcEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 9988898876653211 11111 112345677777754 4577888899999998853
No 56
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.011 Score=57.96 Aligned_cols=75 Identities=20% Similarity=0.170 Sum_probs=53.9
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEE-EEC-CeeEEEEeeecCCCCC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELV-RVG-HEQVLVVGTSLSSGPA 93 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~-~l~-~~~~lvVGT~~~~~~~ 93 (415)
.....++++|+.+.++.+..+ ..|++.|..+++.+.++.+.....+.+++.. .+. +..+|+.|+.
T Consensus 215 ~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~------ 281 (437)
T 3gre_A 215 GAVSSICIDEECCVLILGTTR-------GIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS------ 281 (437)
T ss_dssp CCEEEEEECTTSCEEEEEETT-------SCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST------
T ss_pred CceEEEEECCCCCEEEEEcCC-------CeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcC------
Confidence 467788889987777766533 3599999999999998888766666666443 222 3568887744
Q ss_pred CCCCCCccccccEEEEEEEE
Q 014962 94 IMPSGEAESTKGRLIVLCIE 113 (415)
Q Consensus 94 ~~~~~e~~~~~Gri~vf~i~ 113 (415)
.|.|.+|++.
T Consensus 282 ----------dg~i~iwd~~ 291 (437)
T 3gre_A 282 ----------KTFLTIWNFV 291 (437)
T ss_dssp ----------TEEEEEEETT
T ss_pred ----------CCcEEEEEcC
Confidence 4678888776
No 57
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.29 E-value=0.06 Score=52.13 Aligned_cols=193 Identities=11% Similarity=0.013 Sum_probs=114.1
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC--CeeEEEEeeecCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG--HEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~--~~~~lvVGT~~~~~~~~ 94 (415)
..+.|+++|+.+.++.+..+ ..|++.|..+++.+..+.-. ...+.+ +.+. +..+++.|..
T Consensus 129 ~V~~v~~spdg~~l~sgs~d-------~~i~iwd~~~~~~~~~~~~h-~~~V~~---~~~~~~~~~~l~s~s~------- 190 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKD-------ICIKVWDLAQQVVLSSYRAH-AAQVTC---VAASPHKDSVFLSCSE------- 190 (344)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCC-SSCEEE---EEECSSCTTEEEEEET-------
T ss_pred CEEEEEECCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCc-CCceEE---EEecCCCCCceeeecc-------
Confidence 56788999998887766533 35999999999988765422 233443 3343 2345555532
Q ss_pred CCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccccc
Q 014962 95 MPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETET 174 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 174 (415)
-|.|.+|++.. |
T Consensus 191 ---------D~~v~iwd~~~---------------------------------------------------~-------- 202 (344)
T 4gqb_B 191 ---------DNRILLWDTRC---------------------------------------------------P-------- 202 (344)
T ss_dssp ---------TSCEEEEETTS---------------------------------------------------S--------
T ss_pred ---------ccccccccccc---------------------------------------------------c--------
Confidence 36788887762 0
Q ss_pred ceEEEEEEEecCCceEEEeee--CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEE--EeC-CEEEEeec
Q 014962 175 WQLRLAYSTTWPGMVLAICPY--LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT--AHF-TRIAVGDC 248 (415)
Q Consensus 175 ~~L~l~~~~~~~g~V~al~~~--~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~--~~~-n~IlVGD~ 248 (415)
..+..+....-...+++++-. .+++|+.+ ..+.|.+|++... +.++....+... |.+|. ..+ .+|+.|..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~--~~~~~~~~h~~~--v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST--SCVLSSAVHSQC--VTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----CCEEEECCSSC--EEEEEECSSSSCCEEEEET
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC--cEEEEEcCCCCC--EEEEEEccCCCeEEEEEeC
Confidence 011111112223456666643 45634433 3467999999762 344443433333 44554 345 45777777
Q ss_pred CCcEEEEEEEccCCeEEEEecCCCcceeEEEEee-eCCeEE-EeCCCCcEEEEecCC
Q 014962 249 RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAV-VSDRKGSIAVLSCSD 303 (415)
Q Consensus 249 ~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L-d~d~~l-~aD~~gNl~vl~~~~ 303 (415)
-..|.+ |+...+++..+ ..+..+|+++.|- ++..++ .+-.+|.|.+..++.
T Consensus 279 D~~i~v--wd~~~~~~~~~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 279 DCSLAV--LDSSLSELFRS--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp TSCEEE--ECTTCCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred CCeEEE--EECCCCcEEEE--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 777766 46666666554 3356689999885 444554 567789999998765
No 58
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.29 E-value=0.049 Score=51.15 Aligned_cols=211 Identities=11% Similarity=0.073 Sum_probs=116.9
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeec
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSL 88 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~ 88 (415)
+..++++..|..++++|+.+.+++.............|.++|..+++.+..+..... +.++.. -.+..+++|+...
T Consensus 34 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~--s~dg~~l~v~~~~ 109 (353)
T 3vgz_A 34 MLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFGATI--NNTTQTLWFGNTV 109 (353)
T ss_dssp EEEEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCSEEE--ETTTTEEEEEETT
T ss_pred hhhhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cceEEE--CCCCCEEEEEecC
Confidence 456788889999999999988877765432222356899999999999888876433 322211 1233555554331
Q ss_pred CCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcc
Q 014962 89 SSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIK 168 (415)
Q Consensus 89 ~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 168 (415)
.|.|.+|+... |+
T Consensus 110 ---------------~~~v~~~d~~~---------------------------------------------------~~- 122 (353)
T 3vgz_A 110 ---------------NSAVTAIDAKT---------------------------------------------------GE- 122 (353)
T ss_dssp ---------------TTEEEEEETTT---------------------------------------------------CC-
T ss_pred ---------------CCEEEEEeCCC---------------------------------------------------Ce-
Confidence 35676666541 00
Q ss_pred ccccccceEEEEEEEec-------CCceEEEeee-CCceEEEEe---CCeEEEEeeCCCCccceeeeeeeccceEEEEEE
Q 014962 169 LEETETWQLRLAYSTTW-------PGMVLAICPY-LDRYFLASA---GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT 237 (415)
Q Consensus 169 ~~~~~~~~L~l~~~~~~-------~g~V~al~~~-~g~yLl~~v---g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~ 237 (415)
.+..+....- ...+.++.-- .|++|+++. ++.|++|+... .+.+..............+.
T Consensus 123 -------~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 123 -------VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN--IKLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp -------EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT--TEEEEEECCCCTTCCCCEEE
T ss_pred -------eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC--CceEEEecCCCCccceEEEC
Confidence 1111100000 0013333321 455466665 45688998874 22233222122222344556
Q ss_pred EeCCEEEEeecCCcEEEEEEEccCCeEEEEecC---CCcceeEEEEee-eCCeEEEeCCC-CcEEEEec
Q 014962 238 AHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD---PSQRLVADCVLM-DVDTAVVSDRK-GSIAVLSC 301 (415)
Q Consensus 238 ~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD---~~~~~vta~~~L-d~d~~l~aD~~-gNl~vl~~ 301 (415)
..++++++++.-..+ ..|+...+++.....- ....++.++.+- |.+.+++++.. +.|+++..
T Consensus 194 ~dg~~l~~~~~~~~i--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 194 SEGKRLYTTNADGEL--ITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp TTTTEEEEECTTSEE--EEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred CCCCEEEEEcCCCeE--EEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 678899999875555 4577777665433222 223345556654 33455566554 77888874
No 59
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.29 E-value=0.12 Score=49.47 Aligned_cols=199 Identities=11% Similarity=0.058 Sum_probs=114.5
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeee
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTS 87 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~ 87 (415)
++.++.+..++.++++|+.+.++++..+ ...|+++|..+++.+..+... ..+.+ +.+. +..++++...
T Consensus 67 ~~~~~~~~~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~--~~~~~---~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 67 IATVPAGSSPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTG--KSPLG---LALSPDGKKLYVTNN 135 (391)
T ss_dssp EEEEECSSSEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECS--SSEEE---EEECTTSSEEEEEET
T ss_pred EEEEECCCCccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCC--CCcce---EEECCCCCEEEEEeC
Confidence 5677888899999999999877776532 246999999999988776643 34443 3343 4455533321
Q ss_pred cCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCc
Q 014962 88 LSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGI 167 (415)
Q Consensus 88 ~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 167 (415)
..|.|++|++..
T Consensus 136 ---------------~~~~v~~~d~~~----------------------------------------------------- 147 (391)
T 1l0q_A 136 ---------------GDKTVSVINTVT----------------------------------------------------- 147 (391)
T ss_dssp ---------------TTTEEEEEETTT-----------------------------------------------------
T ss_pred ---------------CCCEEEEEECCC-----------------------------------------------------
Confidence 146788887651
Q ss_pred cccccccceEEEEEEEecCCceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEE
Q 014962 168 KLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIA 244 (415)
Q Consensus 168 ~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~Il 244 (415)
.++ +........+.+++-- .|++|+++. ++.|++|++... +.+.... .........+...+++++
T Consensus 148 -------~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~-~~~~~~~~~~~~~g~~l~ 215 (391)
T 1l0q_A 148 -------KAV--INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--SVIDTVK-VEAAPSGIAVNPEGTKAY 215 (391)
T ss_dssp -------TEE--EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEE-CSSEEEEEEECTTSSEEE
T ss_pred -------CcE--EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--eEEEEEe-cCCCccceEECCCCCEEE
Confidence 011 1222334556666533 455464543 356999999752 2233222 122222333344577899
Q ss_pred Eeec---CCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCC-eE-EEeCCCCcEEEEecC
Q 014962 245 VGDC---RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD-TA-VVSDRKGSIAVLSCS 302 (415)
Q Consensus 245 VGD~---~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d-~~-l~aD~~gNl~vl~~~ 302 (415)
+++. ...+ ..|+...++....-.. ...+.++.+-.++ .+ +.+..++.+.++...
T Consensus 216 ~~~~~~~~~~v--~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 216 VTNVDKYFNTV--SMIDTGTNKITARIPV--GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EEEECSSCCEE--EEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEecCcCCCcE--EEEECCCCeEEEEEec--CCCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 9884 3444 5566655544332222 2245566664333 45 455778889988854
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.23 E-value=0.13 Score=47.78 Aligned_cols=194 Identities=10% Similarity=0.066 Sum_probs=113.8
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++.+..+ ..|++.|..+++.+..+.-.. ..+.+ +.+. +..+++.|..
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~~-~~v~~---~~~~~~~~~l~s~~~-------- 127 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDD-------KTLKIWDVSSGKCLKTLKGHS-NYVFC---CNFNPQSNLIVSGSF-------- 127 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCEEEEEECCS-SCEEE---EEECSSSSEEEEEET--------
T ss_pred ceEEEEEcCCCCEEEEECCC-------CEEEEEECCCCcEEEEEcCCC-CCEEE---EEEcCCCCEEEEEeC--------
Confidence 45678888887777665432 369999999888877665432 33433 3343 4577777754
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.|.+|++.. +.
T Consensus 128 --------d~~i~iwd~~~-----------------------------------------------------------~~ 140 (312)
T 4ery_A 128 --------DESVRIWDVKT-----------------------------------------------------------GK 140 (312)
T ss_dssp --------TSCEEEEETTT-----------------------------------------------------------CC
T ss_pred --------CCcEEEEECCC-----------------------------------------------------------CE
Confidence 46788888762 01
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeee-eeccceEEEEEEEeCCEEEEeecCCcE
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFA-VGRTRFMIMLLTAHFTRIAVGDCRDGI 252 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a-~~~~~~~i~sI~~~~n~IlVGD~~~Sv 252 (415)
.+..+ ....++|.+++-- .|++|+++ ..+.|.+|++... +.+.... ....+.........++++++|..-..+
T Consensus 141 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
T 4ery_A 141 CLKTL--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216 (312)
T ss_dssp EEEEE--CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred EEEEe--cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 12111 2235678887743 45645544 3456999999752 3333321 112233444555567899999888877
Q ss_pred EEEEEEccCCeEE-EEecCCCcceeEEEEe-e-eCCeEEEeCCCCcEEEEecC
Q 014962 253 LFYSYHEDARKLE-QIYCDPSQRLVADCVL-M-DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 253 ~ll~y~~~~~~L~-~varD~~~~~vta~~~-L-d~d~~l~aD~~gNl~vl~~~ 302 (415)
.++. ....+.. .+.......++..+.+ . +...++.+..+|.|.++...
T Consensus 217 ~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 217 KLWD--YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp EEEE--TTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred EEEE--CCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 6654 4444433 3333333333333333 2 33467888999999999864
No 61
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.23 E-value=0.067 Score=55.75 Aligned_cols=120 Identities=9% Similarity=0.174 Sum_probs=76.7
Q ss_pred EEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceee--eeeeccceEEEEEEEeCCEEEEeecCCcEEEE
Q 014962 180 AYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRR--FAVGRTRFMIMLLTAHFTRIAVGDCRDGILFY 255 (415)
Q Consensus 180 ~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~--~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll 255 (415)
+......+.|++|+-- +|++|+.+ ...++++|+..... +.+.. ...+......+.....+.+|+.|..-..|.++
T Consensus 485 ~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~-~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW 563 (611)
T 1nr0_A 485 VKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF-ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 563 (611)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT-EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC-ceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEE
Confidence 3345567889998833 56745544 34568999987421 22221 11233344445555577899999999999887
Q ss_pred EEEccCCeEEEEecCCC-cceeEEEEeeeCCeEEEeCCCCcEEEEec
Q 014962 256 SYHEDARKLEQIYCDPS-QRLVADCVLMDVDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 256 ~y~~~~~~L~~varD~~-~~~vta~~~Ld~d~~l~aD~~gNl~vl~~ 301 (415)
.++.....+..+ ...+ ...|+++.|..++.++.+..+|.|.+.+.
T Consensus 564 ~~~~~~~~~~~~-~~~h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 564 NMNKPSDHPIII-KGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 609 (611)
T ss_dssp ETTCTTSCCEEE-TTSSTTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred ECCCcccccchh-hccCcccCeeEEEEcCCCEEEEecCCCCEEEEec
Confidence 765433223122 2334 57899999988877888889999988875
No 62
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.14 E-value=0.26 Score=55.30 Aligned_cols=150 Identities=5% Similarity=0.008 Sum_probs=90.5
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++.+..+ ..|++.|..+++.+..+.-. ...+.| +.|. +..+++.|+.
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d-------~~i~vw~~~~~~~~~~~~~h-~~~v~~---~~~s~~~~~l~s~~~-------- 677 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGAD-------KTLQVFKAETGEKLLDIKAH-EDEVLC---CAFSSDDSYIATCSA-------- 677 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEEECCC-SSCEEE---EEECTTSSEEEEEET--------
T ss_pred cEEEEEECCCCCEEEEEeCC-------CeEEEEECCCCCEEEEeccC-CCCEEE---EEEecCCCEEEEEeC--------
Confidence 55678899998888766532 35999999999988776522 334443 4443 5578888854
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.|.|.+|++.. | .
T Consensus 678 --------d~~v~vwd~~~---------------------------------------------------~--------~ 690 (1249)
T 3sfz_A 678 --------DKKVKIWDSAT---------------------------------------------------G--------K 690 (1249)
T ss_dssp --------TSEEEEEETTT---------------------------------------------------C--------C
T ss_pred --------CCeEEEEECCC---------------------------------------------------C--------c
Confidence 46788888762 0 0
Q ss_pred eEEEEEEEecCCceEEEeeeC---CceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCC
Q 014962 176 QLRLAYSTTWPGMVLAICPYL---DRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~~---g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~ 250 (415)
.+..+ ....++|.+++-.. +. ++++. ...|.+|++... +.+.....+..+.........++++++|..-.
T Consensus 691 ~~~~~--~~~~~~v~~~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 691 LVHTY--DEHSEQVNCCHFTNKSNHL-LLATGSNDFFLKLWDLNQK--ECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp EEEEE--ECCSSCEEEEEECSSSSCC-EEEEEETTSCEEEEETTSS--SEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred eEEEE--cCCCCcEEEEEEecCCCce-EEEEEeCCCeEEEEECCCc--chhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 12212 24567788877443 33 44333 345999999762 23333223333334444445667788877776
Q ss_pred cEEEEEE
Q 014962 251 GILFYSY 257 (415)
Q Consensus 251 Sv~ll~y 257 (415)
.+.++..
T Consensus 766 ~v~vwd~ 772 (1249)
T 3sfz_A 766 TLRLWDV 772 (1249)
T ss_dssp EEEEEEG
T ss_pred eEEEEeC
Confidence 6666543
No 63
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.14 E-value=0.026 Score=54.72 Aligned_cols=193 Identities=11% Similarity=0.043 Sum_probs=114.3
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC--CeeEEEEeeecCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG--HEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~--~~~~lvVGT~~~~~~~~ 94 (415)
..+.++++|+.+.++.+..+ ..|++.|..+++.+..+.-.. ..+.++ .+. ++.+++.|..
T Consensus 141 ~V~~v~~spdg~~l~sgs~d-------g~v~iwd~~~~~~~~~~~~h~-~~v~~v---~~s~~~~~~~~s~~~------- 202 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKD-------FSVKVWDLSQKAVLKSYNAHS-SEVNCV---AACPGKDTIFLSCGE------- 202 (357)
T ss_dssp CEEEEEECSSSSEEEEEETT-------SCEEEEETTTTEEEEEECCCS-SCEEEE---EECTTCSSCEEEEET-------
T ss_pred CEEEEEECCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCCC-CCEEEE---EEccCCCceeeeecc-------
Confidence 56778999998887766533 359999999999887765432 334443 343 2345555532
Q ss_pred CCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccccc
Q 014962 95 MPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETET 174 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 174 (415)
-|.|.+|++... +
T Consensus 203 ---------dg~v~~wd~~~~---------------------------------------------------~------- 215 (357)
T 4g56_B 203 ---------DGRILLWDTRKP---------------------------------------------------K------- 215 (357)
T ss_dssp ---------TSCEEECCTTSS---------------------------------------------------S-------
T ss_pred ---------CCceEEEECCCC---------------------------------------------------c-------
Confidence 367777776520 0
Q ss_pred ceEEEEEEEecCCceEEEeee--CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEE--EeC-CEEEEeec
Q 014962 175 WQLRLAYSTTWPGMVLAICPY--LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT--AHF-TRIAVGDC 248 (415)
Q Consensus 175 ~~L~l~~~~~~~g~V~al~~~--~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~--~~~-n~IlVGD~ 248 (415)
.+..+......+.|++++-. ++.+|++| ....|++|++.. .+.++........ |.+|. ..+ .+|+.|..
T Consensus 216 -~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~--~~~~~~~~~~~~~--v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 216 -PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN--PDSAQTSAVHSQN--ITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp -CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC--GGGCEEECCCSSC--EEEEEECSSSSCCEEEEET
T ss_pred -eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC--CcEeEEEecccee--EEEEEEcCCCCCEEEEEeC
Confidence 00000001224556666633 45634333 345699999976 2344443333333 44554 344 45667776
Q ss_pred CCcEEEEEEEccCCeEEEEecCCCcceeEEEEee--eCCeEEEeCCCCcEEEEecCC
Q 014962 249 RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM--DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 249 ~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L--d~d~~l~aD~~gNl~vl~~~~ 303 (415)
-..|.+ |+.+.+++...- .....|+++.|- |...++.+-.+|.|.+..++.
T Consensus 291 D~~i~i--wd~~~~~~~~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 291 DCTVAV--LDADFSEVFRDL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp TSCEEE--ECTTSCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCEEEE--EECCCCcEeEEC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 667755 455566554432 355678999884 556788888999999999765
No 64
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.13 E-value=0.17 Score=47.27 Aligned_cols=206 Identities=10% Similarity=0.087 Sum_probs=114.7
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCe-----EEEEEEEEE-CCeeE
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGET-----GKSMELVRV-GHEQV 81 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~-----~~si~~~~l-~~~~~ 81 (415)
.++.++++..|..++++|+.+.+++.... ...|.++|..+++.+..+.+..... ......+.+ .+..+
T Consensus 81 ~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 154 (353)
T 3vgz_A 81 VTQAIHNDLKPFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT 154 (353)
T ss_dssp EEEEEEESSCCCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE
T ss_pred EEEEEecCCCcceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCE
Confidence 46778888899999999999876666432 2479999999999999888865432 111222333 23355
Q ss_pred EEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCC
Q 014962 82 LVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDD 161 (415)
Q Consensus 82 lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 161 (415)
++++... ..|+|++|+...
T Consensus 155 l~~~~~~--------------~~~~i~~~d~~~----------------------------------------------- 173 (353)
T 3vgz_A 155 VYISGIG--------------KESVIWVVDGGN----------------------------------------------- 173 (353)
T ss_dssp EEEEEES--------------SSCEEEEEETTT-----------------------------------------------
T ss_pred EEEEecC--------------CCceEEEEcCCC-----------------------------------------------
Confidence 6665431 146777776551
Q ss_pred CCCCCccccccccceEEEEEEEe-cCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeec--cceEE--E
Q 014962 162 ASCDGIKLEETETWQLRLAYSTT-WPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGR--TRFMI--M 234 (415)
Q Consensus 162 ~~~~g~~~~~~~~~~L~l~~~~~-~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~--~~~~i--~ 234 (415)
.++ +...+ ....+.+++-- .|++|+++. ++.|++|+... .+.+....... ....+ .
T Consensus 174 -------------~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (353)
T 3vgz_A 174 -------------IKL--KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD--NKILSRKKLLDDGKEHFFINI 236 (353)
T ss_dssp -------------TEE--EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT--TEEEEEEECCCSSSCCCEEEE
T ss_pred -------------Cce--EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC--CeEEEEEEcCCCCCCcccceE
Confidence 011 11112 11223333322 455455553 45788888875 23333322211 12233 4
Q ss_pred EEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeC-CCCcEEEEec
Q 014962 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSD-RKGSIAVLSC 301 (415)
Q Consensus 235 sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD-~~gNl~vl~~ 301 (415)
.+...++++++++...+ .+..|+...+++...-.-..+ .++.+-. .+.+++++ .++.|.++..
T Consensus 237 ~~s~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 237 SLDTARQRAFITDSKAA-EVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp EEETTTTEEEEEESSSS-EEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EECCCCCEEEEEeCCCC-EEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 45556889999986633 356677766655433332222 2344432 33455555 5777888874
No 65
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.13 E-value=0.15 Score=50.06 Aligned_cols=193 Identities=10% Similarity=0.067 Sum_probs=113.1
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++.+..+ ..|++.|..+++.+..+.-. ...+.++ .|. +..+|+.|..
T Consensus 110 ~V~~~~~~p~~~~l~s~s~D-------g~i~vwd~~~~~~~~~l~~h-~~~V~~v---~~~~~~~~l~sgs~-------- 170 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASED-------ATIKVWDYETGDFERTLKGH-TDSVQDI---SFDHSGKLLASCSA-------- 170 (410)
T ss_dssp CEEEEEECSSSSEEEEEESS-------SCEEEEETTTCCCCEEECCC-SSCEEEE---EECTTSSEEEEEET--------
T ss_pred cEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEecc-CCcEEEE---EEcCCCCEEEEEeC--------
Confidence 34578888887776665533 35999999988877665532 2344444 343 4578887755
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
-|.|.+|++.. + .
T Consensus 171 --------D~~i~iwd~~~---------------------------------------------------~--------~ 183 (410)
T 1vyh_C 171 --------DMTIKLWDFQG---------------------------------------------------F--------E 183 (410)
T ss_dssp --------TSCCCEEETTS---------------------------------------------------S--------C
T ss_pred --------CCeEEEEeCCC---------------------------------------------------C--------c
Confidence 35667776651 0 0
Q ss_pred eEEEEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEE
Q 014962 176 QLRLAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGIL 253 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ 253 (415)
.++.+ ....++|.+++-. .|.+|+.| ....|.+|++... +.+.....+............+++|+.|..-..+.
T Consensus 184 ~~~~~--~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 184 CIRTM--HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp EEECC--CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 11111 2235678888744 35545544 3456899999752 33433332332333344444677899998888887
Q ss_pred EEEEEccCCeEEEEecCCCcceeEEEEeee---------------------CCeEEEeCCCCcEEEEecC
Q 014962 254 FYSYHEDARKLEQIYCDPSQRLVADCVLMD---------------------VDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 254 ll~y~~~~~~L~~varD~~~~~vta~~~Ld---------------------~d~~l~aD~~gNl~vl~~~ 302 (415)
++.. ........-+ .....+.++.|-. ...++.+..+|.|.++...
T Consensus 260 vwd~--~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 260 VWVV--ATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp EEET--TTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred EEEC--CCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 6654 3333222222 2345666776643 2357888889999998854
No 66
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.07 E-value=0.013 Score=56.74 Aligned_cols=203 Identities=12% Similarity=0.113 Sum_probs=107.6
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEe---CCCCCeEEEEEEEEECCeeEEEEeeecCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFK---LELGETGKSMELVRVGHEQVLVVGTSLSSGPA 93 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~---l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~ 93 (415)
..+.++|+|++++++.+..+ ....|-..|++.+..++.....+. ..-...+.++ .|..+..+++|..
T Consensus 44 ~V~~v~fSpDG~~las~s~d-~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~---~~s~d~~~l~~s~------ 113 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSL-SSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDV---AWVSEKGILVASD------ 113 (357)
T ss_dssp EEEEEEECSSSCEEEEEECS-SSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEE---EEETTTEEEEEET------
T ss_pred CEEEEEECCCCCEEEEEcCC-CCccccCeEEEEECCCCCcceeEecccCCCCCCEEEE---EEcCCCCEEEEEC------
Confidence 46789999999888766543 224567789999877654322111 1112234443 3333333444432
Q ss_pred CCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccc
Q 014962 94 IMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETE 173 (415)
Q Consensus 94 ~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 173 (415)
.|.|.+|++... +.+.
T Consensus 114 ----------dg~v~lWd~~~~---------------------------------------------------~~~~--- 129 (357)
T 4g56_B 114 ----------SGAVELWEILEK---------------------------------------------------ESLL--- 129 (357)
T ss_dssp ----------TSCEEEC-----------------------------------------------------------C---
T ss_pred ----------CCEEEEeecccc---------------------------------------------------ceeE---
Confidence 367888888730 0000
Q ss_pred cceEEEEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--eCC-EEEEeec
Q 014962 174 TWQLRLAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--HFT-RIAVGDC 248 (415)
Q Consensus 174 ~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~~n-~IlVGD~ 248 (415)
..++ ....-.++|++|+-. .|++|+.+ ....|.+|++.. .+.+.....+.. .+.+|.. .++ +++.|..
T Consensus 130 ~~~~---~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~--~~~~~~~~~h~~--~v~~v~~s~~~~~~~~s~~~ 202 (357)
T 4g56_B 130 VNKF---AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ--KAVLKSYNAHSS--EVNCVAACPGKDTIFLSCGE 202 (357)
T ss_dssp CCCE---EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT--TEEEEEECCCSS--CEEEEEECTTCSSCEEEEET
T ss_pred EEee---ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC--CcEEEEEcCCCC--CEEEEEEccCCCceeeeecc
Confidence 0011 123446889998854 45645544 345699999975 233333222222 3555554 343 5666666
Q ss_pred CCcEEEEEEEccCCeE-EEEecCCCcceeEEEEeeeC-C-eEEEeCCCCcEEEEecC
Q 014962 249 RDGILFYSYHEDARKL-EQIYCDPSQRLVADCVLMDV-D-TAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 249 ~~Sv~ll~y~~~~~~L-~~varD~~~~~vta~~~Ld~-d-~~l~aD~~gNl~vl~~~ 302 (415)
-..+.++ +....+. ..+........++++.|-.+ + .+++++.+|.|.++...
T Consensus 203 dg~v~~w--d~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 203 DGRILLW--DTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp TSCEEEC--CTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred CCceEEE--ECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 5666554 4433322 22222334556788887633 3 56678999999999854
No 67
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.07 E-value=0.093 Score=53.18 Aligned_cols=187 Identities=7% Similarity=0.075 Sum_probs=112.0
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~ 94 (415)
..++.++++|+.+.++.+..+ ..|++.|. +++.+..+.-. ...+.+ +.|. +..+|++|..
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d-------~~v~~~~~-~~~~~~~~~~~-~~~v~~---~~~s~d~~~l~~~~~------- 446 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDD-------KTVKLWNR-NGQLLQTLTGH-SSSVWG---VAFSPDDQTIASASD------- 446 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETT-------SEEEEECT-TCCEEEEEECC-SSCEEE---EEECTTSSEEEEEET-------
T ss_pred CCeEEEEECCCCCEEEEEeCC-------CEEEEEeC-CCCEEEEecCC-CCCeEE---EEECCCCCEEEEEcC-------
Confidence 356778888888777665422 35888884 45666655432 233443 3443 5677877644
Q ss_pred CCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccccc
Q 014962 95 MPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETET 174 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 174 (415)
.|.|.+|+...
T Consensus 447 ---------d~~v~~w~~~~------------------------------------------------------------ 457 (577)
T 2ymu_A 447 ---------DKTVKLWNRNG------------------------------------------------------------ 457 (577)
T ss_dssp ---------TSEEEEEETTS------------------------------------------------------------
T ss_pred ---------CCEEEEEECCC------------------------------------------------------------
Confidence 35677776430
Q ss_pred ceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcE
Q 014962 175 WQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGI 252 (415)
Q Consensus 175 ~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv 252 (415)
..++.+ ....++|++++-- .|++|+.+. ...|++|+... +.++....+......+.....+.+++.|+.-..|
T Consensus 458 ~~~~~~--~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~---~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v 532 (577)
T 2ymu_A 458 QLLQTL--TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 532 (577)
T ss_dssp CEEEEE--ECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS---CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred CEEEEE--cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC---CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEE
Confidence 122222 3456788888733 467454443 35689998643 4455544444443344444567789999888888
Q ss_pred EEEEEEccCCeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEE
Q 014962 253 LFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVL 299 (415)
Q Consensus 253 ~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl 299 (415)
.++. .....+..+. .....|+++.|..+ +.++.+..+|.|++.
T Consensus 533 ~lwd--~~~~~~~~~~--~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 533 KLWN--RNGQLLQTLT--GHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp EEEC--TTSCEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred EEEe--CCCCEEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 7764 4444444443 24567888888744 477888888988765
No 68
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.06 E-value=0.15 Score=48.70 Aligned_cols=197 Identities=9% Similarity=0.014 Sum_probs=116.9
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCC--CeEEEEEEEEEC-CeeEEEEeeecCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELG--ETGKSMELVRVG-HEQVLVVGTSLSSGPA 93 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~--E~~~si~~~~l~-~~~~lvVGT~~~~~~~ 93 (415)
....++++|+.+.++.+..+. .|+|.|..+...+....+..+ ..+. .+.+. +..+|+.|..
T Consensus 18 ~v~~l~~sp~g~~las~~~D~-------~i~iw~~~~~~~~~~~~~~~~h~~~v~---~~~~sp~g~~l~s~s~------ 81 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDR-------RIRIWGTEGDSWICKSVLSEGHQRTVR---KVAWSPCGNYLASASF------ 81 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTS-------CEEEEEEETTEEEEEEEECSSCSSCEE---EEEECTTSSEEEEEET------
T ss_pred cEEEEEECCCCCEEEEEcCCC-------eEEEEEcCCCcceeeeeeccccCCcEE---EEEECCCCCEEEEEEC------
Confidence 346789999998887765433 488888777664433333222 3344 34443 4578887754
Q ss_pred CCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccc
Q 014962 94 IMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETE 173 (415)
Q Consensus 94 ~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 173 (415)
-|.+.+|++..
T Consensus 82 ----------D~~v~iw~~~~----------------------------------------------------------- 92 (345)
T 3fm0_A 82 ----------DATTCIWKKNQ----------------------------------------------------------- 92 (345)
T ss_dssp ----------TSCEEEEEECC-----------------------------------------------------------
T ss_pred ----------CCcEEEEEccC-----------------------------------------------------------
Confidence 35677777762
Q ss_pred cceEEEEEE-EecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCc-cceeeeeeeccceEEEEEEEeCCEEEEeecC
Q 014962 174 TWQLRLAYS-TTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNP-QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCR 249 (415)
Q Consensus 174 ~~~L~l~~~-~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~-~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~ 249 (415)
..++.+.. ..-.++|.+|+-- .|++|+.+ ....|++|++..... ..+.....+......+.....+++|+.|..-
T Consensus 93 -~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 93 -DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp -C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred -CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 02222222 2346788888744 46645443 345699999975321 1122212222233334444567889999988
Q ss_pred CcEEEEEEEccCCeEEEE-ecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEec
Q 014962 250 DGILFYSYHEDARKLEQI-YCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 250 ~Sv~ll~y~~~~~~L~~v-arD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~ 301 (415)
..+.++..+. +....+ --......|+++.|-.+ ..++.+..+|.|.+.+.
T Consensus 172 ~~i~~w~~~~--~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 172 DTVKLYREEE--DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SCEEEEEEET--TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CcEEEEEecC--CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 8898876654 322211 12234567888888644 47888899999999874
No 69
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.01 E-value=0.28 Score=47.56 Aligned_cols=112 Identities=12% Similarity=0.037 Sum_probs=60.1
Q ss_pred ecCCceEEEeee-CCceEEEEe---------CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEE
Q 014962 184 TWPGMVLAICPY-LDRYFLASA---------GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGIL 253 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~v---------g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ 253 (415)
...+.+.+++-- .|++|+++. ...|++|++.. .+.+..... ........+...++++++.....+-
T Consensus 251 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~--~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~- 326 (433)
T 3bws_A 251 DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK--EKLIDTIGP-PGNKRHIVSGNTENKIYVSDMCCSK- 326 (433)
T ss_dssp CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT--TEEEEEEEE-EECEEEEEECSSTTEEEEEETTTTE-
T ss_pred cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC--CcEEeeccC-CCCcceEEECCCCCEEEEEecCCCE-
Confidence 345567776643 455455554 34789999875 233333221 1122233344456788777655542
Q ss_pred EEEEEccCCeEEEEecCCCcceeEEEEeeeCC-eEEEeCC---------------CCcEEEEec
Q 014962 254 FYSYHEDARKLEQIYCDPSQRLVADCVLMDVD-TAVVSDR---------------KGSIAVLSC 301 (415)
Q Consensus 254 ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d-~~l~aD~---------------~gNl~vl~~ 301 (415)
+..|+...+++...-. ....+.++.+-.++ .+++++. +|.|+++..
T Consensus 327 v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp EEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred EEEEECCCCcEEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 4556766665544332 23456666665333 4555544 357887774
No 70
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.25 Score=46.77 Aligned_cols=116 Identities=14% Similarity=0.052 Sum_probs=71.4
Q ss_pred cCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--e--CCEEEEeecCCcEEEEEEE
Q 014962 185 WPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--H--FTRIAVGDCRDGILFYSYH 258 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~--~n~IlVGD~~~Sv~ll~y~ 258 (415)
..++|.+|+-- .|.+|+.+- ...|.+|+....+.+.+.....+.. .|.++.. . +.+++.|..-..|.++.+.
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG--TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC--cEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 46778888743 456344433 4569999886421122322222222 3444443 3 3478888888899888876
Q ss_pred ccCC------eEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecC
Q 014962 259 EDAR------KLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 259 ~~~~------~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~ 302 (415)
.... .....-.+....+|.++.+-++..++.+..+|.|.+++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEV 279 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEE
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcC
Confidence 4311 2222223446678999998766788888899999998853
No 71
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.98 E-value=0.26 Score=46.75 Aligned_cols=97 Identities=9% Similarity=0.040 Sum_probs=56.1
Q ss_pred EEE-EeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEE
Q 014962 200 FLA-SAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278 (415)
Q Consensus 200 Ll~-~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta 278 (415)
|+. +....|.+|+... +.+.....+..+.....+...+.+|+.|..-..+.++...........+.. ...+.+
T Consensus 187 l~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~---~~~v~~ 260 (343)
T 2xzm_R 187 FASVGWDGRLKVWNTNF---QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA---GSTINQ 260 (343)
T ss_dssp EEEEETTSEEEEEETTT---EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC---SSCEEE
T ss_pred EEEEcCCCEEEEEcCCC---ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC---CCcEEE
Confidence 443 3456789999432 223332333334444445557789999998888877765322222222221 224777
Q ss_pred EEeeeCCeEEEeCCCCcEEEEecC
Q 014962 279 CVLMDVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 279 ~~~Ld~d~~l~aD~~gNl~vl~~~ 302 (415)
+.|-.+..++++-.++.+.++...
T Consensus 261 v~~sp~~~~la~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 261 IAFNPKLQWVAVGTDQGVKIFNLM 284 (343)
T ss_dssp EEECSSSCEEEEEESSCEEEEESS
T ss_pred EEECCCCCEEEEECCCCEEEEEeC
Confidence 777555556655566778888754
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.92 E-value=0.34 Score=47.12 Aligned_cols=199 Identities=9% Similarity=0.072 Sum_probs=116.8
Q ss_pred CCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCe--------------EEEEEEEEEC-Ce
Q 014962 15 GGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGET--------------GKSMELVRVG-HE 79 (415)
Q Consensus 15 ~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~--------------~~si~~~~l~-~~ 79 (415)
......++++|+.+.++.++ + ..+++.+..+++.+..+.-..... -..+..+.|. +.
T Consensus 64 ~~~V~~v~fspdg~~la~g~-~-------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg 135 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGC-N-------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 135 (393)
T ss_dssp SSCCCEEEECTTSSEEEEEC-B-------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS
T ss_pred CCEEEEEEECCCCCEEEEEc-C-------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC
Confidence 34678899999988777653 2 248888888888766554322110 0013445554 45
Q ss_pred eEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCC
Q 014962 80 QVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSP 159 (415)
Q Consensus 80 ~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (415)
.+|+.|.. .|.|.+|++..
T Consensus 136 ~~l~s~~~----------------d~~i~iwd~~~--------------------------------------------- 154 (393)
T 1erj_A 136 KFLATGAE----------------DRLIRIWDIEN--------------------------------------------- 154 (393)
T ss_dssp SEEEEEET----------------TSCEEEEETTT---------------------------------------------
T ss_pred CEEEEEcC----------------CCeEEEEECCC---------------------------------------------
Confidence 77777643 36778887662
Q ss_pred CCCCCCCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEE
Q 014962 160 DDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT 237 (415)
Q Consensus 160 ~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~ 237 (415)
+..+..+ ..-.++|++++-. .|.+|+.+. ...|.+|++... +.+.... .........+.
T Consensus 155 --------------~~~~~~~--~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~-~~~~v~~~~~~ 215 (393)
T 1erj_A 155 --------------RKIVMIL--QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--QCSLTLS-IEDGVTTVAVS 215 (393)
T ss_dssp --------------TEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEE-CSSCEEEEEEC
T ss_pred --------------CcEEEEE--ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--eeEEEEE-cCCCcEEEEEE
Confidence 0012112 2346788888754 355455544 456899999752 2222212 22233333444
Q ss_pred E-eCCEEEEeecCCcEEEEEEEccCCeEEEEec------CCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecCC
Q 014962 238 A-HFTRIAVGDCRDGILFYSYHEDARKLEQIYC------DPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 238 ~-~~n~IlVGD~~~Sv~ll~y~~~~~~L~~var------D~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~~ 303 (415)
. .+++|++|..-..+.++ +...+.+...-. .....+++++.|-.+ ..++.+..+|.|.++.+..
T Consensus 216 ~~~~~~l~~~s~d~~v~iw--d~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVW--DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp STTCCEEEEEETTSCEEEE--ETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCCEEEEEcCCCcEEEE--ECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 3 56789999888888665 444444332221 234567888888644 4788889999999998643
No 73
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.92 E-value=0.33 Score=46.95 Aligned_cols=175 Identities=11% Similarity=0.060 Sum_probs=90.1
Q ss_pred EEecCCceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEE--EEeCCEEEEeecC--CcEEEEE
Q 014962 182 STTWPGMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL--TAHFTRIAVGDCR--DGILFYS 256 (415)
Q Consensus 182 ~~~~~g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI--~~~~n~IlVGD~~--~Sv~ll~ 256 (415)
..+..+.|++|+-- .|++|+.+....+.+|..... +.+...........+.++ ...+.+++.+-.- ..+.+..
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTG--SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTC--CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EeCCCCceEEEEEccCCceEEeccceeEEEEEeccC--cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 34467889998732 577566666777888877652 222221122222334444 4566677776543 3456666
Q ss_pred EEccCCeEEE--E-ecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecCCCcCCCCCCCCccceeeeeecCccccEEEe
Q 014962 257 YHEDARKLEQ--I-YCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRK 332 (415)
Q Consensus 257 y~~~~~~L~~--v-arD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~~~~~~~~~~~~kL~~~~~fhlGd~Vt~~~~ 332 (415)
|+........ . .-.....+|+++.|-.+ ..++.+..+|.|.++.... . +.+...-.-| ...|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-------~-~~~~~~~~gH-~~~V~~v~- 319 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-------L-SMSKIFKQAH-SFAITEVT- 319 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT-------T-EEEEEETTSS-SSCEEEEE-
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC-------C-cEEEEecCcc-cCCEEEEE-
Confidence 6654432211 1 11223456888887533 4677788899999998532 1 1222211223 34567663
Q ss_pred eceeccCCCCCccccccccCCCCCceEEEEeCCcceEEEEecC------hHHHHHHHHHHHH
Q 014962 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPIS------SEEYELLEAVQAR 388 (415)
Q Consensus 333 gsl~~~~~~~~~~~~~~~~~~~~~~~ily~T~~GsIG~l~pl~------~~~~~~L~~LQ~~ 388 (415)
+. | ....|+-|+.+|+|=+. .|+ ....+.|.+||.+
T Consensus 320 --fS---p--------------dg~~laS~S~D~tvrvw-~ip~~~~~~~s~~~~l~kl~~~ 361 (365)
T 4h5i_A 320 --IS---P--------------DSTYVASVSAANTIHII-KLPLNYANYTSMKQKISKLEHH 361 (365)
T ss_dssp --EC---T--------------TSCEEEEEETTSEEEEE-ECCTTTTC--------------
T ss_pred --EC---C--------------CCCEEEEEeCCCeEEEE-EcCCCCcCccCccccceeeecc
Confidence 21 2 23568888999999665 342 2344566666654
No 74
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.24 Score=45.23 Aligned_cols=110 Identities=8% Similarity=0.066 Sum_probs=69.8
Q ss_pred ecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCc-cceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEcc
Q 014962 184 TWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNP-QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~-~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
..+++|.+++-. .|++|+++ ....+.+|++..... +.+.... .....+.++...++++++|..-..+.++. .
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~l~~~~~d~~i~~~d---~ 131 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI--GHQGNVCSLSFQDGVVISGSWDKTAKVWK---E 131 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC--CCSSCEEEEEEETTEEEEEETTSEEEEEE---T
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh--hcccCEEEEEecCCEEEEEeCCCCEEEEc---C
Confidence 347889998854 45645544 344588998875321 1222222 22335677777899999999988887765 2
Q ss_pred CCeEEEEecCCCcceeEEEEeee--CCeEEEeCCCCcEEEEe
Q 014962 261 ARKLEQIYCDPSQRLVADCVLMD--VDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 261 ~~~L~~varD~~~~~vta~~~Ld--~d~~l~aD~~gNl~vl~ 300 (415)
...+..+. .....+.++.+.. .+.++.+..+|.|.++.
T Consensus 132 ~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 132 GSLVYNLQ--AHNASVWDAKVVSFSENKFLTASADKTIKLWQ 171 (313)
T ss_dssp TEEEEEEE--CCSSCEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CcEEEecc--cCCCceeEEEEccCCCCEEEEEECCCCEEEEe
Confidence 22223332 2455677777764 56889999999999987
No 75
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.094 Score=52.00 Aligned_cols=106 Identities=12% Similarity=0.128 Sum_probs=62.2
Q ss_pred cCCceEEEeeeCCceEEEE-eCCeEEEEeeCCCCccceeeeeee-----------------------ccceEEEEEEE--
Q 014962 185 WPGMVLAICPYLDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVG-----------------------RTRFMIMLLTA-- 238 (415)
Q Consensus 185 ~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~-----------------------~~~~~i~sI~~-- 238 (415)
-.++|.+++--.|++|+.+ ..+.|.+|++... +.+...... .....+.+|..
T Consensus 240 h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 240 HKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTG--KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CSSCEEEEEECSTTEEEEEESSSEEEEEETTTC--CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCceEEEEECCCCEEEEEeCCCeEEEEECCCC--cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 4578888873367745544 3456999999752 333332211 11223555554
Q ss_pred eCCEEEEee-cCCcEEEEEE-EccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCC
Q 014962 239 HFTRIAVGD-CRDGILFYSY-HEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292 (415)
Q Consensus 239 ~~n~IlVGD-~~~Sv~ll~y-~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~ 292 (415)
.+++|+++. --..+.++.. +...++|..+..=.....+.++.+..+..++..+.
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECC
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEec
Confidence 467888887 6778888887 34444444443322336677888766555666655
No 76
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.89 E-value=0.38 Score=47.23 Aligned_cols=111 Identities=11% Similarity=0.014 Sum_probs=73.8
Q ss_pred ecCCceEEEeeeCCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCC
Q 014962 184 TWPGMVLAICPYLDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDAR 262 (415)
Q Consensus 184 ~~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~ 262 (415)
...++|.+++.-.+. |+++ ..+.|.+|++... +.+.....+ ...+.++...++++++|+.-..+.++ +....
T Consensus 197 ~h~~~v~~~~~~~~~-l~s~s~dg~i~~wd~~~~--~~~~~~~~~--~~~v~~~~~~~~~l~~~~~dg~i~iw--d~~~~ 269 (445)
T 2ovr_B 197 GHTSTVRCMHLHEKR-VVSGSRDATLRVWDIETG--QCLHVLMGH--VAAVRCVQYDGRRVVSGAYDFMVKVW--DPETE 269 (445)
T ss_dssp CCSSCEEEEEEETTE-EEEEETTSEEEEEESSSC--CEEEEEECC--SSCEEEEEECSSCEEEEETTSCEEEE--EGGGT
T ss_pred CCCCcEEEEEecCCE-EEEEeCCCEEEEEECCCC--cEEEEEcCC--cccEEEEEECCCEEEEEcCCCEEEEE--ECCCC
Confidence 346778888764444 5554 4567999999862 334332222 23466666688999999998888665 44444
Q ss_pred eEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 263 KLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 263 ~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
+....-. .....++++.+ +...++.+..+|.|.++....
T Consensus 270 ~~~~~~~-~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~ 308 (445)
T 2ovr_B 270 TCLHTLQ-GHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVET 308 (445)
T ss_dssp EEEEEEC-CCSSCEEEEEE-CSSEEEEEETTSCEEEEETTT
T ss_pred cEeEEec-CCCCceEEEEE-CCCEEEEEeCCCeEEEEECCC
Confidence 4333222 34557788888 777899999999999998643
No 77
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.89 E-value=0.064 Score=51.37 Aligned_cols=49 Identities=10% Similarity=0.137 Sum_probs=37.5
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCC
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLEL 64 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~ 64 (415)
+++|+....|+.|+++++.++|+... +...|.++|+.+++++..+.+..
T Consensus 77 ~~~i~~~~~p~~i~~~~~g~lyv~~~-------~~~~v~~iD~~t~~~~~~i~~g~ 125 (328)
T 3dsm_A 77 VGRITGFTSPRYIHFLSDEKAYVTQI-------WDYRIFIINPKTYEITGYIECPD 125 (328)
T ss_dssp EEEEECCSSEEEEEEEETTEEEEEEB-------SCSEEEEEETTTTEEEEEEECTT
T ss_pred EEEcCCCCCCcEEEEeCCCeEEEEEC-------CCCeEEEEECCCCeEEEEEEcCC
Confidence 36788888999999988875544321 24579999999999988888755
No 78
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.87 E-value=0.2 Score=48.59 Aligned_cols=117 Identities=8% Similarity=0.006 Sum_probs=67.8
Q ss_pred ecCCceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeee-----eeeccceEEEEEE--EeC-CEEEEeecCCcEEE
Q 014962 184 TWPGMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRF-----AVGRTRFMIMLLT--AHF-TRIAVGDCRDGILF 254 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~-----a~~~~~~~i~sI~--~~~-n~IlVGD~~~Sv~l 254 (415)
...++|++++-- .|++|+.+-...|.+|++.... +.+... .+......+.++. ..+ ++++.|..-..+.+
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSADDLRINLWHLEITD-RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEE-EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCC-ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 356788888743 4665777766679999998421 222211 0111122345554 455 78999998888877
Q ss_pred EEEEccCC---eEEEEecCCCc----------ceeEEEEeeeCC-eEEEeCCCCcEEEEecC
Q 014962 255 YSYHEDAR---KLEQIYCDPSQ----------RLVADCVLMDVD-TAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 255 l~y~~~~~---~L~~varD~~~----------~~vta~~~Ld~d-~~l~aD~~gNl~vl~~~ 302 (415)
+..+.... .+..+.....+ ..++++.|-.++ .+++++. |.|.++...
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 65443221 02333222111 278888886544 6666677 999999865
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.81 E-value=0.08 Score=50.42 Aligned_cols=73 Identities=14% Similarity=0.151 Sum_probs=49.4
Q ss_pred CccCEEEEec-CCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCC
Q 014962 16 GTPKKVLYHS-ESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPA 93 (415)
Q Consensus 16 ~tp~~I~y~~-~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~ 93 (415)
.....++++| ..+.++.+..+ ..|++.|..+++.+..+.+ .+.+.++...... +..++++|+.
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------ 164 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFD-------KTLKVWDTNTLQTADVFNF--EETVYSHHMSPVSTKHCLVAVGTR------ 164 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETT-------SEEEEEETTTTEEEEEEEC--SSCEEEEEECSSCSSCCEEEEEES------
T ss_pred CcEEEEEEccCCCcEEEEEeCC-------CeEEEeeCCCCccceeccC--CCceeeeEeecCCCCCcEEEEEcC------
Confidence 4667888888 45555554322 4699999999998887774 4455555544333 3458888855
Q ss_pred CCCCCCccccccEEEEEEEE
Q 014962 94 IMPSGEAESTKGRLIVLCIE 113 (415)
Q Consensus 94 ~~~~~e~~~~~Gri~vf~i~ 113 (415)
.|.|.+|++.
T Consensus 165 ----------~~~v~~~d~~ 174 (408)
T 4a11_B 165 ----------GPKVQLCDLK 174 (408)
T ss_dssp ----------SSSEEEEESS
T ss_pred ----------CCeEEEEeCC
Confidence 4688898887
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.78 E-value=0.19 Score=53.32 Aligned_cols=116 Identities=12% Similarity=0.090 Sum_probs=73.1
Q ss_pred ecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccC
Q 014962 184 TWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
...++|.+++-- .|++|+++- ...|.+|++... +.+.....+............+.+|++|+.-..+.++.++...
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc
Confidence 457889888844 456455543 356999999752 3344333333333444444567799999988888776654322
Q ss_pred CeEEEEecCCCcceeEEEEee--eCCeEEEeCCCCcEEEEecCC
Q 014962 262 RKLEQIYCDPSQRLVADCVLM--DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 262 ~~L~~varD~~~~~vta~~~L--d~d~~l~aD~~gNl~vl~~~~ 303 (415)
.+...-. .....++++.+- +...++.+..+|.|.++....
T Consensus 131 -~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 131 -ALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp -EEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred -eEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 3332222 244568888886 345788899999999998643
No 81
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.78 E-value=0.31 Score=44.60 Aligned_cols=112 Identities=11% Similarity=0.140 Sum_probs=66.3
Q ss_pred ceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecCCcEEEEEEEccCCe
Q 014962 188 MVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCRDGILFYSYHEDARK 263 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~~~~ 263 (415)
.+.+|+-- +|+ |+++- ++.|++|+... +.+...........+..|... .+.|+|+|....=.+..|+.+...
T Consensus 165 ~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g---~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 165 FPNGVVVNDKQE-IFISDNRAHCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL 240 (286)
T ss_dssp SEEEEEECSSSE-EEEEEGGGTEEEEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE
T ss_pred CcEEEEECCCCC-EEEEECCCCEEEEEcCCC---CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE
Confidence 35666633 466 66653 67899998753 334332221101234555543 346888887653234667777666
Q ss_pred EEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 264 L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
+..+........+.++.+-.++.++++|.++.|.++++..
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 241 ISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 6666655444445566654455777778888899998754
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.77 E-value=0.37 Score=45.73 Aligned_cols=94 Identities=14% Similarity=0.054 Sum_probs=59.9
Q ss_pred eEEEe-eeCCceEEEEe-C--CeEEEEeeCCCCccceeeeeeecc--ceEEEEEEEeCCEEEEeec-CCcEEEEEEEccC
Q 014962 189 VLAIC-PYLDRYFLASA-G--NAFYVCGFPNDNPQRVRRFAVGRT--RFMIMLLTAHFTRIAVGDC-RDGILFYSYHEDA 261 (415)
Q Consensus 189 V~al~-~~~g~yLl~~v-g--~~l~v~~~~~~~~~~L~~~a~~~~--~~~i~sI~~~~n~IlVGD~-~~Sv~ll~y~~~~ 261 (415)
+.+|+ .=.|++|+++. + +.|.+|++...+ ..++....... ...-..+...+++|++++. -..+.+++++.+.
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-GTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEEEEEEECTTT-CCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred cccEEECCCCCEEEEECCCCCCEEEEEEEcCCC-CcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 34444 22577665654 3 679999997321 12333222221 2233445567889999984 5789999999989
Q ss_pred CeEEEEecCCCcceeEEEEeee
Q 014962 262 RKLEQIYCDPSQRLVADCVLMD 283 (415)
Q Consensus 262 ~~L~~varD~~~~~vta~~~Ld 283 (415)
+++..+.....-..++|+.|+|
T Consensus 340 g~~~~~~~~~~~~~p~~v~~~~ 361 (361)
T 3scy_A 340 GLLTDIKKDIKVDKPVCLKFVD 361 (361)
T ss_dssp CCEEECSCCEECSSEEEEEEEC
T ss_pred CcEeecceeeeCCCCeEEEEcC
Confidence 9999888765555678888764
No 83
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.77 E-value=0.057 Score=52.48 Aligned_cols=200 Identities=9% Similarity=0.039 Sum_probs=113.2
Q ss_pred CccCEEEEecCCC-EEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEe-CCCCCeEEEEEEEEECCeeEEEEeeecCCCCC
Q 014962 16 GTPKKVLYHSESR-LLIVMRTELNNDTCSSDICCVDPLSGSVLSSFK-LELGETGKSMELVRVGHEQVLVVGTSLSSGPA 93 (415)
Q Consensus 16 ~tp~~I~y~~~~~-~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~-l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~ 93 (415)
.....++++|+.+ .++.+..+ ..|++.|..+++.+..+. -.....+.++..- .+..+|++|..
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~------ 196 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCD-------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS--RDGALICTSCR------ 196 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETT-------SCEEEEETTTTEEEEEECTTTCCSCEEEEEEC--TTSSCEEEEET------
T ss_pred CeEEEEEECcCCCCEEEEEcCC-------CEEEEEECCCCCccEEEecCCCCCceEEEEEC--CCCCEEEEEec------
Confidence 3667788999874 55554422 359999999998887764 2234455544321 25577777753
Q ss_pred CCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccc
Q 014962 94 IMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETE 173 (415)
Q Consensus 94 ~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 173 (415)
.|.|.+|++..
T Consensus 197 ----------d~~i~iwd~~~----------------------------------------------------------- 207 (402)
T 2aq5_A 197 ----------DKRVRVIEPRK----------------------------------------------------------- 207 (402)
T ss_dssp ----------TSEEEEEETTT-----------------------------------------------------------
T ss_pred ----------CCcEEEEeCCC-----------------------------------------------------------
Confidence 47888888762
Q ss_pred cceEEEEEEEecCCc-eEEEeee-CCceEEEE----eCCeEEEEeeCCCCccceeeee-eeccceEEEEEEEeCCEEEE-
Q 014962 174 TWQLRLAYSTTWPGM-VLAICPY-LDRYFLAS----AGNAFYVCGFPNDNPQRVRRFA-VGRTRFMIMLLTAHFTRIAV- 245 (415)
Q Consensus 174 ~~~L~l~~~~~~~g~-V~al~~~-~g~yLl~~----vg~~l~v~~~~~~~~~~L~~~a-~~~~~~~i~sI~~~~n~IlV- 245 (415)
.+..........+. +.+++-. +|++|+++ ....|.+|++.... ..+.... ..............++++++
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 208 -GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE-EPLSLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp -TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS-SCSEEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred -CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc-CCceEEeccCCCceeEEEEcCCCCEEEEE
Confidence 01111111122333 5555533 46634444 35669999997632 1122211 12223344444556777764
Q ss_pred eecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecC
Q 014962 246 GDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 246 GD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~ 302 (415)
|..-..+.++.++.....+..+..-.....+.++.|..+..++++ .++.+.+++..
T Consensus 286 g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s-~~~~~~~~~l~ 341 (402)
T 2aq5_A 286 GKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN-KCEIARFYKLH 341 (402)
T ss_dssp ETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG-GTEEEEEEEEE
T ss_pred EcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee-cceeEEEEEcC
Confidence 556677888877654432555544445677888888766655444 23466666654
No 84
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.75 E-value=0.086 Score=50.79 Aligned_cols=190 Identities=12% Similarity=0.090 Sum_probs=110.3
Q ss_pred CEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCCCC
Q 014962 19 KKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSG 98 (415)
Q Consensus 19 ~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~ 98 (415)
..+.++|+.+.++.+.. -..|++.|..+++.+..+.-.. ..+.++....-.+..+|+.|..
T Consensus 158 ~~~~~~~~~~~l~t~s~-------D~~v~lwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~g~~l~sgs~----------- 218 (354)
T 2pbi_B 158 SACSFTNSDMQILTASG-------DGTCALWDVESGQLLQSFHGHG-ADVLCLDLAPSETGNTFVSGGC----------- 218 (354)
T ss_dssp EEEEECSSSSEEEEEET-------TSEEEEEETTTCCEEEEEECCS-SCEEEEEECCCSSCCEEEEEET-----------
T ss_pred EEEEEeCCCCEEEEEeC-------CCcEEEEeCCCCeEEEEEcCCC-CCeEEEEEEeCCCCCEEEEEeC-----------
Confidence 34556666555544432 2469999999998887765332 3344443221123367777744
Q ss_pred CccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEE
Q 014962 99 EAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLR 178 (415)
Q Consensus 99 e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~ 178 (415)
-|.|.+|++.. | ..++
T Consensus 219 -----Dg~v~~wd~~~---------------------------------------------------~--------~~~~ 234 (354)
T 2pbi_B 219 -----DKKAMVWDMRS---------------------------------------------------G--------QCVQ 234 (354)
T ss_dssp -----TSCEEEEETTT---------------------------------------------------C--------CEEE
T ss_pred -----CCeEEEEECCC---------------------------------------------------C--------cEEE
Confidence 46788888762 0 0111
Q ss_pred EEEEEecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEE--EEeCCEEEEeecCCcEEE
Q 014962 179 LAYSTTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL--TAHFTRIAVGDCRDGILF 254 (415)
Q Consensus 179 l~~~~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI--~~~~n~IlVGD~~~Sv~l 254 (415)
.+ ..-.++|.+++-. .|.+|+.+ ....|.+|++... +.+...........+.++ ...+.++++|..-..+.+
T Consensus 235 ~~--~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~v 310 (354)
T 2pbi_B 235 AF--ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD--REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV 310 (354)
T ss_dssp EE--CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred Ee--cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC--cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEE
Confidence 11 2345778888754 35534443 3456999999763 223222211111223344 446789999998888876
Q ss_pred EEEEccCC-eEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEE
Q 014962 255 YSYHEDAR-KLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVL 299 (415)
Q Consensus 255 l~y~~~~~-~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl 299 (415)
+.. ..+ .+..+. ....+|+++.|-. ...++.+..+|.+.++
T Consensus 311 wd~--~~~~~~~~l~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 311 WDV--LKGSRVSILF--GHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EET--TTCSEEEEEC--CCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEC--CCCceEEEEE--CCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 543 333 333332 3456788888864 4478888999988775
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.72 E-value=0.22 Score=46.49 Aligned_cols=115 Identities=4% Similarity=-0.036 Sum_probs=73.5
Q ss_pred cCCceEEEeeeC-----CceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEE-eCCEEEEeecCCcEEEEEE
Q 014962 185 WPGMVLAICPYL-----DRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA-HFTRIAVGDCRDGILFYSY 257 (415)
Q Consensus 185 ~~g~V~al~~~~-----g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~-~~n~IlVGD~~~Sv~ll~y 257 (415)
..+.|++++-.. |.+|+++ ..+.|.+|++.. .+.+.....+..+........ .++++++|..-..+.++.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd- 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT--MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWN- 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT--CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEE-
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh--ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE-
Confidence 457888888443 4535544 445699999975 233444332333333333334 568999999888886664
Q ss_pred EccCCeEEEEec--CCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 258 HEDARKLEQIYC--DPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 258 ~~~~~~L~~var--D~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
...++....-. ......++++.+-. ...++.+..+|.|.++....
T Consensus 145 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 145 -IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp -TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred -eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 44444444432 45667888888864 45788889999999998653
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.66 E-value=0.51 Score=46.32 Aligned_cols=167 Identities=9% Similarity=0.011 Sum_probs=101.3
Q ss_pred eeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCc
Q 014962 44 SDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSM 123 (415)
Q Consensus 44 s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~ 123 (415)
..|++.|..+++.+..+.-. ...+.++.. -.+..++++|+. .|.|.+|++..
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~sg~~----------------dg~i~vwd~~~--------- 341 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGH-TDRIYSTIY--DHERKRCISASM----------------DTTIRIWDLEN--------- 341 (464)
T ss_dssp SCEEEEETTTTEEEEEECCC-SSCEEEEEE--ETTTTEEEEEET----------------TSCEEEEETTT---------
T ss_pred CeEEEEECCCCcEEEEecCC-CCCEEEEEE--cCCCCEEEEEeC----------------CCcEEEEECCC---------
Confidence 45999999999888766432 334444432 234578887754 46788888762
Q ss_pred cccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEEEEecCCceEEEeeeCCceEEEE
Q 014962 124 TFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLAS 203 (415)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~~ 203 (415)
| ..+..+ ..-.++|.+++- .+.+|+.+
T Consensus 342 ------------------------------------------~--------~~~~~~--~~h~~~v~~~~~-~~~~l~s~ 368 (464)
T 3v7d_B 342 ------------------------------------------G--------ELMYTL--QGHTALVGLLRL-SDKFLVSA 368 (464)
T ss_dssp ------------------------------------------T--------EEEEEE--CCCSSCEEEEEE-CSSEEEEE
T ss_pred ------------------------------------------C--------cEEEEE--eCCCCcEEEEEE-cCCEEEEE
Confidence 0 011111 234677888774 46646654
Q ss_pred e-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEee
Q 014962 204 A-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282 (415)
Q Consensus 204 v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L 282 (415)
. .+.|.+|++... +.... ........+..+...++++++|. -..+ .-|+...+++...-.-.....+.++.|
T Consensus 369 s~dg~v~vwd~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-dg~i--~iwd~~~g~~~~~~~~~~~~~v~~v~~- 441 (464)
T 3v7d_B 369 AADGSIRGWDANDY--SRKFS-YHHTNLSAITTFYVSDNILVSGS-ENQF--NIYNLRSGKLVHANILKDADQIWSVNF- 441 (464)
T ss_dssp ETTSEEEEEETTTC--CEEEE-EECTTCCCEEEEEECSSEEEEEE-TTEE--EEEETTTCCEEESCTTTTCSEEEEEEE-
T ss_pred eCCCcEEEEECCCC--ceeee-ecCCCCccEEEEEeCCCEEEEec-CCeE--EEEECCCCcEEehhhccCCCcEEEEEe-
Confidence 4 457999999863 22222 22333456777888899999988 4444 556666676665322334667888888
Q ss_pred eCC-eEEEeCCCCcEEE
Q 014962 283 DVD-TAVVSDRKGSIAV 298 (415)
Q Consensus 283 d~d-~~l~aD~~gNl~v 298 (415)
+++ .+++++.+|..++
T Consensus 442 ~~~~l~~~~~~~g~~~i 458 (464)
T 3v7d_B 442 KGKTLVAAVEKDGQSFL 458 (464)
T ss_dssp ETTEEEEEEEETTEEEE
T ss_pred cCCEEEEEEEeCCeEEE
Confidence 455 4455566665443
No 87
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.66 E-value=0.48 Score=45.10 Aligned_cols=251 Identities=10% Similarity=0.030 Sum_probs=137.6
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCC-eEEEEEEEEEC-CeeEEEEeeecCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE-TGKSMELVRVG-HEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E-~~~si~~~~l~-~~~~lvVGT~~~~~~~~ 94 (415)
..+.++++|+.+.++.+..+. .+++.|..+.+......|..++ .+.+ +.+. +..+|+.|..
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~-------~v~iw~~~~~~~~~~~~~~~h~~~v~~---v~~sp~~~~l~s~s~------- 125 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDA-------TTCIWKKNQDDFECVTTLEGHENEVKS---VAWAPSGNLLATCSR------- 125 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTS-------CEEEEEECCC-EEEEEEECCCSSCEEE---EEECTTSSEEEEEET-------
T ss_pred cEEEEEECCCCCEEEEEECCC-------cEEEEEccCCCeEEEEEccCCCCCceE---EEEeCCCCEEEEEEC-------
Confidence 567889999988877665332 4777776555432223344332 3443 3443 4578887744
Q ss_pred CCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccccccc
Q 014962 95 MPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETET 174 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 174 (415)
-|.|.+|++...
T Consensus 126 ---------D~~v~iwd~~~~----------------------------------------------------------- 137 (345)
T 3fm0_A 126 ---------DKSVWVWEVDEE----------------------------------------------------------- 137 (345)
T ss_dssp ---------TSCEEEEEECTT-----------------------------------------------------------
T ss_pred ---------CCeEEEEECCCC-----------------------------------------------------------
Confidence 467889988720
Q ss_pred ceEEEEEE-EecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCc
Q 014962 175 WQLRLAYS-TTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDG 251 (415)
Q Consensus 175 ~~L~l~~~-~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~S 251 (415)
...+.+.. ....+.|.+++-- .|.+|+.+. ...|.+|+........+.....+......+.....+++++.|..-..
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 01222221 2345678887743 355455443 45689999875211111121222223333344456789999999999
Q ss_pred EEEEEEEccCC-------------eEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCCCcCCCCCCCCccce
Q 014962 252 ILFYSYHEDAR-------------KLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP 317 (415)
Q Consensus 252 v~ll~y~~~~~-------------~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~~~~~~~~~~~kL~~ 317 (415)
|.++....... +............+.++.+-. ...++.+..++.+.++........ .. ..+..
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~-~~--~~~~~ 294 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDP-QQ--PTFSL 294 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCT-TS--CCEEE
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCc-ce--eeEEE
Confidence 98886532211 122222334566788888754 347888888999999986542110 11 12222
Q ss_pred eeeeec--CccccEEEeeceeccCCCCCccccccccCCCCCceEEEEeCCcceEEEEec
Q 014962 318 NCAYHM--GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPI 374 (415)
Q Consensus 318 ~~~fhl--Gd~Vt~~~~gsl~~~~~~~~~~~~~~~~~~~~~~~ily~T~~GsIG~l~pl 374 (415)
..+.+- .+.|+++... | .....++-|+.+|.|-+--.-
T Consensus 295 ~~~~~~~h~~~V~~v~~~------p-------------~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 295 TAHLHQAHSQDVNCVAWN------P-------------KEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp EEEETTSSSSCEEEEEEC------S-------------SSTTEEEEEETTSCEEEEEEC
T ss_pred EeeecccccCcEeEeEEe------C-------------CCceEEEEcCCCCcEEEEEec
Confidence 223222 3456665321 1 122357778889998766544
No 88
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.62 E-value=0.59 Score=45.67 Aligned_cols=178 Identities=12% Similarity=0.087 Sum_probs=106.8
Q ss_pred eeEEEEeCCCCcEEEEEeCCCC-CeEEEEEEEEECCeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCC
Q 014962 44 SDICCVDPLSGSVLSSFKLELG-ETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGS 122 (415)
Q Consensus 44 s~i~l~d~~t~~~i~s~~l~~~-E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~ 122 (415)
.+|+|-|..|++++..+++..+ ..|+|++.- .+..+|++|+. -|.|.+|++..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fs--pdg~~lasgs~----------------Dg~v~iWd~~~-------- 178 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWI--KEGNYLAVGTS----------------SAEVQLWDVQQ-------- 178 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEEC--TTSSEEEEEET----------------TSCEEEEETTT--------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEEC--CCCCEEEEEEC----------------CCeEEEEEcCC--------
Confidence 4699999999999998888754 566665431 35589999966 46788888762
Q ss_pred ccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEEEEecCCceEEEeeeCCceEEE
Q 014962 123 MTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLA 202 (415)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~ 202 (415)
+..+... ....+.|.++. +++.+|+.
T Consensus 179 ---------------------------------------------------~~~~~~~--~~h~~~v~~~s-~~~~~l~s 204 (420)
T 4gga_A 179 ---------------------------------------------------QKRLRNM--TSHSARVGSLS-WNSYILSS 204 (420)
T ss_dssp ---------------------------------------------------TEEEEEE--CCCSSCEEEEE-EETTEEEE
T ss_pred ---------------------------------------------------CcEEEEE--eCCCCceEEEe-eCCCEEEE
Confidence 0122211 23456677776 45763444
Q ss_pred Ee-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeE-EEEecCCCcceeEEEE
Q 014962 203 SA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKL-EQIYCDPSQRLVADCV 280 (415)
Q Consensus 203 ~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L-~~varD~~~~~vta~~ 280 (415)
+. ...+.+|++.... ..+.....+............+++++.|..-..+.++......... ...........|.++.
T Consensus 205 gs~d~~i~~~d~~~~~-~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~ 283 (420)
T 4gga_A 205 GSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA 283 (420)
T ss_dssp EETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEE
T ss_pred EeCCCceeEeeecccc-eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeee
Confidence 33 3447778776532 2233333344444555555677888888888888776554332211 1112233445677777
Q ss_pred eeeCC-eEE---EeCCCCcEEEEecC
Q 014962 281 LMDVD-TAV---VSDRKGSIAVLSCS 302 (415)
Q Consensus 281 ~Ld~d-~~l---~aD~~gNl~vl~~~ 302 (415)
+...+ .++ ++..++.|.++...
T Consensus 284 ~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 284 WCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp ECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred eCCCcccEEEEEeecCCCEEEEEeCC
Confidence 76433 332 34678899888754
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.62 E-value=0.069 Score=50.90 Aligned_cols=172 Identities=12% Similarity=0.025 Sum_probs=87.6
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc---EEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS---VLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSG 91 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~---~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~ 91 (415)
.....++++|+.+.++.+..+ ..|++.|..+.+ .+..+.-.....+.++. +. +..+|+.|..
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~---~~~~~~~l~~~~~---- 166 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGA-------RVISVCYFEQENDWWVSKHLKRPLRSTILSLD---WHPNNVLLAAGCA---- 166 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESS-------SCEEECCC-----CCCCEEECSSCCSCEEEEE---ECTTSSEEEEEES----
T ss_pred CceEEEEECCCCCEEEEEecC-------CeEEEEEECCcccceeeeEeecccCCCeEEEE---EcCCCCEEEEEeC----
Confidence 356677888887777666533 348888876655 34444432344555443 33 4578888754
Q ss_pred CCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccc
Q 014962 92 PAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEE 171 (415)
Q Consensus 92 ~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 171 (415)
.|.|.+|++..... +. ...+. ..|.++
T Consensus 167 ------------d~~i~iwd~~~~~~-~~-----------------------------------~~~~~---~~~~~~-- 193 (377)
T 3dwl_C 167 ------------DRKAYVLSAYVRDV-DA-----------------------------------KPEAS---VWGSRL-- 193 (377)
T ss_dssp ------------SSCEEEEEECCSSC-C------------------------------------CCCSC---SSCSCC--
T ss_pred ------------CCEEEEEEEEeccc-CC-----------------------------------Ccccc---cccccc--
Confidence 46799999873100 00 00000 011110
Q ss_pred cccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCc--cceeeeeeeccceEEEEEEEeCCEEEEee
Q 014962 172 TETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNP--QRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247 (415)
Q Consensus 172 ~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~--~~L~~~a~~~~~~~i~sI~~~~n~IlVGD 247 (415)
..-+++......++|++++-- .|++|+.+. .+.|++|++..... ..+.....+..+.........+.+|+.|.
T Consensus 194 ---~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 194 ---PFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp ---CEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred ---chhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 122333333667889998843 466465553 45799999986321 00333333333444444445566666664
Q ss_pred cCCcEEEEEEE
Q 014962 248 CRDGILFYSYH 258 (415)
Q Consensus 248 ~~~Sv~ll~y~ 258 (415)
..++.++...
T Consensus 271 -~~~~~~~~~~ 280 (377)
T 3dwl_C 271 -NYSPILLQGN 280 (377)
T ss_dssp -SSSEEEECCC
T ss_pred -CCcEEEEEeC
Confidence 5555555443
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.61 E-value=0.017 Score=57.26 Aligned_cols=200 Identities=12% Similarity=0.088 Sum_probs=113.5
Q ss_pred eCCCccCEEEEecC-CCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCC-CeEEEEEEEEEC--CeeEEEEeeec
Q 014962 13 HLGGTPKKVLYHSE-SRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELG-ETGKSMELVRVG--HEQVLVVGTSL 88 (415)
Q Consensus 13 ~L~~tp~~I~y~~~-~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~-E~~~si~~~~l~--~~~~lvVGT~~ 88 (415)
+-......|++||. .++++++..+ ..|+|.|..+.+....+.+..+ ..|+|+ .|. +..+|+.|..
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~d-------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l---~f~p~~~~~l~s~s~- 185 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKG-------GDIMLWNFGIKDKPTFIKGIGAGGSITGL---KFNPLNTNQFYASSM- 185 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETT-------SCEEEECSSCCSCCEEECCCSSSCCCCEE---EECSSCTTEEEEECS-
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCC-------CEEEEEECCCCCceeEEEccCCCCCEEEE---EEeCCCCCEEEEEeC-
Confidence 33445678999996 4566655433 3599999887765555555543 344444 443 3467776532
Q ss_pred CCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcc
Q 014962 89 SSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIK 168 (415)
Q Consensus 89 ~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 168 (415)
-|.|.+|++..
T Consensus 186 ---------------D~~v~iwd~~~------------------------------------------------------ 196 (435)
T 4e54_B 186 ---------------EGTTRLQDFKG------------------------------------------------------ 196 (435)
T ss_dssp ---------------SSCEEEEETTS------------------------------------------------------
T ss_pred ---------------CCEEEEeeccC------------------------------------------------------
Confidence 35677777651
Q ss_pred ccccccceEEEEE-EEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--eCC-E
Q 014962 169 LEETETWQLRLAY-STTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--HFT-R 242 (415)
Q Consensus 169 ~~~~~~~~L~l~~-~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~~n-~ 242 (415)
..++.+. .......+.+++-- .|++|++|- ...|++|++.. +.+.....+.. .|.+|.. .++ +
T Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~---~~~~~~~~h~~--~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 197 ------NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG---KELWNLRMHKK--KVTHVALNPCCDWF 265 (435)
T ss_dssp ------CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS---CBCCCSBCCSS--CEEEEEECTTCSSE
T ss_pred ------CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc---ceeEEEecccc--eEEeeeecCCCceE
Confidence 0222222 12234445555532 466344432 34599999864 33433333333 3455543 444 6
Q ss_pred EEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEee-eCCeEEEeCCCCcEEEEecCC
Q 014962 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 243 IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~~~ 303 (415)
++.|..-..|.++..+.............+...|+++.|- |...++.+..+|.|.++....
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 6677777777666544332222223333456678888875 345788889999999998643
No 91
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.60 E-value=0.28 Score=45.58 Aligned_cols=96 Identities=15% Similarity=0.110 Sum_probs=59.5
Q ss_pred eEEEEeCCC--ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCC--CeEEEEEEEEEC-CeeEE
Q 014962 8 NVRKFHLGG--TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELG--ETGKSMELVRVG-HEQVL 82 (415)
Q Consensus 8 ~i~~i~L~~--tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~--E~~~si~~~~l~-~~~~l 82 (415)
.++.++++. .|+.++++|+.+.+++... ....|.++|..+++.+..+.+... +....+..+.+. +..++
T Consensus 33 ~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 106 (349)
T 1jmx_B 33 VYKSCVMPDKFGPGTAMMAPDNRTAYVLNN------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEV 106 (349)
T ss_dssp EEEEEECSSCCSSCEEEECTTSSEEEEEET------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEE
T ss_pred EEEEEecCCCCCCceeEECCCCCEEEEEeC------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEE
Confidence 456788887 8999999999986666642 224699999999998888877542 112222333443 44677
Q ss_pred EEeeecCCCCCCCCCCCccccccEEEEEEEE
Q 014962 83 VVGTSLSSGPAIMPSGEAESTKGRLIVLCIE 113 (415)
Q Consensus 83 vVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~ 113 (415)
+++..... .+..+.....++|.+|++.
T Consensus 107 ~~~~~~~~----~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 107 YATVNPTQ----RLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp EEEEEEEE----ECSSCEEECCCEEEEEEGG
T ss_pred EEEccccc----ccccccccCCCeEEEEECC
Confidence 77764211 0011111224788888876
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.58 E-value=0.12 Score=50.20 Aligned_cols=137 Identities=9% Similarity=-0.030 Sum_probs=73.0
Q ss_pred cCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccc--eEEEEEEEeCCEEEEe---ecCCcEEEEEE
Q 014962 185 WPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTR--FMIMLLTAHFTRIAVG---DCRDGILFYSY 257 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~--~~i~sI~~~~n~IlVG---D~~~Sv~ll~y 257 (415)
..++|++++-- .|.+|+++ -.+.|++|++... +.+......... .........+.++++| ..-..+.++..
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG--TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC--ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 46778888744 46645554 3567999999862 333332111111 2222333455677777 44555555443
Q ss_pred EccCCeEEEEecCCCcceeEEEEeeeCC-eE-EEeCCCCcEEEEecCCCcCCCCCCCCccceeeeeecCccccEEE
Q 014962 258 HEDARKLEQIYCDPSQRLVADCVLMDVD-TA-VVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIR 331 (415)
Q Consensus 258 ~~~~~~L~~varD~~~~~vta~~~Ld~d-~~-l~aD~~gNl~vl~~~~~~~~~~~~~~kL~~~~~fhlGd~Vt~~~ 331 (415)
+.....+....-+ ....+.++.+-.++ .+ +++..+|.|.+++.... ...+.....+..+..|+++.
T Consensus 253 ~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~-------~~~~~~l~~~~~~~~v~~~~ 320 (402)
T 2aq5_A 253 KHLEEPLSLQELD-TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE-------APFLHYLSMFSSKESQRGMG 320 (402)
T ss_dssp TBCSSCSEEEECC-CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS-------TTCEEEEEEECCSSCCSEEE
T ss_pred ccccCCceEEecc-CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC-------CcceEeecccccCCcccceE
Confidence 3222212222222 33457777765443 44 45677999999997541 11244555555566777775
No 93
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.57 E-value=0.29 Score=45.28 Aligned_cols=93 Identities=8% Similarity=-0.015 Sum_probs=56.7
Q ss_pred CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC
Q 014962 205 GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284 (415)
Q Consensus 205 g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~ 284 (415)
...|.+|++.. .+.+.....+..+...+.+...+++++.|..-..+.++ +....+....-. ....+.++.+..+
T Consensus 194 d~~i~i~d~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw--d~~~~~~~~~~~--~~~~v~~~~~~~~ 267 (340)
T 4aow_A 194 DKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW--DLNEGKHLYTLD--GGDIINALCFSPN 267 (340)
T ss_dssp TSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEE--ETTTTEEEEEEE--CSSCEEEEEECSS
T ss_pred CCEEEEEECCC--CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEE--EeccCceeeeec--CCceEEeeecCCC
Confidence 35689999976 23333323233333334444467899999888877665 443333322222 2346777878777
Q ss_pred CeEEEeCCCCcEEEEecCC
Q 014962 285 DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 285 d~~l~aD~~gNl~vl~~~~ 303 (415)
+.++++-.++.|.++....
T Consensus 268 ~~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 268 RYWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp SSEEEEEETTEEEEEETTT
T ss_pred CceeeccCCCEEEEEECCC
Confidence 7777777789999887543
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.061 Score=57.79 Aligned_cols=119 Identities=6% Similarity=-0.034 Sum_probs=72.9
Q ss_pred EecCCceEEEeeeC--------------CceEEEEe-CCeEEEEeeCCCCc--cceeeeeeeccceEEEEEE--Ee---C
Q 014962 183 TTWPGMVLAICPYL--------------DRYFLASA-GNAFYVCGFPNDNP--QRVRRFAVGRTRFMIMLLT--AH---F 240 (415)
Q Consensus 183 ~~~~g~V~al~~~~--------------g~yLl~~v-g~~l~v~~~~~~~~--~~L~~~a~~~~~~~i~sI~--~~---~ 240 (415)
....++|.+++-.. |.+|+++. .+.|++|++..... ..+.....+.. .|.++. .. +
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~--~V~~l~~sp~~~~~ 219 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLR 219 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSS
T ss_pred ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC--cEEEEEeccCCCCC
Confidence 34567788877443 55455554 45699999975321 11111112222 455555 44 6
Q ss_pred CEEEEeecCCcEEEEEEEccCCe--EEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 241 TRIAVGDCRDGILFYSYHEDARK--LEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 241 n~IlVGD~~~Sv~ll~y~~~~~~--L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
++++.|+.-..+.++..+..... ............++++.+-. ...++++..+|.|.+++...
T Consensus 220 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 220 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 78999999889988877654321 12222333556778888753 44788889999999998763
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.2 Score=47.50 Aligned_cols=177 Identities=9% Similarity=0.019 Sum_probs=91.2
Q ss_pred EEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccc
Q 014962 46 ICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTF 125 (415)
Q Consensus 46 i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~ 125 (415)
+.+.|..+.+++..+++...+.+.++..-...+..+++.|.. .|.|.+|++..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~----------------dg~i~~wd~~~----------- 158 (343)
T 3lrv_A 106 ITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADN----------------RGTIGFQSYED----------- 158 (343)
T ss_dssp EEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEET----------------TCCEEEEESSS-----------
T ss_pred eEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC----------------CCcEEEEECCC-----------
Confidence 444566677777777777666676655432114467777754 46788888772
Q ss_pred cccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEEEEEEecCCceEEEeee-CCceEEE-E
Q 014962 126 CSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLA-S 203 (415)
Q Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~-~ 203 (415)
.+...+.......+|.+++-- .|.+|++ +
T Consensus 159 -------------------------------------------------~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 159 -------------------------------------------------DSQYIVHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp -------------------------------------------------SCEEEEECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred -------------------------------------------------CcEEEEEecCCCCceEEEEECCCCCEEEEEc
Confidence 012222223345567777743 4563443 3
Q ss_pred eCCeEEEEeeCCCCccce-eeeee-eccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeE----EEEecCCCcceeE
Q 014962 204 AGNAFYVCGFPNDNPQRV-RRFAV-GRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKL----EQIYCDPSQRLVA 277 (415)
Q Consensus 204 vg~~l~v~~~~~~~~~~L-~~~a~-~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L----~~varD~~~~~vt 277 (415)
..+.|.+|++... +.+ ..... +..+...+.....+.+++.|. -..+.+ |+....+. ..+..+..+....
T Consensus 190 ~dg~i~iwd~~~~--~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~i--wd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 190 PDGILDVYNLSSP--DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVC--FDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp TTSCEEEEESSCT--TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEE--EETTSSTTCBSSCCCBC-----CCE
T ss_pred CCCEEEEEECCCC--CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEE--EEcCCCCcceeecccccccccccce
Confidence 4567999999863 223 23222 333333444444677888888 345544 44433221 1100010111112
Q ss_pred EEEeeeCC-eEEEeCC-CCcEEEEecCC
Q 014962 278 DCVLMDVD-TAVVSDR-KGSIAVLSCSD 303 (415)
Q Consensus 278 a~~~Ld~d-~~l~aD~-~gNl~vl~~~~ 303 (415)
++.|-.++ .++++.. ++.+.++++..
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 45553333 4444344 77888888754
No 96
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.35 E-value=0.18 Score=49.82 Aligned_cols=210 Identities=11% Similarity=0.103 Sum_probs=120.7
Q ss_pred EEEEeCCCccCEEEEecCC-CEEEEEEEeeCCCcceeeEEEEeCCC----------CcEEEEEeCCCCCeEEEEEEEEEC
Q 014962 9 VRKFHLGGTPKKVLYHSES-RLLIVMRTELNNDTCSSDICCVDPLS----------GSVLSSFKLELGETGKSMELVRVG 77 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~-~~~~v~~~~~~~~~~~s~i~l~d~~t----------~~~i~s~~l~~~E~~~si~~~~l~ 77 (415)
.+.++-...+.+|+++|.. +++++++ . .+.|+++|..+ ...+..+.-... .+.++ .+.
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~-~------dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l---~~~ 190 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKT-P------SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-EGYGL---SWN 190 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEEC-S------SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-CCCCE---EEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEEC-C------CCcEEEEECCCcccccCccccCCCcEEecCCCC-CeEEE---EeC
Confidence 5667778899999999974 4444443 2 23588888654 344444443222 23333 332
Q ss_pred -Cee-EEEEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcC
Q 014962 78 -HEQ-VLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSL 155 (415)
Q Consensus 78 -~~~-~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 155 (415)
+.. +|+.|.. .|.|.+|++...
T Consensus 191 ~~~~~~l~s~~~----------------dg~i~vwd~~~~---------------------------------------- 214 (430)
T 2xyi_A 191 PNLNGYLLSASD----------------DHTICLWDINAT---------------------------------------- 214 (430)
T ss_dssp TTSTTEEEEECT----------------TSCEEEEETTSC----------------------------------------
T ss_pred CCCCCeEEEEeC----------------CCeEEEEeCCCC----------------------------------------
Confidence 233 7777733 578999988730
Q ss_pred CCCCCCCCCCCccccccccceEEEEEE-EecCCceEEEeee--CCceEEEE--eCCeEEEEeeCCCC-ccceeeeeeecc
Q 014962 156 CSSPDDASCDGIKLEETETWQLRLAYS-TTWPGMVLAICPY--LDRYFLAS--AGNAFYVCGFPNDN-PQRVRRFAVGRT 229 (415)
Q Consensus 156 ~~~~~~~~~~g~~~~~~~~~~L~l~~~-~~~~g~V~al~~~--~g~yLl~~--vg~~l~v~~~~~~~-~~~L~~~a~~~~ 229 (415)
.. ....+..... ....+.|.+++-. .+. ++++ ....|++|++.... .+.+.....+..
T Consensus 215 ---~~------------~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 215 ---PK------------EHRVIDAKNIFTGHTAVVEDVAWHLLHES-LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp ---CB------------GGGEEECSEEECCCSSCEEEEEECSSCTT-EEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred ---CC------------CCceeccceeecCCCCCEeeeEEeCCCCC-EEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 00 0011211111 2346778888754 355 4443 35679999998632 122333223333
Q ss_pred ceEEEEEEEeCC-EEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCC--eEEEeCCCCcEEEEecCC
Q 014962 230 RFMIMLLTAHFT-RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD--TAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 230 ~~~i~sI~~~~n-~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d--~~l~aD~~gNl~vl~~~~ 303 (415)
..........+. ++++|..-..|.++.++.....+..+.. ....++++.+-.++ .++.+..+|.|.++.+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 333333334454 6778888888877776543333444332 45678888886544 477788899999998754
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.34 E-value=0.03 Score=53.50 Aligned_cols=199 Identities=11% Similarity=0.068 Sum_probs=111.9
Q ss_pred CCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCC--cEEEEEeCCC-CCeEEEEEEEEEC-CeeEEEEeeecCC
Q 014962 15 GGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSG--SVLSSFKLEL-GETGKSMELVRVG-HEQVLVVGTSLSS 90 (415)
Q Consensus 15 ~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~--~~i~s~~l~~-~E~~~si~~~~l~-~~~~lvVGT~~~~ 90 (415)
......++++|+.+.++.+..+ ..|++.|..+. +.+.. |.. ...+.++ .+. +..+|+.|..
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d-------~~i~iw~~~~~~~~~~~~--~~~h~~~v~~~---~~s~~~~~l~s~s~--- 75 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTAT-------NQVELYEQDGNGWKHART--FSDHDKIVTCV---DWAPKSNRIVTCSQ--- 75 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSS-------SCBCEEEEETTEEEECCC--BCCCSSCEEEE---EECTTTCCEEEEET---
T ss_pred CCcEEEEEECCCCCEEEEecCC-------CEEEEEEccCCceEEEEE--EecCCceEEEE---EEeCCCCEEEEEeC---
Confidence 3467889999998877665432 35788887776 44333 333 2344443 443 4467777753
Q ss_pred CCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCcccc
Q 014962 91 GPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLE 170 (415)
Q Consensus 91 ~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 170 (415)
.|.|.+|++... .
T Consensus 76 -------------d~~v~vwd~~~~---------------------------------------------------~--- 88 (377)
T 3dwl_C 76 -------------DRNAYVYEKRPD---------------------------------------------------G--- 88 (377)
T ss_dssp -------------TSSEEEC------------------------------------------------------------
T ss_pred -------------CCeEEEEEcCCC---------------------------------------------------C---
Confidence 467888888830 0
Q ss_pred ccccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCcc-ceeeeee-eccceEEEEEE--EeCCEEE
Q 014962 171 ETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQ-RVRRFAV-GRTRFMIMLLT--AHFTRIA 244 (415)
Q Consensus 171 ~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~-~L~~~a~-~~~~~~i~sI~--~~~n~Il 244 (415)
.++.. .......++|++++-- +|++|+++. ...|.+|++...... .++.... +.. .+.+|. ..+++++
T Consensus 89 ---~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 89 ---TWKQT-LVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS--TILSLDWHPNNVLLA 162 (377)
T ss_dssp ---CCCCE-EECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS--CEEEEEECTTSSEEE
T ss_pred ---ceeee-eEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC--CeEEEEEcCCCCEEE
Confidence 00000 1112356788888743 455455543 456999999863210 1222221 222 455554 4567999
Q ss_pred EeecCCcEEEEEEEccC----------------CeEEEEecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecCC
Q 014962 245 VGDCRDGILFYSYHEDA----------------RKLEQIYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 245 VGD~~~Sv~ll~y~~~~----------------~~L~~varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~~ 303 (415)
.|..-..+.++..+... +++...- ....+++++.|-.+ ..++.+..+|.|.++....
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 99988889888764211 2222221 45667888888644 4788889999999888654
No 98
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.13 Score=56.81 Aligned_cols=195 Identities=15% Similarity=0.156 Sum_probs=117.3
Q ss_pred EeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCC
Q 014962 12 FHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSG 91 (415)
Q Consensus 12 i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~ 91 (415)
.........++|+|+.++++++..+ ..|+|.|..+.+.+.. +.....|.++.... + .+|+.|..
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~D-------g~I~lw~~~~~~~~~~--~~~~~~V~~l~fsp--g-~~L~S~s~---- 77 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVT-------GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVK--G-IYLVVINA---- 77 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETT-------SEEEEECSTTCEEEEE--CSSCCCEEEEEEET--T-TEEEEEET----
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCC-------CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcC--C-CEEEEEEC----
Confidence 3345678899999999998887644 3699999887776543 44455666665443 3 47776643
Q ss_pred CCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccc
Q 014962 92 PAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEE 171 (415)
Q Consensus 92 ~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 171 (415)
.|.|.+|++.. |
T Consensus 78 ------------D~~v~lWd~~~---------------------------------------------------~----- 89 (902)
T 2oaj_A 78 ------------KDTVYVLSLYS---------------------------------------------------Q----- 89 (902)
T ss_dssp ------------TCEEEEEETTT---------------------------------------------------C-----
T ss_pred ------------cCeEEEEECCC---------------------------------------------------C-----
Confidence 46788888762 0
Q ss_pred cccceEEEEEEEecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeee----------eccceEEEEEEEe
Q 014962 172 TETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAV----------GRTRFMIMLLTAH 239 (415)
Q Consensus 172 ~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~----------~~~~~~i~sI~~~ 239 (415)
..+ +.....+.|++++-- .|.+|++|. ...|.+|++... + +..... ....-.|.+|.-.
T Consensus 90 ---~~~---~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~--~-~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 90 ---KVL---TTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD--Q-LSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp ---SEE---EEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT--E-EEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred ---cEE---EEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC--c-cccceeccccccccccccCCCCeEEEEEc
Confidence 011 222356789988843 456566654 456999999752 2 211110 0011134555543
Q ss_pred ---CCEEEEeecCCcEEEEEEEccCCeEEEEecCC-----------------CcceeEEEEeee-CCeEEEeCCCCcEEE
Q 014962 240 ---FTRIAVGDCRDGILFYSYHEDARKLEQIYCDP-----------------SQRLVADCVLMD-VDTAVVSDRKGSIAV 298 (415)
Q Consensus 240 ---~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~-----------------~~~~vta~~~Ld-~d~~l~aD~~gNl~v 298 (415)
++.+++|..-..+ + |+...++....-... ...+|+++.|-. ...++.+..+|.|.+
T Consensus 161 p~~~~~l~~g~~dg~v-l--Wd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 161 PRDIGTVLISYEYVTL-T--YSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp TTEEEEEEEECSSCEE-E--EETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred cCCCCEEEEEeCCCcE-E--EECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 2467777655444 4 455454433222211 125688888864 447888899999999
Q ss_pred EecC
Q 014962 299 LSCS 302 (415)
Q Consensus 299 l~~~ 302 (415)
++..
T Consensus 238 Wd~~ 241 (902)
T 2oaj_A 238 WDAN 241 (902)
T ss_dssp EETT
T ss_pred EECC
Confidence 9864
No 99
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.33 E-value=0.68 Score=43.09 Aligned_cols=114 Identities=11% Similarity=0.095 Sum_probs=72.9
Q ss_pred cCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCC
Q 014962 185 WPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDAR 262 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~ 262 (415)
..++|.+++-. .|++|++|. ...|.+|++... +.+.....+......+.+...+++++.|..-..+.++.++.. .
T Consensus 54 ~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~ 130 (304)
T 2ynn_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN-W 130 (304)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT-T
T ss_pred cCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC--cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC-c
Confidence 46778887744 355455443 456999999762 334443333333444444556789999999899977655432 2
Q ss_pred eEEEEecCCCcceeEEEEeee--CCeEEEeCCCCcEEEEecC
Q 014962 263 KLEQIYCDPSQRLVADCVLMD--VDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 263 ~L~~varD~~~~~vta~~~Ld--~d~~l~aD~~gNl~vl~~~ 302 (415)
.+...- ......|+++.|-. ...++.+..+|.+.++...
T Consensus 131 ~~~~~~-~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 131 ALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp EEEEEE-CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred chhhhh-cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 333222 33556788888863 3578888999999999864
No 100
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.29 E-value=0.68 Score=42.72 Aligned_cols=229 Identities=12% Similarity=0.076 Sum_probs=121.6
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCC--CCc--EEEEEeCCCCCeEEEEEEEEEC-CeeEE
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPL--SGS--VLSSFKLELGETGKSMELVRVG-HEQVL 82 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~--t~~--~i~s~~l~~~E~~~si~~~~l~-~~~~l 82 (415)
.+..++....|..++++|+.+.++++..+ ...|++++.. +++ .+..+.... .+. .+.+. +..++
T Consensus 30 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~s~dg~~l 98 (343)
T 1ri6_A 30 LTQVVDVPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAESALPG--SLT---HISTDHQGQFV 98 (343)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEECSS--CCS---EEEECTTSSEE
T ss_pred EeeeEecCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeeccccccCC--CCc---EEEEcCCCCEE
Confidence 45667888899999999999977776532 1457775543 544 445554432 333 23343 44566
Q ss_pred EEeeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCC
Q 014962 83 VVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDA 162 (415)
Q Consensus 83 vVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 162 (415)
+++.. ..|.|.+|++..
T Consensus 99 ~~~~~---------------~~~~i~~~d~~~------------------------------------------------ 115 (343)
T 1ri6_A 99 FVGSY---------------NAGNVSVTRLED------------------------------------------------ 115 (343)
T ss_dssp EEEET---------------TTTEEEEEEEET------------------------------------------------
T ss_pred EEEec---------------CCCeEEEEECCC------------------------------------------------
Confidence 55532 147899998851
Q ss_pred CCCCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeee----eecc--ceEE
Q 014962 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFA----VGRT--RFMI 233 (415)
Q Consensus 163 ~~~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a----~~~~--~~~i 233 (415)
| ...+.+........+.+++-- .|++|+++. .+.|.+|++..+. .+.... .... ....
T Consensus 116 ---~--------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~ 182 (343)
T 1ri6_A 116 ---G--------LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG--HLVAQDPAEVTTVEGAGPRH 182 (343)
T ss_dssp ---T--------EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS--CEEEEEEEEEECSTTCCEEE
T ss_pred ---C--------ccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC--ceeeecccccccCCCCCcce
Confidence 0 012223223333445555422 355466653 5779999997532 232111 1111 2223
Q ss_pred EEEEEeCCEEEEeecC-CcEEEEEEEccCCeEE---EEec---C-CCcceeEEEEeeeCC-eEEEeC-CCCcEEEEecCC
Q 014962 234 MLLTAHFTRIAVGDCR-DGILFYSYHEDARKLE---QIYC---D-PSQRLVADCVLMDVD-TAVVSD-RKGSIAVLSCSD 303 (415)
Q Consensus 234 ~sI~~~~n~IlVGD~~-~Sv~ll~y~~~~~~L~---~var---D-~~~~~vta~~~Ld~d-~~l~aD-~~gNl~vl~~~~ 303 (415)
..+...++++++++.. ..+.++.++...+.+. .+.. . ....++.++.+-.++ .+++++ .++.|.+++...
T Consensus 183 ~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 183 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 3444567788888744 4566666544334332 2221 1 113456666664333 455454 578899888753
Q ss_pred CcCCCCCCCCccceeeeeecCccccEE
Q 014962 304 RLEDNASPECNLTPNCAYHMGEIAVSI 330 (415)
Q Consensus 304 ~~~~~~~~~~kL~~~~~fhlGd~Vt~~ 330 (415)
. . ..+.....+..+..+..+
T Consensus 263 ~-----~--~~~~~~~~~~~~~~~~~~ 282 (343)
T 1ri6_A 263 D-----G--SVLSKEGFQPTETQPRGF 282 (343)
T ss_dssp T-----S--CCEEEEEEEECSSSCCCE
T ss_pred C-----C--CceEEeeeecCCCccceE
Confidence 1 1 134444445444445444
No 101
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.047 Score=52.55 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=65.7
Q ss_pred cCCceEEEeeeC--CceEEEE--eCCeEEEEeeCCCCccceeeeeeecc----ceEEEEEEE--eC-CEEEEeecCC---
Q 014962 185 WPGMVLAICPYL--DRYFLAS--AGNAFYVCGFPNDNPQRVRRFAVGRT----RFMIMLLTA--HF-TRIAVGDCRD--- 250 (415)
Q Consensus 185 ~~g~V~al~~~~--g~yLl~~--vg~~l~v~~~~~~~~~~L~~~a~~~~----~~~i~sI~~--~~-n~IlVGD~~~--- 250 (415)
..++|.+++-.. +. ++++ ....|.+|++... +.+........ ...+.++.. .+ .++++|..-.
T Consensus 164 ~~~~v~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAH-VFASAGSSNFASIWDLKAK--KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SSCCCCEEEECSSCTT-EEEEESSSSCEEEEETTTT--EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred CCCCeeEEEeCCCCCc-EEEEEcCCCCEEEEECCCC--CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 456777777443 45 4443 3456999999862 33333222200 223555554 44 4777777665
Q ss_pred cEEEEEEEccCCeEEEEecCCCcceeEEEEee--eCCeEEEeCCCCcEEEEecC
Q 014962 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLM--DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 251 Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L--d~d~~l~aD~~gNl~vl~~~ 302 (415)
.+.++..+.....+..+ .......++++.+- +...++.+..+|.|.++...
T Consensus 241 ~i~~~d~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTL-NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp CCCEEETTSTTSCSBCC-CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred eEEEEeCCCCCCCcEEe-ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence 77666544322222222 11345678888885 44578888999999999854
No 102
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.20 E-value=0.7 Score=43.93 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=58.4
Q ss_pred eEEEeeeCCceEEEEe---CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecCC---------cEEEE
Q 014962 189 VLAICPYLDRYFLASA---GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCRD---------GILFY 255 (415)
Q Consensus 189 V~al~~~~g~yLl~~v---g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~~---------Sv~ll 255 (415)
+..|+--.++ |.++. ++.|.++++... +.+....... .+..|... .+.+++++.-. +-.++
T Consensus 133 p~~i~~~~~~-lyv~~~~~~~~v~viD~~t~--~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 133 TEQMVQYGKY-VYVNCWSYQNRILKIDTETD--KVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp CCCEEEETTE-EEEEECTTCCEEEEEETTTT--EEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred cceEEEECCE-EEEEcCCCCCEEEEEECCCC--eEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 3444444455 77763 678999998752 3333322222 22333332 35678877654 35678
Q ss_pred EEEccCCeEEEEecCCCcceeEEEEee-eCCeEEEeCCCCcEEEEec
Q 014962 256 SYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 256 ~y~~~~~~L~~varD~~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~ 301 (415)
.++...+++...-.=....+...+.+- |.+.+.+++. .++++..
T Consensus 207 ~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~ 251 (328)
T 3dsm_A 207 RIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPV 251 (328)
T ss_dssp EEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEET
T ss_pred EEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEEC
Confidence 889887776533221111244555553 3557778886 7776664
No 103
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.071 Score=51.28 Aligned_cols=112 Identities=8% Similarity=0.067 Sum_probs=68.7
Q ss_pred CCceEEEeeeC-C-ceEEEEeCC----eEEEEeeCCCCccceeeee-eeccceEEEEEEE---eCCEEEEeecCCcEEEE
Q 014962 186 PGMVLAICPYL-D-RYFLASAGN----AFYVCGFPNDNPQRVRRFA-VGRTRFMIMLLTA---HFTRIAVGDCRDGILFY 255 (415)
Q Consensus 186 ~g~V~al~~~~-g-~yLl~~vg~----~l~v~~~~~~~~~~L~~~a-~~~~~~~i~sI~~---~~n~IlVGD~~~Sv~ll 255 (415)
.++|.+++-.. | .+|+++... .|++|++.... +.+.... .+.. .+.++.. .+++++.|..-..+.++
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~dg~v~~w 290 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLNQGHQK--GILSLDWCHQDEHLLLSSGRDNTVLLW 290 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCCSCCSS--CEEEEEECSSCSSCEEEEESSSEEEEE
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEeecCccC--ceeEEEeCCCCCCeEEEEeCCCCEEEe
Confidence 57788887443 3 435555544 89999998632 2232222 2222 3555543 56789999887777665
Q ss_pred EEEccCCeEEEEecCCCcceeEEEEeeeC--CeEEEeCCCCcEEEEecCC
Q 014962 256 SYHEDARKLEQIYCDPSQRLVADCVLMDV--DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 256 ~y~~~~~~L~~varD~~~~~vta~~~Ld~--d~~l~aD~~gNl~vl~~~~ 303 (415)
. ...++....-. ....+++++.+-.+ ..++.+..+|.|.++++..
T Consensus 291 d--~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 291 N--PESAEQLSQFP-ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp C--SSSCCEEEEEE-CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred e--CCCCccceeec-CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 4 33333322222 23457778888654 4678888999999999765
No 104
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.02 E-value=1 Score=42.26 Aligned_cols=192 Identities=12% Similarity=0.059 Sum_probs=106.7
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeeecCCCCCCC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~~~~~~~~~ 95 (415)
....++++|+.+.++.+..+ ..|++.|..+++.+..+.-.. ..+.+ +.+. +..+|+.|..
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D-------~~v~~wd~~~~~~~~~~~~h~-~~v~~---~~~~~~~~~l~s~s~-------- 127 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWD-------KTLRLWDVATGETYQRFVGHK-SDVMS---VDIDKKASMIISGSR-------- 127 (319)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCS-SCEEE---EEECTTSCEEEEEET--------
T ss_pred cEEEEEECCCCCEEEEEeCC-------CEEEEEECCCCCeeEEEccCC-CcEEE---EEEcCCCCEEEEEeC--------
Confidence 45567788887776655433 469999999998877665322 23443 3343 4567777744
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
-|.|.+|++.. .
T Consensus 128 --------D~~i~vwd~~~------------------------------------------------------------~ 139 (319)
T 3frx_A 128 --------DKTIKVWTIKG------------------------------------------------------------Q 139 (319)
T ss_dssp --------TSCEEEEETTS------------------------------------------------------------C
T ss_pred --------CCeEEEEECCC------------------------------------------------------------C
Confidence 35677776651 0
Q ss_pred eEEEEEEEecCCceEEEeeeC-------CceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEee
Q 014962 176 QLRLAYSTTWPGMVLAICPYL-------DRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~~-------g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD 247 (415)
.+..+ ....+.|.+++-.. +.+|+.+ ....|.+|++... +.......+..+.........+.+|+.|.
T Consensus 140 ~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 140 CLATL--LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF--QIEADFIGHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EEEEE--CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT--EEEEEECCCCSCEEEEEECTTSSEEEEEE
T ss_pred eEEEE--eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc--hhheeecCCCCcEEEEEEcCCCCEEEEEe
Confidence 11111 12345566555332 3324433 4455899999752 22222222333334444445678999998
Q ss_pred cCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 248 ~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
.-..+.++. ....+....-. ....+.++.|-.+..++++-....+.++..+.
T Consensus 216 ~dg~i~iwd--~~~~~~~~~~~--~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~ 267 (319)
T 3frx_A 216 KDGEIMLWN--LAAKKAMYTLS--AQDEVFSLAFSPNRYWLAAATATGIKVFSLDP 267 (319)
T ss_dssp TTCEEEEEE--TTTTEEEEEEE--CCSCEEEEEECSSSSEEEEEETTEEEEEEETT
T ss_pred CCCeEEEEE--CCCCcEEEEec--CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCc
Confidence 888886654 44443322222 13467888886555444443345577777553
No 105
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.89 E-value=1.2 Score=43.75 Aligned_cols=111 Identities=7% Similarity=-0.002 Sum_probs=62.4
Q ss_pred CCceEEEeee-CCceEEEEeCC----eEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCc-EEEEEEEc
Q 014962 186 PGMVLAICPY-LDRYFLASAGN----AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDG-ILFYSYHE 259 (415)
Q Consensus 186 ~g~V~al~~~-~g~yLl~~vg~----~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~S-v~ll~y~~ 259 (415)
.+.+.+++-- .|++|+.+... +|++|++... + ++.................+++|+++....+ ..++.|+.
T Consensus 266 ~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~--~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG--A-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS--C-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC--C-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 4556666532 46656665542 5777777642 2 3322222222233444557888888776543 56778888
Q ss_pred cCCeEEEEecCCCcceeEEEEeeeCC-eEEEeCCCC---cEEEEecC
Q 014962 260 DARKLEQIYCDPSQRLVADCVLMDVD-TAVVSDRKG---SIAVLSCS 302 (415)
Q Consensus 260 ~~~~L~~varD~~~~~vta~~~Ld~d-~~l~aD~~g---Nl~vl~~~ 302 (415)
+.+++..+.... .+.++.+-.++ .++.+..++ .|+++...
T Consensus 343 ~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 343 ATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp TTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 877776665542 66777775443 444443333 57776643
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.75 E-value=0.12 Score=51.14 Aligned_cols=112 Identities=14% Similarity=0.183 Sum_probs=67.3
Q ss_pred cCCceEEEee--eCCceEEEE-eCCeEEEEeeCCCCccceeeeeeec-cceEE--EEEEEeCCEEEEeecCCcEEEEEEE
Q 014962 185 WPGMVLAICP--YLDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGR-TRFMI--MLLTAHFTRIAVGDCRDGILFYSYH 258 (415)
Q Consensus 185 ~~g~V~al~~--~~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~-~~~~i--~sI~~~~n~IlVGD~~~Sv~ll~y~ 258 (415)
-.++|++|+- .++.+|+.+ ..+.|.+|++.. ..++.....+ ....+ ......+++|++|+.-..|.++.
T Consensus 163 H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd-- 237 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG---NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLN-- 237 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS---CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEE--
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC---CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeec--
Confidence 4678999883 456634433 235699999975 2233322221 12223 34445678999999888887764
Q ss_pred ccCCeEEEEecCCCcceeEEEEeeeC-C-eEEEeCCCCcEEEEecCC
Q 014962 259 EDARKLEQIYCDPSQRLVADCVLMDV-D-TAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 259 ~~~~~L~~varD~~~~~vta~~~Ld~-d-~~l~aD~~gNl~vl~~~~ 303 (415)
.....+..+ .....+|+++.|-.. + .++.+..+|.|.++....
T Consensus 238 ~~~~~~~~~--~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 238 MDGKELWNL--RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp SSSCBCCCS--BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred cCcceeEEE--ecccceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 333333222 224557888888533 3 466778889988887543
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.74 E-value=1.5 Score=48.19 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=71.5
Q ss_pred cCCceEEEeeeCCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCe
Q 014962 185 WPGMVLAICPYLDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK 263 (415)
Q Consensus 185 ~~g~V~al~~~~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~ 263 (415)
-.++|.+|+-..|++|+.+ -.+.|.+|++.. .+.+.... +......+.....++++++|+.-..|.++ +....+
T Consensus 57 ~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~--~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lw--d~~~~~ 131 (902)
T 2oaj_A 57 DRSAIKEMRFVKGIYLVVINAKDTVYVLSLYS--QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVY--DIDRDQ 131 (902)
T ss_dssp SCCCEEEEEEETTTEEEEEETTCEEEEEETTT--CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEE--ETTTTE
T ss_pred CCCCEEEEEEcCCCEEEEEECcCeEEEEECCC--CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEE--ECCCCc
Confidence 4678999985558745543 456799999975 23344432 22233344444578899999998888665 555555
Q ss_pred EEEEe--------c--CCCcceeEEEEeeeC--CeEEEeCCCCcEEEEecCC
Q 014962 264 LEQIY--------C--DPSQRLVADCVLMDV--DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 264 L~~va--------r--D~~~~~vta~~~Ld~--d~~l~aD~~gNl~vl~~~~ 303 (415)
+...- + ......|+++.|-.. ..++++..+|.+ ++....
T Consensus 132 ~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~ 182 (902)
T 2oaj_A 132 LSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE 182 (902)
T ss_dssp EEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT
T ss_pred cccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC
Confidence 53221 1 223457888888633 478888889998 887543
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.69 E-value=1.3 Score=43.46 Aligned_cols=127 Identities=8% Similarity=0.040 Sum_probs=77.1
Q ss_pred eEEEEEEEecCCceEEEeeeC--CceEEEEe--CCeEEEEeeCCC-------C-ccceeeeeeeccceEEEEEEEeCC-E
Q 014962 176 QLRLAYSTTWPGMVLAICPYL--DRYFLASA--GNAFYVCGFPND-------N-PQRVRRFAVGRTRFMIMLLTAHFT-R 242 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~~--g~yLl~~v--g~~l~v~~~~~~-------~-~~~L~~~a~~~~~~~i~sI~~~~n-~ 242 (415)
+++........++|++|+-.. +. ++++. ...|++|++... . .+.+.....+.......+....+. +
T Consensus 118 ~~~~~~~~~h~~~v~~l~~~p~~~~-~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 118 KIEIEIKINHEGEVNRARYMPQNAC-VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp CEEEEEEEEESSCCSEEEEETTEEE-EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred ceEEEEEEcCCCcEEEEEECCCCCc-EEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 677777777889999999775 34 55544 346999999751 0 112222233333333344444455 8
Q ss_pred EEEeecCCcEEEEEEEccC---CeEEEE-ecCCCcceeEEEEeee--CCeEEEeCCCCcEEEEecCC
Q 014962 243 IAVGDCRDGILFYSYHEDA---RKLEQI-YCDPSQRLVADCVLMD--VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 243 IlVGD~~~Sv~ll~y~~~~---~~L~~v-arD~~~~~vta~~~Ld--~d~~l~aD~~gNl~vl~~~~ 303 (415)
++.|+.-..+.++..+... ..+... .-......+.++.+-. ...++.+..+|.|.++....
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 9999988888887665421 111111 1113445678888764 34667778899999998654
No 109
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.67 E-value=1.2 Score=49.86 Aligned_cols=101 Identities=7% Similarity=-0.001 Sum_probs=62.1
Q ss_pred CceEEEEeCCeEEEEeeCCCCccceeeee-eeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcce
Q 014962 197 DRYFLASAGNAFYVCGFPNDNPQRVRRFA-VGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRL 275 (415)
Q Consensus 197 g~yLl~~vg~~l~v~~~~~~~~~~L~~~a-~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~ 275 (415)
|++|+++.++.+.+|++... ..+.... .+............++++++|+.-..+.++. ...+....... ....+
T Consensus 810 g~~l~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd--~~~~~~~~~~~-~h~~~ 884 (1249)
T 3sfz_A 810 GDKIIVAAKNKVLLFDIHTS--GLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWN--IDSRLKVADCR-GHLSW 884 (1249)
T ss_dssp SSEEEEEETTEEEEEETTTC--CEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEE--TTTTEEEEEEC-CCSSC
T ss_pred CCEEEEEcCCcEEEEEecCC--CceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEE--cCCCceeeecC-CCccc
Confidence 44456666666777766542 2222211 1222333444455678899998888876654 44454444333 35668
Q ss_pred eEEEEeeeC-CeEEEeCCCCcEEEEecC
Q 014962 276 VADCVLMDV-DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 276 vta~~~Ld~-d~~l~aD~~gNl~vl~~~ 302 (415)
++++.|-.+ ..++.+..+|.+.+++..
T Consensus 885 v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 885 VHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 888888644 478888999999999853
No 110
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.67 E-value=2.6 Score=44.15 Aligned_cols=112 Identities=8% Similarity=-0.018 Sum_probs=64.9
Q ss_pred CCceEEEeeeC-C--ceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccC
Q 014962 186 PGMVLAICPYL-D--RYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 186 ~g~V~al~~~~-g--~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
.+.|.+++--. + .+|+.+ ..+.|.+|++.. .+.+.....+...+..+.+...+++|+.|..-..|.++. ...
T Consensus 517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~--~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd--~~~ 592 (694)
T 3dm0_A 517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN--CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD--LAE 592 (694)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEE--TTT
T ss_pred CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC--CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE--CCC
Confidence 34566665332 1 324443 456699999976 233333333333444444555678999999888887664 434
Q ss_pred CeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 262 RKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 262 ~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
++....-. ....+.++.|-.++.++++-.++.|.++....
T Consensus 593 ~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 593 GKKLYSLE--ANSVIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp TEEEECCB--CSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred CceEEEec--CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 43322211 23457777776666666665667788888543
No 111
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.62 E-value=1.5 Score=41.09 Aligned_cols=81 Identities=17% Similarity=0.047 Sum_probs=50.9
Q ss_pred ceEEEee-eCCceEEEEe--CCeEEEEeeCCCCccceeeeeeecc---ceEEEEEEEeCCEEEEeecC-CcEEEEEEEcc
Q 014962 188 MVLAICP-YLDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRT---RFMIMLLTAHFTRIAVGDCR-DGILFYSYHED 260 (415)
Q Consensus 188 ~V~al~~-~~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~---~~~i~sI~~~~n~IlVGD~~-~Sv~ll~y~~~ 260 (415)
.+.+++- -.|++|+++. .+.|.+|++..++ .++....... ...-..+...+.+|++++.. ..+.+++++.+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g--~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG--HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGG--CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCC--cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 3555552 2467565543 4779999997432 2333222222 22334455677899999876 67888888888
Q ss_pred CCeEEEEecC
Q 014962 261 ARKLEQIYCD 270 (415)
Q Consensus 261 ~~~L~~varD 270 (415)
.+++..+...
T Consensus 319 tg~l~~~~~~ 328 (347)
T 3hfq_A 319 SGKLSLLQKD 328 (347)
T ss_dssp TCCEEEEEEE
T ss_pred CCeEEecccc
Confidence 8888877754
No 112
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.58 E-value=1.4 Score=40.66 Aligned_cols=117 Identities=9% Similarity=0.055 Sum_probs=70.3
Q ss_pred cCCceEEEeeeC---CceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--e-------------CCEEEE
Q 014962 185 WPGMVLAICPYL---DRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--H-------------FTRIAV 245 (415)
Q Consensus 185 ~~g~V~al~~~~---g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~-------------~n~IlV 245 (415)
-.++|.+++-.. |.+|+++ ..+.|.+|++.............+.. .+.++.- . +.+|+.
T Consensus 98 h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~~~~~~~~~~~~~l~s 175 (297)
T 2pm7_B 98 HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASWAPATIEEDGEHNGTKESRKFVT 175 (297)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS--CEEEEEECCCC------------CCEEEE
T ss_pred CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC--ccceEeecCCcccccccCCCCCCcceEEE
Confidence 356788887432 5535543 45679999997532111111111222 2333332 1 458899
Q ss_pred eecCCcEEEEEEEccCCeEEEEe-cCCCcceeEEEEeeeC----CeEEEeCCCCcEEEEecCC
Q 014962 246 GDCRDGILFYSYHEDARKLEQIY-CDPSQRLVADCVLMDV----DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 246 GD~~~Sv~ll~y~~~~~~L~~va-rD~~~~~vta~~~Ld~----d~~l~aD~~gNl~vl~~~~ 303 (415)
|..-..|.++.++.......... -..+..+|.++.|-.+ ..++.+..+|.+.+.....
T Consensus 176 gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 176 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 99989999988876543332221 1235668889988543 3677888899999998653
No 113
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.54 E-value=1.7 Score=41.24 Aligned_cols=113 Identities=11% Similarity=0.077 Sum_probs=72.8
Q ss_pred ecCCceEEEeeeC--CceEEEE-eCCeEEEEeeCCCCccceeeeeeec---cceEEEEEEEeCCEEEEeecCCcEEEEEE
Q 014962 184 TWPGMVLAICPYL--DRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGR---TRFMIMLLTAHFTRIAVGDCRDGILFYSY 257 (415)
Q Consensus 184 ~~~g~V~al~~~~--g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~---~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y 257 (415)
...++|.+++-.. +.+|+++ ....|.+|++.. +.++...... .......+...++++++|+.-..+.++..
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence 4678899988554 4535544 346799999985 2333322222 23344445556889999998888766554
Q ss_pred EccCCeEEEEecCCCcceeEEEEeeeCC--eEEEeCCCCcEEEEecCC
Q 014962 258 HEDARKLEQIYCDPSQRLVADCVLMDVD--TAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 258 ~~~~~~L~~varD~~~~~vta~~~Ld~d--~~l~aD~~gNl~vl~~~~ 303 (415)
....+..+. .....+.++.+-.++ .++.+..+|.|.++....
T Consensus 193 --~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 193 --DGHEIFKEK--LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp --TSCEEEEEE--CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred --CCCEEEEec--cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 444444443 245678888887554 578888999999998654
No 114
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.50 E-value=1.5 Score=45.46 Aligned_cols=196 Identities=8% Similarity=0.014 Sum_probs=115.7
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeC------CCCCeEEEEEEEEEC-CeeEEEEeeecC
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKL------ELGETGKSMELVRVG-HEQVLVVGTSLS 89 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l------~~~E~~~si~~~~l~-~~~~lvVGT~~~ 89 (415)
..+.++++|+.+.++.+..+ ..|+|.|..+++.+..+.- .-...+. .+.|. +..+|+.|..
T Consensus 192 ~V~~v~fspdg~~las~s~D-------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~---~v~~spdg~~l~s~s~-- 259 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGD-------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF---GLTWSPDGTKIASASA-- 259 (611)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEE---EEEECTTSSEEEEEET--
T ss_pred ceEEEEECCCCCEEEEEECC-------CcEEEEECCCCcEeeeeccccccccccCCCEE---EEEECCCCCEEEEEeC--
Confidence 46678889988877666533 3599999988887765532 1122333 44454 4577776643
Q ss_pred CCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccc
Q 014962 90 SGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKL 169 (415)
Q Consensus 90 ~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~ 169 (415)
-|.|.+|++.. |
T Consensus 260 --------------D~~v~lWd~~~---------------------------------------------------~--- 271 (611)
T 1nr0_A 260 --------------DKTIKIWNVAT---------------------------------------------------L--- 271 (611)
T ss_dssp --------------TSEEEEEETTT---------------------------------------------------T---
T ss_pred --------------CCeEEEEeCCC---------------------------------------------------C---
Confidence 36788887762 0
Q ss_pred cccccceEEEE-EEEecCCceEEEeeeCCceEEE-EeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEee
Q 014962 170 EETETWQLRLA-YSTTWPGMVLAICPYLDRYFLA-SAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247 (415)
Q Consensus 170 ~~~~~~~L~l~-~~~~~~g~V~al~~~~g~yLl~-~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD 247 (415)
..++.+ ........+.++.. .+.+|+. +..+.+.+|+.... +.++...-+......+.....+.+|+.|.
T Consensus 272 -----~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~~--~~~~~~~gh~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 272 -----KVEKTIPVGTRIEDQQLGIIW-TKQALVSISANGFINFVNPELG--SIDQVRYGHNKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp -----EEEEEEECCSSGGGCEEEEEE-CSSCEEEEETTCCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred -----ceeeeecCCCCccceeEEEEE-cCCEEEEEeCCCcEEEEeCCCC--CcceEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 011111 00112233334333 4543444 45566888987642 22322222333334444445678999999
Q ss_pred cCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecC
Q 014962 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 248 ~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~ 302 (415)
.-..+.++ +...+....+-.+.....+.++.+-+++.++.+-.++.+.++...
T Consensus 344 ~D~~v~~W--d~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 344 AEGHINSW--DISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp TTSCEEEE--ETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSS
T ss_pred CCCcEEEE--ECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecC
Confidence 88888654 555555555544556778888888877778888788888877654
No 115
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.43 E-value=2.1 Score=41.61 Aligned_cols=111 Identities=13% Similarity=0.249 Sum_probs=66.4
Q ss_pred EecCCceEEEee--eCCceEEE-EeC---CeEEEEeeCCCCccceeeeeeeccceEEEEE--EEeCCEEEEee--cCCcE
Q 014962 183 TTWPGMVLAICP--YLDRYFLA-SAG---NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL--TAHFTRIAVGD--CRDGI 252 (415)
Q Consensus 183 ~~~~g~V~al~~--~~g~yLl~-~vg---~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI--~~~~n~IlVGD--~~~Sv 252 (415)
....++|.+++- ..+. +++ +.| ..|.+|++... +.+.... ....+.++ ...++.++++. .-..+
T Consensus 273 ~~~~~~V~~~~~~p~~~~-~la~~~gs~D~~I~iwd~~t~--~~~~~~~---~~~~v~~~~~~~~~~~lv~~sg~~d~~I 346 (420)
T 4gga_A 273 TQHQGAVKAVAWCPWQSN-VLATGGGTSDRHIRIWNVCSG--ACLSAVD---AHSQVCSILWSPHYKELISGHGFAQNQL 346 (420)
T ss_dssp CCCSSCEEEEEECTTCTT-EEEEEECTTTCEEEEEETTTT--EEEEEEE---CSSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred cccCCceeeeeeCCCccc-EEEEEeecCCCEEEEEeCCcc--ccceeec---cccceeeeeecCCCCeEEEEEecCCCEE
Confidence 456788888774 3455 544 444 46999999752 3333322 22233444 34567777754 44566
Q ss_pred EEEEEEccCCeE-EEEecCCCcceeEEEEee-eCCeEEEeCCCCcEEEEecCC
Q 014962 253 LFYSYHEDARKL-EQIYCDPSQRLVADCVLM-DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 253 ~ll~y~~~~~~L-~~varD~~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~~~ 303 (415)
.++.+ ...+. ..+. .+...|+++.|- |...++.+..+|.|.+.++.+
T Consensus 347 ~iwd~--~~~~~v~~l~--gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 347 VIWKY--PTMAKVAELK--GHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEET--TTCCEEEEEC--CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEC--CCCcEEEEEc--CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 66544 33333 3332 245678888886 445788888999999998654
No 116
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.43 E-value=0.91 Score=43.75 Aligned_cols=115 Identities=4% Similarity=0.027 Sum_probs=69.6
Q ss_pred cCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeecc-------ceEEEEEEEeCCEEEEeecCCcEEEE
Q 014962 185 WPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRT-------RFMIMLLTAHFTRIAVGDCRDGILFY 255 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~-------~~~i~sI~~~~n~IlVGD~~~Sv~ll 255 (415)
..++|.+|+-. .|.+|+.+ -...|.+|++... +.+........ ....+.....+.++++|..-..+.++
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG--HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT--EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC--cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence 46788888754 45634433 2346999999862 22322111100 12334445578899999887777665
Q ss_pred EEEccCCeEE-EEec--CCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 256 SYHEDARKLE-QIYC--DPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 256 ~y~~~~~~L~-~var--D~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
+....+.. .+.. ......|+++.|-. ...++.+..+|.|.+..+..
T Consensus 326 --d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 326 --DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp --ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred --ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 54443332 3322 34556788888754 45788889999999998653
No 117
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.42 E-value=1.3 Score=40.63 Aligned_cols=72 Identities=8% Similarity=0.036 Sum_probs=46.5
Q ss_pred EEEEeCCC------ccCEEEEecCCCEEEEEEEee--CCCc---ceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC
Q 014962 9 VRKFHLGG------TPKKVLYHSESRLLIVMRTEL--NNDT---CSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG 77 (415)
Q Consensus 9 i~~i~L~~------tp~~I~y~~~~~~~~v~~~~~--~~~~---~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~ 77 (415)
+++++++. .|+.++++|+.+.++++.... .... ....|.++|..+++.+..+... ..+.++. +.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~---~s 143 (337)
T 1pby_B 69 LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLA---WA 143 (337)
T ss_dssp EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEE---EC
T ss_pred EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeE---EC
Confidence 45677766 899999999998777775321 1111 2368999999999888777653 3333332 33
Q ss_pred -CeeEEEEe
Q 014962 78 -HEQVLVVG 85 (415)
Q Consensus 78 -~~~~lvVG 85 (415)
+..+++++
T Consensus 144 ~dg~~l~~~ 152 (337)
T 1pby_B 144 RDGSKLYGL 152 (337)
T ss_dssp TTSSCEEEE
T ss_pred CCCCEEEEe
Confidence 44555555
No 118
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.37 E-value=1 Score=43.13 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=56.9
Q ss_pred CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcc
Q 014962 196 LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR 274 (415)
Q Consensus 196 ~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~ 274 (415)
.|. |.++. +..|+.++.... ..+++. .. . ....+...++.|++++....+ +.|+...+++.--.......
T Consensus 239 ~~~-v~~~~~~g~l~~~d~~tG-~~~w~~-~~---~-~~~~~~~~~~~l~~~~~~g~l--~~~d~~tG~~~w~~~~~~~~ 309 (376)
T 3q7m_A 239 NGV-VFALAYNGNLTALDLRSG-QIMWKR-EL---G-SVNDFIVDGNRIYLVDQNDRV--MALTIDGGVTLWTQSDLLHR 309 (376)
T ss_dssp TTE-EEEECTTSCEEEEETTTC-CEEEEE-CC---C-CEEEEEEETTEEEEEETTCCE--EEEETTTCCEEEEECTTTTS
T ss_pred CCE-EEEEecCcEEEEEECCCC-cEEeec-cC---C-CCCCceEECCEEEEEcCCCeE--EEEECCCCcEEEeecccCCC
Confidence 455 66554 567888887642 112222 11 1 134456679999999876665 66777766654333322222
Q ss_pred eeEEEEeeeCCeEEEeCCCCcEEEEec
Q 014962 275 LVADCVLMDVDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 275 ~vta~~~Ld~d~~l~aD~~gNl~vl~~ 301 (415)
... .-.+.++.+++++.+|.|+++..
T Consensus 310 ~~~-~~~~~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 310 LLT-SPVLYNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp CCC-CCEEETTEEEEECTTSEEEEEET
T ss_pred ccc-CCEEECCEEEEEeCCCeEEEEEC
Confidence 222 22346788888999999998883
No 119
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.28 E-value=0.31 Score=47.27 Aligned_cols=77 Identities=9% Similarity=0.085 Sum_probs=45.2
Q ss_pred CceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeeeeccc---------------eEEEEEEEeCCEEEEeecCC
Q 014962 187 GMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR---------------FMIMLLTAHFTRIAVGDCRD 250 (415)
Q Consensus 187 g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~---------------~~i~sI~~~~n~IlVGD~~~ 250 (415)
++|.+++-- .|++|+++..+.|.+|++..+. +.+.....+... .+.......+.+|+.|..-.
T Consensus 286 ~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg 364 (447)
T 3dw8_B 286 SSISDVKFSHSGRYMMTRDYLSVKVWDLNMEN-RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN 364 (447)
T ss_dssp TCEEEEEECTTSSEEEEEESSEEEEEETTCCS-SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT
T ss_pred ceEEEEEECCCCCEEEEeeCCeEEEEeCCCCc-cccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCC
Confidence 478888743 4676777766889999997532 223332222100 11144556678888888877
Q ss_pred cEEEEEEEccCCeEEE
Q 014962 251 GILFYSYHEDARKLEQ 266 (415)
Q Consensus 251 Sv~ll~y~~~~~~L~~ 266 (415)
.|.++ +...++...
T Consensus 365 ~v~iw--d~~~~~~~~ 378 (447)
T 3dw8_B 365 FFRMF--DRNTKRDIT 378 (447)
T ss_dssp EEEEE--ETTTCCEEE
T ss_pred EEEEE--EcCCCccee
Confidence 77665 444444433
No 120
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.20 E-value=1.8 Score=44.61 Aligned_cols=50 Identities=14% Similarity=0.086 Sum_probs=41.3
Q ss_pred eEEEEeCCCccCEEEEec----CCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCC
Q 014962 8 NVRKFHLGGTPKKVLYHS----ESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLE 63 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~----~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~ 63 (415)
.+++++.+..|+.++++| +.+.++++.. +...|.++|..|++.+..+...
T Consensus 214 ~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~------~~~~v~v~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 214 KVAEIKIGIEARSVESSKFKGYEDRYTIAGAY------WPPQFAIMDGETLEPKQIVSTR 267 (543)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEE------ESSEEEEEETTTCCEEEEEECC
T ss_pred EEEEEecCCCcceEEeCCCcCCCCCEEEEEEc------cCCeEEEEeccccccceeeccc
Confidence 357889999999999999 9998887753 2356999999999999888763
No 121
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.20 E-value=2 Score=40.18 Aligned_cols=62 Identities=21% Similarity=0.386 Sum_probs=41.0
Q ss_pred CEEEEeecCCcEEEEEEEccCCeEEEE-ecCCCcceeEEEEeeeC-----CeEEEeCCCCcEEEEecCC
Q 014962 241 TRIAVGDCRDGILFYSYHEDARKLEQI-YCDPSQRLVADCVLMDV-----DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 241 n~IlVGD~~~Sv~ll~y~~~~~~L~~v-arD~~~~~vta~~~Ld~-----d~~l~aD~~gNl~vl~~~~ 303 (415)
.+++.|..-..+.++..+.. +.+..+ .-..+..+|.++.|-.+ ..++.+..+|.|.++....
T Consensus 180 ~~l~sgs~D~~v~lWd~~~~-~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 180 KRFASGGCDNLIKLWKEEED-GQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CBEECCBTTSBCCEEEECTT-SCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ceEEEecCCCeEEEEEeCCC-CccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 57888888888888776432 222111 12235568888888532 4688889999999998643
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.13 E-value=2.4 Score=40.47 Aligned_cols=118 Identities=11% Similarity=0.020 Sum_probs=67.2
Q ss_pred ecCCceEEEeee-CCceEEEEe-CCe-EEEEeeCCCCccceeeeee--eccceEEEEEEEeCCEEEEeecCCcEEEEEEE
Q 014962 184 TWPGMVLAICPY-LDRYFLASA-GNA-FYVCGFPNDNPQRVRRFAV--GRTRFMIMLLTAHFTRIAVGDCRDGILFYSYH 258 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~v-g~~-l~v~~~~~~~~~~L~~~a~--~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~ 258 (415)
.-.++|.+|+-- +|++|+.|. ... |.+|++.. .+.+..... +............+++++.|..-..+.++.++
T Consensus 193 ~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~--~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED--GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT--CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC--CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 457889998833 567455443 344 89999985 233444331 33334444445567899999888888887765
Q ss_pred ccC-CeEEE-----EecCCCcce--------------eEEEEeeeCC-eEEEeCCCCcEEEEecCC
Q 014962 259 EDA-RKLEQ-----IYCDPSQRL--------------VADCVLMDVD-TAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 259 ~~~-~~L~~-----varD~~~~~--------------vta~~~Ld~d-~~l~aD~~gNl~vl~~~~ 303 (415)
... ++... +.+-+...| ...+.+-.++ .++++..+|.+.++.+.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 271 NDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp CCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred CCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 321 11111 111111222 1334444333 677788888888877644
No 123
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.11 E-value=2.4 Score=40.42 Aligned_cols=115 Identities=11% Similarity=0.024 Sum_probs=70.0
Q ss_pred cCCceEEEee--e-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEcc
Q 014962 185 WPGMVLAICP--Y-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 185 ~~g~V~al~~--~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
-.+.|.+++- - .|.+|+.+ ....|++|++... +.+.....+......+.....+++++.|..-..+.++..+.
T Consensus 195 h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~- 271 (354)
T 2pbi_B 195 HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG--QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA- 271 (354)
T ss_dssp CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-
T ss_pred CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC--cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC-
Confidence 3566777653 2 35535543 4567999999762 33433333333333444444678999999888887764432
Q ss_pred CCeEEEEecCCCcceeEEEEee-eCCeEEEeCCCCcEEEEecC
Q 014962 261 ARKLEQIYCDPSQRLVADCVLM-DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 261 ~~~L~~varD~~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~~ 302 (415)
...+..+..+.....++++.|- +...++++..+|.|.++...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 272 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 2233444444444567777775 34577888899999999864
No 124
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.94 E-value=2.1 Score=38.88 Aligned_cols=191 Identities=13% Similarity=0.088 Sum_probs=107.3
Q ss_pred EEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCC-CeEEEEEEEEECCeeEEEEeeecCCCCCCCCCCC
Q 014962 21 VLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELG-ETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGE 99 (415)
Q Consensus 21 I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~-E~~~si~~~~l~~~~~lvVGT~~~~~~~~~~~~e 99 (415)
|.+++. ++++|+. + ..|+|-|..|++.+..+++... ..|.|+.. ..+..+++.|..
T Consensus 31 l~WS~~-~~lAvg~-D-------~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~--~~~~~~l~sgs~------------ 87 (318)
T 4ggc_A 31 VDWSSG-NVLAVAL-D-------NSVYLWSASSGDILQLLQMEQPGEYISSVAW--IKEGNYLAVGTS------------ 87 (318)
T ss_dssp EEECTT-SEEEEEE-T-------TEEEEEETTTCCEEEEEECCSTTCCEEEEEE--CTTSSEEEEEET------------
T ss_pred EEECCC-CEEEEEe-C-------CEEEEEECCCCCEEEEEEecCCCCeEEEEEE--CCCCCEEEEEEC------------
Confidence 556654 4666553 2 3599999999999998888764 34555432 235588998855
Q ss_pred ccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccceEEE
Q 014962 100 AESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179 (415)
Q Consensus 100 ~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~l 179 (415)
-|.|.+|++.. +..++.
T Consensus 88 ----Dg~v~iw~~~~-----------------------------------------------------------~~~~~~ 104 (318)
T 4ggc_A 88 ----SAEVQLWDVQQ-----------------------------------------------------------QKRLRN 104 (318)
T ss_dssp ----TSEEEEEETTT-----------------------------------------------------------TEEEEE
T ss_pred ----CCcEEEeecCC-----------------------------------------------------------ceeEEE
Confidence 46788887762 011221
Q ss_pred EEEEecCCceEEEeeeCCceEEEEeCCe-EEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEE
Q 014962 180 AYSTTWPGMVLAICPYLDRYFLASAGNA-FYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYH 258 (415)
Q Consensus 180 ~~~~~~~g~V~al~~~~g~yLl~~vg~~-l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~ 258 (415)
. ..-...+.++... +.+|+.+.... +.++...... ..+.....+............+++++.|..-..+.++...
T Consensus 105 ~--~~h~~~~~~~~~~-~~~l~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 105 M--TSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp E--ECCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred e--cCccceEEEeecC-CCEEEEEecCCceEeeecCCCc-eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 1 2334556665544 55355444443 4555554421 2233323333344455555677899999988888776543
Q ss_pred ccCCe-EEEEecCCCcceeEEEEeeeCC-e---EEEeCCCCcEEEEec
Q 014962 259 EDARK-LEQIYCDPSQRLVADCVLMDVD-T---AVVSDRKGSIAVLSC 301 (415)
Q Consensus 259 ~~~~~-L~~varD~~~~~vta~~~Ld~d-~---~l~aD~~gNl~vl~~ 301 (415)
..+.. ............+.++.+...+ . +..++.++.+.+...
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 32211 1112222334456666665433 2 234567788877764
No 125
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.82 E-value=2.6 Score=39.30 Aligned_cols=166 Identities=15% Similarity=0.067 Sum_probs=98.8
Q ss_pred EEEEeCCCc--cCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEee
Q 014962 9 VRKFHLGGT--PKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGT 86 (415)
Q Consensus 9 i~~i~L~~t--p~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT 86 (415)
++.+|.... -.-+.|++ +.+.+.+... ..|.|+.+|+.|++++.++.+++.--...+... ++..++ .|
T Consensus 12 ~~~~phd~~~ftqGL~~~~--~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~---~~~ly~-lt 81 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLR--GHLYESTGET----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW---RDRLIQ-LT 81 (243)
T ss_dssp EEEEECCTTCCEEEEEEET--TEEEEEECCT----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE---TTEEEE-EE
T ss_pred EEEcCCCCccccccEEEEC--CEEEEECCCC----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEe---CCEEEE-EE
Confidence 344555442 23566666 4444444221 257899999999999999999876544444433 333333 34
Q ss_pred ecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCC
Q 014962 87 SLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG 166 (415)
Q Consensus 87 ~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g 166 (415)
- ..+++++|+..
T Consensus 82 w---------------~~~~v~v~D~~----------------------------------------------------- 93 (243)
T 3mbr_X 82 W---------------RNHEGFVYDLA----------------------------------------------------- 93 (243)
T ss_dssp S---------------SSSEEEEEETT-----------------------------------------------------
T ss_pred e---------------eCCEEEEEECC-----------------------------------------------------
Confidence 3 14566666655
Q ss_pred ccccccccceEEEEEEEecCCceEEEeeeCCceEEEEeCCe-EEEEeeCCCCccceeeeeeeccce---EEEEEEEeCCE
Q 014962 167 IKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNA-FYVCGFPNDNPQRVRRFAVGRTRF---MIMLLTAHFTR 242 (415)
Q Consensus 167 ~~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~~vg~~-l~v~~~~~~~~~~L~~~a~~~~~~---~i~sI~~~~n~ 242 (415)
.++++.+-+..+.-.+||.-.++ |+++-|.. |++++... -+.++.....+.+. .+..|...+.+
T Consensus 94 ---------tl~~~~ti~~~~~Gwglt~dg~~-L~vSdgs~~l~~iDp~t--~~~~~~I~V~~~g~~~~~lNeLe~~~G~ 161 (243)
T 3mbr_X 94 ---------TLTPRARFRYPGEGWALTSDDSH-LYMSDGTAVIRKLDPDT--LQQVGSIKVTAGGRPLDNLNELEWVNGE 161 (243)
T ss_dssp ---------TTEEEEEEECSSCCCEEEECSSC-EEEECSSSEEEEECTTT--CCEEEEEECEETTEECCCEEEEEEETTE
T ss_pred ---------cCcEEEEEeCCCCceEEeeCCCE-EEEECCCCeEEEEeCCC--CeEEEEEEEccCCcccccceeeEEeCCE
Confidence 23444444455555677766566 88876644 77777764 23344434333222 45667777889
Q ss_pred EEEeecCCcEEEEEEEccCCeEE
Q 014962 243 IAVGDCRDGILFYSYHEDARKLE 265 (415)
Q Consensus 243 IlVGD~~~Sv~ll~y~~~~~~L~ 265 (415)
|++..-+.- .+++.|+..++..
T Consensus 162 lyanvw~s~-~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 162 LLANVWLTS-RIARIDPASGKVV 183 (243)
T ss_dssp EEEEETTTT-EEEEECTTTCBEE
T ss_pred EEEEECCCC-eEEEEECCCCCEE
Confidence 998885543 5677888776543
No 126
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.81 E-value=2.3 Score=38.64 Aligned_cols=115 Identities=10% Similarity=-0.001 Sum_probs=67.6
Q ss_pred CCceEEEee----eCCceEEEEeCCeEEEEeeCCCCccceeee-eeeccceEEEEEEE--eC----CEEEEeecCCcEEE
Q 014962 186 PGMVLAICP----YLDRYFLASAGNAFYVCGFPNDNPQRVRRF-AVGRTRFMIMLLTA--HF----TRIAVGDCRDGILF 254 (415)
Q Consensus 186 ~g~V~al~~----~~g~yLl~~vg~~l~v~~~~~~~~~~L~~~-a~~~~~~~i~sI~~--~~----n~IlVGD~~~Sv~l 254 (415)
.+.+.+++- +.+.+|+++......+|.....+ .+... .+......|.++.. .+ ++++.|..-..+.+
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG--KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS--CEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC--ceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 345666653 23665777777776666665432 12111 11112224555554 44 57888998888988
Q ss_pred EEEEccCC--------------------------------------------eEEEEecCCCcceeEEEEeee-CCeEEE
Q 014962 255 YSYHEDAR--------------------------------------------KLEQIYCDPSQRLVADCVLMD-VDTAVV 289 (415)
Q Consensus 255 l~y~~~~~--------------------------------------------~L~~varD~~~~~vta~~~Ld-~d~~l~ 289 (415)
+..+.... ++...-+ .....|+++.+-. ...++.
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s 323 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHNGEVWSVSWNLTGTILSS 323 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEEC-TTSSCEEEEEECSSSCCEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe-cccccEEEEEEcCCCCEEEE
Confidence 88775310 1111111 2345688888853 457888
Q ss_pred eCCCCcEEEEecCC
Q 014962 290 SDRKGSIAVLSCSD 303 (415)
Q Consensus 290 aD~~gNl~vl~~~~ 303 (415)
+..+|.|.++++..
T Consensus 324 ~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 324 AGDDGKVRLWKATY 337 (351)
T ss_dssp EETTSCEEEEEECT
T ss_pred ecCCCcEEEEecCc
Confidence 89999999999764
No 127
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.76 E-value=3.1 Score=39.93 Aligned_cols=114 Identities=9% Similarity=0.058 Sum_probs=68.2
Q ss_pred CCceEEEee--eCCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCC
Q 014962 186 PGMVLAICP--YLDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDAR 262 (415)
Q Consensus 186 ~g~V~al~~--~~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~ 262 (415)
.+.|.+++- .++.+|+.+ ....|.+|++.... +.++....+......+.....+++++.|..-..+.++ +...+
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lw--d~~~~ 281 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF--DMRTG 281 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEE--ETTTT
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEE--ECCCC
Confidence 456777763 356634433 34669999997422 2233323333333444444567788888887888665 44444
Q ss_pred eEE-EEecC-----CCcceeEEEEee-eCCeEEEeCCCCcEEEEecC
Q 014962 263 KLE-QIYCD-----PSQRLVADCVLM-DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 263 ~L~-~varD-----~~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~~ 302 (415)
+.. .+... ....+++++.|- +...++++..+|.|.++...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 333 33222 222357788875 45578888999999999853
No 128
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.72 E-value=2.3 Score=44.59 Aligned_cols=116 Identities=12% Similarity=0.072 Sum_probs=73.7
Q ss_pred EecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEcc
Q 014962 183 TTWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 183 ~~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
....+.|.+++-- .|++|+.+ ....|++|++.. .+.++....+......+.....+++|+.|..-..+.++ +..
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw--d~~ 502 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA--GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW--NTL 502 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE--CTT
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC--CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEE--ECC
Confidence 3456788888744 46645444 346799999975 23344433333343444444567789999888888665 443
Q ss_pred CCeEEEEec--CCCcceeEEEEeeeC---CeEEEeCCCCcEEEEecC
Q 014962 261 ARKLEQIYC--DPSQRLVADCVLMDV---DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 261 ~~~L~~var--D~~~~~vta~~~Ld~---d~~l~aD~~gNl~vl~~~ 302 (415)
......+.. ..+..+|+++.|-.+ ..++.+..+|.|.++...
T Consensus 503 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~ 549 (694)
T 3dm0_A 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 549 (694)
T ss_dssp SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT
T ss_pred CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC
Confidence 333333332 345667888888643 368888999999999864
No 129
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.63 E-value=3 Score=39.26 Aligned_cols=206 Identities=12% Similarity=0.017 Sum_probs=117.0
Q ss_pred eEEEEeCCCc--cCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEe
Q 014962 8 NVRKFHLGGT--PKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVG 85 (415)
Q Consensus 8 ~i~~i~L~~t--p~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVG 85 (415)
-++++|++.. |+-++|+++. .+.+++.. ...+.|+.+|+.|++++.++.++.+.....+... ++. +.+.
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~----~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~---g~~-lyv~ 81 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAEND-TLFESTGL----YGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL---NEK-LYQV 81 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTT-EEEEEECS----TTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE---TTE-EEEE
T ss_pred EEEEEECCCCCCcccEEEeCCC-eEEEECCC----CCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe---CCE-EEEE
Confidence 4688999974 7899999984 55555432 2247899999999999999999887666655443 333 3344
Q ss_pred eecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCC
Q 014962 86 TSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCD 165 (415)
Q Consensus 86 T~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 165 (415)
|- ..|++.+|+..
T Consensus 82 t~---------------~~~~v~viD~~---------------------------------------------------- 94 (266)
T 2iwa_A 82 VW---------------LKNIGFIYDRR---------------------------------------------------- 94 (266)
T ss_dssp ET---------------TCSEEEEEETT----------------------------------------------------
T ss_pred Ee---------------cCCEEEEEECC----------------------------------------------------
Confidence 33 14566665544
Q ss_pred CccccccccceEEEEEEEecC-CceEEEeeeCCceEEEEeC-CeEEEEeeCCCCccceeeeeeecc--ce-EEEEEEEeC
Q 014962 166 GIKLEETETWQLRLAYSTTWP-GMVLAICPYLDRYFLASAG-NAFYVCGFPNDNPQRVRRFAVGRT--RF-MIMLLTAHF 240 (415)
Q Consensus 166 g~~~~~~~~~~L~l~~~~~~~-g~V~al~~~~g~yLl~~vg-~~l~v~~~~~~~~~~L~~~a~~~~--~~-~i~sI~~~~ 240 (415)
.++++.+-++. +.-..|+.=.++ |+++-| ++|.+++... .+.++....... +. .+..+...+
T Consensus 95 ----------t~~v~~~i~~g~~~g~glt~Dg~~-l~vs~gs~~l~viD~~t--~~v~~~I~Vg~~~~p~~~~nele~~d 161 (266)
T 2iwa_A 95 ----------TLSNIKNFTHQMKDGWGLATDGKI-LYGSDGTSILYEIDPHT--FKLIKKHNVKYNGHRVIRLNELEYIN 161 (266)
T ss_dssp ----------TTEEEEEEECCSSSCCEEEECSSS-EEEECSSSEEEEECTTT--CCEEEEEECEETTEECCCEEEEEEET
T ss_pred ----------CCcEEEEEECCCCCeEEEEECCCE-EEEECCCCeEEEEECCC--CcEEEEEEECCCCcccccceeEEEEC
Confidence 12223333333 333456653345 777755 4577777754 233333332221 11 244555557
Q ss_pred CEEEEeecCCcEEEEEEEccCCeEEEEec----------CCCc-ceeEEEEeeeC--CeEEEe-CCCCcEEEEecCC
Q 014962 241 TRIAVGDCRDGILFYSYHEDARKLEQIYC----------DPSQ-RLVADCVLMDV--DTAVVS-DRKGSIAVLSCSD 303 (415)
Q Consensus 241 n~IlVGD~~~Sv~ll~y~~~~~~L~~var----------D~~~-~~vta~~~Ld~--d~~l~a-D~~gNl~vl~~~~ 303 (415)
.++++...... .+...|+..++....-. +..+ ..+.....++. +.++++ -..+++++.++.+
T Consensus 162 g~lyvn~~~~~-~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 162 GEVWANIWQTD-CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TEEEEEETTSS-EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CEEEEecCCCC-eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 78888875543 46777887664422211 1111 12333333443 355444 4577799988654
No 130
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.14 E-value=3.4 Score=37.85 Aligned_cols=112 Identities=5% Similarity=-0.009 Sum_probs=61.0
Q ss_pred ecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecCCcEEEEEEEcc
Q 014962 184 TWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
.-.++|++|+-- .|++|+.+ ..+.|.+|++... +.+.... ..-.+..+... ++++++|..-.++.++ +.+
T Consensus 213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--~~~~~~~---~~~~v~~~~~~~~~~~~~~~~d~~i~iw--d~~ 285 (340)
T 4aow_A 213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--KHLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIW--DLE 285 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--EEEEEEE---CSSCEEEEEECSSSSEEEEEETTEEEEE--ETT
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--ceeeeec---CCceEEeeecCCCCceeeccCCCEEEEE--ECC
Confidence 346789988733 46645443 3357999999862 3333322 12234444332 2334444434444433 333
Q ss_pred CCeEEE--------EecCCCcceeEEEEeeeC-CeEEEeCCCCcEEEEecC
Q 014962 261 ARKLEQ--------IYCDPSQRLVADCVLMDV-DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 261 ~~~L~~--------varD~~~~~vta~~~Ld~-d~~l~aD~~gNl~vl~~~ 302 (415)
...+.. ......+.+|+++.|-.+ ..++.+..+|.|.+++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 286 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp TTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 332222 222345668888888543 477888999999998854
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.94 E-value=3.8 Score=37.69 Aligned_cols=211 Identities=10% Similarity=0.107 Sum_probs=114.1
Q ss_pred eEEEEeCCCccCE-EEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEe
Q 014962 8 NVRKFHLGGTPKK-VLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVG-HEQVLVVG 85 (415)
Q Consensus 8 ~i~~i~L~~tp~~-I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVG 85 (415)
..+.++.+..|.. ++++|+.+.+++.. .. .....|.++|..+++.+..+... ..+. .+.+. +..++++.
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~---~~~~~i~v~d~~~~~~~~~~~~~--~~~~---~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAVTVT-GL---NHPFNMQSYSFLKNKFISTIPIP--YDAV---GIAISPNGNGLILI 145 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEEECC-CS---SSSCEEEEEETTTTEEEEEEECC--TTEE---EEEECTTSSCEEEE
T ss_pred eEEecccCCCCccceEECCCCCEEEEec-CC---CCcccEEEEECCCCCeEEEEECC--CCcc---ceEECCCCCEEEEE
Confidence 3677788888999 99999998777321 11 01127999999999988876653 3343 33343 33445554
Q ss_pred eecCCCCCCCCCCCccccccE-EEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCC
Q 014962 86 TSLSSGPAIMPSGEAESTKGR-LIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASC 164 (415)
Q Consensus 86 T~~~~~~~~~~~~e~~~~~Gr-i~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 164 (415)
... .++ |.+|++.. +
T Consensus 146 ~~~---------------~~~~i~~~~~~~---------------------------------------------~---- 161 (331)
T 3u4y_A 146 DRS---------------SANTVRRFKIDA---------------------------------------------D---- 161 (331)
T ss_dssp EET---------------TTTEEEEEEECT---------------------------------------------T----
T ss_pred ecC---------------CCceEEEEEECC---------------------------------------------C----
Confidence 331 245 88888872 0
Q ss_pred CCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccc---eeeeeeeccceEEEEEEE
Q 014962 165 DGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQR---VRRFAVGRTRFMIMLLTA 238 (415)
Q Consensus 165 ~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~---L~~~a~~~~~~~i~sI~~ 238 (415)
|. + .... .........+.+++-- .|++|+++. ++.|.+|++... +. +..... .....-..+..
T Consensus 162 -g~-~-----~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~--~~~~~~~~~~~-~~~~~~~~~sp 230 (331)
T 3u4y_A 162 -GV-L-----FDTG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP--ENITLLNAVGT-NNLPGTIVVSR 230 (331)
T ss_dssp -CC-E-----EEEE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST--TSCEEEEEEEC-SSCCCCEEECT
T ss_pred -Cc-E-----eecC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC--cccceeeeccC-CCCCceEEECC
Confidence 10 0 0111 1111333445555532 466566654 567999998752 33 322221 11222334455
Q ss_pred eCCEEEEeecCCcEEEEEEEccCCeEEEEe-------cCCCccee-EEEEee-eCCeEEE-eCCCCcEEEEecCC
Q 014962 239 HFTRIAVGDCRDGILFYSYHEDARKLEQIY-------CDPSQRLV-ADCVLM-DVDTAVV-SDRKGSIAVLSCSD 303 (415)
Q Consensus 239 ~~n~IlVGD~~~Sv~ll~y~~~~~~L~~va-------rD~~~~~v-ta~~~L-d~d~~l~-aD~~gNl~vl~~~~ 303 (415)
.+.++++++....- +..|+.+.+++..+. .+..+... .++.|- |...+++ +...+.+.+++...
T Consensus 231 dg~~l~v~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 231 DGSTVYVLTESTVD-VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp TSSEEEEECSSEEE-EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CCCEEEEEEcCCCE-EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 67888888764432 455787777763332 12222222 223443 2334444 44556788888643
No 132
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.93 E-value=3.5 Score=37.31 Aligned_cols=115 Identities=10% Similarity=0.149 Sum_probs=68.0
Q ss_pred EecCCceEEEeee--CCceEEEEeCC---eEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEee--cCCcEEEE
Q 014962 183 TTWPGMVLAICPY--LDRYFLASAGN---AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD--CRDGILFY 255 (415)
Q Consensus 183 ~~~~g~V~al~~~--~g~yLl~~vg~---~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD--~~~Sv~ll 255 (415)
....++|.++... .+..+.++.|. .|.+|+.... ..... ...............++.++++- .-..+.+
T Consensus 193 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~--~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~i- 268 (318)
T 4ggc_A 193 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--ACLSA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVI- 268 (318)
T ss_dssp CCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC--CEEEE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEE-
T ss_pred cccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc--ccccc-ccceeeeeeeeecccccceEEEEEcCCCEEEE-
Confidence 4456788877744 34523344443 4889988752 22222 33333444555555677776643 3445654
Q ss_pred EEEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEecCC
Q 014962 256 SYHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 256 ~y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~~~ 303 (415)
|+...+++...-+ .+...|+++.|-. ...++.+..+|.|.+.++.+
T Consensus 269 -wd~~~~~~~~~l~-gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 269 -WKYPTMAKVAELK-GHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp -EETTTCCEEEEEC-CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred -EECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 4554444433322 2456789988864 44788889999999998644
No 133
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.93 E-value=11 Score=42.87 Aligned_cols=113 Identities=12% Similarity=0.192 Sum_probs=72.6
Q ss_pred ecCCceEEEeee--C---CceEEEEe-----------CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEee
Q 014962 184 TWPGMVLAICPY--L---DRYFLASA-----------GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247 (415)
Q Consensus 184 ~~~g~V~al~~~--~---g~yLl~~v-----------g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD 247 (415)
+-+-.|.+++.. . ..||++|. ..++++|++.+ ..|+.+......-.+++|...++++++|
T Consensus 826 ~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~---~kL~lv~~~~v~g~v~al~~~~g~Lla~- 901 (1158)
T 3ei3_A 826 LQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD---GKLQTVAEKEVKGAVYSMVEFNGKLLAS- 901 (1158)
T ss_dssp CTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET---TEEEEEEEEEESSCEEEEEEETTEEEEE-
T ss_pred CCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC---CEEEEEEEEEcCCcCEEEeeeCCEEEEE-
Confidence 344557777743 2 24588876 24588998873 3455555444455688899999998887
Q ss_pred cCCcEEEEEEEccCCeEEEEecCCCcceeEEEEe-eeCCeEEEeCCCCcEEEEecCC
Q 014962 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 248 ~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~-Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
+-+.+.++.|..++ .|..-++.+.. +++... ...+.++++|....++++++.+
T Consensus 902 ig~~l~vy~l~~~~-~L~~~~~~~~~--i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~ 955 (1158)
T 3ei3_A 902 INSTVRLYEWTTEK-ELRTECNHYNN--IMALYLKTKGDFILVGDLMRSVLLLAYKP 955 (1158)
T ss_dssp ETTEEEEEEECTTS-CEEEEEEECCC--SCEEEEEEETTEEEEEESSBCEEEEEEET
T ss_pred cCCEEEEEECCCCc-eEEEEeecccc--EEEEEEeccCCEEEEEEhhheEEEEEEEc
Confidence 45778888887543 34422332221 222222 2467899999999999999865
No 134
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.74 E-value=4.1 Score=37.44 Aligned_cols=105 Identities=8% Similarity=0.023 Sum_probs=62.6
Q ss_pred CceEEEE-eCCeEEEEeeCCCCcc--ceeeeeeeccceEEEEEEE--e---CCEEEEeecCCcEEEEEEEccCC--eEEE
Q 014962 197 DRYFLAS-AGNAFYVCGFPNDNPQ--RVRRFAVGRTRFMIMLLTA--H---FTRIAVGDCRDGILFYSYHEDAR--KLEQ 266 (415)
Q Consensus 197 g~yLl~~-vg~~l~v~~~~~~~~~--~L~~~a~~~~~~~i~sI~~--~---~n~IlVGD~~~Sv~ll~y~~~~~--~L~~ 266 (415)
+++|+.| ..+.|.+|++...... .+.....+. -.|.++.- . +++++.|..-..+.++..+.... ....
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~--~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~ 247 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTL 247 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC--CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceee
Confidence 4535544 4567999999753211 111111122 23555553 3 35788888888998887765332 2233
Q ss_pred EecCCCcceeEEEEee-eCCeEEEeCCCCcEEEEecCC
Q 014962 267 IYCDPSQRLVADCVLM-DVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 267 varD~~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~~~ 303 (415)
+.....+.++.++.|- +...++.+..+|.+.+++.+.
T Consensus 248 ~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 3223446678888885 445777888899999998653
No 135
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.36 E-value=4.7 Score=37.87 Aligned_cols=113 Identities=8% Similarity=0.052 Sum_probs=71.5
Q ss_pred ecCCceEEEeee-CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccC
Q 014962 184 TWPGMVLAICPY-LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
.-.++|.+++-- .|.+|+.+ ....|.+|++... +.++....+......+.....+++|+.|..-..+.++... .
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~--~ 149 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG--TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL--G 149 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS--CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS--S
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc--C
Confidence 346788888744 35634433 3467999999762 3444434344444455555678899999988888776543 2
Q ss_pred CeEEEEe-cCCCcceeEEEEeeeC-----------CeEEEeCCCCcEEEEe
Q 014962 262 RKLEQIY-CDPSQRLVADCVLMDV-----------DTAVVSDRKGSIAVLS 300 (415)
Q Consensus 262 ~~L~~va-rD~~~~~vta~~~Ld~-----------d~~l~aD~~gNl~vl~ 300 (415)
....... ......++.++.+-.. ..++.+..+|.|.++.
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc
Confidence 2222222 2245567888887533 3578888899999887
No 136
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.31 E-value=4.5 Score=36.57 Aligned_cols=108 Identities=8% Similarity=0.080 Sum_probs=57.8
Q ss_pred ceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecCCcEEEEEEEccCCe
Q 014962 188 MVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCRDGILFYSYHEDARK 263 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~~~~ 263 (415)
.+.+|+-- +|+ |+++- +++|++|+... +.+...........+..|... .+.|+|+|....- +..|+.+...
T Consensus 122 ~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~~~~~~g~~ 196 (286)
T 1q7f_A 122 HPRGVTVDNKGR-IIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC-VKVFNYEGQY 196 (286)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE-EEEEETTCCE
T ss_pred CceEEEEeCCCC-EEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE-EEEEcCCCCE
Confidence 35555532 567 66653 46788888643 334332211111134555543 3468999875432 4667776666
Q ss_pred EEEEecCCCcceeEEEEeeeCCeEEEeCCCC--cEEEEe
Q 014962 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKG--SIAVLS 300 (415)
Q Consensus 264 L~~varD~~~~~vta~~~Ld~d~~l~aD~~g--Nl~vl~ 300 (415)
+..+..+....+..++.+-.++.++++|... .|.++.
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 6666654333445555443334666666543 466665
No 137
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.16 E-value=4.6 Score=42.45 Aligned_cols=196 Identities=15% Similarity=0.114 Sum_probs=113.1
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCe---EEEEEEEEEC-CeeEEEEeeecCCC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGET---GKSMELVRVG-HEQVLVVGTSLSSG 91 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~---~~si~~~~l~-~~~~lvVGT~~~~~ 91 (415)
.....++++|+.+.++++..+. .+++.|..+ .+.. ++ ++. -.++..+.|. +..+|++|+.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-------~V~iwd~~~--~l~~--l~-~~~~~~~~sv~svafSPDG~~LAsgs~---- 149 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-------NVSVFKDNK--MLTN--LD-SKGNLSSRTYHCFEWNPIESSIVVGNE---- 149 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-------CEEEEETTE--EEEE--CC-CSSCSTTTCEEEEEECSSSSCEEEEET----
T ss_pred CcEEEEEECCCCCEEEEEeCCC-------cEEEEeCCc--eeee--cc-CCCccccccEEEEEEcCCCCEEEEEcC----
Confidence 4567888999998888876443 488888544 4443 33 332 0123355554 5689999965
Q ss_pred CCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccc
Q 014962 92 PAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEE 171 (415)
Q Consensus 92 ~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 171 (415)
-|.|.+|++.. |. +.
T Consensus 150 ------------DGtVkIWd~~~---------------------------------------------------~~-l~- 164 (588)
T 2j04_A 150 ------------DGELQFFSIRK---------------------------------------------------NS-EN- 164 (588)
T ss_dssp ------------TSEEEEEECCC---------------------------------------------------CT-TT-
T ss_pred ------------CCEEEEEECCC---------------------------------------------------Cc-cc-
Confidence 57899999872 00 00
Q ss_pred cccceEEEEEEE-----ecCCceEEEeeeCCceEEE-EeCCeEEEEeeCCCCcc-ceeeeeeeccceEEEEEEEeCCEEE
Q 014962 172 TETWQLRLAYST-----TWPGMVLAICPYLDRYFLA-SAGNAFYVCGFPNDNPQ-RVRRFAVGRTRFMIMLLTAHFTRIA 244 (415)
Q Consensus 172 ~~~~~L~l~~~~-----~~~g~V~al~~~~g~yLl~-~vg~~l~v~~~~~~~~~-~L~~~a~~~~~~~i~sI~~~~n~Il 244 (415)
..++-++..- .-.+.|++++-..+. |++ +.++.+++|++...... .++.... .....|.++.-.+++|+
T Consensus 165 --~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~-~h~~~V~svaFsg~~LA 240 (588)
T 2j04_A 165 --TPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQN-ASRRKITDLKIVDYKVV 240 (588)
T ss_dssp --CCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEEC-CCSSCCCCEEEETTEEE
T ss_pred --cccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecc-cccCcEEEEEEECCEEE
Confidence 0121222221 124689999877666 554 45667999999763210 0111110 11234444444477877
Q ss_pred EeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC-C--eEEEeCCCCcEEEEec
Q 014962 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV-D--TAVVSDRKGSIAVLSC 301 (415)
Q Consensus 245 VGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~-d--~~l~aD~~gNl~vl~~ 301 (415)
++. .+.| .-|+...+++...-.. +...+..+.|.|. + .++.|+.+|- .+...
T Consensus 241 Sa~-~~tI--kLWd~~~~~~~~~~~g-h~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 241 LTC-PGYV--HKIDLKNYSISSLKTG-SLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEC-SSEE--EEEETTTTEEEEEECS-CCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred EEe-CCeE--EEEECCCCeEEEEEcC-CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 764 4656 4456666777444433 6667777777432 2 5888888888 44443
No 138
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.65 E-value=6.3 Score=36.49 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=43.4
Q ss_pred EEEeCCC--ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEee
Q 014962 10 RKFHLGG--TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGT 86 (415)
Q Consensus 10 ~~i~L~~--tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT 86 (415)
.+++.+. .++.+...|+.++++ +. ...|..+|+ +++.+..+.......+.++. .+.+..+++...
T Consensus 29 w~~~~~~~~~~~~~~~~pdG~ilv--s~-------~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~--~~~dG~~lv~~~ 95 (276)
T 3no2_A 29 WEYPLEKGWECNSVAATKAGEILF--SY-------SKGAKMITR-DGRELWNIAAPAGCEMQTAR--ILPDGNALVAWC 95 (276)
T ss_dssp EEEECCTTCCCCEEEECTTSCEEE--EC-------BSEEEEECT-TSCEEEEEECCTTCEEEEEE--ECTTSCEEEEEE
T ss_pred EEeCCCccCCCcCeEECCCCCEEE--eC-------CCCEEEECC-CCCEEEEEcCCCCccccccE--ECCCCCEEEEec
Confidence 4566654 689999999998776 21 235999999 89999999886443444332 234556666543
No 139
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.64 E-value=6.8 Score=36.85 Aligned_cols=169 Identities=17% Similarity=0.095 Sum_probs=99.4
Q ss_pred EEEEeCCCcc--CEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEee
Q 014962 9 VRKFHLGGTP--KKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGT 86 (415)
Q Consensus 9 i~~i~L~~tp--~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT 86 (415)
++++|-...+ +-|.|+ . +.+.+++... -.|.|+.+|+.|++++.++.+++.--...+... ++..++ .|
T Consensus 34 v~~~phd~~~ftqGL~~~-~-~~LyestG~~----g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~---g~~ly~-lt 103 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-N-GYFYESTGLN----GRSSIRKVDIESGKTLQQIELGKRYFGEGISDW---KDKIVG-LT 103 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-T-TEEEEEEEET----TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE---TTEEEE-EE
T ss_pred EEEecCCCCcccceEEEE-C-CEEEEECCCC----CCceEEEEECCCCcEEEEEecCCccceeEEEEe---CCEEEE-EE
Confidence 4667777777 778888 3 4555555433 258899999999999999998765333333332 333333 23
Q ss_pred ecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCC
Q 014962 87 SLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG 166 (415)
Q Consensus 87 ~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g 166 (415)
- ..+++++|+..
T Consensus 104 w---------------~~~~v~v~D~~----------------------------------------------------- 115 (262)
T 3nol_A 104 W---------------KNGLGFVWNIR----------------------------------------------------- 115 (262)
T ss_dssp S---------------SSSEEEEEETT-----------------------------------------------------
T ss_pred e---------------eCCEEEEEECc-----------------------------------------------------
Confidence 3 14566666654
Q ss_pred ccccccccceEEEEEEEecCCceEEEeeeCCceEEEEeCC-eEEEEeeCCCCccceeeeeeecc--c-eEEEEEEEeCCE
Q 014962 167 IKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGN-AFYVCGFPNDNPQRVRRFAVGRT--R-FMIMLLTAHFTR 242 (415)
Q Consensus 167 ~~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~~vg~-~l~v~~~~~~~~~~L~~~a~~~~--~-~~i~sI~~~~n~ 242 (415)
.++++.+-+..+--.+++.-.++ |+++-|. +|.+++... -+.++.....+. + ..+..+...+.+
T Consensus 116 ---------t~~~~~ti~~~~eG~glt~dg~~-L~~SdGs~~i~~iDp~T--~~v~~~I~V~~~g~~~~~lNELe~~~G~ 183 (262)
T 3nol_A 116 ---------NLRQVRSFNYDGEGWGLTHNDQY-LIMSDGTPVLRFLDPES--LTPVRTITVTAHGEELPELNELEWVDGE 183 (262)
T ss_dssp ---------TCCEEEEEECSSCCCCEEECSSC-EEECCSSSEEEEECTTT--CSEEEEEECEETTEECCCEEEEEEETTE
T ss_pred ---------cCcEEEEEECCCCceEEecCCCE-EEEECCCCeEEEEcCCC--CeEEEEEEeccCCccccccceeEEECCE
Confidence 23333333443333456644445 8887753 477777764 233443333221 1 134456666889
Q ss_pred EEEeecCCcEEEEEEEccCCeEEEEe
Q 014962 243 IAVGDCRDGILFYSYHEDARKLEQIY 268 (415)
Q Consensus 243 IlVGD~~~Sv~ll~y~~~~~~L~~va 268 (415)
|++..-+.. .+++.|+..++....-
T Consensus 184 lyan~w~~~-~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 184 IFANVWQTN-KIVRIDPETGKVTGII 208 (262)
T ss_dssp EEEEETTSS-EEEEECTTTCBEEEEE
T ss_pred EEEEEccCC-eEEEEECCCCcEEEEE
Confidence 998886554 5688888877664443
No 140
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.53 E-value=7.2 Score=36.85 Aligned_cols=162 Identities=11% Similarity=0.036 Sum_probs=93.1
Q ss_pred EEEEeCCCcc--CEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEee
Q 014962 9 VRKFHLGGTP--KKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGT 86 (415)
Q Consensus 9 i~~i~L~~tp--~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT 86 (415)
++.+|-...+ +-|.|+. +.+.+++... ..|+.+|+.|++++.++ +++.--...+.. .++..++ .|
T Consensus 46 v~~~phd~~~ftqGL~~~~--~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~---~g~~Ly~-lt 112 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFHQ--GHFFESTGHQ------GTLRQLSLESAQPVWME-RLGNIFAEGLAS---DGERLYQ-LT 112 (268)
T ss_dssp EEEEECCTTCCEEEEEEET--TEEEEEETTT------TEEEECCSSCSSCSEEE-ECTTCCEEEEEE---CSSCEEE-EE
T ss_pred EEEEcCCCccccceEEEEC--CEEEEEcCCC------CEEEEEECCCCcEEeEE-CCCCcceeEEEE---eCCEEEE-EE
Confidence 4666766655 6777764 4555554322 23999999999999988 776433333322 2333333 23
Q ss_pred ecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCC
Q 014962 87 SLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG 166 (415)
Q Consensus 87 ~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g 166 (415)
- ..+++++|+..
T Consensus 113 w---------------~~~~v~V~D~~----------------------------------------------------- 124 (268)
T 3nok_A 113 W---------------TEGLLFTWSGM----------------------------------------------------- 124 (268)
T ss_dssp S---------------SSCEEEEEETT-----------------------------------------------------
T ss_pred c---------------cCCEEEEEECC-----------------------------------------------------
Confidence 2 14566666554
Q ss_pred ccccccccceEEEEEEEecCCceEEEeeeCCceEEEEeC-CeEEEEeeCCCCccceeeeeeeccce---EEEEEEEeCCE
Q 014962 167 IKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAG-NAFYVCGFPNDNPQRVRRFAVGRTRF---MIMLLTAHFTR 242 (415)
Q Consensus 167 ~~~~~~~~~~L~l~~~~~~~g~V~al~~~~g~yLl~~vg-~~l~v~~~~~~~~~~L~~~a~~~~~~---~i~sI~~~~n~ 242 (415)
.++++.+-+..+.-.+|+.-.++ |+++-| ++|++++... -+.++.....+.+. .+..|...+.+
T Consensus 125 ---------Tl~~~~ti~~~~eGwGLt~Dg~~-L~vSdGs~~l~~iDp~T--~~v~~~I~V~~~g~~v~~lNeLe~~dG~ 192 (268)
T 3nok_A 125 ---------PPQRERTTRYSGEGWGLCYWNGK-LVRSDGGTMLTFHEPDG--FALVGAVQVKLRGQPVELINELECANGV 192 (268)
T ss_dssp ---------TTEEEEEEECSSCCCCEEEETTE-EEEECSSSEEEEECTTT--CCEEEEEECEETTEECCCEEEEEEETTE
T ss_pred ---------cCcEEEEEeCCCceeEEecCCCE-EEEECCCCEEEEEcCCC--CeEEEEEEeCCCCcccccccccEEeCCE
Confidence 23334444444444567755455 888764 4477777764 23344433333222 34566767888
Q ss_pred EEEeecCCcEEEEEEEccCCeE
Q 014962 243 IAVGDCRDGILFYSYHEDARKL 264 (415)
Q Consensus 243 IlVGD~~~Sv~ll~y~~~~~~L 264 (415)
|++..-... .+++.|+..++.
T Consensus 193 lyanvw~s~-~I~vIDp~TG~V 213 (268)
T 3nok_A 193 IYANIWHSS-DVLEIDPATGTV 213 (268)
T ss_dssp EEEEETTCS-EEEEECTTTCBE
T ss_pred EEEEECCCC-eEEEEeCCCCcE
Confidence 998885544 567778877654
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.32 E-value=7.1 Score=36.29 Aligned_cols=131 Identities=13% Similarity=0.085 Sum_probs=69.9
Q ss_pred eEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeee--cc--ceEEEEEEEeCCEEEEeec-CCcEEEEEEEcc
Q 014962 189 VLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVG--RT--RFMIMLLTAHFTRIAVGDC-RDGILFYSYHED 260 (415)
Q Consensus 189 V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~--~~--~~~i~sI~~~~n~IlVGD~-~~Sv~ll~y~~~ 260 (415)
+.+++-- .|+ |+++- +++|.+|++..++ .+...... .. ...-..+...++++++.+. -..+.++.++..
T Consensus 143 ~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g--~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 143 IHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAG--QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEEEECTTS--CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred ceEEEECCCCc-EEEEeCCCCEEEEEEECCCC--cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 5545422 467 65553 4579999998432 23322211 11 1122344556778888665 457788888876
Q ss_pred CCeEEEEec---CCCc----ceeEEEEeeeCC-eEEEeC-CCCcEEEEecCCCcCCCCCCCCccceeeeeec-CccccEE
Q 014962 261 ARKLEQIYC---DPSQ----RLVADCVLMDVD-TAVVSD-RKGSIAVLSCSDRLEDNASPECNLTPNCAYHM-GEIAVSI 330 (415)
Q Consensus 261 ~~~L~~var---D~~~----~~vta~~~Ld~d-~~l~aD-~~gNl~vl~~~~~~~~~~~~~~kL~~~~~fhl-Gd~Vt~~ 330 (415)
.+++..+.. .... .++.++.|-.++ .+++++ .++.|.+++++.. ..+.....+.. |..+..+
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--------g~~~~~~~~~~~~~~~~~~ 291 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--------GHLTLIQQISTEGDFPRDF 291 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--------GCEEEEEEEECSSSCCCEE
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--------CcEEEeEEEecCCCCcCeE
Confidence 666654432 1111 356666664333 444554 4677888887531 13444455544 4445554
No 142
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.21 E-value=7.3 Score=36.19 Aligned_cols=117 Identities=11% Similarity=0.034 Sum_probs=79.9
Q ss_pred ceEEEEEEEecCCc--eEEEeeeCCceEEEEeCC----eEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeec
Q 014962 175 WQLRLAYSTTWPGM--VLAICPYLDRYFLASAGN----AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDC 248 (415)
Q Consensus 175 ~~L~l~~~~~~~g~--V~al~~~~g~yLl~~vg~----~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~ 248 (415)
+..+++.+.+.+.. ...|.--.+. |..+.|. .|.++++.. .+.++.. ......+...|...+++|++.+-
T Consensus 7 ~~~~v~~~~phd~~~ftqGL~~~~~~-LyestG~~g~S~v~~vD~~t--gkv~~~~-~l~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 7 QGYRVVKRYPHDTTAFTEGLFYLRGH-LYESTGETGRSSVRKVDLET--GRILQRA-EVPPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp CCEEEEEEEECCTTCCEEEEEEETTE-EEEEECCTTSCEEEEEETTT--CCEEEEE-ECCTTCCEEEEEEETTEEEEEES
T ss_pred cceEEEEEcCCCCccccccEEEECCE-EEEECCCCCCceEEEEECCC--CCEEEEE-eCCCCcceeEEEEeCCEEEEEEe
Confidence 46777777776544 5577644455 9999887 799999986 3445553 33445566778888999999998
Q ss_pred CCcEEEEEEEccCCeEE-EEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 249 RDGILFYSYHEDARKLE-QIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 249 ~~Sv~ll~y~~~~~~L~-~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
..+. ++.||.+..++. .+.-. ..-|..+ -|.+.++++|..+.|+++.
T Consensus 83 ~~~~-v~v~D~~tl~~~~ti~~~-~~Gwglt---~dg~~L~vSdgs~~l~~iD 130 (243)
T 3mbr_X 83 RNHE-GFVYDLATLTPRARFRYP-GEGWALT---SDDSHLYMSDGTAVIRKLD 130 (243)
T ss_dssp SSSE-EEEEETTTTEEEEEEECS-SCCCEEE---ECSSCEEEECSSSEEEEEC
T ss_pred eCCE-EEEEECCcCcEEEEEeCC-CCceEEe---eCCCEEEEECCCCeEEEEe
Confidence 8776 567888765443 33333 2334443 2567899999988888776
No 143
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.92 E-value=6.6 Score=37.25 Aligned_cols=100 Identities=8% Similarity=-0.036 Sum_probs=49.7
Q ss_pred CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceE----EEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecC
Q 014962 196 LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFM----IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD 270 (415)
Q Consensus 196 ~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~----i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD 270 (415)
.|. |+++. +..|+.++.... +.+++. .... +.. .......++.|++|..-.. ++.|+...+++.-....
T Consensus 143 ~~~-v~v~~~~g~l~~~d~~tG-~~~W~~-~~~~-~~~~~~~~~~~~~~~~~v~~g~~~g~--l~~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 143 DGL-VLIHTSNGQLQALNEADG-AVKWTV-NLDM-PSLSLRGESAPTTAFGAAVVGGDNGR--VSAVLMEQGQMIWQQRI 216 (376)
T ss_dssp TTE-EEEECTTSEEEEEETTTC-CEEEEE-ECCC------CCCCCCEEETTEEEECCTTTE--EEEEETTTCCEEEEEEC
T ss_pred CCE-EEEEcCCCeEEEEECCCC-cEEEEE-eCCC-CceeecCCCCcEEECCEEEEEcCCCE--EEEEECCCCcEEEEEec
Confidence 555 66665 445777777532 122222 1111 110 1223334788888865443 46677766555433222
Q ss_pred CCcce---------eEEEEeeeCCeEEEeCCCCcEEEEec
Q 014962 271 PSQRL---------VADCVLMDVDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 271 ~~~~~---------vta~~~Ld~d~~l~aD~~gNl~vl~~ 301 (415)
..+.. +.+.-.++++.++++..+|.|+.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 217 SQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp CC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred ccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 21111 11222345667777777788888774
No 144
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.76 E-value=8.3 Score=35.86 Aligned_cols=93 Identities=18% Similarity=0.084 Sum_probs=54.9
Q ss_pred EeeeCCceEEEEeC--------CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC---cEEEEEEEc
Q 014962 192 ICPYLDRYFLASAG--------NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD---GILFYSYHE 259 (415)
Q Consensus 192 l~~~~g~yLl~~vg--------~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~---Sv~ll~y~~ 259 (415)
++.++|+ |.+.-| +.+.+|++.. ..+...+....+-.-.+..+.++.|+| |-... .-.+..|+.
T Consensus 144 ~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 144 VLSHMDL-VYVIGGKGSDRKCLNKMCVYDPKK---FEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp EEEETTE-EEEECCBCTTSCBCCCEEEEETTT---TEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEET
T ss_pred EEEECCE-EEEEeCCCCCCcccceEEEEeCCC---CeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEEC
Confidence 3446666 444333 3578888775 234443432222223334445666554 54322 235788999
Q ss_pred cCCeEEEEecCCCcceeEEEEeeeCCeEE
Q 014962 260 DARKLEQIYCDPSQRLVADCVLMDVDTAV 288 (415)
Q Consensus 260 ~~~~L~~varD~~~~~vta~~~Ld~d~~l 288 (415)
+.++-..++.-+.+|.-.++..+++.-++
T Consensus 220 ~~~~W~~~~~~p~~r~~~~~~~~~~~l~v 248 (315)
T 4asc_A 220 TDNKWAPFEAFPQERSSLSLVSLVGTLYA 248 (315)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred CCCeEEECCCCCCcccceeEEEECCEEEE
Confidence 99999999887888887777776655333
No 145
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.75 E-value=7.8 Score=35.57 Aligned_cols=96 Identities=8% Similarity=-0.039 Sum_probs=55.9
Q ss_pred EEeeeCCceEEEEeC-------CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC---cEEEEEEEc
Q 014962 191 AICPYLDRYFLASAG-------NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD---GILFYSYHE 259 (415)
Q Consensus 191 al~~~~g~yLl~~vg-------~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~---Sv~ll~y~~ 259 (415)
+++.++|+ |.+.-| +.+.+|++.. ..+...+....+..-.++.+.++.|++ |-... .-.+..|+.
T Consensus 154 ~~~~~~~~-iyv~GG~~~~~~~~~~~~~d~~~---~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 154 GLVVASGV-IYCLGGYDGLNILNSVEKYDPHT---GHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp EEEEETTE-EEEECCBCSSCBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred eEEEECCE-EEEECCCCCCcccceEEEEeCCC---CcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeC
Confidence 44455666 544322 5578888875 235443333222233344445666555 54321 234578999
Q ss_pred cCCeEEEEecCCCcceeEEEEeeeCCeEEEe
Q 014962 260 DARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290 (415)
Q Consensus 260 ~~~~L~~varD~~~~~vta~~~Ld~d~~l~a 290 (415)
+.++...++.-+.+|.-.++..+++.-++.+
T Consensus 230 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 260 (301)
T 2vpj_A 230 RTDSWTTVTSMTTPRCYVGATVLRGRLYAIA 260 (301)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCCcEEECCCCCCcccceeEEEECCEEEEEc
Confidence 9999999988888887766666655544443
No 146
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.54 E-value=8.3 Score=35.41 Aligned_cols=89 Identities=11% Similarity=0.010 Sum_probs=50.2
Q ss_pred EEeeeCCceEEEEeC-------CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC---cEEEEEEEc
Q 014962 191 AICPYLDRYFLASAG-------NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD---GILFYSYHE 259 (415)
Q Consensus 191 al~~~~g~yLl~~vg-------~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~---Sv~ll~y~~ 259 (415)
+++.++++ |++.-| +.+.+|++.. ..+...+....+-.-.++.+.++.|++ |.... .-.+..|+.
T Consensus 201 ~~~~~~~~-i~v~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 201 GVALLNDH-IYVVGGFDGTAHLSSVEAYNIRT---DSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp EEEEETTE-EEEECCBCSSSBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEET
T ss_pred eEEEECCE-EEEEeCCCCCcccceEEEEeCCC---CcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcC
Confidence 44456676 544332 4578888875 234443332222222233444666544 54321 245688999
Q ss_pred cCCeEEEEecCCCcceeEEEEeee
Q 014962 260 DARKLEQIYCDPSQRLVADCVLMD 283 (415)
Q Consensus 260 ~~~~L~~varD~~~~~vta~~~Ld 283 (415)
+.++-..+..-+.+|.-.++..++
T Consensus 277 ~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 277 IIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp TTTEEEEEEEEEEEEESCEEEEEE
T ss_pred CCCeEEEcCCCCcccccceEEEeC
Confidence 988888887766666665555553
No 147
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.43 E-value=8.3 Score=36.41 Aligned_cols=115 Identities=10% Similarity=0.012 Sum_probs=79.0
Q ss_pred eEEEEEEEecCCce--EEEeeeCCceEEEEeCC--eEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCc
Q 014962 176 QLRLAYSTTWPGMV--LAICPYLDRYFLASAGN--AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDG 251 (415)
Q Consensus 176 ~L~l~~~~~~~g~V--~al~~~~g~yLl~~vg~--~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~S 251 (415)
..+++.+.+..... ..|.--.+. |.++.|. +|.++++.. .+.++.. .....+...|...+++|++.+-..+
T Consensus 42 ~~~Vv~~~phd~~~ftqGL~~~~~~-Ly~stG~~g~v~~iD~~T--gkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 42 VAHIIREYPHATNAFTQGLVFHQGH-FFESTGHQGTLRQLSLES--AQPVWME--RLGNIFAEGLASDGERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEEEECCTTCCEEEEEEETTE-EEEEETTTTEEEECCSSC--SSCSEEE--ECTTCCEEEEEECSSCEEEEESSSC
T ss_pred ceEEEEEEcCCCccccceEEEECCE-EEEEcCCCCEEEEEECCC--CcEEeEE--CCCCcceeEEEEeCCEEEEEEccCC
Confidence 56777777765444 677644445 8899888 588888875 3455554 5556677778888999999988777
Q ss_pred EEEEEEEccCCeEE-EEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 252 ILFYSYHEDARKLE-QIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 252 v~ll~y~~~~~~L~-~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
. ++.||.+..++. .+.-... -|..+ -|...++++|..+.|+++.
T Consensus 117 ~-v~V~D~~Tl~~~~ti~~~~e-GwGLt---~Dg~~L~vSdGs~~l~~iD 161 (268)
T 3nok_A 117 L-LFTWSGMPPQRERTTRYSGE-GWGLC---YWNGKLVRSDGGTMLTFHE 161 (268)
T ss_dssp E-EEEEETTTTEEEEEEECSSC-CCCEE---EETTEEEEECSSSEEEEEC
T ss_pred E-EEEEECCcCcEEEEEeCCCc-eeEEe---cCCCEEEEECCCCEEEEEc
Confidence 6 677898765443 4433322 34444 3677899999877787776
No 148
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.17 E-value=15 Score=37.63 Aligned_cols=188 Identities=11% Similarity=0.066 Sum_probs=107.5
Q ss_pred ceeEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECC-eeEEEE
Q 014962 6 RLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGH-EQVLVV 84 (415)
Q Consensus 6 ~~~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~-~~~lvV 84 (415)
.+.+.+++.+..|+.++++|+.+.++++... ...|.++|..+++++..++....-+.-....+...+ .++++.
T Consensus 314 ~l~~~~i~~~~~~~~~~~spdg~~l~va~~~------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s 387 (543)
T 1nir_A 314 NLTVTSIGAAPFLHDGGWDSSHRYFMTAANN------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWST 387 (543)
T ss_dssp SCEEEEEECCSSCCCEEECTTSCEEEEEEGG------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEE
T ss_pred cceeEEeccCcCccCceECCCCCEEEEEecC------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEe
Confidence 3456688888899999999999987776532 346999999999998887753221110111122333 455553
Q ss_pred eeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCC
Q 014962 85 GTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASC 164 (415)
Q Consensus 85 GT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 164 (415)
+.. ..+.|.+|++... . .|+
T Consensus 388 ~~~---------------~d~~V~v~d~~~~---------------------------------~--------~~~---- 407 (543)
T 1nir_A 388 SHL---------------GDGSISLIGTDPK---------------------------------N--------HPQ---- 407 (543)
T ss_dssp EBS---------------SSSEEEEEECCTT---------------------------------T--------CTT----
T ss_pred ccC---------------CCceEEEEEeCCC---------------------------------C--------Cch----
Confidence 311 1356777777620 0 000
Q ss_pred CCccccccccceEEEEEEEecC-CceEEEee-eCCceEEEEe--------CCeEEEEeeCCCCccce-eee--ee----e
Q 014962 165 DGIKLEETETWQLRLAYSTTWP-GMVLAICP-YLDRYFLASA--------GNAFYVCGFPNDNPQRV-RRF--AV----G 227 (415)
Q Consensus 165 ~g~~~~~~~~~~L~l~~~~~~~-g~V~al~~-~~g~yLl~~v--------g~~l~v~~~~~~~~~~L-~~~--a~----~ 227 (415)
..++.+..-+.. +.+..|.- =+|++|.++. .+.|.||+.... +.+ ... +. .
T Consensus 408 ----------~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~--~~~~~~~~v~~~~~~~ 475 (543)
T 1nir_A 408 ----------YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL--DAKYQVLPIAEWADLG 475 (543)
T ss_dssp ----------TBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT--TSCCEEECHHHHHCCC
T ss_pred ----------hcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC--CCCeEEeechhhcccC
Confidence 123334444443 45555653 3567677765 458999999852 112 110 00 0
Q ss_pred ccceEEEEEE--EeCCEEEEeec----CCcEEEEEEEccCCeEEEEecCCC
Q 014962 228 RTRFMIMLLT--AHFTRIAVGDC----RDGILFYSYHEDARKLEQIYCDPS 272 (415)
Q Consensus 228 ~~~~~i~sI~--~~~n~IlVGD~----~~Sv~ll~y~~~~~~L~~varD~~ 272 (415)
..+-.+..+. ..|+.++++.- ..+ .+..||....++...-+|..
T Consensus 476 ~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~-~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 476 EGAKRVVQPEYNKRGDEVWFSVWNGKNDSS-ALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp SSCCEEEEEEECSSSSEEEEEEECCTTSCC-EEEEEETTTTEEEEEECCTT
T ss_pred CCCCceEeccCCCCCCEEEEEeecCCCCCC-eEEEEECCCceEEEeecCCC
Confidence 1122455554 36788887642 223 33448888888877777644
No 149
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=91.10 E-value=11 Score=35.83 Aligned_cols=125 Identities=12% Similarity=0.025 Sum_probs=67.6
Q ss_pred ceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccce---eeeeeeccc----e-------EEEE---EEEeCCEEEEee
Q 014962 188 MVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRV---RRFAVGRTR----F-------MIML---LTAHFTRIAVGD 247 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L---~~~a~~~~~----~-------~i~s---I~~~~n~IlVGD 247 (415)
.+.+++-- .|++|+++. ++.+.+|++...+.++. ......... . .+.. +...+.++++++
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 46666522 466565553 46899998864221211 111111110 0 2334 445678999988
Q ss_pred cCC------cEEEEEEEccCCeEEE----Ee-cCCCcceeEEEEee----eCCeEEEeCCC-CcEEEEecCCCcCCCCCC
Q 014962 248 CRD------GILFYSYHEDARKLEQ----IY-CDPSQRLVADCVLM----DVDTAVVSDRK-GSIAVLSCSDRLEDNASP 311 (415)
Q Consensus 248 ~~~------Sv~ll~y~~~~~~L~~----va-rD~~~~~vta~~~L----d~d~~l~aD~~-gNl~vl~~~~~~~~~~~~ 311 (415)
... ++.++..+. .+++.. +. ....++++ .+- |.+.+++++.+ +.+.+++.+.
T Consensus 274 ~~~~~~~~~~i~v~~~~~-~g~~~~~~~~~~~~~~~~~~~---a~sp~~~dg~~l~v~~~~~~~v~v~~~~~-------- 341 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRD-CGSIEKQLFLSPTPTSGGHSN---AVSPCPWSDEWMAITDDQEGWLEIYRWKD-------- 341 (365)
T ss_dssp EESSTTSCCEEEEEEECT-TSCEEEEEEEEECSSCCTTCC---CEEECTTCTTEEEEECSSSCEEEEEEEET--------
T ss_pred CCCCCCCCCeEEEEEECC-CCCEEEeeeeeecCCCCcccc---eecCCCcCCCEEEEEEcCCCeEEEEEEch--------
Confidence 644 687777764 455553 21 12234433 222 45677777764 7888888654
Q ss_pred CCccceeeeeecCc
Q 014962 312 ECNLTPNCAYHMGE 325 (415)
Q Consensus 312 ~~kL~~~~~fhlGd 325 (415)
..|...+.+.+++
T Consensus 342 -~~l~~~~~~~~~~ 354 (365)
T 1jof_A 342 -EFLHRVARVRIPE 354 (365)
T ss_dssp -TEEEEEEEEECCS
T ss_pred -hhCceeeEEEcCC
Confidence 1455555666665
No 150
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=91.04 E-value=7.7 Score=39.51 Aligned_cols=94 Identities=11% Similarity=0.089 Sum_probs=56.1
Q ss_pred eEEEEeCCCccCE----EEEecCCCEEEEEEEe--------eCCC----cceeeEEEEeCCCCcEEEEEeCCCCCeEEEE
Q 014962 8 NVRKFHLGGTPKK----VLYHSESRLLIVMRTE--------LNND----TCSSDICCVDPLSGSVLSSFKLELGETGKSM 71 (415)
Q Consensus 8 ~i~~i~L~~tp~~----I~y~~~~~~~~v~~~~--------~~~~----~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si 71 (415)
-+.+++.+..|.. +-|+|..+.+++...- .+.. .....|.++|..+++.+.++.+...+. . -
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~-~-P 253 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR-M-A 253 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE-E-E
T ss_pred EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC-c-c
Confidence 3567777766654 4459999966665311 0011 346789999999999999988863211 1 1
Q ss_pred EEEEE--C-CeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEE
Q 014962 72 ELVRV--G-HEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIE 113 (415)
Q Consensus 72 ~~~~l--~-~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~ 113 (415)
.-+.| . +..++.|+..... ..-.+.|.+|..+
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~----------~~Lss~V~v~~~d 288 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSL----------KDLSSSIWLWFYE 288 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEET----------TTCCEEEEEEEEE
T ss_pred ceeEeeECCCCCEEEEEEeeec----------cCCCceEEEEEec
Confidence 22334 3 4466666666322 1124677777665
No 151
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.92 E-value=5.2 Score=37.32 Aligned_cols=37 Identities=14% Similarity=0.340 Sum_probs=22.1
Q ss_pred cCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc
Q 014962 18 PKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS 55 (415)
Q Consensus 18 p~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~ 55 (415)
.+..+.. ..++|++.............+..+|+.+.+
T Consensus 102 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 138 (318)
T 2woz_A 102 LFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAK 138 (318)
T ss_dssp SCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTE
T ss_pred ccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCC
Confidence 3344444 345666666543334556789999997643
No 152
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.67 E-value=11 Score=35.20 Aligned_cols=118 Identities=6% Similarity=0.033 Sum_probs=67.8
Q ss_pred cCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCc--cceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEcc
Q 014962 185 WPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNP--QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~--~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
-.++|++++-- .|++|+.+. ...|++|++..... +.+.....+......+.....+++|+.|..-..+.++.....
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 45788888733 467455443 45699999953211 112222222222333333446789999998889988765543
Q ss_pred CCeEEEEecCCCcceeEEEEeeeC---CeEEEeCCCCcEEEEecCC
Q 014962 261 ARKLEQIYCDPSQRLVADCVLMDV---DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 261 ~~~L~~varD~~~~~vta~~~Ld~---d~~l~aD~~gNl~vl~~~~ 303 (415)
..+....- .....+|.++.|-.+ ..++.+..+|.+.+++...
T Consensus 186 ~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 186 DWECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CeeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 22222221 234557788887643 2577788889999988643
No 153
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=90.39 E-value=9.9 Score=35.74 Aligned_cols=117 Identities=9% Similarity=0.075 Sum_probs=79.5
Q ss_pred ceEEEEEEEecCCce--EEEeeeCCceEEEEeCC----eEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeec
Q 014962 175 WQLRLAYSTTWPGMV--LAICPYLDRYFLASAGN----AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDC 248 (415)
Q Consensus 175 ~~L~l~~~~~~~g~V--~al~~~~g~yLl~~vg~----~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~ 248 (415)
+..+++.+.+..... ..|.--+|. |..+.|. .|.++++.. .+.++.. ..+...+...|...+++|++.+-
T Consensus 29 ~~~~vv~~~phd~~~ftqGL~~~~~~-LyestG~~g~S~v~~vD~~T--gkv~~~~-~l~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 29 YDYQIVHSYPHDTKAFTEGFFYRNGY-FYESTGLNGRSSIRKVDIES--GKTLQQI-ELGKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp EEEEEEEEEECCTTCEEEEEEEETTE-EEEEEEETTEEEEEEECTTT--CCEEEEE-ECCTTCCEEEEEEETTEEEEEES
T ss_pred cceEEEEEecCCCCcccceEEEECCE-EEEECCCCCCceEEEEECCC--CcEEEEE-ecCCccceeEEEEeCCEEEEEEe
Confidence 567888877776554 667644555 8898876 799999986 3445553 33445577778888999999998
Q ss_pred CCcEEEEEEEccCCeE-EEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 249 RDGILFYSYHEDARKL-EQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 249 ~~Sv~ll~y~~~~~~L-~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
..+. ++.||.+..++ ..+.-.. .-|..+ -|.+.++.+|..+.|+++.
T Consensus 105 ~~~~-v~v~D~~t~~~~~ti~~~~-eG~glt---~dg~~L~~SdGs~~i~~iD 152 (262)
T 3nol_A 105 KNGL-GFVWNIRNLRQVRSFNYDG-EGWGLT---HNDQYLIMSDGTPVLRFLD 152 (262)
T ss_dssp SSSE-EEEEETTTCCEEEEEECSS-CCCCEE---ECSSCEEECCSSSEEEEEC
T ss_pred eCCE-EEEEECccCcEEEEEECCC-CceEEe---cCCCEEEEECCCCeEEEEc
Confidence 8776 66788876544 3444332 224333 2567889999877777665
No 154
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=90.27 E-value=7.4 Score=36.08 Aligned_cols=118 Identities=9% Similarity=0.021 Sum_probs=63.8
Q ss_pred ecCCceEEEeee---CCceEEEE-eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe--CCEEEEeecCCcEEEEEE
Q 014962 184 TWPGMVLAICPY---LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH--FTRIAVGDCRDGILFYSY 257 (415)
Q Consensus 184 ~~~g~V~al~~~---~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~--~n~IlVGD~~~Sv~ll~y 257 (415)
.-.++|++|+-. .|.+|+.+ ...+|.+|++.....+.+.....+......+..... +.+++.|..-..+.++.+
T Consensus 55 gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~ 134 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY 134 (316)
T ss_dssp CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE
T ss_pred CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec
Confidence 457889999832 36635443 346699999975211112221112222223333333 568999999899988876
Q ss_pred EccCCeEEE-EecCCCcceeEEEEeeeC------------------CeEEEeCCCCcEEEEecC
Q 014962 258 HEDARKLEQ-IYCDPSQRLVADCVLMDV------------------DTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 258 ~~~~~~L~~-varD~~~~~vta~~~Ld~------------------d~~l~aD~~gNl~vl~~~ 302 (415)
+... .... .-.......+.++.+-.+ ..++.+..+|.|.++...
T Consensus 135 ~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~ 197 (316)
T 3bg1_A 135 TGEG-QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEE 197 (316)
T ss_dssp CSSS-CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEEC
T ss_pred CCCC-CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeC
Confidence 5432 1111 111222334444444221 357777888888877754
No 155
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.18 E-value=11 Score=34.48 Aligned_cols=113 Identities=10% Similarity=0.066 Sum_probs=58.6
Q ss_pred CCceEEEe-eeCCceEEEEeCC----eEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecC-Cc-EEEEEEE
Q 014962 186 PGMVLAIC-PYLDRYFLASAGN----AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCR-DG-ILFYSYH 258 (415)
Q Consensus 186 ~g~V~al~-~~~g~yLl~~vg~----~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~-~S-v~ll~y~ 258 (415)
.++..+++ .-.|++|+++-+. .|.+|++.. .+.++..... ....-..+...++++++++.. .. +.++.++
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~--~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK--NKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT--TEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCC--CCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 44444233 2346657766555 799999875 2333332222 222344445566788888875 56 8777776
Q ss_pred ccCCeEEEEecC--CCcceeEEEEeeeCC-eEEEeC-CCCcEEEEecC
Q 014962 259 EDARKLEQIYCD--PSQRLVADCVLMDVD-TAVVSD-RKGSIAVLSCS 302 (415)
Q Consensus 259 ~~~~~L~~varD--~~~~~vta~~~Ld~d-~~l~aD-~~gNl~vl~~~ 302 (415)
... .+...... .......++.+-.++ .+++++ ..+.+.+++..
T Consensus 160 ~~g-~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 160 ADG-VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp TTC-CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCC-cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 432 22211100 112234444543333 355554 46678888753
No 156
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.99 E-value=20 Score=37.22 Aligned_cols=46 Identities=17% Similarity=0.050 Sum_probs=32.4
Q ss_pred CccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeC
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKL 62 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l 62 (415)
..+..++++|+++.++.+..... +.....|.++|..+++....+..
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~-~~~~~~i~~~d~~~g~~~~~~~~ 82 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDS-DRNQLDLWSYDIGSGQTRLLVDS 82 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSS-CTTEEEEEEEETTTCCEEEEECG
T ss_pred CCCCCceEecCCCEEEEEeccCC-CCcccEEEEEECCCCceeEccch
Confidence 35778999999998877764211 22356899999999886655544
No 157
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.79 E-value=3.1 Score=42.77 Aligned_cols=111 Identities=7% Similarity=0.156 Sum_probs=63.4
Q ss_pred cCCceEEEe-eeC--C-ceEEEE--eCCeEEEEeeCCCCccceeeeeee-c-cceEEEEEEEeCCEEEEeecCCcEEEEE
Q 014962 185 WPGMVLAIC-PYL--D-RYFLAS--AGNAFYVCGFPNDNPQRVRRFAVG-R-TRFMIMLLTAHFTRIAVGDCRDGILFYS 256 (415)
Q Consensus 185 ~~g~V~al~-~~~--g-~yLl~~--vg~~l~v~~~~~~~~~~L~~~a~~-~-~~~~i~sI~~~~n~IlVGD~~~Sv~ll~ 256 (415)
-.++|++|+ .+. | . ++++ ....|.+|++... +.+...... . .....+.....+..++.|+....|.++.
T Consensus 307 H~~~V~sv~~~~s~~g~~-~laS~S~D~tvklWD~~~~--~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd 383 (524)
T 2j04_B 307 HDSYILSVSTAYSDFEDT-VVSTVAVDGYFYIFNPKDI--ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVP 383 (524)
T ss_dssp SSSCEEEEEEECCTTSCC-EEEEEETTSEEEEECGGGH--HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEE
T ss_pred ccccEEEEEEEcCCCCCe-EEEEeccCCeEEEEECCCC--CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEE
Confidence 467899994 343 4 5 5554 3456999999752 222221111 1 1122334444567888888888776654
Q ss_pred EEccCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEec
Q 014962 257 YHEDARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 257 y~~~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~ 301 (415)
.+.. ..+..+.. ...+|+++.|-. ...++.+..+|.+.++..
T Consensus 384 ~~~~-~~~~~l~g--H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 384 SRAA-FAVHPLVS--RETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TTCT-TCCEEEEE--CSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred Cccc-ccceeeec--CCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 3321 12222322 455788888743 346778888898887663
No 158
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.74 E-value=10 Score=35.27 Aligned_cols=95 Identities=9% Similarity=-0.004 Sum_probs=55.7
Q ss_pred EEeeeCCceEEEEeC----------CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eec-C---CcEEEE
Q 014962 191 AICPYLDRYFLASAG----------NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDC-R---DGILFY 255 (415)
Q Consensus 191 al~~~~g~yLl~~vg----------~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~-~---~Sv~ll 255 (415)
+++.++++ |.+.-| +.+.+|++.. ..++..+....+..-.+..+.++.|+| |-. . ..-.+.
T Consensus 93 ~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~~d~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 168 (315)
T 4asc_A 93 GLGEALNS-IYVVGGREIKDGERCLDSVMCYDRLS---FKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMC 168 (315)
T ss_dssp EEEEETTE-EEEECCEESSTTCCBCCCEEEEETTT---TEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEE
T ss_pred eEEEECCE-EEEEeCCcCCCCCcccceEEEECCCC---CcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEE
Confidence 34455666 555444 3477888764 235444433222233334446666554 543 1 123458
Q ss_pred EEEccCCeEEEEecCCCcceeEEEEeeeCCeEEE
Q 014962 256 SYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVV 289 (415)
Q Consensus 256 ~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~ 289 (415)
.|+...++-..++.-+.+|.-.++..+++.-++.
T Consensus 169 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 202 (315)
T 4asc_A 169 VYDPKKFEWKELAPMQTARSLFGATVHDGRIIVA 202 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred EEeCCCCeEEECCCCCCchhceEEEEECCEEEEE
Confidence 8999999999998888888877777766654443
No 159
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.93 E-value=14 Score=34.10 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=49.9
Q ss_pred EEeeeCCceEEEEeC-------CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecC---CcEEEEEEEc
Q 014962 191 AICPYLDRYFLASAG-------NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCR---DGILFYSYHE 259 (415)
Q Consensus 191 al~~~~g~yLl~~vg-------~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~---~Sv~ll~y~~ 259 (415)
+++.++++ |++.-| +.+.+|++.. ..+........+-.-.++.+.++.|+| |-.. ..-.+..|+.
T Consensus 210 ~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 210 GVCVLHNC-IYAAGGYDGQDQLNSVERYDVET---ETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp EEEEETTE-EEEECCBCSSSBCCCEEEEETTT---TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEET
T ss_pred eEEEECCE-EEEEeCCCCCCccceEEEEeCCC---CcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcC
Confidence 34455676 444332 5588888875 234443322222222334445666555 5321 1235688999
Q ss_pred cCCeEEEEecCCCcceeEEEEe
Q 014962 260 DARKLEQIYCDPSQRLVADCVL 281 (415)
Q Consensus 260 ~~~~L~~varD~~~~~vta~~~ 281 (415)
+.++-..++.-+.+|.-.++..
T Consensus 286 ~~~~W~~~~~~p~~r~~~~~~~ 307 (308)
T 1zgk_A 286 DTDTWSEVTRMTSGRSGVGVAV 307 (308)
T ss_dssp TTTEEEEEEECSSCCBSCEEEE
T ss_pred CCCEEeecCCCCCCcccceeEe
Confidence 9999999888888876655543
No 160
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.66 E-value=15 Score=33.84 Aligned_cols=95 Identities=14% Similarity=0.007 Sum_probs=53.9
Q ss_pred EEeeeCCceEEEEeC--------CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC-------cEEE
Q 014962 191 AICPYLDRYFLASAG--------NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD-------GILF 254 (415)
Q Consensus 191 al~~~~g~yLl~~vg--------~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~-------Sv~l 254 (415)
+++.++|+ |++.-| +.+.+|++.. ..+...+....+..-.++.+.++.|+| |-... .-.+
T Consensus 96 ~~~~~~~~-iyv~GG~~~~~~~~~~~~~~d~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 96 AACAAEGK-IYTSGGSEVGNSALYLFECYDTRT---ESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp EEEEETTE-EEEECCBBTTBSCCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCE
T ss_pred eEEEECCE-EEEECCCCCCCcEeeeEEEEeCCC---CceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceE
Confidence 44456676 554433 3477888765 234443333222222333445666555 43211 2335
Q ss_pred EEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEE
Q 014962 255 YSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVV 289 (415)
Q Consensus 255 l~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~ 289 (415)
..|+.+.++-..++.-+.+|.-.++..+++.-++.
T Consensus 172 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 206 (306)
T 3ii7_A 172 EVYDPATETWTELCPMIEARKNHGLVFVKDKIFAV 206 (306)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred EEeCCCCCeEEECCCccchhhcceEEEECCEEEEE
Confidence 78899999999998777777766666665554444
No 161
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=88.63 E-value=12 Score=32.84 Aligned_cols=65 Identities=3% Similarity=-0.081 Sum_probs=39.0
Q ss_pred EeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCC-CcEEEEEeCCCCCeEEEEEEEEEC-CeeEEEEeee
Q 014962 12 FHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLS-GSVLSSFKLELGETGKSMELVRVG-HEQVLVVGTS 87 (415)
Q Consensus 12 i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t-~~~i~s~~l~~~E~~~si~~~~l~-~~~~lvVGT~ 87 (415)
......+..++++|+.+.+++.. ...|.++|..+ ++............+. .+.+. +..+|+++..
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~---~~~~spdg~~l~~~~~ 104 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFATICNN---DHGISPDGALYAISDK 104 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTCCCBCS---CCEECTTSSEEEEEEC
T ss_pred ccCCcceEeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEecccccccccc---ceEECCCCCEEEEEEe
Confidence 33455677889999988777653 13699999988 7655433322223333 23343 4567776653
No 162
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.54 E-value=13 Score=38.12 Aligned_cols=112 Identities=7% Similarity=-0.016 Sum_probs=62.9
Q ss_pred CCceEEEeeeCCceEEEEeC-CeEEEEeeCCCCccceeeeeeeccceEEEEEE----EeC-CEEEEeecCCcEEEEEEEc
Q 014962 186 PGMVLAICPYLDRYFLASAG-NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT----AHF-TRIAVGDCRDGILFYSYHE 259 (415)
Q Consensus 186 ~g~V~al~~~~g~yLl~~vg-~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~----~~~-n~IlVGD~~~Sv~ll~y~~ 259 (415)
.++|++++--.+.+|++|.. ..|.+|++.... ..+.....+.. .|.+|. ..+ ++++.|..-..+.++..+.
T Consensus 266 ~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~-~~~~~~~~H~~--~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 266 DSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPE-VPSFYDQVHDS--YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp TTCEEEEEESSSSEEEEEETTSEEEEEETTBCS-SCSEEEECSSS--CEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred CCCEEEEEecCCCeEEEEeCCCEEEEEECCCCC-CceEEeecccc--cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 57899887545554666544 669999997521 11222222322 466663 134 5677777777786664432
Q ss_pred cCCeEEEEecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEec
Q 014962 260 DARKLEQIYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 260 ~~~~L~~varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~ 301 (415)
........+.. ...++.++.|-. ...+++++.++.+.++..
T Consensus 343 ~~~~~~~~~~~-~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~ 384 (524)
T 2j04_B 343 IATTKTTVSRF-RGSNLVPVVYCPQIYSYIYSDGASSLRAVPS 384 (524)
T ss_dssp HHHHCEEEEEC-SCCSCCCEEEETTTTEEEEECSSSEEEEEET
T ss_pred CCccccccccc-ccCcccceEeCCCcCeEEEeCCCCcEEEEEC
Confidence 11111222221 112466677754 347888888888888874
No 163
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=88.46 E-value=12 Score=32.76 Aligned_cols=112 Identities=10% Similarity=-0.032 Sum_probs=66.5
Q ss_pred cCCceEEEeee-CCceEEEEeCCeEEEEeeCC-CCccceeeeeeec--cceEEEEEEEeCCEEEEeecC--CcEEEEEEE
Q 014962 185 WPGMVLAICPY-LDRYFLASAGNAFYVCGFPN-DNPQRVRRFAVGR--TRFMIMLLTAHFTRIAVGDCR--DGILFYSYH 258 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~vg~~l~v~~~~~-~~~~~L~~~a~~~--~~~~i~sI~~~~n~IlVGD~~--~Sv~ll~y~ 258 (415)
..+.|.+++-- .|++|+++....|++|++.. .. ........ .......+...+.+|+++... ....++.++
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~ 116 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPS---PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLP 116 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCS---CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEE
T ss_pred CCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCC---ceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEE
Confidence 37788887733 46768888888899999875 32 12111111 122234455567788887733 467778888
Q ss_pred ccCCeEEEEecCCCcceeEEEEeeeC-CeEE-EeCCCCcEEEEecC
Q 014962 259 EDARKLEQIYCDPSQRLVADCVLMDV-DTAV-VSDRKGSIAVLSCS 302 (415)
Q Consensus 259 ~~~~~L~~varD~~~~~vta~~~Ld~-d~~l-~aD~~gNl~vl~~~ 302 (415)
...++...+..... +.++.+-.+ ..++ .+..++.+.++.++
T Consensus 117 ~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 117 STGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp TTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCCCceEEeecCCC---ccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 77666666655432 555555433 3444 56667766666643
No 164
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=88.43 E-value=21 Score=35.34 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=40.9
Q ss_pred eEEEEeCCC--------ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCC
Q 014962 8 NVRKFHLGG--------TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLEL 64 (415)
Q Consensus 8 ~i~~i~L~~--------tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~ 64 (415)
.+++|+++. .|+.++++|+.+.+.|... .....|.+||..+++++.++.++.
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~-----~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF-----SPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-----SSSCEEEEEETTTTEEEEEEECCS
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-----CCCCeEEEEECCCCcEEEEEECCC
Confidence 357787753 7999999999998777632 123579999999999999998764
No 165
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=88.03 E-value=8.7 Score=38.10 Aligned_cols=104 Identities=14% Similarity=0.132 Sum_probs=59.3
Q ss_pred eEEEeeeCCceEEEEeCCeEEEEeeCCCC------ccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccC-
Q 014962 189 VLAICPYLDRYFLASAGNAFYVCGFPNDN------PQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDA- 261 (415)
Q Consensus 189 V~al~~~~g~yLl~~vg~~l~v~~~~~~~------~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~- 261 (415)
..++.+-.|. |++|-++.+++|+++.-. ............+. ++.|...++.++|| ..+ .+..|+-..
T Consensus 42 lLais~~~gl-l~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~--~~~-~l~v~dv~sl 116 (388)
T 1xip_A 42 NLDISNSKSL-FVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVS--TRN-ALYSLDLEEL 116 (388)
T ss_dssp CEEEETTTTE-EEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEE--ESS-EEEEEESSST
T ss_pred EEEEcCCCCE-EEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEE--cCC-cEEEEEchhh
Confidence 3444555666 778888999998875310 00011111222344 66666678899999 333 355565422
Q ss_pred ---CeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEecCC
Q 014962 262 ---RKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 262 ---~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~~~ 303 (415)
..+..+ ...+.++.++.. .++.+..+|.|+++.+..
T Consensus 117 ~~~~~~~~~-----~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 117 SEFRTVTSF-----EKPVFQLKNVNN-TLVILNSVNDLSALDLRT 155 (388)
T ss_dssp TCEEEEEEC-----SSCEEEEEECSS-EEEEEETTSEEEEEETTT
T ss_pred hccCcccee-----ecceeeEEecCC-CEEEEECCCCEEEEEccC
Confidence 112111 122556666654 488889999999999654
No 166
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=87.69 E-value=17 Score=33.37 Aligned_cols=81 Identities=11% Similarity=-0.067 Sum_probs=47.3
Q ss_pred CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC-----cEEEEEEEccCCeEEEEecCCCcceeEEE
Q 014962 206 NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD-----GILFYSYHEDARKLEQIYCDPSQRLVADC 279 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~-----Sv~ll~y~~~~~~L~~varD~~~~~vta~ 279 (415)
+.+.+|++.. ..+...+....+-.-.++.+.++.|++ |-... .-.+..|+...++-..++.-+.+|.-.++
T Consensus 124 ~~~~~~d~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 200 (302)
T 2xn4_A 124 SSVEAYNIKS---NEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGV 200 (302)
T ss_dssp EEEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred ceEEEEeCCC---CeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccE
Confidence 3577888765 235444433223233334445676655 42210 12357889999999998877778877666
Q ss_pred EeeeCCeEEE
Q 014962 280 VLMDVDTAVV 289 (415)
Q Consensus 280 ~~Ld~d~~l~ 289 (415)
..+++.-++.
T Consensus 201 ~~~~~~iyv~ 210 (302)
T 2xn4_A 201 GVLNNLLYAV 210 (302)
T ss_dssp EEETTEEEEE
T ss_pred EEECCEEEEE
Confidence 6665554444
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=87.67 E-value=16 Score=33.25 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=17.9
Q ss_pred eeEEEEeCCCCcEEEEEeCCC
Q 014962 44 SDICCVDPLSGSVLSSFKLEL 64 (415)
Q Consensus 44 s~i~l~d~~t~~~i~s~~l~~ 64 (415)
..|.++|..+++.+..+.+..
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~ 41 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPD 41 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSS
T ss_pred CeEEEEECCCCcEEEEEecCC
Confidence 469999999999998888765
No 168
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.47 E-value=16 Score=33.82 Aligned_cols=81 Identities=10% Similarity=-0.105 Sum_probs=46.6
Q ss_pred CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC---cEEEEEEEccCCeEEEEecCCCcceeEEEEe
Q 014962 206 NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD---GILFYSYHEDARKLEQIYCDPSQRLVADCVL 281 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~---Sv~ll~y~~~~~~L~~varD~~~~~vta~~~ 281 (415)
+.+.+|++.. ..+...+....+-.-.++.+.++.|++ |-... .-.+..|+.+.++-..+..-+.+|.-.++..
T Consensus 184 ~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 260 (308)
T 1zgk_A 184 NSAECYYPER---NEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV 260 (308)
T ss_dssp CCEEEEETTT---TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ceEEEEeCCC---CeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE
Confidence 4578888865 234443322222222233444666555 53321 2345889999999999987777777666666
Q ss_pred eeCCeEEE
Q 014962 282 MDVDTAVV 289 (415)
Q Consensus 282 Ld~d~~l~ 289 (415)
+++.-++.
T Consensus 261 ~~~~i~v~ 268 (308)
T 1zgk_A 261 HQGRIYVL 268 (308)
T ss_dssp ETTEEEEE
T ss_pred ECCEEEEE
Confidence 65443333
No 169
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.41 E-value=17 Score=33.30 Aligned_cols=82 Identities=11% Similarity=-0.034 Sum_probs=49.0
Q ss_pred CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC---cEEEEEEEccCCeEEEEecCCCcceeEEEEe
Q 014962 206 NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD---GILFYSYHEDARKLEQIYCDPSQRLVADCVL 281 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~---Sv~ll~y~~~~~~L~~varD~~~~~vta~~~ 281 (415)
+.+.+|++.. ..+...+....+..-.++.+.+++|++ |-... .-.+..|+.+.++-..++.-+.+|.-.++..
T Consensus 169 ~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 169 NSCEVYDPAT---ETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred ceEEEeCCCC---CeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 4477888875 235444433222233344445666555 43221 2235789999999999988888887777777
Q ss_pred eeCCeEEEe
Q 014962 282 MDVDTAVVS 290 (415)
Q Consensus 282 Ld~d~~l~a 290 (415)
+++.-++.+
T Consensus 246 ~~~~i~v~G 254 (306)
T 3ii7_A 246 VGSIVYVLA 254 (306)
T ss_dssp ETTEEEEEE
T ss_pred ECCEEEEEe
Confidence 655544443
No 170
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=86.52 E-value=15 Score=36.16 Aligned_cols=83 Identities=14% Similarity=0.050 Sum_probs=52.4
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCC--------cEEEEEeCCC--CCeEEEEEEEEEC-
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSG--------SVLSSFKLEL--GETGKSMELVRVG- 77 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~--------~~i~s~~l~~--~E~~~si~~~~l~- 77 (415)
..++++...++.++++|+.+.++|+..- +..-..|++.|..++ +.+..+.... ...+.++ .+.
T Consensus 86 ~~~~~~~~~v~~l~~spdg~~lav~~~s---gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v---~~~p 159 (434)
T 2oit_A 86 GLLVPMKFPIHHLALSCDNLTLSACMMS---SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDM---KWNP 159 (434)
T ss_dssp CEEECCSSCEEEEEECTTSCEEEEEEEE---TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEE---EECS
T ss_pred cccccCCCcccEEEEcCCCCEEEEEEec---cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEE---EECC
Confidence 3567888889999999999988875310 223457889886543 2333344332 2344443 443
Q ss_pred -CeeEEEEeeecCCCCCCCCCCCccccccEEEEEEEE
Q 014962 78 -HEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIE 113 (415)
Q Consensus 78 -~~~~lvVGT~~~~~~~~~~~~e~~~~~Gri~vf~i~ 113 (415)
+..+|+.|+. -|.|.+|++.
T Consensus 160 ~~~~~las~s~----------------Dg~v~iwD~~ 180 (434)
T 2oit_A 160 TVPSMVAVCLA----------------DGSIAVLQVT 180 (434)
T ss_dssp SCTTEEEEEET----------------TSCEEEEEES
T ss_pred CCCCEEEEEEC----------------CCeEEEEEcC
Confidence 2467777754 4678999887
No 171
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=86.47 E-value=35 Score=35.91 Aligned_cols=48 Identities=15% Similarity=0.241 Sum_probs=36.6
Q ss_pred CEEEEecCCCEEEEEEEee------------CCCcceeeEEEEeCCCCcEEEEEeCCCCC
Q 014962 19 KKVLYHSESRLLIVMRTEL------------NNDTCSSDICCVDPLSGSVLSSFKLELGE 66 (415)
Q Consensus 19 ~~I~y~~~~~~~~v~~~~~------------~~~~~~s~i~l~d~~t~~~i~s~~l~~~E 66 (415)
..++|+|+.+++++.+.+. ..+.+.++|..+|+.|++.+..+++.+++
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d 305 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD 305 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc
Confidence 3589999998888776443 22344567999999999999999987653
No 172
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=86.40 E-value=33 Score=35.53 Aligned_cols=47 Identities=21% Similarity=0.263 Sum_probs=36.0
Q ss_pred EEEEecCCCEEEEEEEeeC-----------------CCcceeeEEEEeCCCCcEEEEEeCCCCC
Q 014962 20 KVLYHSESRLLIVMRTELN-----------------NDTCSSDICCVDPLSGSVLSSFKLELGE 66 (415)
Q Consensus 20 ~I~y~~~~~~~~v~~~~~~-----------------~~~~~s~i~l~d~~t~~~i~s~~l~~~E 66 (415)
-.+|+|+.+++++.+.... ++.+.++|.-+|+.|++.+..+++.+++
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d 313 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPND 313 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTC
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCC
Confidence 3688999888888875321 2344578999999999999999987654
No 173
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=85.90 E-value=24 Score=33.32 Aligned_cols=91 Identities=11% Similarity=0.201 Sum_probs=52.9
Q ss_pred eEEEe--eeCCceEEEEe-C-C-----eEEEEeeCCCCccceeeee-ee---ccceEEEEEEE---eCCEEEEeecC-Cc
Q 014962 189 VLAIC--PYLDRYFLASA-G-N-----AFYVCGFPNDNPQRVRRFA-VG---RTRFMIMLLTA---HFTRIAVGDCR-DG 251 (415)
Q Consensus 189 V~al~--~~~g~yLl~~v-g-~-----~l~v~~~~~~~~~~L~~~a-~~---~~~~~i~sI~~---~~n~IlVGD~~-~S 251 (415)
+.+++ .=.|++|+++. + + .|.+|++..++ + +.... .. ........+.. .+++|++++.. ..
T Consensus 256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g-~-~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~ 333 (365)
T 1jof_A 256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG-S-IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGW 333 (365)
T ss_dssp EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS-C-EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCE
T ss_pred cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCC-C-EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCe
Confidence 55555 22467565543 3 3 79999996422 2 33211 11 11112334555 58899999875 68
Q ss_pred EEEEEEEccCCeEEEEe--cCCCcceeEEEEeee
Q 014962 252 ILFYSYHEDARKLEQIY--CDPSQRLVADCVLMD 283 (415)
Q Consensus 252 v~ll~y~~~~~~L~~va--rD~~~~~vta~~~Ld 283 (415)
|.++..+.+ .|..++ .=+.|.++..|.++|
T Consensus 334 v~v~~~~~~--~l~~~~~~~~~~p~~~~~~~~~~ 365 (365)
T 1jof_A 334 LEIYRWKDE--FLHRVARVRIPEPGFGMNAIWYD 365 (365)
T ss_dssp EEEEEEETT--EEEEEEEEECCSTTEEEEEEEEC
T ss_pred EEEEEEchh--hCceeeEEEcCCCcceeeeEecC
Confidence 888887764 565554 334566777777765
No 174
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.65 E-value=22 Score=32.85 Aligned_cols=80 Identities=13% Similarity=0.132 Sum_probs=46.5
Q ss_pred eEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC---cEEEEEEEccCCeEEEEecCCCcceeEEEEee
Q 014962 207 AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD---GILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282 (415)
Q Consensus 207 ~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~---Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L 282 (415)
.+.+|++.. ..+...+....+-.-.++.+.++.|+| |-... .-.+..|+.+.++-..++.-+.+|.-.++..+
T Consensus 176 ~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 252 (318)
T 2woz_A 176 RVFIYNPKK---GDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL 252 (318)
T ss_dssp CEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE
T ss_pred eEEEEcCCC---CEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE
Confidence 478888875 234443332222222333445665554 53221 23467899999999999887778776666666
Q ss_pred eCCeEEE
Q 014962 283 DVDTAVV 289 (415)
Q Consensus 283 d~d~~l~ 289 (415)
++.-++.
T Consensus 253 ~~~i~v~ 259 (318)
T 2woz_A 253 AGSLYAI 259 (318)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 5544333
No 175
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=85.55 E-value=5.8 Score=41.70 Aligned_cols=63 Identities=14% Similarity=0.070 Sum_probs=39.0
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc-------EEEEEeCCCCCeEEEEEEEEECCeeEEEEeee
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS-------VLSSFKLELGETGKSMELVRVGHEQVLVVGTS 87 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~-------~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~ 87 (415)
+.+.++++|+++.++++.-+ +.|++.|..++. .+.+++.....+...+..+.+..+. ++.|..
T Consensus 131 sv~svafSPDG~~LAsgs~D-------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~ 200 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNED-------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALS 200 (588)
T ss_dssp CEEEEEECSSSSCEEEEETT-------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEET
T ss_pred cEEEEEEcCCCCEEEEEcCC-------CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeC
Confidence 47789999999999888633 469999998875 3566553332122334444443333 555533
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=85.14 E-value=27 Score=33.29 Aligned_cols=55 Identities=11% Similarity=-0.023 Sum_probs=43.3
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeCC---CcceeeEEEEeCCCCcEEEEEeCCC
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELNN---DTCSSDICCVDPLSGSVLSSFKLEL 64 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~---~~~~s~i~l~d~~t~~~i~s~~l~~ 64 (415)
+.++|.+..| .|+++|+.+.++|+...... +.....|.++|..+++.+..+.+.+
T Consensus 44 ~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 44 LGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp EEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred EEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 5789999999 99999999988887643321 2345679999999999999888754
No 177
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=84.53 E-value=26 Score=36.09 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=35.0
Q ss_pred EEEEecCCCEEEEEEEeeC---------CCcceeeEEEEeCCCCcEEEEEeCCCCC
Q 014962 20 KVLYHSESRLLIVMRTELN---------NDTCSSDICCVDPLSGSVLSSFKLELGE 66 (415)
Q Consensus 20 ~I~y~~~~~~~~v~~~~~~---------~~~~~s~i~l~d~~t~~~i~s~~l~~~E 66 (415)
-++|+++.+++.+.+.... .+.+.++|..+|+.|++.+..+++.+++
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d 294 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD 294 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc
Confidence 4789998888777654321 2344567999999999999999987653
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=83.95 E-value=42 Score=34.63 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=41.5
Q ss_pred eEEEEeCCCccCEEEEe----cCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCC
Q 014962 8 NVRKFHLGGTPKKVLYH----SESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLE 63 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~----~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~ 63 (415)
.+.+|+.+..|+.|+++ |+.+.++|+. .+...|.++|..|++.+..+...
T Consensus 232 ~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n------~~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 232 TVAEIKIGSEARSIETSKMEGWEDKYAIAGA------YWPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEE------EETTEEEEEETTTCCEEEEEECC
T ss_pred EeEEEecCCCCceeEEccccCCCCCEEEEEE------ccCCeEEEEECCCCcEEEEEecc
Confidence 46789999999999999 6888887775 34467999999999999887764
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=83.86 E-value=26 Score=32.15 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=26.0
Q ss_pred eeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEE
Q 014962 43 SSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLV 83 (415)
Q Consensus 43 ~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lv 83 (415)
...|.++|+.|++.+.++.....+.+.++.. ..+..+++
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~--~pdG~ilv 52 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAA--TKAGEILF 52 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEE--CTTSCEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEE--CCCCCEEE
Confidence 3579999999999999998865444444332 23445555
No 180
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=83.72 E-value=26 Score=32.00 Aligned_cols=82 Identities=12% Similarity=-0.087 Sum_probs=47.4
Q ss_pred CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCC---cEEEEEEEccCCeEEEEecCCCcceeEEEEe
Q 014962 206 NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRD---GILFYSYHEDARKLEQIYCDPSQRLVADCVL 281 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~---Sv~ll~y~~~~~~L~~varD~~~~~vta~~~ 281 (415)
+.+.+|++.. ..+...+....+..-.++.+.++.|++ |-... .-.+..|+.+.++-..++.-+.+|.-.++..
T Consensus 173 ~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 249 (302)
T 2xn4_A 173 STVECYNATT---NEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA 249 (302)
T ss_dssp CCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred cEEEEEeCCC---CcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE
Confidence 3477888765 234443332222222344455666555 53321 2246889999999999988777777666666
Q ss_pred eeCCeEEEe
Q 014962 282 MDVDTAVVS 290 (415)
Q Consensus 282 Ld~d~~l~a 290 (415)
+++.-++.+
T Consensus 250 ~~~~i~v~G 258 (302)
T 2xn4_A 250 VNGLLYVVG 258 (302)
T ss_dssp ETTEEEEEC
T ss_pred ECCEEEEEC
Confidence 555444443
No 181
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=81.90 E-value=39 Score=32.72 Aligned_cols=112 Identities=11% Similarity=0.048 Sum_probs=64.8
Q ss_pred CCceEEEeee-CCceEEEEeC----CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEE-eecCCcEEEEEEEc
Q 014962 186 PGMVLAICPY-LDRYFLASAG----NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAV-GDCRDGILFYSYHE 259 (415)
Q Consensus 186 ~g~V~al~~~-~g~yLl~~vg----~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlV-GD~~~Sv~ll~y~~ 259 (415)
.+.|.+++-- .|++|+.+.. ..|++|++... + .+.................+.+|++ +..-....++.|+.
T Consensus 178 ~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg--~-~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 178 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG--A-VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC--C-EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC--c-EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEEC
Confidence 4677777633 4664554443 37999999752 2 2232333333444555567787774 44444556777888
Q ss_pred cCCeEEEEecCCCcceeEEEEeeeCC-eE-EEeCCCC--cEEEEecC
Q 014962 260 DARKLEQIYCDPSQRLVADCVLMDVD-TA-VVSDRKG--SIAVLSCS 302 (415)
Q Consensus 260 ~~~~L~~varD~~~~~vta~~~Ld~d-~~-l~aD~~g--Nl~vl~~~ 302 (415)
..+++..+... ...+.++.+-.++ .+ .+++++| .|+++...
T Consensus 255 ~~~~~~~l~~~--~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 255 ASGQIRQVTDG--RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp TTCCEEECCCC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCCEEeCcCC--CCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 77777665543 3467777775444 34 3455556 56666643
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=80.68 E-value=32 Score=30.99 Aligned_cols=104 Identities=10% Similarity=-0.054 Sum_probs=51.5
Q ss_pred ceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccce-eeeeeec-cceEEEEE--EEeCCEEEEeecCCcEEEEEEEccC
Q 014962 188 MVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRV-RRFAVGR-TRFMIMLL--TAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L-~~~a~~~-~~~~i~sI--~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
.+..++-- .|+.|++.. +++|++|++..++ .+ .....+. ....+..| +..| .|+|++ -.+ +.+|+++.
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g--~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~-~~~--v~~~~~~g 246 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARG--ETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA-GDG--VHVLTPDG 246 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSS--CEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE-TTE--EEEECTTS
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCC--cCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc-CCe--EEEECCCC
Confidence 34555532 466343333 3679999987432 23 1111111 11122233 3344 577877 444 57788875
Q ss_pred CeEEEEecCCCcceeEEEEeee-C-CeEEEeCCCCcEEEEec
Q 014962 262 RKLEQIYCDPSQRLVADCVLMD-V-DTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 262 ~~L~~varD~~~~~vta~~~Ld-~-d~~l~aD~~gNl~vl~~ 301 (415)
..+..+... .. ++++.|-. + +.+.++.. +.|+.++.
T Consensus 247 ~~~~~~~~~-~~--~~~~~f~~~d~~~L~v~t~-~~l~~~~~ 284 (296)
T 3e5z_A 247 DELGRVLTP-QT--TSNLCFGGPEGRTLYMTVS-TEFWSIET 284 (296)
T ss_dssp CEEEEEECS-SC--CCEEEEESTTSCEEEEEET-TEEEEEEC
T ss_pred CEEEEEECC-CC--ceeEEEECCCCCEEEEEcC-CeEEEEEc
Confidence 555555432 22 67777742 2 34555544 45666653
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=80.29 E-value=37 Score=31.47 Aligned_cols=57 Identities=21% Similarity=0.193 Sum_probs=35.0
Q ss_pred CccCEEEEecCCCEEEEEEEeeCC-----------------CcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEE
Q 014962 16 GTPKKVLYHSESRLLIVMRTELNN-----------------DTCSSDICCVDPLSGSVLSSFKLELGETGKSME 72 (415)
Q Consensus 16 ~tp~~I~y~~~~~~~~v~~~~~~~-----------------~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~ 72 (415)
..|.-|+.+|+.++|+.......- ......|.++|+.+++++..+.-.....+.+++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia 97 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLS 97 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEE
Confidence 368899999999888554433210 011247999999999887654422223455443
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=79.96 E-value=22 Score=35.14 Aligned_cols=57 Identities=11% Similarity=0.104 Sum_probs=44.2
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCC---CcceeeEEEEeCCCCcEEEEEeCCCC
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNN---DTCSSDICCVDPLSGSVLSSFKLELG 65 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~---~~~~s~i~l~d~~t~~~i~s~~l~~~ 65 (415)
-+.+||.+..|+ |+++|+.+.++|+.+.... +.....|.++|..|.+++..+.+..+
T Consensus 71 v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g 130 (386)
T 3sjl_D 71 VIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA 130 (386)
T ss_dssp EEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred EEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc
Confidence 367899999997 9999999988777542211 22346799999999999999988753
No 185
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=79.87 E-value=38 Score=31.37 Aligned_cols=126 Identities=12% Similarity=0.070 Sum_probs=65.8
Q ss_pred CCceEEEEe--CCeEEEEeeCCCCc----cceeee-----eeeccc--eEEEEEEEeCCEEEEeec-CCcEEEEEEEccC
Q 014962 196 LDRYFLASA--GNAFYVCGFPNDNP----QRVRRF-----AVGRTR--FMIMLLTAHFTRIAVGDC-RDGILFYSYHEDA 261 (415)
Q Consensus 196 ~g~yLl~~v--g~~l~v~~~~~~~~----~~L~~~-----a~~~~~--~~i~sI~~~~n~IlVGD~-~~Sv~ll~y~~~~ 261 (415)
.|++|+++- .+.+.+|++..... +.|... ...... ..-..+...+.++++++. -..+.++.++ .
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~--~ 242 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA--D 242 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE--T
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec--C
Confidence 466465553 46799999976421 102110 111111 223344456778999884 5567776665 4
Q ss_pred CeEEEEec---CCC-cceeEEEEeeeCC-eEEEeCCC--CcEEEEecCCCcCCCCCCCCccceeeeeecCccccEE
Q 014962 262 RKLEQIYC---DPS-QRLVADCVLMDVD-TAVVSDRK--GSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSI 330 (415)
Q Consensus 262 ~~L~~var---D~~-~~~vta~~~Ld~d-~~l~aD~~--gNl~vl~~~~~~~~~~~~~~kL~~~~~fhlGd~Vt~~ 330 (415)
+++..+.. ... .....++.+-.++ .++++++. +.+.+++++.. + .++.....+..|..+..+
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-----~--g~~~~~~~~~~g~~~~~~ 311 (361)
T 3scy_A 243 GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-----N--GTLTKVGYQLTGIHPRNF 311 (361)
T ss_dssp TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-----T--CCEEEEEEEECSSCCCEE
T ss_pred CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-----C--CcEEEeeEecCCCCCceE
Confidence 55543332 111 1234455553333 45566665 67888887641 1 245455555556666655
No 186
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=79.20 E-value=16 Score=37.77 Aligned_cols=94 Identities=9% Similarity=0.119 Sum_probs=49.2
Q ss_pred CeEEEEeeCCCCccceeeeeee-ccceEEEEEE--EeCCEEEEeecCC---cEEEEEEEccCC-eEEEEecCCCccee--
Q 014962 206 NAFYVCGFPNDNPQRVRRFAVG-RTRFMIMLLT--AHFTRIAVGDCRD---GILFYSYHEDAR-KLEQIYCDPSQRLV-- 276 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~a~~-~~~~~i~sI~--~~~n~IlVGD~~~---Sv~ll~y~~~~~-~L~~varD~~~~~v-- 276 (415)
..|++|++... ..+..... .....+.++. ..+++|+++..-+ ...++.|+...+ .+..+.......|+
T Consensus 235 ~~l~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 235 VTVGIYHLATG---KTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEETTTT---EEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eEEEEEECCCC---ceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 34777877642 22221111 1123444444 4677888865432 356777887776 66555544344443
Q ss_pred -EEEEeee--CC-eEEEeCCCCcEEEEecC
Q 014962 277 -ADCVLMD--VD-TAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 277 -ta~~~Ld--~d-~~l~aD~~gNl~vl~~~ 302 (415)
.++.|.. ++ .++.++++|.+.++.++
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 3445543 33 45566666665555543
No 187
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=79.17 E-value=34 Score=30.31 Aligned_cols=106 Identities=8% Similarity=-0.026 Sum_probs=53.2
Q ss_pred ceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecCCcEEEEEEEccCCe
Q 014962 188 MVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCRDGILFYSYHEDARK 263 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~~~~ 263 (415)
.+.+|+.- .|+ |.++. ++.|+.++... + +...........+..|... .+.++++|...+ .+++|+. .++
T Consensus 105 ~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g---~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i~~~~~-~g~ 177 (300)
T 2qc5_A 105 GPYGITEGLNGD-IWFTQLNGDRIGKLTADG---T-IYEYDLPNKGSYPAFITLGSDNALWFTENQNN-SIGRITN-TGK 177 (300)
T ss_dssp CEEEEEECSTTC-EEEEETTTTEEEEECTTS---C-EEEEECSSTTCCEEEEEECTTSSEEEEETTTT-EEEEECT-TCC
T ss_pred CCccceECCCCC-EEEEccCCCeEEEECCCC---C-EEEccCCCCCCCceeEEECCCCCEEEEecCCC-eEEEECC-CCc
Confidence 35555533 466 66654 56777777652 2 2221211112245555542 234888887543 2577777 555
Q ss_pred EEEEecCCCcceeEEEEeeeCCeEEEeCCCC-cEEEEe
Q 014962 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKG-SIAVLS 300 (415)
Q Consensus 264 L~~varD~~~~~vta~~~Ld~d~~l~aD~~g-Nl~vl~ 300 (415)
+..+..........++.+-.++.+.+++..+ .|+.+.
T Consensus 178 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 178 LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 5555433223344444432234555565543 366554
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=78.08 E-value=35 Score=29.91 Aligned_cols=100 Identities=7% Similarity=-0.003 Sum_probs=53.0
Q ss_pred CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCC-EEEEeecCC-cEEEEEEEccCCeEEEEecCC
Q 014962 196 LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFT-RIAVGDCRD-GILFYSYHEDARKLEQIYCDP 271 (415)
Q Consensus 196 ~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n-~IlVGD~~~-Sv~ll~y~~~~~~L~~varD~ 271 (415)
+|+ |.++- ++.|++|+.... .......... ..+..|....+ .|+++|... .| .+|+............
T Consensus 160 ~g~-l~v~~~~~~~i~~~~~~~~---~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v--~~~~~~~~~~~~~~~~- 231 (270)
T 1rwi_B 160 SGN-VYVTDTDNNRVVKLEAESN---NQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQV--VKLLAGSTTSTVLPFT- 231 (270)
T ss_dssp TCC-EEEEEGGGTEEEEECTTTC---CEEECCCSSC-CSEEEEEECTTCCEEEEETTTSCE--EEECTTCSCCEECCCC-
T ss_pred CCC-EEEEECCCCEEEEEecCCC---ceEeecccCC-CCceEEEECCCCCEEEEECCCCcE--EEEcCCCCcceeeccC-
Confidence 466 66654 467888887642 2222111111 23556665433 899999754 45 5677765544332221
Q ss_pred CcceeEEEEeeeCCeEEEeCC-CCcEEEEecCC
Q 014962 272 SQRLVADCVLMDVDTAVVSDR-KGSIAVLSCSD 303 (415)
Q Consensus 272 ~~~~vta~~~Ld~d~~l~aD~-~gNl~vl~~~~ 303 (415)
....+.++.+-.++.++++|. ++.|.++++++
T Consensus 232 ~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp SCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 123455555533345666665 55677777654
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=76.64 E-value=39 Score=30.83 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=65.7
Q ss_pred ecCCceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeeeec---cceEEEEEEEe-CCEEEEeecC---------
Q 014962 184 TWPGMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGR---TRFMIMLLTAH-FTRIAVGDCR--------- 249 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~---~~~~i~sI~~~-~n~IlVGD~~--------- 249 (415)
...+.+.+++.- +|+ |+++.+..|++|++.. ..++...... ....+..+... .+.+++|+..
T Consensus 51 ~~~~~~~~i~~~~dG~-l~v~~~~~l~~~d~~~---g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 51 TMDAPVSSVALRQSGG-YVATIGTKFCALNWKE---QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp ECSSCEEEEEEBTTSS-EEEEETTEEEEEETTT---TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred eCCCceEEEEECCCCC-EEEEECCeEEEEECCC---CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccccccc
Confidence 356778888755 567 8888899999999874 2233322211 12345666553 3458888853
Q ss_pred -CcEEEEEEEccCCeEEEEecCCCcceeEEEEee-eCCeEEEeCC-CCcEEEEecC
Q 014962 250 -DGILFYSYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAVVSDR-KGSIAVLSCS 302 (415)
Q Consensus 250 -~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L-d~d~~l~aD~-~gNl~vl~~~ 302 (415)
..-.+++++.+ +++..+..+.. ....+.+- |.+.++++|. .+.|+++.++
T Consensus 127 ~~~~~l~~~d~~-g~~~~~~~~~~--~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 127 RHQGALYSLFPD-HHVKKYFDQVD--ISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp TTCEEEEEECTT-SCEEEEEEEES--BEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEEECC-CCEEEEeeccc--cccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 34578888875 44544443321 22233332 2335666665 4568888764
No 190
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=76.47 E-value=51 Score=32.45 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=65.9
Q ss_pred EecCCceEEEeeeCCceEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCC
Q 014962 183 TTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDAR 262 (415)
Q Consensus 183 ~~~~g~V~al~~~~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~ 262 (415)
.++++ |++|+- .|.+|+++.+..|.+|+...-. .......+..+ +.++....+.+++++.-.++.++. -.++
T Consensus 85 ~~lp~-V~~l~f-d~~~L~v~~~~~l~v~dv~sl~--~~~~~~~~~~~--v~~i~~~~p~~av~~~dG~L~v~d--l~~~ 156 (388)
T 1xip_A 85 KEIPD-VIFVCF-HGDQVLVSTRNALYSLDLEELS--EFRTVTSFEKP--VFQLKNVNNTLVILNSVNDLSALD--LRTK 156 (388)
T ss_dssp EECTT-EEEEEE-ETTEEEEEESSEEEEEESSSTT--CEEEEEECSSC--EEEEEECSSEEEEEETTSEEEEEE--TTTC
T ss_pred eeCCC-eeEEEE-CCCEEEEEcCCcEEEEEchhhh--ccCccceeecc--eeeEEecCCCEEEEECCCCEEEEE--ccCC
Confidence 45778 999987 8888889999999999987521 11111222223 456776665577777777776554 4444
Q ss_pred eEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 263 KLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 263 ~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
++..++ -+|+|+..-..+ .+.+-.+|++.++.
T Consensus 157 ~~~~~~-----~~Vs~v~WSpkG-~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 157 STKQLA-----QNVTSFDVTNSQ-LAVLLKDRSFQSFA 188 (388)
T ss_dssp CEEEEE-----ESEEEEEECSSE-EEEEETTSCEEEEE
T ss_pred cccccc-----CCceEEEEcCCc-eEEEEcCCcEEEEc
Confidence 454432 256666653333 56666778888774
No 191
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=76.25 E-value=8.1 Score=37.89 Aligned_cols=55 Identities=7% Similarity=0.005 Sum_probs=45.4
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCC---CcceeeEEEEeCCCCcEEEEEeCC
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNN---DTCSSDICCVDPLSGSVLSSFKLE 63 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~---~~~~s~i~l~d~~t~~~i~s~~l~ 63 (415)
-+.+||++..| .|+++|+.+.+.|+.+.... ++....|.++|+.|++++.++.+.
T Consensus 58 v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 58 TLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp EEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEET
T ss_pred EEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECC
Confidence 36789999999 89999999988888754321 344678999999999999999876
No 192
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=74.53 E-value=52 Score=30.15 Aligned_cols=119 Identities=8% Similarity=0.043 Sum_probs=68.8
Q ss_pred eEEEEEEEecCCceEEEee-eCCceEEEE--eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecC-C
Q 014962 176 QLRLAYSTTWPGMVLAICP-YLDRYFLAS--AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCR-D 250 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~-~~g~yLl~~--vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~-~ 250 (415)
..+++...+.......++- -.|+ |.++ -+++|+.++... +.... +..+-.+..|... ++.++|+|.. .
T Consensus 21 ~~~~~~~~p~~~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g---~~~~~---~~~~~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 21 PAKIITSFPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPDG---NQQIH---ATVEGKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp CEEEEEEECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTC---CEEEE---EECSSEEEEEEECTTSCEEEEEECTT
T ss_pred CceEeEeCCCCCCcceEEECCCCC-EEEEeCCCCeEEEECCCC---ceEEE---EeCCCCceeEEEcCCCcEEEEeccCC
Confidence 4566666655555666653 2567 6665 356777776653 22222 1222245566543 2358888864 3
Q ss_pred cEEEEEEEccCCeEEEEecCCCcceeEEEEeeeCCeEEEeCC-CCcEEEEec
Q 014962 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR-KGSIAVLSC 301 (415)
Q Consensus 251 Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~d~~l~aD~-~gNl~vl~~ 301 (415)
+..+++|+...+++..++.-...+............++++|. .|+|+++..
T Consensus 94 ~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 94 SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 566788887788887776543333333333334446677884 788887774
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=74.42 E-value=44 Score=29.23 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=22.7
Q ss_pred eCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCc
Q 014962 13 HLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS 55 (415)
Q Consensus 13 ~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~ 55 (415)
.++..|+.|+++++.++|+++. .....|..+|+.+..
T Consensus 21 ~~~~~p~~i~~~~~g~l~v~~~------~~~~~i~~~~~~~~~ 57 (270)
T 1rwi_B 21 DFRLSPSGVAVDSAGNVYVTSE------GMYGRVVKLATGSTG 57 (270)
T ss_dssp SSCCCEEEEEECTTCCEEEEEC------SSSCEEEEECC----
T ss_pred cccCCccceEECCCCCEEEEcc------CCCCcEEEecCCCcc
Confidence 3444899999999988776342 123468888876654
No 194
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=74.34 E-value=78 Score=32.08 Aligned_cols=110 Identities=18% Similarity=0.224 Sum_probs=59.9
Q ss_pred CCeEEEEeeCCCCccceeeeeeeccceEEEEE----EEeCCEEEEeec-----C-CcEEEEEEEccCCeEEEE-----ec
Q 014962 205 GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL----TAHFTRIAVGDC-----R-DGILFYSYHEDARKLEQI-----YC 269 (415)
Q Consensus 205 g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI----~~~~n~IlVGD~-----~-~Sv~ll~y~~~~~~L~~v-----ar 269 (415)
+++|.+|++.. .+.+..............| ...+.+.+|+.. . ..|+++.|+. +++... +.
T Consensus 227 ~d~V~v~D~~~--~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~ 302 (462)
T 2ece_A 227 GNRIHFWDLRK--RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPA 302 (462)
T ss_dssp CCEEEEEETTT--TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECC
T ss_pred CCEEEEEECCC--CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCC
Confidence 79999999985 2333332221111334444 345778888875 4 4888888875 433222 22
Q ss_pred CC-C-------------cceeEEEEee-eCCeEEEeCC-CCcEEEEecCCCcCCCCCCCCccceeeeeecCcc
Q 014962 270 DP-S-------------QRLVADCVLM-DVDTAVVSDR-KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEI 326 (415)
Q Consensus 270 D~-~-------------~~~vta~~~L-d~d~~l~aD~-~gNl~vl~~~~~~~~~~~~~~kL~~~~~fhlGd~ 326 (415)
+. . ....+++.+- |+..+.++++ .+.|.+++... + .++...+...+|-.
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d-------~-~~~~lv~~I~tGG~ 367 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN-------P-FKPVLTGKVKLGGI 367 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS-------T-TSCEEEEEEECBTT
T ss_pred ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC-------C-CCcEEEEEEEeCCe
Confidence 10 0 1223333332 4446777777 44578887542 1 24556677777743
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=74.24 E-value=64 Score=31.02 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=42.6
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeC---CCcceeeEEEEeCCCCcEEEEEeCC
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELN---NDTCSSDICCVDPLSGSVLSSFKLE 63 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~---~~~~~s~i~l~d~~t~~~i~s~~l~ 63 (415)
+.+||.+..| .|+++|+.+.++|+.+... .+.....|.++|+.+++.+..+.+.
T Consensus 60 ~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~ 116 (373)
T 2mad_H 60 LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELP 116 (373)
T ss_pred EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECC
Confidence 5789999999 9999999998888754221 1233467999999999999988876
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=74.06 E-value=46 Score=29.33 Aligned_cols=105 Identities=12% Similarity=0.003 Sum_probs=60.8
Q ss_pred ceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecC-CcEEEEEEEccCC
Q 014962 188 MVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCR-DGILFYSYHEDAR 262 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~-~Sv~ll~y~~~~~ 262 (415)
.+.+|+-- .|+ |.++. ++.|.+|+... + +...........+..|... .+.|++++.. .++ .+|++ .+
T Consensus 184 ~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g---~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i--~~~d~-~g 255 (299)
T 2z2n_A 184 GPVGITKGNDDA-LWFVEIIGNKIGRITTSG---E-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKI--GRLTS-NN 255 (299)
T ss_dssp CEEEEEECTTSS-EEEEETTTTEEEEECTTC---C-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEE--EEEET-TT
T ss_pred cceeEEECCCCC-EEEEccCCceEEEECCCC---c-EEEEECCCCCCCceeEEECCCCCEEEeccCCceE--EEECC-CC
Confidence 35556543 366 77765 57788888721 2 3222211112245566553 3468999854 445 66777 45
Q ss_pred eEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEec
Q 014962 263 KLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 263 ~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~~ 301 (415)
++..+.-......+.++.+ .++.+.+++..+.|..+..
T Consensus 256 ~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~ 293 (299)
T 2z2n_A 256 IIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTL 293 (299)
T ss_dssp EEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEE
T ss_pred ceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEc
Confidence 6766643333345677777 7777777766677777763
No 197
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=73.86 E-value=51 Score=29.74 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=54.0
Q ss_pred eEEEee-eCCceEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCC-EEEEeecCCcEEEEEEEccCCeEEE
Q 014962 189 VLAICP-YLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFT-RIAVGDCRDGILFYSYHEDARKLEQ 266 (415)
Q Consensus 189 V~al~~-~~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n-~IlVGD~~~Sv~ll~y~~~~~~L~~ 266 (415)
+.++.. -+|. |.++. ..|+.++ .. + +.+...... ...+.++...++ .|++|+.-.++ +.|+++...+..
T Consensus 179 ~~~~~~d~~g~-l~v~t-~~l~~~d-~~-g-~~~~~~~~~--~~~~~~~~~~~~g~l~v~t~~~gl--~~~~~~g~~~~~ 249 (330)
T 3hxj_A 179 TSAASIGKDGT-IYFGS-DKVYAIN-PD-G-TEKWNFYAG--YWTVTRPAISEDGTIYVTSLDGHL--YAINPDGTEKWR 249 (330)
T ss_dssp CSCCEECTTCC-EEEES-SSEEEEC-TT-S-CEEEEECCS--SCCCSCCEECTTSCEEEEETTTEE--EEECTTSCEEEE
T ss_pred eeeeEEcCCCE-EEEEe-CEEEEEC-CC-C-cEEEEEccC--CcceeceEECCCCeEEEEcCCCeE--EEECCCCCEeEE
Confidence 444444 3566 77777 7888888 32 2 222221111 123444444444 89999876766 555766666655
Q ss_pred EecCCCcceeEEEEeee-CCeEEEeCCCCcEEEEe
Q 014962 267 IYCDPSQRLVADCVLMD-VDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 267 varD~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~ 300 (415)
....... ..+ ..++ ++.+.++..+|.|+.+.
T Consensus 250 ~~~~~~~--~~~-~~~~~~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 250 FKTGKRI--ESS-PVIGNTDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp EECSSCC--CSC-CEECTTSCEEEECTTCEEEEEC
T ss_pred eeCCCCc--ccc-ceEcCCCeEEEecCCCCEEEEC
Confidence 4433211 111 2234 45677777777777765
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=73.54 E-value=48 Score=29.24 Aligned_cols=107 Identities=7% Similarity=-0.012 Sum_probs=54.2
Q ss_pred ceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecCCcEEEEEEEccCCe
Q 014962 188 MVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCRDGILFYSYHEDARK 263 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~~~~ 263 (415)
.+.+|+.- +|+ |.++. ++.|++|+... + +...........+..|... ++.+++++...+ .+++|+. .++
T Consensus 100 ~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~g---~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~~~-~g~ 172 (299)
T 2z2n_A 100 APYGITEGPNGD-IWFTEMNGNRIGRITDDG---K-IREYELPNKGSYPSFITLGSDNALWFTENQNN-AIGRITE-SGD 172 (299)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEECTTC---C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTT-EEEEECT-TCC
T ss_pred CceeeEECCCCC-EEEEecCCceEEEECCCC---C-EEEecCCCCCCCCceEEEcCCCCEEEEeCCCC-EEEEEcC-CCc
Confidence 45566544 466 66664 56788887732 2 2222211112245566554 347888886533 2467777 566
Q ss_pred EEEEecCCCcceeEEEEeeeCCeEEEeCC-CCcEEEEec
Q 014962 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDR-KGSIAVLSC 301 (415)
Q Consensus 264 L~~varD~~~~~vta~~~Ld~d~~l~aD~-~gNl~vl~~ 301 (415)
+..+.-........++.+-.++.+.+++. .+.|+.+..
T Consensus 173 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 173 ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 65543222223344444422344555554 455665553
No 199
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=68.56 E-value=1.1e+02 Score=31.33 Aligned_cols=102 Identities=10% Similarity=0.072 Sum_probs=51.9
Q ss_pred CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceE-EEEEEEeCCEEEEeecCCc---EEEEEEEccCCeEEEEec
Q 014962 196 LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFM-IMLLTAHFTRIAVGDCRDG---ILFYSYHEDARKLEQIYC 269 (415)
Q Consensus 196 ~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~-i~sI~~~~n~IlVGD~~~S---v~ll~y~~~~~~L~~var 269 (415)
+|+ ++++. +..+.+|.+..++ +.++.......... +..+...+++|+++....+ ..++.++...+++..+..
T Consensus 322 dg~-~l~~~~~~g~~~l~~~~~~~-~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 399 (706)
T 2z3z_A 322 NNQ-FIWQSRRDGWNHLYLYDTTG-RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTP 399 (706)
T ss_dssp SSE-EEEEECTTSSCEEEEEETTS-CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCC
T ss_pred CCE-EEEEEccCCccEEEEEECCC-CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccC
Confidence 577 44433 2335566554322 33443332222221 2455556778877665553 778888877666665542
Q ss_pred CCCcceeEEEEeeeCC-eEEEe--CCC--CcEEEEecC
Q 014962 270 DPSQRLVADCVLMDVD-TAVVS--DRK--GSIAVLSCS 302 (415)
Q Consensus 270 D~~~~~vta~~~Ld~d-~~l~a--D~~--gNl~vl~~~ 302 (415)
...+.++.|-.+. .++.+ +.. +.+++++..
T Consensus 400 ---~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 400 ---ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp ---SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred ---CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 2335555554333 34332 222 457777643
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=68.04 E-value=67 Score=28.69 Aligned_cols=101 Identities=5% Similarity=-0.006 Sum_probs=51.7
Q ss_pred CceEEEEe--CCeEEEEeeCCCCccceeee-eeeccc----eEEEEEEEe-CCEEEEeecCCcEEEEEEEccCCeE-EEE
Q 014962 197 DRYFLASA--GNAFYVCGFPNDNPQRVRRF-AVGRTR----FMIMLLTAH-FTRIAVGDCRDGILFYSYHEDARKL-EQI 267 (415)
Q Consensus 197 g~yLl~~v--g~~l~v~~~~~~~~~~L~~~-a~~~~~----~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~~~~L-~~v 267 (415)
|++|.++- +++|++|++..++ + +... .+...+ ..+..|... .+.|++++...+ .+.+|+++.+++ ..+
T Consensus 187 g~~l~v~~~~~~~i~~~~~~~~g-~-~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~-~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 187 PYQLIVAETPTKKLWSYDIKGPA-K-IENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS-HIEVFGPDGGQPKMRI 263 (314)
T ss_dssp EEEEEEEETTTTEEEEEEEEETT-E-EEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT-EEEEECTTCBSCSEEE
T ss_pred CCEEEEEECCCCeEEEEECCCCC-c-cccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC-EEEEEcCCCCcEeEEE
Confidence 43365553 5679999876321 1 2110 111111 345555543 346888875443 347788774433 333
Q ss_pred ecCCCcceeEEEEeeeCCe-EEEe-CCCCcEEEEecC
Q 014962 268 YCDPSQRLVADCVLMDVDT-AVVS-DRKGSIAVLSCS 302 (415)
Q Consensus 268 arD~~~~~vta~~~Ld~d~-~l~a-D~~gNl~vl~~~ 302 (415)
. . ...+++++.+-.+.. +.++ ...+.|+.++..
T Consensus 264 ~-~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 264 R-C-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp E-C-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred e-C-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 2 2 125677777722223 4444 456778887753
No 201
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=67.15 E-value=81 Score=29.29 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=75.6
Q ss_pred ceEEEEEEEecCCc--eEEEeeeC-CceEEEEeC----CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEee
Q 014962 175 WQLRLAYSTTWPGM--VLAICPYL-DRYFLASAG----NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGD 247 (415)
Q Consensus 175 ~~L~l~~~~~~~g~--V~al~~~~-g~yLl~~vg----~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD 247 (415)
+..+.+.+.++.+. ...|.--. |+ |.++.| +.|.++++.. .+.++.... ....+...+...++++++++
T Consensus 7 ~~~~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~t--g~v~~~i~l-~~~~fgeGi~~~g~~lyv~t 82 (266)
T 2iwa_A 7 YIVEVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQT--GKVENIHKM-DDSYFGEGLTLLNEKLYQVV 82 (266)
T ss_dssp EEEEEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTT--CCEEEEEEC-CTTCCEEEEEEETTEEEEEE
T ss_pred cCceEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCC--CCEEEEEec-CCCcceEEEEEeCCEEEEEE
Confidence 47788888888765 45676444 55 888875 5899999985 244444332 22335556777799999999
Q ss_pred cCCcEEEEEEEccCCeE-EEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 248 CRDGILFYSYHEDARKL-EQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 248 ~~~Sv~ll~y~~~~~~L-~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
-..+. ++.|+....++ ..+.-.....|..+ . |...++++|..+.|+++.
T Consensus 83 ~~~~~-v~viD~~t~~v~~~i~~g~~~g~glt--~-Dg~~l~vs~gs~~l~viD 132 (266)
T 2iwa_A 83 WLKNI-GFIYDRRTLSNIKNFTHQMKDGWGLA--T-DGKILYGSDGTSILYEID 132 (266)
T ss_dssp TTCSE-EEEEETTTTEEEEEEECCSSSCCEEE--E-CSSSEEEECSSSEEEEEC
T ss_pred ecCCE-EEEEECCCCcEEEEEECCCCCeEEEE--E-CCCEEEEECCCCeEEEEE
Confidence 87776 55688776543 33322201223322 1 667888899777777776
No 202
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=66.86 E-value=77 Score=28.95 Aligned_cols=114 Identities=11% Similarity=0.131 Sum_probs=72.9
Q ss_pred ecCCceEEEeee-CCceEEEEe-CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccC
Q 014962 184 TWPGMVLAICPY-LDRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 184 ~~~g~V~al~~~-~g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
.-.++|.+++-- .|++|+.+. ...|.+|++.. .+.++....+......+.+...+++|+.|..-..+.++.. ..
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~--~~ 138 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT--GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI--KG 138 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET--TS
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC--CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC--CC
Confidence 456788887743 466455443 46699999976 2334443434444444444556789999998888877654 44
Q ss_pred CeEEEEecCCCcceeEEEEeeeC-------CeEEEeCCCCcEEEEecCC
Q 014962 262 RKLEQIYCDPSQRLVADCVLMDV-------DTAVVSDRKGSIAVLSCSD 303 (415)
Q Consensus 262 ~~L~~varD~~~~~vta~~~Ld~-------d~~l~aD~~gNl~vl~~~~ 303 (415)
..+..+- ....++.++.+... ..++.+..+|.+.++....
T Consensus 139 ~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 185 (319)
T 3frx_A 139 QCLATLL--GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185 (319)
T ss_dssp CEEEEEC--CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT
T ss_pred CeEEEEe--ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc
Confidence 4444433 24557777777532 2688888999999988643
No 203
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=66.26 E-value=73 Score=28.49 Aligned_cols=45 Identities=13% Similarity=0.010 Sum_probs=29.8
Q ss_pred EEEeCCC-ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeC
Q 014962 10 RKFHLGG-TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKL 62 (415)
Q Consensus 10 ~~i~L~~-tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l 62 (415)
+.+.-+. .|.-++|+|+.+.++++.. ....|..+|+.+. ...+..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~------~~~~i~~~~~~~~--~~~~~~ 66 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDV------RQNRTWAWSDDGQ--LSPEMH 66 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEG------GGTEEEEEETTSC--EEEEES
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeC------CCCEEEEEECCCC--eEEEEC
Confidence 4455444 7889999999984444432 2346899999887 455554
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=64.68 E-value=1.1e+02 Score=29.77 Aligned_cols=70 Identities=9% Similarity=-0.060 Sum_probs=36.4
Q ss_pred eeCCceEEEEeC-CeEEEEeeCCCCccceeeeee--e--cc---ceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEE
Q 014962 194 PYLDRYFLASAG-NAFYVCGFPNDNPQRVRRFAV--G--RT---RFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLE 265 (415)
Q Consensus 194 ~~~g~yLl~~vg-~~l~v~~~~~~~~~~L~~~a~--~--~~---~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~ 265 (415)
+-+|. |.++-. ++|+.|++... .+...+. . .. |+.-..+...++++++.|..... +++|+.+.. +.
T Consensus 228 p~~g~-lyv~d~~~~I~~~d~~~~---~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~-I~~~~~~g~-~~ 301 (409)
T 3hrp_A 228 ETEEW-LYFVDSNKNFGRFNVKTQ---EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS-VYKITPDGE-CE 301 (409)
T ss_dssp TTSSE-EEEECTTCEEEEEETTTC---CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE-EEEECTTCC-EE
T ss_pred CCCCe-EEEEECCCcEEEEECCCC---CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE-EEEEecCCC-EE
Confidence 33465 666543 45777777642 1222110 0 11 11133344446899999987663 677877654 44
Q ss_pred EEec
Q 014962 266 QIYC 269 (415)
Q Consensus 266 ~var 269 (415)
.++.
T Consensus 302 ~~~g 305 (409)
T 3hrp_A 302 WFCG 305 (409)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 205
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=63.27 E-value=74 Score=29.32 Aligned_cols=88 Identities=16% Similarity=0.108 Sum_probs=47.2
Q ss_pred eEEEEeeCCCCccceeeeeeeccce-EEEEEEE--eCCEEEEeecCCcEEEEEEEccCC--eEEEEec-------CCCcc
Q 014962 207 AFYVCGFPNDNPQRVRRFAVGRTRF-MIMLLTA--HFTRIAVGDCRDGILFYSYHEDAR--KLEQIYC-------DPSQR 274 (415)
Q Consensus 207 ~l~v~~~~~~~~~~L~~~a~~~~~~-~i~sI~~--~~n~IlVGD~~~Sv~ll~y~~~~~--~L~~var-------D~~~~ 274 (415)
+|++++... .+.++. +....+ .+..|.. .++ |+|+|....- +.+|+.+.. .+..++. +..-.
T Consensus 70 ~i~~~d~~~--g~~~~~--~~~~~~~~p~gia~d~~g~-l~v~d~~~~~-v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 70 TILVIDPNN--AEILQS--SGKNLFYLPHGLSIDTDGN-YWVTDVALHQ-VFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CEEEECTTT--CCEEEE--ECTTTCSSEEEEEECTTSC-EEEEETTTTE-EEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred cEEEEECCC--CeEEec--cCCCccCCceEEEECCCCC-EEEEECCCCE-EEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 477777753 233322 221111 2444444 444 8899986553 577887655 4555553 22233
Q ss_pred eeEEEEeee-CCeEEEeCC--CCcEEEEe
Q 014962 275 LVADCVLMD-VDTAVVSDR--KGSIAVLS 300 (415)
Q Consensus 275 ~vta~~~Ld-~d~~l~aD~--~gNl~vl~ 300 (415)
....+.+-. ++.++++|. .+.|.++.
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 455555543 567888885 45566555
No 206
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=61.88 E-value=1.6e+02 Score=30.90 Aligned_cols=108 Identities=10% Similarity=0.029 Sum_probs=61.8
Q ss_pred CCceEEEeeeC-CceEEEEe-CCeEEEEeeCCCCccceeeeee--eccceEEEEEEEe-CCEEEEeecCCcEEEEEEEcc
Q 014962 186 PGMVLAICPYL-DRYFLASA-GNAFYVCGFPNDNPQRVRRFAV--GRTRFMIMLLTAH-FTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 186 ~g~V~al~~~~-g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~--~~~~~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
...|.+|+.-. |. |.+|. ++.|..|+... ..++.... ....-.|.+|... ++.|.+|....++ ++|++.
T Consensus 362 ~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~---~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl--~~~~~~ 435 (781)
T 3v9f_A 362 NKVVSSVCDDGQGK-LWIGTDGGGINVFENGK---RVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNI--SYYNTR 435 (781)
T ss_dssp SSCEEEEEECTTSC-EEEEEBSSCEEEEETTE---EEEECC-----CCCSBEEEEEECTTSCEEEEETTEEE--EEECSS
T ss_pred CcceEEEEEcCCCC-EEEEeCCCcEEEEECCC---CeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCE--EEEcCC
Confidence 35689998765 67 88887 77788888753 22222100 0011246667654 6789999876776 777887
Q ss_pred CCeEEEEecC-CCcceeEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 261 ARKLEQIYCD-PSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 261 ~~~L~~varD-~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
.+++..+..+ .....+.++..-.++.+.++.. +.|+.+.
T Consensus 436 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~ 475 (781)
T 3v9f_A 436 LKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVID 475 (781)
T ss_dssp SCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEE
T ss_pred CCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEe
Confidence 7888776543 2233454443322334433333 4466555
No 207
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=60.09 E-value=1e+02 Score=28.14 Aligned_cols=100 Identities=8% Similarity=-0.024 Sum_probs=54.2
Q ss_pred CceEEEE--eCCeEEEEeeCCCCccceeeeeeeccceEEEEEEE--eCCEEEEeecCC---------cEEEEEEEccCCe
Q 014962 197 DRYFLAS--AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA--HFTRIAVGDCRD---------GILFYSYHEDARK 263 (415)
Q Consensus 197 g~yLl~~--vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~--~~n~IlVGD~~~---------Sv~ll~y~~~~~~ 263 (415)
|++|.++ .+++|++|++........+..+. .+- +..|.. .| .|+|++... .-.+++|+++...
T Consensus 196 g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~ 271 (322)
T 2fp8_A 196 SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEFGNI 271 (322)
T ss_dssp SSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTTSCE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCC-CEEEEecCcccccccCCCccEEEEECCCCCE
Confidence 4435555 34789999886421111222221 111 344444 34 488888651 4557899987555
Q ss_pred EEEEecCCC--cceeEEEEeeeCCeEEEeCCCCc-EEEEec
Q 014962 264 LEQIYCDPS--QRLVADCVLMDVDTAVVSDRKGS-IAVLSC 301 (415)
Q Consensus 264 L~~varD~~--~~~vta~~~Ld~d~~l~aD~~gN-l~vl~~ 301 (415)
+..+..... ..+++++.+ +++.+.+++...+ |.+++.
T Consensus 272 ~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 272 LEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred EEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 555543211 346666655 5667777776544 666654
No 208
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=59.61 E-value=1e+02 Score=27.89 Aligned_cols=48 Identities=8% Similarity=0.243 Sum_probs=30.7
Q ss_pred ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEE
Q 014962 17 TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSME 72 (415)
Q Consensus 17 tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~ 72 (415)
.|..++++|+.++|++.. ....|.++|+.+.+...-. ......+.++.
T Consensus 46 ~~~~~~~~~~g~l~~~~~-------~~~~i~~~d~~~~~~~~~~-~~~~~~~~~i~ 93 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDV-------FEGNIFKINPETKEIKRPF-VSHKANPAAIK 93 (333)
T ss_dssp CEEEEEECTTSCEEEEET-------TTCEEEEECTTTCCEEEEE-ECSSSSEEEEE
T ss_pred cccCcEECCCCCEEEEEC-------CCCEEEEEeCCCCcEEEEe-eCCCCCcceEE
Confidence 678899999888665432 2346899999887754422 23345555543
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=59.57 E-value=1e+02 Score=27.87 Aligned_cols=70 Identities=9% Similarity=0.124 Sum_probs=40.5
Q ss_pred EEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeec
Q 014962 10 RKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSL 88 (415)
Q Consensus 10 ~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~ 88 (415)
+.+.+...|..|+.+++.+++ |+. ...|.++|+.+++...-.....+.....+..+.+..+--+.+||..
T Consensus 48 ~~~~~~~~~~~i~~~~dG~l~-v~~--------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~ 117 (297)
T 3g4e_A 48 QRVTMDAPVSSVALRQSGGYV-ATI--------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMA 117 (297)
T ss_dssp EEEECSSCEEEEEEBTTSSEE-EEE--------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEE
T ss_pred EEEeCCCceEEEEECCCCCEE-EEE--------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCC
Confidence 456667788899999988843 433 1358899998876433333333322333444445433235567653
No 210
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=58.94 E-value=1.8e+02 Score=30.56 Aligned_cols=107 Identities=7% Similarity=0.074 Sum_probs=58.2
Q ss_pred CceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeeee-ccce-EEEEEEE-eCCEEEEeecCCcEEEEEEEccCC
Q 014962 187 GMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAVG-RTRF-MIMLLTA-HFTRIAVGDCRDGILFYSYHEDAR 262 (415)
Q Consensus 187 g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~-~~~~-~i~sI~~-~~n~IlVGD~~~Sv~ll~y~~~~~ 262 (415)
..|.+|..= +|+ |-++..+.|..|+...+ .++..... ..+. .|.+|.. .++.|.+|.- .++ ++|+...+
T Consensus 88 n~I~~i~~d~~g~-lWigT~~Gl~~yd~~~~---~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-~gl--~~~~~~~~ 160 (795)
T 4a2l_A 88 DISRIVKTDSQGR-VWIGTRDGLSRYDEEKD---IFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-EGL--IMFDIKES 160 (795)
T ss_dssp SCEEEEEECTTSC-EEEEESSCEEEEETTTT---EEEEECCEETTEECCCCEEEEEETTEEEEEET-TEE--EEEETTTT
T ss_pred cceeEEEECCCCC-EEEEeCCchheeCCCCC---eEEeccccccCCCceEEEEEECCCCCEEEEEC-Cce--EEEECCCC
Confidence 446777644 466 88998888999987642 23221111 0010 1555644 4678888876 665 77888777
Q ss_pred eEEEEecCCCcce-eEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 263 KLEQIYCDPSQRL-VADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 263 ~L~~varD~~~~~-vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
++..+........ +.++..-.++.+.++...+.|+.+.
T Consensus 161 ~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~ 199 (795)
T 4a2l_A 161 KFIDDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYS 199 (795)
T ss_dssp EEECSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEE
T ss_pred EEEeccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEe
Confidence 7765533211112 4444433344444444333466554
No 211
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=57.96 E-value=40 Score=32.00 Aligned_cols=54 Identities=9% Similarity=0.128 Sum_probs=40.8
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCC--cEEEEEeCCCCCeEEEE
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSG--SVLSSFKLELGETGKSM 71 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~--~~i~s~~l~~~E~~~si 71 (415)
.+++++++. |+.|+++|+.+.++++. + ..|.++|..|+ +.+.++ ...++.+..+
T Consensus 298 ~v~~i~~~~-p~~ia~spdg~~l~v~n-------~-~~v~v~D~~t~~l~~~~~i-~~~G~~P~~~ 353 (361)
T 2oiz_A 298 RVARIPGRD-ALSMTIDQQRNLMLTLD-------G-GNVNVYDISQPEPKLLRTI-EGAAEASLQV 353 (361)
T ss_dssp EEEEEECTT-CCEEEEETTTTEEEEEC-------S-SCEEEEECSSSSCEEEEEE-TTSCSSEEEE
T ss_pred EEEEEecCC-eeEEEECCCCCEEEEeC-------C-CeEEEEECCCCcceeeEEe-ccCCCCcEEE
Confidence 467899999 99999999999666543 1 57999999999 888765 2335555544
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=57.76 E-value=16 Score=36.58 Aligned_cols=55 Identities=11% Similarity=0.108 Sum_probs=43.9
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeC---CCcceeeEEEEeCCCCcEEEEEeCC
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELN---NDTCSSDICCVDPLSGSVLSSFKLE 63 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~---~~~~~s~i~l~d~~t~~~i~s~~l~ 63 (415)
-+.+||++..| .|+++|+.+.++|+.+... .++....|.+||+.|++++..+.+.
T Consensus 111 vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 111 ILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred EEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC
Confidence 36789999999 9999999998888864321 1233568999999999999998875
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=57.46 E-value=1e+02 Score=27.44 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=42.9
Q ss_pred eCCeEEEEeeCCCCccceeeeeee---ccceEEEEEEEe-C-CEEEEeecCCcEEEEEEEccCCeEEEE-ecCCCc---c
Q 014962 204 AGNAFYVCGFPNDNPQRVRRFAVG---RTRFMIMLLTAH-F-TRIAVGDCRDGILFYSYHEDARKLEQI-YCDPSQ---R 274 (415)
Q Consensus 204 vg~~l~v~~~~~~~~~~L~~~a~~---~~~~~i~sI~~~-~-n~IlVGD~~~Sv~ll~y~~~~~~L~~v-arD~~~---~ 274 (415)
-++.|++|+... ..++..... ...-.+..|... . +.+++++...+ +++|+.+ +++..+ ...... .
T Consensus 44 ~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~--l~~~d~~-g~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 44 PAGEILRIDLKT---GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLG--LLVVQTD-GTFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp ECCEEEEECTTT---CCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTE--EEEEETT-SCEEECCSBCTTSCBCB
T ss_pred CCCEEEEEeCCC---CcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCC--EEEEeCC-CCEEEEEeccCCCcccc
Confidence 456788887654 223322210 011135555543 3 68999998665 5678887 777666 432211 2
Q ss_pred eeEEEEeeeCCeEEEeCC
Q 014962 275 LVADCVLMDVDTAVVSDR 292 (415)
Q Consensus 275 ~vta~~~Ld~d~~l~aD~ 292 (415)
.+.++.+-.++.+.+++.
T Consensus 118 ~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp CCCEEEECTTSCEEEEEC
T ss_pred CCcCEEECCCCCEEEEec
Confidence 344444433334555544
No 214
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=56.79 E-value=1.2e+02 Score=29.50 Aligned_cols=117 Identities=11% Similarity=-0.004 Sum_probs=68.4
Q ss_pred EecCCceEEEeee-CCceEEE---Ee--CCeEEEEeeCCC-----Cc-cceeeeeeec-cceEEEEEEE--e-CCEEEEe
Q 014962 183 TTWPGMVLAICPY-LDRYFLA---SA--GNAFYVCGFPND-----NP-QRVRRFAVGR-TRFMIMLLTA--H-FTRIAVG 246 (415)
Q Consensus 183 ~~~~g~V~al~~~-~g~yLl~---~v--g~~l~v~~~~~~-----~~-~~L~~~a~~~-~~~~i~sI~~--~-~n~IlVG 246 (415)
....++|++|+-- .|++|++ +. .+.|.+|++... .. +.+....... ..-.|.+|.- . +++++.|
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 3457889998833 4664543 22 345899988631 00 1111112111 1223555554 3 6788889
Q ss_pred ecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEee-eCCeEEEeCCCCcEEEEecC
Q 014962 247 DCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 247 D~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~L-d~d~~l~aD~~gNl~vl~~~ 302 (415)
..-..|.++..+.. ... .........++++.+- +...++++..+|.|.++...
T Consensus 169 s~Dg~v~iwD~~~~--~~~-~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 169 LADGSIAVLQVTET--VKV-CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp ETTSCEEEEEESSS--EEE-EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ECCCeEEEEEcCCC--cce-eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 88888877766543 222 2222245578888875 44578888999999998754
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=56.28 E-value=9.7 Score=37.32 Aligned_cols=57 Identities=12% Similarity=0.053 Sum_probs=43.2
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEE
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGK 69 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~ 69 (415)
-+++||++.-|..|+++|+.+.+++.... ....|.++|..|++++.++.....-..+
T Consensus 306 vv~~i~vg~~p~gi~~s~Dg~~l~va~~~-----~~~~VsVID~~t~kvv~~I~vg~~P~~i 362 (368)
T 1mda_H 306 TSGPISNGHDSDAIIAAQDGASDNYANSA-----GTEVLDIYDAASDQDQSSVELDKGPESL 362 (368)
T ss_dssp EEECCEEEEEECEEEECCSSSCEEEEEET-----TTTEEEEEESSSCEEEEECCCCSCCCEE
T ss_pred EEEEEECCCCcceEEECCCCCEEEEEccC-----CCCeEEEEECCCCcEEEEEECCCCCCEE
Confidence 47889999999999999998865555420 1356999999999999987765544433
No 216
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=55.37 E-value=1.2e+02 Score=27.53 Aligned_cols=54 Identities=7% Similarity=0.131 Sum_probs=35.1
Q ss_pred eEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEE
Q 014962 8 NVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSM 71 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si 71 (415)
-+..+|++..|.-++++++.++|++-. ....|..+|+.+ .....+.+. ..+.++
T Consensus 24 ~~~~~p~~~~pegia~~~~g~lyv~d~-------~~~~I~~~d~~g-~~~~~~~~~--~~p~gi 77 (306)
T 2p4o_A 24 IITSFPVNTFLENLASAPDGTIFVTNH-------EVGEIVSITPDG-NQQIHATVE--GKVSGL 77 (306)
T ss_dssp EEEEECTTCCEEEEEECTTSCEEEEET-------TTTEEEEECTTC-CEEEEEECS--SEEEEE
T ss_pred EeEeCCCCCCcceEEECCCCCEEEEeC-------CCCeEEEECCCC-ceEEEEeCC--CCceeE
Confidence 456789999999999999887665531 234588889875 333333432 344444
No 217
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=53.72 E-value=2e+02 Score=29.45 Aligned_cols=20 Identities=5% Similarity=0.099 Sum_probs=16.0
Q ss_pred cCEEEEecCCCEEEEEEEee
Q 014962 18 PKKVLYHSESRLLIVMRTEL 37 (415)
Q Consensus 18 p~~I~y~~~~~~~~v~~~~~ 37 (415)
++.++++|+++.++++..+.
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCSEEECTTSSCEEEEEEEC
T ss_pred ccceEECCCCCEEEEEEEcC
Confidence 47799999999888876553
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=52.71 E-value=41 Score=32.41 Aligned_cols=47 Identities=11% Similarity=0.028 Sum_probs=36.7
Q ss_pred EEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEE
Q 014962 9 VRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60 (415)
Q Consensus 9 i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~ 60 (415)
+++||++..|..|+++|+.+.+++++.. ....|.++|..|++++.++
T Consensus 311 v~~i~~g~~p~~i~~s~Dg~~~l~v~~~-----~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 311 SSQISLGHDVDAISVAQDGGPDLYALSA-----GTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEEEECCCCcCeEEECCCCCeEEEEEcC-----CCCeEEEEECCCCCEEeee
Confidence 4899999999999999999943344321 1257999999999998873
No 219
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=52.06 E-value=2.2e+02 Score=29.55 Aligned_cols=68 Identities=18% Similarity=0.296 Sum_probs=44.1
Q ss_pred EEEEecCCCEEEEEEEeeC------------CCcceeeEEEEeCCCCcEEEEEeCCCCC-------eEEEEEEEEECCe-
Q 014962 20 KVLYHSESRLLIVMRTELN------------NDTCSSDICCVDPLSGSVLSSFKLELGE-------TGKSMELVRVGHE- 79 (415)
Q Consensus 20 ~I~y~~~~~~~~v~~~~~~------------~~~~~s~i~l~d~~t~~~i~s~~l~~~E-------~~~si~~~~l~~~- 79 (415)
-++|+|+.+++++.+.+.. .+.+.++|.-+|+.|++.+..++..++. ....+..+.+.++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 3799999888877764431 2334567999999999999999986543 1112223334543
Q ss_pred -eEEEEeee
Q 014962 80 -QVLVVGTS 87 (415)
Q Consensus 80 -~~lvVGT~ 87 (415)
.+|++++.
T Consensus 314 ~~~v~~~~~ 322 (668)
T 1kv9_A 314 RKVLMQAPK 322 (668)
T ss_dssp EEEEEECCT
T ss_pred EEEEEEECC
Confidence 46776643
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=50.47 E-value=1.3e+02 Score=26.30 Aligned_cols=73 Identities=4% Similarity=-0.089 Sum_probs=39.1
Q ss_pred ceEEEeee-CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEe-CCEEEEeecCCcEEEEEEEccCCe
Q 014962 188 MVLAICPY-LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH-FTRIAVGDCRDGILFYSYHEDARK 263 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~-~n~IlVGD~~~Sv~ll~y~~~~~~ 263 (415)
.+.+|+.- .|+ |.++. ++.|+.|+... + +...........+..|... .+.|++++...+ .+.+|+. .++
T Consensus 147 ~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g---~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i~~~~~-~g~ 219 (300)
T 2qc5_A 147 YPAFITLGSDNA-LWFTENQNNSIGRITNTG---K-LEEYPLPTNAAAPVGITSGNDGALWFVEIMGN-KIGRITT-TGE 219 (300)
T ss_dssp CEEEEEECTTSS-EEEEETTTTEEEEECTTC---C-EEEEECSSTTCCEEEEEECTTSSEEEEETTTT-EEEEECT-TCC
T ss_pred CceeEEECCCCC-EEEEecCCCeEEEECCCC---c-EEEeeCCCCCCCcceEEECCCCCEEEEccCCC-EEEEEcC-CCc
Confidence 45555532 466 66665 56788887732 2 2222211111245555553 346888887654 2466776 455
Q ss_pred EEEE
Q 014962 264 LEQI 267 (415)
Q Consensus 264 L~~v 267 (415)
+..+
T Consensus 220 ~~~~ 223 (300)
T 2qc5_A 220 ISEY 223 (300)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 221
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=49.39 E-value=97 Score=32.71 Aligned_cols=105 Identities=13% Similarity=0.194 Sum_probs=56.9
Q ss_pred eEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeee-eccceEEEEEEE-eCCEEEEeecCCcEEEEEEEccCCeEE
Q 014962 189 VLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAV-GRTRFMIMLLTA-HFTRIAVGDCRDGILFYSYHEDARKLE 265 (415)
Q Consensus 189 V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~-~~~~~~i~sI~~-~~n~IlVGD~~~Sv~ll~y~~~~~~L~ 265 (415)
|.+|+.- +|. |.++..+.|+.|+.+. ..+..... ......+.+|.. .++.|.||....++ ++|+...+++.
T Consensus 133 i~~i~~d~~g~-lwi~t~~gl~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl--~~~~~~~~~~~ 206 (795)
T 4a2l_A 133 VNGIEEISPEQ-LLISTPEGLIMFDIKE---SKFIDDSFSTAMHKTIASTLYRQGDQIYIGTSTDGL--YTYSITQKTFE 206 (795)
T ss_dssp CCEEEEEETTE-EEEEETTEEEEEETTT---TEEECSSSCHHHHTCCEEEEEEETTEEEEEESSSCE--EEEETTTCCEE
T ss_pred EEEEEECCCCC-EEEEECCceEEEECCC---CEEEeccCCCCCCcceEEEEECCCCCEEEEECCCCE--EEEeCCCCeEE
Confidence 7777755 566 8889888899988754 22322111 000111455544 47789999877776 67787777766
Q ss_pred EEecCCCcceeEEEEeeeCCeE-EEeCCCCcEEEEe
Q 014962 266 QIYCDPSQRLVADCVLMDVDTA-VVSDRKGSIAVLS 300 (415)
Q Consensus 266 ~varD~~~~~vta~~~Ld~d~~-l~aD~~gNl~vl~ 300 (415)
.+........+.++..-.++.+ ++++..| |+.+.
T Consensus 207 ~~~~~~~~~~i~~i~~d~~g~lwigt~~~G-l~~~~ 241 (795)
T 4a2l_A 207 KVIPILGTKQIQAILQQSPTRIWVATEGAG-LFLIN 241 (795)
T ss_dssp ECC----CCCEEEEEEEETTEEEEEEBSSC-EEEEE
T ss_pred EecCCCCCCeeEEEEEcCCCCEEEEECCCC-eEEEe
Confidence 5532222334444443333433 4443333 55444
No 222
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=49.37 E-value=87 Score=29.70 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=59.8
Q ss_pred CCceEEEee---------eCCceEEEEeC--CeEEEEeeCCCCccceeeeeeeccceEEEEEEEe--C-CEEEEeecCCc
Q 014962 186 PGMVLAICP---------YLDRYFLASAG--NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH--F-TRIAVGDCRDG 251 (415)
Q Consensus 186 ~g~V~al~~---------~~g~yLl~~vg--~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~--~-n~IlVGD~~~S 251 (415)
.+.|.+|+- ..|+ +||+.+ +.|++|++... ..+...-.+. ..+.++.-. + ++++.|..-..
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~~~--~~~~~~~~~~--~~v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLTDE--GPILAGYPLS--SPGISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEETT--EEEEEEEECS--SCEEEEEEETTEEEEEEEEETTSE
T ss_pred CCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECCCC--ceeeeecCCC--CCcEEEEECCCCCceEEecCCCCE
Confidence 467888773 2567 666554 45999999753 2232222222 244555543 3 46788887777
Q ss_pred EEEEEEEccCCeEEEE----------------------ecCCCcceeEEEEee--eCCeEEEeCCCCcEEEEec
Q 014962 252 ILFYSYHEDARKLEQI----------------------YCDPSQRLVADCVLM--DVDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 252 v~ll~y~~~~~~L~~v----------------------arD~~~~~vta~~~L--d~d~~l~aD~~gNl~vl~~ 301 (415)
+.++............ ........+.++.+- |...++.+..++.+.++..
T Consensus 211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 7665433221111100 011122345555554 4457888888888888764
No 223
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=48.72 E-value=2.4e+02 Score=28.96 Aligned_cols=202 Identities=11% Similarity=-0.005 Sum_probs=0.0
Q ss_pred EEEeCCCccCEEEEec-CCCEEEEEEEeeCCCc----ceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEE
Q 014962 10 RKFHLGGTPKKVLYHS-ESRLLIVMRTELNNDT----CSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVV 84 (415)
Q Consensus 10 ~~i~L~~tp~~I~y~~-~~~~~~v~~~~~~~~~----~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvV 84 (415)
...|+...+...+..+ ..++|++......... ....+.++|+.+.+-...-.++..-...|...+.+.+..++++
T Consensus 180 ~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~ 259 (656)
T 1k3i_A 180 PTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVT 259 (656)
T ss_dssp EEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEE
T ss_pred eeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEe
Q ss_pred eeecCCCCCCCCCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCC
Q 014962 85 GTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASC 164 (415)
Q Consensus 85 GT~~~~~~~~~~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 164 (415)
| |.+.. .+.+|+..
T Consensus 260 G------------G~~~~---~v~~yd~~--------------------------------------------------- 273 (656)
T 1k3i_A 260 G------------GNDAK---KTSLYDSS--------------------------------------------------- 273 (656)
T ss_dssp C------------SSSTT---CEEEEEGG---------------------------------------------------
T ss_pred C------------CCCCC---ceEEecCc---------------------------------------------------
Q ss_pred CCccccccccceEEEEEEEecCCceEEEeee-CCceEEEEeC--------CeEEEEeeCCCCccceeee-----------
Q 014962 165 DGIKLEETETWQLRLAYSTTWPGMVLAICPY-LDRYFLASAG--------NAFYVCGFPNDNPQRVRRF----------- 224 (415)
Q Consensus 165 ~g~~~~~~~~~~L~l~~~~~~~g~V~al~~~-~g~yLl~~vg--------~~l~v~~~~~~~~~~L~~~----------- 224 (415)
..+.+.+......-.-.+++.+ +|+ |++.-| +.+.+|+... ..+...
T Consensus 274 ---------t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t---~~W~~~~~~~~~p~~~~ 340 (656)
T 1k3i_A 274 ---------SDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSS---KTWTSLPNAKVNPMLTA 340 (656)
T ss_dssp ---------GTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTT---TEEEEETTSCSGGGCCC
T ss_pred ---------CCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCC---CcceeCCCccccccccc
Q ss_pred ------------------------------------------------------eeeccceEEEEEEEeCCEEEE-ee--
Q 014962 225 ------------------------------------------------------AVGRTRFMIMLLTAHFTRIAV-GD-- 247 (415)
Q Consensus 225 ------------------------------------------------------a~~~~~~~i~sI~~~~n~IlV-GD-- 247 (415)
........++-+...++.|+| |-
T Consensus 341 ~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 341 DKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp CTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred cccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCC
Q ss_pred -------cCCcEEEEEEEccCCeEEEEe--cCCCcceeEEEEeeeCCeEEEe
Q 014962 248 -------CRDGILFYSYHEDARKLEQIY--CDPSQRLVADCVLMDVDTAVVS 290 (415)
Q Consensus 248 -------~~~Sv~ll~y~~~~~~L~~va--rD~~~~~vta~~~Ld~d~~l~a 290 (415)
......+..|++..++-..++ .=+.+|...++..+.++.+++.
T Consensus 421 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~ 472 (656)
T 1k3i_A 421 DYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFIT 472 (656)
T ss_dssp SSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEE
T ss_pred CCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEE
No 224
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=48.48 E-value=1.6e+02 Score=30.68 Aligned_cols=72 Identities=15% Similarity=0.217 Sum_probs=45.5
Q ss_pred ceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEE
Q 014962 188 MVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQ 266 (415)
Q Consensus 188 ~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~ 266 (415)
.|.+|..- +|. |-++..+.|+.|+...+ .+.. ........|.+|...++.|.||... + +++|+...+++..
T Consensus 64 ~i~~i~~d~~g~-lWigT~~Gl~~yd~~~~---~f~~-~~~~~~~~i~~i~~~~g~lWigt~~-G--l~~~~~~~~~~~~ 135 (758)
T 3ott_A 64 RIYCGVIIDNTY-LYMGTDNGILVYNYRAD---RYEQ-PETDFPTDVRTMALQGDTLWLGALN-G--LYTYQLQSRKLTS 135 (758)
T ss_dssp CEEEEEEETTTE-EEEEETTEEEEEETTTT---EECC-CSCCCCSCEEEEEEETTEEEEEETT-E--EEEEETTTCCEEE
T ss_pred eEEEEEEcCCCc-EEEEeCCCeEEEeCCCC---EEEC-cccCCCceEEEEEecCCcEEEEcCC-c--ceeEeCCCCeEEE
Confidence 46666544 455 88999999999987642 1221 0001112355555567899999854 5 5788887777776
Q ss_pred E
Q 014962 267 I 267 (415)
Q Consensus 267 v 267 (415)
+
T Consensus 136 ~ 136 (758)
T 3ott_A 136 F 136 (758)
T ss_dssp E
T ss_pred e
Confidence 6
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=47.68 E-value=22 Score=35.51 Aligned_cols=47 Identities=19% Similarity=0.317 Sum_probs=38.6
Q ss_pred eEEEEeCCCccCEEEEecCCC-EEEEEEEeeCCCcceeeEEEEeCCCCcEEEEE
Q 014962 8 NVRKFHLGGTPKKVLYHSESR-LLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60 (415)
Q Consensus 8 ~i~~i~L~~tp~~I~y~~~~~-~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~ 60 (415)
-+++||++..|..|+++|+.+ .+++... ....|.+||..|++++.++
T Consensus 362 vv~~I~vg~~P~gia~spDg~~~lyv~n~------~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 362 RINKIELGHEIDSINVSQDAEPLLYALSA------GTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEEEEEECEEEECCSSSCEEEEEET------TTTEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCcCeEEEccCCCEEEEEEcC------CCCeEEEEECCCCCEEEEe
Confidence 468899999999999999998 6655531 1357999999999999886
No 226
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=47.64 E-value=2.2e+02 Score=28.96 Aligned_cols=203 Identities=10% Similarity=-0.035 Sum_probs=0.0
Q ss_pred cCEEEEecCCCEEEEEEEeeCC--CcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecCCCCCCC
Q 014962 18 PKKVLYHSESRLLIVMRTELNN--DTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIM 95 (415)
Q Consensus 18 p~~I~y~~~~~~~~v~~~~~~~--~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~~~~~~~ 95 (415)
+..++++|+++.++....+... ......|.+.|..+++...-......+.......+.-.++.+..+.
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~---------- 132 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF---------- 132 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE----------
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE----------
Q ss_pred CCCCccccccEEEEEEEEecccCCCCCccccccCCCCCccCCCceeeecccccccccCcCCCCCCCCCCCCccccccccc
Q 014962 96 PSGEAESTKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETW 175 (415)
Q Consensus 96 ~~~e~~~~~Gri~vf~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 175 (415)
.+.|+++++. +-
T Consensus 133 --------~~~i~~~~~~------------------------------------------------------------~g 144 (723)
T 1xfd_A 133 --------ENNIYYCAHV------------------------------------------------------------GK 144 (723)
T ss_dssp --------TTEEEEESSS------------------------------------------------------------SS
T ss_pred --------CCeEEEEECC------------------------------------------------------------CC
Q ss_pred eEEEEEEEecCCc------------------eEEEeeeCCceEEEEeCC-------------------------------
Q 014962 176 QLRLAYSTTWPGM------------------VLAICPYLDRYFLASAGN------------------------------- 206 (415)
Q Consensus 176 ~L~l~~~~~~~g~------------------V~al~~~~g~yLl~~vg~------------------------------- 206 (415)
+.+.+......+. -.---.=.|++|+.+...
T Consensus 145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 224 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE 224 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC
T ss_pred ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC
Q ss_pred ----eEEEEeeCCCCccceeeeeee------ccceEEEEEEEeCCEEEEeecCCc--EEEEEEEccCCeEEEEecCCCcc
Q 014962 207 ----AFYVCGFPNDNPQRVRRFAVG------RTRFMIMLLTAHFTRIAVGDCRDG--ILFYSYHEDARKLEQIYCDPSQR 274 (415)
Q Consensus 207 ----~l~v~~~~~~~~~~L~~~a~~------~~~~~i~sI~~~~n~IlVGD~~~S--v~ll~y~~~~~~L~~varD~~~~ 274 (415)
.|++|++.. .+..+..... .....-......|.+|++.....+ ..++.|+...+++..+.......
T Consensus 225 ~~~~~l~~~d~~~--~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 302 (723)
T 1xfd_A 225 NPSISLHVIGLNG--PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEA 302 (723)
T ss_dssp CCEEEEEEEESSS--SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSS
T ss_pred CCeeEEEEEECCC--CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCC
Q ss_pred eeE----EEEeeeCCeEEE---eCCCC------cEEEEe
Q 014962 275 LVA----DCVLMDVDTAVV---SDRKG------SIAVLS 300 (415)
Q Consensus 275 ~vt----a~~~Ld~d~~l~---aD~~g------Nl~vl~ 300 (415)
|+. +..|-.++..|. ++.+| .|+++.
T Consensus 303 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 303 WLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred EEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=47.59 E-value=1.7e+02 Score=26.87 Aligned_cols=84 Identities=20% Similarity=0.168 Sum_probs=44.7
Q ss_pred EEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEEEEECCeeEEEEeeecC
Q 014962 10 RKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLS 89 (415)
Q Consensus 10 ~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~~~l~~~~~lvVGT~~~ 89 (415)
+.+.+...|..|+++|+.++++. + . ..|.++|+.+++...-...+.+.....+..+.+..+--+.|||...
T Consensus 84 ~~~~~~~~v~~i~~~~dg~l~v~-~-~-------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 84 TVHALPFMGSALAKISDSKQLIA-S-D-------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp EEEECSSCEEEEEEEETTEEEEE-E-T-------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEET
T ss_pred EEEECCCcceEEEEeCCCeEEEE-E-C-------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC
Confidence 44556667788888888765543 2 1 1388899888775432233222222233344444322245666532
Q ss_pred CCCCCCCCCCccccccEEEEEE
Q 014962 90 SGPAIMPSGEAESTKGRLIVLC 111 (415)
Q Consensus 90 ~~~~~~~~~e~~~~~Gri~vf~ 111 (415)
. .....|+|+.++
T Consensus 155 ~---------~~~~~~~l~~~~ 167 (326)
T 2ghs_A 155 K---------AETGAGSIYHVA 167 (326)
T ss_dssp T---------CCTTCEEEEEEE
T ss_pred c---------CCCCceEEEEEe
Confidence 1 123467777766
No 228
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=47.40 E-value=1.7e+02 Score=26.95 Aligned_cols=79 Identities=5% Similarity=-0.129 Sum_probs=39.4
Q ss_pred CeEEEEeeCCCCccceeeeeeeccceEE-EEEEEeCCEEEE-eec------CCcEEEEEEEccCCeEEEEecCCCcce--
Q 014962 206 NAFYVCGFPNDNPQRVRRFAVGRTRFMI-MLLTAHFTRIAV-GDC------RDGILFYSYHEDARKLEQIYCDPSQRL-- 275 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~a~~~~~~~i-~sI~~~~n~IlV-GD~------~~Sv~ll~y~~~~~~L~~varD~~~~~-- 275 (415)
+.+.+|++.. ..+...+..-.+-.. .++.+.++.|+| |-. ...+..+.++++.++-..++.-+.++.
T Consensus 168 ~~v~~yd~~~---~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPST---QQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTT---TEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred ccEEEEeCCC---CcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 5788898875 345554433222122 445556776555 422 333444444457777887766555543
Q ss_pred eEEEEeeeCCeE
Q 014962 276 VADCVLMDVDTA 287 (415)
Q Consensus 276 vta~~~Ld~d~~ 287 (415)
..++..+++.-+
T Consensus 245 ~~~~~~~~~~iy 256 (357)
T 2uvk_A 245 GGFAGISNDSLI 256 (357)
T ss_dssp SCEEEEETTEEE
T ss_pred cceEEEECCEEE
Confidence 333444444433
No 229
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=46.74 E-value=79 Score=30.69 Aligned_cols=101 Identities=11% Similarity=0.024 Sum_probs=55.0
Q ss_pred CCceEEEEe--CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCe-EEEEec--C
Q 014962 196 LDRYFLASA--GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK-LEQIYC--D 270 (415)
Q Consensus 196 ~g~yLl~~v--g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~-L~~var--D 270 (415)
.|+ |+++- +++|++|++.. ..+........... ..+...+++++++|....-.++.|+...+. ...++. .
T Consensus 141 ~g~-lyv~d~~~~~I~~id~~~---g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~ 215 (409)
T 3hrp_A 141 NNT-VLAYQRDDPRVRLISVDD---NKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGS 215 (409)
T ss_dssp TTE-EEEEETTTTEEEEEETTT---TEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCT
T ss_pred CCC-EEEEecCCCcEEEEECCC---CEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccc
Confidence 466 55553 36788888864 23333222221223 556667889999998664356777776443 233311 1
Q ss_pred CCcceeEEEEeee-CCeEEEeCCCCcEEEEec
Q 014962 271 PSQRLVADCVLMD-VDTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 271 ~~~~~vta~~~Ld-~d~~l~aD~~gNl~vl~~ 301 (415)
....++.++.+-. +..++++|..+.|+.+..
T Consensus 216 ~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~ 247 (409)
T 3hrp_A 216 TFSGKIGAVALDETEEWLYFVDSNKNFGRFNV 247 (409)
T ss_dssp TSCSCCCBCEECTTSSEEEEECTTCEEEEEET
T ss_pred hhcCCcEEEEEeCCCCeEEEEECCCcEEEEEC
Confidence 0123333333322 346666888777777664
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=44.25 E-value=1.8e+02 Score=26.19 Aligned_cols=84 Identities=7% Similarity=0.087 Sum_probs=42.0
Q ss_pred CeEEEEeeCCCCccceeee-eeecc-ceE--EEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEEEEe
Q 014962 206 NAFYVCGFPNDNPQRVRRF-AVGRT-RFM--IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~-a~~~~-~~~--i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta~~~ 281 (415)
+.|++|++..+ . +... .+... ... -..++..|+ |++++ ..+ +.+|+++...+..+.-. ..++++.|
T Consensus 215 ~~i~~~~~~~~--~-l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~-~~g--v~~~~~~g~~~~~~~~~---~~~~~~~f 284 (305)
T 3dr2_A 215 VEITAFAWRDG--A-LHDRRHFASVPDGLPDGFCVDRGGW-LWSSS-GTG--VCVFDSDGQLLGHIPTP---GTASNCTF 284 (305)
T ss_dssp CEEEEEEEETT--E-EEEEEEEECCSSSCCCSEEECTTSC-EEECC-SSE--EEEECTTSCEEEEEECS---SCCCEEEE
T ss_pred CEEEEEEecCC--C-ccCCeEEEECCCCCCCeEEECCCCC-EEEec-CCc--EEEECCCCCEEEEEECC---CceeEEEE
Confidence 57888888642 1 2211 11110 011 223444555 88888 445 67888876666655433 24666666
Q ss_pred eeCC-eEEEeCCCCcEEEEe
Q 014962 282 MDVD-TAVVSDRKGSIAVLS 300 (415)
Q Consensus 282 Ld~d-~~l~aD~~gNl~vl~ 300 (415)
-++. .+.++.. +.|+.++
T Consensus 285 ~~d~~~L~it~~-~~l~~~~ 303 (305)
T 3dr2_A 285 DQAQQRLFITGG-PCLWMLP 303 (305)
T ss_dssp CTTSCEEEEEET-TEEEEEE
T ss_pred eCCCCEEEEEcC-CeEEEEE
Confidence 4332 3332222 3555554
No 231
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=42.60 E-value=2.3e+02 Score=27.04 Aligned_cols=100 Identities=9% Similarity=-0.072 Sum_probs=0.0
Q ss_pred eEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcceeEE
Q 014962 199 YFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278 (415)
Q Consensus 199 yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~~vta 278 (415)
+|+++.++.|+.+++.. ..+............+..+..+++|++.|.... .+.+++.+......+.........--
T Consensus 89 ~l~~~~~~~I~~i~~~~---~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~-~I~r~~~~g~~~~~~~~~~~~~p~gl 164 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHR---SEYTLLLNNLENAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLESPGGL 164 (386)
T ss_dssp EEEEECBSCEEEECTTS---CCCEEEECSCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCCEEEEECSSCSCCCCE
T ss_pred eeEeecCccceeeccCC---CcEEEEecCCCccEEEEEecCCCeEEEEeCCCC-cEEEEecCCCCcEEEEeCCCCCccEE
Q ss_pred EEeeeCCeEEEeCCCCc-EEEEecC
Q 014962 279 CVLMDVDTAVVSDRKGS-IAVLSCS 302 (415)
Q Consensus 279 ~~~Ld~d~~l~aD~~gN-l~vl~~~ 302 (415)
+.--..+.+..+|...+ |.++..+
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTT
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCC
No 232
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=41.50 E-value=55 Score=34.64 Aligned_cols=66 Identities=14% Similarity=-0.046 Sum_probs=36.6
Q ss_pred EEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecC-CCcceeEEEEeeeCCeEEEeCCCCc-EEEEe
Q 014962 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD-PSQRLVADCVLMDVDTAVVSDRKGS-IAVLS 300 (415)
Q Consensus 233 i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD-~~~~~vta~~~Ld~d~~l~aD~~gN-l~vl~ 300 (415)
.+.++..+++|++.|..... +.+|+.+......+... ....+..++.+ +.+.++.+|...+ |+.+.
T Consensus 544 Glavd~~~~~LY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~~~~P~glav-d~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp CEEECTTTCCEEEEETTTTE-EEEECSSSSCCEEECCCSSSCSSCCCCEE-ETTEEEEECSTTTCEEEEE
T ss_pred EEEEeccCCEEEEEecCCCe-EEEEccCCCceEEEEecCCcCCCceEeEE-ECCEEEEEeCCCCeEEEEE
Confidence 34455567899999976532 45555554444444432 12222333333 6778888886543 55554
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=40.81 E-value=1.9e+02 Score=25.41 Aligned_cols=102 Identities=11% Similarity=-0.029 Sum_probs=53.1
Q ss_pred ceEEEEeCCeEEEEeeCCCCccceeeeeeeccc-eEEEEEEE--eCCEEEEeecCCcEEEEEEEccCCeEEEEecCCCcc
Q 014962 198 RYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR-FMIMLLTA--HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR 274 (415)
Q Consensus 198 ~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~-~~i~sI~~--~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD~~~~ 274 (415)
.+|+.+-.+.|+.+++.....+.+........+ ..+..|.. .+++|++.|....- +.+|+.+......+... ...
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~-I~~~~~~g~~~~~~~~~-~~~ 79 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPS-IGRASLHGGEPTTIIRQ-DLG 79 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTE-EEEEESSSCCCEEEECT-TCC
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCE-EEEEecCCCCcEEEEEC-CCC
Confidence 357777777888888875221111111111111 13444544 46899999987643 56777765544333322 111
Q ss_pred eeEEEEeee--CCeEEEeCCC-CcEEEEecC
Q 014962 275 LVADCVLMD--VDTAVVSDRK-GSIAVLSCS 302 (415)
Q Consensus 275 ~vta~~~Ld--~d~~l~aD~~-gNl~vl~~~ 302 (415)
....+. +| .+.+..+|.. +.|+++..+
T Consensus 80 ~p~~ia-~d~~~~~lyv~d~~~~~I~~~~~~ 109 (267)
T 1npe_A 80 SPEGIA-LDHLGRTIFWTDSQLDRIEVAKMD 109 (267)
T ss_dssp CEEEEE-EETTTTEEEEEETTTTEEEEEETT
T ss_pred CccEEE-EEecCCeEEEEECCCCEEEEEEcC
Confidence 223333 34 3467777764 346666544
No 234
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=38.93 E-value=2.7e+02 Score=26.73 Aligned_cols=102 Identities=12% Similarity=-0.057 Sum_probs=54.4
Q ss_pred eeCCceEEEEe-C--CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecC
Q 014962 194 PYLDRYFLASA-G--NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD 270 (415)
Q Consensus 194 ~~~g~yLl~~v-g--~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD 270 (415)
+..|+ |..+- | ++|+.+++.......+.. .... ......++..+++|++.|....- +.+++.+......+...
T Consensus 211 p~~g~-ly~td~~~~~~I~~~~~dG~~~~~~~~-~~l~-~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~ 286 (400)
T 3p5b_L 211 PVHGF-MYWTDWGTPAKIKKGGLNGVDIYSLVT-ENIQ-WPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILED 286 (400)
T ss_dssp TTTTE-EEEEECSSSCCEEEEETTSCSCEEEEC-SSCS-CEEEEEEETTTTEEEEEETTTTE-EEEEETTSCCCEEEEEC
T ss_pred cccCe-EEEEeCCCCCEEEEEeCCCCccEEEEE-CCCC-ceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCCccEEEEeC
Confidence 45566 66554 3 567777776422111211 1111 22344455568899999986542 45566555444444433
Q ss_pred -CCcceeEEEEeeeCCeEEEeCCCCc-EEEEe
Q 014962 271 -PSQRLVADCVLMDVDTAVVSDRKGS-IAVLS 300 (415)
Q Consensus 271 -~~~~~vta~~~Ld~d~~l~aD~~gN-l~vl~ 300 (415)
....+..++.+ +++.++.+|...+ |+.+.
T Consensus 287 ~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 287 EKRLAHPFSLAV-FEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp SSTTSSEEEEEE-ETTEEEEEESSSCSEEEEE
T ss_pred CCCCCCCEEEEE-eCCEEEEecCCCCeEEEEE
Confidence 22334445554 7788888886543 55454
No 235
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=38.76 E-value=2.3e+02 Score=25.88 Aligned_cols=93 Identities=9% Similarity=0.011 Sum_probs=46.7
Q ss_pred CeEEEEeeCCCCccceeeeeeeccceEEEEEEE-eCCEEEEeecCC----cEEEEEEEccCCeEEEEecCCCcceeEEEE
Q 014962 206 NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA-HFTRIAVGDCRD----GILFYSYHEDARKLEQIYCDPSQRLVADCV 280 (415)
Q Consensus 206 ~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~-~~n~IlVGD~~~----Sv~ll~y~~~~~~L~~varD~~~~~vta~~ 280 (415)
..|+++++... .++..........-..+.. .+.+|+...... ...++.++.+......+.......++....
T Consensus 168 ~~l~~~d~~~g---~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 168 CRLMRVDLKTG---ESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp EEEEEEETTTC---CEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE
T ss_pred ceEEEEECCCC---ceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccce
Confidence 45777777642 2333333332334445555 667776544321 234555666666666665544334566656
Q ss_pred eeeC-CeE-EEeCCCC--c--EEEEec
Q 014962 281 LMDV-DTA-VVSDRKG--S--IAVLSC 301 (415)
Q Consensus 281 ~Ld~-d~~-l~aD~~g--N--l~vl~~ 301 (415)
+-.+ ..+ ..++..+ + |+++..
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEec
Confidence 5433 333 3344333 2 666654
No 236
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=36.37 E-value=3.3e+02 Score=26.95 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=52.6
Q ss_pred eCCceEEEEeC------CeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEe
Q 014962 195 YLDRYFLASAG------NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIY 268 (415)
Q Consensus 195 ~~g~yLl~~vg------~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~va 268 (415)
=.|+ .|+..+ ..|+++++... .++..........-......|.+|+.++.-....++.|+.+.++.. +-
T Consensus 159 pDG~-~la~~~~~~~~~~~i~~~d~~~g---~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~ 233 (582)
T 3o4h_A 159 IRGD-LIAGLGFFGGGRVSLFTSNLSSG---GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL 233 (582)
T ss_dssp EETT-EEEEEEEEETTEEEEEEEETTTC---CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC
T ss_pred CCCC-EEEEEEEcCCCCeEEEEEcCCCC---CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec
Confidence 3688 444332 34777776542 2333222222223344445677888777655567788888777766 33
Q ss_pred cCCCcceeEEEE--------eeeC-CeEEEeCCCCcEEEEec
Q 014962 269 CDPSQRLVADCV--------LMDV-DTAVVSDRKGSIAVLSC 301 (415)
Q Consensus 269 rD~~~~~vta~~--------~Ld~-d~~l~aD~~gNl~vl~~ 301 (415)
.+. ..++.+.. +-.+ ..++.+..+|.+.++..
T Consensus 234 ~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 234 ELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 332 12222222 3222 24455666677666665
No 237
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=35.59 E-value=4e+02 Score=27.74 Aligned_cols=76 Identities=7% Similarity=0.066 Sum_probs=49.0
Q ss_pred ceEEEeeeC---CceEEEEe-CCeEEEEeeCCCCccceeeeeeec---c-ceEEEEEEE-eCCEEEEeecCCcEEEEEEE
Q 014962 188 MVLAICPYL---DRYFLASA-GNAFYVCGFPNDNPQRVRRFAVGR---T-RFMIMLLTA-HFTRIAVGDCRDGILFYSYH 258 (415)
Q Consensus 188 ~V~al~~~~---g~yLl~~v-g~~l~v~~~~~~~~~~L~~~a~~~---~-~~~i~sI~~-~~n~IlVGD~~~Sv~ll~y~ 258 (415)
.|.+|+.-. |. |.++. ++.|+.|+.+. ..++...... . ...|.+|.. .++.|.+|....++ ++|+
T Consensus 116 ~i~~i~~d~~~~g~-lwi~t~~~gl~~~~~~~---~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~~Gl--~~~~ 189 (781)
T 3v9f_A 116 DVTHITSSVQAGKG-LWVCTYYRGIEYLDIAT---GKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGL--SILS 189 (781)
T ss_dssp CEEEEEECSSTTSE-EEEEESSSCEEEEETTT---TEEEEESTTTCTTCSCCCEEEEEEEETTEEEEEETTTEE--EEEE
T ss_pred cceEEEecCccCCC-EEEEECCCCeeEEECCC---CeEEeeccCcccCCCccceEEEEECCCCCEEEEecCCCe--EEEc
Confidence 577777654 66 88887 78899998764 2233321100 0 123566655 47899999877775 7788
Q ss_pred ccCCeEEEEec
Q 014962 259 EDARKLEQIYC 269 (415)
Q Consensus 259 ~~~~~L~~var 269 (415)
...+++..+..
T Consensus 190 ~~~~~~~~~~~ 200 (781)
T 3v9f_A 190 LNDKSVKHFVH 200 (781)
T ss_dssp TTTTEEEEECC
T ss_pred CCCCceEeeec
Confidence 88887776643
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=35.24 E-value=2.3e+02 Score=24.80 Aligned_cols=97 Identities=7% Similarity=-0.055 Sum_probs=50.6
Q ss_pred CCceEEEEe----CCeEEEEeeCCCCccceeeeeeecc-ceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecC
Q 014962 196 LDRYFLASA----GNAFYVCGFPNDNPQRVRRFAVGRT-RFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD 270 (415)
Q Consensus 196 ~g~yLl~~v----g~~l~v~~~~~~~~~~L~~~a~~~~-~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD 270 (415)
.|+ |.++- +++|+++++... ..+....... ...-..++..+++++++|.... .+.+|+.+......+...
T Consensus 133 ~g~-lyv~~~~~~~~~I~~~~~dg~---~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~-~I~~~~~~g~~~~~~~~~ 207 (267)
T 1npe_A 133 RGN-LYWTDWNRDNPKIETSHMDGT---NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH-RAECLNPAQPGRRKVLEG 207 (267)
T ss_dssp TTE-EEEEECCSSSCEEEEEETTSC---CCEEEECTTCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTEEEEEEEEEC
T ss_pred CCE-EEEEECCCCCcEEEEEecCCC---CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCC-EEEEEecCCCceEEEecC
Confidence 455 65554 357777777542 1222111111 1123344445789999998754 245667665544444332
Q ss_pred CCcceeEEEEeeeCCeEEEeCCC-CcEEEEe
Q 014962 271 PSQRLVADCVLMDVDTAVVSDRK-GSIAVLS 300 (415)
Q Consensus 271 ~~~~~vta~~~Ld~d~~l~aD~~-gNl~vl~ 300 (415)
. .+...+. +|++.+.++|.. +.|+++.
T Consensus 208 ~--~~P~gi~-~d~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 208 L--QYPFAVT-SYGKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp C--CSEEEEE-EETTEEEEEETTTTEEEEEE
T ss_pred C--CCceEEE-EeCCEEEEEECCCCeEEEEe
Confidence 1 1222332 467788888865 4455554
No 239
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=34.91 E-value=2.5e+02 Score=25.17 Aligned_cols=38 Identities=5% Similarity=-0.087 Sum_probs=21.6
Q ss_pred EEEEeCCC-ccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCC
Q 014962 9 VRKFHLGG-TPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPL 52 (415)
Q Consensus 9 i~~i~L~~-tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~ 52 (415)
++++.-+. .+.-.+++|+.+.++++.. ....|..+++.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~------~~~~i~~~~~~ 75 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDL------VGRRVLGWRED 75 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEET------TTTEEEEEETT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEEC------CCCEEEEEeCC
Confidence 34444444 5667788888875544431 12346677773
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=33.50 E-value=2.7e+02 Score=25.16 Aligned_cols=108 Identities=8% Similarity=0.030 Sum_probs=56.6
Q ss_pred ceEEEeee--CCceEEEE-eCCeEEEEeeCCCCccceeeeeee-c-cc-eEEEEEEEe--CCEEEEeecCC---------
Q 014962 188 MVLAICPY--LDRYFLAS-AGNAFYVCGFPNDNPQRVRRFAVG-R-TR-FMIMLLTAH--FTRIAVGDCRD--------- 250 (415)
Q Consensus 188 ~V~al~~~--~g~yLl~~-vg~~l~v~~~~~~~~~~L~~~a~~-~-~~-~~i~sI~~~--~n~IlVGD~~~--------- 250 (415)
.+.+|+-- .|+ |+++ .++.++.++... ..++..+.. . .+ ..+..|.+. ++.|+|+|...
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEG---GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTC---EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCC---CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 45666644 466 7666 566677777652 222222211 1 11 135556654 35799999652
Q ss_pred -------cEEEEEEEccCCeEEEEecCCCcceeEEEEeeeC--CeEEEeCCC-CcEEEEecC
Q 014962 251 -------GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV--DTAVVSDRK-GSIAVLSCS 302 (415)
Q Consensus 251 -------Sv~ll~y~~~~~~L~~varD~~~~~vta~~~Ld~--d~~l~aD~~-gNl~vl~~~ 302 (415)
.=.+++|+...+++..+..... ....+. ++. +.+.++|.. +.|+++...
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~--~p~gia-~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLKELH--VPGGAE-VSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEEEES--CCCEEE-ECTTSSEEEEEEGGGTEEEEEESS
T ss_pred ehcccCCCceEEEEeCCCCEEEEeccCCc--cCcceE-ECCCCCEEEEEeCCCCeEEEEECC
Confidence 2457888887777665543311 111122 333 246666653 557666644
No 241
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=33.35 E-value=4.2e+02 Score=27.28 Aligned_cols=36 Identities=17% Similarity=0.143 Sum_probs=25.8
Q ss_pred EEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEE
Q 014962 21 VLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLS 58 (415)
Q Consensus 21 I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~ 58 (415)
+.++|+.+.++...... +.....|+++|..|++.+.
T Consensus 134 ~~~SpDg~~lAy~~~~~--G~~~~~i~v~dl~tg~~~~ 169 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLA--GSDWREIHLMDVESKQPLE 169 (693)
T ss_dssp EEECTTSSEEEEEEECS--SCCEEEEEEEETTTCSEEE
T ss_pred EEECCCCCEEEEEEecC--CCceEEEEEEECCCCCCCc
Confidence 46778887777665443 3455789999999998654
No 242
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=33.13 E-value=5e+02 Score=28.12 Aligned_cols=93 Identities=10% Similarity=0.004 Sum_probs=48.5
Q ss_pred CceEEEeee-CCceEEEEeC-CeEEEEeeCCCCccceeeee-eeccceEEEEEEEeCCEEEEeecCC--------cEEEE
Q 014962 187 GMVLAICPY-LDRYFLASAG-NAFYVCGFPNDNPQRVRRFA-VGRTRFMIMLLTAHFTRIAVGDCRD--------GILFY 255 (415)
Q Consensus 187 g~V~al~~~-~g~yLl~~vg-~~l~v~~~~~~~~~~L~~~a-~~~~~~~i~sI~~~~n~IlVGD~~~--------Sv~ll 255 (415)
+.+.+++-- .|++|+.+.. ..|++|++... + ++... .....+........+.+|+.+.... .-.++
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg--~-~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETG--K-PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTC--C-EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCC--c-eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 445555522 4674554444 46899998752 2 32222 2222333445556777777765422 23456
Q ss_pred EEEccCCeEEEEecCCCcceeEEEEeeeC
Q 014962 256 SYHEDARKLEQIYCDPSQRLVADCVLMDV 284 (415)
Q Consensus 256 ~y~~~~~~L~~varD~~~~~vta~~~Ld~ 284 (415)
.|+...+++..+... ...+.++.|-.+
T Consensus 456 l~d~~~g~~~~l~~~--~~~~~~~~~spd 482 (1045)
T 1k32_A 456 VYDMEGRKIFAATTE--NSHDYAPAFDAD 482 (1045)
T ss_dssp EEETTTTEEEECSCS--SSBEEEEEECTT
T ss_pred EEECCCCcEEEeeCC--CcccCCceEcCC
Confidence 677766665554433 233445555433
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=31.97 E-value=4.6e+02 Score=27.28 Aligned_cols=46 Identities=20% Similarity=0.255 Sum_probs=34.8
Q ss_pred EEEEecCCCEEEEEEEeeC------------CCcceeeEEEEeCCCCcEEEEEeCCCC
Q 014962 20 KVLYHSESRLLIVMRTELN------------NDTCSSDICCVDPLSGSVLSSFKLELG 65 (415)
Q Consensus 20 ~I~y~~~~~~~~v~~~~~~------------~~~~~s~i~l~d~~t~~~i~s~~l~~~ 65 (415)
-++|+|+.+++++.+.+.. .+.+..+|..+|+.|++.+..++..++
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~ 296 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPG 296 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCc
Confidence 4789999888887764431 233455799999999999999987654
No 244
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=31.43 E-value=2.2e+02 Score=26.17 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=31.3
Q ss_pred EEEEEEccCCeEEEEecCCCccee-EEEEeeeCCeEEEeC------CCCcEEEEec
Q 014962 253 LFYSYHEDARKLEQIYCDPSQRLV-ADCVLMDVDTAVVSD------RKGSIAVLSC 301 (415)
Q Consensus 253 ~ll~y~~~~~~L~~varD~~~~~v-ta~~~Ld~d~~l~aD------~~gNl~vl~~ 301 (415)
.+..|+...++-..++.-+.++.. .++..+++.-++.+= ....++.+.+
T Consensus 169 ~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 169 FLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred cEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 578899999999888876666555 555555555443321 2345666665
No 245
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=31.15 E-value=3.6e+02 Score=25.82 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=34.7
Q ss_pred eEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccC
Q 014962 199 YFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 199 yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
+|+.+-++.|+..++...+ .............+..+..++.|++.|..... +.+++.+.
T Consensus 85 ~ll~~~~~~I~~i~l~~~~---~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~-I~~~~~~g 143 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSE---YTSLIPNLRNVVALDTEVASNRIYWSDLSQRM-ICSTQLDR 143 (400)
T ss_dssp EEEEEETTEEEEECTTSCS---CEEEECSCSCEEEEEEETTTTEEEEEETTTTE-EEEEEC--
T ss_pred eeEEeccceeEEEccCCcc---eeEeccccCcceEEeeeeccCceEEEecCCCe-EEEEEccc
Confidence 3888888999888887532 22211111223444445567899999987653 45665543
No 246
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=30.50 E-value=4.7e+02 Score=28.38 Aligned_cols=120 Identities=9% Similarity=0.046 Sum_probs=64.0
Q ss_pred eEEEEEEEecCCceEEEeeeCCceEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecC----Cc
Q 014962 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCR----DG 251 (415)
Q Consensus 176 ~L~l~~~~~~~g~V~al~~~~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~----~S 251 (415)
||.-.+..-..+.+.+.+-- |..|+.+....|++|++.. ...+.+..+........+...|.+|+.+... ..
T Consensus 4 kl~~~~g~~~~~~~~~~~~S-~~~iaf~~~~~l~~~~~~g---g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~ 79 (1045)
T 1k32_A 4 KLHEMHGLCMPNLLLNPDIH-GDRIIFVCCDDLWEHDLKS---GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNT 79 (1045)
T ss_dssp ---------CCCCCEEEEEE-TTEEEEEETTEEEEEETTT---CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCE
T ss_pred cccccccccccceEeCcEEe-CCEEEEEECCcEEEEECCC---CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCC
Confidence 34334434344555555422 5547777778899999865 2244434444444555566678888876433 34
Q ss_pred EEEEEEEccCCeEEEEecCCCccee-------EEEEeeeCCe-EEEeCCC------CcEEEEec
Q 014962 252 ILFYSYHEDARKLEQIYCDPSQRLV-------ADCVLMDVDT-AVVSDRK------GSIAVLSC 301 (415)
Q Consensus 252 v~ll~y~~~~~~L~~varD~~~~~v-------ta~~~Ld~d~-~l~aD~~------gNl~vl~~ 301 (415)
..++.++...+....+... +.++ .++.|-.++. ++.++.+ ..|+.+..
T Consensus 80 ~~i~~~d~~~g~~~~lt~~--~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~ 141 (1045)
T 1k32_A 80 ADLYFYNGENGEIKRITYF--SGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVEN 141 (1045)
T ss_dssp EEEEEEETTTTEEEECCCC--CEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEG
T ss_pred CeEEEEECCCCCeEEcccC--CCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEEC
Confidence 5667777777776665443 3344 6666654443 4444433 34776654
No 247
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=29.84 E-value=4.6e+02 Score=26.67 Aligned_cols=51 Identities=10% Similarity=0.122 Sum_probs=41.7
Q ss_pred ceeEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeC
Q 014962 6 RLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKL 62 (415)
Q Consensus 6 ~~~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l 62 (415)
.+.+..|+.+.-|+-+.++|+.+.++|+... ...|.++|..+++++..+..
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~------sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANA------RNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGG------GTEEEEEETTTTEEEEEEEC
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCC------CCeEEEEECCCCcEEEEEec
Confidence 4667889999999999999999988887632 34589999999998887766
No 248
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=28.45 E-value=3.6e+02 Score=24.96 Aligned_cols=101 Identities=9% Similarity=-0.077 Sum_probs=53.3
Q ss_pred eeCCceEEEEe---CCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccCCeEEEEecC
Q 014962 194 PYLDRYFLASA---GNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD 270 (415)
Q Consensus 194 ~~~g~yLl~~v---g~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~~L~~varD 270 (415)
+..|. |..+- +.+|+.+++.....+.+.. .... ......++..+++|++.|..... +.+++.+......+...
T Consensus 131 p~~g~-ly~td~~~~~~I~r~~~dG~~~~~~~~-~~l~-~Pnglavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~ 206 (318)
T 3sov_A 131 PSSGF-MYWTDWGEVPKIERAGMDGSSRFIIIN-SEIY-WPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTNRQAVVKG 206 (318)
T ss_dssp GGGTE-EEEEECSSSCEEEEEETTSCSCEEEEC-SSCS-CEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECS
T ss_pred CCCCE-EEEEecCCCCEEEEEEcCCCCeEEEEE-CCCC-CccEEEEeccCCEEEEEECCCCE-EEEEcCCCCceEEEecC
Confidence 34566 66654 3667777775421111211 1111 11344445568999999987653 45666654444444432
Q ss_pred CCcceeEEEEeeeCCeEEEeCCCCc-EEEEe
Q 014962 271 PSQRLVADCVLMDVDTAVVSDRKGS-IAVLS 300 (415)
Q Consensus 271 ~~~~~vta~~~Ld~d~~l~aD~~gN-l~vl~ 300 (415)
. ..+..++.+ +++.++.+|...+ |+.+.
T Consensus 207 ~-~~~P~glav-~~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 207 S-LPHPFALTL-FEDILYWTDWSTHSILACN 235 (318)
T ss_dssp C-CSCEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred C-CCCceEEEE-eCCEEEEEecCCCeEEEEE
Confidence 2 223334443 6788888887544 55444
No 249
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=28.06 E-value=2e+02 Score=28.24 Aligned_cols=58 Identities=12% Similarity=0.214 Sum_probs=42.7
Q ss_pred EEEEEEeCCEEEEeecCCcEEEEEEEccC-----CeEEEEecCCCcceeEEEEeeeCCeEEEeCCCCcEEEEe
Q 014962 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDA-----RKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300 (415)
Q Consensus 233 i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~-----~~L~~varD~~~~~vta~~~Ld~d~~l~aD~~gNl~vl~ 300 (415)
...++...+.|+++++-+.- +..|++.. ..+..+++|..-.|...+.+ |.+|+||++.
T Consensus 279 ~~~~D~~~G~ly~~~~~~~a-I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i---------~~~g~Lwv~s 341 (381)
T 3q6k_A 279 ALAYDPKTKVIFFAEANTKQ-VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISV---------DSKGGLWFMS 341 (381)
T ss_dssp EEEECTTTCEEEEEESSSSE-EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEE---------CTTSCEEEEE
T ss_pred eEEEeCCCCeEEEEeccCCe-EEEEeCCCCccccCceEEEEECCCccccCeEEE---------CCCCeEEEEE
Confidence 33443345789999987653 47778765 57899999998889988764 5677888876
No 250
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=26.91 E-value=5.4e+02 Score=26.57 Aligned_cols=74 Identities=9% Similarity=0.129 Sum_probs=45.3
Q ss_pred CceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeeeec----cceEEEEEEEe--CCEEEEeecCCcEEEEEEEc
Q 014962 187 GMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGR----TRFMIMLLTAH--FTRIAVGDCRDGILFYSYHE 259 (415)
Q Consensus 187 g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~----~~~~i~sI~~~--~n~IlVGD~~~Sv~ll~y~~ 259 (415)
..|.+|+.- +|. |.++..+.|+.|+... ..++...... ....|.+|... ++.|.||.- .+ +++|++
T Consensus 146 ~~i~~i~~d~~g~-lWigt~~Gl~~~~~~~---~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G--l~~~~~ 218 (758)
T 3ott_A 146 NTIYSIIRTKDNQ-IYVGTYNGLCRYIPSN---GKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY--LFQYFP 218 (758)
T ss_dssp SCEEEEEECTTCC-EEEEETTEEEEEETTT---TEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE--EEEEET
T ss_pred CeEEEEEEcCCCC-EEEEeCCCHhhCccCC---CceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CC--CeEEcC
Confidence 457787765 567 8888888888887754 2232211110 11236666554 467899983 44 578888
Q ss_pred cCCeEEEE
Q 014962 260 DARKLEQI 267 (415)
Q Consensus 260 ~~~~L~~v 267 (415)
..+++..+
T Consensus 219 ~~~~~~~~ 226 (758)
T 3ott_A 219 STGQIKQT 226 (758)
T ss_dssp TTTEEEEE
T ss_pred CCCeEEec
Confidence 87776544
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=25.93 E-value=3.8e+02 Score=24.45 Aligned_cols=59 Identities=12% Similarity=0.072 Sum_probs=31.9
Q ss_pred eEEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEccC
Q 014962 199 YFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 199 yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
+|+++.++.|..+++...+ ......... .......+..++.|++.|....- +.+++...
T Consensus 3 ~ll~~~~~~I~~i~~~~~~--~~~~~~~~~-~p~g~~~d~~~~~ly~~D~~~~~-I~~~~~~g 61 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSE--YTSLIPNLR-NVVALDTEVASNRIYWSDLSQRM-ICSTQLDR 61 (316)
T ss_dssp EEEEECBSSEEEEETTSCC--CEEEECSCS-SEEEEEEETTTTEEEEEETTTTE-EEEEEC--
T ss_pred EEEEECCCeEEEEECCCcc--eEehhcCCC-ceEEEEEEeCCCEEEEEECCCCc-EEEEECCC
Confidence 3888888888888887521 111111111 12233333456789998887542 45555543
No 252
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=25.11 E-value=3.9e+02 Score=24.28 Aligned_cols=110 Identities=13% Similarity=0.073 Sum_probs=61.2
Q ss_pred cCCceEEEeee-CCceEEEEeCCeEEEEeeCCCCccceeeeeeec---cceEEEEEEEe-CCEEEEeecC-----CcEEE
Q 014962 185 WPGMVLAICPY-LDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGR---TRFMIMLLTAH-FTRIAVGDCR-----DGILF 254 (415)
Q Consensus 185 ~~g~V~al~~~-~g~yLl~~vg~~l~v~~~~~~~~~~L~~~a~~~---~~~~i~sI~~~-~n~IlVGD~~-----~Sv~l 254 (415)
..+.|.++..- .|+ ++++....|++|++.. ..++...... ....+..+... .+.+++|+.. ..-.+
T Consensus 88 ~~~~v~~i~~~~dg~-l~v~~~~gl~~~d~~~---g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 88 LPFMGSALAKISDSK-QLIASDDGLFLRDTAT---GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSI 163 (326)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTEEEEEETTT---CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEE
T ss_pred CCCcceEEEEeCCCe-EEEEECCCEEEEECCC---CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEE
Confidence 35678888744 567 7788888899998864 2233322111 11245555543 2357888763 24567
Q ss_pred EEEEccCCeEEEEecCCCcceeEEEEee-eCCeEEEeCC-CCcEEEEecC
Q 014962 255 YSYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAVVSDR-KGSIAVLSCS 302 (415)
Q Consensus 255 l~y~~~~~~L~~varD~~~~~vta~~~L-d~d~~l~aD~-~gNl~vl~~~ 302 (415)
++|+ .+++..+..+.. ....+.+- |.+.+..+|. .+.|+++.++
T Consensus 164 ~~~~--~g~~~~~~~~~~--~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 164 YHVA--KGKVTKLFADIS--IPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEE--TTEEEEEEEEES--SEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred EEEe--CCcEEEeeCCCc--ccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 8887 466655543211 22233332 2234556654 5678888864
No 253
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=25.05 E-value=4.6e+02 Score=25.10 Aligned_cols=71 Identities=6% Similarity=0.014 Sum_probs=47.4
Q ss_pred eEEEEEEEeC-CEEEEeecCC-cEEEEEEEccCCeEEEEecCCCc----ceeEEEEee-eCCeEEEeCCCCcEEEEecC
Q 014962 231 FMIMLLTAHF-TRIAVGDCRD-GILFYSYHEDARKLEQIYCDPSQ----RLVADCVLM-DVDTAVVSDRKGSIAVLSCS 302 (415)
Q Consensus 231 ~~i~sI~~~~-n~IlVGD~~~-Sv~ll~y~~~~~~L~~varD~~~----~~vta~~~L-d~d~~l~aD~~gNl~vl~~~ 302 (415)
..+..|.+.. ..++|.|... +. +++++++...+.....+... ...+-+.+. |...++++|..|.|+.+...
T Consensus 137 ~~~nDvavD~~GnaYVt~s~~~~~-I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 137 FGVVQSAQDRDGNSYVAFALGMPA-IARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEEEEECTTSCEEEEEEESSCE-EEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred cCCceeEECCCCCEEEeCCCCCCe-EEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 3577777643 3588877766 44 78999987767665544321 123455555 34589999998889988754
No 254
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=23.86 E-value=4.2e+02 Score=24.17 Aligned_cols=105 Identities=11% Similarity=-0.067 Sum_probs=55.0
Q ss_pred eEEEee--eCCceEEEE-eC--CeEEEEeeCCCCccceeeeeeeccceEEEEE--EEeCCEEEEeecCCcEEEEEEEccC
Q 014962 189 VLAICP--YLDRYFLAS-AG--NAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL--TAHFTRIAVGDCRDGILFYSYHEDA 261 (415)
Q Consensus 189 V~al~~--~~g~yLl~~-vg--~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI--~~~~n~IlVGD~~~Sv~ll~y~~~~ 261 (415)
+.+|+- -.|+ |.++ .+ .+|+.+++... ..+....... .....| +..+++|++.|....- +.+++.+.
T Consensus 122 P~~iavdp~~g~-ly~~d~~~~~~I~~~~~dG~---~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg 195 (316)
T 1ijq_A 122 PRAIVVDPVHGF-MYWTDWGTPAKIKKGGLNGV---DIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG 195 (316)
T ss_dssp EEEEEEETTTTE-EEEEECSSSCEEEEEETTSC---CEEEEECSSC-SCEEEEEEETTTTEEEEEETTTTE-EEEEETTS
T ss_pred cceEEeCCCCCE-EEEEccCCCCeEEEEcCCCC---CeEEEEECCC-CCceEEEEeccCCEEEEEECCCCe-EEEEecCC
Confidence 344443 4555 5544 44 46777777542 1222111111 134444 4458899999987542 45566655
Q ss_pred CeEEEEecC-CCcceeEEEEeeeCCeEEEeCCCCc-EEEEe
Q 014962 262 RKLEQIYCD-PSQRLVADCVLMDVDTAVVSDRKGS-IAVLS 300 (415)
Q Consensus 262 ~~L~~varD-~~~~~vta~~~Ld~d~~l~aD~~gN-l~vl~ 300 (415)
.....++.. ....+...+.+ +++.+..+|...+ |+.+.
T Consensus 196 ~~~~~~~~~~~~~~~P~giav-~~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 196 GNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp CSCEEEEECTTTTSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CceEEEeecCCccCCcEEEEE-ECCEEEEEECCCCeEEEEe
Confidence 444445443 22334445544 6788888886544 44444
No 255
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=22.59 E-value=2.6e+02 Score=27.11 Aligned_cols=73 Identities=14% Similarity=0.180 Sum_probs=48.3
Q ss_pred eeEEEEeCCCccCEEEEecCCCEEEEEEEeeCCCcceeeEEEEe--CCC---CcEEEEEeCCCC-CeEEEEEEEEECC-e
Q 014962 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVD--PLS---GSVLSSFKLELG-ETGKSMELVRVGH-E 79 (415)
Q Consensus 7 ~~i~~i~L~~tp~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d--~~t---~~~i~s~~l~~~-E~~~si~~~~l~~-~ 79 (415)
--+|+++|+.+|.-++++++.+.+.|.+-+ . -|.-++ |.+ .+.+..+....- .-+..|....-.+ +
T Consensus 171 ~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd------~-GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 171 KKVRAFKMNSQTEGMAADDEYGRLYIAEED------E-AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK 243 (355)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEETT------T-EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC
T ss_pred eEEEEecCCCCcceEEEcCCCCeEEEeccc------c-eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC
Confidence 357999999999999999999998888632 2 277788 443 556665543321 2355555443333 3
Q ss_pred eEEEEee
Q 014962 80 QVLVVGT 86 (415)
Q Consensus 80 ~~lvVGT 86 (415)
.|++|..
T Consensus 244 gyLivSs 250 (355)
T 3amr_A 244 GYLMASS 250 (355)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 5888765
No 256
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=21.86 E-value=6.1e+02 Score=27.09 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=31.9
Q ss_pred EEEEeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecCCcEEEEEEEcc
Q 014962 200 FLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHED 260 (415)
Q Consensus 200 Ll~~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~ 260 (415)
|+.+....|+.+++...+ ...+.........+.+...+++|++.|..... +++++..
T Consensus 398 Ll~an~~~Ir~i~l~~~~---~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~-I~~~~l~ 454 (791)
T 3m0c_C 398 LFFTNRHEVRKMTLDRSE---YTSLIPNLRNVVALDTEVASNRIYWSDLSQRM-ICSTQLD 454 (791)
T ss_dssp EEEECBSSEEEECTTSCC---CEEEECSCSSEEEEEEETTTTEEEEEETTTTE-EEEEEC-
T ss_pred cccccccceeEeeccCCc---ceeeecCCCceEEEeecccCCeeEEeecccee-EEEEecc
Confidence 777777778777776421 22212112223444445567899999987653 3444443
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=21.05 E-value=6.8e+02 Score=25.62 Aligned_cols=47 Identities=11% Similarity=0.111 Sum_probs=36.2
Q ss_pred EEEEecCCCEEEEEEEee---------CCCcceeeEEEEeCCCCcEEEEEeCCCCC
Q 014962 20 KVLYHSESRLLIVMRTEL---------NNDTCSSDICCVDPLSGSVLSSFKLELGE 66 (415)
Q Consensus 20 ~I~y~~~~~~~~v~~~~~---------~~~~~~s~i~l~d~~t~~~i~s~~l~~~E 66 (415)
-++|+++.+++++.+... .++.+.++|.-+|+.|++.+..|+..++.
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 468888888887776543 12345678999999999999999988764
No 258
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=20.81 E-value=6e+02 Score=24.91 Aligned_cols=93 Identities=5% Similarity=-0.021 Sum_probs=54.9
Q ss_pred EeCCeEEEEeeCCCCccceeeeeeeccceEEEEEEEeCCEEEEeecC--CcEEEEEEEccCCeEEEEecCCCcceeEEEE
Q 014962 203 SAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCR--DGILFYSYHEDARKLEQIYCDPSQRLVADCV 280 (415)
Q Consensus 203 ~vg~~l~v~~~~~~~~~~L~~~a~~~~~~~i~sI~~~~n~IlVGD~~--~Sv~ll~y~~~~~~L~~varD~~~~~vta~~ 280 (415)
+....+.+|++... .++....... .-......|.+|+.+... ..-.++.++.+.+++..+... ..++.+..
T Consensus 129 ~~~~~~~l~d~~~g---~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~--~~~~~~~~ 201 (582)
T 3o4h_A 129 ATEDRVALYALDGG---GLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG--EGSFSSAS 201 (582)
T ss_dssp ECSSCEEEEEEETT---EEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS--SCEEEEEE
T ss_pred cCCCCceEEEccCC---cEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC--CCccccce
Confidence 34455778988642 2333222221 344566789988854433 224577888777777666433 34566777
Q ss_pred eeeC-CeEEEeCCCC--cEEEEecC
Q 014962 281 LMDV-DTAVVSDRKG--SIAVLSCS 302 (415)
Q Consensus 281 ~Ld~-d~~l~aD~~g--Nl~vl~~~ 302 (415)
|-.+ ..++.++.+| +|+++...
T Consensus 202 ~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 202 ISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp ECTTSCEEEEEECSSCEEEEEECTT
T ss_pred ECCCCCEEEEccCCCeeEEEEEcCC
Confidence 7544 4666788888 67766643
No 259
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=20.79 E-value=7e+02 Score=25.63 Aligned_cols=79 Identities=9% Similarity=0.044 Sum_probs=45.4
Q ss_pred cCEEEEecCCCEEEEEEEeeCCCcceeeEEEEeCCCCcEEEEEeCCCCCeEEEEEE--EEEC-CeeEEEEeeecCCCCCC
Q 014962 18 PKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGETGKSMEL--VRVG-HEQVLVVGTSLSSGPAI 94 (415)
Q Consensus 18 p~~I~y~~~~~~~~v~~~~~~~~~~~s~i~l~d~~t~~~i~s~~l~~~E~~~si~~--~~l~-~~~~lvVGT~~~~~~~~ 94 (415)
-..+.++|+.+.++. . + ..|.+.|..|++....+.-...... ++.. +.+. +..+|+.++....
T Consensus 19 ~~~~~w~~dg~~~~~-~-~-------~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Spdg~~l~~~~~~~~---- 84 (740)
T 4a5s_A 19 LYSLRWISDHEYLYK-Q-E-------NNILVFNAEYGNSSVFLENSTFDEF-GHSINDYSISPDGQFILLEYNYVK---- 84 (740)
T ss_dssp CCCEEECSSSEEEEE-E-T-------TEEEEEETTTCCEEEEECTTTTTTC-CSCCCEEEECTTSSEEEEEEEEEE----
T ss_pred ccccEECCCCcEEEE-c-C-------CcEEEEECCCCceEEEEechhhhhh-cccccceEECCCCCEEEEEECCee----
Confidence 346788888754433 2 1 3699999998886554444333221 1111 3443 5578888776321
Q ss_pred CCCCCccccccEEEEEEEE
Q 014962 95 MPSGEAESTKGRLIVLCIE 113 (415)
Q Consensus 95 ~~~~e~~~~~Gri~vf~i~ 113 (415)
.-.....|.++++++.
T Consensus 85 ---~~r~~~~~~~~~~d~~ 100 (740)
T 4a5s_A 85 ---QWRHSYTASYDIYDLN 100 (740)
T ss_dssp ---CSSSCEEEEEEEEETT
T ss_pred ---eEEEccceEEEEEECC
Confidence 1112446888888876
No 260
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=20.67 E-value=7.9e+02 Score=26.21 Aligned_cols=106 Identities=13% Similarity=-0.008 Sum_probs=56.5
Q ss_pred eEEEe--eeCCceEEEEe-C--CeEEEEeeCCCCccceeeeeeec-cceEEEEEEEeCCEEEEeecCCcEEEEEEEccCC
Q 014962 189 VLAIC--PYLDRYFLASA-G--NAFYVCGFPNDNPQRVRRFAVGR-TRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDAR 262 (415)
Q Consensus 189 V~al~--~~~g~yLl~~v-g--~~l~v~~~~~~~~~~L~~~a~~~-~~~~i~sI~~~~n~IlVGD~~~Sv~ll~y~~~~~ 262 (415)
+.+|+ +..|+ |..+- | ++|.+.++.... .+...... .....+.|+..+++|++.|.... .+.+++.+..
T Consensus 516 P~gIaVDp~~g~-LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~-~I~~~d~dG~ 590 (791)
T 3m0c_C 516 PRAIVVDPVHGF-MYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH-SISSIDVNGG 590 (791)
T ss_dssp EEEEEEETTTTE-EEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSC
T ss_pred cceEEEecCCCC-EEEecCCCCCeEEEEecCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCCCC-cEEEEecCCC
Confidence 44444 45566 66553 3 467777776421 11111111 11234445556899999997654 3456666554
Q ss_pred eEEEEecC-CCcceeEEEEeeeCCeEEEeCCCCc-EEEEe
Q 014962 263 KLEQIYCD-PSQRLVADCVLMDVDTAVVSDRKGS-IAVLS 300 (415)
Q Consensus 263 ~L~~varD-~~~~~vta~~~Ld~d~~l~aD~~gN-l~vl~ 300 (415)
....+... ....+..++.+ +++.+..+|...+ |+.+.
T Consensus 591 ~~~~v~~~~~~l~~P~glav-~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 591 NRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp SCEEEEECTTTTSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred ceEEEecCCCccCCCCEEEE-eCCEEEEEECCCCEEEEEe
Confidence 44444433 22234445544 6778888886544 55554
Done!