BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014967
(415 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4K9V4|LOLA_PSEF5 Outer-membrane lipoprotein carrier protein OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=lolA PE=3
SV=1
Length = 207
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 29/128 (22%)
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRTLIS 343
G+ + H+D Q++ +V +K SLW +LE+V K ++ A+ L+S
Sbjct: 68 GLFYWHTDAPQEQLMVSDGQKVSLWDPDLEQVTIKKLDQRLTQTPAL----------LLS 117
Query: 344 DDPAKIPESLG----SAGLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVKMNL 399
D +KI ES AG + + +L P RDTL++ L + + +
Sbjct: 118 GDVSKISESFDITSKEAGGVMDF---------------TLKPKTRDTLFDSLRLSFRNGM 162
Query: 400 RSRLQTVN 407
+ +Q ++
Sbjct: 163 INDMQLID 170
>sp|A7M9B2|YCF1_CUSRE Putative membrane protein ycf1 OS=Cuscuta reflexa GN=ycf1 PE=3 SV=1
Length = 1750
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 158 FLKTEV---LHSSGV--QELV--------STDMKELLRIAAADKREEFDVFLREVIRFGN 204
F+KT++ H+ G+ EL+ + K LR+ + E+D L ++ F
Sbjct: 1128 FIKTQIKDSFHTQGICKYELIQKKLQWPKTNQWKNWLRVNS-----EYD--LSHILWFSL 1180
Query: 205 LCKDPQWHNLDRYFSNLKSEYLNHRQPRGEAETRMKELTTLAQHTSELY---HEYNALDR 261
+ + +W N + K +YLN R RG + + + S+ Y ++Y+ L
Sbjct: 1181 ISQKQKWRNRVEQYHRSKEKYLNKRNSRGNYRLSDSKKQNVPKPVSDNYKKCYQYDLLSY 1240
Query: 262 FELDYRRKLEELDSLNLPRKGEGVTFLHSDL-----KQQRKLV-------RSLKKKSLWS 309
++Y +K + S + P KG+ +++ + L K +R + ++L +K L
Sbjct: 1241 KSINYAKKSASVISRSTP-KGQAISYNDNMLQNIPGKIKRLYITYIPYIGKTLDRKYLIW 1299
Query: 310 RNLEEVMEKFVEIAAYM 326
+N+ + K V+I +++
Sbjct: 1300 KNIHFYLRKKVDIESWV 1316
>sp|Q88FS9|LOLA_PSEPK Outer-membrane lipoprotein carrier protein OS=Pseudomonas putida
(strain KT2440) GN=lolA PE=3 SV=2
Length = 207
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 281 KGEGVTFLHSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRT 340
K G+ + H+D Q++ +V K +LW +LE+ K +++ A+
Sbjct: 65 KRPGLFYWHTDAPQEQVVVSDGKNVTLWDPDLEQATIKKLDVRLNQTPAL---------- 114
Query: 341 LISDDPAKIPESLGSA----GLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVK 396
L+S D +KI +S A G + + +L P +DTL++ L + +
Sbjct: 115 LLSGDVSKISQSFDIASKEQGEVMDF---------------TLKPKTKDTLFDSLRVSFR 159
Query: 397 MNLRSRLQTVN 407
L + +Q ++
Sbjct: 160 KGLINDMQLID 170
>sp|B0KLX1|LOLA_PSEPG Outer-membrane lipoprotein carrier protein OS=Pseudomonas putida
(strain GB-1) GN=lolA PE=3 SV=1
Length = 207
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 281 KGEGVTFLHSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRT 340
K G+ + H+D Q++ +V K +LW +LE+ K +++ A+
Sbjct: 65 KRPGLFYWHTDAPQEQVVVSDGKNVTLWDPDLEQATIKKLDVRLNQTPAL---------- 114
Query: 341 LISDDPAKIPESLGSA----GLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVK 396
L+S D +KI +S A G + + +L P +DTL++ L + +
Sbjct: 115 LLSGDVSKISQSFDIASKEQGEVMDF---------------TLKPKTKDTLFDSLRVSFR 159
Query: 397 MNLRSRLQTVN 407
L + +Q ++
Sbjct: 160 KGLINDMQLID 170
>sp|A5W1H3|LOLA_PSEP1 Outer-membrane lipoprotein carrier protein OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=lolA PE=3 SV=1
Length = 207
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 281 KGEGVTFLHSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRT 340
K G+ + H+D Q++ +V K +LW +LE+ K +++ A+
Sbjct: 65 KRPGLFYWHTDAPQEQVVVSDGKNVTLWDPDLEQATIKKLDVRLNQTPAL---------- 114
Query: 341 LISDDPAKIPESLGSA----GLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVK 396
L+S D +KI +S A G + + +L P +DTL++ L + +
Sbjct: 115 LLSGDVSKISQSFDIASKEQGEVMDF---------------TLKPKTKDTLFDSLRVSFR 159
Query: 397 MNLRSRLQTVN 407
L + +Q ++
Sbjct: 160 KGLINDMQLID 170
>sp|Q48H71|LOLA_PSE14 Outer-membrane lipoprotein carrier protein OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=lolA PE=3
SV=1
Length = 207
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 289 HSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRTLISDDPAK 348
H+D Q++ +V KK SLW +LE+V K ++ A+ L+S D +K
Sbjct: 73 HTDAPQEQLMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPAL----------LLSGDVSK 122
Query: 349 IPESLGSAGLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVKMNLRSRLQTVN 407
I ES A +I+ + L P +DTL++ L + + + + +Q ++
Sbjct: 123 ISESFDIT--AKEAGGVIDFV---------LKPKTKDTLFDSLRLSFRNGIINDMQLID 170
>sp|Q9Z3U0|LOLA_PSEU2 Outer-membrane lipoprotein carrier protein OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=lolA PE=3 SV=1
Length = 207
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 289 HSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRTLISDDPAK 348
H+D Q++ +V KK SLW +LE+V K ++ A+ L+S D +K
Sbjct: 73 HTDAPQEQLMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPAL----------LLSGDVSK 122
Query: 349 IPESLGSAGLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVKMNLRSRLQTVN 407
I ES A +I+ +L P +DTL++ L + + + + +Q ++
Sbjct: 123 ISESFDIT--AKEAGGVID---------FTLKPKTKDTLFDSLRLSFRNGIINDMQLID 170
>sp|Q1IBD3|LOLA_PSEE4 Outer-membrane lipoprotein carrier protein OS=Pseudomonas
entomophila (strain L48) GN=lolA PE=3 SV=1
Length = 207
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 281 KGEGVTFLHSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRT 340
K G+ + H+D Q++ +V +K +LW +LE+ K +++ A+
Sbjct: 65 KRPGLFYWHTDAPQEQVVVSDGQKVTLWDPDLEQATIKKLDVRLSQTPAL---------- 114
Query: 341 LISDDPAKIPESLGSAGLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVKMNLR 400
L+S D +KI +S I+ + +L P +DTL++ L + + L
Sbjct: 115 LLSGDVSKISQSFD-----------ISSKEQGEVTDFTLKPKTKDTLFDSLRVSFRKGLI 163
Query: 401 SRLQTVN 407
+ +Q V+
Sbjct: 164 NDMQLVD 170
>sp|Q87ZS6|LOLA_PSESM Outer-membrane lipoprotein carrier protein OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=lolA PE=3 SV=1
Length = 207
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 289 HSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRTLISDDPAK 348
H+D Q++ +V KK SLW +LE+V K ++ A+ L+S D +K
Sbjct: 73 HTDAPQEQLMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPAL----------LLSGDVSK 122
Query: 349 IPESLGSAGLALHYANIINQIDNIVSRPSSLPPNMRDTLYNGLPATVKMNLRSRLQTVN 407
I ES A +I+ + L P +DTL++ L + + + + +Q ++
Sbjct: 123 ISESFDIT--AKEAGGVIDFM---------LKPKTKDTLFDSLRLSFRNGIINDMQLID 170
>sp|B5XJU1|Y264_STRPZ UPF0348 protein Spy49_0264 OS=Streptococcus pyogenes serotype M49
(strain NZ131) GN=Spy49_0264 PE=3 SV=1
Length = 368
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKSRVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|Q5XDT3|Y295_STRP6 UPF0348 protein M6_Spy0295 OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=M6_Spy0295 PE=3
SV=1
Length = 368
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|Q1JIJ4|Y264_STRPD UPF0348 protein MGAS10270_Spy0264 OS=Streptococcus pyogenes
serotype M2 (strain MGAS10270) GN=MGAS10270_Spy0264 PE=3
SV=1
Length = 368
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|Q48V83|Y259_STRPM UPF0348 protein M28_Spy0259 OS=Streptococcus pyogenes serotype M28
(strain MGAS6180) GN=M28_Spy0259 PE=3 SV=1
Length = 368
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|Q9A1E8|Y314_STRP1 UPF0348 protein SPy_0314/M5005_Spy0267 OS=Streptococcus pyogenes
serotype M1 GN=SPy_0314 PE=3 SV=1
Length = 368
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|B1JBE3|LOLA_PSEPW Outer-membrane lipoprotein carrier protein OS=Pseudomonas putida
(strain W619) GN=lolA PE=3 SV=1
Length = 211
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 281 KGEGVTFLHSDLKQQRKLVRSLKKKSLWSRNLEEVMEKFVEIAAYMHQAILEAFGSDGRT 340
K G+ + H+D Q++ +V K +LW +LE+ K +++ A+
Sbjct: 69 KRPGLFYWHTDAPQEQVVVSDGKNVTLWDPDLEQATIKKLDVRLNQTPAL---------- 118
Query: 341 LISDDPAKIPESLGSAGLALHYANIINQIDNIVSRPS------SLPPNMRDTLYNGLPAT 394
L+S D +KI +S +I S+ +L P +DTL++ L +
Sbjct: 119 LLSGDVSKISQSF-----------------DITSKEQGEVMDFTLKPTTKDTLFDSLRVS 161
Query: 395 VKMNLRSRLQTVN 407
+ L + +Q ++
Sbjct: 162 FRRGLINDMQLID 174
>sp|Q7CNK9|Y309_STRP8 UPF0348 protein spyM18_0309 OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=spyM18_0309 PE=3 SV=1
Length = 368
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|Q1JDH1|Y285_STRPB UPF0348 protein MGAS2096_Spy0285 OS=Streptococcus pyogenes serotype
M12 (strain MGAS2096) GN=MGAS2096_Spy0285 PE=3 SV=1
Length = 368
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|Q1JNE5|Y266_STRPC UPF0348 protein MGAS9429_Spy0266 OS=Streptococcus pyogenes serotype
M12 (strain MGAS9429) GN=MGAS9429_Spy0266 PE=3 SV=1
Length = 368
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|P0DH17|Y1630_STRPQ UPF0348 protein SPs1630 OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=SPs1630 PE=3 SV=1
Length = 368
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|P0DH16|Y1630_STRP3 UPF0348 protein SpyM3_0230 OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=SpyM3_0230 PE=3 SV=1
Length = 368
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 174 STDMKELLRIAAADKRE--EFDVFLREVIRFGNLCKDPQWHNLDRYFSNLKSEYLNHR-- 229
S D LL A+A ++ ++D V G L +P + D YFS LK + LNH
Sbjct: 182 SKDKNHLLASASAIRQHLNDWDFISHSVPNAGLLINNPH-MSWDHYFSFLKYQILNHSDL 240
Query: 230 ----QPRGEAETRMKELTTLAQHTSELYHEYNALDRFELDYRRKLEELDSLNL--PRKGE 283
Q E +R+K+ ++Q+ L + A R+ R++ +N P +
Sbjct: 241 TSIFQVNDELASRIKKAIKVSQNIDHLV-DTVATKRYTKARVRRILTYILVNAKEPTLPK 299
Query: 284 GVTFLHSDLKQQRKLVRSLKKKSLWSR----NLEEVMEKFVEIAAYMHQAILE-AFG 335
G+ L K Q L + K + L +R +E+ +K I HQ I E +FG
Sbjct: 300 GIHILGFTSKGQAHLKKLKKSRPLITRIGAETWDEMTQKADSIYQLGHQDIPEQSFG 356
>sp|Q9GQN0|RBP16_DROME Ran-binding protein 16 OS=Drosophila melanogaster GN=Ranbp16 PE=2
SV=1
Length = 1098
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 97 AMTVDVLDALGSSMSSLNASSGFISGVTSKGNKISILAFEVANTIAKGANL-FQSLSEEN 155
A V +L +L +++L+ S+ +IS T + +S + ++ ++ N +SL++EN
Sbjct: 905 AAFVYILKSLTKGLAALD-SATYISCCTILDSIVSYIFKQLQMKVSTFPNKKLRSLNQEN 963
Query: 156 IQFLKTEVLHSSGVQELVSTDMKELLR 182
+QFLK ++S +Q ++S+ + +L+
Sbjct: 964 VQFLKVVEMNSELLQSMMSSLLNNVLQ 990
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,676,992
Number of Sequences: 539616
Number of extensions: 6026040
Number of successful extensions: 15578
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 15555
Number of HSP's gapped (non-prelim): 101
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)