Query 014974
Match_columns 415
No_of_seqs 154 out of 549
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:26:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014974.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014974hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4epl_A Jasmonic acid-amido syn 100.0 2.3E-97 8E-102 784.2 38.9 383 18-409 188-577 (581)
2 4b2g_A GH3-1 auxin conjugating 100.0 4.5E-96 2E-100 777.1 35.8 390 18-409 189-585 (609)
3 4eql_A 4-substituted benzoates 100.0 1.1E-95 4E-100 772.7 30.8 387 18-409 183-579 (581)
4 3qov_A Phenylacetate-coenzyme 99.2 1.8E-10 6.2E-15 116.9 17.3 221 108-370 186-421 (436)
5 2y27_A Phenylacetate-coenzyme 99.2 1.4E-10 4.6E-15 117.9 16.3 218 108-369 190-422 (437)
6 2y4o_A Phenylacetate-coenzyme 99.2 4.5E-10 1.5E-14 114.2 19.6 218 108-369 192-426 (443)
7 3etc_A AMP-binding protein; ad 98.7 6E-07 2.1E-11 94.8 19.6 130 131-282 340-496 (580)
8 2d1s_A Luciferase, luciferin 4 98.5 9.7E-07 3.3E-11 92.3 15.8 131 131-282 308-462 (548)
9 2v7b_A Benzoate-coenzyme A lig 98.5 2.1E-06 7.2E-11 89.0 17.4 127 133-282 301-450 (529)
10 4fuq_A Malonyl COA synthetase; 98.5 5.3E-06 1.8E-10 85.7 19.0 132 129-282 265-420 (503)
11 3e7w_A D-alanine--poly(phospho 98.5 1E-05 3.4E-10 83.6 20.7 133 128-283 256-420 (511)
12 3ni2_A 4-coumarate:COA ligase; 98.5 2.2E-06 7.6E-11 89.2 15.7 132 130-282 295-455 (536)
13 3c5e_A Acyl-coenzyme A synthet 98.4 4.3E-06 1.5E-10 87.9 17.3 129 131-282 321-477 (570)
14 3nyq_A Malonyl-COA ligase; A/B 98.4 2.6E-06 8.8E-11 88.2 15.0 153 108-282 251-427 (505)
15 1t5h_X 4-chlorobenzoyl COA lig 98.4 5.4E-06 1.9E-10 85.5 17.4 150 108-282 252-423 (504)
16 3kxw_A Saframycin MX1 syntheta 98.4 2.6E-06 9E-11 89.2 13.2 107 219-342 393-529 (590)
17 3ivr_A Putative long-chain-fat 98.4 4.4E-07 1.5E-11 93.7 7.1 128 132-283 272-422 (509)
18 3rix_A Luciferase, luciferin 4 98.4 9.8E-07 3.4E-11 92.1 9.8 133 131-283 306-461 (550)
19 1pg4_A Acetyl-COA synthetase; 98.3 1.6E-05 5.5E-10 85.0 18.9 228 131-404 377-645 (652)
20 3fce_A D-alanine--poly(phospho 98.3 6.7E-06 2.3E-10 84.9 14.5 132 129-283 258-421 (512)
21 3l8c_A D-alanine--poly(phospho 98.3 1.4E-05 4.9E-10 82.4 15.9 130 131-282 263-424 (521)
22 1mdb_A 2,3-dihydroxybenzoate-A 98.2 1.1E-05 3.8E-10 84.0 14.9 146 108-282 280-451 (539)
23 3gqw_A Fatty acid AMP ligase; 98.2 1.9E-05 6.7E-10 82.1 16.4 59 220-283 406-483 (576)
24 3g7s_A Long-chain-fatty-acid-- 98.2 3.6E-06 1.2E-10 87.9 10.7 150 108-282 276-460 (549)
25 1ry2_A Acetyl-coenzyme A synth 98.2 1.9E-05 6.5E-10 84.7 16.3 233 131-402 383-659 (663)
26 4gs5_A Acyl-COA synthetase (AM 98.2 4.5E-06 1.5E-10 82.8 9.7 134 108-284 131-273 (358)
27 3rg2_A Enterobactin synthase c 98.1 5.3E-06 1.8E-10 87.9 9.8 149 108-282 282-455 (617)
28 3o83_A Peptide arylation enzym 98.1 2.8E-06 9.6E-11 88.6 6.9 148 108-283 289-461 (544)
29 3r44_A Fatty acyl COA syntheta 98.1 3.2E-05 1.1E-09 80.1 14.5 127 131-282 283-434 (517)
30 3ite_A SIDN siderophore synthe 98.0 7.6E-06 2.6E-10 85.4 8.4 131 131-283 293-449 (562)
31 4gr5_A Non-ribosomal peptide s 98.0 1.8E-05 6.1E-10 83.0 11.1 146 108-283 311-491 (570)
32 3tsy_A Fusion protein 4-coumar 98.0 1.5E-05 5.3E-10 88.9 10.7 133 131-283 343-503 (979)
33 4dg8_A PA1221; ANL superfamily 98.0 1.5E-05 5E-10 85.0 9.8 132 131-282 275-440 (620)
34 1amu_A GRSA, gramicidin synthe 98.0 6.3E-05 2.1E-09 78.9 13.8 128 131-282 292-451 (563)
35 3hgu_A EHPF; phenazine, antibi 97.9 2.8E-05 9.4E-10 76.8 9.5 102 132-252 231-343 (369)
36 3ipl_A 2-succinylbenzoate--COA 97.9 0.00015 5E-09 74.4 14.6 137 108-282 259-419 (501)
37 1v25_A Long-chain-fatty-acid-C 97.6 0.00013 4.3E-09 76.0 9.1 149 108-283 275-457 (541)
38 2vsq_A Surfactin synthetase su 97.5 0.00017 5.9E-09 83.0 9.2 130 132-282 720-882 (1304)
39 3lax_A Phenylacetate-coenzyme 95.2 0.049 1.7E-06 44.0 7.1 89 262-369 2-93 (109)
40 3t5a_A Long-chain-fatty-acid-- 95.2 0.12 4.1E-06 51.9 11.5 41 130-173 309-356 (480)
41 3gxs_A Phenylacetate-coenzyme 94.7 0.078 2.7E-06 43.0 7.0 90 261-369 1-93 (109)
42 3onr_A Protein transport prote 77.0 11 0.00037 28.6 7.4 49 269-318 15-63 (72)
43 2cc6_A VNG1446H, dodecin; flav 74.6 12 0.00041 28.0 7.1 49 269-318 13-61 (68)
44 2ux9_A Dodecin; flavoprotein; 68.3 12 0.00042 28.0 5.9 49 269-318 15-63 (69)
45 2vxa_A Dodecin; flavoprotein, 68.1 12 0.00042 28.2 5.9 49 269-318 16-64 (72)
46 2yiz_A Dodecin; flavoprotein, 54.0 22 0.00075 26.6 5.0 49 269-318 15-63 (69)
47 2lc0_A Putative uncharacterize 33.7 54 0.0019 27.4 5.0 85 266-365 26-111 (132)
48 1vfg_A A-adding enzyme, poly A 27.6 97 0.0033 30.4 6.5 69 60-135 150-226 (390)
49 2ln7_A LPXTG-SITE transpeptida 24.5 32 0.0011 29.1 2.0 28 216-245 72-99 (147)
50 3oei_C RELK (toxin RV3358); to 23.9 23 0.0008 28.0 0.9 17 227-243 58-74 (96)
51 2k52_A Uncharacterized protein 23.6 1.7E+02 0.0057 21.6 5.8 26 238-263 45-72 (80)
52 3g5o_B Uncharacterized protein 22.7 93 0.0032 24.3 4.3 23 232-254 63-85 (102)
53 3g66_A Sortase C; pilus, trans 22.3 51 0.0017 29.9 3.0 28 216-245 125-152 (212)
54 3isy_A Bsupi, intracellular pr 21.9 37 0.0013 28.1 1.8 25 220-244 38-64 (120)
55 3mwb_A Prephenate dehydratase; 20.8 3.4E+02 0.012 25.8 8.7 64 250-319 177-253 (313)
56 1t2w_A Sortase; transpeptidase 20.7 61 0.0021 27.1 3.0 28 216-245 71-98 (145)
57 2vjv_A Transposase ORFA; DNA-b 20.2 3.8E+02 0.013 22.3 10.9 96 266-377 36-134 (159)
58 1x7v_A PA3566 protein, APC5058 20.0 2.7E+02 0.0092 20.5 8.9 74 273-364 20-96 (99)
No 1
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=100.00 E-value=2.3e-97 Score=784.15 Aligned_cols=383 Identities=34% Similarity=0.657 Sum_probs=355.7
Q ss_pred ccccccCccccccCCChHHHHHHHHHhccccCCCcceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHH
Q 014974 18 QLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQLCDDLENGYPCLDITEVAMRD 97 (415)
Q Consensus 18 ~~~~~~~P~ev~~~~d~~~~~Y~~Ll~aL~~~~~v~~i~~~f~~~l~~~~~~le~~w~~l~~dI~~Gt~~~~i~~~~~r~ 97 (415)
....||+|.+++.++|..+++||||||||.++++|.+|+++||++|+++++.|+++|++||+||++||++++++++++|+
T Consensus 188 ~~~~~t~P~e~i~~~D~~~~~Y~~Ll~~L~~~~~v~~i~a~fas~ll~~~~~l~~~We~l~~dI~~gtl~~~it~~~~R~ 267 (581)
T 4epl_A 188 ITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRITVPSVRT 267 (581)
T ss_dssp GSCCBSSCHHHHTCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTCCCHHHHH
T ss_pred hhhcccCCHHHhcCCCHHHHHHHHHHHhhhccccccEEeeccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCHHHHH
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHhcCC-CCCCcccccCCCCceEEEEecCChHHHHHHHHHhhCCCCccccccccCceEEEee
Q 014974 98 SVIEVLGGPQPDLSKRIRSICGES-NWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAGEVPVLGGDYFASECYVGIN 176 (415)
Q Consensus 98 ~l~~~lg~p~p~~A~~L~~~~~~~-g~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~ 176 (415)
+|++++ +|+|.+|++|+++|++. +|.|++++|||||++|+||++|+|++|+++|++|+|++|+++++|+||||+||+|
T Consensus 268 ~l~~v~-~p~~~~a~~l~~~~~~~~~~~g~i~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~ 346 (581)
T 4epl_A 268 AMSKLL-TPNPELAETIRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAAN 346 (581)
T ss_dssp HHHTTC-CCCHHHHHHHHHHHHHSSTTTTHHHHHCTTCCCEEEECSGGGGGGHHHHHHHHTTSCEEECCEEETTEEEEEC
T ss_pred HHhCCC-CCCHHHHHHHHHHhCCCCccccCHHHhCCCCceEEEEeCCChHHHHHHHHHHcCCCccccCceeccceeeeee
Confidence 999999 89999999999999986 6999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccccceeeeeeCCEEEEeeecCCCcE
Q 014974 177 LDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQ 256 (415)
Q Consensus 177 ~~~~~~~~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~~GLyRYriGDvV~V~gf~~~~P~ 256 (415)
++|.+++++..|+|+|+.+||||||+++. +.+++++++++|||+|++|||||||++||||||+||+|+|+||+|++|+
T Consensus 347 ~~p~~~~~~~~~~L~p~~~ffEFiP~~~~--~~~~~~~v~l~eve~G~~YelviTt~~GL~RYr~GD~v~v~g~~~~~p~ 424 (581)
T 4epl_A 347 VTPRLSPEEATFAVIPNLGYFEFLPVSET--GEGEEKPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIGFYNNTPQ 424 (581)
T ss_dssp CCTTSCTTTCCEEECTTSCEEEEEEC---------CCCEEGGGCCTTCEEEEEEESTTSCSSEEEEEEEEEEEEETTEEE
T ss_pred cCCCCCccccceeecCCcEEEEEEecccc--cCCCCceeeHHHcCCCCeEEEEEeeccceeeEEcCCEEEEecccCCCcE
Confidence 99999998899999999999999998865 4456889999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHH
Q 014974 257 VEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRR 333 (415)
Q Consensus 257 i~F~gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~~ 333 (415)
|+|+||+++ +.|||++|++|++||.+|++.|++ +|++|.+||+++|.++.|+||++|||+.+. .+.+.+++
T Consensus 425 ~~~~gR~~~~l~~~Ge~~~~~~v~~al~~a~~~l~~-~~~~l~eft~~~d~~~~p~hyv~~wE~~~~-----~~~~~l~~ 498 (581)
T 4epl_A 425 LKFICRRNLILSINIDKNTERDLQLSVESAAKRLSE-EKIEVIDFSSYIDVSTDPGHYAIFWEISGE-----TNEDVLQD 498 (581)
T ss_dssp EEEEEETTCCBCSSSCCBCHHHHHHHHHHHHHHHHT-TTCCEEEEEEEEECSSSSCEEEEEEEESSC-----CCHHHHHH
T ss_pred EEEEeecCCeEEeeeeECCHHHHHHHHHHHHHhhcc-cCCeEEEEEEecCCCCCCCcEEEEEeecCC-----CCHHHHHH
Confidence 999999998 999999999999999999987866 899999999999888889999999999642 45678999
Q ss_pred HHHHHHHHh-ChhHHHhhhcCCCCCeEEEEcCCChHHHHHHHHHhcCCCCCCCCCCccc--CCHHHHHHHhccceEEEe
Q 014974 334 CCSSLEDAF-GSIYKVQRDRGEISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIV--RNREIVEFMEGCSLVTVR 409 (415)
Q Consensus 334 ~~~~ld~~L-n~~Y~~~R~~g~l~p~~v~~v~~Gtf~~~~~~~~~~G~~~~Q~K~Pr~~--~~~~~~~~L~~~~~~~~~ 409 (415)
||..||++| |++|+.+|..|+|+|++|++|++|+|++|+++++++|++.+|||+|||+ ++++++++|+++|++++.
T Consensus 499 ~~~~Ld~~L~n~~Y~~~R~~~~L~pl~v~~v~~G~F~~l~~~~~~~G~~~~Q~K~PR~~~~~~~~~~~~L~~~v~~~~~ 577 (581)
T 4epl_A 499 CCNCLDRAFIDAGYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSNAKVLQILCENVVSSYF 577 (581)
T ss_dssp HHHHHHHHCCCHHHHHHHHHTSSCCCEEEEECTTHHHHHHHHHHTTC------CCCSSCCTTCHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHhCChhHHHHHhcCCCCCcEEEEeCcchHHHHHHHHHhCCCCCCCcCCCeeecCCCHHHHHHHHhccccccc
Confidence 999999999 9999999999999999999999999999999999999999999999999 999999999999999875
No 2
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=100.00 E-value=4.5e-96 Score=777.10 Aligned_cols=390 Identities=33% Similarity=0.670 Sum_probs=347.6
Q ss_pred ccccccCccccccCCChHHHHHHHHHhccccCCCcceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHH
Q 014974 18 QLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQLCDDLENGYPCLDITEVAMRD 97 (415)
Q Consensus 18 ~~~~~~~P~ev~~~~d~~~~~Y~~Ll~aL~~~~~v~~i~~~f~~~l~~~~~~le~~w~~l~~dI~~Gt~~~~i~~~~~r~ 97 (415)
+.+.|++|.+++.++|..+++||||||||.++++|+.|+++|++++++++++|+++|++||+||++||++++++++++|.
T Consensus 189 ~~~~~~sP~~~i~~~D~~~~~Y~~Ll~~L~~~~~v~~lsa~fa~~ll~~~~~L~~~Weel~~dI~~gtl~~~it~~~~r~ 268 (609)
T 4b2g_A 189 PYNVYTSPNEAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTHDIRTGTLSPKITDPSVRN 268 (609)
T ss_dssp TTCCBSSCHHHHHCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTCCCHHHHH
T ss_pred hhhcccCcHHHhcCcCHHHHHHHHHHHHhhcccccceeeehhHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCChHHHHHHHHHhhCCCCccccccccCceEEEeeC
Q 014974 98 SVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAGEVPVLGGDYFASECYVGINL 177 (415)
Q Consensus 98 ~l~~~lg~p~p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~ 177 (415)
+|++++ +|+|++|++|+++|++.+|.|++++|||||++|+||++|+|++|+++|++|+|++|+++++|+||||+||+|+
T Consensus 269 a~~~~l-sp~~~la~~l~~~~~~~~~~g~i~~lWPnlk~l~~~~tG~~~~Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~~ 347 (609)
T 4b2g_A 269 CVAGVL-KPDPELADLVAGECSKDNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTMYASSECYFGLNL 347 (609)
T ss_dssp HTTTTC-CCCHHHHHHHHHHHTSSCCTTTHHHHSTTCCEEEEECSGGGGGGHHHHHHHHTSCCEECCEEECSSCEEEECS
T ss_pred HHhcCC-CcCHHHHHHHHHHhCCCccccCHHHhCCCCcEEEEEccCChHHHHHHHHHHcCCCccccCcccccceeeeeec
Confidence 999999 7999999999999998789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceeeecCCceEEEeeeCCccc---ccccCCceeecCCcccCceEEEEeccccceeeeeeCCEEEEeeecCCC
Q 014974 178 DIAQPPQTTRFVMLPTAAYFEFLPFDMEK---NEAVGEETVDFSGVEIGKMYEVVVTTYRGFYRYRLGDIVKVVDFYNSS 254 (415)
Q Consensus 178 ~~~~~~~~~~~~l~~~~~ffEFIp~~~~~---~~~~~~~~l~l~ele~G~~YelVvTt~~GLyRYriGDvV~V~gf~~~~ 254 (415)
+|.|+|+...|+|+|+.+||||||+++.+ .+.+++++++++|||+|++|||||||++||||||+||+|+|+||+|++
T Consensus 348 ~p~~~p~~~~~~L~p~~~ffEFIP~~~~~~~~~~~~~~~~v~l~eVe~G~~YelViTt~~GL~RYr~GD~v~v~~f~~~~ 427 (609)
T 4b2g_A 348 NPMSKPSEVSYTIMPNMAYFEFLPHEHSSIPLSRDSPPRLVDLAHVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSA 427 (609)
T ss_dssp CTTSCGGGCCEEECTTSCEEEEEEGGGTTSCCCSSSCCCCEEGGGCCTTCEEEEEEECTTSCCSEEEEEEEEEEEEETTE
T ss_pred CCCCCcccCceeecCCcEEEEEEeccccccccccCCCCccccHhHcCCCCeEEEehhhhhhhhheecCCEEEEeecCCCC
Confidence 99999888899999999999999987631 034568899999999999999999999999999999999999999999
Q ss_pred cEEEEEeeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHH
Q 014974 255 PQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAIL 331 (415)
Q Consensus 255 P~i~F~gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l 331 (415)
|+|+|+||+++ +.|||++|++|++||.+|++.|++ +|++|.+||+++|.++.||||++|||+........++++.+
T Consensus 428 p~i~~~gR~~~~l~~~Geki~~~~v~~av~~a~~~l~~-~g~~l~eft~~~d~~~~p~Hyv~~wEl~~~~~~~~~~~~~l 506 (609)
T 4b2g_A 428 PQFHFVRRKNVLLSIDSDKTDEAELQKAVDNASKLLRE-VNTSVVEYTSFADTKTIPGHYVIYWELLVKDSANSPSDELL 506 (609)
T ss_dssp EEEEEEEETTCCBCSSSCCBCHHHHHHHHHHHHHGGGG-TTEEEEEEEEEEECSSSSCEEEEEEEEEESCGGGCCCHHHH
T ss_pred cEEEEEEecCCeEEccccCCCHHHHHHHHHHHHHhhhc-cCCeEEEEEEecCCCCCCCcEEEEEEEecccccCCCCHHHH
Confidence 99999999998 999999999999999999976766 89999999999988888999999999962100123467899
Q ss_pred HHHHHHHHHHhChhHHHhh-hcCCCCCeEEEEcCCChHHHHHHHHHhcCCCCCCCCCCcccCCHHHHHHHhccceEEEe
Q 014974 332 RRCCSSLEDAFGSIYKVQR-DRGEISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEGCSLVTVR 409 (415)
Q Consensus 332 ~~~~~~ld~~Ln~~Y~~~R-~~g~l~p~~v~~v~~Gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~~~~~~~ 409 (415)
++||..||++||++|+.+| ..++|+|++|++|++|+|++|+++++++|++.+|||+|||+++++++++|+++|++++.
T Consensus 507 ~~~~~~LD~~LN~~Y~~~R~~~~~L~pl~v~~v~~GtF~~~~~~~~~~G~~~gQ~K~PR~~~~~~~~~~L~~~v~~~~~ 585 (609)
T 4b2g_A 507 GQCCLAMEESLNSVYRQGRVADNSIGPLEIRVVKSGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSSHF 585 (609)
T ss_dssp HHHHHHHHHHSCHHHHHHHHTSCCSCCCEEEEECTTCSCC----------------CCSSCC--CCHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHhCHHHHHHhhcCCccCCcEEEEeCCCcHHHHHHHHHhCCCCCCCcCCCcccCCHHHHHHHHhccccccc
Confidence 9999999999999999999 55699999999999999999999999999999999999999999999999999999875
No 3
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=100.00 E-value=1.1e-95 Score=772.66 Aligned_cols=387 Identities=34% Similarity=0.691 Sum_probs=304.3
Q ss_pred ccccccCccccccCCChHHHHHHHHHhccccCCCcceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHH
Q 014974 18 QLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQLCDDLENGYPCLDITEVAMRD 97 (415)
Q Consensus 18 ~~~~~~~P~ev~~~~d~~~~~Y~~Ll~aL~~~~~v~~i~~~f~~~l~~~~~~le~~w~~l~~dI~~Gt~~~~i~~~~~r~ 97 (415)
+...|++|.+++.++|..+++||||||||.++++|+.|+++|+++++++++.|+++|++||+||++||++++++++++|.
T Consensus 183 ~~~~~~~P~~~i~~~d~~~~~Y~~ll~~L~~~~~v~~isa~fa~~ll~~~~~L~~~weel~~dI~~gtl~~~it~~~~r~ 262 (581)
T 4eql_A 183 WYYSYTSPDEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELCSNIRSGHLSNWVTDLGCQN 262 (581)
T ss_dssp GGGCBSSCHHHHHCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTCCCHHHHH
T ss_pred hhhcccCchHhhcCCCHHHHHHHHHHHHhhcccccceeeehhHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCcChHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCChHHHHHHHHHhhCCCCccccccccCceEEEeeC
Q 014974 98 SVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAGEVPVLGGDYFASECYVGINL 177 (415)
Q Consensus 98 ~l~~~lg~p~p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~ 177 (415)
++.++|..|||++|++|+++|++.+|.|++++|||||++|+||++|+|++|+++|++|+|++|+++++|+||||+||+|+
T Consensus 263 ~~~~~L~~P~p~~A~~l~~~~~~~~~~g~i~~lWPnl~~l~~~~~G~~~~Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~~ 342 (581)
T 4eql_A 263 SVSLVLGGPRPELADTIEEICNQNSWKGIVKRLWPNTKYIETVVTGSMGQYVPMLNYYCNDLPLVSTTYGSSETTFGINL 342 (581)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHTSSCCTTHHHHHSTTCCEEEEECSGGGGGGHHHHHHHHTTCCEECCEEECSSCEEEECS
T ss_pred HHHHHhcCCCHHHHHHHHHHhcCCCccCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCccccCccccccceeeecc
Confidence 99999955999999999999998779999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccccceeeeeeCCEEEEeeecCCCcEE
Q 014974 178 DIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQV 257 (415)
Q Consensus 178 ~~~~~~~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~~GLyRYriGDvV~V~gf~~~~P~i 257 (415)
++.|++++..|+|+|+.+||||||+++. +++++++++|||+|++|||||||++||||||+||+|+|+||++++|+|
T Consensus 343 ~p~~~~~~~~~~L~~~~~ffEFip~~~~----~~~~~v~l~eVe~G~~YelViTt~~GL~RYr~GD~v~v~~f~~~~p~i 418 (581)
T 4eql_A 343 DPLCKPEDVSYTFMPNMSYFEFIPMDGG----DKNDVVDLEDVKLGCTYEPVVTNFAGLYRMRVGDIVLVTGFYNNAPQF 418 (581)
T ss_dssp CTTSCGGGCCEEECTTSSEEEEEECSTT----CCSSCEEGGGCCTTCEEEEEEECSSSCCSEECCEEEEEEEEETTEEEE
T ss_pred CCCCCcccCceeecCCcEEEEEEecccc----CCCcEeCHHHcCCCceEEEEEeeccceeeEEcCCEEEEcccCCCCcEE
Confidence 9999988788999999999999998753 357899999999999999999999999999999999999999999999
Q ss_pred EEEeeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCc------cccCCCH
Q 014974 258 EFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGC------TKLRDSV 328 (415)
Q Consensus 258 ~F~gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~------~~~~~~~ 328 (415)
+|+||.++ +.|||++|++|++||.+|++.|++ +|++|.+||+++|.++.|+||++|||+.... ....+++
T Consensus 419 ~f~gR~~~~l~~~Gekl~~~~v~~al~~a~~~l~~-~g~~l~eft~~~~~~~~p~Hy~~~wel~~~~~~~~~~~~~~~~~ 497 (581)
T 4eql_A 419 KFVRRENVVLSIDSDKTNEEDLFKAVSQAKLVLES-SGLDLKDFTSYADTSTFPGHYVVYLEVDTKEGEEKETAQFELDE 497 (581)
T ss_dssp EEEEETTEEECSSSCCEEHHHHHHHHHHC---------------CEEEECSSSSBEEEEECC---------------CCH
T ss_pred EEEEecCCEEEeeeeECCHHHHHHHHHHHHHhhhh-cCCEEEEEEEecCCCCCCCeEEEEEEEecccccccccccCCCCH
Confidence 99999998 999999999999999999866656 8999999999998888899999999985200 0012445
Q ss_pred HHHHHHHHHHHHHhChhHHHhh-hcCCCCCeEEEEcCCChHHHHHHHHHhcCCCCCCCCCCcccCCHHHHHHHhccceEE
Q 014974 329 AILRRCCSSLEDAFGSIYKVQR-DRGEISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEGCSLVT 407 (415)
Q Consensus 329 ~~l~~~~~~ld~~Ln~~Y~~~R-~~g~l~p~~v~~v~~Gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~~~~~ 407 (415)
+.+++||..||++||++|+.+| +.++|+|++|++|++|+|++|+++++++|++.||||+|||+++++++++|+++|+++
T Consensus 498 ~~l~~~~~~LD~~LN~~Y~~~R~~~~~L~pl~i~~v~~GtF~~~~~~~~~~G~~~gQ~K~PR~~~~~~~~~~L~~~v~~~ 577 (581)
T 4eql_A 498 EALSTCCLVMEESLDNVYKRCRFKDGSIGPLEIRVVRQGTFDSLMDFFISQGASTGQYKTPRCIKSGKALQVLETCVVAK 577 (581)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHTTCCBCCCEEEC--------------------------------------------C
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhcCCccCCcEEEEeCCCcHHHHHHHHHhCCCCCCCcCCCcccCCHHHHHHHHhcchhe
Confidence 7899999999999999999999 566999999999999999999999999999999999999999999999999999987
Q ss_pred Ee
Q 014974 408 VR 409 (415)
Q Consensus 408 ~~ 409 (415)
+.
T Consensus 578 ~~ 579 (581)
T 4eql_A 578 FF 579 (581)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 4
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.23 E-value=1.8e-10 Score=116.89 Aligned_cols=221 Identities=15% Similarity=0.193 Sum_probs=136.3
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC--hHHHHHHHHHhhCCCCccccccccCce-EEEeeCCCCCCCC
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASEC-YVGINLDIAQPPQ 184 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~aSEg-~igi~~~~~~~~~ 184 (415)
|.....|.+...+.+. ..-.+++++| +.+|. .+..+.++++.+| ++++ .+||+||+ ..++.... +..
T Consensus 186 P~~~~~l~~~~~~~~~----~~~~~~lr~i--~~gGe~l~~~~~~~~~~~~g-~~v~-~~YG~TE~~~~~~~~~~--~~~ 255 (436)
T 3qov_A 186 PSYAIRLAEVFQEEGI----DPRETTLKTL--VIGAEPHTDEQRRKIERMLN-VKAY-NSFGMTEMNGPGVAFEC--QEQ 255 (436)
T ss_dssp HHHHHHHHHHHHHTTC----CTTSSSCCEE--EEESSCCCHHHHHHHHHHHT-SEEE-EEEEEGGGTEEEEEEEC--TTC
T ss_pred HHHHHHHHHHHHHcCC----CcccCCccEE--EEeCCcCCHHHHHHHHHHhC-ccEE-ecCcchhhcCCeeEEec--CCC
Confidence 7777777776654332 2124678833 34443 2667788888885 8888 99999996 33232222 222
Q ss_pred CceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEecccc----ceeeeeeCCEEEEeeecC----CCcE
Q 014974 185 TTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYR----GFYRYRLGDIVKVVDFYN----SSPQ 256 (415)
Q Consensus 185 ~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~~----GLyRYriGDvV~V~gf~~----~~P~ 256 (415)
.+.. +......+|.+++++ +++ |..|+.+||+||+.. .+-||+|||++++..--| ..|+
T Consensus 256 ~g~~-~~~~~~~v~i~d~~~-------g~~-----~~~g~~Gel~v~~~~~~~~~~~~y~TGDl~~~~~~gc~cG~~~~~ 322 (436)
T 3qov_A 256 NGMH-FWEDCYLVEIIDPET-------GEP-----VPEGEIGELVLTTLDREMMPLIRYRTRDLTRILPGKCPCGRTHLR 322 (436)
T ss_dssp SSEE-ECTTTEEEEEECTTT-------CSB-----CSTTCCEEEEEEESSCCSSCCCSEEEEEEECEECSCCTTCCCSCE
T ss_pred CeeE-EccCceEEEEEECCC-------CCC-----CCCCCceEEEEeccCcCCceEEEEEcCCEEEEcCCCCCCCCCccc
Confidence 2444 333455789998654 333 458999999999752 256899999999976421 1566
Q ss_pred E-EEEeeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHH
Q 014974 257 V-EFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILR 332 (415)
Q Consensus 257 i-~F~gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~ 332 (415)
| .|+||.++ +.|+++++.+|++++.+. .++. ..+.+..+........+++++.. +. ...+....+
T Consensus 323 il~i~GR~dd~ik~~G~~v~p~eiE~~l~~~-------p~v~-~~~vv~~~~~~~~~~l~a~v~~~-~~--~~~~~~~~~ 391 (436)
T 3qov_A 323 IDRIKGRSDDMFIIKGVNIFPMQVEKILVQF-------PELG-SNYLITLETVNNQDEMIVEVELS-DL--STDNYIELE 391 (436)
T ss_dssp ECCCCCBSSSCEEETTEEECHHHHHHHHTTC-------TTEE-EEEEEEEEEETTEEEEEEEEEEC-TT--CCCCHHHHH
T ss_pred cCcccCccCCEEEECCEEECHHHHHHHHHhC-------cCcC-CcEEEEEEcCCCCcEEEEEEEEc-Cc--cccchhhHH
Confidence 7 99999998 889999999999988743 2222 13333332222234556788876 31 111122334
Q ss_pred HHHHHHHHHhChhHHHhhhcCCCCCeEEEEcCCChHHH
Q 014974 333 RCCSSLEDAFGSIYKVQRDRGEISPLSVSIVKPGTFDR 370 (415)
Q Consensus 333 ~~~~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~Gtf~~ 370 (415)
++.+.+.+.| +.. .-.|..+.+|+.+.|.+
T Consensus 392 ~l~~~l~~~l-------~~~-~~~p~~i~~v~~~~lP~ 421 (436)
T 3qov_A 392 KIRRDIIRQL-------KDE-ILVTPKVKLVKKGSLPQ 421 (436)
T ss_dssp HHHHHHHHHH-------HHH-HSSCCEEEEECTTCCC-
T ss_pred HHHHHHHHHH-------HHh-cCCceEEEEeCCCcccC
Confidence 4555555555 111 02456899999887763
No 5
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.23 E-value=1.4e-10 Score=117.86 Aligned_cols=218 Identities=13% Similarity=0.089 Sum_probs=134.7
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC--hHHHHHHHHHhhCCCCccccccccCce--E-EEeeCCCCCC
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASEC--Y-VGINLDIAQP 182 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~aSEg--~-igi~~~~~~~ 182 (415)
|.....|.+...+.+. ..-+++++.| +.+|. .+..++++++.+| ++++ ..||+||. . ++++..
T Consensus 190 Ps~~~~l~~~~~~~~~----~~~~~~lr~i--~~gGe~l~~~~~~~~~~~~g-~~v~-~~YG~TE~~g~~~~~~~~---- 257 (437)
T 2y27_A 190 PSYMLSIADEIERQGL----DPVQSSLRIG--IFGAEPWTNDMRVAIEQRMG-IDAV-DIYGLSEVMGPGVASECV---- 257 (437)
T ss_dssp HHHHHHHHHHHHHTTC----CGGGSSCCEE--EEESSCCCHHHHHHHHHHHT-SEEE-EEEEETTTTEEEEEECCT----
T ss_pred HHHHHHHHHHHHHcCC----CcccCCeeEE--EEcCccCCHHHHHHHHHHHC-cCEE-ecCCchhhcCCeeEEecC----
Confidence 7777777776543332 1125688843 34443 3667788888885 8888 99999994 3 555332
Q ss_pred CCC-ceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccccc----eeeeeeCCEEEEeeecC-CCcE
Q 014974 183 PQT-TRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYRG----FYRYRLGDIVKVVDFYN-SSPQ 256 (415)
Q Consensus 183 ~~~-~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~~G----LyRYriGDvV~V~gf~~-~~P~ 256 (415)
... +.. +.....++|++++++ +++ +..|+.+||+||+... +.||+|||++++....+ ..|+
T Consensus 258 ~~~~g~~-~~~~~~~~~i~d~~~-------g~~-----~~~g~~Gel~v~~~t~~~~~~~~y~TGDl~~~~~~~G~~~~~ 324 (437)
T 2y27_A 258 ETKDGPT-IWEDHFYPEIIDPET-------GEV-----LPDGELGELVFTSLTKEALPIIRYRTRDLTRLLPGTARTMRR 324 (437)
T ss_dssp TTCSSCE-ECTTTEEEEEECTTT-------CCB-----CCTTCCEEEEEEESSCSSSCCCSEEEEEEECEECCSSSSSCE
T ss_pred CCCCcee-EccCceEEEEEcCCC-------CCC-----CCCCCccEEEEecCCcCCchhheeecCCEEEEeCCCCCCccc
Confidence 211 333 333456889998653 333 4489999999997643 67999999999986323 4788
Q ss_pred E-EEEeeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHH
Q 014974 257 V-EFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILR 332 (415)
Q Consensus 257 i-~F~gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~ 332 (415)
| .|+||.++ +.|+++++.+|++++.+. + ++. ..+.+..+........+++++...+. ..+....+
T Consensus 325 i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~-p------~V~-~~~vv~~~~~~~~~~l~a~v~~~~~~---~~~~~~~~ 393 (437)
T 2y27_A 325 MEKITGRSDDMMIVRGVNVFPTQIEEQLLKQ-R------ALA-PHYQIVLTKEGPLDVLTLNVEPCPET---APDTAAIQ 393 (437)
T ss_dssp ECCCCEEGGGCEEETTEEECHHHHHHHHTTC-T------TBC-SCCEEEEEEETTEEEEEEEECBCTTT---TTCHHHHH
T ss_pred cCccccccCCeEEECCeEECHHHHHHHHHhC-c------CcC-ccEEEEEeecCCCceEEEEEEECCCc---cchhhhHH
Confidence 8 99999998 889999999999988753 1 221 12333222111134556788775320 01112233
Q ss_pred HHHHHHHHHhChhHHHhhhcCCCCCeEEEEcCCChHH
Q 014974 333 RCCSSLEDAFGSIYKVQRDRGEISPLSVSIVKPGTFD 369 (415)
Q Consensus 333 ~~~~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~Gtf~ 369 (415)
++.+.+.+.| ... .-.|..|.++..+.|.
T Consensus 394 ~l~~~l~~~l-------~~~-~~~p~~v~~v~~~~lP 422 (437)
T 2y27_A 394 VAKQALAYDI-------KSL-IGVTAVINVLPVNGIE 422 (437)
T ss_dssp HHHHHHHHHH-------HHH-HCCCEEEEECCTTCSC
T ss_pred HHHHHHHHHH-------HHh-cCCceEEEEeCCCCcc
Confidence 4445555555 111 0135678888776665
No 6
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.22 E-value=4.5e-10 Score=114.19 Aligned_cols=218 Identities=12% Similarity=0.088 Sum_probs=134.3
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC--hHHHHHHHHHhhCCCCccccccccCce--E-EEeeCCCCCC
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASEC--Y-VGINLDIAQP 182 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~aSEg--~-igi~~~~~~~ 182 (415)
|..+..|.+...+.+. ..-+++++.| +.+|. .+..++++++.+| ++++ ..||+||. . ++...... +
T Consensus 192 Ps~~~~l~~~~~~~~~----~~~~~~lr~i--~~gGe~l~~~~~~~~~~~~g-~~v~-~~YG~TE~~g~~~~~~~~~~-~ 262 (443)
T 2y4o_A 192 PSYMLNLIDEMVRQGM----DPAESSLKIG--IFGAEPWTQALRNEVETRVG-IDAL-DIYGLSEVMGPGVACECVET-K 262 (443)
T ss_dssp HHHHHHHHHHHHHTTC----CGGGSSCCEE--EEESSCCCHHHHHHHHHHHT-CEEE-EEEEETTTTEEEEEEECTTT-C
T ss_pred HHHHHHHHHHHHHcCC----CcccCCceEE--EECCCcCCHHHHHHHHHHhC-cCEE-eccCchhhcCCeEEeccCCC-C
Confidence 7777777776543332 1124688843 44443 2667788888885 8888 99999994 3 45543211 1
Q ss_pred CCCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccccc----eeeeeeCCEEEEeeec-C-CCcE
Q 014974 183 PQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYRG----FYRYRLGDIVKVVDFY-N-SSPQ 256 (415)
Q Consensus 183 ~~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~~G----LyRYriGDvV~V~gf~-~-~~P~ 256 (415)
.+.. +.....++|++++++ +++ +..|+.+||+||+... +-||+|||++++.. . + ..|+
T Consensus 263 --~g~~-~~~~~~~~~i~d~~~-------g~~-----~~~G~~Gel~v~~~t~~~~p~~~y~TGDl~~~~~-~cG~~~~~ 326 (443)
T 2y4o_A 263 --DGPV-IWEDHFYPEIIDPVT-------GEV-----LPDGSQGELVFTSLTKEAMPVIRYRTRDLTALLP-PTARAMRR 326 (443)
T ss_dssp --CSEE-ECTTTEEEEEECTTT-------CCB-----CCTTCCEEEEEEESSCSSSCCSSEEEEEEECEEC-CSSSSSCE
T ss_pred --CceE-EccCCeEEEEEcCCC-------CCC-----CCCCCceEEEEeCCCcccChhheeecCCEEEEcC-CCCCCccc
Confidence 1333 333456889998653 333 4489999999997633 56899999999987 3 3 2588
Q ss_pred E-EEEeeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeec--CccccCCCHHH
Q 014974 257 V-EFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIRE--GCTKLRDSVAI 330 (415)
Q Consensus 257 i-~F~gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~--~~~~~~~~~~~ 330 (415)
| .|+||.++ +.|+++++.+|++++.+. .++. ..+.+..+........+++++... +. ......
T Consensus 327 l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~-------p~V~-~~~vv~~~~~~~~~~~~a~v~~~~~~~~---~~~~~~ 395 (443)
T 2y4o_A 327 LAKITGRSDDMLIVRGVNVFPSQIEEIVVAL-------PLLS-GQFQITLSRDGHMDRLDLAVELRSEAAA---SVTDGE 395 (443)
T ss_dssp ECCCCEESSCCEEETTEEECHHHHHHHHHTS-------TTEE-EEEEEEEEEETTEEEEEEEEEECHHHHT---TCCHHH
T ss_pred cCccccccCCeEEECCEEECHHHHHHHHHhC-------cCcC-ccEEEEEecCCCCceEEEEEEECCcccc---cchhhH
Confidence 8 89999998 889999999999988743 2321 133333221111245567787643 10 001223
Q ss_pred HHHHHHHHHHHhChhHHHhhhcCCCCCeEEEEcCCChHH
Q 014974 331 LRRCCSSLEDAFGSIYKVQRDRGEISPLSVSIVKPGTFD 369 (415)
Q Consensus 331 l~~~~~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~Gtf~ 369 (415)
.+++.+.+.+.| ... .--|.+|.++..+.|.
T Consensus 396 ~~~l~~~l~~~l-------~~~-~~~p~~v~~v~~~~lP 426 (443)
T 2y4o_A 396 RAALARELQHRI-------KTM-VGVSSGVTVLAAGGIP 426 (443)
T ss_dssp HHHHHHHHHHHH-------HHH-TCCCCEEEEECTTCSC
T ss_pred HHHHHHHHHHHH-------HHH-hCCceEEEEeCCCccc
Confidence 344455555555 211 1135678888877765
No 7
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=98.70 E-value=6e-07 Score=94.76 Aligned_cols=130 Identities=21% Similarity=0.292 Sum_probs=86.6
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCC-CCceeeecCCceEEEeeeCCcccc
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP-QTTRFVMLPTAAYFEFLPFDMEKN 207 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~-~~~~~~l~~~~~ffEFIp~~~~~~ 207 (415)
+++|++ ++.+|. + +..+.++++.+| ++++ .+||.||+.+.+...+..+. ...+....|+. -++.++.+
T Consensus 340 l~~lr~--i~~gGe~l~~~~~~~~~~~~g-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~~~-~v~ivd~~---- 410 (580)
T 3etc_A 340 FSTLKY--AVVAGEPLNPEVFNRFLEFTG-IKLM-EGFGQTETVVTIATFPWMEPKPGSIGKPTPGY-KIELMDRD---- 410 (580)
T ss_dssp CTTCCE--EEECSSCCCHHHHHHHHHHHS-CCCE-EEECCTTSSCCEECCTTSCCCTTCCBEECTTC-EEEEECTT----
T ss_pred CccceE--EEEccCCCCHHHHHHHHHHhC-CeEe-cccccccccceeecCCCCCCCCCccccCCCCC-EEEEECCC----
Confidence 467883 344443 2 556677877776 8888 99999997443322221111 11233344544 35566533
Q ss_pred cccCCceeecCCcccCceEEEEeccc----cceee-----------------eeeCCEEEEeeecCCCcEEEEEeeCCC-
Q 014974 208 EAVGEETVDFSGVEIGKMYEVVVTTY----RGFYR-----------------YRLGDIVKVVDFYNSSPQVEFVMRAPK- 265 (415)
Q Consensus 208 ~~~~~~~l~l~ele~G~~YelVvTt~----~GLyR-----------------YriGDvV~V~gf~~~~P~i~F~gR~~~- 265 (415)
++. +..|+.+||+|++. .|+.+ |||||++++.. .-.+.|+||.++
T Consensus 411 ----g~~-----~~~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~~d~----dG~l~~~GR~dd~ 477 (580)
T 3etc_A 411 ----GRL-----CEVGEEGEIVINTMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAWMDE----DGYLWFVGRADDI 477 (580)
T ss_dssp ----SCB-----CCTTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEEECT----TSCEEEEEESSSC
T ss_pred ----CCC-----CCCCCceEEEEecCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEEECC----CCcEEEEecCCCE
Confidence 333 56899999999863 22433 99999998853 346899999998
Q ss_pred --cceeecCHHHHHHHHHH
Q 014974 266 --SSFEIISERDLMSAMES 282 (415)
Q Consensus 266 --l~gEkl~e~~v~~av~~ 282 (415)
+.|+++++.+|++++.+
T Consensus 478 Ik~~G~~I~p~eIE~~l~~ 496 (580)
T 3etc_A 478 IKTSGYKVGPFEVESALIQ 496 (580)
T ss_dssp EEETTEEECHHHHHHHHTT
T ss_pred EEECCEEECHHHHHHHHHh
Confidence 88999999999998875
No 8
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=98.55 E-value=9.7e-07 Score=92.32 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=87.5
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEE--EeeCCCCCCCCCceeeecCCceEEEeeeCCccc
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK 206 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~i--gi~~~~~~~~~~~~~~l~~~~~ffEFIp~~~~~ 206 (415)
+++|+. ++.+|. + ...++++++.+|+++++ .+||.||+.. ..+........ ......|+. -.+.+++++
T Consensus 308 l~~lr~--i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~-~~G~~~~~~-~~~i~d~~~-- 380 (548)
T 2d1s_A 308 LSNLVE--IASGGAPLSKEVGEAVARRFNLPGVR-QGYGLTETTSAIIITPEGDDKPG-ASGKVVPLF-KAKVIDLDT-- 380 (548)
T ss_dssp CTTCCE--EEECSSCCCHHHHHHHHHHTTCSCCE-EEEECGGGSSEEEECCTTCCCTT-CCBEECTTC-EEEEECTTT--
T ss_pred ccceeE--EEEcCccCCHHHHHHHHHHcCCCcee-eccccccccceeeecCcccCCCC-CCCccCCCc-eEEEEeCCc--
Confidence 467883 334443 2 66778888889888888 9999999632 23211111111 122234443 356666432
Q ss_pred ccccCCceeecCCcccCceEEEEeccc---ccee--------------eeeeCCEEEEeeecCCCcEEEEEeeCCC---c
Q 014974 207 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 266 (415)
Q Consensus 207 ~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy--------------RYriGDvV~V~gf~~~~P~i~F~gR~~~---l 266 (415)
++. +..|+.+||+|+.. .|.| .|+|||++++.. .-.+.|+||.++ +
T Consensus 381 -----~~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~----dG~l~~~GR~~d~ik~ 446 (548)
T 2d1s_A 381 -----KKS-----LGPNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDE----EKHFFIVDRLKSLIKY 446 (548)
T ss_dssp -----CCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT----TCCEEEEEEGGGCBCB
T ss_pred -----Ccc-----CCCCCCeEEEECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEEcC----CCeEEEeccccceEEE
Confidence 233 55899999999873 2322 499999999853 236899999998 8
Q ss_pred ceeecCHHHHHHHHHH
Q 014974 267 SFEIISERDLMSAMES 282 (415)
Q Consensus 267 ~gEkl~e~~v~~av~~ 282 (415)
.|++++..+|++++.+
T Consensus 447 ~G~~v~p~eIE~~l~~ 462 (548)
T 2d1s_A 447 KGYQVPPAELESVLLQ 462 (548)
T ss_dssp TTCCBCHHHHHHHHHT
T ss_pred CCEEECHHHHHHHHHh
Confidence 8999999999999874
No 9
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=98.53 E-value=2.1e-06 Score=89.01 Aligned_cols=127 Identities=14% Similarity=0.121 Sum_probs=81.6
Q ss_pred CCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCce-EEEeeCCC-CCCCCCceeeecCCceEEEeeeCCccccc
Q 014974 133 NVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASEC-YVGINLDI-AQPPQTTRFVMLPTAAYFEFLPFDMEKNE 208 (415)
Q Consensus 133 ~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg-~igi~~~~-~~~~~~~~~~l~~~~~ffEFIp~~~~~~~ 208 (415)
.++ .++.+|. + ...+.++++.+| ++++ .+||.||+ .+.+...+ .+..+ ......|+. -.+.++.+
T Consensus 301 ~lr--~~~~gGe~l~~~~~~~~~~~~g-~~i~-~~YG~TE~~~~~~~~~~~~~~~~-~~G~p~~~~-~~~i~d~~----- 369 (529)
T 2v7b_A 301 AIR--ICTSAGEALPREIGERFTAHFG-CEIL-DGIGSTEMLHIFLSNRAGAVEYG-TTGRPVPGY-EIELRDEA----- 369 (529)
T ss_dssp CCC--EEEECSSCCCHHHHHHHHHHHS-CCEE-EEEECTTTSSEEEECCTTCCCTT-SCCEECTTC-EEEEECTT-----
T ss_pred ceE--EEEEcCCCCCHHHHHHHHHHhC-Ccee-eeEchhhcCceeeccccCCCccC-CcccCCCCC-EEEEECCC-----
Confidence 677 3344443 2 566678887775 8888 99999996 33332111 11111 122334444 45666532
Q ss_pred ccCCceeecCCcccCceEEEEeccc---cceee-------------eeeCCEEEEeeecCCCcEEEEEeeCCC---ccee
Q 014974 209 AVGEETVDFSGVEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFE 269 (415)
Q Consensus 209 ~~~~~~l~l~ele~G~~YelVvTt~---~GLyR-------------YriGDvV~V~gf~~~~P~i~F~gR~~~---l~gE 269 (415)
++. +..|+.+||+|+.. .|.|+ |++||++++.. .-.+.|+||.++ +.|+
T Consensus 370 ---g~~-----~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~~~----~G~l~~~GR~dd~ik~~G~ 437 (529)
T 2v7b_A 370 ---GHA-----VPDGEVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCRLP----NGCYVYAGRSDDMLKVSGQ 437 (529)
T ss_dssp ---SCB-----CCTTSCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEEEEECT----TSCEEEEEEGGGCBC----
T ss_pred ---CCC-----CCCCCccEEEEecCCcccccCCChHHHHHhhhcCCcccCceEEECC----CccEEEeCccCCeEEECCE
Confidence 333 55899999999874 45543 89999998763 347899999998 8899
Q ss_pred ecCHHHHHHHHHH
Q 014974 270 IISERDLMSAMES 282 (415)
Q Consensus 270 kl~e~~v~~av~~ 282 (415)
+++..+|++++.+
T Consensus 438 ~v~p~eIE~~l~~ 450 (529)
T 2v7b_A 438 YVSPVEVEMVLVQ 450 (529)
T ss_dssp CBCHHHHHHHHTT
T ss_pred EECHHHHHHHHHh
Confidence 9999999998874
No 10
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=98.48 E-value=5.3e-06 Score=85.67 Aligned_cols=132 Identities=14% Similarity=0.176 Sum_probs=86.6
Q ss_pred ccCCCCceEEEEecCC--hHHHHHHHHHhhCCCCccccccccCceEEEeeCC--CCCCCCCceeeecCCceEEEeeeCCc
Q 014974 129 KLWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLD--IAQPPQTTRFVMLPTAAYFEFLPFDM 204 (415)
Q Consensus 129 ~lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~--~~~~~~~~~~~l~~~~~ffEFIp~~~ 204 (415)
...+++++ ++.+|. ......++++.+| ++++ ..||.||+.+..... ....++ ......|+. -.+.++.++
T Consensus 265 ~~~~~lr~--~~~gg~~l~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~~~~~~~~~-~~G~p~~~~-~~~i~d~~~ 338 (503)
T 4fuq_A 265 ETTGHMRL--FISGSAPLLADTHREWSAKTG-HAVL-ERYGMTETNMNTSNPYDGDRVPG-AVGPALPGV-SARVTDPET 338 (503)
T ss_dssp TTTTTCCE--EEECSSCCCHHHHHHHHHHHS-CCEE-ECCEETTTEECBCCCSSSCCCTT-EEEEBCTTC-EEEEECTTT
T ss_pred cchhhcEE--EEECCCCCCHHHHHHHHHHhC-CCcc-ceEcccccCcccccCCCCCCcCC-ccccCCCCe-EEEEEECCC
Confidence 34567873 334443 2556677777776 7888 899999975533111 111111 122233443 355665432
Q ss_pred ccccccCCceeecCCcccCceEEEEeccc---cceee--------------eeeCCEEEEeeecCCCcEEEEEeeCCC--
Q 014974 205 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK-- 265 (415)
Q Consensus 205 ~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLyR--------------YriGDvV~V~gf~~~~P~i~F~gR~~~-- 265 (415)
++. +..|+.+||+|+.. .|.|. |||||++++.. .-.+.|+||.++
T Consensus 339 -------g~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~----dG~l~~~GR~dd~i 402 (503)
T 4fuq_A 339 -------GKE-----LPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDE----RGYVHILGRGKDLV 402 (503)
T ss_dssp -------CCB-----CCTTCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECT----TCEEEECCSSTTCE
T ss_pred -------CCC-----CcCCCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcC----CCcEEEEecCCCEE
Confidence 333 56899999999863 34432 99999999853 458999999998
Q ss_pred -cceeecCHHHHHHHHHH
Q 014974 266 -SSFEIISERDLMSAMES 282 (415)
Q Consensus 266 -l~gEkl~e~~v~~av~~ 282 (415)
++|++++..+|++++.+
T Consensus 403 k~~G~~v~p~eIE~~l~~ 420 (503)
T 4fuq_A 403 ITGGFNVYPKEIESEIDA 420 (503)
T ss_dssp EETTEEECHHHHHHHHHT
T ss_pred EECCEEECHHHHHHHHHh
Confidence 89999999999998874
No 11
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=98.47 E-value=1e-05 Score=83.60 Aligned_cols=133 Identities=13% Similarity=0.090 Sum_probs=87.9
Q ss_pred cccCCCCceEEEEecCC--hHHHHHHHHHhhCCCCccccccccCceEEEe---eCCC----CCCCCCceeeecCCceEEE
Q 014974 128 SKLWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGI---NLDI----AQPPQTTRFVMLPTAAYFE 198 (415)
Q Consensus 128 ~~lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~aSEg~igi---~~~~----~~~~~~~~~~l~~~~~ffE 198 (415)
....|.++. ++.+|. ......++++.+++++++ .+||.||+...+ .... .... .......|+. -.+
T Consensus 256 ~~~~~~l~~--~~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~~-~~~ 330 (511)
T 3e7w_A 256 QDLLPHADT--FMFCGEVLPVSVAKALLERFPKAKIF-NTYGPTEATVAVTSVEITNDVISRSES-LPVGFAKPDM-NIF 330 (511)
T ss_dssp TTTCTTCCE--EEECSSCCCHHHHHHHHHHCTTCEEE-ECCCCGGGSSCSEEEEECHHHHTTCSS-CCCBEECTTC-EEE
T ss_pred cccCCcccE--EEEecCCCCHHHHHHHHHHCCCcEEE-eCcccchheeeeeEEeccccccccCCc-CCCcceeCCC-EEE
Confidence 345678883 344453 266678888889889999 999999964321 1110 0100 0122233443 345
Q ss_pred eeeCCcccccccCCceeecCCcccCceEEEEeccc--------------------cceeeeeeCCEEEEeeecCCCcEEE
Q 014974 199 FLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY--------------------RGFYRYRLGDIVKVVDFYNSSPQVE 258 (415)
Q Consensus 199 FIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~--------------------~GLyRYriGDvV~V~gf~~~~P~i~ 258 (415)
.++.+ ++. +..|+.+||+|+.. .|-+.|+|||++++. .-.+.
T Consensus 331 i~d~~--------g~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~~-----dG~l~ 392 (511)
T 3e7w_A 331 IMDEE--------GQP-----LPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFIQ-----DGQIF 392 (511)
T ss_dssp EECTT--------SCB-----CCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEEE-----TTEEE
T ss_pred EECCC--------CCC-----CCCCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEcc-----CCeEE
Confidence 55532 333 55899999999853 233469999999872 24799
Q ss_pred EEeeCCC---cceeecCHHHHHHHHHHH
Q 014974 259 FVMRAPK---SSFEIISERDLMSAMESF 283 (415)
Q Consensus 259 F~gR~~~---l~gEkl~e~~v~~av~~a 283 (415)
|+||.++ +.|++++..+|++++.+.
T Consensus 393 ~~GR~~d~ik~~G~~v~p~eIE~~l~~~ 420 (511)
T 3e7w_A 393 CQGRLDFQIKLHGYRMELEEIEFHVRQS 420 (511)
T ss_dssp EEEESSSEEEETTEEEEHHHHHHHHHHS
T ss_pred EEccccCEEEECCEEeCHHHHHHHHHhC
Confidence 9999998 899999999999998753
No 12
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=98.47 E-value=2.2e-06 Score=89.17 Aligned_cols=132 Identities=12% Similarity=0.110 Sum_probs=87.9
Q ss_pred cCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceE--EEeeCC----CC-CCCCCceeeecCCceEEEee
Q 014974 130 LWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECY--VGINLD----IA-QPPQTTRFVMLPTAAYFEFL 200 (415)
Q Consensus 130 lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~--igi~~~----~~-~~~~~~~~~l~~~~~ffEFI 200 (415)
-.++|++ ++.+|. + ....+++++.+++++++ .+||.||+. ++.... +. ..++ ......|+. -.+.+
T Consensus 295 ~l~~lr~--i~~gGe~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~-~~G~~~~~~-~~~i~ 369 (536)
T 3ni2_A 295 DLSSLRM--IKSGGAPLGKELEDTVRAKFPQARLG-QGYGMTEAGPVLAMCLAFAKEPFDIKPG-ACGTVVRNA-EMKIV 369 (536)
T ss_dssp CCTTCCE--EEEESSCCCHHHHHHHHHHCTTSEEE-EEEECGGGSSEEEECGGGSSSCCCCCTT-CCCEECSSC-EEEEE
T ss_pred CCccceE--EEECCCCCCHHHHHHHHHHCCCCCcc-ccccccccchhhhcccccCCccccCCCC-CeeEeCCCc-EEEEE
Confidence 3578883 334443 2 56668888889889998 999999964 233211 10 0111 112234444 35666
Q ss_pred eCCcccccccCCceeecCCcccCceEEEEeccc---ccee--------------eeeeCCEEEEeeecCCCcEEEEEeeC
Q 014974 201 PFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRA 263 (415)
Q Consensus 201 p~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy--------------RYriGDvV~V~gf~~~~P~i~F~gR~ 263 (415)
++++ ++. +..|+.+||+|+.. .|.| .|||||++++.. .-.+.|+||.
T Consensus 370 d~~~-------~~~-----~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~----dG~l~~~GR~ 433 (536)
T 3ni2_A 370 DPET-------GAS-----LPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDD----DDELFIVDRL 433 (536)
T ss_dssp CTTT-------CCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT----TSCEEEEEEC
T ss_pred eCCC-------CcC-----CCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceEcccEEEEcC----CceEEEEecc
Confidence 6443 233 45899999999853 3333 299999998853 3478999999
Q ss_pred CC---cceeecCHHHHHHHHHH
Q 014974 264 PK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 264 ~~---l~gEkl~e~~v~~av~~ 282 (415)
++ +.|++++..+|++++.+
T Consensus 434 dd~ik~~G~~v~p~eIE~~l~~ 455 (536)
T 3ni2_A 434 KELIKYKGFQVAPAELEALLIA 455 (536)
T ss_dssp SCCEEETTEEECHHHHHHHHHT
T ss_pred cceEEECCEEECHHHHHHHHHh
Confidence 98 99999999999998874
No 13
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=98.44 E-value=4.3e-06 Score=87.95 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=83.9
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCC--CCCCCceeeecCCceEEEeeeCCccc
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFDMEK 206 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~--~~~~~~~~~l~~~~~ffEFIp~~~~~ 206 (415)
.++|+. ++.+|. + +..+.++++.+| ++++ .+||.||+.+.+-..+. ..++ ......|+. -.+.++.+
T Consensus 321 ~~~lr~--i~~gGe~l~~~~~~~~~~~~g-~~i~-~~YG~TE~~~~~~~~~~~~~~~~-~vG~p~~~~-~v~i~d~~--- 391 (570)
T 3c5e_A 321 FPHLQN--CVTVGESLLPETLENWRAQTG-LDIR-ESYGQTETGLTCMVSKTMKIKPG-YMGTAASCY-DVQIIDDK--- 391 (570)
T ss_dssp CTTCCE--EEEESSCCCHHHHHHHHHHHS-CCCE-EEEEETTTEEEEECCTTSCCCTT-CCCEECTTC-CEEEECTT---
T ss_pred cccceE--EEEcCCcCCHHHHHHHHHHhC-Cchh-hccchhhcccceecCcccccCCC-cccccCCCc-eEEEECCC---
Confidence 467883 344453 2 556677777775 8888 99999997543322211 1111 112233433 34555532
Q ss_pred ccccCCceeecCCcccCceEEEEec-----c---cccee-------------eeeeCCEEEEeeecCCCcEEEEEeeCCC
Q 014974 207 NEAVGEETVDFSGVEIGKMYEVVVT-----T---YRGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK 265 (415)
Q Consensus 207 ~~~~~~~~l~l~ele~G~~YelVvT-----t---~~GLy-------------RYriGDvV~V~gf~~~~P~i~F~gR~~~ 265 (415)
++. +..|+.+||+|+ . ..|.| .|++||++++.. .-.+.|+||.++
T Consensus 392 -----g~~-----~~~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDlg~~d~----dG~l~~~GR~dd 457 (570)
T 3c5e_A 392 -----GNV-----LPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRGIKDE----DGYFQFMGRADD 457 (570)
T ss_dssp -----SCB-----CCTTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEEEEECT----TSCEEEEEEGGG
T ss_pred -----CCC-----CCCCCCCeeEEeccCCCCchhhccccCChhHhhhhhcCCccccceeEEEcC----CceEEEEecCCC
Confidence 333 558999999997 2 13433 289999998763 346899999998
Q ss_pred ---cceeecCHHHHHHHHHH
Q 014974 266 ---SSFEIISERDLMSAMES 282 (415)
Q Consensus 266 ---l~gEkl~e~~v~~av~~ 282 (415)
+.|++++..+|++++.+
T Consensus 458 ~Ik~~G~~V~p~eIE~~l~~ 477 (570)
T 3c5e_A 458 IINSSGYRIGPSEVENALME 477 (570)
T ss_dssp CEEETTEEECHHHHHHHHHT
T ss_pred EEEECCEEECHHHHHHHHHh
Confidence 89999999999998874
No 14
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=98.43 E-value=2.6e-06 Score=88.16 Aligned_cols=153 Identities=18% Similarity=0.207 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCCC-
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQ- 184 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~~- 184 (415)
|.....|.+...... ......+++++ ++.+|. . .....++++.+| ++++ ..||.||+.+.....+.....
T Consensus 251 P~~~~~l~~~~~~~~---~~~~~l~~lr~--i~~gg~~l~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~~~~~~~~ 323 (505)
T 3nyq_A 251 PTMYHRIAETLPADP---ELAKALAGARL--LVSGSAALPVHDHERIAAATG-RRVI-ERYGMTETLMNTSVRADGEPRA 323 (505)
T ss_dssp HHHHHHHHHHGGGCH---HHHHHHHHCSE--EEECSSCCCHHHHHHHHHHHS-CCCE-EEEEETTTEEEEECCTTSCCCT
T ss_pred HHHHHHHHHhhhcCc---hhhcccccceE--EEECCCCCCHHHHHHHHHhcC-Ceee-cccchhhcccccccCCCCCCCC
Confidence 566666555443211 11223356663 333443 2 455577777776 7888 999999976544322221110
Q ss_pred CceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---cceee--------------eeeCCEEEE
Q 014974 185 TTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR--------------YRLGDIVKV 247 (415)
Q Consensus 185 ~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLyR--------------YriGDvV~V 247 (415)
.......|+. -.+.++.+ ++++. .+..|+.+||+|+.. .|.|. |||||++++
T Consensus 324 ~~vG~p~~~~-~~~i~d~~--------g~~~~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~ 392 (505)
T 3nyq_A 324 GTVGVPLPGV-ELRLVEED--------GTPIA--ALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVR 392 (505)
T ss_dssp TCCCEECTTC-EEEEC-------------CCC--CCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEE
T ss_pred CCcccCCCCC-EEEEECCC--------CCCcc--cCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEE
Confidence 1112233443 34555533 22222 234589999999864 34332 999999998
Q ss_pred eeecCCCcEEEEEeeCC-C---cceeecCHHHHHHHHHH
Q 014974 248 VDFYNSSPQVEFVMRAP-K---SSFEIISERDLMSAMES 282 (415)
Q Consensus 248 ~gf~~~~P~i~F~gR~~-~---l~gEkl~e~~v~~av~~ 282 (415)
.. .-.+.|+||.+ + +.|++++..+|++++.+
T Consensus 393 ~~----dG~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~~ 427 (505)
T 3nyq_A 393 DP----DGYVRIVGRKATDLIKSGGYKIGAGEIENALLE 427 (505)
T ss_dssp CT----TSCEEEEEESSCCCEEETTEEECHHHHHHHHTT
T ss_pred CC----CccEEEeCCccCceEEeCCEEECHHHHHHHHHH
Confidence 53 34689999974 4 89999999999998874
No 15
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=98.43 E-value=5.4e-06 Score=85.45 Aligned_cols=150 Identities=14% Similarity=0.115 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCCCC
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQT 185 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~~~ 185 (415)
|.....|.+...+.. -..-.++|+.| +.+|. + ...++++++.+| .+++ ..||.||+.+.+.... ...+
T Consensus 252 P~~~~~l~~~~~~~~----~~~~l~~lr~~--~~gG~~l~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~~-~~~~- 321 (504)
T 1t5h_X 252 PTHLDALAAAAAHAG----SSLKLDSLRHV--TFAGATMPDAVLETVHQHLP-GEKV-NIYGTTEAMNSLYMRQ-PKTG- 321 (504)
T ss_dssp HHHHHHHHHHHCCTT----CCCCCTTCCEE--EECCTTCCHHHHHHHHHHCC-SEEE-EEEEETTTEEEEEEES-CSSS-
T ss_pred hHHHHHHHhhhcccc----ccccCccccEE--EEcCCcCCHHHHHHHHHhcC-ccee-eeeccccccccccccC-CCCC-
Confidence 666777666552210 11124678833 33443 2 566678888787 7777 8999999854443211 1111
Q ss_pred ceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEec-cc---cceee-------------eeeCCEEEEe
Q 014974 186 TRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVT-TY---RGFYR-------------YRLGDIVKVV 248 (415)
Q Consensus 186 ~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvT-t~---~GLyR-------------YriGDvV~V~ 248 (415)
......++. -...++.+. ... ..+..|+.+||+|+ .. .|.|+ |||||++++.
T Consensus 322 ~~g~p~~~~-~~~i~~~~~-----~~~-----~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f~~g~~~TGDlg~~~ 390 (504)
T 1t5h_X 322 TEMAPGFFS-EVRIVRIGG-----GVD-----EIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWT 390 (504)
T ss_dssp SEEBCCTTC-CEEEECTTS-----CTT-----CBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEEEEEEEEC
T ss_pred ccccCCCCC-ceeEEeccC-----CCC-----CcCCCCCcceEEEeCCceeeceecCCchhhhhhhcCCccccCcEEEEC
Confidence 111122222 233444321 011 23668999999998 32 46665 9999999986
Q ss_pred eecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHH
Q 014974 249 DFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 249 gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~ 282 (415)
. .-.+.|+||.++ +.|++++..+|++++.+
T Consensus 391 ~----dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 423 (504)
T 1t5h_X 391 P----EGTVRILGRVDDMIISGGENIHPSEIERVLGT 423 (504)
T ss_dssp T----TSCEEEEEEGGGCEEETTEEECHHHHHHHHTT
T ss_pred C----CceEEEeCcccCEEEECCEEECHHHHHHHHHh
Confidence 3 236899999998 89999999999998874
No 16
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=98.36 E-value=2.6e-06 Score=89.18 Aligned_cols=107 Identities=11% Similarity=0.108 Sum_probs=67.9
Q ss_pred CcccCceEEEEeccc---ccee----------------------eeeeCCEEEEeeecCCCcEEEEEeeCCC---cceee
Q 014974 219 GVEIGKMYEVVVTTY---RGFY----------------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEI 270 (415)
Q Consensus 219 ele~G~~YelVvTt~---~GLy----------------------RYriGDvV~V~gf~~~~P~i~F~gR~~~---l~gEk 270 (415)
.+..|+.+||+|+.. .|.| .|||||++++.. + .+.|+||.++ +.|++
T Consensus 393 ~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~dd---G--~l~~~GR~dd~Ik~~G~~ 467 (590)
T 3kxw_A 393 PCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLHE---N--ELYVTGRIKDLIIIYGKN 467 (590)
T ss_dssp BCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEET---T--EEEEEEESSCHHHHHHHT
T ss_pred CCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEecCcEEEEEC---C--EEEEEcCccceEEECCEe
Confidence 466899999999873 2322 699999998762 2 5999999998 89999
Q ss_pred cCHHHHHHHHHHHHHHhhhccCceEEEEEE--eecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHh
Q 014974 271 ISERDLMSAMESFQMMLRNVMAVEIVEFAG--YTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAF 342 (415)
Q Consensus 271 l~e~~v~~av~~a~~~l~~~~g~~l~~f~~--~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~L 342 (415)
++..+|++++..... ++...+..+ ..+.. ...-+++++.... ..+....+++.+.+.+.|
T Consensus 468 v~p~eIE~~l~~~~~------~v~~~~~~v~~~~~~~--~~~~~~~v~~~~~----~~~~~~~~~l~~~l~~~l 529 (590)
T 3kxw_A 468 HYPQDIEFSLMHSPL------HHVLGKCAAFVIQEEH--EYKLTVMCEVKNR----FMDDVAQDNLFNEIFELV 529 (590)
T ss_dssp THHHHHHHHHHHSGG------GGGEEEEEEEEEEETT--EEEEEEEEEESCT----TCCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhcCc------cccCccEEEEEecCCC--CceEEEEEEeccc----cccchhHHHHHHHHHHHH
Confidence 999999999954322 222212222 22222 2445577777532 112233444555555555
No 17
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=98.36 E-value=4.4e-07 Score=93.71 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=70.4
Q ss_pred CCCceEEEEecCChHHHHHHHHHhhCCCCccccccccCceEE--EeeCCCCCCCCCceeeecCCceEEEeeeCCcccccc
Q 014974 132 PNVRYIKCVTTGSMSQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEA 209 (415)
Q Consensus 132 P~L~~i~~~~~G~~~~y~~~l~~~~g~v~~~~~~y~aSEg~i--gi~~~~~~~~~~~~~~l~~~~~ffEFIp~~~~~~~~ 209 (415)
+.++ .+.+|+.+..+.++++.+++++++ ..||.||+.. +....... +. ......|+. -.+.++.+
T Consensus 272 ~~lr---~~~~~g~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~-~~-~~G~p~~~~-~~~i~d~~------ 338 (509)
T 3ivr_A 272 ASLR---AVTGLDTPETIERFEATCPNATFW-ATFGQSETSGLSTFAPYRDR-PK-SAGRPLFWR-TVAVVDAE------ 338 (509)
T ss_dssp TTCC---EEEEECCHHHHHHHHHHCTTCEEE-EEEEEGGGTEEEEEEEGGGS-TT-SCCEECTTC-EEEEECTT------
T ss_pred hhhh---eecccCChHHHHHHHHhcCCCeEE-cccCccccccccccCccccC-CC-cccccCCCc-EEEEECCC------
Confidence 4666 334555557778888889889999 9999999632 22211111 11 122234443 35556533
Q ss_pred cCCceeecCCcccCceEEEEeccc---cceee-------------eeeCCEEEEeeecCCCcEEEEEeeC--CC---cce
Q 014974 210 VGEETVDFSGVEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRA--PK---SSF 268 (415)
Q Consensus 210 ~~~~~l~l~ele~G~~YelVvTt~---~GLyR-------------YriGDvV~V~gf~~~~P~i~F~gR~--~~---l~g 268 (415)
++. +..|+.+||+|+.. .|.|+ |||||++++.. .-.+.|+||. ++ ++|
T Consensus 339 --~~~-----~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~~~----dG~l~~~GR~d~~d~ik~~G 407 (509)
T 3ivr_A 339 --DRP-----LPPGEVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDMGRFDA----DGYLFYAGRAPEKELIKTGG 407 (509)
T ss_dssp --SCB-----CCTTCCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEEEEECT----TSCEEEEEEC----------
T ss_pred --CCC-----CCCCCceEEEEecCCccccccCCHHHhHHHhhcCCcccccEEEECC----CceEEEeCCCCcceeEEECC
Confidence 223 56899999999874 56665 99999998853 4569999998 64 889
Q ss_pred eecCHHHHHHHHHHH
Q 014974 269 EIISERDLMSAMESF 283 (415)
Q Consensus 269 Ekl~e~~v~~av~~a 283 (415)
++++..+|++++.+.
T Consensus 408 ~~v~p~eiE~~l~~~ 422 (509)
T 3ivr_A 408 ENVYPAEVEGALKQH 422 (509)
T ss_dssp ---------------
T ss_pred EEECHHHHHHHHHhC
Confidence 999999999998764
No 18
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=98.35 E-value=9.8e-07 Score=92.14 Aligned_cols=133 Identities=14% Similarity=0.087 Sum_probs=66.8
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCCC-CceeeecCCceEEEeeeCCcccc
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQ-TTRFVMLPTAAYFEFLPFDMEKN 207 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~~-~~~~~l~~~~~ffEFIp~~~~~~ 207 (415)
+++|+ .++.+|. + ....+++++.+|...++ .+||.||+...+-..+..... .......|+. -.+.+++++
T Consensus 306 l~~lr--~i~~gG~~l~~~~~~~~~~~~~~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~vG~~~~~~-~~~i~d~~~--- 378 (550)
T 3rix_A 306 LSNLH--EIASGGAPLSKEVGEAVAKRFHLPGIR-QGYGLTETTSAILITPEGDDKPGAVGKVVPFF-EAKVVDLDT--- 378 (550)
T ss_dssp CTTCC--EEEECSSCCCHHHHHHHHHHTTCSCCE-EEEECGGGSSEEEECCTTCCCTTEEEEECTTC-EEEEECTTT---
T ss_pred ccccc--EEEEecCCCCHHHHHHHHHHcCCCccc-cccCcCccccceecCCCCCCCCCCcccccCCc-EEEEEeCCC---
Confidence 56788 3344443 2 56668888888854466 999999964322222221111 1223334444 456666543
Q ss_pred cccCCceeecCCcccCceEEEEeccc---ccee--------------eeeeCCEEEEeeecCCCcEEEEEeeCCC---cc
Q 014974 208 EAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SS 267 (415)
Q Consensus 208 ~~~~~~~l~l~ele~G~~YelVvTt~---~GLy--------------RYriGDvV~V~gf~~~~P~i~F~gR~~~---l~ 267 (415)
++. +..|+.+||+|+.. .|.| .|+|||++++.. .-.+.|+||.++ +.
T Consensus 379 ----~~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~----dG~l~~~GR~dd~ik~~ 445 (550)
T 3rix_A 379 ----GKT-----LGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDE----DEHFFIVDRLKSLIKYK 445 (550)
T ss_dssp ----CCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT----TCCEEEC----------
T ss_pred ----CcC-----CCCCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeC----CceEEEEecchheeEEC
Confidence 233 55899999999863 3332 299999999853 347899999998 99
Q ss_pred eeecCHHHHHHHHHHH
Q 014974 268 FEIISERDLMSAMESF 283 (415)
Q Consensus 268 gEkl~e~~v~~av~~a 283 (415)
|++++..+|++++.+.
T Consensus 446 G~~v~p~eIE~~l~~~ 461 (550)
T 3rix_A 446 GYQVAPAELESILLQH 461 (550)
T ss_dssp ----------------
T ss_pred CEEECHHHHHHHHHhC
Confidence 9999999999999864
No 19
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=98.33 E-value=1.6e-05 Score=85.01 Aligned_cols=228 Identities=14% Similarity=0.111 Sum_probs=119.5
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhC--CCCccccccccCceEE--EeeCCCC--CCCCCceeeecCCceEEEeeeC
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAG--EVPVLGGDYFASECYV--GINLDIA--QPPQTTRFVMLPTAAYFEFLPF 202 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g--~v~~~~~~y~aSEg~i--gi~~~~~--~~~~~~~~~l~~~~~ffEFIp~ 202 (415)
.++|++| +.+|. . .....++++.+| +++++ .+||.||... ..+.... ..++. .....|+.. ...++.
T Consensus 377 l~sLr~i--~~gGe~l~~~~~~~~~~~~g~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~s-~G~p~~g~~-v~i~d~ 451 (652)
T 1pg4_A 377 RSSLRIL--GSVGEPINPEAWEWYWKKIGKEKCPVV-DTWWQTETGGFMITPLPGAIELKAGS-ATRPFFGVQ-PALVDN 451 (652)
T ss_dssp CTTCCEE--EEESSCCCHHHHHHHHHHTTTTCSCEE-EEBCCGGGSSCSBCCCTTTCCBCTTC-CBSBCTTCC-EEEECT
T ss_pred cCceEEE--EEecCCCCHHHHHHHHHHhCCCCCcEE-ccccCcccccceecCCCCCcCccCCc-cccCcCCCe-EEEECC
Confidence 4678843 33443 2 555677777776 38888 9999999642 2221100 00111 111233332 334432
Q ss_pred CcccccccCCceeecCCcccCceEEEEeccc-----ccee----------------eeeeCCEEEEeeecCCCcEEEEEe
Q 014974 203 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEFVM 261 (415)
Q Consensus 203 ~~~~~~~~~~~~l~l~ele~G~~YelVvTt~-----~GLy----------------RYriGDvV~V~gf~~~~P~i~F~g 261 (415)
+ ++. +..|+.+||+|+.. .|.| -|++||++++.. .-.+.|+|
T Consensus 452 ~--------g~~-----v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~----dG~l~i~G 514 (652)
T 1pg4_A 452 E--------GHP-----QEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDE----DGYYWITG 514 (652)
T ss_dssp T--------CCB-----CCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECT----TSCEEEEE
T ss_pred C--------CCC-----cCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEcC----CCcEEEEe
Confidence 2 233 55799999999872 2222 289999999863 23689999
Q ss_pred eCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHH
Q 014974 262 RAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSS 337 (415)
Q Consensus 262 R~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~-d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~~~~~~ 337 (415)
|.++ +.|+++...+|++++.+. -+ +.+..++. +.......-+.|+.+..+ ...+.+..+++.+.
T Consensus 515 R~dd~Ik~~G~rI~~~eIE~~l~~~-------p~--V~ea~Vvg~~~~~~g~~l~a~Vv~~~~---~~~~~~~~~~l~~~ 582 (652)
T 1pg4_A 515 RVDDVLNVSGHRLGTAEIESALVAH-------PK--IAEAAVVGIPHAIKGQAIYAYVTLNHG---EEPSPELYAEVRNW 582 (652)
T ss_dssp ESSSEEEETTEEEEHHHHHHHHHHS-------TT--EEEEEEEEEEETTTEEEEEEEEEECTT---CCCCHHHHHHHHHH
T ss_pred cCCCEEEECCEEECHHHHHHHHHhC-------CC--cceEEEEEEEcCCCCeEEEEEEEECCC---CCCCHHHHHHHHHH
Confidence 9998 899999999999999742 12 34555433 111111234467766532 11222333444444
Q ss_pred HHHHhChhHHHhhhcCCCCCeEEEEcC------CChHHH--HHHHHHhcCCCCCCCCCCcccCCHHHHHHHhccc
Q 014974 338 LEDAFGSIYKVQRDRGEISPLSVSIVK------PGTFDR--LLQVAIEKGAPASQYKPPKIVRNREIVEFMEGCS 404 (415)
Q Consensus 338 ld~~Ln~~Y~~~R~~g~l~p~~v~~v~------~Gtf~~--~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~~ 404 (415)
+.+.| +.| ..|-.+.+|. .|-..+ +++. ..+. ..+++.+.-+.|++.++.+.+.+
T Consensus 583 l~~~l-~~~--------~~P~~i~~v~~lP~T~sGKi~R~~L~~~--~~~~-~~~~~~~~~l~~p~~~~~~~~~~ 645 (652)
T 1pg4_A 583 VRKEI-GPL--------ATPDVLHWTDSLPKTRSGKIMRRILRKI--AAGD-TSNLGDTSTLADPGVVEKLLEEK 645 (652)
T ss_dssp HHHHT-CGG--------GCCSEEEECSCCCBCTTSCBCHHHHHHH--HHTC-----------CCTTHHHHHHHHH
T ss_pred HHHhC-CCC--------cCCeEEEEcCCCCCCCCccchHHHHHHH--HhCC-CCCCCCccccCCHHHHHHHHHHh
Confidence 44444 112 3355566553 232222 2222 1221 23566777788999888886644
No 20
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=98.30 E-value=6.7e-06 Score=84.86 Aligned_cols=132 Identities=14% Similarity=0.140 Sum_probs=85.6
Q ss_pred ccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEE---eeCCCC----CCCCCceeeecCCceEEEe
Q 014974 129 KLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVG---INLDIA----QPPQTTRFVMLPTAAYFEF 199 (415)
Q Consensus 129 ~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~ig---i~~~~~----~~~~~~~~~l~~~~~ffEF 199 (415)
...|+++. ++.+|. + ....+++++.+++++++ .+||.||+... ...... .... ......++. -...
T Consensus 258 ~~~~~lr~--~~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~-~~G~~~~~~-~~~i 332 (512)
T 3fce_A 258 SMLPNMKT--FLFCGEVLPNEVARKLIERFPKATIM-NTYGPTEATVAVTGIHVTEEVLDQYKSL-PVGYCKSDC-RLLI 332 (512)
T ss_dssp TTSTTCCE--EEECSSCCCHHHHHHHHHHCTTCEEE-EEECCGGGSSCSEEEECCHHHHHHCSSC-CCEEECTTC-EEEE
T ss_pred hhCccccE--EEEecCcCCHHHHHHHHHHCCCCEEE-eCcccChhhhheeeEEeccccccccCCC-ccccccCCc-EEEE
Confidence 34578883 344553 2 56668888889889999 99999996432 221110 0000 111122332 2344
Q ss_pred eeCCcccccccCCceeecCCcccCceEEEEeccc---ccee-----------------eeeeCCEEEEeeecCCCcEEEE
Q 014974 200 LPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSSPQVEF 259 (415)
Q Consensus 200 Ip~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy-----------------RYriGDvV~V~gf~~~~P~i~F 259 (415)
++.+ ++. +..|+.+||+|+.. .|.| -|+|||++++ . .-.+.|
T Consensus 333 ~d~~--------g~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~-~----dG~l~i 394 (512)
T 3fce_A 333 MKED--------GTI-----APDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYV-E----NGLLFY 394 (512)
T ss_dssp ECSS--------SCB-----CCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEE-E----TTEEEE
T ss_pred ECCC--------CCC-----CCCCCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEe-c----CCEEEE
Confidence 4422 333 55899999999853 3333 3999999877 2 247999
Q ss_pred EeeCCC---cceeecCHHHHHHHHHHH
Q 014974 260 VMRAPK---SSFEIISERDLMSAMESF 283 (415)
Q Consensus 260 ~gR~~~---l~gEkl~e~~v~~av~~a 283 (415)
+||.++ +.|++++..+|++++.+.
T Consensus 395 ~GR~~d~ik~~G~~v~p~eIE~~l~~~ 421 (512)
T 3fce_A 395 NGRLDFQIKLHGYRMELEEIEHHLRAC 421 (512)
T ss_dssp EEEGGGCEEETTEEECHHHHHHHHHHS
T ss_pred ecccCCEEEECCEEECHHHHHHHHHhC
Confidence 999998 899999999999998753
No 21
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=98.26 E-value=1.4e-05 Score=82.44 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=80.7
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEe---eCCCC----CCCCCceeeecCCceEEEeee
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGI---NLDIA----QPPQTTRFVMLPTAAYFEFLP 201 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi---~~~~~----~~~~~~~~~l~~~~~ffEFIp 201 (415)
.|+++ .++.+|. + .....++.+.+++++++ .+||.||+.+.+ ..... .... ......|+. -.+.++
T Consensus 263 ~~~lr--~~~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~-~vG~p~~~~-~~~i~d 337 (521)
T 3l8c_A 263 MPALT--HFYFDGEELTVSTARKLFERFPSAKII-NAYGPTEATVALSAIEITREMVDNYTRL-PIGYPKPDS-PTYIID 337 (521)
T ss_dssp CTTCC--EEEECSSCCCHHHHHHHHHHCTTCEEE-EEECCGGGSSCSEEEEECHHHHHHCSSC-EEEEECTTS-CEEEEC
T ss_pred Cccce--EEEEecccCCHHHHHHHHHHCCCceEE-eCcCccHHhhhhceeecccccccCCCcc-ccccccCCC-EEEEEC
Confidence 56787 3344553 2 56667888888889999 999999964321 11100 0000 112233333 234454
Q ss_pred CCcccccccCCceeecCCcccCceEEEEeccc---ccee-----------------eeeeCCEEEEeeecCCCcEEEEEe
Q 014974 202 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSSPQVEFVM 261 (415)
Q Consensus 202 ~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy-----------------RYriGDvV~V~gf~~~~P~i~F~g 261 (415)
.+ ++ ++..|+.+||+|+.. .|.| -|+|||++++.. .-.+.|+|
T Consensus 338 ~~--------g~-----~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~----dG~l~~~G 400 (521)
T 3l8c_A 338 ED--------GK-----ELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTE----DNILLYGG 400 (521)
T ss_dssp TT--------SC-----BCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECS----SSCEEEEE
T ss_pred CC--------cC-----CCCCCCceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeC----CCeEEEeC
Confidence 32 22 356899999999873 3333 399999999854 34689999
Q ss_pred eCCC---cceeecCHHHHHHHHHH
Q 014974 262 RAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 262 R~~~---l~gEkl~e~~v~~av~~ 282 (415)
|.++ +.|++++..+|++++.+
T Consensus 401 R~~d~i~~~G~~v~p~eIE~~l~~ 424 (521)
T 3l8c_A 401 RLDFQIKYAGYRIELEDVSQQLNQ 424 (521)
T ss_dssp EGGGBCC-----CBHHHHHHHHHT
T ss_pred cccceEeECCEEeCHHHHHHHHHc
Confidence 9998 88999999999998874
No 22
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=98.25 E-value=1.1e-05 Score=83.96 Aligned_cols=146 Identities=16% Similarity=0.182 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCC--
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP-- 183 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~-- 183 (415)
|.....|.+..... ..-.++|+. ++.+|. . .....++++.+| ++++ .+||.||+.+.+... ..+.
T Consensus 280 P~~~~~l~~~~~~~------~~~l~~lr~--~~~gG~~l~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~-~~~~~~ 348 (539)
T 1mdb_A 280 PPLAMVWMDAASSR------RDDLSSLQV--LQVGGAKFSAEAARRVKAVFG-CTLQ-QVFGMAEGLVNYTRL-DDPEEI 348 (539)
T ss_dssp HHHHHHHHHHHHHC------CCCCTTCCE--EEEESSCCCHHHHTTHHHHTC-SEEE-EEEECTTSCEEECCT-TSCHHH
T ss_pred HHHHHHHHhCcccc------CCCccceeE--EEEcCCCCCHHHHHHHHHHhC-CcEE-EEEcCCCCcccccCC-CCcHHh
Confidence 56666655544321 112467883 334443 2 556677777776 8888 999999986655321 1110
Q ss_pred --CCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---ccee--------------eeeeCCE
Q 014974 184 --QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDI 244 (415)
Q Consensus 184 --~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy--------------RYriGDv 244 (415)
..... ..++..-...++.+ ++ .+..|+.+||+|+.. .|.| .|||||+
T Consensus 349 ~~~~~G~-p~~~~~~~~i~d~~--------~~-----~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl 414 (539)
T 1mdb_A 349 IVNTQGK-PMSPYDESRVWDDH--------DR-----DVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDI 414 (539)
T ss_dssp HHHCCCE-ESSTTCEEEEECTT--------SC-----BCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEE
T ss_pred cCCCCCc-ccCCCceEEEECCC--------CC-----CCcCCCcceEEeeCcccchhhcCChhhhhhhccCCCCeecCce
Confidence 00111 22232234445422 22 356899999999864 2322 3999999
Q ss_pred EEEeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHH
Q 014974 245 VKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 245 V~V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~ 282 (415)
+++.. .-.+.|+||.++ ++|++++..+|++++.+
T Consensus 415 g~~~~----dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 451 (539)
T 1mdb_A 415 VRLTR----DGYIVVEGRAKDQINRGGEKVAAEEVENHLLA 451 (539)
T ss_dssp EEECT----TSCEEEEEEGGGCEECSSCEECHHHHHHHHTT
T ss_pred EEECC----CCcEEEeccccceEEECCEEECHHHHHHHHHh
Confidence 99863 246999999998 89999999999998864
No 23
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=98.24 E-value=1.9e-05 Score=82.09 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=48.9
Q ss_pred cccCceEEEEeccc---cceee-------------eeeCCEEEEeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHH
Q 014974 220 VEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAM 280 (415)
Q Consensus 220 le~G~~YelVvTt~---~GLyR-------------YriGDvV~V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av 280 (415)
+..|+.+||+|... .|.|+ |||||++++ . .-.+.|+||.++ +.|++++..+|++++
T Consensus 406 ~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~-~----dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 480 (576)
T 3gqw_A 406 VAERVVGHICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYL-L----DGYLYVTGRIKDLIIIRGRNIWPQDIEYIA 480 (576)
T ss_dssp CCTTBCEEEEEESTTSCCCBTTCHHHHHHHHHHSCEEEEEEEEE-E----TTEEEEEEETTTCEEETTEEECHHHHHHHH
T ss_pred CCCCCeEEEEEeCccccccccCCccccccccCCCeeeccceEEE-E----CCEEEEEecCcceEEECCEEECHHHHHHHH
Confidence 55899999999864 44444 999999987 3 247999999998 899999999999988
Q ss_pred HHH
Q 014974 281 ESF 283 (415)
Q Consensus 281 ~~a 283 (415)
.+.
T Consensus 481 ~~~ 483 (576)
T 3gqw_A 481 EQE 483 (576)
T ss_dssp TTS
T ss_pred HhC
Confidence 754
No 24
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=98.23 E-value=3.6e-06 Score=87.86 Aligned_cols=150 Identities=14% Similarity=0.165 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC--hHHHHHHHHHh----hCC--CCccccccccCceEE--EeeC
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS--MSQYCSKIKYY----AGE--VPVLGGDYFASECYV--GINL 177 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~--~~~y~~~l~~~----~g~--v~~~~~~y~aSEg~i--gi~~ 177 (415)
|.....|.+.....+ ...-++.++++ +.+|. .....+++++. ++. ++++ ..||.||+.. ..+.
T Consensus 276 P~~~~~l~~~~~~~~----~~~~~~~lr~~--~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~ 348 (549)
T 3g7s_A 276 PPALNVLVNTLESSN----KTYDWSYLKVF--ATGAWPVAPALVEKLLKLAAEKCNNPRLRHN-QIWGMTEACPMVTTNP 348 (549)
T ss_dssp HHHHHHHHHHHHHSC----CCCCCTTCCEE--EEESSCCCHHHHHHHHHHHHHHSSCTTCEEE-EEEECGGGSSEEEECC
T ss_pred CHHHHHHHhhhhhhc----ccCCccceeEE--EeCCccCCHHHHHHHHHHHHhhcCCcccccc-ceEeccccchhhhcCC
Confidence 555566555443221 11235788833 33442 24555666665 553 7887 8999999633 2211
Q ss_pred CCC-CCCCCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---ccee----------------
Q 014974 178 DIA-QPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------- 237 (415)
Q Consensus 178 ~~~-~~~~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy---------------- 237 (415)
... ..+. ......|+. -.+.++.++ ++. +..|+.+||+|+.. .|.|
T Consensus 349 ~~~~~~~~-~~G~p~~~~-~~~i~d~~~-------g~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g 414 (549)
T 3g7s_A 349 PLRLDKST-TQGVPMSDI-ELKVISLED-------GRE-----LGVGESGEIVIRGPNIFKGYWKREKENQECWWYDEKG 414 (549)
T ss_dssp GGGGGGTT-SCCEECTTC-EEEEECSSS-------CCE-----ECTTCCEEEEEESTTSCSEETTCTTGGGTSEEECTTC
T ss_pred ccccCcCC-CccccCCCC-EEEEEeCCC-------CcC-----CCCCCceEEEEECcchhhhhCCChhhhhhhhhccCCC
Confidence 100 0111 112233443 356666443 333 45899999999863 2322
Q ss_pred --eeeeCCEEEEeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHH
Q 014974 238 --RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 238 --RYriGDvV~V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~ 282 (415)
.|||||++++.. .-.+.|+||.++ ++|++++..+|++++.+
T Consensus 415 ~~~~~TGDl~~~~~----dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 460 (549)
T 3g7s_A 415 RKFFRTGDVGFIDE----EGFLHFQDRVKEVIKYKGYTIAPFELEALLMK 460 (549)
T ss_dssp CEEEEEEEEEEECT----TSCEEEEEEC------------CHHHHHHHTT
T ss_pred CceEccCcEEEEcC----CceEEEeccccceEEECCEEECHHHHHHHHHh
Confidence 699999998853 457999999998 99999999999998874
No 25
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=98.22 E-value=1.9e-05 Score=84.69 Aligned_cols=233 Identities=14% Similarity=0.110 Sum_probs=117.1
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhC--CCCccccccccCceE--EEeeCC-CCC--CCCCceeeecCCceEEEeee
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAG--EVPVLGGDYFASECY--VGINLD-IAQ--PPQTTRFVMLPTAAYFEFLP 201 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g--~v~~~~~~y~aSEg~--igi~~~-~~~--~~~~~~~~l~~~~~ffEFIp 201 (415)
.++|+++ +.+|. . +.....+++.+| +++++ ..||.||+. +..+.. ... .++.. ....|+. -.+.++
T Consensus 383 l~sLr~i--~~gGe~l~~~~~~~~~~~~g~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~gs~-G~p~~g~-~v~i~d 457 (663)
T 1ry2_A 383 LKSLRCL--GSVGEPIAAEVWEWYSEKIGKNEIPIV-DTYWQTESGSHLVTPLAGGVTPMKPGSA-SFPFFGI-DAVVLD 457 (663)
T ss_dssp CTTCCEE--EECSSCCCHHHHHHHHHTTSCSSSCEE-ECBCCTTTCSCSEECCTTTCCCCCTTCC-CEECTTC-CEEEEC
T ss_pred cCceEEE--EEEcCCCCHHHHHHHHHHhCCCCceEE-EeECCccccCeeeccCCCCCcccCCCcc-ccCcCCC-eEEEEc
Confidence 4677733 33443 2 555677777776 38898 999999963 232221 011 11111 1223333 244554
Q ss_pred CCcccccccCCceeecCCccc-CceEEEEeccc-----ccee----------------eeeeCCEEEEeeecCCCcEEEE
Q 014974 202 FDMEKNEAVGEETVDFSGVEI-GKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEF 259 (415)
Q Consensus 202 ~~~~~~~~~~~~~l~l~ele~-G~~YelVvTt~-----~GLy----------------RYriGDvV~V~gf~~~~P~i~F 259 (415)
.++ ++. +.. |+.+||+|+.. .|.| .|++||++++.. .-.+.|
T Consensus 458 ~~~-------g~~-----v~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~----dG~l~i 521 (663)
T 1ry2_A 458 PNT-------GEE-----LNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDK----DGYIWI 521 (663)
T ss_dssp SSS-------TTC-----EECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECT----TCCEEE
T ss_pred CCC-------CCc-----CCCCCcceEEEEecCCCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEcC----CCCEEE
Confidence 322 333 335 89999999873 2332 399999999863 235899
Q ss_pred EeeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCC-CCceEEEEEEeecCccccCC-CH---HHH
Q 014974 260 VMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLES-SPKKLMIFVEIREGCTKLRD-SV---AIL 331 (415)
Q Consensus 260 ~gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~-~~~~Y~l~vE~~~~~~~~~~-~~---~~l 331 (415)
+||.++ +.|+++...+|++++.+. . .+.+..++.-... ....-+.|+.+..+...... +. +..
T Consensus 522 ~GR~dd~Ik~~G~rI~~~eIE~~l~~~-------p--~V~ea~Vvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~~~~l~ 592 (663)
T 1ry2_A 522 LGRVDDVVNVSGHRLSTAEIEAAIIED-------P--IVAECAVVGFNDDLTGQAVAAFVVLKNKSSWSTATDDELQDIK 592 (663)
T ss_dssp CSCTTSCBCSSSCCBCHHHHHHHHHSS-------T--TEEEEEEECCCCCTTSCCCEEEEEEC------------CCSHH
T ss_pred EeecCCEEEECCEEcCHHHHHHHHHhC-------C--CcceEEEEEEecCCCCeEEEEEEEEcCCCccccccchhHHHHH
Confidence 999998 899999999999998632 1 2445555432111 11123456665432000000 00 112
Q ss_pred HHHHHHHHHHhChhHHHhhhcCCCCCeEEEEcCC---ChHHHHHHHHHhcCCCCC--CCCCCcccCCHHHHHHHhc
Q 014974 332 RRCCSSLEDAFGSIYKVQRDRGEISPLSVSIVKP---GTFDRLLQVAIEKGAPAS--QYKPPKIVRNREIVEFMEG 402 (415)
Q Consensus 332 ~~~~~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~---Gtf~~~~~~~~~~G~~~~--Q~K~Pr~~~~~~~~~~L~~ 402 (415)
+++.+.+.+.| .....|-+|.+|+. ..=-+.++..+.+=.... +++.+..+.|++.++.+.+
T Consensus 593 ~~l~~~l~~~L---------~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~l~~p~~~~~~~~ 659 (663)
T 1ry2_A 593 KHLVFTVRKDI---------GPFAAPKLIILVDDLPKTRSGKIMRRILRKILAGESDQLGDVSTLSNPGIVRHLID 659 (663)
T ss_dssp HHHHHHHHHHT---------CTTTSCSEEEECSCCCBCTTSCBCHHHHHHSCC-------------CCHHHHHHHH
T ss_pred HHHHHHHHHhC---------CCCcCCeEEEEcCCCCCCCccCchHHHHHHHHcCCCCCCCCcccccCHHHHHHHHH
Confidence 23333333333 12345666776542 111122333333322222 6788888999999988866
No 26
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=98.19 E-value=4.5e-06 Score=82.82 Aligned_cols=134 Identities=13% Similarity=0.119 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCCCC
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQT 185 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~~~ 185 (415)
|.....|.+.... ..-.++|+.| +.+|. + .....++++. +++++ .+||.||+...+...+...+..
T Consensus 131 P~~l~~ll~~~~~-------~~~l~~lr~v--~~gG~~l~~~~~~~~~~~--~~~~~-~~YG~TEt~~~~~~~~~~~~~~ 198 (358)
T 4gs5_A 131 PMQLQSILENSAT-------SGQVDRLGKV--LLGGAPVNHALAMQISDL--AMPVY-QSYGMTETVSHVALKALNGPEA 198 (358)
T ss_dssp HHHHHHHHHCTTT-------GGGGGGGCSE--EECSSCCCHHHHHHHHTC--SSCEE-EEEECGGGSSEEEEEECSSTTC
T ss_pred hHHHHHhhccccc-------cccCCcceEE--EEcccCCCchheeccccc--CceEE-eccccccccceeeccccccccc
Confidence 6666555443321 1223567733 33443 2 4444556543 48888 9999999643332221111100
Q ss_pred -ceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---cceeeeeeCCEEEEeeecCCCcEEEEEe
Q 014974 186 -TRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYRYRLGDIVKVVDFYNSSPQVEFVM 261 (415)
Q Consensus 186 -~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLyRYriGDvV~V~gf~~~~P~i~F~g 261 (415)
..+ ++ .+-.++..+++.|+++... .| -||+||++++.. . .+.|+|
T Consensus 199 g~~~-----------~~-------------~pgv~~~~~~~Gel~~~g~~~~~g--~~~TGDlg~~d~---~--g~~~~G 247 (358)
T 4gs5_A 199 SELY-----------VF-------------LPGIQYGVDERGCLHISGAVTNGQ--TVQTNDLVEIHG---N--AFQWIG 247 (358)
T ss_dssp CSCE-----------EE-------------CTTCEEEECTTSEEEEESGGGTTC--CEEEEEEEEECS---S--EEEEEE
T ss_pred ceee-----------cc-------------CCCeEEEecCcCceEEecccccCc--ceecCCcccccc---C--ceEEcc
Confidence 011 11 1112344566778887643 33 478999999865 2 288999
Q ss_pred eCCC---cceeecCHHHHHHHHHHHH
Q 014974 262 RAPK---SSFEIISERDLMSAMESFQ 284 (415)
Q Consensus 262 R~~~---l~gEkl~e~~v~~av~~a~ 284 (415)
|.++ +.|+|++..+|++++....
T Consensus 248 R~dd~Ik~~G~~v~p~eIE~~l~~~~ 273 (358)
T 4gs5_A 248 RADNVINSGGVKIVLDQIDQRIAAVF 273 (358)
T ss_dssp EGGGEEEETTEEEEHHHHHHHHHHHH
T ss_pred cccCeEEECCEEECHHHHHHHHHHhc
Confidence 9998 8999999999999887653
No 27
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=98.14 E-value=5.3e-06 Score=87.92 Aligned_cols=149 Identities=13% Similarity=0.164 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCC--
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP-- 183 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~-- 183 (415)
|.....|.+...... .+.-.++|++| +.+|. . .....++++.+| ++++ ..||.||+.+..........
T Consensus 282 P~~~~~l~~~~~~~~----~~~~l~~lr~i--~~gGe~l~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~ 353 (617)
T 3rg2_A 282 PPAVSLWLQALIEGE----SRAQLASLKLL--QVGGARLSATLAARIPAEIG-CQLQ-QVFGMAEGLVNYTRLDDSAEKI 353 (617)
T ss_dssp HHHHHHHHHHHHTTC----CTTTTTTCCEE--EEESSCCCHHHHHHHHHHTC-SEEE-EEEEETTEEEEECCTTSCHHHH
T ss_pred hHHHHHHHHhhhccc----ccccCCCccEE--EEcCCcCCHHHHHHHHHHhC-CcEE-EEeccCcceeecccCCCccccc
Confidence 666666655543321 22235788843 34443 2 556677777775 8888 99999998765422111100
Q ss_pred -CCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---cceee--------------eeeCCEE
Q 014974 184 -QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR--------------YRLGDIV 245 (415)
Q Consensus 184 -~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLyR--------------YriGDvV 245 (415)
......+.++. -...++.+ ++. +..|+.+||+|+.. .|.|. |||||++
T Consensus 354 ~~~~G~p~~~~~-~~~i~d~~--------~~~-----~p~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~ 419 (617)
T 3rg2_A 354 IHTQGYPMCPDD-EVWVADAE--------GNP-----LPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLI 419 (617)
T ss_dssp HHCCCEESCTTC-EEEEECTT--------SCB-----CCTTCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEEE
T ss_pred ccCCCccCCCCc-eEEEECCC--------CCC-----CCCCCceEEEecCccccchhcCChhhhhhccCCCCceecCceE
Confidence 00112222332 23344422 333 55899999999864 33322 9999999
Q ss_pred EEeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHH
Q 014974 246 KVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 246 ~V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~ 282 (415)
++.. .-.+.|+||.++ ++|+++...+|++++.+
T Consensus 420 ~~~~----dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~ 455 (617)
T 3rg2_A 420 SIDP----EGYITVQGREKDQINRGGEKIAAEEIENLLLR 455 (617)
T ss_dssp EECT----TSCEEEEEECSSEEEETTEEEEHHHHHHHHTT
T ss_pred EEcC----CceEEEEeecCCEEEECCEEeCHHHHHHHHHh
Confidence 9853 347999999998 99999999999998875
No 28
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=98.12 E-value=2.8e-06 Score=88.62 Aligned_cols=148 Identities=11% Similarity=0.087 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEeeCCCCCCC--
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP-- 183 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi~~~~~~~~-- 183 (415)
|.....|.+..... ..-.++|+.| +.+|. + .....++++.+| ++++ ..||.||+.+..........
T Consensus 289 P~~~~~l~~~~~~~------~~~~~~lr~i--~~gG~~l~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~~~~~~~~ 358 (544)
T 3o83_A 289 PSAVIMWLEKAAQY------KDQIQSLKLL--QVGGASFPESLARQVPEVLN-CKLQ-QVFGMAEGLVNYTRLDDSDEQI 358 (544)
T ss_dssp HHHHHHHHHHHTTT------HHHHTTCCEE--EEESSCCCHHHHTHHHHHHC-SEEE-EEEECTTSCEEECCTTSCHHHH
T ss_pred hHHHHHHHhchhhc------cccCCcceEE--EEcCCCCCHHHHHHHHHHhC-CcEE-eeeccccccceeecCCCchhhc
Confidence 66666666555321 2224677833 34443 2 566677877775 8888 99999998654422111100
Q ss_pred -CCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---ccee--------------eeeeCCEE
Q 014974 184 -QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIV 245 (415)
Q Consensus 184 -~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy--------------RYriGDvV 245 (415)
......+.++. -++.++.+ ++. +..|+.+||+|+.. .|.| .|||||++
T Consensus 359 ~~~~G~p~~~~~-~~~i~d~~--------~~~-----~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg 424 (544)
T 3o83_A 359 FTTQGRPISSDD-EIKIVDEQ--------YRE-----VPEGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDLV 424 (544)
T ss_dssp HHCCCEESCTTC-EEEEECTT--------SCB-----CCTTCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEEE
T ss_pred cCCCceecCCCc-EEEEECCC--------CCC-----CCCCCeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCEE
Confidence 00112222332 34555522 222 56899999999874 2332 29999999
Q ss_pred EEeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHHH
Q 014974 246 KVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 283 (415)
Q Consensus 246 ~V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~a 283 (415)
++.. .-.+.|+||.++ +.|++++..+|++++.+.
T Consensus 425 ~~~~----dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~ 461 (544)
T 3o83_A 425 QRTP----DGNLRVVGRIKDQINRGGEKIASEEIEKLILLH 461 (544)
T ss_dssp EECT----TSCEEEEEEEC----------------------
T ss_pred EEcC----CCCEEEEeecCCEEEeCCEEECHHHHHHHHHhC
Confidence 9853 357899999998 899999999999998864
No 29
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=98.10 E-value=3.2e-05 Score=80.11 Aligned_cols=127 Identities=20% Similarity=0.179 Sum_probs=78.3
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEE--EeeCCC--CCCCCCceeeecCCceEEEeeeCCc
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDI--AQPPQTTRFVMLPTAAYFEFLPFDM 204 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~i--gi~~~~--~~~~~~~~~~l~~~~~ffEFIp~~~ 204 (415)
.|+|++ ++.+|. + ....+++++. +++++ .+||.||+.. ++.... ....+. .....++. -.+.++.+
T Consensus 283 ~~~lr~--i~~gGe~l~~~~~~~~~~~--~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~-~G~~~~~~-~~~i~d~~- 354 (517)
T 3r44_A 283 APDFRY--FITGGAPMPEALIKIYAAK--NIEVV-QGYALTESCGGGTLLLSEDALRKAGS-AGRATMFT-DVAVRGDD- 354 (517)
T ss_dssp CTTCCE--EEECSSCCCHHHHHHHHHT--TCEEE-EEEECGGGTTCEEEECGGGTTTTTTC-CBEECTTE-EEEEECTT-
T ss_pred CCcccE--EEECCCCCCHHHHHHHHhc--CCcEE-EeecccccccceeecCCccccccCCC-CCcCCCCe-EEEEECCC-
Confidence 467773 334443 2 4444555554 58888 9999999632 222111 111111 11222322 23333321
Q ss_pred ccccccCCceeecCCcccCceEEEEeccc---cceee-------------eeeCCEEEEeeecCCCcEEEEEeeCCC---
Q 014974 205 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK--- 265 (415)
Q Consensus 205 ~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLyR-------------YriGDvV~V~gf~~~~P~i~F~gR~~~--- 265 (415)
+.. +..| .+||+|+.. .|.|. |||||++++.. .-.+.|+||.++
T Consensus 355 -------~~~-----~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f~~g~~~TGDl~~~~~----dG~l~~~GR~dd~ik 417 (517)
T 3r44_A 355 -------GVI-----REHG-EGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDD----EGYLYIKDRLKDMII 417 (517)
T ss_dssp -------SCE-----ESSE-EEEEEEEETTSCSEETTCHHHHHHTEETTEEEEEEEEEECT----TSCEEEEECGGGCEE
T ss_pred -------CCC-----CCCC-CeEEEEeCcchhhhhCCChhhhHhhhcCCCEecceeEEEcC----CeeEEEecCCcCEEE
Confidence 333 3466 799999874 45443 99999999853 347899999998
Q ss_pred cceeecCHHHHHHHHHH
Q 014974 266 SSFEIISERDLMSAMES 282 (415)
Q Consensus 266 l~gEkl~e~~v~~av~~ 282 (415)
++|++++..+|++++.+
T Consensus 418 ~~G~~v~p~eIE~~l~~ 434 (517)
T 3r44_A 418 SGGENVYPAEIESVIIG 434 (517)
T ss_dssp ETTEEECHHHHHHHHTT
T ss_pred ECCEEECHHHHHHHHHh
Confidence 99999999999998874
No 30
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=98.04 E-value=7.6e-06 Score=85.42 Aligned_cols=131 Identities=19% Similarity=0.223 Sum_probs=64.6
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEEe---eCCCCCCCCCceeeecCCceEEEeeeCCcc
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGI---NLDIAQPPQTTRFVMLPTAAYFEFLPFDME 205 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~igi---~~~~~~~~~~~~~~l~~~~~ffEFIp~~~~ 205 (415)
.++|+++ +.+|. + ....+++++.+ +++++ .+||.||+.+.. +..+..... ......++. -...++.+.
T Consensus 293 ~~~lr~~--~~gG~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~-~~G~p~~~~-~~~i~d~~~- 365 (562)
T 3ite_A 293 APHLVYL--GVGGEKMTPRTQQIWSSSD-RVALV-NVYGPTEVTIGCSAGRILPDSDTR-CIGHPLGDS-VAHVLAPGS- 365 (562)
T ss_dssp STTCCEE--EEESSCCCHHHHHHHTTCS-SCEEE-EEECCGGGCSCSEEEECCTTSCTT-EEEEECTTC-EEEEECTTS-
T ss_pred cCceEEE--EEecCCCCHHHHHHHhhCC-CcEEE-EeeccchheeeeeeeeecCCCCCc-cccccCCCC-eEEEEeCCC-
Confidence 4677733 33443 2 34445555544 48888 999999964321 122222111 122233333 244554332
Q ss_pred cccccCCceeecCCcccCceEEEEeccc---ccee---------------eeeeCCEEEEeeecCCCcEEEEEeeCCC--
Q 014974 206 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 265 (415)
Q Consensus 206 ~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy---------------RYriGDvV~V~gf~~~~P~i~F~gR~~~-- 265 (415)
++ .+..|+.+||+|... .|.| .|++||++++.. .-.+.|+||.++
T Consensus 366 ------~~-----~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDlg~~d~----dG~l~~~GR~dd~I 430 (562)
T 3ite_A 366 ------NE-----HVKKGMAGELVIEGSLVANGYLNRPDAKGFCDINGRKMYRTGDIVRMDA----DSSILFLGRKDEQV 430 (562)
T ss_dssp ------SC-----BCCTTSCEEEEEESTTSCCEESSCTTCCSEEEETTEEEEEEEEEEEECT----TSCEEEEEEC----
T ss_pred ------CC-----CCCCCCceEEEEeccccchhhCCCccccccccCCCCEEEecCCEEEEcC----CCeEEEEccccCEE
Confidence 22 256899999999764 3433 499999999853 357899999998
Q ss_pred -cceeecCHHHHHHHHHHH
Q 014974 266 -SSFEIISERDLMSAMESF 283 (415)
Q Consensus 266 -l~gEkl~e~~v~~av~~a 283 (415)
+.|++++..+|++++.+.
T Consensus 431 k~~G~~v~p~eIE~~l~~~ 449 (562)
T 3ite_A 431 KVRGQRLELGEVSEVIRSL 449 (562)
T ss_dssp -------------------
T ss_pred eECcEEECHHHHHHHHHhc
Confidence 899999999999998765
No 31
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=98.03 E-value=1.8e-05 Score=83.01 Aligned_cols=146 Identities=18% Similarity=0.140 Sum_probs=73.1
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEE--Eee-CCCCCC
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV--GIN-LDIAQP 182 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~i--gi~-~~~~~~ 182 (415)
|.....|.+... +-.++|++ ++.+|. + .....++++.+++++++ .+||.||+.. ... ......
T Consensus 311 P~~~~~l~~~~~---------~~~~~lr~--~~~gG~~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~ 378 (570)
T 4gr5_A 311 ASLFNFLVDEVP---------EAFEGVRY--AITGGEPASVPHVAKARRDHPALRLG-NGYGPAESMGFTTHHAVVAGDL 378 (570)
T ss_dssp HHHHHHHHHHCG---------GGGTTCSE--EEEESSCCCHHHHHHHHHHCTTCEEE-EEECCGGGCSCSEEEECCGGGT
T ss_pred HHHHHHHHhhch---------hhCCCceE--EEEecccCCHHHHHHHHHhCCCcEEE-Eeechhhheeeeeeeeeccccc
Confidence 666666654332 12467883 344443 2 45667777888889998 9999999632 221 111100
Q ss_pred CCC--ceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---ccee--------------------
Q 014974 183 PQT--TRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------------- 237 (415)
Q Consensus 183 ~~~--~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy-------------------- 237 (415)
... ......|+. -...++.+ ++ ++..|+.+||+|+.. .|.|
T Consensus 379 ~~~~~~iG~p~~~~-~v~i~d~~--------~~-----~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~ 444 (570)
T 4gr5_A 379 SGTALPIGVPLAGK-RAYVLDDD--------LK-----PAANGALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGG 444 (570)
T ss_dssp TSSSCCCBEECTTE-EEEEECTT--------SC-----BCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSC
T ss_pred CCCccccceeeCCC-EEEEECCC--------CC-----CCCCCCcEEEEEeecccchhcCCCchhhhcccccCCCCCCCC
Confidence 000 112233433 23444422 22 356899999999763 3333
Q ss_pred --eeeeCCEEEEeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHHH
Q 014974 238 --RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 283 (415)
Q Consensus 238 --RYriGDvV~V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~a 283 (415)
-|||||++++.. .-.+.|+||.++ +.|++++..+|++++.+.
T Consensus 445 ~~w~~TGDlg~~d~----dG~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~~~ 491 (570)
T 4gr5_A 445 ERMYRTGDLARRRA----DGVLEYVGRADDQVKIRGFRVEPGEVEARLVGH 491 (570)
T ss_dssp CEEEEEEEEEEECT----TSCEEEEEC------------------------
T ss_pred CEEEeCCCeEEECC----CCeEEEEcccCCEEEECcEEeCHHHHHHHHhcC
Confidence 399999999853 346999999998 899999999999999864
No 32
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=98.01 E-value=1.5e-05 Score=88.91 Aligned_cols=133 Identities=11% Similarity=0.098 Sum_probs=71.3
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEE--EeeCC----CCCCCCCceeeecCCceEEEeeeC
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLD----IAQPPQTTRFVMLPTAAYFEFLPF 202 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~i--gi~~~----~~~~~~~~~~~l~~~~~ffEFIp~ 202 (415)
.++|++ ++.+|. . ....+++++.+++++++ .+||.||+.. +.... +............|+. -++.+++
T Consensus 343 l~~lr~--~~~gg~~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~-~~~i~d~ 418 (979)
T 3tsy_A 343 LSSIRV--VKSGAAPLGKELEDAVNAKFPNAKLG-QGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNA-EMKIVDP 418 (979)
T ss_dssp CTTCCE--EEESSCCCCSSHHHHHHHHCTTCEEE-ECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSC-EEEEECT
T ss_pred ccceEE--EEEcCCCCCHHHHHHHHHHCCCCeEE-eeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCc-EEEEEeC
Confidence 467773 333443 2 55667888888889999 9999999642 33211 1000000112234443 3566664
Q ss_pred CcccccccCCceeecCCcccCceEEEEeccc---cceee--------------eeeCCEEEEeeecCCCcEEEEEeeCCC
Q 014974 203 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK 265 (415)
Q Consensus 203 ~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLyR--------------YriGDvV~V~gf~~~~P~i~F~gR~~~ 265 (415)
++ ++. |..|+.+||+|+.. .|.|. |||||++++.. .-.+.|+||.++
T Consensus 419 ~~-------~~~-----~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~~----dG~l~~~GR~dd 482 (979)
T 3tsy_A 419 DT-------GDS-----LSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDD----DDELFIVDRLKE 482 (979)
T ss_dssp TS-------CCB-----CCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECT----TSCEEEEEESCC
T ss_pred CC-------CCC-----CCCCCccEEEEECCCccccccCChhhhhhhccCCCcEEcCCEEEEcC----CceEEEecCCCC
Confidence 43 233 45899999999853 33332 99999999853 346899999998
Q ss_pred ---cceeecCHHHHHHHHHHH
Q 014974 266 ---SSFEIISERDLMSAMESF 283 (415)
Q Consensus 266 ---l~gEkl~e~~v~~av~~a 283 (415)
+.|++++..+|++++.+.
T Consensus 483 ~ik~~G~~v~~~eIE~~l~~~ 503 (979)
T 3tsy_A 483 LIKYKGFQVAPAELEALLIGH 503 (979)
T ss_dssp ---------------------
T ss_pred EEEECCEEECHHHHHHHHHhC
Confidence 999999999999998764
No 33
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=98.00 E-value=1.5e-05 Score=84.99 Aligned_cols=132 Identities=13% Similarity=0.106 Sum_probs=82.7
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEE--e-eCCCCCCC--CCceeeecCCceEEEeeeCC
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVG--I-NLDIAQPP--QTTRFVMLPTAAYFEFLPFD 203 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~ig--i-~~~~~~~~--~~~~~~l~~~~~ffEFIp~~ 203 (415)
.++|++| +.+|. + .....++.+.+++++++ ..||.||+.+. . ...+.... ........|+. -...++.+
T Consensus 275 l~~lr~v--~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~i~d~~ 350 (620)
T 4dg8_A 275 LGGLRQL--LTGGDILSVPHVRRALLRHPRLHLV-NGYGPTENTTFTCCHVVTDDDLEEDDIPIGKAIAGT-AVLLLDEH 350 (620)
T ss_dssp GTTCSEE--EEESSCCCHHHHHHHHHHCTTCEEE-EEECCGGGCSCSEEEECCTGGGGSSSCCCBEECTTE-EEEEECTT
T ss_pred CCCccEE--EEEeCcCCHHHHHHHHHhCCCeEEE-eeEchhhhhhheEEEeccccccCCCCCCceecccCc-EEEEECcc
Confidence 4678833 44443 2 35556666667779999 99999996432 1 11111000 00112233333 24455432
Q ss_pred cccccccCCceeecCCcccCceEEEEeccc---cce---------------------eeeeeCCEEEEeeecCCCcEEEE
Q 014974 204 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGF---------------------YRYRLGDIVKVVDFYNSSPQVEF 259 (415)
Q Consensus 204 ~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GL---------------------yRYriGDvV~V~gf~~~~P~i~F 259 (415)
+..+ +..|+.+||+|... .|. -.|||||+++... .-.+.|
T Consensus 351 --------~~~~----~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l~~ 414 (620)
T 4dg8_A 351 --------GQEI----AEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDE----QGRLRF 414 (620)
T ss_dssp --------SCBC----CSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECT----TSCEEE
T ss_pred --------CCCC----CCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEECC----CCeEEE
Confidence 2221 45899999999643 222 2399999998853 347999
Q ss_pred EeeCCC---cceeecCHHHHHHHHHH
Q 014974 260 VMRAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 260 ~gR~~~---l~gEkl~e~~v~~av~~ 282 (415)
+||.++ ++|+++...+|++++.+
T Consensus 415 ~GR~dd~Ik~~G~ri~~~eIE~~l~~ 440 (620)
T 4dg8_A 415 IGRGDGQVKLNGYRLDLPALEQRFRR 440 (620)
T ss_dssp EECSSSEEEETTEEEEHHHHHHHHHT
T ss_pred EccCCCEEEECCEEcCHHHHHHHHHh
Confidence 999998 99999999999999875
No 34
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=97.97 E-value=6.3e-05 Score=78.90 Aligned_cols=128 Identities=13% Similarity=0.167 Sum_probs=77.6
Q ss_pred CCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEE--Eee-CCCCCCCC-CceeeecCCceEEEeeeCCc
Q 014974 131 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV--GIN-LDIAQPPQ-TTRFVMLPTAAYFEFLPFDM 204 (415)
Q Consensus 131 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~i--gi~-~~~~~~~~-~~~~~l~~~~~ffEFIp~~~ 204 (415)
.++++. ++.+|. + +..++++ ...++++ .+||.||+.+ ... ........ .......|+. -...++.+
T Consensus 292 ~~~lr~--~~~gG~~l~~~~~~~~---~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~d~~- 363 (563)
T 1amu_A 292 ILSIQT--LITAGSATSPSLVNKW---KEKVTYI-NAYGPTETTICATTWVATKETIGHSVPIGAPIQNT-QIYIVDEN- 363 (563)
T ss_dssp CCSCSE--EEEESSCCCHHHHHHH---TTTSEEE-EEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTE-EEEEECTT-
T ss_pred cccccE--EEEEEecCCHHHHHHH---HhCCeEE-EEECcCHHhHhheeeecccccCCCCCcccceeCCC-EEEEECCC-
Confidence 357773 334443 2 3333333 3347788 9999999632 221 11111000 0112233443 24445422
Q ss_pred ccccccCCceeecCCcccCceEEEEeccc---ccee--------------------eeeeCCEEEEeeecCCCcEEEEEe
Q 014974 205 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------------RYRLGDIVKVVDFYNSSPQVEFVM 261 (415)
Q Consensus 205 ~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy--------------------RYriGDvV~V~gf~~~~P~i~F~g 261 (415)
++. +..|+.+||+|+.. .|.| .|++||++++.. .-.+.|+|
T Consensus 364 -------~~~-----~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~----dG~l~i~G 427 (563)
T 1amu_A 364 -------LQL-----KSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLS----DGNIEYLG 427 (563)
T ss_dssp -------SCB-----CCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECT----TSCEEEEE
T ss_pred -------cCC-----CCCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEcC----CCeEEEec
Confidence 233 55899999999874 2322 699999998853 23699999
Q ss_pred eCCC---cceeecCHHHHHHHHHH
Q 014974 262 RAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 262 R~~~---l~gEkl~e~~v~~av~~ 282 (415)
|.++ +.|++++..+|++++.+
T Consensus 428 R~~d~Ik~~G~~V~p~eIE~~l~~ 451 (563)
T 1amu_A 428 RIDNQVKIRGHRVELEEVESILLK 451 (563)
T ss_dssp EGGGEEEETTEEEEHHHHHHHHTT
T ss_pred cccCEEEECCEEeCHHHHHHHHHh
Confidence 9998 88999999999998874
No 35
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=97.92 E-value=2.8e-05 Score=76.76 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=66.3
Q ss_pred CCCceEEEEecCC-h-HHHHHHHH-HhhCCCCccccccccCceE-EEeeCCCCCCCCCceeee----cCCceEEEeeeCC
Q 014974 132 PNVRYIKCVTTGS-M-SQYCSKIK-YYAGEVPVLGGDYFASECY-VGINLDIAQPPQTTRFVM----LPTAAYFEFLPFD 203 (415)
Q Consensus 132 P~L~~i~~~~~G~-~-~~y~~~l~-~~~g~v~~~~~~y~aSEg~-igi~~~~~~~~~~~~~~l----~~~~~ffEFIp~~ 203 (415)
++++. ++.+|. + +..+++++ +.+|+++++ ..||.||+. ++... +..+. +..+. .|+ ..++.++++
T Consensus 231 ~~lr~--i~~gGe~l~~~~~~~~~~~~~p~~~v~-~~YG~TE~~~~~~~~-~~~~~--G~~~~~~~~~~~-~~v~ivD~~ 303 (369)
T 3hgu_A 231 QSLAQ--ITLGGTELNLDEIKFIASEILPDCEFS-ASYGSTSALGVSRSL-LITSE--SQQVIYDSFSPF-ITYDVVDSI 303 (369)
T ss_dssp HHCSE--EEEESSCCCHHHHHHHHHHTCTTSEEE-EEEEEGGGTEEEEEC-CBCTT--CSSCEEECCTTT-EEEEEECTT
T ss_pred CCeeE--EEECCccCCHHHHHHHHHHhCCCcEEE-cccCchhhhcceecc-ccccC--CCcccccCCCCC-eEEEEECCC
Confidence 46773 344443 2 67778898 889889999 899999963 33211 11111 22111 344 467777654
Q ss_pred cccccccCCceeecCCcccCceEEEEecccc---ceeeeeeCCEEEEeeecC
Q 014974 204 MEKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GFYRYRLGDIVKVVDFYN 252 (415)
Q Consensus 204 ~~~~~~~~~~~l~l~ele~G~~YelVvTt~~---GLyRYriGDvV~V~gf~~ 252 (415)
+ +++ |..|+.+||+||+.. .|.||++||+.+.....+
T Consensus 304 ~-------g~~-----vp~G~~GEl~vt~l~~~~~l~ry~tgD~~~~~~~~~ 343 (369)
T 3hgu_A 304 T-------AQT-----VEYGERGNVIVTHLSPWAFYPRVAERDTAIRLPGVS 343 (369)
T ss_dssp T-------CSB-----CCTTCEEEEEEEEEETTEEEEEEEEEEEEEEECCST
T ss_pred C-------CcC-----CCCCCceEEEEEEcCcccccccccCCceEEEecCCC
Confidence 3 334 459999999999863 399999999998776544
No 36
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.89 E-value=0.00015 Score=74.42 Aligned_cols=137 Identities=12% Similarity=0.103 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEE-EeeCCCC---C
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIA---Q 181 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~i-gi~~~~~---~ 181 (415)
|.....|.+...... . +|+. .+.+|. + ....+++++ + +++++ ..||.||... .....+. .
T Consensus 259 P~~~~~l~~~~~~~~-------~--~lr~--i~~gG~~l~~~~~~~~~~-~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~ 324 (501)
T 3ipl_A 259 PQTLNWLMQQGLHEP-------Y--NLQK--ILLGGAKLSATMIETALQ-Y-NLPIY-NSFGMTETCSQFLTATPEMLHA 324 (501)
T ss_dssp HHHHHHHHHHTCCSC-------T--TCCE--EEECSSCCCHHHHHHHHH-T-TCCEE-EEEEEGGGTEEEEEECHHHHHH
T ss_pred HHHHHHHHhcCCCCc-------C--cccE--EEEeCCCCCHHHHHHHHH-h-CCCEe-ccccccccccceeecCcccccc
Confidence 666666655543211 1 6773 334443 2 444556655 3 58888 9999999532 2211110 0
Q ss_pred CCCCceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---cceee------------eeeCCEEE
Q 014974 182 PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR------------YRLGDIVK 246 (415)
Q Consensus 182 ~~~~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLyR------------YriGDvV~ 246 (415)
.+. ......|+. -.+.++ -..|+.+||+|+.. .|.|. |++||+++
T Consensus 325 ~~~-~~G~p~~~~-~~~i~d------------------~~~~~~GEl~v~g~~~~~gY~~~~~~t~~~~~g~~~TGDl~~ 384 (501)
T 3ipl_A 325 RPD-TVGMPSANV-DVKIKN------------------PNKEGHGELMIKGANVMNGYLYPTDLTGTFENGYFNTGDIAE 384 (501)
T ss_dssp CTT-CCBEECTTC-EEEEES------------------CCSSCCEEEEEESTTSCSCCSBSTTCCCSEETTEEEEEEEEE
T ss_pred CCC-CCCCCCCCc-EEEEec------------------CCCCCccEEEEeccchhhhhCcChhhcchhcCCceecCCEEE
Confidence 000 011112222 122222 12577899999764 34333 99999998
Q ss_pred EeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHH
Q 014974 247 VVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 247 V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~ 282 (415)
+.. .-.+.|+||.++ +.|++++..+|++++.+
T Consensus 385 ~~~----~G~l~~~GR~dd~ik~~G~~v~p~eiE~~l~~ 419 (501)
T 3ipl_A 385 IDH----EGYVMIYDRRKDLIISGGENIYPYQIETVAKQ 419 (501)
T ss_dssp ECT----TSCEEEEEECCCCEECSSCEECHHHHHHHHTT
T ss_pred EcC----CCeEEEEccccceEEECCEEECHHHHHHHHHh
Confidence 853 457999999998 99999999999988864
No 37
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=97.62 E-value=0.00013 Score=76.00 Aligned_cols=149 Identities=20% Similarity=0.177 Sum_probs=82.9
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEE-EeeCCCCC---
Q 014974 108 PDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQ--- 181 (415)
Q Consensus 108 p~~A~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~i-gi~~~~~~--- 181 (415)
|.....|.+.....+ .-.++|+. ++.+|. + ...+.++ +.+| ++++ .+||.||+.. .....+..
T Consensus 275 P~~~~~l~~~~~~~~------~~l~~lr~--i~~gG~~l~~~~~~~~-~~~g-~~~~-~~YG~TE~~~~~~~~~~~~~~~ 343 (541)
T 1v25_A 275 PTVWLALADYLESTG------HRLKTLRR--LVVGGSAAPRSLIARF-ERMG-VEVR-QGYGLTETSPVVVQNFVKSHLE 343 (541)
T ss_dssp HHHHHHHHHHHHHHT------CCCSSCCE--EEECSSCCCHHHHHHH-HHTT-CEEE-EEEECGGGSSEEEECCCCGGGT
T ss_pred hHHHHHHHhhhhccC------CcchhccE--EEECCCCCCHHHHHHH-HHhC-Ccee-ecccccccccceeccccccccc
Confidence 555555555433211 11357773 333443 2 4555666 4454 8888 9999999632 22111110
Q ss_pred --CCC------CceeeecCCceEEEeeeCCcccccccCCceeecCCcccCceEEEEeccc---ccee-------------
Q 014974 182 --PPQ------TTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY------------- 237 (415)
Q Consensus 182 --~~~------~~~~~l~~~~~ffEFIp~~~~~~~~~~~~~l~l~ele~G~~YelVvTt~---~GLy------------- 237 (415)
++. .......|+. -.+.++.+ ++.++ ...|+.+||+|+.. .|.|
T Consensus 344 ~~~~~~~~~~~~~~G~p~~~~-~~~i~d~~--------g~~~~---~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~ 411 (541)
T 1v25_A 344 SLSEEEKLTLKAKTGLPIPLV-RLRVADEE--------GRPVP---KDGKALGEVQLKGPWITGGYYGNEEATRSALTPD 411 (541)
T ss_dssp TSCHHHHHHHHTSCBEECTTC-EEEEECTT--------SCBCC---SSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTT
T ss_pred ccCccccccccCCCCCcCCCc-EEEEECCC--------CCCCC---CCCCcceEEEEeCcchhccccCChhhhhhhccCC
Confidence 000 0011223333 24455432 22222 01236899999864 3433
Q ss_pred -eeeeCCEEEEeeecCCCcEEEEEeeCCC---cceeecCHHHHHHHHHHH
Q 014974 238 -RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 283 (415)
Q Consensus 238 -RYriGDvV~V~gf~~~~P~i~F~gR~~~---l~gEkl~e~~v~~av~~a 283 (415)
-|||||++++.. .-.+.|+||.++ +.|++++..+|++++.+.
T Consensus 412 g~~~TGDlg~~d~----dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~ 457 (541)
T 1v25_A 412 GFFRTGDIAVWDE----EGYVEIKDRLKDLIKSGGEWISSVDLENALMGH 457 (541)
T ss_dssp SCEEEEEEEEECT----TCCEEEEEESSCEEEETTEEEEHHHHHCC----
T ss_pred CCeEcCCEEEEcC----CceEEEeecccceeeeCCEEECHHHHHHHHHhC
Confidence 299999998863 246899999998 899999999999999864
No 38
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.51 E-value=0.00017 Score=83.01 Aligned_cols=130 Identities=15% Similarity=0.117 Sum_probs=82.8
Q ss_pred CCCceEEEEecCC-h-HHHHHHHHHhhCCCCccccccccCceEEE--e-eCCCC--CCCCCceeeecCCceEEEeeeCCc
Q 014974 132 PNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVG--I-NLDIA--QPPQTTRFVMLPTAAYFEFLPFDM 204 (415)
Q Consensus 132 P~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~aSEg~ig--i-~~~~~--~~~~~~~~~l~~~~~ffEFIp~~~ 204 (415)
++|+. .+++|. . ...+.++.+.+|+++++ .+||.||+.+. . ..... ...........++... ..++.+
T Consensus 720 ~~lr~--~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~-~i~d~~- 794 (1304)
T 2vsq_A 720 KGLRC--ILFGGERASVPHVRKALRIMGPGKLI-NCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASV-YILNEQ- 794 (1304)
T ss_dssp HTCSE--EEEESSCCCHHHHHHHHHHHCTTCEE-EEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEE-EEECTT-
T ss_pred CCccE--EEEecCCCCHHHHHHHHHhCCCCEEE-EeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEE-EEECCC-
Confidence 56773 334453 2 45567777778888888 99999997542 2 11110 0000011223344432 233321
Q ss_pred ccccccCCceeecCCcccCceEEEEeccc---cc--------------------eeeeeeCCEEEEeeecCCCcEEEEEe
Q 014974 205 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RG--------------------FYRYRLGDIVKVVDFYNSSPQVEFVM 261 (415)
Q Consensus 205 ~~~~~~~~~~l~l~ele~G~~YelVvTt~---~G--------------------LyRYriGDvV~V~gf~~~~P~i~F~g 261 (415)
.++ +..|+.+||+|... .| --.|||||+++... .-.|+|+|
T Consensus 795 -------~~~-----~p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~----dG~l~~~G 858 (1304)
T 2vsq_A 795 -------SQL-----QPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLP----DGTIEYAG 858 (1304)
T ss_dssp -------SCB-----CCTTCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECT----TSCEEEEE
T ss_pred -------cCC-----CCCCCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEcC----CCeEEEEc
Confidence 233 45899999999753 22 12599999998864 34699999
Q ss_pred eCCC---cceeecCHHHHHHHHHH
Q 014974 262 RAPK---SSFEIISERDLMSAMES 282 (415)
Q Consensus 262 R~~~---l~gEkl~e~~v~~av~~ 282 (415)
|.++ ++|+++...+|+.++.+
T Consensus 859 R~d~qvki~G~rie~~eIE~~l~~ 882 (1304)
T 2vsq_A 859 RIDDQVKIRGHRIELEEIEKQLQE 882 (1304)
T ss_dssp EGGGEEEETTEEEEHHHHHHHHHH
T ss_pred CCCCEEEECCEeeCHHHHHHHHHh
Confidence 9998 99999999999999975
No 39
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=95.17 E-value=0.049 Score=44.04 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=55.0
Q ss_pred eCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHH
Q 014974 262 RAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSL 338 (415)
Q Consensus 262 R~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~~~~~~l 338 (415)
|.++ ++|.++++.+|++++.+. -++. ..+.+..+.......-.+++|.... ...+...++++++.+
T Consensus 2 rADDmIiv~G~nv~P~eIE~vl~~~-------p~v~-~~~vv~v~~~~~~~~~~~~V~~~~~---~~~~~~~~~~l~~~i 70 (109)
T 3lax_A 2 NADDMIILKGVNIFPIQIETILLQF-------KELG-SDYLITLETAESNDEMTVEVELSQL---FTDDYGRLQALTREI 70 (109)
T ss_dssp GGGSCEEETTEEECHHHHHHHHHTC-------TTEE-EEEEEEEEEETTEEEEEEEEEECTT---CCCCHHHHHHHHHHH
T ss_pred CcCEEEEECCEEECHHHHHHHHHhC-------CCcc-cceEEEEeccccceeEEEEEEEeec---cccccchhhhhHHHH
Confidence 6677 899999999999988743 2221 1344333322212344577877543 123455667777777
Q ss_pred HHHhChhHHHhhhcCCCCCeEEEEcCCChHH
Q 014974 339 EDAFGSIYKVQRDRGEISPLSVSIVKPGTFD 369 (415)
Q Consensus 339 d~~Ln~~Y~~~R~~g~l~p~~v~~v~~Gtf~ 369 (415)
.+.+ +..-.+ ++.|.+|++|+++
T Consensus 71 ~~~l-------~~~~gv-~~~v~~v~~~~lP 93 (109)
T 3lax_A 71 TRQL-------KDEILV-TPRVKLVPKGALP 93 (109)
T ss_dssp HHHH-------HHHHSS-CCEEEEECTTCSC
T ss_pred HHHH-------HHHhCC-ccceEEEcCCeec
Confidence 7777 221124 4589999999987
No 40
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=95.16 E-value=0.12 Score=51.95 Aligned_cols=41 Identities=12% Similarity=0.093 Sum_probs=26.5
Q ss_pred cCCCCceEEEEecCC-h-HHHHHHHHHhhC-----CCCccccccccCceEE
Q 014974 130 LWPNVRYIKCVTTGS-M-SQYCSKIKYYAG-----EVPVLGGDYFASECYV 173 (415)
Q Consensus 130 lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g-----~v~~~~~~y~aSEg~i 173 (415)
-.++|++ ++.+|. + ...++++++.++ ++.++ .+||.||+.+
T Consensus 309 ~l~~lr~--i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~ 356 (480)
T 3t5a_A 309 DLGNILT--ILSGSERVQAATIKRFADRFARFNLQERVIR-PSYWLAEATV 356 (480)
T ss_dssp CCTTCCE--EEECCTTCCHHHHHHHHHHSGGGTCCGGGEE-EEEEETTTTE
T ss_pred chhhhhe--eeecCCcCCHHHHHHHHHHHhhcCCChhhcc-ccccccccce
Confidence 3567873 334443 2 566677777774 35677 9999999744
No 41
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=94.68 E-value=0.078 Score=43.04 Aligned_cols=90 Identities=14% Similarity=0.176 Sum_probs=54.0
Q ss_pred eeCCC---cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHH
Q 014974 261 MRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSS 337 (415)
Q Consensus 261 gR~~~---l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~~~~~~ 337 (415)
||.++ +.|.++++.+|++++.+. + ++. ..|.+..+.....-.-++++|. .+. ...+....+++...
T Consensus 1 GR~~D~Iiv~G~nv~P~eIE~~l~~~-p------~v~-~~~~v~v~~~~~~e~l~~~ve~-~~~--~~~~~~~~~~l~~~ 69 (109)
T 3gxs_A 1 SNADDMIILKGVNIFPIQIETILLQF-K------ELG-SDYLITLETAESNDEMTVEVEL-SQL--FTDDYGRLQALTRE 69 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTC-T------TEE-EEEEEEEEEETTEEEEEEEEEE-CTT--CCCCHHHHHHHHHH
T ss_pred CCccCEEEECCEEECHHHHHHHHHhC-C------CcC-CcEEEEEEcCCCceEEEEEEEE-cCc--cccchhHHHHHHHH
Confidence 68887 899999999999999863 2 221 1454433221112345688988 321 00112344556666
Q ss_pred HHHHhChhHHHhhhcCCCCCeEEEEcCCChHH
Q 014974 338 LEDAFGSIYKVQRDRGEISPLSVSIVKPGTFD 369 (415)
Q Consensus 338 ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~Gtf~ 369 (415)
+.+.+ +..-.+.+ +|.+|++|++.
T Consensus 70 i~~~l-------~~~~~~~~-~v~~v~~~~lP 93 (109)
T 3gxs_A 70 ITRQL-------KDEILVTP-RVKLVPKGALP 93 (109)
T ss_dssp HHHHH-------HHHHSSCC-EEEEECTTCSC
T ss_pred HHHHH-------HHhhCCce-EEEEECCCCcc
Confidence 66666 32223444 99999999976
No 42
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=77.03 E-value=11 Score=28.57 Aligned_cols=49 Identities=10% Similarity=0.073 Sum_probs=39.3
Q ss_pred eecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEee
Q 014974 269 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIR 318 (415)
Q Consensus 269 Ekl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~ 318 (415)
.+-.|+.+++||.+|.+.|+...+.++.+..+..+. +.-.||.+-+..+
T Consensus 15 ~~S~edAi~nAi~~AskTl~ni~~~eV~e~~~~v~d-gkv~~yqv~lKV~ 63 (72)
T 3onr_A 15 PTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDS-AGKITYRIKLEVS 63 (72)
T ss_dssp SSCHHHHHHHHHHHHHHHCSCCCEEEEEEEEEEECT-TCCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcccCCeEEEEEEEEEEEeC-CcEEEEEEEEEEE
Confidence 466799999999999998877678888899887654 3468999777664
No 43
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=74.60 E-value=12 Score=27.98 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=38.2
Q ss_pred eecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEee
Q 014974 269 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIR 318 (415)
Q Consensus 269 Ekl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~ 318 (415)
.+-.|+.+++||.+|.+.|+...+.++.+..+..+. +.-.||.+-+..+
T Consensus 13 ~~S~edAi~nAi~~AskTl~ni~~~eV~e~~~~v~d-gkv~~yqv~lKV~ 61 (68)
T 2cc6_A 13 EESFTAAADDAIDRAEDTLDNVVWAEVVDQGVEIGA-VEERTYQTEVQVA 61 (68)
T ss_dssp SSCHHHHHHHHHHHHHHHCSCEEEEEEEEEEEECTT-SSSCEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcccCCeEEEEEEEEEEEeC-CcEEEEEEEEEEE
Confidence 466699999999999998877668888888877644 3458999777764
No 44
>2ux9_A Dodecin; flavoprotein; HET: FMN COA; 1.4A {Thermus thermophilus} SCOP: d.230.2.1 PDB: 2cz8_A* 2deg_A 2deh_A 2dev_A 2v21_A* 2v18_A* 2vyx_A* 2v19_A*
Probab=68.35 E-value=12 Score=27.99 Aligned_cols=49 Identities=20% Similarity=0.218 Sum_probs=37.6
Q ss_pred eecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEee
Q 014974 269 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIR 318 (415)
Q Consensus 269 Ekl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~ 318 (415)
.+-.|+.+++||.+|.+.|+...+.++.+..+..+. +.-.||.+-+..+
T Consensus 15 ~~S~edAi~nAi~~AskTl~ni~~~eV~e~~~~v~d-gkv~~yqv~lkV~ 63 (69)
T 2ux9_A 15 EEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGE-AGVKEYQVVLEVG 63 (69)
T ss_dssp SSCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcccCCeEEEEEEEEEEEeC-CcEEEEEEEEEEE
Confidence 456699999999999998877667888888876644 2357998777654
No 45
>2vxa_A Dodecin; flavoprotein, flavin, riboflavin, lumichrome, archaea; HET: RBF; 2.60A {Halorhodospira halophila}
Probab=68.09 E-value=12 Score=28.23 Aligned_cols=49 Identities=16% Similarity=0.110 Sum_probs=37.8
Q ss_pred eecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEee
Q 014974 269 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIR 318 (415)
Q Consensus 269 Ekl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~ 318 (415)
.+-.|+.+++||.+|.+.|+...+.++.+..+..+. +.-.||.+-+..+
T Consensus 16 ~~S~edAi~nAi~~AskTl~ni~~~eV~e~r~~v~d-gki~~yqV~lKV~ 64 (72)
T 2vxa_A 16 PNGIEEAVNNAIARAGETLRHLRWFEVVDTRGHIEG-GRVNHWQVTVKVG 64 (72)
T ss_dssp SSCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhhccCCeEEEEEEEEEEEeC-CcEEEEEEEEEEE
Confidence 456699999999999998877668888888876643 3357998777664
No 46
>2yiz_A Dodecin; flavoprotein, flavin binding protein, protein-engineering, P storage protein; HET: COA FMN GOL; 1.70A {Mycobacterium tuberculosis} PDB: 3oqt_A 2yj0_A*
Probab=54.03 E-value=22 Score=26.62 Aligned_cols=49 Identities=6% Similarity=0.037 Sum_probs=37.4
Q ss_pred eecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEee
Q 014974 269 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIR 318 (415)
Q Consensus 269 Ekl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~ 318 (415)
.+-.|+.+++||.+|.+.|+...+.++.+..+..+. +.-.||.+-+..+
T Consensus 15 ~~S~edAi~nAi~~AskTl~ni~~~eV~e~~~~v~d-gkv~~yqv~lkv~ 63 (69)
T 2yiz_A 15 PDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVD-GAVAHFQVTMKVG 63 (69)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcccCCeEEEEEEEEEEEeC-CcEEEEEEEEEEE
Confidence 455699999999999998877667888888876644 2357998777654
No 47
>2lc0_A Putative uncharacterized protein TB39.8; FHAA, kinase substrate, protein binding; NMR {Mycobacterium tuberculosis}
Probab=33.71 E-value=54 Score=27.44 Aligned_cols=85 Identities=13% Similarity=0.118 Sum_probs=43.3
Q ss_pred cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCcccc-CCCHHHHHHHHHHHHHHhCh
Q 014974 266 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKL-RDSVAILRRCCSSLEDAFGS 344 (415)
Q Consensus 266 l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~-~~~~~~l~~~~~~ld~~Ln~ 344 (415)
+.+-++-+.+|.+++++.+. . +... +..+..--|.+|+|.+-..+ .... .......++++..+.+
T Consensus 26 ~F~~~v~PvEIa~~L~RE~d---~--~~~~----~~~~r~~aPN~y~V~Ls~~D-~~~l~~~~~~l~~el~~~l~~---- 91 (132)
T 2lc0_A 26 IFGGSIVPQEVEALLRREAA---D--GIQS----LQGNRLLAPNEYIITLGVHD-FEKLGADPELKSTGFARDLAD---- 91 (132)
T ss_dssp HHTTSSCTHHHHHHHHHHHH---H--TCBC----CCTTCCBCCCEEEEEEEHHH-HHHHCSCSHHHHHHHHHHHHH----
T ss_pred hcCCCCchHHHHHHHHHHHH---h--CCeE----cCCCcEEcCceEEEEeCHHH-HHHHHhhhHHHHHHHHHHHHH----
Confidence 34566889999999999886 3 2111 11112223789986653211 0000 0112222333333333
Q ss_pred hHHHhhhcCCCCCeEEEEcCC
Q 014974 345 IYKVQRDRGEISPLSVSIVKP 365 (415)
Q Consensus 345 ~Y~~~R~~g~l~p~~v~~v~~ 365 (415)
|...+.-...||+.|++...
T Consensus 92 -~a~~qgy~~~G~v~V~f~~d 111 (132)
T 2lc0_A 92 -YIQEQGWQTYGDVVVRFEQS 111 (132)
T ss_dssp -HHHHHTCBCSSCCEEEEEEE
T ss_pred -HHHHCCCeecCCeEEEEEEC
Confidence 33333233789999999654
No 48
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=27.65 E-value=97 Score=30.39 Aligned_cols=69 Identities=7% Similarity=0.010 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHhcCCCCCCChHHHHHHHHHhhCCCCHHHHHHHHHHhcCCCCCCcccccC
Q 014974 60 AIGLIGAFSFFESK--------WEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLW 131 (415)
Q Consensus 60 ~~~l~~~~~~le~~--------w~~l~~dI~~Gt~~~~i~~~~~r~~l~~~lg~p~p~~A~~L~~~~~~~g~~g~~~~lW 131 (415)
|..+++++++..+. ++-+-+.+..+.+.. +..+.++..+.+.|..|+|..+-++...+ | ++..++
T Consensus 150 PlRiLRa~Rfaa~~gf~i~~~T~~~i~~~~~~~~l~~-~s~eRi~~El~kiL~~~~~~~~l~~l~~~---g---lL~~~l 222 (390)
T 1vfg_A 150 PVRILRALRFAGRLNFKLSRSTEKLLKQAVNLGLLKE-APRGRLINEIKLALREDRFLEILELYRKY---R---VLEEII 222 (390)
T ss_dssp TTHHHHHHHHHHHHTCEECHHHHHHHHHHHHTTGGGT-SCHHHHHHHHHHHHHCSSHHHHHHHHHHT---T---CHHHHS
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhhhhc-cCHHHHHHHHHHHHcCCCHHHHHHHHHHc---C---CHHHHh
Confidence 67788888876653 222222222344544 77788999999999888998776665555 3 788999
Q ss_pred CCCc
Q 014974 132 PNVR 135 (415)
Q Consensus 132 P~L~ 135 (415)
|.+.
T Consensus 223 Pe~~ 226 (390)
T 1vfg_A 223 EGFQ 226 (390)
T ss_dssp TTCC
T ss_pred Hhhh
Confidence 9986
No 49
>2ln7_A LPXTG-SITE transpeptidase family protein; sortase, sortase family D, enzyme, protein binding; NMR {Bacillus anthracis}
Probab=24.52 E-value=32 Score=29.10 Aligned_cols=28 Identities=18% Similarity=0.286 Sum_probs=20.9
Q ss_pred ecCCcccCceEEEEeccccceeeeeeCCEE
Q 014974 216 DFSGVEIGKMYEVVVTTYRGFYRYRLGDIV 245 (415)
Q Consensus 216 ~l~ele~G~~YelVvTt~~GLyRYriGDvV 245 (415)
.|++|+.|.. ++|++..+-|+|++-++.
T Consensus 72 ~L~~l~~GD~--i~v~~~~~~~~Y~V~~~~ 99 (147)
T 2ln7_A 72 DLGQLKEKDT--LVLEYDNKTYTYEIQKIW 99 (147)
T ss_dssp HHHHSSTTCE--EEEEETTEEEEEEEEEEE
T ss_pred hhhcccCCCE--EEEEECCcEEEEEEEeEE
Confidence 4667888985 567888889999875543
No 50
>3oei_C RELK (toxin RV3358); toxin-antitoxin systems, protein-protein complex, tuberculos structural genomics consortium, protein binding; HET: MLZ FLC; 2.15A {Mycobacterium tuberculosis} SCOP: d.298.1.0
Probab=23.89 E-value=23 Score=28.05 Aligned_cols=17 Identities=24% Similarity=0.526 Sum_probs=13.1
Q ss_pred EEEeccccceeeeeeCC
Q 014974 227 EVVVTTYRGFYRYRLGD 243 (415)
Q Consensus 227 elVvTt~~GLyRYriGD 243 (415)
|-+--+.+|+||+|+||
T Consensus 58 e~Lkg~l~g~~s~RI~~ 74 (96)
T 3oei_C 58 EPLQGELSGYWSRRIDD 74 (96)
T ss_dssp EECCGGGTTCEEEESSS
T ss_pred hhcCCCCCCcEEEECCC
Confidence 33334679999999999
No 51
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=23.57 E-value=1.7e+02 Score=21.55 Aligned_cols=26 Identities=15% Similarity=0.350 Sum_probs=17.5
Q ss_pred eeeeCCEEE--EeeecCCCcEEEEEeeC
Q 014974 238 RYRLGDIVK--VVDFYNSSPQVEFVMRA 263 (415)
Q Consensus 238 RYriGDvV~--V~gf~~~~P~i~F~gR~ 263 (415)
+|++||.|+ |.+.....-+|.+.-|.
T Consensus 45 ~~~~Gd~V~v~V~~vd~~~~~i~lsl~~ 72 (80)
T 2k52_A 45 NLNVGDEIIVQAIDVRPEKREIDFKYIP 72 (80)
T ss_dssp GCCTTCEEEEEEEEEETTTTEEEEEECS
T ss_pred eeCCCCEEEEEEEEEECCCCEEEEEEee
Confidence 699999985 55654444577766553
No 52
>3g5o_B Uncharacterized protein RV2866; heterotetramer, 1:1 ratio, structural genomics, PSI-2, prote structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=22.73 E-value=93 Score=24.28 Aligned_cols=23 Identities=13% Similarity=0.169 Sum_probs=15.2
Q ss_pred cccceeeeeeCCEEEEeeecCCC
Q 014974 232 TYRGFYRYRLGDIVKVVDFYNSS 254 (415)
Q Consensus 232 t~~GLyRYriGDvV~V~gf~~~~ 254 (415)
+..|+||+|+||---+--..+..
T Consensus 63 ~~~g~~r~Rig~yRiIY~i~~~~ 85 (102)
T 3g5o_B 63 ELAGTFSARRGTYRLLYRIDDEH 85 (102)
T ss_dssp GGTTCEEEECSSEEEEEEEETTT
T ss_pred CCceEEEEEeCCEEEEEEEeCCe
Confidence 46889999999854444443343
No 53
>3g66_A Sortase C; pilus, transferase; HET: MES; 1.70A {Streptococcus pneumoniae} PDB: 3g69_A*
Probab=22.34 E-value=51 Score=29.90 Aligned_cols=28 Identities=14% Similarity=0.306 Sum_probs=22.4
Q ss_pred ecCCcccCceEEEEeccccceeeeeeCCEE
Q 014974 216 DFSGVEIGKMYEVVVTTYRGFYRYRLGDIV 245 (415)
Q Consensus 216 ~l~ele~G~~YelVvTt~~GLyRYriGDvV 245 (415)
.|++|+.|. .+.|++..|-|+|++-++-
T Consensus 125 ~L~~lk~GD--~I~v~~~~~~~~Y~V~~~~ 152 (212)
T 3g66_A 125 QLDKMKKGD--IFYLHVLDQVLAYQVDQIV 152 (212)
T ss_dssp TGGGCCTTC--EEEEEETTEEEEEEEEEEE
T ss_pred cHhhCCcCC--EEEEEECCeEEEEEEeeEE
Confidence 567888998 6888889999999885543
No 54
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=21.88 E-value=37 Score=28.06 Aligned_cols=25 Identities=28% Similarity=0.479 Sum_probs=21.1
Q ss_pred cccCceEEEEeccccc--eeeeeeCCE
Q 014974 220 VEIGKMYEVVVTTYRG--FYRYRLGDI 244 (415)
Q Consensus 220 le~G~~YelVvTt~~G--LyRYriGDv 244 (415)
.-.|+.|+++|...+| +|||--|+.
T Consensus 38 f~Sgq~~Df~v~d~~G~~VwrwS~~~~ 64 (120)
T 3isy_A 38 FSTGQKFELVVYDSEHKERYRYSKEKM 64 (120)
T ss_dssp ESSSCCEEEEEECTTCCEEEETTTTCC
T ss_pred eCCCCEEEEEEECCCCCEEEEccccch
Confidence 5689999999999888 999987663
No 55
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=20.85 E-value=3.4e+02 Score=25.84 Aligned_cols=64 Identities=9% Similarity=0.043 Sum_probs=41.6
Q ss_pred ecCCCcEEEEEeeCCC------------ccee-ecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEE
Q 014974 250 FYNSSPQVEFVMRAPK------------SSFE-IISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVE 316 (415)
Q Consensus 250 f~~~~P~i~F~gR~~~------------l~gE-kl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE 316 (415)
..++.-||-+++|... +..- +-.+-.+.+++..+.. .|+.+.-.-..+- .+.++.|.+|+|
T Consensus 177 ~~~N~TRFlvl~~~~~~~~~~~~~kTSl~f~~~~~~pGaL~~~L~~Fa~-----~gINLtkIESRP~-~~~~~~Y~FfiD 250 (313)
T 3mwb_A 177 NPDAVTRFILVSRPGALPERTGADKTTVVVPLPEDHPGALMEILDQFAS-----RGVNLSRIESRPT-GQYLGHYFFSID 250 (313)
T ss_dssp CTTCEEEEEEEECSCCCCCCCSSEEEEEEEECSSCCTTHHHHHHHHHHT-----TTCCEEEEEEEEC-SSSTTSEEEEEE
T ss_pred CCcceeEEEEEecCCCCCCCCCCCeEEEEEEeCCCCCCHHHHHHHHHHH-----CCccEEEEEEeec-CCCCccEEEEEE
Confidence 3456667777777541 2222 1235667788887755 6887777666643 345789999999
Q ss_pred eec
Q 014974 317 IRE 319 (415)
Q Consensus 317 ~~~ 319 (415)
+.+
T Consensus 251 ~eg 253 (313)
T 3mwb_A 251 ADG 253 (313)
T ss_dssp EES
T ss_pred EeC
Confidence 975
No 56
>1t2w_A Sortase; transpeptidase, beta barrel, hydrolase; 1.80A {Staphylococcus aureus} SCOP: b.100.1.1 PDB: 1t2o_A 1ija_A 2kid_A* 1t2p_A
Probab=20.69 E-value=61 Score=27.14 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=22.2
Q ss_pred ecCCcccCceEEEEeccccceeeeeeCCEE
Q 014974 216 DFSGVEIGKMYEVVVTTYRGFYRYRLGDIV 245 (415)
Q Consensus 216 ~l~ele~G~~YelVvTt~~GLyRYriGDvV 245 (415)
.|++++.|. ++.|++..+-|+|++-++-
T Consensus 71 ~L~~l~~Gd--~i~v~~~~~~~~Y~V~~~~ 98 (145)
T 1t2w_A 71 NLKAAKKGS--MVYFKVGNETRKYKMTSIR 98 (145)
T ss_dssp TGGGCCTTC--EEEEEETTEEEEEEEEEEE
T ss_pred ChhhCCCCC--EEEEEECCEEEEEEEEEEE
Confidence 567889998 5778888899999985553
No 57
>2vjv_A Transposase ORFA; DNA-binding protein, protein-DNA complex, HUH motif, DNA stem loop, transposition; 1.90A {Helicobacter pylori} SCOP: d.58.57.1 PDB: 2vhg_A 2vic_A 2vju_A 2vih_A 2a6m_A 2a6o_A
Probab=20.19 E-value=3.8e+02 Score=22.32 Aligned_cols=96 Identities=11% Similarity=0.157 Sum_probs=55.3
Q ss_pred cceeecCHHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChh
Q 014974 266 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSI 345 (415)
Q Consensus 266 l~gEkl~e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~ 345 (415)
+.++ ....+.+.+.+.+. . .++.+.+|.+. |-|..++|++... . .-...+..+-..--..+|..
T Consensus 36 f~~~--~~~~l~~~l~~~~~---~-~~~~i~a~~vm------pDHVHlLv~~~p~---~-slS~~~~~lK~~sSr~i~~~ 99 (159)
T 2vjv_A 36 LVGA--VEMRLKEIIQEVAK---E-LRVEIIEMQTD------KDHIHILADIDPS---F-GVMKFIKTAKGRSSRILRQE 99 (159)
T ss_dssp CSHH--HHHHHHHHHHHHHH---H-TTCEEEEEEEE------TTEEEEEEECCTT---T-CHHHHHHHHHHHHHHHHHHH
T ss_pred cCcc--HHHHHHHHHHHhhc---c-CCEEEEEEeec------CCcEEEEEecCCC---c-chhHHHhhccccccHHHHHH
Confidence 5443 35667788888777 6 79999999876 5688899987432 0 11122222222222223444
Q ss_pred HHHhhhc-CCC--CCeEEEEcCCChHHHHHHHHHh
Q 014974 346 YKVQRDR-GEI--SPLSVSIVKPGTFDRLLQVAIE 377 (415)
Q Consensus 346 Y~~~R~~-g~l--~p~~v~~v~~Gtf~~~~~~~~~ 377 (415)
|...|.. |.+ ..--++.|...+++...++...
T Consensus 100 ~~~~~~~~~~lWq~~Y~~~tv~~~~~~~i~~YI~~ 134 (159)
T 2vjv_A 100 FNHLKTKLPTLWTNSCFISTVGGAPLNVVKQYIEN 134 (159)
T ss_dssp CHHHHHSCSCSBCSCEEEEEECSSCHHHHHHHHTC
T ss_pred chhhhhcCccceeCCEEeEEeCCccHHHHHHHHHh
Confidence 4433222 323 4556777776688888877433
No 58
>1x7v_A PA3566 protein, APC5058; structural genomics, protein structure initiative, midwest center for structural genomics, alpha-beta plait, PSI; 1.78A {Pseudomonas aeruginosa} SCOP: d.58.4.11
Probab=20.03 E-value=2.7e+02 Score=20.55 Aligned_cols=74 Identities=7% Similarity=0.079 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhhhccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHh-ChhHHHhhh
Q 014974 273 ERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAF-GSIYKVQRD 351 (415)
Q Consensus 273 e~~v~~av~~a~~~l~~~~g~~l~~f~~~~d~~~~~~~Y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~L-n~~Y~~~R~ 351 (415)
++++.+++.+.....+.--|+ + .|.+..+.. .|..|+++-+..+ . +.++..+ .++|+..+.
T Consensus 20 ~~~~~~~~~~~~~~~~~epG~-l-~~~~~~~~~-~p~~~~~~e~w~~--------~-------~a~~~h~~s~~~~~~~~ 81 (99)
T 1x7v_A 20 AEALERELRALVAPSRAEAGC-L-QYDLHQDRH-DSHLFYMIEQWRD--------D-------AALERHQNTEHFLRFSR 81 (99)
T ss_dssp HHHHHHHHHHHHHHHHHSTTE-E-EEEEEECSS-CTTEEEEEEEESS--------H-------HHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCCc-e-EEEEEecCC-CCCEEEEEEEECC--------H-------HHHHHHhcCHHHHHHHH
Confidence 445555555543322221453 2 566665543 3778876544432 2 3456666 677777664
Q ss_pred cC--CCCCeEEEEcC
Q 014974 352 RG--EISPLSVSIVK 364 (415)
Q Consensus 352 ~g--~l~p~~v~~v~ 364 (415)
.. ...+++|..+.
T Consensus 82 ~~~~~~~~~~v~~~~ 96 (99)
T 1x7v_A 82 GNEALLQNVKIDQLY 96 (99)
T ss_dssp TCGGGEEEEEEEEEE
T ss_pred HHHHhcCCceEEEEE
Confidence 32 25666666553
Done!