BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014969
(415 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93788|REMO_SOLTU Remorin OS=Solanum tuberosum PE=1 SV=1
Length = 198
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 57/90 (63%)
Query: 312 SEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEMKLEKERSYSTDKILNKLKLAQMK 371
SE + + +K Q++ + I AWEN ++A EA ++K+E +LEK+++ T+K+ NK+ L +
Sbjct: 99 SEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKE 158
Query: 372 AQEMRISISAKQGQQLPKTAHKAAFFHKHG 401
A+E R I AK+G+ L K AA + G
Sbjct: 159 AEEKRAMIEAKRGEDLLKAEELAAKYRATG 188
>sp|Q9M2D8|Y3126_ARATH Uncharacterized protein At3g61260 OS=Arabidopsis thaliana
GN=At3g61260 PE=1 SV=1
Length = 212
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 312 SEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEMKLEKERSYSTDKILNKLKLAQMK 371
SE + + +K +++ A + AWEN ++A EA ++K+E +LEK+++ +++ NK+ +
Sbjct: 113 SEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKE 172
Query: 372 AQEMRISISAKQGQQLPKTAHKAAFFHKHG--PMSSFRSCF 410
A+E R I AK+G+ + K AA + G P ++ CF
Sbjct: 173 AEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATC-GCF 212
>sp|P34261|YKAA_CAEEL Uncharacterized amino-acid permease B0303.11 OS=Caenorhabditis
elegans GN=B0303.11/B0303.12 PE=3 SV=5
Length = 903
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 89 GLGLTNKNSLHSQFQRRPKSKSGPIVPPPPRMH-NSIYS-----PSTGMQVLD-GGRVKN 141
L L++ + ++Q R S ++P PP ++I++ G+ +L+ G +++N
Sbjct: 180 ALQLSSVMFRYGEYQLRRVSDRNAMIPSPPNEEISTIFAQLFPAAMCGLTILNIGSKLQN 239
Query: 142 FVAGSPFSTGVLVADRISGNFYGQGFLLHNGSYAARSRTSNVPGSG 187
+P G L+A +S FYG +L + AR+ TSN GS
Sbjct: 240 ---TAP--RGALIAIAVSACFYGAAAMLDYVEFFARTSTSNSTGSA 280
>sp|Q90980|CNG3_CHICK Cyclic nucleotide-gated channel rod photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 645
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 108 SKSGPIVPPPPRMHNSIYSPSTG----------MQVLDGGRVKNFVAGSPFSTGVLVADR 157
++G +V ++ +YSP M ++ G++ VA + V+++D
Sbjct: 435 CEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLA-VVADDGVTQFVVLSD- 492
Query: 158 ISGNFYGQGFLLH-NGSYAARSRTSNVPGSGWSDLASDDSSPSSQDEKLDDIPDAEAVV 215
G+++G+ +L+ GS A RT+N+ G+SDL S E L + PDA+A++
Sbjct: 493 --GSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFC--LSKDDLMEALTEYPDAKAML 547
>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2
SV=1
Length = 691
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 108 SKSGPIVPPPPRMHNSIYSPST----------GMQVLDGGRVKNFVAGSPFSTGVLVADR 157
++G +V ++ +YSP M ++ G++ VA + V+++D
Sbjct: 482 CEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLA-VVADDGITQFVVLSD- 539
Query: 158 ISGNFYGQGFLLH-NGSYAARSRTSNVPGSGWSDLASDDSSPSSQDEKLDDIPDAEAVV 215
G+++G+ +L+ GS A RT+N+ G+SDL S E L + PDA+ ++
Sbjct: 540 --GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFC--LSKDDLMEALTEYPDAKTML 594
>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2
SV=2
Length = 684
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 108 SKSGPIVPPPPRMHNSIYSPST----------GMQVLDGGRVKNFVAGSPFSTGVLVADR 157
++G +V ++ +YSP M ++ G++ VA + V+++D
Sbjct: 475 CEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLA-VVADDGITQFVVLSD- 532
Query: 158 ISGNFYGQGFLLH-NGSYAARSRTSNVPGSGWSDLASDDSSPSSQDEKLDDIPDAEAVV 215
G+++G+ +L+ GS A RT+N+ G+SDL S E L + PDA+ ++
Sbjct: 533 --GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFC--LSKDDLMEALTEYPDAKTML 587
>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1
PE=2 SV=1
Length = 683
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 108 SKSGPIVPPPPRMHNSIYSPST----------GMQVLDGGRVKNFVAGSPFSTGVLVADR 157
++G +V ++ +YSP M ++ G++ VA + V+++D
Sbjct: 474 CEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLA-VVADDGITQFVVLSD- 531
Query: 158 ISGNFYGQGFLLH-NGSYAARSRTSNVPGSGWSDLASDDSSPSSQDEKLDDIPDAEAVV 215
G+++G+ +L+ GS A RT+N+ G+SDL S E L + PDA+ ++
Sbjct: 532 --GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFC--LSKDDLMEALTEYPDAKTML 586
>sp|Q00194|CNGA1_BOVIN cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1
Length = 690
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 108 SKSGPIVPPPPRMHNSIYSPSTG----------MQVLDGGRVKNFVAGSPFSTGVLVADR 157
++G +V ++ +YSP M ++ G++ VA + V+++D
Sbjct: 481 CEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLA-VVADDGITQFVVLSD- 538
Query: 158 ISGNFYGQGFLLH-NGSYAARSRTSNVPGSGWSDLASDDSSPSSQDEKLDDIPDAEAVV 215
G+++G+ +L+ GS A RT+N+ G+SDL S E L + PDA+ ++
Sbjct: 539 --GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFC--LSKDDLMEALTEYPDAKGML 593
>sp|O80837|REMO_ARATH Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1
Length = 190
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 245 SPAVRSVAELQNDHPAKLEVREVQI-------DKGSTTISWS-KRHRSRRIKSGFPDVDK 296
SPAV + A + PA +EV + +I K + + H ++ SG D D
Sbjct: 14 SPAVLAPA--KEPTPAPVEVADEKIHNPPPVESKALAVVEKPIEEHTPKKASSGSADRDV 71
Query: 297 FYQNVTGTCAPSL----DLSEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEMKLEK 352
++ S + SE + + ++ Q++ + + AWEN ++A EA +RK+E KLEK
Sbjct: 72 ILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEK 131
Query: 353 ERSYSTDKILNKLKLAQMKAQEMRISISAKQGQQLPKTAHKAAFFHKHGPM-SSFRSCF 410
+++ +K+ NK+ A+E R + AK+G++L K A + G + + CF
Sbjct: 132 KKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190
>sp|P21231|POLG_SBMVN Genome polyprotein OS=Soybean mosaic virus (strain N) PE=1 SV=2
Length = 3066
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 286 RIKSGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREE--AKITAWENLQRAKAEAAI 343
+++ G P ++KF +V G P DL VA S++ Q E+ A+ LQ K A +
Sbjct: 1073 KMEGGHPSIEKFLDHVKGV-RP--DLLPVAVSMTG-QSEDVSAQAKTATQLQLEKIVAFM 1128
Query: 344 RKLEMKLEKERSYSTDKILNKLK 366
L M ++ ERS + K+L+KLK
Sbjct: 1129 ALLTMCIDNERSDAVFKVLSKLK 1151
>sp|Q90069|POLG_SBMVG Genome polyprotein OS=Soybean mosaic virus (strain G2) PE=3 SV=1
Length = 3066
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 286 RIKSGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREE--AKITAWENLQRAKAEAAI 343
+++ G P ++KF +V G P DL VA S++ Q E+ A+ LQ K A +
Sbjct: 1073 KMEGGHPSIEKFLDHVKGV-RP--DLLPVAVSMTG-QSEDVSAQAKTATQLQLEKIVAFM 1128
Query: 344 RKLEMKLEKERSYSTDKILNKLK 366
L M ++ ERS + K+L+KLK
Sbjct: 1129 ALLTMCIDNERSDAVFKVLSKLK 1151
>sp|O28062|Y2221_ARCFU Uncharacterized protein AF_2221 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2221 PE=4 SV=1
Length = 340
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Query: 215 VSRVVSRRDMATQMSPESSTNSSPRGKSSFSPAVRSVAELQNDHPAKLEVREVQID--KG 272
V +V+ R + E T R SS+ P V + + + ND + E+ +D G
Sbjct: 98 VEKVIYYRKDRRKRQQEKKTIEFLRHLSSYFPYVAAWSAIFNDEAISFDNIEIHLDSFDG 157
Query: 273 STTISWS--KRHRSRRIKSGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREEAKITA 330
T +W K + S +IK+ FP D+ C P + S++ S+ ++
Sbjct: 158 EVTYAWEILKNNISAKIKT-FPKGDQ--------CNPFISASDIVLSLVEI--------- 199
Query: 331 WENLQRAKAEAAIRKLEMKLEK 352
NL + +++L+ LEK
Sbjct: 200 --NLLKGDFRLDVQELKKLLEK 219
>sp|Q9UK53|ING1_HUMAN Inhibitor of growth protein 1 OS=Homo sapiens GN=ING1 PE=1 SV=2
Length = 422
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 38 KGWSSERVPHPTSSSRRHISAASLTPFYSGRALPSK 73
+G SS+R+P P +RR AASL GRA P K
Sbjct: 153 RGCSSDRLPRPAGPARRQFQAASLLTRGWGRAWPWK 188
>sp|Q9UUD0|YNQA_SCHPO Uncharacterized protein C19C2.10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC19C2.10 PE=1 SV=1
Length = 501
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%)
Query: 309 LDLSEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEMKLEKERSYSTDKILNKLKLA 368
L ++ I K ++EE+K+ RAK E ++ + E ++ + + D++ N ++L
Sbjct: 148 LVFDALSTKIQKAKKEESKLEEDLRNARAKYEESLEEFEDRMVQLKELEPDRVENVVRLL 207
Query: 369 QMKAQEMRISISAKQGQQL 387
QM+ + + S+ +G ++
Sbjct: 208 QMQIRFHQKSLDLLKGLEM 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,772,397
Number of Sequences: 539616
Number of extensions: 6852988
Number of successful extensions: 63065
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 59330
Number of HSP's gapped (non-prelim): 3546
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)