Query 014965
Match_columns 415
No_of_seqs 147 out of 174
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 04:17:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014965.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014965hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 93.3 0.22 7.4E-06 43.7 7.4 119 223-359 87-215 (255)
2 3f1y_A Mannosyl-3-phosphoglyce 91.3 0.73 2.5E-05 45.6 9.2 193 148-359 93-310 (387)
3 2d7i_A Polypeptide N-acetylgal 89.9 1.5 5.1E-05 44.9 10.3 211 148-362 111-342 (570)
4 2ffu_A Ppgalnact-2, polypeptid 89.9 1.6 5.3E-05 43.4 10.2 138 222-361 144-293 (501)
5 1xhb_A Polypeptide N-acetylgal 89.4 0.64 2.2E-05 45.5 6.9 138 223-362 113-262 (472)
6 2z86_A Chondroitin synthase; G 82.9 12 0.0004 37.9 12.3 189 148-358 374-572 (625)
7 2nxv_A ATP synthase subunits r 73.9 5.3 0.00018 36.0 6.0 29 223-251 73-101 (249)
8 2z86_A Chondroitin synthase; G 68.2 2.3 7.8E-05 43.1 2.4 210 148-362 92-334 (625)
9 3bcv_A Putative glycosyltransf 64.6 4.7 0.00016 34.7 3.4 108 148-260 4-120 (240)
10 4fix_A UDP-galactofuranosyl tr 64.6 11 0.00037 39.9 6.8 132 224-358 268-417 (657)
11 1omz_A Alpha-1,4-N-acetylhexos 54.9 23 0.00078 34.6 6.7 103 148-252 27-134 (293)
12 2bo4_A Mannosylglycerate synth 47.2 16 0.00054 36.5 4.3 183 151-351 2-210 (397)
13 3l7i_A Teichoic acid biosynthe 31.6 9.9 0.00034 39.8 0.0 34 223-256 82-115 (729)
14 4hg6_A Cellulose synthase subu 31.5 33 0.0011 36.8 4.0 124 223-358 237-368 (802)
15 2ls4_A High affinity copper up 34.5 12 0.00041 24.6 0.0 15 32-46 5-19 (26)
16 2c0n_A A197; thermophil protei 25.2 25 0.00084 33.0 1.4 38 212-256 44-84 (203)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=93.26 E-value=0.22 Score=43.68 Aligned_cols=119 Identities=10% Similarity=-0.037 Sum_probs=67.8
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHh-CCcccCCCcc-----CCCCcceeeeeecCCcceeeeeccCCCCCCCCCC
Q 014965 223 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKH-GLEISQPGLE-----PNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHL 296 (415)
Q Consensus 223 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPALd-----~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ 296 (415)
+..|||++.|+|..++.-.++++++.++++ +..+..+... .+....+.. . .+...+..
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-------------- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKET-V-RPAAQVTW-------------- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEE-E-ECCCSCBS--------------
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhc-c-CchHHHHH--------------
Confidence 578999999999999988899999999876 6666555432 111110000 0 00000000
Q ss_pred CCcccEEEeccccccHHHHHHhh-hh---hcCCCcceehhhHhhhHhhcCCCCeEEEEeeeeeeecc
Q 014965 297 PPCAAFVEIMAPVFSRDAWRCVW-HM---IQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQT 359 (415)
Q Consensus 297 ppcT~FVEiMAPVFSR~Awrcvw-~m---iqNDLvhGWGLDf~w~~c~~~~~~kIGVVDa~~VvH~g 359 (415)
....++-..+-+|+|++++.+- .+ +..+.....+-|+.+...+... .++..++...+.|+.
T Consensus 151 -~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~-g~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 -NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YPFYPLDEELDLNYI 215 (255)
T ss_dssp -CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT-CCBEEEEEEEEEEEE
T ss_pred -hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh-CCEEEecCcEEEEEE
Confidence 0011222234579999998774 33 1112222345676665444333 369999998888864
No 2
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=91.32 E-value=0.73 Score=45.59 Aligned_cols=193 Identities=13% Similarity=0.050 Sum_probs=98.8
Q ss_pred CCceEEEEEeccccccchHHHHhcc-------CCCcEEEEEEECCCCCcccccccCCcceEEEE--------eccccccc
Q 014965 148 QPKYLVTFTVGYDQKNNINAAIKKF-------SDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSV--------RKQTKWWY 212 (415)
Q Consensus 148 ~~kyLva~~VG~kqk~~Vd~~v~kf-------~~nFdv~LfhYDG~v~~W~d~~Ws~~aihv~~--------~kqtKWw~ 212 (415)
.++..|.+++= +...++..+++.. +.+|.|++ .=||+.|+=.+.-=.-.+..+.. .+++|-.-
T Consensus 93 ~p~vSVVIP~y-Ne~~~l~~~l~sl~~~l~~~~~~~EIIV-VDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSR-NVADTVGGIIDEIHALNERAPLIDQILV-VDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEES-SCTTTHHHHHHHHHHHHHHSCCCSEEEE-EECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcC-CCHHHHHHHHHHHHHHHhcCCCCeEEEE-EcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 46788888884 4456666655543 35787775 45788764322110001111111 13333222
Q ss_pred cccccCcccccCccEEEEecCccc-cCCCCHHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeee----cc
Q 014965 213 AKRFLHPDIVASYDYIFIWDEDLG-VEHFNAEEYIKLVRKH-GLEISQPGLEPNKGLTWQMTKRRGDREVHKET----EE 286 (415)
Q Consensus 213 akRFLHPdiv~~YDYIflwDDDL~-vd~f~i~ryf~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~----~~ 286 (415)
.+.-+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+................ +.....+-+.. ..
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~-~~~~g~v~~~~~~~l~~ 246 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIE-EDGGGRVTELTAKPLFN 246 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------C-CBCCSHHHHHTHHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccc-cccCCchhhhhHHHHHH
Confidence 22212 1257999999999999 8999999999988765 56655543321100000000 11111110000 00
Q ss_pred --CCCCCCCCCCCCcccEEEeccccccHHHHHHhhhhhcCCCcceehhhHhhh-HhhcC-CCCeEEEEeeeeeeecc
Q 014965 287 --KPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALR-KCVEP-AHEKIGVVDSQWIVHQT 359 (415)
Q Consensus 287 --~~g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~w~-~c~~~-~~~kIGVVDa~~VvH~g 359 (415)
.+..+ ... -|.++|. +|+|++++.+ .+ ..|||.|..+. +++.. .-++|.=|+-.+..|..
T Consensus 247 ~~~~~l~-~~~-d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 247 LFYPELA-GFV-QPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp HHCGGGT-TCS-CTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred HHhHhhc-ccc-ccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 00000 001 1223332 6999999876 43 26899997654 44332 22358888888888853
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=89.93 E-value=1.5 Score=44.91 Aligned_cols=211 Identities=12% Similarity=0.092 Sum_probs=101.9
Q ss_pred CCceEEEEEeccccccc----hHHHHhccCCCc--EEEEEEECCCCCcc-cc-c-cc--CCcceEEEEeccccccccccc
Q 014965 148 QPKYLVTFTVGYDQKNN----INAAIKKFSDNF--TIVLFHYDGRTTEW-NE-F-EW--SKRAIHVSVRKQTKWWYAKRF 216 (415)
Q Consensus 148 ~~kyLva~~VG~kqk~~----Vd~~v~kf~~nF--dv~LfhYDG~v~~W-~d-~-~W--s~~aihv~~~kqtKWw~akRF 216 (415)
.|+.-|.+++=...... |+.+++.-..++ .|+| .=||+.++- .+ + ++ ...-|+|...... .-++...
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIV-VDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~~A~ 188 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVL-VDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLIRTR 188 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEE-EECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEE-EECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHHHHH
Confidence 45677777774433133 334443323444 6665 456776643 11 1 01 0113444432211 1122211
Q ss_pred cCcccccCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecC-Cccee-eeeccCC
Q 014965 217 LHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNK--GLTWQMT----KRRG-DREVH-KETEEKP 288 (415)
Q Consensus 217 LHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~-~~~vH-r~~~~~~ 288 (415)
..-=-.+..|||++.|+|..++.-.++++++.+++..-.+..|.++.-. .+.+... .+.. ...+. ++.....
T Consensus 189 N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (570)
T 2d7i_A 189 MLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPP 268 (570)
T ss_dssp HHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCT
T ss_pred HHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccch
Confidence 1111235789999999999999999999999988765445555442111 1111100 0000 00000 0000000
Q ss_pred C-CCCCCCCCCcccEEEeccccccHHHHHHhhhhhcCCCccee-hhhHhhhHhhcCCCCeEEEEeeeeeeecccCc
Q 014965 289 G-WCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDSQWIVHQTVPS 362 (415)
Q Consensus 289 g-~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGW-GLDf~w~~c~~~~~~kIGVVDa~~VvH~gvPt 362 (415)
. .-.++..+--+.++-..+-+|+|++|+.+=.+ . +....| |=|+-+..-+.....+|.++....|.|.....
T Consensus 269 ~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-D-e~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 269 ELQKADPSDPFESPVMAGGLFAVDRKWFWELGGY-D-PGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp TTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSS-C-TTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred hhhccCCCcceecccccceEEEEEHHHHHhcCCC-C-CcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence 0 00000111111122222347999999888443 3 334567 45665554443356799999999999964443
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=89.92 E-value=1.6 Score=43.41 Aligned_cols=138 Identities=11% Similarity=0.109 Sum_probs=75.0
Q ss_pred ccCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCCC--Ccceeeee---ecC-CcceeeeeccCC-----CC
Q 014965 222 VASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNK--GLTWQMTK---RRG-DREVHKETEEKP-----GW 290 (415)
Q Consensus 222 v~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~S--~ish~iT~---R~~-~~~vHr~~~~~~-----g~ 290 (415)
.+..|||++.|+|..++.-.++++++.+++..-.+..|.++.-. .+.+.-.. +.. ...++......+ ..
T Consensus 144 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (501)
T 2ffu_A 144 AAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSR 223 (501)
T ss_dssp HCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHT
T ss_pred hcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhc
Confidence 35789999999999999999999999999887777777653211 11110000 000 000000000000 00
Q ss_pred CCCCCCCCcccEEEeccccccHHHHHHhhhhhcCCCccee-hhhHhhhHhhcCCCCeEEEEeeeeeeecccC
Q 014965 291 CSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDSQWIVHQTVP 361 (415)
Q Consensus 291 C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGW-GLDf~w~~c~~~~~~kIGVVDa~~VvH~gvP 361 (415)
-.++..+-.+.++-..+=+|+|+++..+=.+ . +....| |=|+-+..-+.....+|.++....|.|..+.
T Consensus 224 ~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-d-e~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~ 293 (501)
T 2ffu_A 224 QGNPVAPIKTPMIAGGLFVMDKFYFEELGKY-D-MMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK 293 (501)
T ss_dssp SSCTTSCEECSSCCSSSEEEEHHHHHHTTCC-C-TTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCS
T ss_pred cCCCCCcccCccccceEEEEEHHHHHHhCCC-C-ccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccC
Confidence 0001111011111122348999999888543 2 333567 5565554333334579999999999996443
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=89.37 E-value=0.64 Score=45.49 Aligned_cols=138 Identities=11% Similarity=0.067 Sum_probs=71.3
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCC--CCccee----eeeecCCcceeeeeccCCC-----CC
Q 014965 223 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPN--KGLTWQ----MTKRRGDREVHKETEEKPG-----WC 291 (415)
Q Consensus 223 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~--S~ish~----iT~R~~~~~vHr~~~~~~g-----~C 291 (415)
+..|||++.|+|..++.-.++++++.+++..-.+..|.++.- ..+.+. .....-...++......+. .-
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK 192 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence 568999999999999999999999999887765666654311 111110 0000000000000000000 00
Q ss_pred CCCCCCCcccEEEeccccccHHHHHHhhhhhcCCCcceeh-hhHhhhHhhcCCCCeEEEEeeeeeeecccCc
Q 014965 292 SNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDSQWIVHQTVPS 362 (415)
Q Consensus 292 ~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~w~~c~~~~~~kIGVVDa~~VvH~gvPt 362 (415)
.+...+-.+.++-..+=+|+|++|+.+=.+ ..+ ...|| =|+-+..-+.....+|.++....|.|....+
T Consensus 193 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-de~-~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 193 GDRTLPVRTPTMAGGLFSIDRDYFQEIGTY-DAG-MDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp TCTTSCEECSBCCSSSEEEEHHHHHHTTSC-CTT-SCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred CCCCCcccCccccceeEEEEHHHHHHcCCC-CCc-ccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence 000111111111122336899999887543 223 34664 3444443333345799999999999965543
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=82.87 E-value=12 Score=37.92 Aligned_cols=189 Identities=14% Similarity=0.123 Sum_probs=90.3
Q ss_pred CCceEEEEEeccccccchHHHHhcc----CCCcEEEEEEECCCCCcccc-c-cc---CCcceEEEEeccccccccccccC
Q 014965 148 QPKYLVTFTVGYDQKNNINAAIKKF----SDNFTIVLFHYDGRTTEWNE-F-EW---SKRAIHVSVRKQTKWWYAKRFLH 218 (415)
Q Consensus 148 ~~kyLva~~VG~kqk~~Vd~~v~kf----~~nFdv~LfhYDG~v~~W~d-~-~W---s~~aihv~~~kqtKWw~akRFLH 218 (415)
.++.-|.+++ ++....+.+.++-. -.+|.|++.. ||+.|+=.+ + ++ ..+...+...++++-.....-+
T Consensus 374 ~~~vsiii~~-yn~~~~l~~~l~s~~~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~- 450 (625)
T 2z86_A 374 VPLVSIYIPA-YNCSKYIVRCVESALNQTITDLEVCICD-DGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV- 450 (625)
T ss_dssp SCSEEEEEEE-SSCTTTHHHHHHHHHSSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH-
T ss_pred CCeEEEEEeC-CCCHHHHHHHHHHHHhCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH-
Confidence 4556666665 44455666655543 2578887665 476653111 1 11 1122333323333221111111
Q ss_pred cccccCccEEEEecCccccCCCCHHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeeccCCCCCCCCCCC
Q 014965 219 PDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKH-GLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLP 297 (415)
Q Consensus 219 Pdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~p 297 (415)
-.+..|||++.|+|..++.-.++++++.+++. +..+..+... .....+..+.. ....+..-.+. .
T Consensus 451 --~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~-~- 516 (625)
T 2z86_A 451 --RLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNR---------NIDREGNLISN-GYNWPIYSREK-L- 516 (625)
T ss_dssp --HHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEE---------EECTTSCEEEE-CCCCSSCCHHH-H-
T ss_pred --HhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeE---------EECCCCCEecc-CcccccCCHHH-H-
Confidence 12578999999999999888888888777543 3333333211 00001111110 00000000000 0
Q ss_pred CcccEEEeccccccHHHHHHhhhhhcCCCcceehhhHhhhHhhcCCCCeEEEEeeeeeeec
Q 014965 298 PCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQ 358 (415)
Q Consensus 298 pcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~w~~c~~~~~~kIGVVDa~~VvH~ 358 (415)
..+++-..+-+|+|++|..+-.+ ..++. .+-|+.+..-+.... ++..++...+.|+
T Consensus 517 -~~~~~~~~~~~~~r~~~~~~ggf-d~~~~--~~eD~dl~~r~~~~g-~~~~~~~~~~~~r 572 (625)
T 2z86_A 517 -TSAMICHHFRMFTARAWNLTEGF-NESIS--NAVDYDMYLKLSEVG-PFKHINKICYNRV 572 (625)
T ss_dssp -TTSCCCCSCEEEEHHHHTTTTCC-CSSCS--SCHHHHHHHHHTTTS-CEEEEEEEEEEEE
T ss_pred -hhcccCCceEEEEHHHHHHhCCC-CCccC--ChHHHHHHHHHHHhC-CEEEeCCcEEEEE
Confidence 00111112237899998776443 33332 456776653333233 8999988766653
No 7
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=73.91 E-value=5.3 Score=35.98 Aligned_cols=29 Identities=10% Similarity=0.268 Sum_probs=26.5
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHH
Q 014965 223 ASYDYIFIWDEDLGVEHFNAEEYIKLVRK 251 (415)
Q Consensus 223 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~ 251 (415)
+.-|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 46899999999999999899999999887
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=68.17 E-value=2.3 Score=43.09 Aligned_cols=210 Identities=14% Similarity=0.189 Sum_probs=101.6
Q ss_pred CCceEEEEEeccccccchHHHHhcc-----CCCcEEEEEEECCCCCcccc-c-ccCC-cceEEEEeccccccccccccCc
Q 014965 148 QPKYLVTFTVGYDQKNNINAAIKKF-----SDNFTIVLFHYDGRTTEWNE-F-EWSK-RAIHVSVRKQTKWWYAKRFLHP 219 (415)
Q Consensus 148 ~~kyLva~~VG~kqk~~Vd~~v~kf-----~~nFdv~LfhYDG~v~~W~d-~-~Ws~-~aihv~~~kqtKWw~akRFLHP 219 (415)
.++.-|.+++= +....+...++.. +.++.|++.. ||..++=.+ + ++.+ ..+++........-.+...-+-
T Consensus 92 ~p~vsviIp~~-n~~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g 169 (625)
T 2z86_A 92 IDGLSIVIPTY-NRAKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG 169 (625)
T ss_dssp CCCEEEEEEES-SCHHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred CCcEEEEEecC-CcHHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence 45667777763 3344555555443 2478887665 677654221 1 1111 1244443332221111111001
Q ss_pred ccccCccEEEEecCccccCCCCHHHHHHHHHHhC-CcccCCCccCCC-Cccee--e----eeec-CC----cceeeeecc
Q 014965 220 DIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHG-LEISQPGLEPNK-GLTWQ--M----TKRR-GD----REVHKETEE 286 (415)
Q Consensus 220 div~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~g-LeISQPALd~~S-~ish~--i----T~R~-~~----~~vHr~~~~ 286 (415)
=-.+.+|||++.|+|..++.-.+.++++.+++.. .-+.+|-..... ...+. . ..+. +. ..+......
T Consensus 170 ~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (625)
T 2z86_A 170 LRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQ 249 (625)
T ss_dssp HHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------------
T ss_pred HHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhcc
Confidence 1125799999999999999999999999988643 344444321111 10000 0 0000 00 000000000
Q ss_pred --CCCC------CCC---CCCCCcccEEEeccccccHHHHHHhhhhhcCCCcceeh-hhHhhhHhhcCCCCeEEEEeeee
Q 014965 287 --KPGW------CSN---PHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDSQW 354 (415)
Q Consensus 287 --~~g~------C~~---~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~w~~c~~~~~~kIGVVDa~~ 354 (415)
...| +.+ ....+ ..++=..+-+|+|++|+.+=.+ ..++ ..|| =|+-+..-+.....++..++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~rr~~l~~iGgf-de~~-~~~g~ED~dl~~Rl~~~G~~i~~~p~~~ 326 (625)
T 2z86_A 250 NKSVDWRIEHFKNTDNLRLCNTP-FRFFSGGNVAFAKKWLFRAGWF-DEEF-THWGGEDNEFGYRLYREGCYFRSVEGAM 326 (625)
T ss_dssp --CCCTHHHHHHHTTTTTTCSCG-GGGCCTTEEEEETHHHHHHCCC-CTTC-SSCCCHHHHHHHHHHHTTCEEEECGGGC
T ss_pred CCccccchhhhcccccccccCCc-eeEEeeceeeeEHHHHHHhCCC-cccc-ccCCcchhhhhhhHHhCCceEEEcccch
Confidence 0000 000 00111 1233334558999999887433 3343 4664 66666543333457999999999
Q ss_pred eeecccCc
Q 014965 355 IVHQTVPS 362 (415)
Q Consensus 355 VvH~gvPt 362 (415)
+.|...+.
T Consensus 327 v~H~~~~~ 334 (625)
T 2z86_A 327 AYHQEPPG 334 (625)
T ss_dssp EEEECCC-
T ss_pred hhccCCcc
Confidence 99975443
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=64.58 E-value=4.7 Score=34.66 Aligned_cols=108 Identities=17% Similarity=0.199 Sum_probs=60.2
Q ss_pred CCceEEEEEeccccccchHHHHhcc----CCCcEEEEEEECCCCCccccc--ccC--CcceEEEE-eccccccccccccC
Q 014965 148 QPKYLVTFTVGYDQKNNINAAIKKF----SDNFTIVLFHYDGRTTEWNEF--EWS--KRAIHVSV-RKQTKWWYAKRFLH 218 (415)
Q Consensus 148 ~~kyLva~~VG~kqk~~Vd~~v~kf----~~nFdv~LfhYDG~v~~W~d~--~Ws--~~aihv~~-~kqtKWw~akRFLH 218 (415)
.++.-|.+++ ++..+.+.+.++-. ..+|.|++. =||..|+=.+. ++. ..-+++.. .++++=.-...=+
T Consensus 4 ~p~vsViIp~-yn~~~~l~~~l~Sl~~q~~~~~eiIvv-Dd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~a~N~g~- 80 (240)
T 3bcv_A 4 IPKVSVIVPI-YNVEKYLDQCVQALLAQTLSDIEIILI-DDESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGL- 80 (240)
T ss_dssp CCSEEEEEEE-SSCTTTHHHHHHHHHTCSSSSEEEEEE-ECCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHHH-
T ss_pred CCcEEEEEec-CCCHHHHHHHHHHHHhCcCCCeEEEEE-ECCCCcCHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHH-
Confidence 3456666766 34345555555433 257887754 46776531110 010 01133332 2222111001111
Q ss_pred cccccCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCC
Q 014965 219 PDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPG 260 (415)
Q Consensus 219 Pdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPA 260 (415)
-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 81 --~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 81 --DVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp --HHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred --HHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 1256899999999999999999999999998777766544
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=64.57 E-value=11 Score=39.85 Aligned_cols=132 Identities=11% Similarity=-0.080 Sum_probs=69.3
Q ss_pred CccEEEEecCccccCCCCHHHHHHHHHHh-CCcccCCCcc-CCC-Cccee--eeeecCCcceee--------eeccCCCC
Q 014965 224 SYDYIFIWDEDLGVEHFNAEEYIKLVRKH-GLEISQPGLE-PNK-GLTWQ--MTKRRGDREVHK--------ETEEKPGW 290 (415)
Q Consensus 224 ~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPALd-~~S-~ish~--iT~R~~~~~vHr--------~~~~~~g~ 290 (415)
.||||++.|+|..++...++++++.++.. ...+..|.+- .+. ..-|. -........... .....+-.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 68999999999999999999999999876 3445554332 111 00000 000000000000 00000000
Q ss_pred -----CCCCCCCCcccEEEeccccccHHHHHHhhhhhcCCCcceehhhHhhhHhhcCCCCeEEEEeeeeeeec
Q 014965 291 -----CSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQ 358 (415)
Q Consensus 291 -----C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~w~~c~~~~~~kIGVVDa~~VvH~ 358 (415)
+...+.+..+.++-..+-+|+|++++.+=.+. +. -.++=|.-|..-+.....++..+....|.|.
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd--~~-F~~~ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL--PL-FIKWDDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC--SC-SSSSHHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCCCh--hH-hccCcHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 00000011112222223578999998874432 22 2334676666544445679999999999994
No 11
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=54.86 E-value=23 Score=34.57 Aligned_cols=103 Identities=10% Similarity=0.106 Sum_probs=61.7
Q ss_pred CCceEEEEEeccccccchHHHHhccC--CCcEEEEEEECCCCCccccccc---CCcceEEEEeccccccccccccCcccc
Q 014965 148 QPKYLVTFTVGYDQKNNINAAIKKFS--DNFTIVLFHYDGRTTEWNEFEW---SKRAIHVSVRKQTKWWYAKRFLHPDIV 222 (415)
Q Consensus 148 ~~kyLva~~VG~kqk~~Vd~~v~kf~--~nFdv~LfhYDG~v~~W~d~~W---s~~aihv~~~kqtKWw~akRFLHPdiv 222 (415)
..++-+.|-+- +....+.++|+..+ +.-+=+++..-.....--+..| +..++.|....+.+=-.-.||+- .-.
T Consensus 27 ~~~FTvvi~ty-~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p-~~~ 104 (293)
T 1omz_A 27 LDSFTLIMQTY-NRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQV-FPE 104 (293)
T ss_dssp TTCEEEEEEES-SCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSC-CTT
T ss_pred CCceEEEEEee-cccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCC-Ccc
Confidence 34666666554 34555666676554 4555455555332111112224 22244555555555456778873 333
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHh
Q 014965 223 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKH 252 (415)
Q Consensus 223 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~ 252 (415)
-.-|+||..|||+.++..+++.=|++-+++
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 458999999999999999999888887654
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=47.23 E-value=16 Score=36.50 Aligned_cols=183 Identities=12% Similarity=0.022 Sum_probs=93.5
Q ss_pred eEEEEEeccccccchHHHHhcc-----CCCcEEEEEEECCCCCcccc-cc---------cCCcceEEEEe-----ccccc
Q 014965 151 YLVTFTVGYDQKNNINAAIKKF-----SDNFTIVLFHYDGRTTEWNE-FE---------WSKRAIHVSVR-----KQTKW 210 (415)
Q Consensus 151 yLva~~VG~kqk~~Vd~~v~kf-----~~nFdv~LfhYDG~v~~W~d-~~---------Ws~~aihv~~~-----kqtKW 210 (415)
++|.+|+ .+ +++..+++.. ..++.|+ +.=||++|+=.+ .+ ...+.+....+ +.+|=
T Consensus 2 slVIiP~-~e--E~I~~vl~~l~~~~~~~~~EII-VVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF-KH--EHPEVLLHNVRVAAAHPRVHEV-LCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC-CS--SCHHHHHHHHHHHHHSTTCCEE-EEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC-Cc--cCHHHHHHHHHHhccCCCeEEE-EEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 5777886 32 4677777654 2468876 455788774211 11 11122333222 34442
Q ss_pred cccccccCcc-cccCccEEEEecCccc-cCCCCHHHHHHHHHHhCCcccCCCccCC---CCcceeeeeecCCcceeeeec
Q 014965 211 WYAKRFLHPD-IVASYDYIFIWDEDLG-VEHFNAEEYIKLVRKHGLEISQPGLEPN---KGLTWQMTKRRGDREVHKETE 285 (415)
Q Consensus 211 w~akRFLHPd-iv~~YDYIflwDDDL~-vd~f~i~ryf~Ivr~~gLeISQPALd~~---S~ish~iT~R~~~~~vHr~~~ 285 (415)
.-++.=+--- -.+.+|||.+.|-|+. .+...+.++++.+++ |.++..+..... +.+.+.+ .|. .+. ..+
T Consensus 78 ~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~-~~~---ll~-~~~ 151 (397)
T 2bo4_A 78 DGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMI-TRT---GFA-LLW 151 (397)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHT-HHH---HHH-HHC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHH-HHH---HHH-HHH
Confidence 2111111000 1368999999999996 788889999987744 566555432111 1110000 000 000 000
Q ss_pred cCCCCCCCCCCCCcccEEEeccccccHHHHHHhhhhh-cCCCcceehhhHhhhHhhcCCCCeEEEEe
Q 014965 286 EKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMI-QNDLVHGWGLDFALRKCVEPAHEKIGVVD 351 (415)
Q Consensus 286 ~~~g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~mi-qNDLvhGWGLDf~w~~c~~~~~~kIGVVD 351 (415)
. --.|...+.| -++|. +|+|++++.+.... .+ ..+|||.|..+...+.....+|.-|+
T Consensus 152 ~-~~~~~~i~dp-~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 152 P-HTELSWIEQP-LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp T-TSSGGGCSCT-TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred H-HhhccccccC-CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 0 0011112222 23444 59999998764310 01 45799999888766554556777665
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=31.64 E-value=9.9 Score=39.77 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=0.0
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHhCCcc
Q 014965 223 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEI 256 (415)
Q Consensus 223 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeI 256 (415)
+..|||++.|+|-.++...++++++.++..++-+
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~ 115 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFNNTDGLI 115 (729)
T ss_dssp ----------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEE
Confidence 5789999999999998888888888877443333
No 14
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=31.46 E-value=33 Score=36.80 Aligned_cols=124 Identities=12% Similarity=0.012 Sum_probs=68.4
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHH-hCCcccCCCccCCC-C-cceeee--ee--cCCcceeeeeccC-CCCCCCC
Q 014965 223 ASYDYIFIWDEDLGVEHFNAEEYIKLVRK-HGLEISQPGLEPNK-G-LTWQMT--KR--RGDREVHKETEEK-PGWCSNP 294 (415)
Q Consensus 223 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~-~gLeISQPALd~~S-~-ish~iT--~R--~~~~~vHr~~~~~-~g~C~~~ 294 (415)
+.+|||++.|+|..++...++++++.+++ .+..+.|....... . +..... .+ .....++...... ..+
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 312 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRW---- 312 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHT----
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhc----
Confidence 47999999999999999999999998854 45665555332111 0 000000 00 0000001000000 000
Q ss_pred CCCCcccEEEeccccccHHHHHHhhhhhcCCCcceehhhHhhhHhhcCCCCeEEEEeeeeeeec
Q 014965 295 HLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQ 358 (415)
Q Consensus 295 ~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~w~~c~~~~~~kIGVVDa~~VvH~ 358 (415)
..+ ++...+-+|+|++++.+=.+ ..+ ..+=|+.+...+.....++..++...+.|.
T Consensus 313 ~~~----~~~G~~~~~Rr~al~~vGgf-~~~---~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~ 368 (802)
T 4hg6_A 313 GGA----FFCGSAAVLRRRALDEAGGF-AGE---TITEDAETALEIHSRGWKSLYIDRAMIAGL 368 (802)
T ss_dssp TCC----CCCSSSEEEEHHHHHHHTTC-CCS---SSSHHHHHHHHHHTTTCCEEECCCCCEEEC
T ss_pred CCc----eecccchhhhHHHHHHcCCc-CCC---CcchHHHHHHHHHHcCCeEEEecCCEEEec
Confidence 001 11233457999999877433 222 235788877666556678999988777773
No 15
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=34.55 E-value=12 Score=24.57 Aligned_cols=15 Identities=27% Similarity=0.603 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhhhhe
Q 014965 32 LIVTTFVGVVFGFFI 46 (415)
Q Consensus 32 ~~~~~~~~~~~gf~~ 46 (415)
+++++++|+.+|+|+
T Consensus 5 l~iavvlGa~~Gyf~ 19 (26)
T 2ls4_A 5 LCIAVAAGAGTGYFL 19 (26)
Confidence 577888888888876
No 16
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=25.22 E-value=25 Score=33.01 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=26.8
Q ss_pred ccccccCcccccCccEEEEecCc---cccCCCCHHHHHHHHHHhCCcc
Q 014965 212 YAKRFLHPDIVASYDYIFIWDED---LGVEHFNAEEYIKLVRKHGLEI 256 (415)
Q Consensus 212 ~akRFLHPdiv~~YDYIflwDDD---L~vd~f~i~ryf~Ivr~~gLeI 256 (415)
.+.+||- -..|||+++.|-| ++.+..++-|++ +.|.+|
T Consensus 44 lv~~Fl~---~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DV 84 (203)
T 2c0n_A 44 ALDMFLE---MKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDV 84 (203)
T ss_dssp HHHHHHH---CTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSE
T ss_pred HHHHHHh---cCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCE
Confidence 3455551 2469999999999 888777777777 445554
Done!