Query 014970
Match_columns 415
No_of_seqs 150 out of 1323
Neff 8.3
Searched_HMMs 13730
Date Mon Mar 25 04:22:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014970.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014970hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pr9a1 b.2.7.1 (A:159-435) Se 100.0 3.5E-61 2.5E-65 457.6 32.0 245 167-414 1-276 (277)
2 d2vglm2 d.110.4.2 (M:1-141) Mu 100.0 1E-33 7.5E-38 240.7 18.3 141 1-143 1-141 (141)
3 d2vgls_ d.110.4.2 (S:) Sigma2 100.0 1E-27 7.4E-32 203.3 17.0 135 1-137 1-138 (142)
4 d3cpta1 d.110.7.1 (A:3-118) ME 93.9 0.29 2.1E-05 37.2 10.3 90 2-93 17-114 (116)
5 d2fh5a1 d.110.4.4 (A:1-129) Si 89.0 1.7 0.00012 33.5 10.0 93 1-96 1-95 (129)
6 d1nrja_ d.110.4.4 (A:) Srx dom 76.3 6.5 0.00047 30.1 8.2 74 1-74 1-94 (155)
7 d1ifqa_ d.110.4.1 (A:) Sec22b 66.4 23 0.0017 26.5 12.9 48 50-97 54-101 (127)
8 d1ioua_ d.110.4.1 (A:) Synapto 58.1 23 0.0016 26.9 8.4 90 3-93 4-103 (140)
9 d2j3wa1 d.110.4.3 (A:1-140) Se 24.0 1.3E+02 0.0096 22.2 10.1 19 4-22 6-24 (140)
10 d1ni5a4 d.229.1.1 (A:227-314) 16.0 64 0.0047 21.8 3.6 40 27-69 46-85 (88)
No 1
>d2pr9a1 b.2.7.1 (A:159-435) Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00 E-value=3.5e-61 Score=457.59 Aligned_cols=245 Identities=26% Similarity=0.492 Sum_probs=219.4
Q ss_pred CccCCCCCCcccceEEEEEEEEEEEEEccCCcEEEEEEEEEEEEEEeecCCCeeEEEecCCc------------------
Q 014970 167 VPWRPTDVKYANNEVYVDLVEEMDAIINRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANPS------------------ 228 (415)
Q Consensus 167 ~~wR~~~~~~~~nei~vdv~E~i~~~~~~~G~~~~~~v~G~i~~~~~LsG~P~~~l~ln~~~------------------ 228 (415)
+|||+.|++|++|||||||+|+++|+++++|.++.++|.|+|.|+|+|+|+|+|+|+||++.
T Consensus 1 i~WR~~~i~y~~NEi~vDV~E~i~~~~~~~G~~~~~~V~G~I~~~s~LsG~P~~~l~Ln~~~~~~~~~~~~~~~~~~~~~ 80 (277)
T d2pr9a1 1 IGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGK 80 (277)
T ss_dssp CTTSCSCCCCSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEECSSSCEEEEEESBC------------------C
T ss_pred CCccCCCCcccCCEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEecCCCCeEEEEecchhhccccccccccccccccc
Confidence 59999999999999999999999999999999999999999999999999999999998753
Q ss_pred ---ccccceecceeecCCCCCCceEEEeCCCCcEEEEEEEecCCCCCCEEEEEEEEEcCCceEEEEEEEeecCCC--Cce
Q 014970 229 ---ILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPG--KTI 303 (415)
Q Consensus 229 ---~l~~~~fH~cV~~~~~~~~~~l~f~PPdg~f~L~~Y~~~~~~~~P~~v~~~~~~~~~~~~~ei~~~~~~~~~--~~~ 303 (415)
.++||+||||||++.|+++++|+|+||||+|+||+||++.+..+||.+.+++.... +.++++.++++++.+ ..+
T Consensus 81 ~~~~l~d~~fH~cV~~~~f~~~~~i~F~PPdG~F~Lm~Y~~~~~~~~P~~i~~~~~~~~-~~~~~~~i~l~~~~~~~~~~ 159 (277)
T d2pr9a1 81 QSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVG-RTKLEVKVVIKSNFKPSLLA 159 (277)
T ss_dssp CCBCCSEEEECTTSBCC-----CCEEECCCSEEEEEEEEEECSSCCCCEEEEEEEEEET-TTEEEEEEEEEECSCTTCEE
T ss_pred CceEccceeeeeccccccccccceEeecCCCCcEEEEEEEcCCCcCCCcEEEEEEEecc-CcEEEEEEEEEeccCCCeee
Confidence 48999999999999999999999999999999999999988999999999998654 457888888887653 489
Q ss_pred eeEEEEEeCCCCceeeEEEeccccceeeeC--cEEEEEcCCCCCCCCeeEEEEEEeecCCcCC-CCCCcEEEEEEECccc
Q 014970 304 DSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTWSIGRIPKDKAPSLSGTMVLETGLETL-RVFPTFQVEFRIMGVA 380 (415)
Q Consensus 304 ~~v~v~ip~p~~~~~~~~~~~~G~~~~~~~--~~l~W~I~~~~~~~~~~l~g~~~~~~~~~~~-~~~~pi~v~F~~~~~~ 380 (415)
++|.|+||+|..+..++++++.|++ +|+. ++++|+|++++++.+++|+|++++....... +.++|++|+|++| ++
T Consensus 160 ~~v~I~iP~P~~~~~~~~~~~~G~~-~y~~~~~~l~W~I~k~~~~~~~~l~~~~~~~~~~~~~~~~~~pi~v~F~ip-~t 237 (277)
T d2pr9a1 160 QKIEVRIPTPLNTSGVQVICMKGKA-KYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FA 237 (277)
T ss_dssp EEEEEEEECCTTEEEEEEEESSSEE-EEEGGGTEEEEEEEEEETTCEEEEEEEEEECCCCSSSCCCCCCEEEEEEES-SC
T ss_pred eEEEEEeeCCCcccCceEEecCceE-EEeccCCEEEEecccccCCccceEEEEEEeccCCCCccccCCcEEEEEEec-cc
Confidence 9999999999999999999999999 9998 9999999999999999999999997654333 5588999999999 89
Q ss_pred ccccEEeEEEeec-----CCCccccceEEEEecCcEEEc
Q 014970 381 LSGLQIDKLDLQN-----VPNRLYKGFRAVTRAGEYEVR 414 (415)
Q Consensus 381 ~SGl~V~~l~v~~-----~~~~~~k~vkY~t~sg~y~ir 414 (415)
+||++|++++|.+ ++|+|+|||||+|+||+|+||
T Consensus 238 ~Sgl~V~~l~v~~~~~~~~~~~~~k~vrY~t~sg~Y~~R 276 (277)
T d2pr9a1 238 PSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETR 276 (277)
T ss_dssp TTCCCEEEEEEECSSSSCCGGGSEEEEEEEEEEEEEEEC
T ss_pred ccceEEEEEEEeccccCCCCCCCCCCEEEEEECCCEEEC
Confidence 9999999999943 468999999999999999999
No 2
>d2vglm2 d.110.4.2 (M:1-141) Mu2 adaptin (clathrin coat assembly protein AP50) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00 E-value=1e-33 Score=240.69 Aligned_cols=141 Identities=30% Similarity=0.570 Sum_probs=133.6
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChhhH
Q 014970 1 MLQCIFLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPLMG 80 (415)
Q Consensus 1 MI~~i~I~~~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~v~~~~~~~n~l~~ 80 (415)
||+|+||+|++|++|++|+|++ +.+++.++.|++++..... +..+|++..++.+++|++++++||+++++.++|++++
T Consensus 1 MI~~i~Iln~~G~~l~~r~y~~-~~~~~~~~~f~~~~~~~~~-~~~~pi~~~~~~~~~~~~~~~l~~v~v~~~~~n~l~~ 78 (141)
T d2vglm2 1 MIGGLFIYNHKGEVLISRVYRD-DIGRNAVDAFRVNVIHARQ-QVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMV 78 (141)
T ss_dssp CCCEEEEECTTCCEEEEEECSS-SCCHHHHHHHHHHTTTCSS-CCCCSEEEETTEEEEEEEETTEEEEEEESSCCCHHHH
T ss_pred CceEEEEEcCCCCEEEEEecCC-CCChHHHHHHHHHHHhccc-cCCCCeEEECCEEEEEEEECCEEEEEEecCCCCHHHH
Confidence 9999999999999999999999 8999999999999987543 4668999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHhhHHHHHHHHHHHhcCCcccccChhhHhhccCCCcchhc
Q 014970 81 IEFLCRVADILSDYLGELNEDLIKDNFVIVYELLDEMIDNGFPLTTEPNILREMIAPPNIVSK 143 (415)
Q Consensus 81 ~~~L~~i~~~l~~~~~~l~e~~i~~N~~~i~~lldEiid~G~p~~t~~~~l~~~i~~~s~~~k 143 (415)
+++|+++.++|++|||+++|++|++||+++|++||||+|+|+|++|+++.|+++|.++++.+|
T Consensus 79 ~e~L~~~~~~l~~y~~~~~e~~i~~n~~~v~~lLDE~id~G~p~~t~~~~l~~~i~~~~~~~k 141 (141)
T d2vglm2 79 FEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQ 141 (141)
T ss_dssp HHHHHHHHHHHHHHHSSCCHHHHHHTHHHHHHHHHHHEETTEECCCCHHHHGGGCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHhCCEEEEccHHHHHHHhccCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999987654
No 3
>d2vgls_ d.110.4.2 (S:) Sigma2 adaptin (clathrin coat assembly protein AP17) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=1e-27 Score=203.25 Aligned_cols=135 Identities=21% Similarity=0.259 Sum_probs=115.8
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCC--cchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChh
Q 014970 1 MLQCIFLLADNGAVILEKQLTGHRVD--RSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPL 78 (415)
Q Consensus 1 MI~~i~I~~~~G~~l~~r~y~~~~~~--~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~v~~~~~~~n~l 78 (415)
||+++||+|++|+++++|||++.... +.....|.+.+.... ...+|+++++++.++|++++++||+++++.++|++
T Consensus 1 MI~~i~i~n~~G~~~l~K~Y~~~~~~~~~~~~~~~~~~i~~~~--~~~~~i~~~~~~~~vy~~~~~l~~v~~~~~~~n~l 78 (142)
T d2vgls_ 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRD--AKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNL 78 (142)
T ss_dssp CEEEEEEEETTSCEEEEEECSCCCHHHHHHHHHHHHHHHHTCC--TTSCSEEEETTEEEEEEEETTEEEEEEECTTSCHH
T ss_pred CeEEEEEEcCCCCEEEEEeCCCCCHHHHHHHHHHHHHHhhcCC--CCCCceEEECCEEEEEEEECCEEEEEEECCCccHH
Confidence 99999999999999999999861111 222334666665532 35678999999888889999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhcCCCCHHHHHhhHHHHHHHHHHHhcCCcccccChhhH-hhccCC
Q 014970 79 MGIEFLCRVADILSDYLGELNEDLIKDNFVIVYELLDEMIDNGFPLTTEPNIL-REMIAP 137 (415)
Q Consensus 79 ~~~~~L~~i~~~l~~~~~~l~e~~i~~N~~~i~~lldEiid~G~p~~t~~~~l-~~~i~~ 137 (415)
+++++|+++.+++++|||+++|.+|++||+++|++||||+|+|+|++|+++.+ +.+..+
T Consensus 79 ~~~e~L~~~~~~l~~~~~~~~e~~i~~n~~~v~~~lDE~id~G~~~et~~~~Il~~~~~~ 138 (142)
T d2vgls_ 79 AYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLML 138 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCHHHHHHTHHHHHHHHHHHEETTEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccCHHHHHhHHHHHHHHHHHHHhCCeeEeCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999865 554433
No 4
>d3cpta1 d.110.7.1 (A:3-118) MEK binding partner 1, MP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.86 E-value=0.29 Score=37.16 Aligned_cols=90 Identities=10% Similarity=0.044 Sum_probs=63.0
Q ss_pred eEEEEEEcCCCCEEEEEccCCCCCCc-----chHHHHHHHHhccC--CCCCCCC-EEEcCCEEEEEEEeCCEEEEEEecC
Q 014970 2 LQCIFLLADNGAVILEKQLTGHRVDR-----SICDWFWDHVISQG--DSFKSMP-VIASPTHYIFQIVRAGITFLACTQV 73 (415)
Q Consensus 2 I~~i~I~~~~G~~l~~r~y~~~~~~~-----~~~~~f~~~~~~~~--~~~~~~~-i~~~~~~~~~~~~~~~l~~v~~~~~ 73 (415)
+.+|+|.|++|=+++.=.-.+ .+. +.+..|-....+.+ ..++... +..++.+.+++.....+++..++..
T Consensus 17 l~~I~iTDrDGVpv~~v~~~~--~p~~~~~~~~lstf~~a~dq~sKLglg~~ksii~~Y~~~qvv~~~~~pl~vt~ia~~ 94 (116)
T d3cpta1 17 LHAIVVSDRDGVPVIKVANDN--APEHALRPGFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASS 94 (116)
T ss_dssp EEEEEEECTTSCEEEEEECTT--SCGGGGSHHHHHHHHHHHHHHHHHTCCCEEEEEEECSSEEEEEEEETTEEEEEEEET
T ss_pred eEEEEEEcCCCcEEEEecCCC--ChhhhcchHHHHHHHHHHHhhcccCCCCCcEEEEEecCeEEEEEecCceEEEEEecC
Confidence 579999999999998765443 332 22233332222111 2233334 4455788888889999999999999
Q ss_pred CCChhhHHHHHHHHHHHHhh
Q 014970 74 EMPPLMGIEFLCRVADILSD 93 (415)
Q Consensus 74 ~~n~l~~~~~L~~i~~~l~~ 93 (415)
+.|.=.++.+-+.+..+|++
T Consensus 95 ~aNtG~Il~l~~~l~~~L~~ 114 (116)
T d3cpta1 95 SANTGLIVSLEKELAPLFEE 114 (116)
T ss_dssp TSCHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHhh
Confidence 99999999999999888875
No 5
>d2fh5a1 d.110.4.4 (A:1-129) Signal recognition particle receptor alpha subunit, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.97 E-value=1.7 Score=33.46 Aligned_cols=93 Identities=11% Similarity=0.023 Sum_probs=58.5
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCC--EEEEEEecCCCChh
Q 014970 1 MLQCIFLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAG--ITFLACTQVEMPPL 78 (415)
Q Consensus 1 MI~~i~I~~~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--l~~v~~~~~~~n~l 78 (415)
||+.+.|++..|=+|-+....+ +...+.+..+.+.+.-... . ..+-+..+++.+-+...|+ |.||++-.+--+..
T Consensus 1 MiD~f~IftkGGiVLW~~~~~~-~~~~~~IN~LI~~vlLEER-~-~~~~~~~d~y~lkw~~~Ne~~lvfV~vYQ~il~l~ 77 (129)
T d2fh5a1 1 MVDFFTIFSKGGLVLWCFQGVS-DSCTGPVNALIRSVLLQER-G-GNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLT 77 (129)
T ss_dssp SCSEEEEEETTSBEEEEEBTTT-BSCCCHHHHHHHHTGGGC---------CCCCCEEEEEEETTTTEEEEEEESCGGGHH
T ss_pred CccEEEEEeCCeEEEEeecCCC-cccchhHHHHHHHhheecc-c-CCCceeECCEEEEEEEeccCCEEEEEEEhhhhchH
Confidence 9999999999999998754333 4455667776666664322 1 1233556777776666665 78888876655555
Q ss_pred hHHHHHHHHHHHHhhhcC
Q 014970 79 MGIEFLCRVADILSDYLG 96 (415)
Q Consensus 79 ~~~~~L~~i~~~l~~~~~ 96 (415)
.+=.||..+...+.+-++
T Consensus 78 yvd~lL~~i~~~F~~~y~ 95 (129)
T d2fh5a1 78 YVDKLIDDVHRLFRDKYR 95 (129)
T ss_dssp HHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 555666666665555554
No 6
>d1nrja_ d.110.4.4 (A:) Srx domain of the signal recognition particle receptor alpha-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=76.26 E-value=6.5 Score=30.09 Aligned_cols=74 Identities=12% Similarity=0.243 Sum_probs=46.8
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCC-----------CCCEEEcC--------CEEEEEE-
Q 014970 1 MLQCIFLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFK-----------SMPVIASP--------THYIFQI- 60 (415)
Q Consensus 1 MI~~i~I~~~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~-----------~~~i~~~~--------~~~~~~~- 60 (415)
||+.+.|+...|++|++..--+.......+.+|..++++.+...+ .-+.+.++ -.+.||.
T Consensus 1 M~dQf~vFTp~GqvLY~yN~l~kKfsE~qiN~fIShLissP~~~~es~~~~~~~~~~~~l~si~s~~k~s~~F~~~~h~s 80 (155)
T d1nrja_ 1 MFDQLAVFTPQGQVLYQYNCLGKKFSEIQINSFISQLITSPVTRKESVANANTDGFDFNLLTINSEHKNSPSFNALFYLN 80 (155)
T ss_dssp CCCEEEEECTTCBEEEEEETTSCCCCHHHHHHHHHHHHHSCCCGGGEECSGGGTTCCEEEEECC--------CEEEEEEE
T ss_pred CcceEEEeccCceEEEEecccchHHHHHHHHHHHHHHhcCCccccccccccccccccceeeeeccccccCcchHHhheec
Confidence 999999999999999977543324555567788888887542111 11333332 2334444
Q ss_pred EeCCEEEEEEecCC
Q 014970 61 VRAGITFLACTQVE 74 (415)
Q Consensus 61 ~~~~l~~v~~~~~~ 74 (415)
+...||||+.-...
T Consensus 81 KqPeLy~VvTyAeq 94 (155)
T d1nrja_ 81 KQPELYFVVTFAEQ 94 (155)
T ss_dssp ETTEEEEEEEESSC
T ss_pred CCCcEEEEEEeccc
Confidence 44779988886633
No 7
>d1ifqa_ d.110.4.1 (A:) Sec22b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.36 E-value=23 Score=26.46 Aligned_cols=48 Identities=13% Similarity=0.343 Sum_probs=41.2
Q ss_pred EEcCCEEEEEEEeCCEEEEEEecCCCChhhHHHHHHHHHHHHhhhcCC
Q 014970 50 IASPTHYIFQIVRAGITFLACTQVEMPPLMGIEFLCRVADILSDYLGE 97 (415)
Q Consensus 50 ~~~~~~~~~~~~~~~l~~v~~~~~~~n~l~~~~~L~~i~~~l~~~~~~ 97 (415)
+..+.+.+.|...+++.++|+++.+-+.-+.+.||..+.+-+..-++.
T Consensus 54 ~~~~~y~fHy~~~~gi~yl~i~d~~~~~~laF~fLeei~~eF~~~y~~ 101 (127)
T d1ifqa_ 54 LEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGK 101 (127)
T ss_dssp EEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEECCEEEEEEecCCeEEEEEEccccCchhHHHHHHHHHHHHHHhhhh
Confidence 456888888899999999999999999999999999988877665553
No 8
>d1ioua_ d.110.4.1 (A:) Synaptobrevin homolog 1 ykt6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.13 E-value=23 Score=26.91 Aligned_cols=90 Identities=17% Similarity=0.063 Sum_probs=53.3
Q ss_pred EEEEEEcCC--CCEEEEEccCCCCC---CcchHHHH----HHHHhccCCCCCCCCEEEcCCEEEE-EEEeCCEEEEEEec
Q 014970 3 QCIFLLADN--GAVILEKQLTGHRV---DRSICDWF----WDHVISQGDSFKSMPVIASPTHYIF-QIVRAGITFLACTQ 72 (415)
Q Consensus 3 ~~i~I~~~~--G~~l~~r~y~~~~~---~~~~~~~f----~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~v~~~~ 72 (415)
-++.|+... .-+++...+.=... .|+...+| -+.+..+.+.+... -++.+.+.++ |+..+++.++++++
T Consensus 4 ~~~~v~~~~~~~~~~L~~a~Dlssf~ffqR~svkE~~~f~sr~i~~Rt~~g~r~-sv~~~~y~~h~yv~~~gl~~l~i~d 82 (140)
T d1ioua_ 4 YYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGERQ-SIEEGNYIGHVYARSEGICGVLITD 82 (140)
T ss_dssp CEEEEEEEETTEEEEEEEEECCSSCCTTHHHHHHHHHHHHHHHHHHHCCSSSEE-EEEETTEEEEEECCSSSCEEEEEBC
T ss_pred EEEEEEEcCCCCcEEEeeeccccccceeehHhHHHHHHHHHHHHhhcCCCCceE-EEEcCCeEEEEEEeeCCEEEEEEEC
Confidence 456666633 33445555541122 25555543 33444443333222 3445665554 56778999999999
Q ss_pred CCCChhhHHHHHHHHHHHHhh
Q 014970 73 VEMPPLMGIEFLCRVADILSD 93 (415)
Q Consensus 73 ~~~n~l~~~~~L~~i~~~l~~ 93 (415)
.+=+.-.++.+|+.+.+-...
T Consensus 83 ~~Yp~r~AF~~L~~i~~eF~~ 103 (140)
T d1ioua_ 83 KQYPVRPAYTLLNKILDEYLV 103 (140)
T ss_dssp TTSCHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHH
Confidence 999999999999976665433
No 9
>d2j3wa1 d.110.4.3 (A:1-140) Sedlin (SEDL) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.96 E-value=1.3e+02 Score=22.23 Aligned_cols=19 Identities=5% Similarity=0.237 Sum_probs=16.9
Q ss_pred EEEEEcCCCCEEEEEccCC
Q 014970 4 CIFLLADNGAVILEKQLTG 22 (415)
Q Consensus 4 ~i~I~~~~G~~l~~r~y~~ 22 (415)
.+.|++++|.+|+.+-|..
T Consensus 6 ~f~IIg~~~~pLY~~ef~~ 24 (140)
T d2j3wa1 6 YFVIVGHHDNPVFEMEFLP 24 (140)
T ss_dssp EEEEECTTSCEEEEEEECC
T ss_pred EEEEEcCCCCeeEEEecCC
Confidence 5679999999999999975
No 10
>d1ni5a4 d.229.1.1 (A:227-314) tRNA-Ile-lysidine synthetase, TilS, substrate-binding domain {Escherichia coli [TaxId: 562]}
Probab=15.96 E-value=64 Score=21.83 Aligned_cols=40 Identities=13% Similarity=0.157 Sum_probs=28.1
Q ss_pred cchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEE
Q 014970 27 RSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLA 69 (415)
Q Consensus 27 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~v~ 69 (415)
...++++.+++.... .+..|.+..++..+. +..+.||++-
T Consensus 46 ~~~L~ei~~ql~~a~--~Da~p~i~~~~~~ir-ry~~~Ly~~~ 85 (88)
T d1ni5a4 46 RDALVRIWQEVALAR--EDASPCLRLGAFEIR-RYQSQLWWIK 85 (88)
T ss_dssp HHHHHHHHHHTTTSC--GGGCCEEEETTEEEE-ESSSEEEEEE
T ss_pred HHHHHHHHHHHHhCC--CCCCcEEEECCEEEE-EECCEEEEEe
Confidence 456778888877643 345688888886665 6677788874
Done!