Query 014973
Match_columns 415
No_of_seqs 199 out of 413
Neff 3.3
Searched_HMMs 46136
Date Fri Mar 29 01:52:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014973.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014973hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03162 golden-2 like transcr 99.9 3.6E-25 7.8E-30 221.8 8.9 70 260-330 230-299 (526)
2 TIGR01557 myb_SHAQKYF myb-like 99.8 2.7E-21 5.8E-26 148.8 6.4 56 265-320 1-56 (57)
3 PF14379 Myb_CC_LHEQLE: MYB-CC 99.8 2.4E-19 5.1E-24 136.4 4.5 44 353-396 1-44 (51)
4 PF00249 Myb_DNA-binding: Myb- 97.0 0.0015 3.4E-08 47.5 5.3 48 267-318 1-48 (48)
5 smart00426 TEA TEA domain. 78.7 2.1 4.6E-05 35.2 2.9 17 269-285 5-21 (68)
6 PF14379 Myb_CC_LHEQLE: MYB-CC 74.1 5.8 0.00013 31.0 4.1 33 358-390 16-49 (51)
7 PF15235 GRIN_C: G protein-reg 65.7 3.6 7.9E-05 37.8 1.6 18 374-391 70-87 (137)
8 KOG3101 Esterase D [General fu 58.8 7.9 0.00017 38.8 2.7 54 172-227 34-94 (283)
9 smart00717 SANT SANT SWI3, AD 55.9 47 0.001 22.3 5.5 43 268-316 2-45 (49)
10 PF12776 Myb_DNA-bind_3: Myb/S 53.4 18 0.00039 28.9 3.5 51 269-319 1-63 (96)
11 cd00167 SANT 'SWI3, ADA2, N-Co 51.9 56 0.0012 21.7 5.3 43 269-316 1-43 (45)
12 PF01285 TEA: TEA/ATTS domain 51.3 19 0.0004 38.3 4.1 54 263-317 45-112 (431)
13 smart00501 BRIGHT BRIGHT, ARID 42.9 27 0.00058 28.6 3.0 46 272-318 32-84 (93)
14 TIGR02894 DNA_bind_RsfA transc 32.2 62 0.0013 30.7 4.0 53 260-319 41-94 (161)
15 PF07384 DUF1497: Protein of u 28.6 49 0.0011 26.4 2.2 21 269-289 37-57 (59)
16 PF11888 DUF3408: Protein of u 20.8 1.9E+02 0.004 25.8 4.7 47 263-320 79-125 (136)
No 1
>PLN03162 golden-2 like transcription factor; Provisional
Probab=99.91 E-value=3.6e-25 Score=221.81 Aligned_cols=70 Identities=43% Similarity=0.655 Sum_probs=63.5
Q ss_pred CCCCCCCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCccHHHHHHHHhhhhhhccCCcchhhh
Q 014973 260 SATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLAKYMPEKKEEK 330 (415)
Q Consensus 260 ~~~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYRl~k~~p~~~~~k 330 (415)
....+|+||+||+|||+|||+||++|| .++||||+||++|+|+|||++||||||||||+.+++...++..
T Consensus 230 ~~g~KKpRLrWTpELH~rFVeAV~qLG-~dKATPK~ILelMnV~GLTRenVKSHLQKYRl~rk~l~~rEaE 299 (526)
T PLN03162 230 APGKKKAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRHLAAREAE 299 (526)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHhC-cCccchHHHHHHcCCCCcCHHHHHHHHHHHHHhcccccchhhh
Confidence 445789999999999999999999996 7999999999999999999999999999999998876655543
No 2
>TIGR01557 myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
Probab=99.84 E-value=2.7e-21 Score=148.75 Aligned_cols=56 Identities=61% Similarity=0.976 Sum_probs=54.3
Q ss_pred CCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCccHHHHHHHHhhhhhh
Q 014973 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLA 320 (415)
Q Consensus 265 KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYRl~ 320 (415)
|+|++||+|+|++|++||+.||+.+.||||.|+++|++++||+.+|+|||||||+.
T Consensus 1 k~r~~WT~eeh~~Fl~ai~~~G~g~~a~pk~I~~~~~~~~lT~~qV~SH~QKy~~k 56 (57)
T TIGR01557 1 KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLK 56 (57)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcccchHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence 78999999999999999999998899999999999999999999999999999985
No 3
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=99.77 E-value=2.4e-19 Score=136.38 Aligned_cols=44 Identities=45% Similarity=0.591 Sum_probs=41.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHhhhhhhhccc
Q 014973 353 SIQFTEALRMQMEVQKQLHEQLESKRDELIIVYAKAQASKNSIV 396 (415)
Q Consensus 353 ~~qitEALrmQmEVQkrLHEQLEVQR~LQlRIEAq~~~~k~~~~ 396 (415)
+++|+||||+||||||||||||||||+||+||||||++++.++.
T Consensus 1 g~~i~EALr~QmEvQrrLhEQLEvQr~Lqlrieaqgkyl~~ile 44 (51)
T PF14379_consen 1 GMQITEALRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILE 44 (51)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 57899999999999999999999999999999999999988764
No 4
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=97.03 E-value=0.0015 Score=47.51 Aligned_cols=48 Identities=33% Similarity=0.371 Sum_probs=41.3
Q ss_pred CcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCccHHHHHHHHhhhh
Q 014973 267 RMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR 318 (415)
Q Consensus 267 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYR 318 (415)
|..||+|=+++|++||.++|. + .-+.|-+.|+ .|-|..++++|.++|+
T Consensus 1 r~~Wt~eE~~~l~~~v~~~g~-~--~W~~Ia~~~~-~~Rt~~qc~~~~~~~~ 48 (48)
T PF00249_consen 1 RGPWTEEEDEKLLEAVKKYGK-D--NWKKIAKRMP-GGRTAKQCRSRYQNLL 48 (48)
T ss_dssp S-SS-HHHHHHHHHHHHHSTT-T--HHHHHHHHHS-SSSTHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCC-c--HHHHHHHHcC-CCCCHHHHHHHHHhhC
Confidence 568999999999999999963 2 5889999998 8999999999999985
No 5
>smart00426 TEA TEA domain.
Probab=78.67 E-value=2.1 Score=35.16 Aligned_cols=17 Identities=29% Similarity=0.790 Sum_probs=15.9
Q ss_pred ccCHHHHHHHHHHHHhh
Q 014973 269 RWTPELHECFVEAVNKL 285 (415)
Q Consensus 269 rWT~ELH~rFV~AV~qL 285 (415)
.|.++|-..|++|+...
T Consensus 5 vWp~~lE~Af~~aL~~~ 21 (68)
T smart00426 5 VWSPDIEQAFQEALAIY 21 (68)
T ss_pred cCcHHHHHHHHHHHHHc
Confidence 69999999999999877
No 6
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=74.05 E-value=5.8 Score=31.04 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHhhh-hhhhHHHHHhhhh
Q 014973 358 EALRMQMEVQKQLHEQLESK-RDELIIVYAKAQA 390 (415)
Q Consensus 358 EALrmQmEVQkrLHEQLEVQ-R~LQlRIEAq~~~ 390 (415)
.-|.-|+||||.|.-++|-| |-|+-=+|.+.+.
T Consensus 16 rrLhEQLEvQr~Lqlrieaqgkyl~~ilek~~~~ 49 (51)
T PF14379_consen 16 RRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQKA 49 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 34666778888887777777 6666666655544
No 7
>PF15235 GRIN_C: G protein-regulated inducer of neurite outgrowth C-terminus
Probab=65.67 E-value=3.6 Score=37.79 Aligned_cols=18 Identities=0% Similarity=-0.038 Sum_probs=14.4
Q ss_pred HhhhhhhhHHHHHhhhhh
Q 014973 374 LESKRDELIIVYAKAQAS 391 (415)
Q Consensus 374 LEVQR~LQlRIEAq~~~~ 391 (415)
+.||+||+++||.|++..
T Consensus 70 ~AIQkHLE~qi~e~~~q~ 87 (137)
T PF15235_consen 70 MAIQKHLERQIEEHERQR 87 (137)
T ss_pred HHHHHHHHHHHHHhhhcc
Confidence 468999999999986544
No 8
>KOG3101 consensus Esterase D [General function prediction only]
Probab=58.84 E-value=7.9 Score=38.82 Aligned_cols=54 Identities=24% Similarity=0.412 Sum_probs=44.9
Q ss_pred CCCCCCCCC-------CCCcccccccccccccchhhhhhhccccccccCCCCCCchhhccCCC
Q 014973 172 FPEDASDGS-------FPGVTCMGERLGLNEHLELQFLSDELDIDITDHGENPRLDEIYDAPK 227 (415)
Q Consensus 172 ~~~~~s~gs-------~~~~~~~~~~~~~~eq~e~q~lsdql~i~ItD~~~~P~~d~i~~~p~ 227 (415)
||.+++.+- +-|++|+-++ |.++.-||+-++..+|+|+--+..||-.||-+.+.
T Consensus 34 lPp~a~~~k~~P~lf~LSGLTCT~~N--fi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~e 94 (283)
T KOG3101|consen 34 LPPDAPRGKRCPVLFYLSGLTCTHEN--FIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDE 94 (283)
T ss_pred cCCCcccCCcCceEEEecCCcccchh--hHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcc
Confidence 456665552 3589998876 99999999999999999999999999999987753
No 9
>smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=55.91 E-value=47 Score=22.30 Aligned_cols=43 Identities=23% Similarity=0.321 Sum_probs=32.3
Q ss_pred cccCHHHHHHHHHHHHhhC-CCCCCchHHHHhhcCCCCccHHHHHHHHhh
Q 014973 268 MRWTPELHECFVEAVNKLD-GPEKATPKAVLKLMNVEGLTIYHVKSHLQK 316 (415)
Q Consensus 268 lrWT~ELH~rFV~AV~qLG-G~dkAtPK~IL~lM~V~GLT~~hVKSHLQK 316 (415)
-.||++=...|+.++.++| + .=+.|-+.|+ +=|...|+.+-.+
T Consensus 2 ~~Wt~~E~~~l~~~~~~~g~~----~w~~Ia~~~~--~rt~~~~~~~~~~ 45 (49)
T smart00717 2 GEWTEEEDELLIELVKKYGKN----NWEKIAKELP--GRTAEQCRERWNN 45 (49)
T ss_pred CCCCHHHHHHHHHHHHHHCcC----CHHHHHHHcC--CCCHHHHHHHHHH
Confidence 4699999999999999996 3 3456666664 6777777766443
No 10
>PF12776 Myb_DNA-bind_3: Myb/SANT-like DNA-binding domain; InterPro: IPR024752 This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains.
Probab=53.42 E-value=18 Score=28.95 Aligned_cols=51 Identities=16% Similarity=0.269 Sum_probs=33.7
Q ss_pred ccCHHHHHHHHHHHHh---hCCC-CCCchH-----HHHhhcCC---CCccHHHHHHHHhhhhh
Q 014973 269 RWTPELHECFVEAVNK---LDGP-EKATPK-----AVLKLMNV---EGLTIYHVKSHLQKYRL 319 (415)
Q Consensus 269 rWT~ELH~rFV~AV~q---LGG~-dkAtPK-----~IL~lM~V---~GLT~~hVKSHLQKYRl 319 (415)
+||++..+-||+++-+ .|+- .....| .|.+.|+- -.+|..+|++|+...|.
T Consensus 1 ~Wt~~~~~~ll~~~~e~~~~g~~~~~~~fk~~~w~~i~~~~~~~~~~~~t~~qlknk~~~lk~ 63 (96)
T PF12776_consen 1 SWTPEMTRFLLDLLIEQINKGNRPTNGGFKKEGWNNIAEEFNEKTGLNYTKKQLKNKWKTLKK 63 (96)
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCCCCcCHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Confidence 6999999999999843 3433 123332 34555552 45788999999876544
No 11
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=51.89 E-value=56 Score=21.69 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=32.1
Q ss_pred ccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCccHHHHHHHHhh
Q 014973 269 RWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQK 316 (415)
Q Consensus 269 rWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQK 316 (415)
.||.+=+..|+.++.++|- ..=+.|-+.|+ +=|..+|+.|..+
T Consensus 1 ~Wt~eE~~~l~~~~~~~g~---~~w~~Ia~~~~--~rs~~~~~~~~~~ 43 (45)
T cd00167 1 PWTEEEDELLLEAVKKYGK---NNWEKIAKELP--GRTPKQCRERWRN 43 (45)
T ss_pred CCCHHHHHHHHHHHHHHCc---CCHHHHHhHcC--CCCHHHHHHHHHH
Confidence 4999999999999999972 23466777764 4677777777554
No 12
>PF01285 TEA: TEA/ATTS domain family; InterPro: IPR000818 Transcriptional enhancer activators are nuclear proteins that contain a TEA/ATTSdomain, a DNA-binding region of 66-68 amino acids. The TEA/ATTS domain is found in the N-termini of certain gene regulatory proteins, such as the Simian virus 40 (SV40) enhancer factor TEF-1, yeast trans-acting factor TEC-1 (which is required for TY1 enhancer activity), and the Aspergillus abaA regulatory gene product. SV40 and retroviral enhancers, and those to which TEF-1, TEC-1 and abaA proteins bind, contain GT-IIC sites: the TEA/ATTS domain may therefore recognise and bind such sites. Secondary structure predictions suggest the presence of 3 helices, but have not confirmed the presence of the helix-turn-helix motif characteristic of many DNA-binding proteins: DNA-binding may therefore be effected by a different mechanism [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3L15_B 2HZD_A 3KYS_A 3JUA_C 4EAZ_B.
Probab=51.29 E-value=19 Score=38.30 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=29.1
Q ss_pred CCCCCcccCHHHHHHHHHHHHhhCCCCCCchH--------------HHHhhcCCCCccHHHHHHHHhhh
Q 014973 263 AHKPRMRWTPELHECFVEAVNKLDGPEKATPK--------------AVLKLMNVEGLTIYHVKSHLQKY 317 (415)
Q Consensus 263 ~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK--------------~IL~lM~V~GLT~~hVKSHLQKY 317 (415)
+.+..-.|.+++...|++|+...=-..+++-+ .|...-| +-=|+.+|.||+|..
T Consensus 45 ~~~~~~vw~~~~e~af~~al~~~~~~g~~k~~~~~~~~grn~li~~yi~~~tg-~~rt~kqvsshiqvl 112 (431)
T PF01285_consen 45 DGDGEGVWPPDIEQAFQEALAIYPPCGRRKLSDEGKMYGRNELISDYIKLKTG-KTRTRKQVSSHIQVL 112 (431)
T ss_dssp -GGGS--S-HHHHHHHHHHHHHS-SSS---HHHH-----THHHHHHHHHHHHS-----SHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCCCcccccccccccchhHHHHHHHHHhC-cccchhHHHHHHHHH
Confidence 46788999999999999999876211122211 0111111 336788999999998
No 13
>smart00501 BRIGHT BRIGHT, ARID (A/T-rich interaction domain) domain. DNA-binding domain containing a helix-turn-helix structure
Probab=42.87 E-value=27 Score=28.65 Aligned_cols=46 Identities=15% Similarity=0.287 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhhCCCCCCc----hHHHHhhcCCCCc---cHHHHHHHHhhhh
Q 014973 272 PELHECFVEAVNKLDGPEKAT----PKAVLKLMNVEGL---TIYHVKSHLQKYR 318 (415)
Q Consensus 272 ~ELH~rFV~AV~qLGG~dkAt----PK~IL~lM~V~GL---T~~hVKSHLQKYR 318 (415)
-+|++-|. +|..+||.++.+ =+.|.+.||++.- ...++|+|-+||=
T Consensus 32 vdL~~Ly~-~V~~~GG~~~v~~~~~W~~Va~~lg~~~~~~~~~~~lk~~Y~k~L 84 (93)
T smart00501 32 LDLYRLYR-LVQERGGYDQVTKDKKWKEIARELGIPDTSTSAASSLRKHYERYL 84 (93)
T ss_pred CcHHHHHH-HHHHccCHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHHHHHHh
Confidence 57888888 599999987543 3568889998752 3456788777773
No 14
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.
Probab=32.24 E-value=62 Score=30.66 Aligned_cols=53 Identities=26% Similarity=0.347 Sum_probs=39.3
Q ss_pred CCCCCCCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcC-CCCccHHHHHHHHhhhhh
Q 014973 260 SATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMN-VEGLTIYHVKSHLQKYRL 319 (415)
Q Consensus 260 ~~~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~-V~GLT~~hVKSHLQKYRl 319 (415)
+.+....+|||+..+-.++.+||...- .-.|. .+. ...||+..|-+-||.|..
T Consensus 41 ~RTsAACGFRWNs~VRkqY~~~i~~AK----kqRk~---~~~~~~~ltl~~vI~fLq~l~~ 94 (161)
T TIGR02894 41 NRTAAACGFRWNAYVRKQYEEAIELAK----KQRKE---LKREAGSLTLQDVISFLQNLKT 94 (161)
T ss_pred cccHHHhcchHHHHHHHHHHHHHHHHH----HHHhc---cccCcccCCHHHHHHHHHHHHh
Confidence 445667899999999999999998651 11111 122 366999999999999874
No 15
>PF07384 DUF1497: Protein of unknown function (DUF1497); InterPro: IPR009972 This entry is represented by Bacteriophage r1t, Orf17. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins of around 59 residues in length. Members of this family seem to be found exclusively in Lactococcus lactis and the bacteriophages that infect this organism. The function of this family is unknown.
Probab=28.56 E-value=49 Score=26.38 Aligned_cols=21 Identities=29% Similarity=0.593 Sum_probs=18.8
Q ss_pred ccCHHHHHHHHHHHHhhCCCC
Q 014973 269 RWTPELHECFVEAVNKLDGPE 289 (415)
Q Consensus 269 rWT~ELH~rFV~AV~qLGG~d 289 (415)
.+..|+|..|-+-|.+|||-+
T Consensus 37 kfnqem~aefheri~klggk~ 57 (59)
T PF07384_consen 37 KFNQEMQAEFHERIKKLGGKN 57 (59)
T ss_pred HhhHHHHHHHHHHHHHhcccc
Confidence 578999999999999999854
No 16
>PF11888 DUF3408: Protein of unknown function (DUF3408); InterPro: IPR021823 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 128 to 160 amino acids in length.
Probab=20.83 E-value=1.9e+02 Score=25.81 Aligned_cols=47 Identities=23% Similarity=0.313 Sum_probs=29.6
Q ss_pred CCCCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCccHHHHHHHHhhhhhh
Q 014973 263 AHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLA 320 (415)
Q Consensus 263 ~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYRl~ 320 (415)
.+++ +-=..|+|++....|..+|| .+.|--++++- =++-||..||--
T Consensus 79 ~R~~-vyI~~e~h~~l~~Iv~~ig~-~~~si~~yidN---------IL~~Hle~~~ee 125 (136)
T PF11888_consen 79 ARKG-VYISRETHERLSRIVRVIGE-RKMSISGYIDN---------ILRHHLEEYREE 125 (136)
T ss_pred CCee-eEECHHHHHHHHHHHHHHCC-CCCcHHHHHHH---------HHHHHHHHHHHH
Confidence 3444 66678888888877777764 33333333322 268899998864
Done!