BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014978
(415 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/383 (73%), Positives = 328/383 (85%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE+L DKM+G TC+ALLH+YVQNK S +AEALMEKMSECGFLKCPLPYNHM++LYI
Sbjct: 257 EKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYI 316
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S+GQL+KVP M+QELKKNTSPDVVTYNLWL CASQND ETAEK LE+KK KIDPDW++
Sbjct: 317 SDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVT 376
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS+LT+LYIK L +KAATTL EMEKRT RK R+AYSSL+SL+TNM KD V RIWKK+
Sbjct: 377 YSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLK 436
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S+F KMNDAEYTC+ISSLVKLGEFE+AEN+Y EW S+S TGD RVPNILLAAYIN+N++E
Sbjct: 437 SIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEME 496
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
MAE FYN++V +GI P YTTWELLTWGYLKK QMEKVL+ F+KA+GSV+KW PD +L+
Sbjct: 497 MAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVRE 556
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
Y LEEQG+I+GAE +LV LR AGHVSTEIYN LLR YAKAGKMPLI+ E M+KD V+M
Sbjct: 557 VYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEM 616
Query: 392 DAETQKVLKITSEMPVSEVSSIF 414
D ET +++K TS+M VSEVSS F
Sbjct: 617 DEETHRLIKETSKMCVSEVSSKF 639
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/383 (73%), Positives = 328/383 (85%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE+L DKM+G TC+ALLH+YVQNK S +AEALMEKMSECGFLKCPLPYNHM++LYI
Sbjct: 144 EKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYI 203
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S+GQL+KVP M+QELKKNTSPDVVTYNLWL CASQND ETAEK LE+KK KIDPDW++
Sbjct: 204 SDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVT 263
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS+LT+LYIK L +KAATTL EMEKRT RK R+AYSSL+SL+TNM KD V RIWKK+
Sbjct: 264 YSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLK 323
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S+F KMNDAEYTC+ISSLVKLGEFE+AEN+Y EW S+S TGD RVPNILLAAYIN+N++E
Sbjct: 324 SIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEME 383
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
MAE FYN++V +GI P YTTWELLTWGYLKK QMEKVL+ F+KA+GSV+KW PD +L+
Sbjct: 384 MAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVRE 443
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
Y LEEQG+I+GAE +LV LR AGHVSTEIYN LLR YAKAGKMPLI+ E M+KD V+M
Sbjct: 444 VYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEM 503
Query: 392 DAETQKVLKITSEMPVSEVSSIF 414
D ET +++K TS+M VSEVSS F
Sbjct: 504 DEETHRLIKETSKMCVSEVSSKF 526
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 274/374 (73%), Positives = 321/374 (85%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE+L DKM+G TC+ALLH+YVQNK S +AEALMEKMSECGFLKCPLPYNHM++LYI
Sbjct: 144 EKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYI 203
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S+GQL+KVP M+QELKKNTSPDVVTYNLWL CASQND ETAEK LE+KK KIDPDW++
Sbjct: 204 SDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVT 263
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS+LT+LYIK L +KAATTL EMEKRT RK R+AYSSL+SL+TNM KD V RIWKK+
Sbjct: 264 YSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLK 323
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S+F KMNDAEYTC+ISSLVKLGEFE+AEN+Y EW S+S TGD RVPNILLAAYIN+N++E
Sbjct: 324 SIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEME 383
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
MAE FYN++V +GI P YTTWELLTWGYLKK QMEKVL+ F+KA+GSV+KW PD +L+
Sbjct: 384 MAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVRE 443
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
Y LEEQG+I+GAE +LV LR AGHVSTEIYN LLR YAKAGKMPLI+ E M+KD V+M
Sbjct: 444 VYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEM 503
Query: 392 DAETQKVLKITSEM 405
D ET +++K TS+M
Sbjct: 504 DEETHRLIKETSKM 517
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
KT +D + S+L S+Y K PE+A + E+ K+ ++++S++S Y+ MG+
Sbjct: 595 KTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEV----LNKDIISWTSMISAYSRMGWAT 650
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E + ++ +M+ + +C++SS +A+ + T D V N LL
Sbjct: 651 ECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALL 710
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSV 319
+ Y L++AE F+ R+ + + W L+ GY K G + K + F+ + +G +
Sbjct: 711 SMYCKFGFLKLAEKFFGRVNEQN----FEAWNLMVSGYGKIGLIMKCIGLFREMQCLG-I 765
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT-----LRNAGHVSTEIYNSLLRTYAKAG 374
+ ++ ++L GA HL + ++N + + NSL+ Y K+G
Sbjct: 766 ESDSNSLVSVVSSCSQL-------GATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSG 818
Query: 375 KMPLI--IVERMQKDNV 389
+ + I R+ +D V
Sbjct: 819 NLTIARRIFCRIPRDIV 835
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/382 (71%), Positives = 318/382 (83%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE++PDKMR CSALLH YVQNK ++AEALMEKMSECGFLK LPYNHML++Y+
Sbjct: 128 EKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKNALPYNHMLSVYV 187
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+NGQL+KV +++QELKK TSPDVVTYN+WL ACASQND ETAEK F+ELKK+K+DPDW++
Sbjct: 188 ANGQLEKVAEIIQELKKKTSPDVVTYNMWLTACASQNDVETAEKVFMELKKSKLDPDWVT 247
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YSTLT+LYIK E EKAA TLKE+EKR +KNRV YSSLLSL+ NM KD + R W KM
Sbjct: 248 YSTLTNLYIKKECLEKAAYTLKEVEKRASKKNRVTYSSLLSLHANMKDKDGLHRTWNKMK 307
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S+F KMNDAEY C+ISSLVKLGEF AEN+Y+EWES+S T D RV NI+LA+YINRNQ+E
Sbjct: 308 SVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDSRVSNIVLASYINRNQME 367
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
AE+F R+V KGI PCYTTWELLT G+LK QMEKVLE FKKA+ SVRKW PD RLI
Sbjct: 368 DAENFCQRMVQKGITPCYTTWELLTCGHLKTEQMEKVLENFKKALCSVRKWTPDKRLIGD 427
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
+ LEE+GDI+GAE LLV LR+AGHVST IYNSLLRTYAKAGKMP+II ERMQKDNV++
Sbjct: 428 IFKNLEERGDIEGAEKLLVILRDAGHVSTMIYNSLLRTYAKAGKMPVIIEERMQKDNVEL 487
Query: 392 DAETQKVLKITSEMPVSEVSSI 413
D ET K+++ TS M VSEVSS+
Sbjct: 488 DDETHKLIQTTSTMCVSEVSSL 509
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/384 (66%), Positives = 310/384 (80%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE+LPD+MRG TCSALLH+YVQN +AEALM KMSEC L PLPYNHM++LYI
Sbjct: 133 EKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDLLINPLPYNHMISLYI 192
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
SNG+L+KVP+++QELK NTSPD+VT+NLWLAACASQND ETAE+ LELKK KIDPDW++
Sbjct: 193 SNGKLEKVPKIIQELKMNTSPDIVTFNLWLAACASQNDVETAERVLLELKKAKIDPDWVT 252
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YSTLT+LYIK EKA T+KEME RT RK RVAYSSLLSL+TNMG KD+V RIW+KM
Sbjct: 253 YSTLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMK 312
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ F KMND EY C+ISSL+KLG+F AE++Y EWES+SGT D RV NILL +YIN++Q+E
Sbjct: 313 ASFRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDVRVSNILLGSYINQDQME 372
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
MAE F N++V KG+ PCYTTWEL TWGYLK+ +EK L+ F KAI SV KW PD RL+
Sbjct: 373 MAEDFCNQIVQKGVIPCYTTWELFTWGYLKRKDVEKFLDYFSKAISSVTKWSPDQRLVQE 432
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
A+ +EEQ GAE LLV LRNAGHV+T IYN L+TYA AGKMP+I+ ERM+KDNV++
Sbjct: 433 AFKIIEEQAHTKGAEQLLVILRNAGHVNTNIYNLFLKTYATAGKMPMIVAERMRKDNVKL 492
Query: 392 DAETQKVLKITSEMPVSEVSSIFS 415
D ET+++L +TS+M VS+VS I S
Sbjct: 493 DEETRRLLDLTSKMCVSDVSRILS 516
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/386 (66%), Positives = 318/386 (82%), Gaps = 2/386 (0%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + E FFE+LPD+MRG TC+ALLH+YV+ K +AEALMEKM +C F+K
Sbjct: 114 VAKVRGLTSA--EKFFEDLPDEMRGWQTCTALLHTYVKCKDVVKAEALMEKMRDCSFVKN 171
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
PLPYNHM++LYI++G+ DK ++++ELKK+T+PDVVT+NLWL+ CAS ND E+A+K LE
Sbjct: 172 PLPYNHMISLYIADGEFDKAKRIVEELKKSTTPDVVTFNLWLSMCASLNDVESAKKVLLE 231
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
LKK KI+ DWI+YSTLT+LY+K +L E A +TLKEMEKR RKNR+AYSSLLSLYTNMG
Sbjct: 232 LKKLKIEADWITYSTLTNLYLKNKLLEDAVSTLKEMEKRASRKNRLAYSSLLSLYTNMGD 291
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
KD V RIW KM SLF KMNDAEYTC++SSL+KL E EKAEN+Y EWES+SGTGDP+V NI
Sbjct: 292 KDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAENLYTEWESVSGTGDPQVANI 351
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
LLAAYINRNQ+E +E+FY R+V KG+ PCYTTWELLTWG+LK QMEKVL+CFKKAI V
Sbjct: 352 LLAAYINRNQIEDSENFYRRMVEKGVCPCYTTWELLTWGHLKTKQMEKVLDCFKKAITIV 411
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI 379
+ W PD RL+ + LEE+G+ +GAE LV LRNAG+VSTEIYNSLLRTYAKAGKMPLI
Sbjct: 412 KTWSPDKRLVREVFKILEEKGNAEGAEEFLVMLRNAGYVSTEIYNSLLRTYAKAGKMPLI 471
Query: 380 IVERMQKDNVQMDAETQKVLKITSEM 405
+ ERM+KD V++D ET +++K TS M
Sbjct: 472 VTERMKKDGVELDEETHRLIKTTSSM 497
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/383 (65%), Positives = 306/383 (79%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE+LPDK+R C++LLH+YVQN S +AEALMEKMSECGFLK PL +NHML+L+I
Sbjct: 136 EKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHI 195
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
SN QL+KVP +++ LKKNT PDVVTYNL L C QND E AE FLE+KKTKI PDW+S
Sbjct: 196 SNKQLEKVPALIEGLKKNTKPDVVTYNLLLNVCTLQNDTEAAENIFLEMKKTKIQPDWVS 255
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+STL +LY K +L EKAA TLKEMEK + NR++ SSLLSLYTN+G K+EV RIWKK+
Sbjct: 256 FSTLANLYCKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTNLGDKNEVYRIWKKLK 315
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S F KM+D EY C+ISSLVKL E E+AE +Y EWES+SGT D RV N++L AYI +NQ+E
Sbjct: 316 SSFRKMSDREYMCMISSLVKLNELEEAEKLYTEWESVSGTRDTRVSNVMLGAYIKKNQIE 375
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
AESFYNR++ KG P YTTWELLTWGYLK+ QMEKVL F+KA+ V+KW D RL+
Sbjct: 376 QAESFYNRMLQKGTVPSYTTWELLTWGYLKENQMEKVLHFFRKAVNRVKKWNADERLVKG 435
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
KLEEQG+I+G E LL+ LRNAGHV TEIYNSLLRTYAKAGKMPLI+ ERM++DNVQ+
Sbjct: 436 VCKKLEEQGNINGVEQLLLILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMERDNVQL 495
Query: 392 DAETQKVLKITSEMPVSEVSSIF 414
+ ET+++L++TS+M VSEVSS
Sbjct: 496 NDETRELLRLTSKMCVSEVSSTL 518
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/387 (62%), Positives = 308/387 (79%), Gaps = 6/387 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE+LPDKMRG TC+ALLH+YVQN + +AEALM KMSECGFL+ P+PYN M++LYI
Sbjct: 125 EKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYI 184
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
SNG+L+KVP++ +ELK NTSPDVVT+NL L ACAS+ND ETAE+ L+LKK K+DPDW++
Sbjct: 185 SNGKLEKVPKLFEELKVNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVDPDWVT 244
Query: 152 YSTLTSLYIKM----ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
YSTLT+LYI+ + EKAA+TLKEMEKRT R+ RVAYSSLLSL+ NMG DEV RIW
Sbjct: 245 YSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIW 304
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
KM + F KM+D EY C+ISSLVKLG+F EN+Y EWES+SGT D RV N+LL +Y+++
Sbjct: 305 GKMKACFCKMSDDEYVCMISSLVKLGDFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDQ 364
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
Q+EMAE F N+LV KG+ Y++WELLT GYLKK ++K L F KAI SV++W+PD R
Sbjct: 365 GQMEMAEIFCNQLVEKGVCLSYSSWELLTRGYLKKKDVKKFLHYFGKAISSVKQWIPDPR 424
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
L+ A+ ++EQ I+GAE LLV LRNAGHV+T IYN L+TYA AGKMPL++ ERM+KD
Sbjct: 425 LVQEAFTVIQEQAHIEGAEQLLVILRNAGHVNTNIYNLFLKTYAAAGKMPLVVAERMKKD 484
Query: 388 NVQMDAETQKVLKITSEMPVSEVSSIF 414
NVQ+D ET ++L +TS+M V +S+++
Sbjct: 485 NVQLDKETHRLLDLTSKMCV--ISAVY 509
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 231/384 (60%), Positives = 305/384 (79%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE+LPD+MRG C++LLHSYVQNK S +AEAL EKM ECGFLK LPYNHML+++I
Sbjct: 142 EKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMFI 201
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S GQ +KV +++ELK TSPD+VTYNLWL A AS ND E AEK +L+ K++K++PDW++
Sbjct: 202 SKGQFEKVSVLIKELKMKTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKESKLNPDWVT 261
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS LT+LY K + EKA LKEMEK +KNRVAY+SL+SL+ N+G KD V WKK+
Sbjct: 262 YSVLTNLYAKTDNLEKAKLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVR 321
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S F KMNDAEY +IS++VKLGEFE+A+ +YDEWES+SGTGD R+PN++LA Y+NR+++
Sbjct: 322 SSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEIL 381
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
+ E FY R+V KGI P Y+TWE+LTW YLK+ +EKVL+CF+KAI SV+KW + RL+ A
Sbjct: 382 LGEKFYERIVEKGINPSYSTWEILTWAYLKRKDLEKVLDCFEKAIDSVKKWTVNVRLVKA 441
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
+LEEQG++ GAE L+ L+ AGHV+T++YNSLLRTYAKAG+M LI+ ERM KDNV++
Sbjct: 442 VCKELEEQGNVKGAEKLMTLLQKAGHVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVEL 501
Query: 392 DAETQKVLKITSEMPVSEVSSIFS 415
D ET++++++TS M V+E+SS S
Sbjct: 502 DEETKELIRLTSRMRVTEISSTIS 525
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/384 (60%), Positives = 305/384 (79%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE++PD+MRG C++LLHSYVQNK S +AEAL EKM ECGFLK LPYNHML++YI
Sbjct: 149 EKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYI 208
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S GQ +KVP +++ELK TSPD+VTYNLWL A AS ND E AEK +L+ K+ K++PDW++
Sbjct: 209 SRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVT 268
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS LT+LY K + EKA LKEMEK +KNRVAY+SL+SL+ N+G KD V WKK+
Sbjct: 269 YSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVK 328
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S F KMNDAEY +IS++VKLGEFE+A+ +YDEWES+SGTGD R+PN++LA Y+NR+++
Sbjct: 329 SSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVL 388
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
+ E FY R+V KGI P Y+TWE+LTW YLK+ MEKVL+CF KAI SV+KW + RL+
Sbjct: 389 LGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKKWTVNVRLVKG 448
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
A +LEEQG++ GAE L+ L+ AG+V+T++YNSLLRTYAKAG+M LI+ ERM KDNV++
Sbjct: 449 ACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVEL 508
Query: 392 DAETQKVLKITSEMPVSEVSSIFS 415
D ET++++++TS+M V+E+SS S
Sbjct: 509 DEETKELIRLTSQMRVTEISSTIS 532
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 231/384 (60%), Positives = 305/384 (79%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE++PD+MRG C++LLHSYVQNK S +AEAL EKM ECGFLK LPYNHML++YI
Sbjct: 149 EKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYI 208
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S GQ +KVP +++ELK TSPD+VTYNLWL A AS ND E AEK +L+ K+ K++PDW++
Sbjct: 209 SRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVT 268
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS LT+LY K + EKA L+EMEK +KNRVAY+SL+SL+ N+G KD V WKK+
Sbjct: 269 YSVLTNLYAKTDNVEKARLALREMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVK 328
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S F KMNDAEY +IS++VKLGEFE+A+ +YDEWES+SGTGD R+PN++LA Y+NR+++
Sbjct: 329 SSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVL 388
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
+ E FY R+V KGI P Y+TWE+LTW YLK+ MEKVL+CF KAI SV+KW + RL+
Sbjct: 389 LGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKKWTVNVRLVKG 448
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
A +LEEQG++ GAE L+ L+ AG+V+T++YNSLLRTYAKAG+M LI+ ERM KDNV++
Sbjct: 449 ACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVEL 508
Query: 392 DAETQKVLKITSEMPVSEVSSIFS 415
D ET++++++TS+M V+E+SS S
Sbjct: 509 DEETKELIRLTSQMRVTEISSTIS 532
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 196/384 (51%), Positives = 283/384 (73%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE++P++ +GP TC+ALLH+YVQ+ + +AEA++E+M++ G+L C LP+NHM++LY+
Sbjct: 108 EKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYM 167
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S+G+L+KVP+M++EL++ T PD+VTYN+WL C+ +N + AEK + +K ++ PDW++
Sbjct: 168 SSGELEKVPEMIKELRRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDLMKDERVVPDWMT 227
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+S L S+YI L K L EMEKR RK R AYSSLL+LY ++ + + R+W+KM
Sbjct: 228 FSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMR 287
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
F K +D EY C+++SL + G+ +AE+ Y EWES SGT D R+PN +LA YI +E
Sbjct: 288 ETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMME 347
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
AE F + +V KG+KP Y+TWEL WGYL G+M+KVLEC KKA+ + KW P+ +L TA
Sbjct: 348 KAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALSCLEKWDPNPQLATA 407
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
Y+++EE+GDI+ AE LLV R AG+V+TEIYNS+LRTYAKA MPLI+ ERM +D V M
Sbjct: 408 IYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKAELMPLIVDERMDQDKVSM 467
Query: 392 DAETQKVLKITSEMPVSEVSSIFS 415
D ET+ +L++TS+ P+ EVS++ S
Sbjct: 468 DDETRSLLRLTSKYPIGEVSTLMS 491
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 289/396 (72%), Gaps = 2/396 (0%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + E FFE++P++ +GP TC+ALLH+YVQ+ + +AEA++E+M++ G+L C
Sbjct: 121 VAKVRGLPSA--EKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTC 178
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
LP+NHM++LY+S+G+L+KVP+M++EL++ T PD+VTYN+WL C+ +N + AEK +
Sbjct: 179 ALPFNHMMSLYMSSGELEKVPEMIKELRRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDL 238
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K ++ PDW+++S L S+YI L K L EMEKR RK R AYSSLL+LY ++
Sbjct: 239 MKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLSD 298
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + R+W+KM F K +D EY C+++SL + G+ +AE+ Y EWES SGT D R+PN
Sbjct: 299 RGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNT 358
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+LA YI +E AE F + +V KG+KP Y+TWEL WGYL G+M+KVLEC KKA+ +
Sbjct: 359 ILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALSCL 418
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI 379
KW P+ +L TA Y+++EE+GDI+ AE LLV R AG+V+TEIYNS+LRTYAKA MPLI
Sbjct: 419 EKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKAELMPLI 478
Query: 380 IVERMQKDNVQMDAETQKVLKITSEMPVSEVSSIFS 415
+ ERM +D V MD ET+ +L++TS+ P+ EVS++ S
Sbjct: 479 VDERMDQDKVSMDDETRSLLRLTSKYPIGEVSTLMS 514
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 289/396 (72%), Gaps = 2/396 (0%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + E FFE++P++ +GP TC+ALLH+YVQ+ + +AEA++E+M++ G+L C
Sbjct: 51 VAKVRGLPSA--EKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTC 108
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
LP+NHM++LY+S+G+L+KVP+M++EL++ T PD+VTYN+WL C+ +N + AEK +
Sbjct: 109 ALPFNHMMSLYMSSGELEKVPEMIKELRRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDL 168
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K ++ PDW+++S L S+YI L K L EMEKR RK R AYSSLL+LY ++
Sbjct: 169 MKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLSD 228
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + R+W+KM F K +D EY C+++SL + G+ +AE+ Y EWES SGT D R+PN
Sbjct: 229 RGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNT 288
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+LA YI +E AE F + +V KG+KP Y+TWEL WGYL G+M+KVLEC KKA+ +
Sbjct: 289 ILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALSCL 348
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI 379
KW P+ +L TA Y+++EE+GDI+ AE LLV R AG+V+TEIYNS+LRTYAKA MPLI
Sbjct: 349 EKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKAELMPLI 408
Query: 380 IVERMQKDNVQMDAETQKVLKITSEMPVSEVSSIFS 415
+ ERM +D V MD ET+ +L++TS+ P+ EVS++ S
Sbjct: 409 VDERMDQDKVSMDDETRSLLRLTSKYPIGEVSTLMS 444
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 196/396 (49%), Positives = 289/396 (72%), Gaps = 3/396 (0%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + E FFE++P++ +GP TC+ALLH+YVQN +AEA++ +M++ G+L C
Sbjct: 108 VAKVRGLASA--EKFFEDVPERAKGPSTCNALLHAYVQNGVRDKAEAMLREMADAGYLTC 165
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
LP+NHM+++Y+S+G+L+KVP+M++EL++ T PD+VTYN+WL C+ +N +TAEK F
Sbjct: 166 ALPFNHMMSMYMSSGELEKVPEMIKELRRYTIPDLVTYNIWLTYCSRKNSVKTAEKVFDL 225
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K K+ PDW+++S + S+YI L K L EMEKR RK R AYSSLL+LY ++
Sbjct: 226 MKDDKVFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRASRKERTAYSSLLTLYASLSD 285
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + R+W KM +F K +D EY C+++SL + G+ AE++Y EWES SGT D R+PN
Sbjct: 286 RGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAESVYSEWESESGTRDSRIPNT 345
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ-MEKVLECFKKAIGS 318
+L+ +I ++EMAESF ++ KG+KP Y+TWEL WGYL + ++K+LEC KKA+ S
Sbjct: 346 ILSFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGYLGNDERIDKILECLKKALSS 405
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
+ KW P+ +L+ A ++ +E++GDI+ AE LLV LR AG+V+TEIYNS+LRTY+KA MPL
Sbjct: 406 LDKWEPNPQLVAALFSLIEKRGDIEAAEELLVVLRGAGYVTTEIYNSVLRTYSKAEMMPL 465
Query: 379 IIVERMQKDNVQMDAETQKVLKITSEMPVSEVSSIF 414
II ERM +D V MD ET+ +LK+TS+ P+ EVS+I
Sbjct: 466 IIDERMDQDKVSMDEETRGLLKLTSKYPIGEVSTIM 501
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 287/397 (72%), Gaps = 3/397 (0%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + E FFE++P++ +GP TC++LLH+YVQ+ +AEA++++M++ G+L C
Sbjct: 116 VAKVRGLASA--EKFFEDVPERAKGPSTCNSLLHAYVQHGARDKAEAMLKEMADAGYLTC 173
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
LP+NHM++LY+S G+L+KVP+M++EL++ T PD+VTYN+WL C+ +N ++AEK F
Sbjct: 174 ALPFNHMMSLYMSVGELEKVPEMIKELRRYTIPDLVTYNIWLTYCSRKNSVKSAEKVFDL 233
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K ++ PDW+++S L S+YI L K L EMEKR RK R AYSSLL++Y ++
Sbjct: 234 MKDDRVVPDWMTFSLLASIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTMYASLSD 293
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + R+W KM F K +DAEY C+++SL + G+ AE +Y EWES SGT D R+PN
Sbjct: 294 RGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEFVYGEWESQSGTKDSRIPNT 353
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ-MEKVLECFKKAIGS 318
+L+ YI ++E AESF +V KG+KP Y+TWEL WGYL + +KV+EC KKA+ S
Sbjct: 354 ILSFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGYLGNDERTDKVMECLKKALSS 413
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
+ KW P+ +L+ A ++++E++GDI+ AE LLV LR AG+V+TEIYN +LRTYAKA MPL
Sbjct: 414 LEKWEPNPQLVAALFSQIEKKGDIEAAEELLVVLRGAGYVTTEIYNLVLRTYAKAEMMPL 473
Query: 379 IIVERMQKDNVQMDAETQKVLKITSEMPVSEVSSIFS 415
II ERM +D V MD ET+++LK TS+ P+ EVS++ S
Sbjct: 474 IIDERMDQDKVSMDDETRRLLKSTSKYPIGEVSTLMS 510
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 188/396 (47%), Positives = 283/396 (71%), Gaps = 2/396 (0%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + + FFE++P++ + P TC+ALLH+YVQ+ +AEA+M +M+ G+L C
Sbjct: 108 VAKVRGLASAVK--FFEDMPERAKAPSTCNALLHAYVQHGAREKAEAMMAEMARAGYLTC 165
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
LP+NHM++LY+++G+L++VP+M++EL++ T PD+VTYN+WL C+ + ++AEK F
Sbjct: 166 ALPFNHMMSLYMASGELERVPEMIKELRRYTVPDLVTYNMWLTYCSKKKSVKSAEKVFAL 225
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K ++ PDW+++S L S+YI L + L EMEK RK R AYSSLL+LY ++
Sbjct: 226 MKDDRVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKMASRKERAAYSSLLTLYASLSD 285
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + R+W KM F K +D EY C+++SL + + AE +Y EWES SGT D R+PN
Sbjct: 286 RGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEGLYREWESASGTRDSRIPNT 345
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+L+ YI +E AESF ++V KG+KP Y+TWEL WGYL + +KVLEC KKA+ S+
Sbjct: 346 ILSYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGYLGDNKTDKVLECLKKALSSL 405
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI 379
KW P+H L TA ++++E+ GDI+ AE LLV R+AG+V+TE+YNS+LRTYA+A MPLI
Sbjct: 406 EKWEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDAGYVTTEMYNSVLRTYAEAKLMPLI 465
Query: 380 IVERMQKDNVQMDAETQKVLKITSEMPVSEVSSIFS 415
+ ERM++D V MD ET+++L++TS+ P+ EVS++ S
Sbjct: 466 VDERMEQDKVAMDVETRRLLRLTSKYPIGEVSTLMS 501
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/392 (47%), Positives = 280/392 (71%), Gaps = 3/392 (0%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + + FFE++P++ +GP TC+ALLH+YVQN +AEA++ +M+ G+L C
Sbjct: 109 VAKVRGLASATK--FFEDMPERAKGPSTCNALLHAYVQNGAREKAEAMLAEMARVGYLTC 166
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
LP+NHM++LY++ G+L++VP+M++EL++ T PD+VTYN+WL C+ ++ ++AEK F
Sbjct: 167 ALPFNHMMSLYMATGELERVPEMIKELRRYTLPDLVTYNIWLTYCSKKDSVKSAEKVFGL 226
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K + PDW+++S L S+YI L + L EMEKR RK R AYSSLL+LY ++
Sbjct: 227 MKDDCVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKRASRKERAAYSSLLTLYASLSD 286
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + R+W KM F K +D EY C+++SL++ + AE+I+ EWES SGT D R+PN
Sbjct: 287 RGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAESIFSEWESTSGTRDSRIPNT 346
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+L+ YI ++ AESF + +V KG+KP Y+TWE WGYL + +KVLEC KKA+ +
Sbjct: 347 ILSYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGYLGD-KTDKVLECMKKALSCL 405
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI 379
KW P+H L TA ++++E+ GDI+ AE LLV R+A +V+TE+YNS+LRTYA+A MPLI
Sbjct: 406 EKWEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDAEYVTTEMYNSVLRTYAEAKLMPLI 465
Query: 380 IVERMQKDNVQMDAETQKVLKITSEMPVSEVS 411
+ ERM++D V MD ET+++L++TS+ P+ EVS
Sbjct: 466 VDERMEQDKVAMDVETKRLLRLTSKYPIGEVS 497
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 222/381 (58%), Gaps = 8/381 (2%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E ++ +L + T ALL+ YVQ K ++EA+ME++ + GF+K PY M+ LY+
Sbjct: 180 EKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSEAIMEELKDLGFIKTAFPYTEMMTLYM 239
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
+ Q +KVP ++QE+KK S D+ YN+W+ + A+ +D + + F E+++ I+ DW
Sbjct: 240 NTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSYAALSDMDQVAEVFNEIERDDNINTDW 299
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRT----CRKNRVAYSSLLSLYTNMGYKDEVLR 205
YSTL ++YI ++ +KA + LKEME + +K+++AY+ L+SL+ +G KDEV R
Sbjct: 300 SIYSTLANIYINAKVLDKAGSALKEMENKMKEIETKKDQLAYNHLISLHGRLGNKDEVYR 359
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
IW+ F KM + Y C++SSLV +G+ E AE +WES+ D R+ LL AYI
Sbjct: 360 IWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGAEVFIKKWESMKTFDDSRIYYALLNAYI 419
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWV 323
+ L+ AE R+V KG KP TWE L GY++ Q+ K +E K+ +I W
Sbjct: 420 EKGWLQKAELLLERVVDKGGKPNAKTWETLAEGYIQNEQIHKAMEAMKRSLSIEGNSPWQ 479
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVER 383
P + A E+QGD+ AE LR VSTEIYNSLLRTY GK+P I E
Sbjct: 480 PKSVNVLALLKHFEKQGDVKSAEEFFKILRGVKFVSTEIYNSLLRTYVYVGKVPPRISEL 539
Query: 384 MQKDNVQMDAETQKVLKITSE 404
M +DNV D ET +LK T E
Sbjct: 540 MLEDNVSPDEETDNLLKQTVE 560
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 160/221 (72%)
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
T++ + + R+W+KM F K +D EY C+++SL + G+ +AE+ Y EWES SGT D
Sbjct: 132 TSLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDS 191
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
R+PN +LA YI +E AE F + +V KG+KP Y+TWEL WGYL G+M+KVLEC KK
Sbjct: 192 RIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKK 251
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
A+ + KW P+ +L TA Y+++EE+GDI+ AE LLV R AG+V+TEIYNS+LRTYAKA
Sbjct: 252 ALSCLEKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKAE 311
Query: 375 KMPLIIVERMQKDNVQMDAETQKVLKITSEMPVSEVSSIFS 415
MPLI+ ERM +D V MD ET+ +L++TS+ P+ EVS++ S
Sbjct: 312 LMPLIVDERMDQDKVSMDDETRSLLRLTSKYPIGEVSTLMS 352
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 214/379 (56%), Gaps = 7/379 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E FF +LP+ + T ALL+ Y + EAEALMEKM E + YN ++ L
Sbjct: 108 AAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTL 167
Query: 90 YISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y GQ +++P ++QE+K ++ PD TYN+W+ A A+ ND AE+ E+K+ ++
Sbjct: 168 YTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 227
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS L S+Y+ +L EKA TLKE+EKR ++ A+ L++LY +G E+ RIW
Sbjct: 228 DWTTYSNLASIYVDAQLFEKAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIW 287
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K ++ Y +I LV L + AE + EWES D RV N+L+ AY +
Sbjct: 288 RSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKK 347
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSVRKWV 323
LE AE R + +G KP TWE+ + Y + G ++ +EC AI G +KW+
Sbjct: 348 GLLEKAEELKERAIGRGAKPNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWI 407
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPLIIVE 382
P ++ + E+Q D+DGAE + L+ A V ++ SL+RTYA AG+ ++
Sbjct: 408 PSPEVVASFMAHFEQQKDVDGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRR 467
Query: 383 RMQKDNVQMDAETQKVLKI 401
R++ +NV++ QK+L++
Sbjct: 468 RLKMENVEVSEAGQKLLEM 486
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 216/353 (61%), Gaps = 8/353 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ + + T E+FF +LP+ + ALL++YVQN+ +AE L ++M + G++
Sbjct: 148 IAKVRGVSTA--EDFFLSLPNTFKDRRVYGALLNAYVQNRMREKAETLFDEMRDKGYVTH 205
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
LP+N + LY++ + DKV M+ E+ +KN D+ +YN+WL++C SQ + E+ +
Sbjct: 206 ALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLSSCGSQGSADKMEQVYE 265
Query: 139 ELKKTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++K + I+P+W ++ST+ ++YIKM EKA L+ +E R ++R+ Y LLSLY N+
Sbjct: 266 QMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRITGRDRIPYHYLLSLYGNV 325
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G K+EV R+W S+F + + Y +ISSLV+L + E AE IY+EW SI + DPR+
Sbjct: 326 GNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKIYEEWLSIKTSYDPRIA 385
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
N+ +AAY+ + L+ A+SF++ ++ G KP TWE+L G++ + + + L C K+A
Sbjct: 386 NLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQGHISERRTSEALSCLKEAFV 445
Query: 317 --GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
GS + W P+ +T+ + EE+ D+ E L LR +GH+ + Y SLL
Sbjct: 446 TPGS-KSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSGHLKDKAYASLL 497
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 225/396 (56%), Gaps = 5/396 (1%)
Query: 10 QVRAQSYRQRVAQAQALQTRAR-ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALM 68
Q+ A + R+ +Q+ A E +FE+LP+ C LLH+YV+ + +AEALM
Sbjct: 76 QMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALM 135
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQ 127
K+++ G P P+N M+ LY++ Q ++VP ++ ++K+N P +V++YNLW++AC+
Sbjct: 136 LKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEV 195
Query: 128 NDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ +AE + ++ K ++ W + STL ++Y+K L +KA LK EK+ NR+
Sbjct: 196 SGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLG 255
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y L+++Y ++ K+EVLR+W+ + ++ Y C++ LVKLG+ +AE I+ EWE
Sbjct: 256 YFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWE 315
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S D RV N+LL AY+ ++ AES + + +G P Y TWE+L G++K M+
Sbjct: 316 SKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMD 375
Query: 307 KVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYN 364
K + KK ++ W P+H L+TA LEE G+++ + + G +Y
Sbjct: 376 KAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIHQLGVAKLPLYK 435
Query: 365 SLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLK 400
SLLR + + I++ M+KD ++MD ET +++
Sbjct: 436 SLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQ 471
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 219/392 (55%), Gaps = 9/392 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+A+ + A EN+F +LP+ + T +LL+ Y + + +AE L+ KM E
Sbjct: 100 VAKARGIT--AGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPS 157
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+ YN ++ LY GQ +KVP M+QELK +N PD TYN+W+ A A+ ND E+
Sbjct: 158 SMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIE 217
Query: 139 ELKK-TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+ + ++ PDW +YS + S+Y+ L +KA L+E+E + +++ AY L++LY +
Sbjct: 218 EMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRL 277
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G EV RIW+ + K ++ Y +I LVKL + AE ++ EW++ T D R+
Sbjct: 278 GKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIV 337
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
N+L+ AY +E A+ + +G K TWE+ Y+K G M LEC KA+
Sbjct: 338 NVLIGAYAKEGLIEKAKELKEKAPRRGGKANAKTWEIFMDYYVKSGDMAHALECMSKAVS 397
Query: 317 ---GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAK 372
G KW+P + + E++ D++GAE+LL L+N ++ EI+ SL+RTYA
Sbjct: 398 IGKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFESLIRTYAA 457
Query: 373 AGKMPLIIVERMQKDNVQMDAETQKVLKITSE 404
AGK + R++ +NV+++ T+K+L S+
Sbjct: 458 AGKSHPAMRRRLKMENVEVNEVTKKLLDEVSQ 489
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 217/389 (55%), Gaps = 7/389 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+A + A EN+F +LP+ + T +LL+ Y + + +AE L+ KM E +
Sbjct: 101 AKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMS 160
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ LY G+ +KVP M+QELK +N PD TYN+W+ A A+ ND E+ E+
Sbjct: 161 YNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMN 220
Query: 142 KT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ ++ PDW +YS + S+Y+ L +KA L+E+E + +++ AY L++LY +G
Sbjct: 221 RDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKL 280
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
EV RIW+ + K ++ Y +I LVKL + AE ++ EW++ T D R+ N+L
Sbjct: 281 TEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVL 340
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---- 316
+ AY ++ A + +G K TWE+ Y+K G M + LEC KA+
Sbjct: 341 IGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGK 400
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGK 375
G KW+P + A + E++ D++GAE+LL L+N ++ EI+ L+RTYA AGK
Sbjct: 401 GDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGK 460
Query: 376 MPLIIVERMQKDNVQMDAETQKVLKITSE 404
+ R++ +NV+++ T+K+L S+
Sbjct: 461 SHPAMRRRLKMENVEVNEATKKLLDEVSQ 489
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 219/390 (56%), Gaps = 7/390 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+A+ + A EN+F +LP+ + + S+LL+ Y + + +AEAL EK+ E
Sbjct: 102 VAKARGID--AAENYFVSLPESSKNHLSYSSLLNCYCKELLTEKAEALFEKIKELNLPVT 159
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFL 138
P+PYN ++ LY G+ DKV ++QE+K N + D TY +W+ A A+ ND E+
Sbjct: 160 PVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRALAALNDISGVERVID 219
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+K+ + DW +YS L S+Y+ + EKAA LK++EK R++ + + L++LY +G
Sbjct: 220 EMKRDGVKGDWTTYSNLASIYVNANMFEKAAKALKDLEKINTRRDLIGFQFLITLYGQIG 279
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
EV R+W+ + F + + Y +I +L KL + AE + EWES S T D R+PN
Sbjct: 280 DLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCFKEWESGSPTYDIRIPN 339
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-- 316
L+ AY LE A + R + +G +P TWE YLK G + +C KAI
Sbjct: 340 ALIGAYTKGGLLEKAMALKERALRRGARPNAKTWEFFLNYYLKNGDFKLAGDCVAKAIGK 399
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGK 375
G KW+P +I + + E++ D+DGAE L + + + +E++ SL+RTY+ AG+
Sbjct: 400 GDRGKWIPSPEIIKSFMSHFEQEKDVDGAESFLEIVKKTVDSLESEVFESLIRTYSAAGR 459
Query: 376 MPLIIVERMQKDNVQMDAETQKVL-KITSE 404
+ R++ +NV++ +K+L KI+ E
Sbjct: 460 TSSSMSRRLKMENVEVSEACKKLLNKISIE 489
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 212/378 (56%), Gaps = 7/378 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A EN+F +LP+ + T ALL+ Y + + EAEAL+EKM E + YN ++ L
Sbjct: 108 AAENYFIDLPETSKNLRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTL 167
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y GQ +++P ++QE+K N PD TYN+W+ A A+ ND E+ E+K+ ++
Sbjct: 168 YTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAA 227
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+W +YS L S+Y+ +KA LKE+EK K+ A+ L++LY G EV RIW
Sbjct: 228 NWTTYSNLASIYVDAGYFDKAEKALKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIW 287
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K + Y +I LV L + AE + EWES T D RV N++++AY
Sbjct: 288 RSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKE 347
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSVRKWV 323
++ AE R +G KP TWE+ YLK G ++ ++C A+ G+ +KWV
Sbjct: 348 GLVDKAEELKERARRRGAKPNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWV 407
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPLIIVE 382
P ++ + E+Q D+DGAE L+ L+ A V+ E++ SL+RTYA AG+ ++
Sbjct: 408 PSPVIVGSLMAHFEQQKDVDGAEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRR 467
Query: 383 RMQKDNVQMDAETQKVLK 400
R++ +NV++ + QK+L+
Sbjct: 468 RLKMENVEVSDDCQKLLE 485
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 201/340 (59%), Gaps = 4/340 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FF LP+ + +LL++YV+ K +AEAL+ M + G+ PLP+N M+ LY+
Sbjct: 155 EQFFLTLPENFKDRRVYGSLLNAYVRAKSREKAEALLHTMRDKGYALHPLPFNVMMTLYM 214
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDW 149
+ + DKV M+ E+K K+ D+ +YN+WL++C S E E + ++K I+P+W
Sbjct: 215 NLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSINPNW 274
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++ST+ ++YIKM EKA L+++E R +NR+ Y LLSLY ++G K E+ R+W
Sbjct: 275 TTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLYGSVGNKKELYRVWNV 334
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S+ + + Y ++SSL ++G+ E AE +Y+EW + + DPR+PN+L+ Y+ +Q
Sbjct: 335 YKSVVPSIPNLGYHALVSSLARMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNVYVKNDQ 394
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS--VRKWVPDHR 327
LE AE ++ +V G KP +TWE+L G+ +K + + L C +KA + W P
Sbjct: 395 LEKAEGLFDHMVEMGGKPSSSTWEILADGHTRKRCIPEALTCLRKAFSAEGSSNWRPKVL 454
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
+++ + EE+ D+ E +L LR +GH+ + Y +L+
Sbjct: 455 MLSGFFKLCEEESDVTSKEAVLELLRQSGHLEDKAYQALI 494
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 210/349 (60%), Gaps = 4/349 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ + E+FF LP+ + ALL++YV+N+ +AE+L+++M ++ LP
Sbjct: 149 AKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREKAESLIDEMRGKDYVTHALP 208
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN M+ LY++ + DKV ++ E+ +KN D+ +YN+WL++C Q + E+ F ++K
Sbjct: 209 YNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLSSCGLQGSADKMEQVFEQMK 268
Query: 142 KT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
I+P+W ++ST+ ++YIKM EKA L+ +E R ++R+ Y LLSLY N+G K
Sbjct: 269 SDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRVESRITGRDRIPYHYLLSLYGNVGNK 328
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+EV R+W S+F + + Y +ISSLV++ + E AE IY+EW SI + DPR+ N+
Sbjct: 329 EEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKIYEEWLSIKTSYDPRIANLF 388
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS-- 318
+AA++ + L+ AESF++ ++ +G KP +WE+L G++ + + + L C K+A +
Sbjct: 389 MAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWEILAQGHISERRTSEALSCLKEAFATPG 448
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
+ W P+ +++ + EE+ D+ E L LR +GH+ + Y LL
Sbjct: 449 SKSWKPNPANVSSFFKLCEEEVDMASKEALASFLRQSGHLKDKAYALLL 497
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 208/381 (54%), Gaps = 7/381 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A EN+F +LP+ + T ALL+ Y + + +AEALME+M E +PYN ++ L
Sbjct: 107 AAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTL 166
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y GQ +K+P ++QELK + PD TYN+W+ A A+ ND E+ E+K+ ++
Sbjct: 167 YTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVAS 226
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS L S+Y+ + EKA LKE+EKR ++ A+ L++LY +G EV R+W
Sbjct: 227 DWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVW 286
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K + Y +I LV L + AE + EWES D RV N L+ AY
Sbjct: 287 RSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKD 346
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSVRKWV 323
LE AE +G KP TWE+ +LK +M++ ++C AI G +KWV
Sbjct: 347 GLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWV 406
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRN-AGHVSTEIYNSLLRTYAKAGKMPLIIVE 382
P +I E++ D+DGAE L L++ + E++ SL+R YA AG+ ++
Sbjct: 407 PSPEIIGVFMQHFEQEKDVDGAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRR 466
Query: 383 RMQKDNVQMDAETQKVLKITS 403
R++ +NV++ +K+L+ S
Sbjct: 467 RLKMENVEVSDSCKKLLEEVS 487
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 211/388 (54%), Gaps = 7/388 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+A A EN+F +LP+ + ALL+ Y + + ++E LMEKM E +P
Sbjct: 101 AKARGITAAENYFVSLPEPSKNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMP 160
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ LY GQ +K+P ++QE+K N D TYN+W+ A A+ ND E+ E+K
Sbjct: 161 YNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMK 220
Query: 142 KT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ ++ DW +YS L S+++ L +KA LKE+EKR K+ AY L++LY G
Sbjct: 221 RGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEKRNAFKDLTAYQFLITLYGRTGNL 280
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
EV R+W+ + F K + Y +I LV L + AE + EWE T D RV N+L
Sbjct: 281 YEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVL 340
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---- 316
+ AY+ + LE AE R +G KP T E+ YL KG + ++ +AI
Sbjct: 341 IRAYVKLDMLEKAEELKERARRRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGR 400
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
G+ KWVP R+I+ E++ D+DGAE L L+ + E++ SL+RTYA AG+
Sbjct: 401 GNGEKWVPSSRIISIMMRHFEQEKDVDGAEEFLEILKKSVESPGVEVFESLIRTYAAAGR 460
Query: 376 MPLIIVERMQKDNVQMDAETQKVLKITS 403
+ + R++ +NV++ TQK+L+ S
Sbjct: 461 ISSAMQRRLKMENVEVSEGTQKLLEAIS 488
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 200/340 (58%), Gaps = 4/340 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FF LP+ + +LL++YV+ K +AEAL+ M + G+ PLP+N M+ LY+
Sbjct: 156 EEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYM 215
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDW 149
+ + DKV M+ E+K K+ D+ +YN+WL++C S E E + ++K I P+W
Sbjct: 216 NLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNW 275
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++ST+ ++YIKM EKA L+++E R +NR+ Y LLSLY ++G K E+ R+W
Sbjct: 276 TTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHV 335
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S+ + + Y ++SSLV++G+ E AE +Y+EW + + DPR+PN+L+ AY+ +Q
Sbjct: 336 YKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQ 395
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS--VRKWVPDHR 327
LE AE ++ +V G KP +TWE+L G+ +K + + L C + A + W P
Sbjct: 396 LETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVL 455
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
+++ + EE+ D+ E +L LR +G + + Y +L+
Sbjct: 456 MLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALI 495
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 200/340 (58%), Gaps = 4/340 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FF LP+ + +LL++YV+ K +AEAL+ M + G+ PLP+N M+ LY+
Sbjct: 156 EEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYM 215
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDW 149
+ + DKV M+ E+K K+ D+ +YN+WL++C S E E + ++K I P+W
Sbjct: 216 NLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNW 275
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++ST+ ++YIKM EKA L+++E R +NR+ Y LLSLY ++G K E+ R+W
Sbjct: 276 TTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHV 335
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S+ + + Y ++SSLV++G+ E AE +Y+EW + + DPR+PN+L+ AY+ +Q
Sbjct: 336 YKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQ 395
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS--VRKWVPDHR 327
LE AE ++ +V G KP +TWE+L G+ +K + + L C + A + W P
Sbjct: 396 LETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVL 455
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
+++ + EE+ D+ E +L LR +G + + Y +L+
Sbjct: 456 MLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALI 495
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 201/350 (57%), Gaps = 9/350 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ + E++F LPD ++ ALL++YVQ K +AE L+EK+ G+ PLP
Sbjct: 138 AKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPLP 197
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N M+ LY++ +LDKV M+ E+ KN D+ +YN+WL++C S E E+ F ++K
Sbjct: 198 FNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCEST---ERMEQVFEQMK 254
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ I+P+W ++ST+ ++YIK+ EKA LK++E R ++R+ Y L+SLY + G K
Sbjct: 255 LERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGSTGNK 314
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
EV R W S F + + Y +ISSLV++G+ E AE IY+EW S+ + DPR+ N+L
Sbjct: 315 AEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLL 374
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---G 317
L Y+ LE AE F + ++ G KP TTWE+L G ++ L CFK+A+ G
Sbjct: 375 LGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDALSCFKRAVLAEG 434
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
S W P ++A + EE+ D E L+ LR G + E Y SL
Sbjct: 435 S-NGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLEDEPYASLF 483
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 201/350 (57%), Gaps = 9/350 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ + E++F LPD ++ ALL++YVQ K +AE L+EK+ G+ PLP
Sbjct: 347 AKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPLP 406
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N M+ LY++ +LDKV M+ E+ KN D+ +YN+WL++C S E E+ F ++K
Sbjct: 407 FNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCEST---ERMEQVFEQMK 463
Query: 142 KTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ I+P+W ++ST+ ++YIK+ EKA LK++E R ++R+ Y L+SLY + G K
Sbjct: 464 LERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGSTGNK 523
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
EV R W S F + + Y +ISSLV++G+ E AE IY+EW S+ + DPR+ N+L
Sbjct: 524 AEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLL 583
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---G 317
L Y+ LE AE F + ++ G KP TTWE+L G ++ L CFK+A+ G
Sbjct: 584 LGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDALSCFKRAVLAEG 643
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
S W P ++A + EE+ D E L+ LR G + E Y SL
Sbjct: 644 S-NGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLEDEPYASLF 692
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 210/353 (59%), Gaps = 7/353 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ + L + E FF +L DK++ T ALL+ YV ++ +AE+L + M G++
Sbjct: 160 IAKVRGLSSA--EAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIH 217
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
LP+N M+ LY++ + KV + E+ +KN D+ TYN+WL++C SQ E E+ F
Sbjct: 218 ALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFE 277
Query: 139 ELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+++K I P+W ++ST+ S+YI+M+ EKA L+++E R ++R+ + LLSLY ++
Sbjct: 278 QMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKVEGRIKGRDRIPFHYLLSLYGSV 337
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G KDEV R+W S+F + + Y +ISSLVKL + E AE +Y+EW S+ + DPR+
Sbjct: 338 GKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKLYEEWISVKSSYDPRIG 397
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
N+L+ Y+ + + A SF+ +++ G P TWE+L+ G++ ++ + + C K+A
Sbjct: 398 NLLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNTWEILSEGHIADKRISEAMSCLKEAFM 457
Query: 317 --GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
G + W P ++A +EQ D++ AE L+ LR + +++Y SL+
Sbjct: 458 AAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIGLLRQSKFNKSKVYASLI 510
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 216/379 (56%), Gaps = 6/379 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F NLPD C LL YV+++ +++AE M K+ E G + P P+N M+ LY+
Sbjct: 118 EEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPHPFNEMMKLYL 177
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETA--EKAFLE-LKKTKIDP 147
+ KVP ++Q++K+N P +V++YNLW+ AC+ + A E F + L ++
Sbjct: 178 VTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGYVVAAVETVFRQMLNDRNVEV 237
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W S +TL + Y K +KA LK+ EK+ NR+ + L++LY ++ K+ VLR+W
Sbjct: 238 GWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGHFFLITLYASLKDKEGVLRLW 297
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ ++ +++ A Y C+++ LVKLG+ +A+ I+ EWES D RV N+LL AY+
Sbjct: 298 EASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYVRN 357
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPD 325
+E AES + + KG P Y T E+L GY+ +M++ + K+A+ ++ W P
Sbjct: 358 GLMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPP 417
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQ 385
H ++ A LE+ G+++ A+ + + N G VS +Y LLR + A K P I++ M
Sbjct: 418 HGIVLAIAEYLEKDGNLEYADKYITDIHNLGLVSLSLYKVLLRMHLSANKPPFHILKMMD 477
Query: 386 KDNVQMDAETQKVLKITSE 404
+D V++D ET +LK +E
Sbjct: 478 EDKVEIDNETLSILKAFTE 496
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 200/347 (57%), Gaps = 4/347 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F+ LPD M+ T +LL+ Y Q + E E+M + GF LP N ++N Y+
Sbjct: 168 EKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEDTFEQMRKKGFASDTLPCNVLMNFYV 227
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+G+ ++V ++ E+K +N S DV TYN+W+ +CA++ D E E+ F ++ + +W
Sbjct: 228 DSGEPNEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMERVFSQMIADESVVANW 287
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S+YIK+ EKA LK+ EKRT + + + L++LY+++G K+EV RIW
Sbjct: 288 TTYTTLASMYIKLGNSEKAEECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNW 347
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y ++S+LV++G+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 348 YKATFPMIHNLGYQELLSALVRIGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAKEGL 407
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L Y+K ++ + L C +K AI S KW P
Sbjct: 408 ITKAEQTLNRFVEKGGNPKPNTWEILATAYMKDDKISEALSCMEKATAIKSANKWKPRPT 467
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+ + +E+ D +GA+ L+ L + G E Y SL+ TYA AG
Sbjct: 468 NVESLLASFKEKNDAEGADRLVSVLTSRGCAEDEEYKSLINTYAFAG 514
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 205/350 (58%), Gaps = 5/350 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ + E FF +L DK++ T ALL+ YV ++ +AE+L + M G++ LP
Sbjct: 160 AKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIHALP 219
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
N M+ LY++ + KV + E+ +KN D+ TYN+WL++C SQ E E+ F +++
Sbjct: 220 INVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFEQME 279
Query: 142 KT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ I P+W ++STL S+YI+M EKA L+++E R ++R+ + LLSLY ++G K
Sbjct: 280 RDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRKVEGRIKGRDRIPFHYLLSLYGSVGKK 339
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
DEV R+W S+F ++ + Y +ISSLVKL + E AE +Y+EW S+ + DPR+ N+L
Sbjct: 340 DEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAEKLYEEWISVKSSYDPRIGNLL 399
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---G 317
+ Y+ ++ + A SF+ ++ G P TWE+L+ G++ ++ + L C K+A G
Sbjct: 400 MGWYVKKDDTDKALSFFEQISNDGCIPNSNTWEILSEGHIADKRISEALSCLKEAFMVAG 459
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
+ W P ++A +EQ D++ AE L+ LR + ++Y S++
Sbjct: 460 GSKSWRPKPSYLSAFLELCQEQNDMESAEVLIGLLRQSKFSKIKVYASII 509
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 214/385 (55%), Gaps = 6/385 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F NLPD C LL Y++ + + +AE M K+ E G + P P+N M+ LY+
Sbjct: 143 EEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVLSPHPFNEMMKLYL 202
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETA--EKAFLELKKTK-IDP 147
+ + KVP ++Q++K+N P +V++YNLW+ AC + A E F +++ + ++
Sbjct: 203 ATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNACTEEEGYGVAAVETVFRQMQNDRNVEV 262
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W S +TL + Y K +KA LK+ E++ NR+ Y L++LY ++ K+ VLR+W
Sbjct: 263 GWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGYFFLITLYASLKEKEGVLRLW 322
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ ++ +++ A Y C++ LVKLG+ +A+ I+ EWES D RV N+LL AY
Sbjct: 323 EASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYARN 382
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPD 325
+E AES + + KG P Y T E+L GY+ +M++ + K+A+ ++ W P
Sbjct: 383 GSMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPP 442
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQ 385
H L+ A LE+ G++ A + LRN G S +Y LLR + A K P I++ M
Sbjct: 443 HGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSLSLYKILLRMHLSANKPPFHILKMMD 502
Query: 386 KDNVQMDAETQKVLKITSEMPVSEV 410
+D ++MD ET +LK + +EV
Sbjct: 503 EDKIEMDNETLSILKAFTGCVQAEV 527
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 216/375 (57%), Gaps = 6/375 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++F+NL ++ R T ALL+ YV+ ++ M+KM E GF PL YN ++ LY
Sbjct: 123 ESYFQNLVNQDRNDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNYNDLMCLYT 182
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
GQL+KV +L E+K+N +PD+ +Y + +++CA+++D + E+ E++ ++ I DW
Sbjct: 183 RTGQLEKVTDVLSEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMENQSHISIDW 242
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++YST+ S+Y+K L EKA LK+ E++ R + + Y+ L+SL ++G KDEV+R+W
Sbjct: 243 VTYSTVASIYVKASLKEKALIYLKKCEQKVNR-DALGYNHLISLNASLGIKDEVMRLWGL 301
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + K + +Y ++ +LVKL E E+A+ + EWES D RVPN+LL Y +
Sbjct: 302 VKTKCKKQVNRDYITMLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGYCQQGL 361
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---GSVRKWVPDH 326
+E AE+ +V K P +W ++ GY+ K MEK C K+A+ + W P
Sbjct: 362 IEKAEAMLKDIVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKA 421
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
LI++ + L E GD++ E + L EIY++L++ Y + GK ++E M
Sbjct: 422 NLISSILSWLGENGDVEDVEAFVNLLETKVPKDREIYHTLIKAYIRGGKQVDGVLENMTA 481
Query: 387 DNVQMDAETQKVLKI 401
+ + D ET+ +L +
Sbjct: 482 NKIDEDEETKTILSL 496
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 209/350 (59%), Gaps = 6/350 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ + E++F L D ++ ALL+SYV+ + +AE+L+EKM + + LP
Sbjct: 149 AKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMREKAESLIEKMRKKDYTTHALP 208
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N M+ LY++ + DKV M+ E+ KN D+ +YN+WL++ SQ E E+ + ++K
Sbjct: 209 FNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWLSSRGSQGSIERMEEVYEQMK 268
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ I+P+W ++ST+ ++YIKM EKA L+ +E R ++R+ Y LLSLY N+G K
Sbjct: 269 LDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVESRITGRDRIPYHYLLSLYGNVGNK 328
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+E+ R+W S+FA + + Y +ISSLV++ + E AE IY+EW + + DPR+ N+L
Sbjct: 329 EEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGAEKIYEEWLPVKSSYDPRIGNLL 388
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---G 317
+ Y+ L+ AESF++ ++ G KP +TWE+L G+ ++ ++ + L CFK+A G
Sbjct: 389 MGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILADGHTREKRISEALSCFKEAFLAQG 448
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
S + W P +I++ + EE+ D+ L L +G++ + Y SL+
Sbjct: 449 S-KSWKPKPVIISSFFKLCEEEADMASTGVLEDLLAQSGYLEDKTYASLI 497
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 197/340 (57%), Gaps = 9/340 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ + E++F LPD ++ ALL++YVQ K +AE L+EK+ G+ PLP
Sbjct: 72 AKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPLP 131
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N M+ LY++ +LDKV M+ E+ KN D+ +YN+WL++C S E E+ F ++K
Sbjct: 132 FNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCEST---ERMEQVFEQMK 188
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ I+P+W ++ST+ ++YIK+ EKA LK++E R ++R+ Y L+SLY + G K
Sbjct: 189 LERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGSTGNK 248
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
EV R W S F + + Y +ISSLV++G+ E AE IY+EW S+ + DPR+ N+L
Sbjct: 249 AEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLL 308
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---G 317
L Y+ LE AE F + ++ G KP TTWE+L G ++ L CFK+A+ G
Sbjct: 309 LGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDALSCFKRAVLAEG 368
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
S W P ++A + EE+ D E L+ LR G+
Sbjct: 369 S-NGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGY 407
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 224/387 (57%), Gaps = 8/387 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+ Q + L++ EN+F N+ + + ALL+ YV+ + ++ + ++KM E GF
Sbjct: 115 IGQVRGLESA--ENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFAST 172
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFL 138
PLPYN ++ LYI+ QL+K+P +L E+++N SPD +Y L + + +++D + EK
Sbjct: 173 PLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILE 232
Query: 139 ELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++ K+ I DW++YS + + YIK L EKA LK+ E + K+ + Y+ L+SLY ++
Sbjct: 233 EMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETK-LHKDPLGYNHLISLYASL 291
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G K E++R+W++ + K+ + +Y ++ SLVKLGE E E + EWES D RVP
Sbjct: 292 GSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVP 351
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N LL + + +E AES +V +G P +W ++ GY++K MEK EC K+AI
Sbjct: 352 NTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIA 411
Query: 318 SV---RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+ + W P ++I++ + L + D++ E + L+ + E+Y++ +R +AG
Sbjct: 412 VLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAG 471
Query: 375 KMPLIIVERMQKDNVQMDAETQKVLKI 401
K I++ M+ D + D ET+K+L +
Sbjct: 472 KEVDGILDSMKADKIDEDEETRKILSL 498
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 226/392 (57%), Gaps = 18/392 (4%)
Query: 20 VAQAQALQTRARENFFENLP-----DKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSEC 74
+ Q + L++ EN+F N+ DKM G ALL+ YV+ + ++ + ++KM E
Sbjct: 115 IGQVRGLESA--ENYFNNMSAEEKIDKMYG-----ALLNCYVRERVIDKSLSHLQKMKEL 167
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETA 133
GF PLPYN ++ LYI+ QL+K+P +L E+++N SPD +Y L + + +++D +
Sbjct: 168 GFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSM 227
Query: 134 EKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
EK E++ K+ I DW++YS + + YIK L EKA LK+ E + K+ + Y+ L+S
Sbjct: 228 EKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETK-LHKDPLGYNHLIS 286
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
LY ++G K E++R+W++ + K+ + +Y ++ SLVKLGE E E + EWES
Sbjct: 287 LYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCY 346
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D RVPN LL + + +E AES +V +G P +W ++ GY++K MEK EC
Sbjct: 347 DFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECM 406
Query: 313 KKAIGSV---RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
K+AI + + W P ++I++ + L + D++ E + L+ + E+Y++ +R
Sbjct: 407 KEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRA 466
Query: 370 YAKAGKMPLIIVERMQKDNVQMDAETQKVLKI 401
+AGK I++ M+ D + D ET+K+L +
Sbjct: 467 SIRAGKEVDGILDSMKADKIDEDEETRKILSL 498
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 198/344 (57%), Gaps = 4/344 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE LPD ++ T +LL+ Y Q + E+ E+M + GF LP+N ++N Y+
Sbjct: 164 EEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYV 223
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ +KV ++ E+ ++N + DV TYN+W+ +CA+ D + E+ F ++ + + +W
Sbjct: 224 DAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANW 283
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+ EKA +LKE EKRT + + + L++LY+++G K+EV R+W
Sbjct: 284 TTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNW 343
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 344 YKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGF 403
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L YLK GQ + L C +K A+ S KW P
Sbjct: 404 VTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPT 463
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYA 371
+ + +E+ D + A+ L+ LR+ E Y SL+ TYA
Sbjct: 464 NVESLLANFKEKNDAESADRLMNVLRSRRCEENEEYKSLINTYA 507
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 198/344 (57%), Gaps = 4/344 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE LPD ++ T +LL+ Y Q + E+ E+M + GF LP+N ++N Y+
Sbjct: 184 EEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYV 243
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ +KV ++ E+ ++N + DV TYN+W+ +CA+ D + E+ F ++ + + +W
Sbjct: 244 DAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANW 303
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+ EKA +LKE EKRT + + + L++LY+++G K+EV R+W
Sbjct: 304 TTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNW 363
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 364 YKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGF 423
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L YLK GQ + L C +K A+ S KW P
Sbjct: 424 VTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPT 483
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYA 371
+ + +E+ D + A+ L+ LR+ E Y SL+ TYA
Sbjct: 484 NVESLLANFKEKNDAESADRLMNVLRSRRCEENEEYKSLINTYA 527
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 198/347 (57%), Gaps = 4/347 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F+ LPD M+ T +LL+ Y Q + E E+M + GF LP N ++N Y+
Sbjct: 166 EKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEETFEQMRKKGFASDTLPCNVLMNFYV 225
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+G+ D+V ++ E+K +N S DV TYN+W+ +CA++ D E E+ F ++ + +W
Sbjct: 226 DSGEPDEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMEQVFSQMIADESVVANW 285
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S+Y+K+ EKA LK+ EKRT + + + L++LY+++G K+EV RIW
Sbjct: 286 TTYTTLASMYLKLGNSEKAEECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNW 345
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y ++S+L+++G+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 346 YKATFPMIHNLGYQELLSALIRIGDIEGAELLYEEWASKSYSFDPKTMNILLAWYAKEGL 405
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L Y+ ++ + L C +K A+ S KW P
Sbjct: 406 ITKAEQTVNRFVEKGGNPKPNTWEILATAYMNDDKISEALSCMEKATAVKSASKWKPRPT 465
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+ +E+ D +GA+ L+ L + G E Y SL+ TYA AG
Sbjct: 466 NVETLLASFKEKNDAEGADRLVSVLTSRGCAEDEEYKSLIDTYAFAG 512
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 206/343 (60%), Gaps = 4/343 (1%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
++ E +F LP+ ++ ALL++Y + ++ +AE L+EKM GF PLP+N M+
Sbjct: 156 KSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMT 215
Query: 89 LYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-ID 146
LY++ + +KV ++ E+ +N+ D+ +YN+WL++C Q E E+ + ++K+ + I+
Sbjct: 216 LYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTIN 275
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
+W ++ST+ ++YIKM L EKA L+ +E R ++R+ Y L+SLY ++G K+E+ R+
Sbjct: 276 ANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRV 335
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W ++F + + Y +IS+L+++G+ E AE IY+EW ++ T DPR+ N+ + Y+
Sbjct: 336 WNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVK 395
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS--VRKWVP 324
AESF++ +V G KP +TWE+L + K+G++ L +K+A + + W P
Sbjct: 396 EGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRP 455
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
+ A ++ E++GDI E L+ LR ++ + Y SL+
Sbjct: 456 KPYNVLAYFDLCEKEGDIASKEVLVGLLRQPKYLQDKTYASLI 498
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 205/376 (54%), Gaps = 6/376 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+FE +P LLH YV+ + ++AE+ M K+S G L P PYN M+ LY++
Sbjct: 136 YFERIPGSGSKKAASLPLLHGYVKERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMAL 195
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDWIS 151
Q +KVP ++ E+K+N +V++YNLW+ A + AE + E+ + W +
Sbjct: 196 SQYEKVPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWST 255
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++L ++YIK +KA LK+ E + R+ Y L++LY+++ K+ VLR+W+
Sbjct: 256 LASLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASK 315
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
++ ++ A+Y CVIS LVK+G+ AE ++ EWE+ D RV N+LL AY+ +
Sbjct: 316 AVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMG 375
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR----KWVPDHR 327
AESF+ V +G P Y TWE+L G++K +M+K ++ KK ++ W P H
Sbjct: 376 KAESFHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHS 435
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
++ A E+ G+ + A H + + G + +Y LR Y A + I++ M+KD
Sbjct: 436 ILMAIAEHFEKHGNFEDANHYIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKD 495
Query: 388 NVQMDAETQKVLKITS 403
+++D ET ++ + S
Sbjct: 496 RIELDDETSALVALNS 511
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 197/343 (57%), Gaps = 4/343 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE LPD ++ T +LL+ Y Q + E+ E+M + GF LP+N ++N Y+
Sbjct: 164 EEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYV 223
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ +KV ++ E+ ++N + DV TYN+W+ +CA+ D + E+ F ++ + + +W
Sbjct: 224 DAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANW 283
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+ EKA +LKE EKRT + + + L++LY+++G K+EV R+W
Sbjct: 284 TTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNW 343
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 344 YKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGF 403
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L YLK GQ + L C +K A+ S KW P
Sbjct: 404 VTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPT 463
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTY 370
+ + +E+ D + A+ L+ LR+ E Y SL+ TY
Sbjct: 464 NVESLLANFKEKNDAESADRLMNVLRSRRCEENEEYKSLINTY 506
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 195/343 (56%), Gaps = 4/343 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL +YV+NK EAEALMEK++ GFL P P+N M+ LY ++GQ +KV ++ +K N
Sbjct: 149 LLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNK 208
Query: 111 SP-DVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKA 168
P +V++YNLW+ AC + E + E+ K ++ W S TL ++YIK EKA
Sbjct: 209 IPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKA 268
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L++ EK R NR+ Y L++LY ++G K+ V+R+W+ S+ +++ Y CV+SS
Sbjct: 269 RLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSS 328
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
LVK G+ E+AE ++ EWE+ D RV N+LL AY+ ++ AES + ++ +G P
Sbjct: 329 LVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPN 388
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAE 346
Y TWE+L G++K MEK ++ + +R+ W P H ++ A E++ I+ A
Sbjct: 389 YKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEAT 448
Query: 347 HLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
+ L G S +Y LLR + A + I E M+ D +
Sbjct: 449 AYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 4/346 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE LPD ++ T +LL+ Y Q + + E E+M + GF LP+N ++N Y+
Sbjct: 156 EEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYV 215
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDW 149
+ +KV + E+K +N S DV TYN+W+ CA+ D + E+ ++ + + +W
Sbjct: 216 DVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANW 275
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+E EKA LKE EKR +++ + L++LY+++ K+EV RIW
Sbjct: 276 TTYTTLASMHIKLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWNW 335
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 336 YKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGF 395
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ A+ NR V KG P TWE+L YLK Q+ + L C +K A+ S KW P
Sbjct: 396 VVKAQQTLNRFVEKGGNPKPNTWEILATAYLKDNQLSEALSCLEKATAVKSASKWRPRPT 455
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKA 373
+ +E+ D + + L+ LR+ G E Y SL+ TYA A
Sbjct: 456 NVETLLAYFKEKNDTESVDRLMSVLRSRGCAENEEYKSLIDTYALA 501
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 4/346 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE LPD ++ T +LL+ Y Q + + E E+M + GF LP+N ++N Y+
Sbjct: 156 EEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYV 215
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDW 149
+ +KV + E+K +N S DV TYN+W+ CA+ D + E+ ++ + + +W
Sbjct: 216 DVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANW 275
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+E EKA LKE EKR +++ + L++LY+++ K+EV RIW
Sbjct: 276 TTYTTLASMHIKLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWNW 335
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 336 YKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGF 395
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ A+ NR V KG P TWE+L YLK Q+ + L C +K A+ S KW P
Sbjct: 396 VVKAQQTLNRFVEKGGNPKPNTWEILATAYLKDNQLSEALSCLEKATAVKSASKWRPRPT 455
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKA 373
+ +E+ D + + L+ LR+ G E Y SL+ TYA A
Sbjct: 456 NVETLLAYFKEKNDTESVDRLMSVLRSRGCAENEEYKSLIDTYALA 501
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 213/375 (56%), Gaps = 5/375 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F NL D+ + T ALL+ YVQ +++ ++ + ++KM E GF K L YN ++ LY
Sbjct: 117 ENYFNNLRDQDKNEKTYGALLNCYVQKRETDKSISHLQKMKEMGFAKSSLSYNDIMCLYT 176
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
+ GQ +KVPQ+L E+K+N SPD +Y L + + ++ D E EK E++ + I DW
Sbjct: 177 NVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNSYGARGDLEGMEKMLNEMEHQPDIVVDW 236
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
SY+ S YIK L +KA +LK+ E R +K+ Y+ L+SLY +G K EVLR+W
Sbjct: 237 NSYAVAASSYIKGGLTDKAIDSLKKSETRLDKKDGTGYNHLISLYATLGEKTEVLRLWDL 296
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S + + +Y +++SLVKL EFE+ E + EWE+ D RVPN L+ Y +
Sbjct: 297 EKSTCERPINKDYINIMASLVKLDEFEEVEKVLKEWEASGNFYDVRVPNTLIIGYSGKGL 356
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---GSVRKWVPDH 326
E A++ L KG W + G+ K ++ K C K A+ ++W P+
Sbjct: 357 YEKAKALLENLTEKGKATLPNIWGKVAAGFFDKNEVAKAFSCMKAALCLYEENKEWKPNQ 416
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
++IT + L ++G + AE + +L+N ++ E+Y+++L+ + +AGK +++ M+
Sbjct: 417 KVITGILSWLGDEGSAEDAEAFVSSLKNVIPMNREMYHAVLKAHIRAGKEVHGLLDGMKT 476
Query: 387 DNVQMDAETQKVLKI 401
++ D ET+K+L +
Sbjct: 477 CKIKEDEETKKILSM 491
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 195/347 (56%), Gaps = 4/347 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE+LPD ++ T +LL+ Y Q + + E E+M + G+ LP+N ++N Y+
Sbjct: 166 EEYFESLPDPLKDKRTYGSLLNVYAQARMKEKTEDTFEQMRKKGYASDTLPFNVLMNFYV 225
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ KV + E+K +N S DV TYN+W+ + A+ D + ++ F ++ + +W
Sbjct: 226 DVEEPQKVSAVTDEMKERNVSFDVCTYNIWIKSFAAMKDADGMDRVFNQMIADESVVANW 285
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+ EKA LKE EKRT +++ + L++LY+ + K+EV RIW
Sbjct: 286 TTYTTLASMHIKLGNFEKAEVCLKEAEKRTTGRDKKCFHFLITLYSYLQKKEEVYRIWNW 345
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F+ +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 346 YKATFSTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGF 405
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L YLK Q+ + L C +K A+ S +W P
Sbjct: 406 VVKAEQTLNRFVEKGGNPKPNTWEILASAYLKDNQLSEALSCMEKAAAVKSASRWRPRPS 465
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+ + +E D D A+ L+ L + G E Y SL+ TYA AG
Sbjct: 466 NVESLLAYFKENNDTDSADRLMGVLTSRGCAENEEYKSLINTYALAG 512
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 190/327 (58%), Gaps = 4/327 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE LPD ++ T +LL+ Y Q + E+ E+M + GF LP+N ++N Y+
Sbjct: 164 EEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYV 223
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ +KV ++ E+ ++N + DV TYN+W+ +CA+ D + E+ F ++ + + +W
Sbjct: 224 DAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANW 283
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+ EKA +LKE EKRT + + + L++LY+++G K+EV R+W
Sbjct: 284 TTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNW 343
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 344 YKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGF 403
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L YLK GQ + L C +K A+ S KW P
Sbjct: 404 VTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPT 463
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRN 354
+ + +E+ D + A+ L+ LR+
Sbjct: 464 NVESLLANFKEKNDAESADRLMNVLRS 490
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 212/375 (56%), Gaps = 5/375 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F NL D+ + T ALL+ YV+ +++ ++ ++KM E GF K L YN ++ LY
Sbjct: 117 ENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIMCLYT 176
Query: 92 SNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
+ GQ +KVPQ+L E+K+N PD +Y L + + +++D E EK E++ + I DW
Sbjct: 177 NVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDW 236
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+ + YI +L +KA TLK+ E R +K+ Y+ L+SLY +G K EVLR+W
Sbjct: 237 NTYAVAANFYIIGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNKTEVLRLWDL 296
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S + + +Y ++ SL+KL EFE+AE + EWES D RVPN L+ Y +
Sbjct: 297 EKSACERHINKDYIIMMESLLKLSEFEEAEKMLKEWESSGNFYDVRVPNTLIIGYSRKGL 356
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRKWVPDH 326
E A++ L KG +W ++ G+ K ++ K C K A+ + W P+
Sbjct: 357 CEKAKALLENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYVENKGWKPNQ 416
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
R+I + L ++G + AE + +L+ V+ E+Y+++L+ +AGK +++ M+
Sbjct: 417 RVINGILSWLGDEGSAEDAEAFVSSLKTVIPVNREMYHAVLKANIRAGKEVHRLLDGMKT 476
Query: 387 DNVQMDAETQKVLKI 401
N++ D ET+K+L++
Sbjct: 477 YNIKEDEETKKILRM 491
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 223/401 (55%), Gaps = 24/401 (5%)
Query: 2 ERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKS 61
ER R + V Q +A+ + + E+FF NL + ++ T ALL++YV ++
Sbjct: 306 ERFRISASDVAIQ--LDLIARVHGVSSA--ESFFLNLTNDLKDKRTYGALLNAYVHSRSR 361
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLW 120
+AE+L+E M +L LP+N M+ L ++ DKV ++ E+K KN D+ TYN+W
Sbjct: 362 EKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQLDIYTYNIW 421
Query: 121 LAACASQNDKETAEKAFLE-LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
L++C SQ E E+ F + LK I P+W ++ST+ ++YIKMEL EKA LK+ E R
Sbjct: 422 LSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQECLKKAEGRI 481
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
+++V + LLSLY ++G KDEV R+W S+F + + Y VISS V++ + E+AE
Sbjct: 482 LGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSFVRMDDIERAE 541
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
+Y+EW S+ + D R+ N+L++ Y+ + + + SF+ + G P TTWELL+ G+
Sbjct: 542 KLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNSTTWELLSEGH 601
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS 359
+ + ++ + L C +KA +T+ + + + + AE L+ LR +G+ +
Sbjct: 602 IAEKRVSEALSCLEKA------------FMTSDSKSWKPKANKNCAEVLIELLRKSGYHN 649
Query: 360 TEIYNSLLRTYAKAGKMPLIIVERMQK-DNVQMDAETQKVL 399
E Y +++ + + ER+ D+ MD + +VL
Sbjct: 650 DEAYAAIISKDEPSNR-----TERIDDVDSENMDDDDSQVL 685
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 211/373 (56%), Gaps = 5/373 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F+ L D+ + T ALL+ YV+ +++ +A + ++KM + GF PL YN ++ LY
Sbjct: 109 ETYFDALKDQHKTNKTYGALLNCYVRQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYT 168
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
+ GQ +KVP +L+E+K+N PD +Y + + + ++D E+ E++ + I DW
Sbjct: 169 NIGQHEKVPDVLREMKQNQVLPDNFSYRICINSYGVRSDFGGVERVLKEMETQPNIVMDW 228
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS + YIK L A L++ E+R K+ Y+ L+SLY +G K+EV+RIW
Sbjct: 229 NTYSIAANFYIKAGLTRDAVCALRKSEERLDNKDGQGYNHLISLYAQLGLKNEVMRIWDL 288
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + ++T ++ SLVKLGE ++AE I EWES D +P+I++ Y +
Sbjct: 289 EKNACKRCINRDFTTLLESLVKLGELDEAEKILKEWESSDNCYDFGIPSIVIIGYSQKGL 348
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRKWVPDH 326
E A + L K W ++ GY+ KG+MEK +CFK A+ + W P+
Sbjct: 349 HEKALAMLEELQNKEKVTTPNCWSIVAGGYIHKGEMEKAFKCFKTALSLYVENKGWKPNA 408
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
++I + + G ++ AE L+ LRNA V+ ++Y++L++TY + GK ++ RM+K
Sbjct: 409 KVIAELLRWIGDNGSVEDAEVLVSLLRNAVPVNRQMYHTLIKTYIRGGKEVDDLLGRMEK 468
Query: 387 DNVQMDAETQKVL 399
D + + ET+K++
Sbjct: 469 DGIDENKETKKII 481
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 215/373 (57%), Gaps = 5/373 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++F +L + + T ALL+ YV+ +++ ++ + ++KM E GF PL YN ++ LY
Sbjct: 127 ESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYT 186
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ GQ +KVP +L E+K+ + PD +Y + + + A+Q+D + EK E+ ++ I DW
Sbjct: 187 NVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDW 246
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+ + YIK LP+KA LK+ E+R +++ + Y+ L+SLY ++G K EVLR+W
Sbjct: 247 NTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSL 306
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S + + +Y ++ SLV+LGE E+AE + EWES D RVPNI++ Y +
Sbjct: 307 EKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGL 366
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRKWVPDH 326
E AE+ L+ KG +W + GY+ +G+MEK +EC K AI + + P+
Sbjct: 367 FEKAEAMLKELMEKGKITTPDSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNS 426
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
R+I + L ++G ++ E + +LR ++ +Y++L+ +AGK ++ M+
Sbjct: 427 RVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKA 486
Query: 387 DNVQMDAETQKVL 399
D + D ET+K+L
Sbjct: 487 DKIVEDEETKKIL 499
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 213/373 (57%), Gaps = 5/373 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++F +L + + T ALL+ YV+ +++ ++ + ++KM E GF PL YN ++ LY
Sbjct: 127 ESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYT 186
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ GQ +KVP +L E+K+ N PD +Y + + + +Q+D + E E+ ++ I DW
Sbjct: 187 NVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDW 246
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+ + YIK LP+KA LK+ E+R +++ + Y+ L+SLY ++G K EVLR+W
Sbjct: 247 NTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSL 306
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S + + +Y ++ SLV+LGE E+AE + EWES D RVPNI++ Y +
Sbjct: 307 EKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGL 366
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRKWVPDH 326
E AE+ L+ KG +W + GY+ +G+MEK +EC K AI + + P+
Sbjct: 367 FEKAEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNS 426
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
R+I + L ++G ++ E + +LR ++ +Y++L+ +AGK ++ M+
Sbjct: 427 RVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKA 486
Query: 387 DNVQMDAETQKVL 399
D + D ET+K+L
Sbjct: 487 DKIVEDEETKKIL 499
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 187/322 (58%), Gaps = 4/322 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE LPD ++ T +LL+ Y Q + E+ E+M + GF LP+N ++N Y+
Sbjct: 164 EEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYV 223
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ +KV ++ E+ ++N + DV TYN+W+ +CA+ D + E+ F ++ + + +W
Sbjct: 224 DAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANW 283
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S++IK+ EKA +LKE EKRT + + + L++LY+++G K+EV R+W
Sbjct: 284 TTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNW 343
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F +++ Y V+S+LV+LG+ E AE +Y+EW S S + DP+ NILLA Y
Sbjct: 344 YKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGF 403
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
+ AE NR V KG P TWE+L YLK GQ + L C +K A+ S KW P
Sbjct: 404 VTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPT 463
Query: 328 LITAAYNKLEEQGDIDGAEHLL 349
+ + +E+ D + A+ L+
Sbjct: 464 NVESLLANFKEKNDAESADRLM 485
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 213/376 (56%), Gaps = 5/376 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F NL D + T ALL+ YV+ +++ + + +KM E G PL YN ++ LYI
Sbjct: 102 ENYFNNLMDHDKTDKTYGALLNCYVRQRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYI 161
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
+ G +KV +L E+K+N SPD +Y + + + +++D + EK E++ + DW
Sbjct: 162 NLGLYEKVLHVLTEMKENKISPDNFSYRICINSYGARSDIQGMEKVLNEMECRLGNAMDW 221
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+ + + YIK L +KA L++ E++ +K+ + Y+ L+SLY +G K EVLRIW
Sbjct: 222 NTYAVVANFYIKAGLADKAVDALRKSEEKLDKKDGIGYNHLISLYATLGIKSEVLRIWDL 281
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S+ + + ++ ++ SLVKLG+ E+AE + EWES D R+PNI++ Y
Sbjct: 282 QKSVCKRRINRDFVTMLESLVKLGDLEEAEKVLKEWESSGNFYDVRIPNIVVVGYSKNGL 341
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRK--WVPDH 326
E AE+ L+ KG +W ++ GYL+KG+ K EC K A +V K W P+
Sbjct: 342 HEKAEASLEALMEKGRATTPNSWAMIASGYLEKGEKAKAFECMKAAFSLNVEKKGWKPNP 401
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
R++ L ++G + E + +L A ++ +IY++LL+ ++G+ I++RM+
Sbjct: 402 RVVMDILIWLGDEGSPEDVEAFVASLSVAIPLNRQIYHALLKAKIRSGRDAHEILDRMKT 461
Query: 387 DNVQMDAETQKVLKIT 402
D + D ET+++L I+
Sbjct: 462 DKIDEDEETKEILGIS 477
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 208/373 (55%), Gaps = 6/373 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FE + DK++ + ALL YV+ +AEA++++M E G PYN M+NLY
Sbjct: 136 EMYFEKISDKLKSGNVYGALLSGYVRENSVQKAEAVLQEMREKGIATSSFPYNIMINLYA 195
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
NG +K+ + +E+++N P D T +AA + +D E+ +L+ ++ W
Sbjct: 196 QNGAFEKIDILKEEMERNGIPQDKYTMRNLMAAYVAASDISGMERILNQLETHPQLGHGW 255
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS S Y+K+ L EKA L++ME+ K A++ LL+LY G KDE+ R+W
Sbjct: 256 QAYSVAASGYLKVGLIEKALKMLRKMEETMPIGKKTSAFNYLLTLYAKTGRKDELYRVWN 315
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
L A++ + ++ C+ISSL K+ + E AE I++EWES D RV N LL AY R
Sbjct: 316 SYKPL-AEVKETQFCCMISSLEKVDDIEGAERIFEEWESQCMMYDFRVLNKLLLAYC-RK 373
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHR 327
L + +G P +TW + Y+ + QM K +E KKAI RK W P+
Sbjct: 374 GLYTKAEAAFKKAAEGRTPYASTWITMAMSYIGQNQMSKAVEMLKKAISVSRKGWKPNPI 433
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
+T + LEEQGD++G E ++ +L++ ++ +IY+ L+RTY AG ++++M+ D
Sbjct: 434 TLTTCLDYLEEQGDVEGIEEIVKSLKSTESLTRDIYHRLVRTYTAAGIPVTKVIDKMKMD 493
Query: 388 NVQMDAETQKVLK 400
N+ D ET K+L+
Sbjct: 494 NIAADEETHKILE 506
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 210/373 (56%), Gaps = 6/373 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + ++L D + ALL+ YV+ ++ +LM+KM + GF+ L YN++++LY
Sbjct: 119 ERYLQSLSDGDKTWKVHGALLNCYVREGLVDKSLSLMQKMKDMGFVSF-LNYNNIMSLYT 177
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDW 149
Q +KVP +L+++KK+ P++ +Y + + + + D EK E+++ I DW
Sbjct: 178 QTQQYEKVPGVLEQMKKDGVPPNIFSYRICINSYCVRGDLANVEKLLEEMEREPHIGIDW 237
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+YS +T+ YIK ++ EKA L + EK+T R N VAY+ L+S + K ++R WK
Sbjct: 238 ITYSMVTNFYIKADMREKALVCLMKCEKKTHRGNTVAYNHLISHNAALRSKGGMMRAWKL 297
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ K + EY ++ LVKLGE +KAE + EWE T D RVPNILL Y R
Sbjct: 298 QKANCKKQLNREYITMLGCLVKLGELDKAEKVLGEWELSGNTCDFRVPNILLIGYCQRGL 357
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---GSVRKWVPDH 326
+E AE+ ++V +G P +W ++ GY+ K MEK +C K+A+ ++W P
Sbjct: 358 VEKAEALLRKMVAEGKTPIPNSWSIVASGYVAKENMEKAFQCMKEAVAVHAQNKRWRPKV 417
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
+I++ ++ + DI+ AE + + ++ ++ +Y SL++ + GK I+E M+
Sbjct: 418 DVISSIFSWVTNNRDIEEAEDFVNSWKSVNAMNRGMYLSLMKMCIRYGKHVDGILESMKA 477
Query: 387 DNVQMDAETQKVL 399
DN+++D E ++ L
Sbjct: 478 DNIEIDEEIKETL 490
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 198/382 (51%), Gaps = 6/382 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ T E ++ LP+ LLH YV + +AE+ M + G P
Sbjct: 126 AKVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPHS 185
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLEL- 140
+N M+ LY++ + +KV ++ +K+N P + ++YNLW+ AC S +D + + F E+
Sbjct: 186 FNEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLWMNAC-SVSDVTSVQSVFKEMV 244
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
I+ W +Y TL ++++K L KA L+ E + R+ YS +++ Y +G
Sbjct: 245 NDGTIEVGWSTYCTLANIFMKHGLNSKAFACLRTAETKLSTAQRLGYSFVMTCYAALGDS 304
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D V+R+W+ + ++ A Y I L+K+G+ ++AE I+ WE D RV N+L
Sbjct: 305 DGVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRAEWIFGSWEVECRKHDVRVSNVL 364
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L AY+ +E AE + ++ KG +P Y TWE+L G+++ QM+K + KKA+ ++
Sbjct: 365 LGAYVRNGWIEKAEKLHLHMLEKGGRPNYKTWEILMEGFVQSRQMDKAVNAMKKALSLMK 424
Query: 321 --KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM-P 377
W P RL+ A EEQG+ D A + L+ S +Y S+LR Y KA M P
Sbjct: 425 GCHWRPPLRLVEAIATFFEEQGNTDDANRYIKVLQKFNLTSLPLYKSVLRAYIKADTMLP 484
Query: 378 LIIVERMQKDNVQMDAETQKVL 399
I E + +D++ MD E ++
Sbjct: 485 TNISEMIARDDIVMDEEMDHLI 506
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 193/340 (56%), Gaps = 13/340 (3%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+++A+ L+ E +F ++ + R ALLH YV+NK +AEA+M+KM E GF+K
Sbjct: 114 ISKARGLEQA--EKYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKT 171
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFL 138
PL YN MLNLY G+ +K+ ++L+E+++ PD TYN+ + A A+ +D EK
Sbjct: 172 PLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAASDITNMEKL-- 229
Query: 139 ELKKTKIDP----DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR-VAYSSLLSL 193
L K + DP DW +Y + + Y K L E + LK+ E+ K + +AY L++L
Sbjct: 230 -LSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKWLAYQYLMTL 288
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
Y +G KDEV R+W +L + N Y C+ISSL+KL + + AE I EWES + D
Sbjct: 289 YAAIGNKDEVYRVWNLYTNLRKRFNSG-YLCIISSLMKLDDIDGAERILKEWESGDTSFD 347
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
R+PN+++ +Y + ++ AE++ NRL+ G +P TW+LL GY G KV E K
Sbjct: 348 FRIPNMMINSYCMKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGLTNKVAETLK 407
Query: 314 KAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
KAI S W P + ++ A L+ ++D AE ++ L
Sbjct: 408 KAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEIIGLL 447
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 182/313 (58%), Gaps = 3/313 (0%)
Query: 10 QVRAQSYRQRVAQAQALQTRAR-ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALM 68
Q+ A + R+ +Q+ A E +FE+LP+ C LLH+YV+ + +AEALM
Sbjct: 103 QMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALM 162
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQ 127
K+++ G P P+N M+ LY++ Q ++VP ++ ++K+N P +V++YNLW++AC+
Sbjct: 163 LKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEV 222
Query: 128 NDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ +AE + ++ K ++ W + STL ++Y+K L +KA LK EK+ NR+
Sbjct: 223 SGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLG 282
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y L+++Y ++ K+EVLR+W+ + ++ Y C++ LVKLG+ +AE I+ EWE
Sbjct: 283 YFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWE 342
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S D RV N+LL AY+ ++ AES + + +G P Y TWE+L G++K M+
Sbjct: 343 SKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMD 402
Query: 307 KVLECFKKAIGSV 319
K + KK +
Sbjct: 403 KAINAMKKGFSII 415
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 197/390 (50%), Gaps = 4/390 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+A T E ++ L LLH YV + +AE M ++ CG P
Sbjct: 135 AKAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCGLPVDPHS 194
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLE-L 140
+N ++ LYI+ Q +K ++ +K+N P +V++YNLW+ CA + + F E L
Sbjct: 195 FNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQSVFQEML 254
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
++ W +Y TL +++ K L KA L++ E + R+ YS +++ Y +
Sbjct: 255 NDETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETKLSPTGRLGYSFVMTCYAALNDS 314
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D V+R+W+ S+ ++ A Y + +K+G+ +AE I+ WE+ D RV N+L
Sbjct: 315 DGVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQAEWIFGSWEAGCRKHDVRVSNVL 374
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L AY+ +E AE + ++ KG +P Y TWE+L GY++ QM+K + C KK + ++
Sbjct: 375 LGAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLK 434
Query: 321 K--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
W P L+ A EEQG D A + L+ S +Y SL+R Y A +P
Sbjct: 435 SCHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRAYINADIVPP 494
Query: 379 IIVERMQKDNVQMDAETQKVLKITSEMPVS 408
I+E + KD + D E +++ + S++ ++
Sbjct: 495 NILEMIAKDQIVTDEEMDRLIILASKIDIT 524
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 193/346 (55%), Gaps = 4/346 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL SYV+ K E E MEK++ GFL P P+N M+ LY ++GQ +KV ++ +K N
Sbjct: 146 LLRSYVKKKMVKEGEVFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNK 205
Query: 111 SP-DVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKA 168
P +V++YNLW+ AC + E + E+ K ++ W S TL ++YIK EKA
Sbjct: 206 IPRNVLSYNLWMNACCQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKA 265
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L+ EK R NR+ Y L++LY ++G K+ V+R+W+ + +++ A Y CV+SS
Sbjct: 266 KLVLENAEKLLNRSNRLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSS 325
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
LVK+G+ E+AE +++EWE+ D RV N+LL AY+ ++ AES + R++ +G P
Sbjct: 326 LVKIGDLEEAERVFNEWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPN 385
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHRLITAAYNKLEEQGDIDGAE 346
Y TWE+L G++K MEK + +A ++ W P ++ A EE+ I+ A
Sbjct: 386 YKTWEILMEGWVKCQSMEKAIVAMHRAFELMKGCHWRPSESIVMAIAKYFEEEEKIEEAN 445
Query: 347 HLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMD 392
+ L + G S +Y LLR A + I E M+ D + +D
Sbjct: 446 TYIRDLHHLGLASLPLYRLLLRMQEHAQRPAFDIYEMMKLDKIGID 491
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 205/383 (53%), Gaps = 12/383 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F L + P T +LL+SY + S +A L +KM + F + LP+N+++++Y+
Sbjct: 131 ENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQKMDKLKFFRNSLPFNNLMSMYM 190
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT---KIDP 147
GQ +KVP+++ ++K+ N P TYN+W+ + D E +K E++ +
Sbjct: 191 RLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMRDFEGIKKVLEEMRNDVNFGNNF 250
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+W +YS L ++Y E+A LK ME+R +R AY LL+LY + +EV R+W
Sbjct: 251 NWTTYSNLAAVYTSAGEFERAKLALKMMEERIDSHDRNAYHFLLTLYGGIADLEEVHRVW 310
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F ++ +A Y ++ +L +L + E +++EWES+ + D RV N+ + Y+ +
Sbjct: 311 GCLKAKFNQVTNASYLVMLQALARLKDVEGISKVFEEWESVCTSYDMRVANVAIRVYLEK 370
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--------GSV 319
AE+ ++ + + P + T E+L LK+ Q+E L+ K A G
Sbjct: 371 GMYNEAEAVFDGAMERTPGPYFKTREMLMVSLLKRRQLEPALKQMKAAFTEVGQNEKGHE 430
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI 379
++W P ++ A + EE+ D++GAE + L+ + +Y L++TY AGK +
Sbjct: 431 KEWRPSAEIVNAFFGYFEEEKDVEGAEKMWKILKCINRCDSTVYRLLMKTYIAAGKSAVD 490
Query: 380 IVERMQKDNVQMDAETQKVLKIT 402
+ R+ +D V++D E Q++L +
Sbjct: 491 MRTRLAEDAVEVDEEIQRLLDVV 513
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 206/369 (55%), Gaps = 12/369 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E+FF+ +PD RG ++LL Y ++K EAEA+M+K+ E + + YN +L LY
Sbjct: 122 EDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEAEAIMKKIKELRPMHLTVCYNILLKLYA 181
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP---- 147
G+ +K+ +++QE+K+N + T+ + L A + D E EK ++++ DP
Sbjct: 182 QKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQMEA---DPMATV 238
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRI 206
DW +YST + Y+K EKA LK+ E+ +K R+AY SL S Y +G KDEV R+
Sbjct: 239 DWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRL 298
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W ++ +L N + Y C++SSL+KL +F+ AE I EWES D R+PN+++ AY
Sbjct: 299 WNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCK 357
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR-KWVPD 325
R L+ AE++ +L+ G K ++W+ + GY MEK ++ KKAI + R W P
Sbjct: 358 RGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPS 417
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQ 385
+ A L+E+ D++ A +L + GH+ Y+ L+ +YA G++P +
Sbjct: 418 PSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLV-SYAH-GEIPDKEALDLM 475
Query: 386 KDNVQMDAE 394
K + QMD +
Sbjct: 476 KRDYQMDGK 484
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 208/378 (55%), Gaps = 9/378 (2%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F P+ +R ALL+ Y Q K +AEA+M++M + GF+K L YN ML LY
Sbjct: 123 EKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVKT-LSYNVMLGLYS 181
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
G+ +K+ ++QE+++N D TY + L A + +D E EK ++L+ ++ DW
Sbjct: 182 RLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDW 241
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y + Y+K +L EKA LK+ E+ + R R Y LL+LY MG K EV RIW
Sbjct: 242 NAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEVYRIWN 301
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ K + Y ++SSL+KL + + AE ++EW S + D RVPN+L+ AY +
Sbjct: 302 -LYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKG 360
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSVRKWVPDHR 327
LE AE +R + +G +P TW+ L GY + QMEK ++ KKA + + + W P+
Sbjct: 361 LLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPV 420
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNS-LLRTYAKAGKMPLIIVERMQK 386
++A L+ +GD++ AE+L+ LR VS Y+S L Y ++ + + +M
Sbjct: 421 TLSACLEYLKGKGDVEEAENLIRLLREQSLVSA--YDSDRLVNYIRSEEPGSSTIAQMLW 478
Query: 387 DNVQMDAETQKVLKITSE 404
D+ +DAET V+ + E
Sbjct: 479 DHEDLDAETDGVVDLKQE 496
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 200/374 (53%), Gaps = 5/374 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F +L + + T ALL+ Y + +A L +K+ E F+ L YN+M++LY+
Sbjct: 116 ENYFNSLQESAKTNKTYGALLNCYCKENMVDKAVELFKKLKELNFVSSALSYNNMISLYL 175
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
GQ +KVP ++ E+++ P D+ TYNL + + AS D E E+ ++KK ++ DW
Sbjct: 176 RVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLEKMKKRGVERDWF 235
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y L ++Y+ +KA L+++E+ + A+ L++LY + V R W+ +
Sbjct: 236 TYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESL 295
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
K+N+ Y ++ +L KLG+ E + EWES T D R+ N++L +Y+NR +
Sbjct: 296 KLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREMI 355
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF----KKAIGSVRKWVPDH 326
E A + +G + T +L YLKK Q++ ++ KA KW P
Sbjct: 356 EEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTE 415
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
IT EE D+D AE T+R + ++IY+SLLRTY AGK ++ ERM+
Sbjct: 416 ETITMFLEYFEEVKDVDSAEKFCETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKD 475
Query: 387 DNVQMDAETQKVLK 400
D +++ +ET+K+L+
Sbjct: 476 DGIEISSETEKLLQ 489
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 199/370 (53%), Gaps = 5/370 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F+++PD+++ +LL Y + K +AE L EKM G + YN M+ LY+ +
Sbjct: 172 YFDSMPDQLKQQQCYGSLLKCYAEAKCVEKAEELFEKMRGMG-MASSYAYNVMMRLYLQD 230
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ+++V M + ++++ DV T + +AA D E EK + W SY
Sbjct: 231 GQVERVHSMHRTMEESGIVADVFTTDTLVAAYVVAEDIEAIEKVLEKADTCNDLMTWHSY 290
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRK-NRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+T+ + ++ + E+A +E EK+ +K NRVAY LL++Y ++G EV RIW
Sbjct: 291 ATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVDRIWDVYK 350
Query: 212 S-LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S + A ++ Y C IS L+K+ + AE Y+EWES D R+ N+LL AY +
Sbjct: 351 SKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTAYCKEGLM 410
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRLI 329
E AE+ ++ V KG P TW L GY K GQ K + KKA+ S +W PD +
Sbjct: 411 EKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALASGSNEWTPDLTNV 470
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
+ N EQ +++ AE + L+ + +IY+ LL+TY AGK +++RM+KD +
Sbjct: 471 LMSLNYFAEQKNVEAAEEMASLLQRLITPTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGM 530
Query: 390 QMDAETQKVL 399
+ D ET+K+L
Sbjct: 531 EADEETEKIL 540
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 204/394 (51%), Gaps = 12/394 (3%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSA----LLHSYVQNKKSAEAEALMEKMSECGFLK 78
A+A T E ++ +K++ P T A LLH YV + +AE M ++ G
Sbjct: 133 AKAYSTSQAEEYY----NKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHGLPV 188
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAF 137
P +N ++ LY++ Q +KV ++ +K+N +V++YNLW+ ACA + ++ + F
Sbjct: 189 DPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVF 248
Query: 138 -LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ L + W +Y TL +++ K L +A L + E + R+ YS +++ Y
Sbjct: 249 QVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMTCYAA 308
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
+ D V+R+W+ S+ ++ A Y +S +K+G+ +AE I+ +WE+ D RV
Sbjct: 309 LNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHDVRV 368
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
N+LL AY+ +E AE + ++ KG P Y TWE+L GY++ QM+K + C KK +
Sbjct: 369 SNVLLGAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMKKGL 428
Query: 317 GSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
++ W P L+ A EEQG D A + L+ S +Y SL+R Y A
Sbjct: 429 SLLKSCHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRAYINAD 488
Query: 375 KMPLIIVERMQKDNVQMDAETQKVLKITSEMPVS 408
+P ++E + KD + MD E +++ I ++ ++
Sbjct: 489 VVPPNVLEMIAKDQIDMDEEMDRLIIIAGKIDIT 522
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 175/322 (54%), Gaps = 6/322 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A EN+F +LP+ + + ALL+ Y + +AEALMEKM E G + YN ++ L
Sbjct: 38 AAENYFIDLPESSKNIECYGALLNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTL 97
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y G +KVP ++QE+K + TYN+W+ A A+ D E+ E+K+ ++
Sbjct: 98 YSKTGLPEKVPALVQEMKASDIMLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAE 157
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS L S+Y++ ++ EKA LKE+EKR ++ Y LL+LY G EV R+W
Sbjct: 158 DWTTYSNLASIYVESKMFEKAENALKELEKRNTSQDLSPYQFLLTLYGKTGNLIEVYRVW 217
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K + Y +I LV L + + AE + +WES D R+ N+L+ AYI
Sbjct: 218 RSLRLAFPKTPNVAYLNMIQRLVTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKD 277
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSVRKWV 323
L+ A+ R +G KP TWE+ YLK G+++ ++C ++A+ G KWV
Sbjct: 278 GLLQQAKELKKRACKRGAKPNAKTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWV 337
Query: 324 PDHRLITAAYNKLEEQGDIDGA 345
P +++ + E+ D+DGA
Sbjct: 338 PSSKVVNSIMGHFEQSKDVDGA 359
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 204/378 (53%), Gaps = 6/378 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FENL ++ + T ALL+ YV+ + ++ EKM E GF+ L YN+++ LY
Sbjct: 113 EEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYT 172
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ GQ +KVP++L+E+K+ N +PD +Y + + A + D E ++ ++ I DW
Sbjct: 173 NIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDW 232
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+ YI ++A LK E R +K+ Y+ L++LY +G K EVLR+W
Sbjct: 233 NTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDL 292
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + +Y V+ SLVK+ +AE + EW+S D RVPN ++ YI ++
Sbjct: 293 EKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSM 352
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRKWVPDH 326
E AE+ L +G +WEL+ Y +KG +E +C K A+G RKW P
Sbjct: 353 EEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGL 412
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL-IIVERMQ 385
L+T+ + + ++G + E + +LRN V+ ++Y++L++ + G + +++RM+
Sbjct: 413 TLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMK 472
Query: 386 KDNVQMDAETQKVLKITS 403
D +++D ET +L S
Sbjct: 473 DDKIEIDEETTVILSTRS 490
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 200/374 (53%), Gaps = 5/374 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F +L + + T ALL+ Y + +A L +K+ E F+ L YN+M++LY+
Sbjct: 120 ENYFNSLQESAKTNKTYGALLNCYCKENMLDKAVELFKKLKELNFVSSALSYNNMISLYL 179
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
GQ +KVP ++ E+++ P D+ TYNL + + AS D E E+ ++KK ++ DW
Sbjct: 180 RVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKMKKRGVERDWF 239
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y L ++Y+ +KA L+++E+ + A+ L++LY + V R W+ +
Sbjct: 240 TYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESL 299
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
K+N+ Y ++ +L KLG+ E + EWES T D R+ N++L +Y+NR +
Sbjct: 300 KLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREII 359
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF----KKAIGSVRKWVPDH 326
E A + +G + T +L YLKK Q++ ++ KA KW P
Sbjct: 360 EEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTE 419
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
IT EE D+D AE T+R + ++IY+SLLRTY AGK ++ ERM+
Sbjct: 420 ETITMFLEYFEEVKDVDSAEKFCETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKD 479
Query: 387 DNVQMDAETQKVLK 400
D +++ +ET+K+L+
Sbjct: 480 DGIEISSETEKLLQ 493
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 206/361 (57%), Gaps = 8/361 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+ + L++ E++F+NL +K + T ALL+ YV+ ++ + ++KM E GF
Sbjct: 78 IGKVHGLESA--ESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKSLSHVQKMKELGFFST 135
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFL 138
L YN ++ LY++ G L+KVP +L ++K+N SPD+ +Y + L + ++D + EK
Sbjct: 136 ALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKSYGERSDFDNVEKILR 195
Query: 139 ELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++ ++ I DW +++T+ ++Y++ L EKA LK+ E++ KN + Y+ L+SLY ++
Sbjct: 196 EMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEKV-NKNALGYNHLISLYASL 254
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G KDE++R+W+ + K + +Y ++ SLVKLG E+AE + +WES D RVP
Sbjct: 255 GNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLLQDWESSCQYYDFRVP 314
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N++L Y + E AE+ ++ K ++W +++ GY+ K MEK EC K+A+
Sbjct: 315 NVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMDKQNMEKAFECMKEALA 374
Query: 318 SVRK---WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+ + W P +I+ N L + D E + L S E+Y++L+++Y + G
Sbjct: 375 AETENNGWRPKPAMISNILNWLGDNRDAQEVEAFVGLLETKVPKSREMYHALIKSYIRCG 434
Query: 375 K 375
K
Sbjct: 435 K 435
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 187/376 (49%), Gaps = 42/376 (11%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A EN+F +LP+ + T ALL+ Y + + +AEALME+M E +PYN ++ L
Sbjct: 107 AAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTL 166
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y GQ +K+P ++QELK + PD TYN+W+ A A+ ND E+ E+K+ ++
Sbjct: 167 YTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVAS 226
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS L S+Y+ + EKA LKE+EKR ++ A+ L++LY +G EV R+W
Sbjct: 227 DWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVW 286
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K + Y +I LV L + AE + EWES D RV N L+ AY
Sbjct: 287 RSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKD 346
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
LE AE +G KP TWE+ +LK +M++ ++C AI +
Sbjct: 347 GLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAIST--------- 397
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
E++ SL+R YA AG+ ++ R++ +
Sbjct: 398 -------------------------------GVEVFESLIRIYAAAGRTSPVMRRRLKME 426
Query: 388 NVQMDAETQKVLKITS 403
NV++ +K+L+ S
Sbjct: 427 NVEVSDSCKKLLEEVS 442
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 211/380 (55%), Gaps = 6/380 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F +L D R T ALL+ YV+ ++ ++ + ++KM E GF L YN+++ L
Sbjct: 114 AAETYFNSLKDIERNEKTHGALLNCYVRQRQVDKSLSHLKKMKELGFALSSLTYNNIMCL 173
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDP 147
Y + GQ +KV + E+K+N PD +Y + + + ++D + E++ + I
Sbjct: 174 YTNIGQHEKVSDVFNEMKENHVLPDNFSYRICIGSYGVRSDIDGMNAILKEMESQPHIVM 233
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS + + YIK EL +A L++ EKR K+ Y+ L+SLY +G K+EVLR+W
Sbjct: 234 DWNTYSVVANFYIKAELSSEAIDALRKCEKRLDDKDGEGYNHLISLYARLGKKNEVLRLW 293
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
S + + ++ ++ SLVKL EF++A+ I EWE D VPN+++ Y +
Sbjct: 294 DMEKSACKRCLNRDFITMLESLVKLEEFDEADKILKEWEFSGNCYDYGVPNVVVVGYSEK 353
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRKWVP 324
+ E AE+ + K ++W L+ YL KG+MEK LEC K A+ +K P
Sbjct: 354 DFPEKAEAILQDIWKKRKYTDTSSWILVADRYLLKGEMEKALECLKTAVCLYPENKKRKP 413
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERM 384
+HR+I++ Y+ + + ++ AE LV L + +Y+SLL+ Y +A K +++RM
Sbjct: 414 NHRVISSIYSWIGDNASVEDAE-ALVRLLKKFQKNRHMYHSLLKAYVRADKEVDGVLDRM 472
Query: 385 QKDNVQMDAETQKVLKITSE 404
++DN+ +T +++K+ E
Sbjct: 473 KEDNIDETGKTAEIVKMKKE 492
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 173/322 (53%), Gaps = 6/322 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A EN+F +LP+ + + ALL+ Y + +AEALMEKM E G + YN ++ L
Sbjct: 38 AAENYFIDLPESSKNIECYGALLNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTL 97
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y G +KVP ++QE+K + TYN+W+ A A+ D E+ E+K+ ++
Sbjct: 98 YSKTGLPEKVPALVQEMKASDIMLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAE 157
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS L S+Y++ ++ +KA LKE+EKR + Y LL+LY G EV R+W
Sbjct: 158 DWTTYSNLASIYVESKMFDKAENALKELEKRNTSRELSPYQFLLTLYGKTGNLIEVYRLW 217
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K + Y +I LV L + + AE + +WES D R+ N+L+ AYI
Sbjct: 218 RSLRLAFPKTPNVAYLNMIQRLVTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKD 277
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSVRKWV 323
L+ A+ R +G KP TWE+ YLK G+++ ++C ++A+ G KWV
Sbjct: 278 GSLQQAKELKKRACKRGAKPNAKTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWV 337
Query: 324 PDHRLITAAYNKLEEQGDIDGA 345
P ++ + E+ D+DGA
Sbjct: 338 PSTNVVNSIMGHFEQSKDVDGA 359
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 206/378 (54%), Gaps = 9/378 (2%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F P+ +R ALL+ Y Q K +AEA+M++M + GF+K L YN ML LY
Sbjct: 123 EKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVKT-LSYNVMLGLYS 181
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
G+ +K+ ++QE+++N D TY + L A + +D E EK ++L+ ++ DW
Sbjct: 182 RLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDW 241
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y + Y+K +L EKA LK+ E+ + R R Y LL+LY MG K E RIW
Sbjct: 242 NAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEXYRIWN 301
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ K + Y ++SSL+KL + + AE ++EW S + D RVPN+L+ AY +
Sbjct: 302 -LYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKG 360
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSVRKWVPDHR 327
LE AE +R + +G +P TW+ L GY + QMEK ++ KKA + + + W P+
Sbjct: 361 LLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPV 420
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNS-LLRTYAKAGKMPLIIVERMQK 386
++A L+ + D++ AE+L+ LR VS Y+S L Y ++ + + +M
Sbjct: 421 TLSACLEYLKGKXDVEEAENLIRLLREQSLVSA--YDSDRLVNYIRSEEPGSSTIAQMLW 478
Query: 387 DNVQMDAETQKVLKITSE 404
D+ +DAET V+ + E
Sbjct: 479 DHEDLDAETDGVVDLKQE 496
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 185/354 (52%), Gaps = 6/354 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LLH YV + +AE+ M + G P +N ML LY++ Q +K ++ +K++
Sbjct: 149 LLHCYVAERNVQKAESFMASLQSIGLPVDPHSFNEMLKLYVATCQFEKALAVIDLMKRSN 208
Query: 111 SP-DVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDWISYSTLTSLYIKMELPEKA 168
P +V++YNLW+ AC S + + F E+ ++ W ++ TL +++IK L KA
Sbjct: 209 IPRNVLSYNLWMNAC-SVLGVASVQSVFKEMVNDGTVEVGWSTFCTLANIFIKHGLNSKA 267
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L+ E + + R+ YS +++ Y + D V+R+W+ S+ ++ A Y I
Sbjct: 268 LACLRTAETKLSPRQRLGYSFVMTCYARLDDSDGVMRLWEASKSVPGRIPSANYMSTIIC 327
Query: 229 LVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+K+G+ +AE I+ WE+ G D RV N+LL AY+ +E AE + ++ KG P
Sbjct: 328 SIKVGDIAQAEWIFGSWEAECGRKNDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 387
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGA 345
Y TWE+L G+++ QM+K + KKA+ + W P L+ A EE G++D A
Sbjct: 388 NYKTWEILLEGFVQSRQMDKAVNAIKKALSLSKSCHWRPPLELVEAIATFFEEHGNVDDA 447
Query: 346 EHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
+ L+ S +Y S+LR Y KA +P I E + +D + MD E +++
Sbjct: 448 NRYIKVLQKFNLTSLPLYKSVLRAYIKADAVPPNISEMIARDQIIMDEEMDRLI 501
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 199/373 (53%), Gaps = 7/373 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F ++ +++ + ALL YV+ K +AEA+M++M + G YN ++NLY
Sbjct: 124 ENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMGIATTSFAYNVLINLYA 183
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDW 149
GQ DK+ +++E+K P D+ + AA ++ D EK +++ +++ DW
Sbjct: 184 QIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGMEKILKRIEEDSELKADW 243
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
YS + Y+ L +A + LK+ E++ N+ A+ LLSLY G+K+EV R+W
Sbjct: 244 TIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLSLYERTGHKNEVYRVWN 303
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
L K Y +I+SL KL + E AE I+ EWES D RV N LL AY +
Sbjct: 304 TFKPL-TKETCVPYALMITSLAKLDDIEGAERIFQEWESKCTVYDFRVLNRLLVAYCRKG 362
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDH- 326
L+ AES N+ V + P +TW +L GY + G M K +E KKAI R+ W P
Sbjct: 363 LLDKAESVVNQAVVER-TPFRSTWSILATGYAEYGHMSKAVEMLKKAILVGRQNWKPKQG 421
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
++ A + LE+QGD + + ++ +++G V E+Y LLRT GK + I+E+M+
Sbjct: 422 DILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYRLLRTSIAGGKPVISILEQMKM 481
Query: 387 DNVQMDAETQKVL 399
D D E K+L
Sbjct: 482 DGFAADEEVDKIL 494
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 193/340 (56%), Gaps = 13/340 (3%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+++A+ L+ E +F ++ + R ALLH YV+NK +AEA+M+KM E GF+K
Sbjct: 114 ISKARGLEQA--EEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKT 171
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFL 138
PL YN MLNLY G+ +K+ ++++E+++ + TYN+ + A A+ +D EK
Sbjct: 172 PLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNMEKL-- 229
Query: 139 ELKKTKIDP----DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR-VAYSSLLSL 193
L K + DP DW Y T+ + Y K L E + + LK+ E+ K + +AY L++L
Sbjct: 230 -LSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQLIGDKQKWLAYQYLMTL 288
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
Y +G KDEV R+W +L + N Y C+ISSL+KL + + AE I EWES + D
Sbjct: 289 YAAIGNKDEVYRVWNLYTNLQKRFNSG-YLCIISSLMKLDDIDGAERILKEWESGDTSFD 347
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
++PN+++ +Y + ++ AE++ +RL+ G +P W+ L GY G K E K
Sbjct: 348 FKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAETLK 407
Query: 314 KAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
KAI S +W P++ ++ A L+ G+++ AE ++ L
Sbjct: 408 KAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEIIGLL 447
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 198/371 (53%), Gaps = 7/371 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F+ +P+++R +LL Y + ++ +AE L E M G + YN M+NLY
Sbjct: 140 YFDAVPNQLRELQCYGSLLRCYTEAERVEKAEELFENMRGMG-MANSYAYNAMMNLYSQI 198
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ+++V M + +++ PD+ T + ++A A D E EK LE W S+
Sbjct: 199 GQVERVHSMYKSMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKV-LEKASCNNLMSWHSF 257
Query: 153 STLTSLYIKMELPEKAATTLKEMEKR-TCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+ + +++K + E+A +E EKR T RK+ RVAY LL++Y ++ EV RIW
Sbjct: 258 AIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVY 317
Query: 211 MS-LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S + A + Y C IS L+K+ + AE Y+EWES D R+ NILL AY
Sbjct: 318 RSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGL 377
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDHRL 328
+E AE+ ++ + KG P TW L GY K GQ K + KKA+ S +W PD
Sbjct: 378 MEKAEALVDQFIKKGRTPFSNTWYKLAGGYFKVGQASKAADLTKKALASASNEWKPDLAN 437
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDN 388
+ + N EQ +++ AE + L+ ++ ++Y+ LL+TY AG+ +++RM+KD
Sbjct: 438 VLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKDG 497
Query: 389 VQMDAETQKVL 399
++ D ET K+L
Sbjct: 498 IEADEETDKIL 508
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 201/374 (53%), Gaps = 5/374 (1%)
Query: 32 ENFFENLP-DKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
E +F +P D + ALLH YV+ K +AEALM K+ G + P+N M+ LY
Sbjct: 117 EEYFNFIPHDSVTRKAASFALLHGYVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLY 176
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPD 148
++ Q +KV ++ ++K+N + ++++YNLW+++ + E + E+ ++
Sbjct: 177 MATSQYEKVALVIDQMKRNKIALNLLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVG 236
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
W + +TL ++Y K + +KA LK EK + + Y L++ Y+++ K+ V R+W+
Sbjct: 237 WSTLATLANIYTKAGIVDKALLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWE 296
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ ++ A Y CV+S LVK+G+ +AE ++ +WE D RV N+LL AY+ +
Sbjct: 297 ACKGVNGRITCANYMCVLSCLVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKG 356
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDH 326
+ AES + + +G P Y T E+L G++K +M+K ++ +AI + W P H
Sbjct: 357 LMNKAESLHLHTLDRGGCPNYKTLEILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSH 416
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
+I + LE + + A H + + + G S +Y LLR + A + I++ M+K
Sbjct: 417 GIIMSIAEHLERNRNFEDANHFIQVIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEK 476
Query: 387 DNVQMDAETQKVLK 400
D +++D ET +++
Sbjct: 477 DKIELDDETSALVQ 490
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 214/441 (48%), Gaps = 47/441 (10%)
Query: 4 RRPHGAQVRAQSYR-QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
RR V Q+ R VA+++ + A E +F +LP+ + T ALL+ Y ++ +
Sbjct: 79 RRGMNPTVSDQAIRLDLVAKSRGIA--AAEKYFLDLPETSKTHLTYGALLNCYCKDLMTE 136
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
+AEALM KM E F + YN ++ LY Q +KVP ++Q++K + PD+ TYN+W+
Sbjct: 137 KAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWM 196
Query: 122 AACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
A A++ D + E+ E+K+ ++ PDW +YS L S+Y+ L EKA LKE+EK
Sbjct: 197 RALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNT 256
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ AY L++LY EV R+W+ + + + Y +I +L L + AE
Sbjct: 257 SNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEA 316
Query: 241 IYDEWES-----------ISGTG--------------------------DPRVPNILLAA 263
+ EWE+ GT D RV N ++ A
Sbjct: 317 CFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKA 376
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSV 319
YI + A + R +G + TWE+ YLK+G ++ V C +AI +
Sbjct: 377 YITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGHSAG 436
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPL 378
R WVP H + + E+ D+DGAE + L+ + T ++ L+RTYA AGK
Sbjct: 437 RIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGKKLP 496
Query: 379 IIVERMQKDNVQMDAETQKVL 399
+ R++ +NV++ ET K+L
Sbjct: 497 GMRHRLKIENVEVSEETAKLL 517
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 195/390 (50%), Gaps = 4/390 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ T E ++ L LLH YV + +AE M ++ G P
Sbjct: 128 AKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHS 187
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLE-L 140
+N ++ LY++ Q +KV ++ +K+N P +V++YN+W+ ACA + + + AF E L
Sbjct: 188 FNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEML 247
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
++ W +Y TL +++ K KA L+ E + R+ YS +++ Y + +
Sbjct: 248 NDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFIMTCYAALNDR 307
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D V+R+W+ + ++ A Y + L+K+G+ +AE + WE+ S D RV N+L
Sbjct: 308 DGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVL 367
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L AY+ +E AE + ++ KG P Y TWE+L G+++ QM+K + KK + ++
Sbjct: 368 LGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLK 427
Query: 321 --KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
W P L+ A EEQG ++ A+ + L+ S +Y SLL Y A +P
Sbjct: 428 TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQ 487
Query: 379 IIVERMQKDNVQMDAETQKVLKITSEMPVS 408
I + + D + MD E +++ S++ ++
Sbjct: 488 NIPQMIAGDQIDMDEEMDQLIIRASKIDIT 517
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 198/372 (53%), Gaps = 15/372 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE +P + R ALL+ Y K +AE + ++M E GFLK LPYN MLNLY+
Sbjct: 127 EKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYV 186
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
G+ V ++L+E++ T PD+ T N L A ++ +D E EK + + T + DW
Sbjct: 187 RTGKYTMVEKLLREMEDGTVKPDIFTVNTRLHAYSAVSDVEGMEKFLMRCEADTGLHLDW 246
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTC-RKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + YIK L EKA L++ E+ RK + AY L+S Y G K+EV R+W
Sbjct: 247 RTYADTANGYIKAGLTEKAIEMLRKSEQMVNPRKRKHAYEVLMSFYGAAGKKEEVYRLW- 305
Query: 209 KMMSLFAKMN---DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
SL+ +++ + Y VIS+L+K+ + E+ E I +EWE+ D R+P++L+ Y
Sbjct: 306 ---SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYC 362
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVP 324
+ +E AE N LV K +TWE L GY G+MEK +E +K+AI S W P
Sbjct: 363 KKGMMEKAEEVVNMLVQKWRVEDTSTWERLALGYKMAGEMEKAVEKWKRAIDVSKPGWRP 422
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERM 384
++ + + LE + D++ +L L GH+S Y+ LL AG + IV+ M
Sbjct: 423 HQVVLMSCVDYLEGRRDMESLRKILRLLSERGHIS---YDQLLYDMNGAG-LSWKIVDAM 478
Query: 385 QKDNVQMDAETQ 396
K + E +
Sbjct: 479 GKGRYIEEGEVR 490
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 195/390 (50%), Gaps = 4/390 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ T E ++ L LLH YV + +AE M ++ G P
Sbjct: 128 AKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHS 187
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLE-L 140
+N ++ LY++ Q +KV ++ +K+N P +V++YN+W+ ACA + + + AF E L
Sbjct: 188 FNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEML 247
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
++ W +Y TL +++ K KA L+ E + R+ YS +++ Y + +
Sbjct: 248 NDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFIMTCYAALNDR 307
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D V+R+W+ + ++ A Y + L+K+G+ +AE + WE+ S D RV N+L
Sbjct: 308 DGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVL 367
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L AY+ +E AE + ++ KG P Y TWE+L G+++ QM+K + KK + ++
Sbjct: 368 LGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLK 427
Query: 321 --KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
W P L+ A EEQG ++ A+ + L+ S +Y SLL Y A +P
Sbjct: 428 TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQ 487
Query: 379 IIVERMQKDNVQMDAETQKVLKITSEMPVS 408
I + + D + MD E +++ S++ ++
Sbjct: 488 NIPQMIAGDQIDMDEEMDQLIIRASKIDIT 517
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 195/362 (53%), Gaps = 15/362 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE +P + R ALL+ Y K +AE + ++M E GFLK LPYN MLNLY+
Sbjct: 31 EKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYV 90
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDW 149
G+ V ++L+E++ T PD+ T N L A + +D E EK + + + + DW
Sbjct: 91 RTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDW 150
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + YIK L EKA L++ E+ +K + AY L+S Y G K+EV R+W
Sbjct: 151 RTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLW- 209
Query: 209 KMMSLFAKMN---DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
SL+ +++ + Y VIS+L+K+ + E+ E I +EWE+ D R+P++L+ Y
Sbjct: 210 ---SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYC 266
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR-KWVP 324
+ +E AE N LV K +TWE L GY G+MEK +E +K+AI + W P
Sbjct: 267 KKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRP 326
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERM 384
++ + + LE Q D++G +L L GH+S Y+ LL AG + IV+ M
Sbjct: 327 HQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS---YDQLLYDMNGAG-LSWKIVDAM 382
Query: 385 QK 386
K
Sbjct: 383 GK 384
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 195/362 (53%), Gaps = 15/362 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFE +P + R ALL+ Y K +AE + ++M E GFLK LPYN MLNLY+
Sbjct: 126 EKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYV 185
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDW 149
G+ V ++L+E++ T PD+ T N L A + +D E EK + + + + DW
Sbjct: 186 RTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDW 245
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + YIK L EKA L++ E+ +K + AY L+S Y G K+EV R+W
Sbjct: 246 RTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLW- 304
Query: 209 KMMSLFAKMN---DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
SL+ +++ + Y VIS+L+K+ + E+ E I +EWE+ D R+P++L+ Y
Sbjct: 305 ---SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYC 361
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVP 324
+ +E AE N LV K +TWE L GY G+MEK +E +K+AI S W P
Sbjct: 362 KKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRP 421
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERM 384
++ + + LE Q D++G +L L GH+S Y+ LL AG + IV+ M
Sbjct: 422 HQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS---YDQLLYDMNGAG-LSWKIVDAM 477
Query: 385 QK 386
K
Sbjct: 478 GK 479
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 132/178 (74%), Gaps = 2/178 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ + L + E FFE++P++ +GP TC+ALLH+YVQ+ + +AEA++E+M++ G+L C
Sbjct: 106 VAKVRGLPSA--EKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTC 163
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
LP+NHM++LY+S+G+L+KVP+M++EL++ T PD+VTYN+WL C+ +N + AEK +
Sbjct: 164 ALPFNHMMSLYMSSGELEKVPEMIKELRRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDL 223
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+K ++ PDW+++S L S+YI L K L EMEKR RK R AYSSLL+LY ++
Sbjct: 224 MKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASL 281
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 198/371 (53%), Gaps = 7/371 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F+ +P+++R +LL Y + ++ +AE L E M G + YN M+NLY
Sbjct: 140 YFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMG-MANSYAYNAMMNLYSQI 198
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ+++V M + +++ PD+ T + ++A A D E EK LE W S+
Sbjct: 199 GQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKV-LEKASCNNLMSWHSF 257
Query: 153 STLTSLYIKMELPEKAATTLKEMEKR-TCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+ + +++K + E+A +E EKR T RK+ RVAY LL++Y ++ EV RIW
Sbjct: 258 AIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVY 317
Query: 211 MS-LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S + A + Y C IS L+K+ + AE Y+EWES D R+ NILL AY
Sbjct: 318 RSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGL 377
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDHRL 328
+E AE+ ++ + KG TW L GY K GQ+ K + KKA+ S +W PD
Sbjct: 378 MEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSKAADLTKKALASASNEWKPDLAN 437
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDN 388
+ + N EQ +++ AE + L+ ++ ++Y+ LL+TY AG+ +++RM+KD
Sbjct: 438 VLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKDG 497
Query: 389 VQMDAETQKVL 399
++ D ET K+L
Sbjct: 498 IEADEETDKIL 508
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 213/441 (48%), Gaps = 47/441 (10%)
Query: 4 RRPHGAQVRAQSYR-QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
RR V Q+ R VA+++ + A E +F +LP+ + T ALL+ Y ++ +
Sbjct: 79 RRGMNPTVSDQAIRLDLVAKSRGIA--AAEKYFLDLPETSKTHLTYGALLNCYCKDLMTE 136
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
+AEALM KM E F + YN ++ LY Q +KVP ++Q++K + PD+ TYN+W+
Sbjct: 137 KAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWM 196
Query: 122 AACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
A A++ D + E+ E+K+ ++ PDW +YS L S+Y+ L EKA LKE+EK
Sbjct: 197 RALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNT 256
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ AY L++LY EV R+W+ + + + Y +I +L L + AE
Sbjct: 257 SNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEA 316
Query: 241 IYDEWES-----------ISGTG--------------------------DPRVPNILLAA 263
+ EWE+ GT D RV N ++
Sbjct: 317 CFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKE 376
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSV 319
YI + A + R +G + TWE+ YLK+G ++ V C +AI +
Sbjct: 377 YITEGMFDQAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGHSAG 436
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPL 378
R WVP H + + E+ D+DGAE + L+ + T ++ L+RTYA AGK
Sbjct: 437 RIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGKKLP 496
Query: 379 IIVERMQKDNVQMDAETQKVL 399
+ R++ +NV++ ET K+L
Sbjct: 497 GMRHRLKIENVEVSEETAKLL 517
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 203/384 (52%), Gaps = 6/384 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTC-SALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A A E++F L + T ALL+ Y + S +A AL ++M E FL L
Sbjct: 116 GKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFLYSSL 175
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
P+N+++++Y+ GQ +KVP ++ E+KK SP TYN+W+ + ND + ++ E+
Sbjct: 176 PFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRVLREI 235
Query: 141 --KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
K + W +YS L ++Y+K + EKA + LK++E +NR AY L+S+Y G
Sbjct: 236 VNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMGFRNREAYHFLISIYAGTG 295
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+EV R+W + S F +N+ Y ++ +L KL + E + EWES D R+ N
Sbjct: 296 NSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESGCTNYDMRIAN 355
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+ + ++ + E AE ++ + + P + E +LK Q++ L+ + A
Sbjct: 356 VAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFLKIHQLDLALKHMRAAFSE 415
Query: 319 VRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
K W P + A ++ + D+DGAE L L++ +++ +Y+ LL+TY AGK+
Sbjct: 416 SEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKHINCLNSSVYSLLLKTYIAAGKL 475
Query: 377 PLIIVERMQKDNVQMDAETQKVLK 400
+ +R+++DN+++ E + +L+
Sbjct: 476 APEMRQRLEEDNIEISDELEYLLE 499
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 198/371 (53%), Gaps = 7/371 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F+ +P+++R +LL Y + ++ +AE L E M G + YN M+NLY
Sbjct: 102 YFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMG-MANSYAYNAMMNLYSQI 160
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ+++V M + +++ PD+ T + ++A A D E EK LE W S+
Sbjct: 161 GQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKV-LEKASCNNLMSWHSF 219
Query: 153 STLTSLYIKMELPEKAATTLKEMEKR-TCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+ + +++K + E+A +E EKR T RK+ RVAY LL++Y ++ EV RIW
Sbjct: 220 AIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVY 279
Query: 211 MS-LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S + A + Y C IS L+K+ + AE Y+EWES D R+ NILL AY
Sbjct: 280 RSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGL 339
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDHRL 328
+E AE+ ++ + KG TW L GY K GQ+ K + KKA+ S +W PD
Sbjct: 340 MEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSKAADLTKKALASASNEWKPDLAN 399
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDN 388
+ + N EQ +++ AE + L+ ++ ++Y+ LL+TY AG+ +++RM+KD
Sbjct: 400 VLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKDG 459
Query: 389 VQMDAETQKVL 399
++ D ET K+L
Sbjct: 460 IEADEETDKIL 470
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 214/420 (50%), Gaps = 19/420 (4%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKK 60
M++R+ + + V Y A+ + + A EN+F+NLP ++ T S LL+ Y +
Sbjct: 57 MQKRKMNFSHVDHAVYLDLTAKTKGIA--AAENYFDNLPPSVQNHVTYSTLLNCYCKELM 114
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNL 119
S +A L EKM + L +P+N+++ L++ GQ +KV ++QE+K + SP TYN+
Sbjct: 115 SEKALTLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNI 174
Query: 120 WLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME-- 176
W+ + ND E ++ E+K K + W +YS L ++Y+K L +KA + L+++E
Sbjct: 175 WMQSYGCLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQ 234
Query: 177 -----------KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KR +R AY L+SLY EV R+W + S F + Y V
Sbjct: 235 IECGRDCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNV 294
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ +L KL + E + EWES + D + N+ + A + + E A S ++ + +
Sbjct: 295 LQALAKLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTK 354
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHRLITAAYNKLEEQGDID 343
+ E+ +LK Q + L+ K A + +W PD + ++A N E+ D+D
Sbjct: 355 GLFFKAREMFMVFFLKNHQPDLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVD 414
Query: 344 GAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITS 403
GAE L + +++ Y LL+TY AG++ + +R+++DN++++ E + +L+ S
Sbjct: 415 GAERLCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERVS 474
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 202/377 (53%), Gaps = 5/377 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F +LP+ + T S+LL+ Y +++K+ + L EKM L YN++++L
Sbjct: 170 AAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKADKGLELFEKMKAMNITPSTLVYNNLMDL 229
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ Q +K+P +++++N D TY + + ND ++AEK EL+K+ P
Sbjct: 230 YLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQSYIMVNDLKSAEKFVEELEKSTPVP- 288
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
W Y+ L + Y K+ +KA LK+ E+ R A+ +LLSLY + G EV R+W+
Sbjct: 289 WSLYTVLANNYNKLAQFDKAVLALKKAEEVMDRSEISAWHNLLSLYASSGNSSEVKRVWE 348
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ S F K + Y ++S+L KL +F+ + ++ EWES D R+ N+++ AY+ ++
Sbjct: 349 SLKSAFTKCINRSYLVMLSALKKLDDFDSLQQLFQEWESTHERYDMRITNVMIEAYLAKD 408
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDH 326
+ AE+ + KG TT+ + YL+K + + L+ ++ A V+ WVP
Sbjct: 409 MTDEAEALRQTAMAKG-HSNVTTFYIFVVSYLEKSRTSEALDIWRDAEKMVKTPNWVPPK 467
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
L+T EE D+DG E L+ G + E Y +L+RTYA AG+ I R+++
Sbjct: 468 ELVTRFLKHFEEAKDVDGMEAFWEHLKKLGCLDAEAYGALIRTYAAAGRTNTSISRRIEE 527
Query: 387 DNVQMDAETQKVLKITS 403
D V++ + +++L+ S
Sbjct: 528 DRVEIGPDMEELLRGVS 544
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 201/426 (47%), Gaps = 56/426 (13%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F +LP+ + T ALL+SY + + +AE+LM KMSE F +P+N ++ +
Sbjct: 104 AAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMAKMSELNFAFTAMPFNSLMTM 163
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y Q +KVP ++Q +K + P V TYN+W+ A A+ ND E+ E+K+ ++ P
Sbjct: 164 YTKVNQPEKVPGIIQYMKADDVLPHVFTYNVWMRALAALNDIPGVERVIEEMKRDGRVAP 223
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS L S+Y+ L EKA LKE+EKR + AY L++LY EV R+W
Sbjct: 224 DWTTYSNLASIYVDAGLFEKAEAALKELEKRNTSNDVEAYQFLITLYGRTQNLVEVHRVW 283
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES-------------------- 247
+ + +M + Y +I L L + AE + EWE+
Sbjct: 284 RSLKRNNPRMANMSYLNMIQVLANLKDLPAAEACFKEWEARHIHPPKTKAKDSGADNIST 343
Query: 248 ---------------ISGTGDP--------------RVPNILLAAYINRNQLEMAESFYN 278
I TGD RV N ++ AYI L+ A +
Sbjct: 344 TDPESSSNLPNNQSGIKETGDEAAKDLQLKHPKYDIRVANAMIKAYIAEGMLDKAVAVKK 403
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC----FKKAIGSVRKWVPDHRLITAAYN 334
R G + TWE+ +LK G ++ C KK S R WVP + +
Sbjct: 404 RAKMHGGRLNAKTWEIFMEHHLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMS 463
Query: 335 KLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDA 393
EE D+DGAE + +L+ + T ++ LLRTYA AGK + +R++ +NV++
Sbjct: 464 YFEENKDVDGAEQYVESLKKVQKDLGTPVFEPLLRTYAAAGKKFPGMRQRLKIENVEVGE 523
Query: 394 ETQKVL 399
ET ++L
Sbjct: 524 ETDQLL 529
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 181/326 (55%), Gaps = 13/326 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F ++PD R ALL+ +K +AEA M+KM + GF+K L YN ML+LY
Sbjct: 127 EEYFNSIPDTSRDRQVYGALLNCCAHSKLLGKAEATMQKMKDLGFVKNSLSYNVMLSLYS 186
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD-- 148
G +K+ ++QE+++N S D +TY + L AC + +D E EK + K ++DP+
Sbjct: 187 HMGNYEKLDPLVQEMEENGISCDRITYCIRLNACVNSSDIEGMEKLLM---KMEVDPNIS 243
Query: 149 --WISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSLLSLYTNMGYKDEVLR 205
+ +Y + Y+K L +K LK E+ + R AY LL+LYT G K EV R
Sbjct: 244 VGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGNTRRFAYEFLLTLYTASGNKAEVYR 303
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
IW K + + ++ Y C+ISSL+KL + + AE I++EW+S D R+PN ++ Y
Sbjct: 304 IWNKYKEI-GRFFNSGYICMISSLLKLDDIDGAERIFEEWDSKKVLFDIRIPNSMVNVYS 362
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WV 323
+ LE AE++ N++V G +P T+W L GY GQM K +E +KAI SV K W
Sbjct: 363 RKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQMTKAVETIRKAI-SVSKPGWK 421
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLL 349
P ++A L+ QGD + E LL
Sbjct: 422 PSLLTLSACLEFLKGQGDAETLEELL 447
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 197/367 (53%), Gaps = 4/367 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F NL + T LL+ Y + K +A AL EKM E F L +N++++L++
Sbjct: 131 EEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHM 190
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP-DW 149
G+ + VP ++ E+KK + SPD TYN+ + + A ND E AE+ E+K+ D W
Sbjct: 191 RLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSW 250
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L ++Y+ L EKA LK++E+ +R+AY L+SLY + EV R+W
Sbjct: 251 TTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNS 310
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ S F K N+ Y ++ +L L + + + ++EW+S + D R+ N+ + A++ +
Sbjct: 311 LKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDM 370
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHR 327
++ AES V + P YT ++ +LK +++ L+ + A V+ +W P
Sbjct: 371 IKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPE 430
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
+ A EE+ D++GAE L+N + + Y LL+T AG+ + +RM++D
Sbjct: 431 RVLAFLKYFEEEKDVEGAEKFCKILKNISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKED 490
Query: 388 NVQMDAE 394
++++D++
Sbjct: 491 DIEVDSK 497
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 205/383 (53%), Gaps = 5/383 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ + L+ A E +F +L D ++ T +LL+ Y K+ +A+A E M + +
Sbjct: 115 IAKTKGLE--AAETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDKAKAHFENMVDLNHVSN 172
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
LP+N+++ +Y+ GQ +KVP ++ +K KN +P +TY++W+ +C S D + EK
Sbjct: 173 SLPFNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMWIQSCGSLKDLDGVEKVLD 232
Query: 139 ELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+K + + W +++ L ++YIK+ L +KA LK +E + R Y L+SLY +
Sbjct: 233 EMKAEGEGISSWDTFANLAAIYIKVGLYDKAEEALKSLENKMNPHIRDCYHFLISLYAGI 292
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
EV R+W + +N++ Y ++ +L KL + + + I+ EWES T D R+
Sbjct: 293 ANASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDGIKKIFTEWESTCWTYDMRMA 352
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N+ +++Y+ +N E AE+ +N +TK +LL LK Q + L+ F+ A+
Sbjct: 353 NVAISSYLKQNMYEEAEAVFNGAMTKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVL 412
Query: 318 SVRK-WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ K W LI++ + EE D+DGAE TL + +E Y L++TY A K
Sbjct: 413 DLDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLGSETYTLLMKTYLSAEKA 472
Query: 377 PLIIVERMQKDNVQMDAETQKVL 399
+ +R+++ +Q+D E +L
Sbjct: 473 CPDMKKRLEEQGIQVDEEQDCLL 495
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 191/347 (55%), Gaps = 5/347 (1%)
Query: 28 TRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+ A E +F NLPDK + ALL+ Y + ++ A +KM E GF+ LPYN+++
Sbjct: 148 SSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIM 207
Query: 88 NLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKI 145
LY + GQ +KVP ++ E+K N PD +Y + + + ++ D E E++ + KI
Sbjct: 208 GLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEMECEPKI 267
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
DW +Y+ + S YIK + EKA + LK+ E + K+ +Y+ L+SLY ++G K EV R
Sbjct: 268 VVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNR 327
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+W MS + + +YT +++ LVKL E E+AE + EWES D +VPN+LL Y
Sbjct: 328 LWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYR 387
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---GSVRKW 322
++ L+ AE+ + + KG P T+W ++ GY +KG K E K A+ W
Sbjct: 388 QKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVYAPNTGW 447
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
+P +I L ++GD++ E + L+ A +++++ ++L R
Sbjct: 448 IPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAVPLNSDMTDALSRA 494
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 191/347 (55%), Gaps = 5/347 (1%)
Query: 28 TRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+ A E +F NLPDK + ALL+ Y + ++ A +KM E GF+ LPYN+++
Sbjct: 27 SSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIM 86
Query: 88 NLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKI 145
LY + GQ +KVP ++ E+K N PD +Y + + + ++ D E E++ + KI
Sbjct: 87 GLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEMECEPKI 146
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
DW +Y+ + S YIK + EKA + LK+ E + K+ +Y+ L+SLY ++G K EV R
Sbjct: 147 VVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNR 206
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+W MS + + +YT +++ LVKL E E+AE + EWES D +VPN+LL Y
Sbjct: 207 LWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYR 266
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---GSVRKW 322
++ L+ AE+ + + KG P T+W ++ GY +KG K E K A+ W
Sbjct: 267 QKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVYAPNTGW 326
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
+P +I L ++GD++ E + L+ A +++++ ++L R
Sbjct: 327 IPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAVPLNSDMTDALSRA 373
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 191/347 (55%), Gaps = 5/347 (1%)
Query: 28 TRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+ A E +F NLPDK + ALL+ Y + ++ A +KM E GF+ LPYN+++
Sbjct: 133 SSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIM 192
Query: 88 NLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKI 145
LY + GQ +KVP ++ E+K N PD +Y + + + ++ D E E++ + KI
Sbjct: 193 GLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEMECEPKI 252
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
DW +Y+ + S YIK + EKA + LK+ E + K+ +Y+ L+SLY ++G K EV R
Sbjct: 253 VVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNR 312
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+W MS + + +YT +++ LVKL E E+AE + EWES D +VPN+LL Y
Sbjct: 313 LWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYR 372
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---GSVRKW 322
++ L+ AE+ + + KG P T+W ++ GY +KG K E K A+ W
Sbjct: 373 QKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVYAPNTGW 432
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
+P +I L ++GD++ E + L+ A +++++ ++L R
Sbjct: 433 IPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAVPLNSDMTDALSRA 479
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 196/370 (52%), Gaps = 7/370 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F L +++ +LL Y + K EAE +M E G + PYN M+ LY
Sbjct: 126 YFGGLSKEIKKSQCYGSLLKCYAEAKFVEEAEKFFGEMQEMGMMSS-YPYNVMMKLYWET 184
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ++KV M + ++++ PD+ T ++ L + D E E+ + K + W SY
Sbjct: 185 GQVEKVRTMYRAMEESGIKPDLFTIDILLTVYKASGDLEGIEEVLEKAKPRENLVGWHSY 244
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ + S ++K L KA L+E EKR KN RVAY LLS+ + G + EV RIW
Sbjct: 245 AIVASAFMKAGLQGKALQALQESEKRIDPKNGRVAYGFLLSMCADSGMRSEVDRIWDVYK 304
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S N + Y C IS+L+K+ + ++AE + EWES D R+ N+LL Y +E
Sbjct: 305 SKVPTCN-SMYMCRISALLKMNDTDEAEKAFREWESRFVHHDFRLINLLLNGYCAEGLME 363
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLIT 330
AE+ + +TKG P TW L G+ K GQ+ K ++ +KA+ S W PD +
Sbjct: 364 KAEALVDEAITKGRMPYANTWYKLAAGFFKDGQVLKAVDLTRKALASATSGWEPDLTNVL 423
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI-IVERMQKDNV 389
+ + EQ +++ AE + LR+ ++ ++Y+SLL+TY AG MP+ +++RM +D
Sbjct: 424 MSLDHFMEQKNVEAAEEMASLLRSLVPLTRDVYHSLLKTYVHAG-MPVSDLLDRMNEDGF 482
Query: 390 QMDAETQKVL 399
+ D ET ++L
Sbjct: 483 EADQETDRIL 492
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 213/453 (47%), Gaps = 59/453 (13%)
Query: 4 RRPHGAQVRAQSYR-QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
RR V Q+ R +A+++ + A E +F +LP+ + T ALL+SY + +
Sbjct: 79 RRGMNPTVSDQAIRLDLIAKSRGIA--AAEKYFLDLPETSKTHLTYGALLNSYCKELMTE 136
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
+AE+LMEKM E F + +N ++ +Y Q +KVP ++Q++K + PDV TYN+W+
Sbjct: 137 KAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWM 196
Query: 122 AACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
A A+ D E+ E+K+ ++ PDW +YS L S+Y++ + EKA LKE+EKR
Sbjct: 197 RALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNT 256
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ AY L++LY EV R+W+ + +M + Y +I L L + AE
Sbjct: 257 SNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEA 316
Query: 241 IYDEWES---------ISGTG-------DP------------------------------ 254
+ EWE+ G+G DP
Sbjct: 317 CFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPK 376
Query: 255 ---RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
RV N ++ AYI L+ A + R +G + TWE+ YLK G ++ C
Sbjct: 377 YDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWC 436
Query: 312 ----FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSL 366
KK S R WVP + + EE D+DGAE + L+ + ++ L
Sbjct: 437 ADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPVFEPL 496
Query: 367 LRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
+RTYA AGK + +R++ +NV++ T ++L
Sbjct: 497 VRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLL 529
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 213/453 (47%), Gaps = 59/453 (13%)
Query: 4 RRPHGAQVRAQSYR-QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
RR V Q+ R +A+++ + A E +F +LP+ + T ALL+SY + +
Sbjct: 139 RRGMNPTVSDQAIRLDLIAKSRGIA--AAEKYFLDLPETSKTHLTYGALLNSYCKELMTE 196
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWL 121
+AE+LMEKM E F + +N ++ +Y Q +KVP ++Q++K + PDV TYN+W+
Sbjct: 197 KAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWM 256
Query: 122 AACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
A A+ D E+ E+K+ ++ PDW +YS L S+Y++ + EKA LKE+EKR
Sbjct: 257 RALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNT 316
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ AY L++LY EV R+W+ + +M + Y +I L L + AE
Sbjct: 317 SNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEA 376
Query: 241 IYDEWES---------ISGTG-------DP------------------------------ 254
+ EWE+ G+G DP
Sbjct: 377 CFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPK 436
Query: 255 ---RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
RV N ++ AYI L+ A + R +G + TWE+ YLK G ++ C
Sbjct: 437 YDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWC 496
Query: 312 ----FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSL 366
KK S R WVP + + EE D+DGAE + L+ + ++ L
Sbjct: 497 ADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPVFEPL 556
Query: 367 LRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
+RTYA AGK + +R++ +NV++ T ++L
Sbjct: 557 VRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLL 589
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 181/348 (52%), Gaps = 7/348 (2%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++F N+P+ ++ ALL YV+ K +AEA M+KM E F PYN ++NLY
Sbjct: 110 ESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAEATMQKMREMDFATSSFPYNMLINLYS 169
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
G K+ ++QE++ P D T + A + +D EK +++ I DW
Sbjct: 170 QTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAYVAASDISAMEKFLNRMEEDPHISVDW 229
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV-AYSSLLSLYTNMGYKDEVLRIWK 208
YS S Y+K+ L +KA LK++E R+ A+ LLSLY G+K E+ R+W
Sbjct: 230 NIYSVAASGYLKVGLIDKALEMLKKIESNRPHLERLSAFKFLLSLYARTGHKQELYRVWN 289
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ Y+C+I+ L KL + E AE I+ EWE D RV N LL+AY R
Sbjct: 290 LYKPSYEY--PEAYSCMITCLTKLDDIEGAEKIFQEWECECTMYDFRVLNRLLSAYCKRC 347
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHR 327
+ AES N+++ + + P +TW +L GY++ QM K +E KKAI RK W P+
Sbjct: 348 LFDKAESLVNKVIEERM-PYASTWNILAKGYVEDKQMPKAVEMLKKAISVGRKGWRPNSI 406
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
++ A LE QG+++ E + +N G +I++ LLRT A K
Sbjct: 407 ILDACIEYLEGQGNLEEIEEIARLCKNLGIPDGDIHHRLLRTSAAGEK 454
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 201/426 (47%), Gaps = 56/426 (13%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F +LP+ + T ALL+SY + + +AE+LMEKM E F + +N ++ +
Sbjct: 194 AAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTM 253
Query: 90 YISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y Q +KVP ++Q++K + PDV TYN+W+ A A+ D E+ E+K+ ++ P
Sbjct: 254 YTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAP 313
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +YS L S+Y++ + EKA LKE+EKR + AY L++LY EV R+W
Sbjct: 314 DWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVW 373
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES---------ISGTG------ 252
+ + +M + Y +I L L + AE + EWE+ G+G
Sbjct: 374 RSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPG 433
Query: 253 -DP---------------------------------RVPNILLAAYINRNQLEMAESFYN 278
DP RV N ++ AYI L+ A +
Sbjct: 434 ADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKK 493
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC----FKKAIGSVRKWVPDHRLITAAYN 334
R +G + TWE+ YLK G ++ C KK S R WVP + +
Sbjct: 494 RAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMS 553
Query: 335 KLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDA 393
EE D+DGAE + L+ + ++ L+RTYA AGK + +R++ +NV++
Sbjct: 554 YFEENKDVDGAERYVGALKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGE 613
Query: 394 ETQKVL 399
T ++L
Sbjct: 614 GTAQLL 619
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 199/378 (52%), Gaps = 6/378 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +FENL ++ + T ALL+ YV+ + ++ +KM E GF+ L YN+++ LY
Sbjct: 113 EEYFENLKEQYKNEKTYGALLNCYVRQQNVEKSLLHFQKMKEMGFVSSSLTYNNIMCLYT 172
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDW 149
+ GQ +KVP +L E+K+ N +PD ++ + + A + +D E ++ ++ DW
Sbjct: 173 NIGQHEKVPGVLDEMKEENVAPDNYSFRICINAFGAMSDLERIGGILRDMERRPDFTMDW 232
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+ YI ++A LK E R +K+ Y+ L++LY +G K EVLR+W+
Sbjct: 233 NTYAVAAKFYIDGGDCDRAVELLKMSEYRLEKKDGEGYNHLITLYARLGNKIEVLRLWEL 292
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + +Y V+ SL+K+ ++AE + EWES D RVPN ++ Y ++
Sbjct: 293 EKEACKRRINQDYLTVLQSLMKIDGLKEAEVVLTEWESSGNCYDFRVPNTVIRGYTGKSM 352
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRKWVPDH 326
E AE+ L +G +W L+ Y +KG + +C K A+G RKW P
Sbjct: 353 EEKAEAMLEDLARRGKTTTPESWGLVATAYAEKGALGNAFKCMKTALGIEVENRKWRPGL 412
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL-IIVERMQ 385
+L+T+ + L +G + E + +LRN V+ ++Y++L++ + G + +++RM+
Sbjct: 413 KLVTSVLSWLGGEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGSNIDTLLKRMK 472
Query: 386 KDNVQMDAETQKVLKITS 403
D ++ D ET +L S
Sbjct: 473 DDQIETDEETTVILSTRS 490
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 184/343 (53%), Gaps = 13/343 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F N+P K++G ++ ALL+ Y K +AEA+M++M E GF + PL + MLNLY
Sbjct: 134 ENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMRELGFARKPLVFTVMLNLYY 193
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP--- 147
G +K+ +++E+++N S D Y + L++ A+ +D E EK LK+ + DP
Sbjct: 194 KTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLEKT---LKRIESDPNVV 250
Query: 148 -DWISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSLLSLYTNMGYKDEVLR 205
DW +Y+T+ + Y K+ L +KA LK E+ T + Y L++ Y G K++VLR
Sbjct: 251 LDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLMTQYATTGTKEDVLR 310
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+W+ + VI+SL+K + E AE I++EWES D +PN L+ AY
Sbjct: 311 VWELHKRYVGNRKN---ISVITSLLKFDDLESAEKIFEEWESQKLCDDIIIPNFLVDAYS 367
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVP 324
+ LE AE R ++ G KP TW LL GYL+ Q K +E K+ I S + P
Sbjct: 368 RKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKAVEAMKEMIVLSGPRSRP 427
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
A L++ GD+D AE + LR +S +I + LL
Sbjct: 428 STVSWVACLQHLKDSGDMDNAEGFINLLREKDIISLDIQDKLL 470
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 206/383 (53%), Gaps = 5/383 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+++ L+ A E +F +L D ++ T +LL+ Y K+ +A+A E M + +
Sbjct: 116 IAKSKGLE--AAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSN 173
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
LP+N+++ +Y+ GQ +KVP ++ +K K+ +P +TY++W+ +C S D + EK
Sbjct: 174 SLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLD 233
Query: 139 ELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+K + + W +++ L ++YIK+ L KA LK +E R Y L++LYT +
Sbjct: 234 EMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGI 293
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
EV R+W + + +N++ Y ++ +L KL + + + ++ EWES T D R+
Sbjct: 294 ANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMA 353
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
N+ +++Y+ +N E AE+ +N + K +LL LK Q + L+ F+ A+
Sbjct: 354 NVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVL 413
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ W LI++ + EE D+DGAE TL +S+E Y L++TY AGK
Sbjct: 414 DQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKA 473
Query: 377 PLIIVERMQKDNVQMDAETQKVL 399
+ +R+++ + +D E + +L
Sbjct: 474 CPDMKKRLEEQGILVDEEQECLL 496
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 206/383 (53%), Gaps = 5/383 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+++ L+ A E +F +L D ++ T +LL+ Y K+ +A+A E M + +
Sbjct: 117 IAKSKGLE--AAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSN 174
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
LP+N+++ +Y+ GQ +KVP ++ +K K+ +P +TY++W+ +C S D + EK
Sbjct: 175 SLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLD 234
Query: 139 ELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+K + + W +++ L ++YIK+ L KA LK +E R Y L++LYT +
Sbjct: 235 EMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGI 294
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
EV R+W + + +N++ Y ++ +L KL + + + ++ EWES T D R+
Sbjct: 295 ANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMA 354
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
N+ +++Y+ +N E AE+ +N + K +LL LK Q + L+ F+ A+
Sbjct: 355 NVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVL 414
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ W LI++ + EE D+DGAE TL +S+E Y L++TY AGK
Sbjct: 415 DQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKA 474
Query: 377 PLIIVERMQKDNVQMDAETQKVL 399
+ +R+++ + +D E + +L
Sbjct: 475 CPDMKKRLEEQGILVDEEQECLL 497
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 210/454 (46%), Gaps = 60/454 (13%)
Query: 4 RRPHGAQVRAQSYR-QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
RR V Q+ R VA+++ + A E +F +LP+ + T ALL+ Y + +
Sbjct: 79 RRGMNPTVGDQAIRLDLVAKSRGIA--AAEKYFMDLPETSKTHLTYGALLNCYCKESMTE 136
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
+AEALMEKM E F + YN ++ LY Q +KVP ++Q++K + PDV TYN+W+
Sbjct: 137 KAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYNVWM 196
Query: 122 AACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ A++ D E+ E+K+ ++ PDW +YS L S+Y++ L EKA LKE+EKR
Sbjct: 197 RSLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAALKELEKRNT 256
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ AY L++LY EV +W+ + + + Y +I L L + AE
Sbjct: 257 SNDLEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLANLKDLPAAEA 316
Query: 241 IYDEWES------------------------------------ISGTGDP---------- 254
+ EWE+ GT D
Sbjct: 317 CFKEWEARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGTEDKGMEEIDMKHP 376
Query: 255 ----RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
RV N L+ AY+ L+ A + R +G + TWE+ Y+K G ++
Sbjct: 377 KYDIRVANALMKAYVTEGMLDKAVALKKRAKMRGGRLNSKTWEIFMEHYIKVGDLKNAHW 436
Query: 311 CFKKAI----GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNS 365
C +AI S R WVP + E++ D+DGAE + L+ + T ++
Sbjct: 437 CTDRAIKKGHSSGRIWVPPRDVTETLMGYFEKKKDVDGAEKFVEVLKKVQKDLGTVVFEP 496
Query: 366 LLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L+RTYA AGK + R++ +NV++ E K++
Sbjct: 497 LVRTYAAAGKKFPGMRHRLKIENVEVSEEIAKLV 530
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 198/369 (53%), Gaps = 11/369 (2%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F ++P+ +RG + ALL+ Y K EAEA M KM E GF++ L YN MLNLY
Sbjct: 123 YFNSVPESLRGLEVYGALLNCYAHYKHLEEAEATMRKMREMGFVRNVLSYNVMLNLYYQM 182
Query: 94 GQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP----D 148
G+ +K+ ++QE++K +TY + L A + ++ E +K + K + DP D
Sbjct: 183 GKYEKIQVLMQEMEKWGICFSNITYKILLNAYVATSNIEEIKKILM---KMEADPLVSID 239
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIW 207
W +Y + Y+K L +K T L E+ K+ R A +LLSLYT +G K++V R+W
Sbjct: 240 WYAYVVAANGYLKAGLIDKTLTMLWRSEQLISGKSARFACETLLSLYTAVGNKEQVYRVW 299
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ +N + Y C+I+SL+KL + + AE I++EW SI D R+PN++++AY +
Sbjct: 300 NLYKTKGRSLNSS-YLCMINSLLKLDDVDGAERIWEEWVSIVKFFDIRIPNVMVSAYSKK 358
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDH 326
E AE+F ++V GIK +T + L GY +GQM K E KKAI S W P+
Sbjct: 359 GLWEKAEAFVGKIVASGIKIEASTLDRLATGYHVRGQMLKASETIKKAISISQPGWKPNV 418
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
+ A L+ + D+ E L L+ H+S+ Y+ L + + ++ M+
Sbjct: 419 YTLAACLEYLKGREDVKKIEDPLKILKEHCHLSSVSYDRLNSSIIDKENLCARALDHMEG 478
Query: 387 DNVQMDAET 395
++ ++ ET
Sbjct: 479 EDQALNGET 487
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 210/404 (51%), Gaps = 6/404 (1%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKK 60
ME + V Y +A+ + + A EN+F+ L + T ALL Y +
Sbjct: 68 MEWMQKRKMNVSHAVYLDLIAKKEGIA--AAENYFDGLSPSEQNHSTHGALLSCYCRELM 125
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNL 119
S +A L EKM + FL LP+N++++L++ Q +KV ++QE+K K SP TYN+
Sbjct: 126 SEKALTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNM 185
Query: 120 WLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
W+ + ND E E+ E+K + + W +Y+ L ++Y+K +KA + LK++E++
Sbjct: 186 WMQSYGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQ 245
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
R R AY L++LY EV R+W + S F + Y ++ +L KL + E
Sbjct: 246 IERDYREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGL 305
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ EWES + D R+ N+ + A + + E A ++ + + + E+
Sbjct: 306 LKCFKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVF 365
Query: 299 YLKKGQMEKVLECFKKAIGSVR--KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+LK Q++ L+ K A V+ +W P+ + ++A + E++ D++GAE L L++
Sbjct: 366 FLKNHQLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHIN 425
Query: 357 HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLK 400
+ + Y+ LL+TY AGK+ + +R+++D ++++ E + +L+
Sbjct: 426 RLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLE 469
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 202/388 (52%), Gaps = 9/388 (2%)
Query: 20 VAQAQALQTRARENFFENL-PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
+A+A+ L+ A EN+F NL P T AL++ Y + +A+A EKM E F+
Sbjct: 135 IAKAKGLE--AAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAKAHFEKMDELNFVN 192
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 137
LP+N+M+++Y+ Q +KVP ++ +K + SP VTY++W+ +C S ND + EK
Sbjct: 193 NSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKII 252
Query: 138 LEL-KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E+ K ++ W ++S L +++ K L EKA + LK MEK+ NR ++ L+SLY
Sbjct: 253 DEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNPNNRDSHHFLISLYAG 312
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
+ EV R+W+ + ++N+ Y ++ ++ KLG+ + + I+ EWES D R+
Sbjct: 313 ISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIFTEWESKCWAYDMRL 372
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
NI + Y+ N E AE + + K P +LL L+ G+ + ++ + A+
Sbjct: 373 ANIAINTYLKGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLENGKADLAMKHLETAV 432
Query: 317 G----SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAK 372
+ +W L++ + + D+DGAE L N V E + L++TYA
Sbjct: 433 SDPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKILSNWKPVDCETMSFLIKTYAA 492
Query: 373 AGKMPLIIVERMQKDNVQMDAETQKVLK 400
A K + ER+ + +++ E Q +LK
Sbjct: 493 AEKTCPDMRERLSQHQIEVSEEIQDLLK 520
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 194/374 (51%), Gaps = 3/374 (0%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F LPD + T ALL+ Y K +A + KM E G LP N++++L
Sbjct: 142 AAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDKATDIYRKMDELGISSSTLPINNLMSL 201
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ GQ KV + +E+K KN PD +T L +++ A+ N +T + E+++ K+
Sbjct: 202 YVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDTVGEVLKEMEEKKVALG 261
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YSTL SLY+ + E+A + LK++E + R + L+SLY ++G EV R+W
Sbjct: 262 WSAYSTLASLYVNANMVEEAESALKKLESLIDVQAGRQPFDFLMSLYASVGNLSEVNRVW 321
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K+ + Y ++ +L KL + ++ + IY++WES D R+ N++ A++
Sbjct: 322 NLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQIYEDWESNYENYDARLTNMMTRAHLRN 381
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DH 326
+ AE + ++ KG + T EL Y+ KG M L + RK D
Sbjct: 382 GLTKEAELLWEKVKEKGAEFDSKTCELFLEHYMGKGDMTSALNWVENMTKLPRKKSKLDQ 441
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
I+ EE D++GAE L LR +G + + Y SLLRTY AGK I + +++
Sbjct: 442 EKISCFLKYFEEHKDVEGAERFLNCLRTSGCIDGKAYESLLRTYLAAGKTSRSIRQMIKE 501
Query: 387 DNVQMDAETQKVLK 400
D +++ K+LK
Sbjct: 502 DKIEICYGIGKLLK 515
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 199/377 (52%), Gaps = 6/377 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F +LPD R T S LL+ Y +++ + + L E M + L YN+++ L
Sbjct: 125 AAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCL 184
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ Q +K+P + +++++ P+ +Y + + ND E+AEK EL++ P
Sbjct: 185 YLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVP- 243
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
W Y+TL + Y K++ +KA TLK+ E+ + + ++ LLS Y N G EV RIW+
Sbjct: 244 WSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWE 303
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ S F K + Y ++ +L KL +F+ + I+ EWES D ++PNI++ AY+++
Sbjct: 304 SLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKG 363
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDH 326
++ AE+ + + Y T+ + YL+K +M + L+ +K A V+ WVP+
Sbjct: 364 MVDKAEAMRQTTMAQD-HSNYRTFCIFAEFYLEKSKMNEALQVWKDAKKMVKGQDWVPE- 421
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
+L+ E+ D+DG E L+N G + E Y +L+RTY G+ I +RM+
Sbjct: 422 KLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEV 481
Query: 387 DNVQMDAETQKVLKITS 403
D V + E + LK S
Sbjct: 482 DRVDIRPEMFESLKAIS 498
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 192/351 (54%), Gaps = 5/351 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F NL DK + ALL+ Y + + +A A +KM E GF+ LPYN++++L
Sbjct: 137 AAETYFNNLSDKDKTEKPYGALLNCYTRERLVDKALAHFQKMKELGFVFTALPYNNLMSL 196
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDP 147
Y + Q ++VP ++ E+K N PD +Y + + + ++ D E E++ + +I
Sbjct: 197 YTNIEQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECEPQIVV 256
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +Y+ + S YIK +L EKA + LK+ E + K+ AY L+SLY ++G K EV R+W
Sbjct: 257 DWNTYTVVASQYIKGDLREKAYSALKKAEAKMGIKDLAAYRHLISLYGHLGDKSEVKRLW 316
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
MS + + +YT +++ LVKL E +AE++ EWE+ D +VPN+LL Y +
Sbjct: 317 AVQMSNCQRHLNTDYTNILAVLVKLDEIAEAEDLLKEWETSKNEFDFKVPNVLLTWYCQK 376
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---GSVRKWVP 324
L+ AE+ + + KG P T+WE++ GY +KG + + E K A+ WVP
Sbjct: 377 GLLDKAEALLDGFLIKGKMPPSTSWEIVASGYTEKGDVARAYELTKNALYMYAPNSGWVP 436
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
+ +I L ++ ++ E + L+ A +++++ +L R ++ K
Sbjct: 437 EPSMIEMILKYLGDEREVKDVEAFIDLLKVAVPMNSDMTEALSRARSREEK 487
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 186/344 (54%), Gaps = 12/344 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+ F N P ++ SALL+ Y + K +AE+++++M GF L YN +LN Y
Sbjct: 147 QKLFNNTPQHLKVLKVYSALLNCYAKAKLVEKAESVVQEMKSLGFANTLLVYNVILNFYY 206
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP--- 147
G DK+ ++QE+++N D +++ L+A AS +D EK L K + DP
Sbjct: 207 QTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYASVSDIVGIEKT---LAKMESDPNVF 263
Query: 148 -DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR-VAYSSLLSLYTNMGYKDEVLR 205
DW SY+ YIK+ L +KA L++ E+ K R AY SL++LY G +EVLR
Sbjct: 264 LDWTSYTAAAKGYIKVGLVDKALEMLEKSERLVTGKRRGTAYDSLITLYAATGKTNEVLR 323
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAY 264
IW ++ K+ Y +I+SL+KL +FE AE I++EWE + + D +PN L+ AY
Sbjct: 324 IW-ELYKKNEKVYKEAYISIITSLLKLDDFENAEKIFEEWEFQNHSCYDIHIPNFLIDAY 382
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSVRKWV 323
+ +E AE+ +R ++KG +P TW L GYL+ GQ K +E KKA + S R W
Sbjct: 383 SRKGLVEKAETLIDRAISKGGEPNAKTWYHLATGYLQNGQTLKAVEAMKKAVVVSGRMWK 442
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 367
P + ++ L+ +GD+ + + LR+ +S +I LL
Sbjct: 443 PSNEILANCLGYLKVEGDLGKLTNFMDLLRDNDIISLDIQERLL 486
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 194/374 (51%), Gaps = 3/374 (0%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F LPD + T ALL+ Y K +A + KM E G LP N++++L
Sbjct: 142 AAELYFAGLPDPGKNHKTYGALLNCYCSAKMEDKATDIYRKMDELGISSSTLPINNLMSL 201
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ GQ KV + +E+K KN PD +T L +++ A+ N +T + E+++ K+
Sbjct: 202 YVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDTVGEVLKEMEEKKVALG 261
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YSTL SLY+ + E+A + LK++E + R + L+SLY ++G EV R+W
Sbjct: 262 WSAYSTLASLYVNANMVEEAESALKKLESLIDVQAGRQPFDFLMSLYASVGNLSEVNRVW 321
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K+ + Y ++ +L KL + ++ + IY++WES D R+ N++ A++
Sbjct: 322 NLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQIYEDWESNYENYDARLTNMMTRAHLRN 381
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DH 326
+ AE + ++ KG + T EL Y+ KG M L + RK D
Sbjct: 382 GLTKEAELLWEKVKEKGAEFDSKTCELFLEHYMGKGDMTSALNWVENMTKLPRKKSKLDQ 441
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
I+ EE D++GAE L LR +G + + Y SLLRTY AGK I + +++
Sbjct: 442 EKISCFLKYFEEHKDVEGAERFLNCLRTSGCIDGKAYESLLRTYLAAGKTSRSIRQMIKE 501
Query: 387 DNVQMDAETQKVLK 400
D +++ K+LK
Sbjct: 502 DKIEICYGIGKLLK 515
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 165/292 (56%), Gaps = 11/292 (3%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACAS 126
M+KM E GF+K PL YN MLNLY G+ +K+ ++L+E+++ PD TYN+ + A A+
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 127 QNDKETAEKAFLELKKTKIDP----DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+D EK L K + DP DW +Y + + Y K L E + LK+ E+ K
Sbjct: 61 ASDITNMEKL---LSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDK 117
Query: 183 NR-VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ +AY L++LY +G KDEV R+W +L + N Y C+ISSL+KL + + AE I
Sbjct: 118 QKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRFNSG-YLCIISSLMKLDDIDGAERI 176
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
EWES + D R+PN+++ +Y + ++ AE++ NRL+ G +P TW+LL GY
Sbjct: 177 LKEWESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHS 236
Query: 302 KGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
G KV E KKAI S W P + ++ A L+ ++D AE ++ L
Sbjct: 237 NGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEIIGLL 288
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 18/381 (4%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
Q A E +F LPDK + ALL+ Y + + A +KM E GF+ LP
Sbjct: 137 GQVHGIGAAEAYFNTLPDKDKTEKPYGALLNCYTRELMVDGSLAHFQKMKELGFVFSSLP 196
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN+++ LY + GQ +KVP ++ E+K PD +Y + + + ++ D E +++
Sbjct: 197 YNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINSYGTRADFFGMENTLEDME 256
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ +I DW +Y+ + S YIK L EKA + LK+ E + K+ Y+ L+SLY +G K
Sbjct: 257 CEPQIVVDWNTYAVVASNYIKGNLREKAISALKKAEAKIDIKDSDTYNHLISLYGQLGDK 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
E+ R+W MS + + +YT +++ LV+L E E+AE + EWES D VPN+L
Sbjct: 317 SEMRRLWGLQMSNCKRHINKDYTTMLAMLVRLDEIEEAEALLKEWESSENAFDFHVPNVL 376
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV- 319
L Y +++ L+ AE+ + + KG P T+W ++ GY +KG K E K A+
Sbjct: 377 LTGYRHKDMLDKAEALLDDFLKKGKMPPSTSWAIVAIGYAEKGDCAKAYELIKNALCVYV 436
Query: 320 --RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMP 377
W+P +I L ++GD+ E + L+ A +++ + ++L R
Sbjct: 437 PRSGWIPRPAMIEMILKYLGDEGDLKDVETFVQLLQAAMPMNSHMTDALSRA-------- 488
Query: 378 LIIVERMQKDNVQMDAETQKV 398
RM+++ DAE + +
Sbjct: 489 -----RMREEKKSGDAEKEAL 504
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 189/369 (51%), Gaps = 6/369 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F +P ++R P +LL YV+ K +AE KM E G +K Y M+ LY+
Sbjct: 133 YFGMVPKRLRMPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMG-MKSSYTYTSMMKLYLET 191
Query: 94 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQL++V M Q+++ K PD + LAA + D E K + + W
Sbjct: 192 GQLERVHAMFQDMEEKGVKPDTFSVESMLAAYIAAEDVEGVGKVLDKANPHEKLVKWHGQ 251
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ SL++K + +A L E E+R K+ R+AY+ LL YT++G EV RIW
Sbjct: 252 ALAASLFMKSGMQVRAVMALLEAERRISPKSSRIAYAFLLKTYTDLGMYPEVGRIWSVYK 311
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS-GTGDPRVPNILLAAYINRNQL 270
S N Y IS+L+K+ + + AE EWE++S D R+ N+++ AY +
Sbjct: 312 SKVPPSNTM-YLSRISALLKMNDIDGAEATLKEWETVSLRYHDFRLINLMVDAYCREGLV 370
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLI 329
E A + + + KG P TW L G+ K G++ K ++ +KA+ S W PD +
Sbjct: 371 EKAVALVDDAIKKGRTPYANTWYKLAGGFFKTGEVSKAVDMTRKALESATPPWKPDLTNV 430
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
+ Q D++ AE + L+ G ++ E+Y+ LL+TY +AGK ++ERM+KD +
Sbjct: 431 LMSLEHFMNQKDVEAAEEIASMLQKLGPLTKEVYHCLLKTYVRAGKPVSDLLERMKKDGL 490
Query: 390 QMDAETQKV 398
+ D ET+++
Sbjct: 491 EADEETERM 499
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 154/275 (56%), Gaps = 2/275 (0%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F LP + LLH YV+ + + +AEA M K+ + G + YN M+ LY+
Sbjct: 148 EEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYV 207
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDW 149
+ Q +KVP +++++K+N P +V++YNLW+ AC+ + E F E+ K + W
Sbjct: 208 ATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGW 267
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ TL ++YI+ L EKA LKE EK+ R+ Y L++LY ++ K+ V R+W+
Sbjct: 268 STMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRA 327
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
++ A Y C++ LVKLGE +KAE ++ EWE D RV N+LL AY+
Sbjct: 328 SKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGL 387
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
LE AES + + +G P Y TWE+L G+++ Q
Sbjct: 388 LEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQ 422
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 154/275 (56%), Gaps = 2/275 (0%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F LP + LLH YV+ + + +AEA M K+ + G + YN M+ LY+
Sbjct: 148 EEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYV 207
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDW 149
+ Q +KVP +++++K+N P +V++YNLW+ AC+ + E F E+ K + W
Sbjct: 208 ATYQNEKVPLVIKDMKQNLIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGW 267
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ TL ++YI+ L EKA LKE EK+ R+ Y L++LY ++ K+ V R+W+
Sbjct: 268 STMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRA 327
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
++ A Y C++ LVKLGE +KAE ++ EWE D RV N+LL AY+
Sbjct: 328 SKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGL 387
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
LE AES + + +G P Y TWE+L G+++ Q
Sbjct: 388 LEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQ 422
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 191/374 (51%), Gaps = 3/374 (0%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F LPD + T ALL+ Y +KK +A L KM + G LP+N++++L
Sbjct: 165 AAEKYFNGLPDPAKNHRTYGALLNCYCSSKKEEKATDLFHKMDDLGIASSTLPFNNLMSL 224
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ GQ KV + +E+K KN PD +T + + + A+ N + E+ E+++
Sbjct: 225 YMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVLMTSYAALNKIDAVEEVLKEMEEKNAALG 284
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YSTL S+Y+ L EKA + LK++E R R + L+SLY ++G EV R+W
Sbjct: 285 WSAYSTLASIYVSAGLVEKAESALKKLEGLVQPRDGRQPFDFLMSLYASVGNLSEVNRVW 344
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K+ + Y ++ +L KL + ++ + I++EWES D ++ NI+ A++
Sbjct: 345 DVVKATFPKVTNTSYFSMLQALYKLNDADRIKQIFEEWESNHECYDVKLTNIMTRAHLKN 404
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DH 326
+ AE + + KG T EL Y+ M+ L + +K D
Sbjct: 405 GLTKEAELLWEKAKAKGADFDSKTCELFLDHYMGTEDMKSALHWVENVTKLPKKAGKLDQ 464
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
I EEQ D+ GAE L LR G + ++Y SLLRTY AG+ + ++++
Sbjct: 465 EKIQKFSKYFEEQKDVQGAEKLCSCLRTLGCIDGKVYESLLRTYLAAGETNHSLRQQIKD 524
Query: 387 DNVQMDAETQKVLK 400
D +++ + K+LK
Sbjct: 525 DKIEICYDIGKLLK 538
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 175/337 (51%), Gaps = 7/337 (2%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++F N+P+ ++ ALL YV+ K +AEA M+KM E F PYN ++NLY
Sbjct: 110 ESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAEATMQKMREMDFATSSFPYNMLINLYS 169
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
G K+ ++QE++ P D T + A + +D EK +++ I DW
Sbjct: 170 QTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAYVAASDISAMEKFLNRMEEDPHISVDW 229
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV-AYSSLLSLYTNMGYKDEVLRIWK 208
YS S Y+K+ L +KA LK++E R+ A+ LLSLY G+K E+ R+W
Sbjct: 230 NIYSVAASGYLKVGLIDKALEMLKKIESNRPHLERLSAFKFLLSLYARTGHKQELYRVWN 289
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ Y+C+I+ L KL + E AE I+ EWE D RV N LL+AY R
Sbjct: 290 LYKPSYEY--PEAYSCMITCLTKLDDIEGAEKIFQEWECECTMYDFRVLNRLLSAYCKRC 347
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHR 327
+ AES N+++ + + P +TW +L GY++ QM K +E KKAI RK W P+
Sbjct: 348 LFDKAESLVNKVIEERM-PYASTWNILAKGYVEDKQMPKAVEMLKKAISVGRKGWRPNSI 406
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYN 364
++ A LE QG+++ E + +N G +I++
Sbjct: 407 ILDACIEYLEGQGNLEEIEEIARLCKNLGIPDGDIHH 443
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 189/370 (51%), Gaps = 6/370 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F +P ++R P +LL YV+ K +AE KM E G + Y M+ LY+
Sbjct: 130 YFGMVPKQLRKPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMG-MTSSYAYTWMMKLYLQT 188
Query: 94 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQL++V M Q+++ K PD + LAA + D + K + + W +
Sbjct: 189 GQLERVHAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVGKVLDKANPHEKLVTWHGH 248
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++ SL++K + A L E E+R K+ R+AY+ LL YT +G E RIW
Sbjct: 249 ASAASLFMKSGMQVGAVMALVEAERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYK 308
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS-GTGDPRVPNILLAAYINRNQL 270
S N Y +S+L++ + + AE EWE++ D R+ N+++ AY +
Sbjct: 309 SKVPPCNTM-YMSRLSALLRTNDIDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLV 367
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLI 329
E A + + + KG P TW L G+ K GQ+ + ++ +KA+ S W PD +
Sbjct: 368 EKAVALVDGAIKKGRTPYANTWYKLAGGFFKTGQVPEAVDMTRKALDSATPPWRPDLANV 427
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
+ N +Q D+ AE ++ TL+ ++ ++Y+ LL+TY +AGK P ++ERM++D +
Sbjct: 428 LMSLNHFVDQKDVGAAEEMVSTLQKLVPLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGL 487
Query: 390 QMDAETQKVL 399
+ D ET+++L
Sbjct: 488 EADEETERIL 497
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 182/377 (48%), Gaps = 7/377 (1%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
RR H ++ +R R + +P G D ALL YV+ K
Sbjct: 68 RRFHHALEISQWMTDRRYFTLTPSDAAIRLDLISMVPWTXAGXDAYGALLSGYVREKSVE 127
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWL 121
+AEA M+KM E F PYN ++NLY G K+ ++QE++ P D T +
Sbjct: 128 KAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLM 187
Query: 122 AACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
A + +D EK +++ I DW YS S Y+K+ L +KA LK++E
Sbjct: 188 VAYVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRP 247
Query: 181 RKNRV-AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
R A+ LLSLY +K E+ R+W + Y+C+I+ L KL + E AE
Sbjct: 248 HLERXSAFKXLLSLYARTXHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEGAE 305
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
I+ EWE D RV N LL+AY R + AES N+++ + + P +TW +L GY
Sbjct: 306 KIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERM-PYASTWNILAKGY 364
Query: 300 LKKGQMEKVLECFKKAIGSVRK-WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV 358
++ QM K +E KKAI RK W P+ ++ A LE QG+++ E + +N G
Sbjct: 365 VEDKQMPKAVEMLKKAISVGRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIP 424
Query: 359 STEIYNSLLRTYAKAGK 375
+I++ LLRT A K
Sbjct: 425 DGDIHHRLLRTSAAGEK 441
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 189/370 (51%), Gaps = 6/370 (1%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F +P ++R P +LL YV+ K +AE KM E G + Y M+ LY+
Sbjct: 85 YFGMVPKQLRKPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMG-MTSSYAYTWMMKLYLQT 143
Query: 94 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQL++V M Q+++ K PD + LAA + D + K + + W +
Sbjct: 144 GQLERVHAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVGKVLDKANPHEKLVTWHGH 203
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++ SL++K + A L E E+R K+ R+AY+ LL YT +G E RIW
Sbjct: 204 ASAASLFMKSGMQVGAVMALVEAERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYK 263
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS-GTGDPRVPNILLAAYINRNQL 270
S N Y +S+L++ + + AE EWE++ D R+ N+++ AY +
Sbjct: 264 SKVPPCNTM-YMSRLSALLRTNDIDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLV 322
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLI 329
E A + + + KG P TW L G+ K GQ+ + ++ +KA+ S W PD +
Sbjct: 323 EKAVALVDGAIKKGRTPYANTWYKLAGGFFKTGQVPEAVDMTRKALDSATPPWRPDLANV 382
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
+ N +Q D+ AE ++ TL+ ++ ++Y+ LL+TY +AGK P ++ERM++D +
Sbjct: 383 LMSLNHFVDQKDVGAAEEMVSTLQKLVPLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGL 442
Query: 390 QMDAETQKVL 399
+ D ET+++L
Sbjct: 443 EADEETERIL 452
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 7/346 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
Q A E +F NL DK + ALL+ Y + +A A M E GF+ LP
Sbjct: 126 GQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKELGFVFSTLP 185
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ LY GQ ++VP ++ E+K N PD +Y + + + ++ D E E++
Sbjct: 186 YNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEME 245
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ +I DW +Y+ + S YIK +L EKA + L + E + +++ AY L+SLY N+G K
Sbjct: 246 CEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDK 305
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
E R+W MS + + +Y ++S LVKL E +AE++ EWES + D RVPN+L
Sbjct: 306 SEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNSFDFRVPNVL 365
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L Y + L+ AE + + KG P T+W ++ GY +KG + K E K A+ SV
Sbjct: 366 LTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAEKGDVAKAYEMTKNAL-SVH 424
Query: 321 K----WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
W+P ++ L ++G++ E + L+ A V +++
Sbjct: 425 APNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAAVPVDSDM 470
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 184/388 (47%), Gaps = 35/388 (9%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+A A +N+F NLP+ + A+L+ Y + +AE MEKM E +P
Sbjct: 110 AKARGITAAKNYFVNLPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSMP 169
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ LY GQ +KV ++QE+K N D TYN+W+ A A+ ND + E+ E+
Sbjct: 170 YNSLIMLYTKVGQPEKVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEM- 228
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
L E+EKR K+ AY L++ Y
Sbjct: 229 ----------------------------MALTELEKRNAFKDLTAYQFLITFYGXTSNLY 260
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
EV R+W+ + F K + Y +I LVK + E + E E T D RV N+L+
Sbjct: 261 EVFRVWRSLRLAFPKTANISYLNMIRVLVKSKDLLGEEKCFXEXECGCPTYDIRVVNVLI 320
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR- 320
AY + LE AE +G KP T E+ YL+KG + ++C +AI R
Sbjct: 321 RAYAKLDMLEKAEELKEHARRRGAKPNGKTLEIFMDYYLQKGNFKSTVDCLDEAISMGRW 380
Query: 321 ---KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
KWVP ++I E++ D+DGAE L L+ + E++ SL RTYA G++
Sbjct: 381 NGEKWVPXSKIIDIMMRNFEQEKDVDGAEEFLEILKKSMESPGVEVFESLTRTYAATGRI 440
Query: 377 PLIIVERMQKDNVQMDAETQKVLKITSE 404
++ R++ +NVQ+ TQK+L+ SE
Sbjct: 441 SSAMLRRLKMENVQVSEGTQKLLEAISE 468
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 7/346 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
Q A E +F NL DK + ALL+ Y + +A A M E GF+ LP
Sbjct: 22 GQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKELGFVFSTLP 81
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ LY GQ ++VP ++ E+K N PD +Y + + + ++ D E E++
Sbjct: 82 YNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEME 141
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ +I DW +Y+ + S YIK +L EKA + L + E + +++ AY L+SLY N+G K
Sbjct: 142 CEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDK 201
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
E R+W MS + + +Y ++S LVKL E +AE++ EWES + D RVPN+L
Sbjct: 202 SEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNSFDFRVPNVL 261
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L Y + L+ AE + + KG P T+W ++ GY +KG + K E K A+ SV
Sbjct: 262 LTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAEKGDVAKAYEMTKNAL-SVH 320
Query: 321 K----WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
W+P ++ L ++G++ E + L+ A V +++
Sbjct: 321 APNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAAVPVDSDM 366
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 193/378 (51%), Gaps = 7/378 (1%)
Query: 30 ARENFFENL-PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
A EN+F NL P T AL++ Y + +A+A E M E F+ LP+N+M++
Sbjct: 156 AAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMS 215
Query: 89 LYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKID 146
+Y+ Q +KVP ++ +K + SP VTY++W+ +C S ND + EK E+ K ++
Sbjct: 216 MYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAK 275
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
W ++S L ++Y K L EKA + LK ME++ NR ++ L+SLY + EV R+
Sbjct: 276 TTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRV 335
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W+ + ++N+ Y ++ ++ KLG+ + + I+ EWES D R+ NI + Y+
Sbjct: 336 WESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLK 395
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV----RKW 322
N E AE + + K P +LL L+ + + ++ + A+ +W
Sbjct: 396 GNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEW 455
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVE 382
L++ + E+ D+DGAE L N + +E L++TYA A K + E
Sbjct: 456 GWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRE 515
Query: 383 RMQKDNVQMDAETQKVLK 400
R+ + +++ E Q +LK
Sbjct: 516 RLSQQQIEVSEEIQDLLK 533
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 193/378 (51%), Gaps = 7/378 (1%)
Query: 30 ARENFFENL-PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
A EN+F NL P T AL++ Y + +A+A E M E F+ LP+N+M++
Sbjct: 156 AAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMS 215
Query: 89 LYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKID 146
+Y+ Q +KVP ++ +K + SP VTY++W+ +C S ND + EK E+ K ++
Sbjct: 216 MYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAK 275
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
W ++S L ++Y K L EKA + LK ME++ NR ++ L+SLY + EV R+
Sbjct: 276 TTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRV 335
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W+ + ++N+ Y ++ ++ KLG+ + + I+ EWES D R+ NI + Y+
Sbjct: 336 WESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLK 395
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV----RKW 322
N E AE + + K P +LL L+ + + ++ + A+ +W
Sbjct: 396 GNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEW 455
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVE 382
L++ + E+ D+DGAE L N + +E L++TYA A K + E
Sbjct: 456 GWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRE 515
Query: 383 RMQKDNVQMDAETQKVLK 400
R+ + +++ E Q +LK
Sbjct: 516 RLSQQQIEVSEEIQDLLK 533
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 188/351 (53%), Gaps = 5/351 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F NL DK + ALL+ Y + +A A +KM E GF+ PLPY++++ L
Sbjct: 137 AAETYFNNLSDKDKTEKPYGALLYCYTRECLVDKALAHFQKMKELGFVFTPLPYSNLMIL 196
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDP 147
Y + Q ++VP ++ E+K N P+ +YN+ + A ++ D E E++ +++
Sbjct: 197 YANVEQHERVPSVMAEMKSNGIVPNNFSYNICINAYGTRADFSGLENTLEEMEFASQVVV 256
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
DW +Y+ + S YIK +L EKA + L++ E + K+ AYS L+SLY ++G K E+ R+W
Sbjct: 257 DWRTYADVASHYIKGDLREKAYSALQKAEAKMDEKDSFAYSHLISLYGHLGDKSEIKRLW 316
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
M + Y +++ LVKL E +AE++ +WES D +VPNILL Y
Sbjct: 317 VLQMLKCKGCINKGYKYMLTVLVKLDEIAEAEDLLKKWESSKNEFDFKVPNILLKGYCQW 376
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV---RKWVP 324
L+ AE+ + + KG KP T+W ++ Y +KG + + E K+A+ W+P
Sbjct: 377 GLLDKAEALLDGFLRKGKKPSATSWAIVASAYAEKGDVPRAYELTKRALSMCVPDSGWIP 436
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
+ +I L ++G++ E + L+ +++++ +L R ++ K
Sbjct: 437 EPSMIEVILKYLGDEGEVKDVEAFIDLLKVVVPMNSDMTEALSRARSREEK 487
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 186/374 (49%), Gaps = 3/374 (0%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A EN+F NLPD + T ALL Y K +A L +M E GF LP N++++L
Sbjct: 151 AAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKATYLYRQMDELGFWSGTLPINNLMSL 210
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ Q KV + +E+K KN PD +T + + + A+ N + E+ E+ + +
Sbjct: 211 YMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTSYAASNKIDAIEELLKEMVEKDVSLG 270
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YSTL S+Y+ EKA + LK++E R + L+SLY ++G E+ R+W
Sbjct: 271 WSAYSTLASIYVNAGQVEKAESALKKLEGLIGAEDGRQPFDFLMSLYASLGNLSEINRVW 330
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F+ + + Y ++ +L KL + ++ + IY EWES T D R+ N+++ ++
Sbjct: 331 DVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQIYMEWESNYQTYDVRLTNMMIRGHLRL 390
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DH 326
E AE+ + KG++ T EL Y+ KG M L + +K D
Sbjct: 391 GMSEEAETLREKAKEKGVEFDSKTCELFLDHYMGKGDMNSALNWVENMTKLPKKAGKLDQ 450
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
I EE D D AE LR G + + Y SLLRTY AGK + ++++
Sbjct: 451 DRIYKFQKYFEEHKDADSAERFCNCLRMLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKN 510
Query: 387 DNVQMDAETQKVLK 400
D +++ + K+LK
Sbjct: 511 DKIEICYDIGKLLK 524
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 185/352 (52%), Gaps = 5/352 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
Q A E +F L DK + ALL+ Y + ++ A +KM E GF+ LP
Sbjct: 137 GQVHGVGAAEAYFNKLADKDKTEKPYGALLNCYTRELLVDKSLAHFQKMKELGFVFSSLP 196
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN+++ LY + GQ +KVP ++ E+K N PD +Y + + + ++ D E E++
Sbjct: 197 YNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGARADFFGMENTLEEME 256
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ +I DW +Y+ L + YIK L +KA + L++ E + K+ Y+ L+SLY +G K
Sbjct: 257 CEPQIVVDWNTYAVLANNYIKGNLRDKAISALQKAEAKIDIKDSDTYNHLMSLYGQLGDK 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
EV R+W MS + + +YT +++ L+KL E E+AE + EWES D VPN+L
Sbjct: 317 SEVKRLWALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEALLKEWESSENAFDFHVPNVL 376
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---G 317
L Y ++ L+ AE+ + + KG P T+W ++ GY +KG + K E K A+
Sbjct: 377 LTGYRQKDLLDKAEALLDDFLKKGKMPTSTSWAIVAIGYAEKGDVAKAYELTKNALCVYA 436
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
W+P +I L ++ ++ E + L+ A +++++ ++L R
Sbjct: 437 PNSGWIPRPAMIEMILKYLGDECNLKDVETFVHLLQAAVPMNSDMTDALARA 488
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
Q A E +F NL DK + ALL+ Y + +A A + M E GF+ L
Sbjct: 124 GQVHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFQNMKELGFVFSALS 183
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN+++ LY + GQ ++VP ++ E+K++ PD +Y + + + + D E E++
Sbjct: 184 YNNLMGLYTNIGQHERVPMVMAEMKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEME 243
Query: 142 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ +I DW +Y+ + S YIK L EKA + L++ E + +K+ AY L+SLY ++G K
Sbjct: 244 CEPQIVVDWNTYAVVASNYIKGYLREKAYSALRKAEAKMDKKDGDAYGHLISLYGHLGDK 303
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
EV R+W M + + +YT +++ LVKL E +AE++ EWES D +VPN+L
Sbjct: 304 LEVKRLWALHMLNCKRYINKDYTNMLAVLVKLDEITEAEDLLKEWESSKNAFDFQVPNVL 363
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV- 319
L Y + L+ AE+ + + KG P T+W ++ GY +KG + K E K A+
Sbjct: 364 LTGYRQKGLLDKAETLLDGFLKKGKTPTSTSWWIVAIGYAEKGDVAKAYELTKNALSVFA 423
Query: 320 --RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAK 372
W+P +I L +G++ E + L+ A +++++ +L R A+
Sbjct: 424 PNSGWIPRPSIIEMILKYLGNEGEVKDVEAFVNLLKVAVPMNSDMTEALSRARAR 478
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 194/376 (51%), Gaps = 7/376 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F +LP + T ALL+ Y + +A L +KM E + L +N+++ +
Sbjct: 94 AAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALTLFKKMDELK-ISTSLSFNNLMTM 152
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDP 147
Y+ +KVP ++ E+K + TYN+W+ +CAS ND E+ E+K + +
Sbjct: 153 YMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLNDIGKVEEILEEMKMEDRNKF 212
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEK--RTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
DW +YS L S Y+K EKA LK++E+ ++ + +R+ Y L+SLY + EV R
Sbjct: 213 DWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKNDRLVYHCLISLYASTSNLSEVNR 272
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
IW + S+++ M + Y ++ +L KL + E + Y EWES D R+ N ++ AY+
Sbjct: 273 IWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEWESNCRNFDLRIVNDIIGAYL 332
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV--RKWV 323
++ E A + + P E+ +LK Q++ + A+ ++W
Sbjct: 333 QQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKLKQVDSAFSHLESALSESKEKEWH 392
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVER 383
P TA N EE+ D++GAE L+ + Y+ LL+TY AGK+ + +R
Sbjct: 393 PSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLDASGYHLLLKTYVAAGKLAPDMRKR 452
Query: 384 MQKDNVQMDAETQKVL 399
+++D++++ +E +++L
Sbjct: 453 LKEDDIEISSELEELL 468
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 183/370 (49%), Gaps = 40/370 (10%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F L K++ T A+L+ V+ K +AEA+M++M E G PYN ++ LY
Sbjct: 31 ENYFNKLSVKLKTKYTYGAILNGCVREKSVQKAEAVMQEMREGGMTTSSFPYNILIILYS 90
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAF-LELKKTKIDPDW 149
G DK+P +++E+++N + D T +AA + +D E+ L + ++ DW
Sbjct: 91 QTGDFDKIPPLMKEMERNGIAEDKYTLRNLIAASVAASDISGVERILKLMEENPELGLDW 150
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEK-RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
Y+ Y+K+ E A T L+++EK RK + ++ LLSLY G KDE+ RIW
Sbjct: 151 KLYAMAADAYLKIGSIETALTMLEKLEKWMAFRKKKAVFNFLLSLYAKTGNKDELYRIW- 209
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES-ISGTGDPRVPNILLAAYINR 267
+ ++ D Y C+I SL KL + E AE I++EWES + T D RV N LL AY NR
Sbjct: 210 NLYKPSSESMDTSYCCMIDSLTKLDDIEGAEKIFEEWESQCTTTYDFRVLNGLLVAYCNR 269
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
E AE+ + V +G P +TW ++ GY++ Q+ K +E K+A+ R W PD
Sbjct: 270 GLFEKAEAAIEKAV-QGRTPYASTWHVMAKGYMEHDQIPKTVEMLKRAVNVGRDWKPDPI 328
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
L+ N+ L AGK ++ +M+ D
Sbjct: 329 LV----------------------------------NTCLENSMAAGKSVNDVLYQMKMD 354
Query: 388 NVQMDAETQK 397
+D ETQK
Sbjct: 355 GFAVDEETQK 364
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 189/374 (50%), Gaps = 3/374 (0%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +FE LPD + T ALL+ Y +K+ +A L KM E G LP N++++L
Sbjct: 171 AAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKATDLYRKMDELGISSSTLPINNLMSL 230
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ GQ KV + +E+K KN PD +T + + + A+ N + E+ E+++
Sbjct: 231 YMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTSLAALNKIDDVEQVLKEMEEKDGVLG 290
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTC-RKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YSTL S+Y L EKA + LK++E R R + L+SLY ++G EV R+W
Sbjct: 291 WSAYSTLASIYQSAGLVEKAESALKKLEGLVQDRDGRQPFDFLMSLYASVGNLSEVKRVW 350
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + F K+ + Y ++ +L+KL + + + +++EWES D ++ N++ A++
Sbjct: 351 GVVKATFPKVTNTSYFSMLQALLKLNDADYMKQVFEEWESNHEFYDAKLTNVMTRAHLKN 410
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DH 326
+ AE + + KG T EL Y+ G M+ L + +K D
Sbjct: 411 GMAKEAELLWEKAKEKGACFDSKTCELFLDHYMVAGDMKSALNWVENVTKLPKKTAKLDQ 470
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
I EEQ D+ GAE LR G + + Y SLLRTY AG+ + ++++
Sbjct: 471 DKIPKFSKYFEEQKDVQGAERFCRCLRALGCIDGKAYESLLRTYLAAGETSRSLRQQIKD 530
Query: 387 DNVQMDAETQKVLK 400
D +++ + K+LK
Sbjct: 531 DKIEICYDIGKLLK 544
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 184/326 (56%), Gaps = 11/326 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E ++ ++PD +RG ALL+ Y ++ +AEA M+KM E G ++ L YN ML+LY
Sbjct: 92 EEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATMQKMRELGLVQT-LSYNVMLSLYS 150
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
G+ +K+ +++E++ K + D+ T+N+ L A + ++ E EK ++++ + I+ D+
Sbjct: 151 HMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVATSNIEEMEKLLMKMETDSLINIDF 210
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTC----RKNRVAYSSLLSLYTNMGYKDEVLR 205
++ + + Y+K L EK+ LK E+ T AY LL+LY + G KD V R
Sbjct: 211 HTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVGTTKAHAYEMLLTLYGSAGNKDGVYR 270
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+W + ++ ++ Y C+I+SL++LG+ + AE I +EW S D R+PN ++ AY
Sbjct: 271 VWNSYKNT-GRIFNSTYICMINSLMRLGDIDGAEWISEEWVSRKTLYDIRIPNTMIRAYS 329
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WV 323
+ + AE + N++V G++ ++W+ L GY GQM K +E KKAI S+ K W
Sbjct: 330 RKGLWKKAEEYVNKIVESGMQLEASSWDHLATGYHFGGQMAKAVETLKKAI-SISKPGWK 388
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLL 349
P+ + LE +GD + AE LL
Sbjct: 389 PNPYTLKTCLWYLESKGDEEAAEELL 414
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 138/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
K+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 138/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
K+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 138/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGKLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
K+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K G++EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGKLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 182/366 (49%), Gaps = 15/366 (4%)
Query: 6 PHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAE 65
P VR + + A A E +FE LPDK + + ALL YVQ +AE
Sbjct: 76 PSDVVVRLELVHRIYGSAHA------EKYFEKLPDKFKCREVYCALLSGYVQESSVRKAE 129
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAAC 124
A+ME+M G PYN ++NLY NG +K+ ++QE++ N T + +AA
Sbjct: 130 AIMEEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAY 189
Query: 125 ASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK-RTCRK 182
+ ++ E+ +++K ++ DW YS S Y+K L EKA T L+++E K
Sbjct: 190 VAASNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMPLEK 249
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
A+ L++LY G +DE+ +W L ++ + +ISSL KL + + AE I+
Sbjct: 250 KTSAFDILVTLYGKTGKRDELYLVWNTYKPLI-ELKETSVMTMISSLSKLDDIKGAEKIF 308
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
EWES D RV N LL AY R L K PC ++W +L GY++
Sbjct: 309 REWESQCMMYDFRVLNTLLFAYC-RKGLLKKAEAAVEKAAKDRTPCASSWGILAMGYIEH 367
Query: 303 GQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEH---LLVTLRNAGHV 358
QM K +E KKA+ S + W P+ +TA N LE+QGD++G E LL +L V
Sbjct: 368 NQMYKAVEMLKKALSISGQGWRPNSMTLTACLNFLEKQGDVEGVEEVTKLLKSLEPLNEV 427
Query: 359 STEIYN 364
+ E+ N
Sbjct: 428 TKELGN 433
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 173/327 (52%), Gaps = 4/327 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F NL + T LL+ Y + K +A AL EKM E F L +N++++L++
Sbjct: 170 EEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHM 229
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP-DW 149
G+ + VP ++ E+KK + SPD TYN+ + + A ND E AE+ E+K+ D W
Sbjct: 230 RLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSW 289
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L ++Y+ L EKA LK++E+ +R+AY L+SLY + EV R+W
Sbjct: 290 TTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNS 349
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ S F K N+ Y ++ +L L + + + ++EW+S + D R+ N+ + A++ +
Sbjct: 350 LKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDM 409
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHR 327
++ AES V + P YT ++ +LK +++ L+ + A V+ +W P
Sbjct: 410 IKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPE 469
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRN 354
+ A EE+ D++GAE L+N
Sbjct: 470 RVLAFLKYFEEEKDVEGAEKFCKILKN 496
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV ++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
K+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E++
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEDL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI----DGAEHLLVTLRN 354
K GQ+EK +C + + R +P H L++ Y L +G++ + + + + N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEVYRVWNIYKSVFTNIPN 184
Query: 355 AGHVSTEIYNSLLRT 369
G+ S + +SL+R+
Sbjct: 185 WGYHS--VISSLVRS 197
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
K+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI----DGAEHLLVTLRN 354
K G++EK +C + + R +P H L++ Y L +G++ + + + + N
Sbjct: 126 KLGELEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEVYRVWNIYKSVFTNIPN 184
Query: 355 AGHVSTEIYNSLLRT 369
G+ S + +SL+R+
Sbjct: 185 WGYHS--VISSLVRS 197
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 138/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
+V +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
K+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E ++ E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K G++EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGELEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K G++EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGELEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 193/352 (54%), Gaps = 9/352 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+ Q + L + E +F ++ ++ ALL+ YV+ ++ A M+KM E G
Sbjct: 124 IGQVRGLDSA--EKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLASS 181
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFL 138
PL YN ++ LY++ GQ DKVP +L E+K+N PD +Y + +++ +++D + E
Sbjct: 182 PLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVLK 241
Query: 139 ELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++ +T I DW +YS + +IK + +KA L++ E + ++ + ++ L+S YTN+
Sbjct: 242 EMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKV-DEDALGFNHLISHYTNL 300
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G+K+EV+R+W + ++N +Y ++ SLVKL E+AEN+ EWES D RVP
Sbjct: 301 GHKNEVMRLWALLKKGKKQLN-RDYITMLGSLVKLELLEEAENLVMEWESSCQCYDFRVP 359
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
N++L Y + +E AE ++ G+ P +W ++ GYL+K +EK EC K+A+
Sbjct: 360 NVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALA 419
Query: 317 --GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSL 366
G + W P ++++ L E + + + +L+ + ++ N+L
Sbjct: 420 VKGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNNAL 471
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 190/382 (49%), Gaps = 12/382 (3%)
Query: 27 QTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
Q E EN P + + LL +YV ++ + +A AL+EK+ G L P +N M
Sbjct: 32 QFTVAEQLLENSPPEFKTELAYHTLLKNYVDHQMAQKAGALLEKLKSTGLLTLPFSFNQM 91
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTK- 144
+ LY G +K+P++L+++K + P DV TYN+ + + D E EK F ELK +
Sbjct: 92 MLLYKRKGMENKLPEILEDMKAHGVPKDVYTYNILMDVKSRSGDIEGMEKIFEELKADEN 151
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ D ++ TL + + L EKA LKEME+ +NR AY L+S Y +G D V
Sbjct: 152 VKADAATFGTLATACVHAGLLEKAKVYLKEMEEGDIFRNRSAYDILISQYGAVGDVDGVE 211
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
R+W+K+ S +++ Y VI + KLG EKAE +Y+ G R N LL+AY
Sbjct: 212 RVWEKVKS-GPIVSNRSYITVIEAFGKLGMVEKAEELYEVMSQSKGLILSRQFNSLLSAY 270
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-----GSV 319
+ ++ AE + + G K T+ L GYLK Q++K + K+A+ G
Sbjct: 271 TRQGLMDKAEKLMDDMEKLGRKKNAITYHHLVTGYLKTDQLDKAVAAMKEALVDPKQGRS 330
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPL 378
+ W + A + E+G++ AE ++ A ++ ++YN LL+ Y + L
Sbjct: 331 KPWF---ETLVAVLDAFAERGNVVNAEQQFQEIKKAYPRLNIQVYNILLKAYINSRVPAL 387
Query: 379 IIVERMQKDNVQMDAETQKVLK 400
+ RM D + + ET +L+
Sbjct: 388 GFLHRMSTDKLVPNDETLSLLR 409
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ +KA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLDKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ++K +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLDKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
+V +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E ++ E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A S E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A + E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 197/376 (52%), Gaps = 11/376 (2%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A ENFF LP + T ALL+ Y + +A + + M E G++ L +N+++ L
Sbjct: 113 AAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYV-TNLAFNNVMTL 171
Query: 90 YISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDP 147
++ G+ KVPQ+++ +KK T P TY++W+ +CAS ND AE+ + E+K + +
Sbjct: 172 FMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQI 231
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YS L S+Y+K + EKA LK +E++ K R AY LL LY G EV R+W
Sbjct: 232 GWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVW 291
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ S+ + + + Y ++S+L +L + E + EWE+ + D R+ ++ ++A++N+
Sbjct: 292 DSLKSV-SPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLVSVCVSAHLNQ 350
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPD 325
N LE AE + + P + E +LKK +++ + + A+ V+ KW P
Sbjct: 351 NMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGDKWRPS 410
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQ 385
+++ A EE+ D+DG + L L+ + +S +++ A K I M+
Sbjct: 411 PQVVGAFLKYYEEETDVDGVDELSKILK-----ANNFDDSWIKSCITASKSSPEIDPGMK 465
Query: 386 KDNVQMDAETQKVLKI 401
+D+ A+ ++L I
Sbjct: 466 EDSQVYHAQETRLLDI 481
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 191/386 (49%), Gaps = 12/386 (3%)
Query: 22 QAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A+ Q E E+ P + + LL +Y + + +A+AL+EK+ G L P
Sbjct: 67 KAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTGILTLPF 126
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLEL 140
+N M+ LY G ++KV ++L ++K + P DV TYN+ + A D E EK F EL
Sbjct: 127 AFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGMEKIFEEL 186
Query: 141 KKTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + D ++ TL + + L +KA + LKEME+ +NR AY L+S Y +G
Sbjct: 187 SADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEEGDVFRNRSAYDILISQYGAVGD 246
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
++ V R+W+K+ S +++ Y VI + KLG EKAE +Y G R N
Sbjct: 247 QEGVERVWEKVKS-GPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLILSRQFNS 305
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS- 318
LL+AY + +E AE +V G K T+ L GYLK Q++K L K+A G
Sbjct: 306 LLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHLVTGYLKTDQLDKALAVMKEAQGDS 365
Query: 319 ----VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKA 373
R WV + AY E+GD+ AE ++ A + ++YN LL+ Y K+
Sbjct: 366 KQGRSRLWVETLISVLDAY---AERGDVISAEKQFQDIKKAYPRPNIQVYNILLKAYIKS 422
Query: 374 GKMPLIIVERMQKDNVQMDAETQKVL 399
L ++RM D + + ET +L
Sbjct: 423 RVPALGFLQRMLADKLVPNEETLNLL 448
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 195/376 (51%), Gaps = 11/376 (2%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A ENFF LP + T ALL+ Y + +A + + M E G++ L +N+++ L
Sbjct: 113 AAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYV-TNLAFNNVMTL 171
Query: 90 YISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDP 147
++ G+ KVPQ+++ +KK T P TY++W+ +CAS ND AE+ + E+K + +
Sbjct: 172 FMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQI 231
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YS L S+Y+K + EKA LK +E++ K R AY LL LY G EV R+W
Sbjct: 232 GWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVW 291
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ S+ + + + Y ++S+L +L + E + EWE+ + D R+ ++ ++A++N+
Sbjct: 292 DSLKSV-SPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLVSVCVSAHLNQ 350
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPD 325
N LE AE + + P + E +LKK +++ + + A+ V+ KW P
Sbjct: 351 NMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGDKWRPS 410
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQ 385
+++ A + EE+ D+DG + + + +S +++ A K I M+
Sbjct: 411 PQVVGAFFKYYEEETDVDGVDEFSKIFK-----ANNFDDSWIKSCITASKSSPEIDPGMK 465
Query: 386 KDNVQMDAETQKVLKI 401
+D+ A ++L I
Sbjct: 466 EDSQVYHAHETRLLDI 481
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 191/384 (49%), Gaps = 24/384 (6%)
Query: 3 RRRPHGAQVRAQSYRQR--------VAQAQALQTRAR-----ENFFENLPDKMRGPDTCS 49
RR H QV +R +A+ L ++ R E +F +PD +
Sbjct: 68 RRFTHALQVLEWMSNERNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYA 127
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
ALL Y ++K EAEA+++K+ E + N ML LY G+ +K+ +++QE+K+
Sbjct: 128 ALLRCYAEHKSVEEAEAVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEK 187
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP----DWISYSTLTSLYIKMELP 165
+ TY + L A D + EK ++++ +DP DW +Y T + Y K+
Sbjct: 188 DICNAGTYTIRLNAYVIATDIKGMEKLLMQME---VDPMATVDWYTYMTAANGYRKVHNF 244
Query: 166 EKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EK A LK+ E K R+AY S+ ++Y +G KDEV R+W M K + Y
Sbjct: 245 EKVAAMLKKSEHVARGKTKRLAYESIQTMYAIIGNKDEVHRLWN--MCTSPKKPNKSYIR 302
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++SSLVKL + + AE I +EWES+ D R+PN++++AY Q + AE++ RL+ G
Sbjct: 303 MLSSLVKLDDIDGAEKILEEWESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGG 362
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRLITAAYNKLEEQGDID 343
TW+ L GY ME ++ KKA+ + + PD + A L+E+GD+D
Sbjct: 363 KHLDGRTWDRLACGYNAGNDMENAVQAMKKAVSTNLAGRRPDPFTLVACVKYLKEKGDLD 422
Query: 344 GAEHLLVTLRNAGHVSTEIYNSLL 367
A +L H+S Y+ L+
Sbjct: 423 LALEILKLCIENSHISVTSYDGLV 446
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 177/342 (51%), Gaps = 12/342 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F +PD +ALL Y ++K EAEA+M+ + E + N ML LY
Sbjct: 110 ERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAEAVMKXIKELHPVNITPCCNMMLELYA 169
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP-DWI 150
G+ +K+ +++QE+K+ + TY + L A D + EK ++++ + DW
Sbjct: 170 KKGKYEKLDRLMQEMKEKDICNASTYTIRLNAYVVVTDIKGMEKLLMQMEADPVATVDWY 229
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN--RVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y T + Y ++ EK A LK+ E R N R+A+ S+ ++Y +G KDEV R+W
Sbjct: 230 TYMTAANGYRRVHNFEKVAEMLKKSE-HLARGNTRRLAFESIQTMYAIIGNKDEVYRLWN 288
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
SL K N++ Y ++SSL KL E + AE I +EWES D R+PN++++AY
Sbjct: 289 MCTSL-KKPNNSSYIRMLSSLAKLDEIDGAEKILEEWESKYANFDVRIPNLMISAYCKWG 347
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSVRKWVP 324
Q + AE++ RL+ G + TW+ L GY MEK ++ KKA+ G R P
Sbjct: 348 QFDKAEAYIRRLLDGGKQLDGRTWDRLACGYKAGNDMEKAVQAMKKAVSKNLGGRR---P 404
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSL 366
D + A L+E+GD+D A +L H+S Y+ L
Sbjct: 405 DPFTLVACVKYLKEKGDLDLALEILKLCIENSHISVTSYDGL 446
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 185/374 (49%), Gaps = 3/374 (0%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A EN+F NLPD + T +LL Y K +A L +M E G LP N++++L
Sbjct: 135 AAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKATNLYRQMDELGIWSSTLPINNLMSL 194
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ Q KV + +E+K KN P+ +T + + + A+ N + E+ E+ + +
Sbjct: 195 YMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTSYAALNKIDDIEELLKEMVEKDVTLG 254
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
W +YSTL S+Y+ KA + LK++E + +R + LLSLY ++G EV R+W
Sbjct: 255 WSAYSTLASIYVNAGQFGKAESALKKLEGLISAHDDRQPFDFLLSLYASLGNLSEVNRVW 314
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ S F+K+ + Y ++ +L KL + ++ + IY EWES T D ++ N+++ +++
Sbjct: 315 NVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQIYMEWESNYETFDVKLTNMMIRSHLKV 374
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DH 326
E AE ++ G + T EL Y+ M L + +K D
Sbjct: 375 GMTEEAEMLVEKVKENGAEFDTKTCELFLDHYMGTEDMNSALNWLENMTKLSKKAEKLDQ 434
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
I EE D DGAE LR G + + Y SLLRTY AGK + ++++
Sbjct: 435 DRIYKFQKYFEEHKDADGAERFCNCLRTLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKN 494
Query: 387 DNVQMDAETQKVLK 400
D V++ + K+LK
Sbjct: 495 DKVEICYDIGKLLK 508
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
+V +++ E+K K S D +YN+WL+ SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K+ EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y L + Y+ ++ +KA T +++M + + Y+ +++LY + DEV + +M
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEELVSEMK 70
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
++ Y +S+ G E E ++ E + DPR
Sbjct: 71 QKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDL-----DPR---------------- 109
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV--RKWVPDHRLI 329
I P +TT+ + Y K GQ+EK +C + + R +P H L+
Sbjct: 110 -------------IIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLL 156
Query: 330 TAAYNKLEEQGDI 342
+ Y L +G++
Sbjct: 157 -SLYGSLGNRGEV 168
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 135/224 (60%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A S E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A + E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 183/351 (52%), Gaps = 12/351 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN+F N+ ++ ALL+ Y K +AEA+M+++ + GF++ L YN ++N+Y
Sbjct: 136 ENYFNNIHKNLKTYQVYIALLNCYALEKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYY 195
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
G +K+ ++ E++ K D T + L+A A+ ++ + ++ +I DW
Sbjct: 196 RMGNWEKLDILMHEMEEKGIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMESDPRIILDW 255
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIW- 207
SY+ + Y+K+ L +K +K++E+ + + VA+ +LL LY +DE+ R+W
Sbjct: 256 NSYAVVAHGYLKVGLVDKTLVMMKKLEELIDAKGSNVAFDNLLKLYAETRQRDELDRVWM 315
Query: 208 --KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
KK ++ K Y +ISSL+K + + AE + +EWES + D RVPN L+ AY
Sbjct: 316 LYKKKEKIYNK----GYMAMISSLLKFDDIDAAEKVLEEWESRRLSYDFRVPNFLIDAYC 371
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVP 324
+ E AE+ N+++TKG P TW L GYL+ Q+ K +E KKA+ W P
Sbjct: 372 RKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALKKAVVVCPPNWKP 431
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
+ LE D++GA + L+N G S + LL +Y + GK
Sbjct: 432 SKNTLATCLEYLEGNRDVEGAGEFIRFLQNEGIFSVGVCKRLL-SYIENGK 481
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++YV K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
++Y K+ EKA L+ +E R ++R+ Y L+SLY ++G + EV R+W S+F
Sbjct: 121 AAMYSKLGQLEKAEQCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTMAAMYS 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H LI+ Y L +G++
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLIS-LYGSLGNRGEV 168
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 135/224 (60%), Gaps = 2/224 (0%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD ++ ALL++Y K +AE LME+M G+ PLPYN M+ LY+ +LD
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTL 155
KV +++ E+K K S D +YN+WL+A SQ E+ E+ F E+ +I P+W ++ST+
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S+Y K EKA L+ +E R ++R+ Y LLSLY ++G + EV R+W S+F
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + Y VISSLV+ G+ E AE +Y+EW + + DP++ N+
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
K+ Y +LL+ Y +D+ + ++M + + Y +++ +KL E +K E +
Sbjct: 6 KDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIKPCYTTWELLTWGYL 300
E + + D NI L+A ++ E E + + + I P +TT+ + Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 301 KKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDI 342
K GQ+EK +C + + R +P H L++ Y L +G++
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLS-LYGSLGNRGEV 168
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 143/254 (56%), Gaps = 3/254 (1%)
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK-NRVAYSSLLSLYTNMGYKDEVLRIW 207
W SY+T+ + ++ + E+A +E EK+ +K NRVAY LL++Y ++G EV RIW
Sbjct: 111 WHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVDRIW 170
Query: 208 KKMMS-LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
S + A ++ Y C IS L+K+ + AE Y+EWES D R+ N+LL AY
Sbjct: 171 DVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTAYCK 230
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPD 325
+E AE+ ++ V KG P TW L GY K GQ K + KKA+ S +W+PD
Sbjct: 231 EGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALASASNEWIPD 290
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQ 385
+ + N EQ +++ AE ++ L+ + +IY+ LL+TY AGK ++ RM+
Sbjct: 291 LTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLRRMK 350
Query: 386 KDNVQMDAETQKVL 399
KD ++ D ET+K+L
Sbjct: 351 KDGMEADEETEKIL 364
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 187/366 (51%), Gaps = 8/366 (2%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F +LPD + T S+LLH Y ++K + +A L EKM + L Y ++++L
Sbjct: 123 AAEEYFLSLPDMYKSVKTYSSLLHCYAEHK-AEKALELYEKMRTMNIVPNTLVYKNLMSL 181
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ GQ +K+ Q +E++ N D TY + + N E+ EK FLE + I
Sbjct: 182 YLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTESHIMLNGLESTEK-FLEDLEKSIPVH 240
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
W Y+ L Y K+ +KA TLK+ E+ R A+ +LLSLY + G EV R+W
Sbjct: 241 WSLYTRLADSYNKVGQFDKAGLTLKKAEEVMDRGEMFAWHNLLSLYASSGNLSEVKRVWS 300
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ S ++ Y ++S+L KL +F+ + ++ EWE + D R+PN+++ AY+ ++
Sbjct: 301 SLRSELKISSNRSYLVMLSALKKLDDFDCMQQVFQEWELTQESYDMRIPNVMIKAYLAKD 360
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDH 326
+ AE+ + +G T + + T YL+K + E LE ++ A V+ W P
Sbjct: 361 MTDEAEALRQTAMAQGHSNPLTFY-IFTESYLEKSRTEAALEVWRDAGKMVKTPNWAPPP 419
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIV--ERM 384
L+ EE D+DG E L + T+ ++L RTY AG+ L V ++
Sbjct: 420 ELVKRFLKHFEEAKDVDGMESFCACLEKLECLDTDARDALSRTYVAAGRKNLSSVAHHQI 479
Query: 385 QKDNVQ 390
++D+++
Sbjct: 480 EEDSIE 485
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 174/328 (53%), Gaps = 12/328 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++F+N+P +++ ALL+ Y K +A A M+K+ E GF PLPYN M+NLY
Sbjct: 117 EDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYH 176
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
G+ +++ +L+E+K + D TY++ ++A A+ +D EK +++ I DW
Sbjct: 177 QIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDW 236
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEK--RTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
Y + Y K+ L +K+ + LK+ E +K A++ L LY G KDE+ RIW
Sbjct: 237 NCYVIAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIW 296
Query: 208 KKMMSLFA--KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+L+ K+ + + +I+SL+ L + + AE IY EWE+ + D R+PN+L+ AY
Sbjct: 297 ----NLYKKEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYC 352
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+E AE N +V K +W L GYL+K Q+ + +E K A +
Sbjct: 353 RAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNY 412
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLR 353
+ I AA+ L+ + D++ E ++ LR
Sbjct: 413 VKEILAAF--LDGKQDVEETEKVVNLLR 438
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 182/377 (48%), Gaps = 60/377 (15%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +F P+ +R ALL+ Y Q K +AEA+M++M + GF+K L YN ML LY
Sbjct: 123 EKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVKT-LSYNVMLGLYS 181
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDW 149
G+ +K+ ++QE+++N D TY + L A + +D E EK ++L+ ++ DW
Sbjct: 182 RLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDW 241
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y + Y+K +L EKA LK
Sbjct: 242 NAYIVAANGYLKADLKEKAVEMLK------------------------------------ 265
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+SL+KL + + AE ++EW S + D RVPN+L+ AY +
Sbjct: 266 -----------------NSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGL 308
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSVRKWVPDHRL 328
LE AE +R + +G +P TW+ L GY + QMEK ++ KKA + + + W P+
Sbjct: 309 LEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPVT 368
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNS-LLRTYAKAGKMPLIIVERMQKD 387
++A L+ +GD++ AE+L+ LR VS Y+S L Y ++ + + +M D
Sbjct: 369 LSACLEYLKGKGDVEEAENLIRLLREQSLVSA--YDSDRLVNYIRSEEPGSSTIAQMLWD 426
Query: 388 NVQMDAETQKVLKITSE 404
+ +DAET V+ + E
Sbjct: 427 HEDLDAETDGVVDLKQE 443
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 140/262 (53%), Gaps = 4/262 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +FE LP + +T +ALLHSY K + +AE L E++ E L YN M+ L
Sbjct: 130 AAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTL 189
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+S GQ++KV +++ELK+ PD+ TYNLW+++CA+ D + + E+ D
Sbjct: 190 YMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSAND 249
Query: 149 -WISYSTLTSLYIKM-ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
W+ Y L ++YI L A+ ++ E T +++ + Y L+ LY +G KD++ +I
Sbjct: 250 GWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQRDWITYDFLIILYAGLGNKDKIDQI 309
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYI 265
WK + K+ Y C++SS V LG + + DEW+ + T D V LL A+
Sbjct: 310 WKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTTDFDISVFYRLLDAFA 369
Query: 266 NRNQLEMAESFYNRLVTKGIKP 287
+E AE+F+ L+ K P
Sbjct: 370 ELRLIEEAETFHKLLIRKSCLP 391
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 9/260 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP + + + +ALLHSY ++K + +AE L E+M + L YN M+ L
Sbjct: 154 AAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDKAERLFERMKDADLSIDVLVYNEMMTL 213
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKVP + +ELK+ N SPD+ TYNL ++A A+ D E + E+ K DP+
Sbjct: 214 YISVGELDKVPAVAEELKRQNVSPDLFTYNLRISASAASMDLEIFKGILDEMSK---DPN 270
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W Y L ++Y+ + +L E E + ++ + Y L+ L+T +G + V
Sbjct: 271 SNEGWTLYRNLATIYVNASQLVSSGNSLVEAEAKISQREWITYDFLILLHTGLGNLERVK 330
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M +M Y CV+SS + G+ + A+ I D+W+ S + D N L A
Sbjct: 331 DIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDAKEIVDQWQRSKAPEFDISACNRLFDA 390
Query: 264 YINRNQLEMAESFYNRLVTK 283
+ + A+SF ++ K
Sbjct: 391 LLGAGFTDTADSFRELMLQK 410
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 176/356 (49%), Gaps = 17/356 (4%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
+A E +F ++PD + T S LL+ Y ++ + + EKM + L YN+++
Sbjct: 135 QAAEEYFWSIPDISKSVKTYSCLLNCYGKHGLAYKGLEFYEKMKAKSIVPDKLVYNYLMI 194
Query: 89 LYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
LY GQ +K+ +E++++ S D Y + + + ND + AEK EL+K + P
Sbjct: 195 LYQKAGQPEKILSTFEEMRESGISADKFAYFTLIESYITMNDLDAAEKVLAELQK--VAP 252
Query: 148 -DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
W Y+ + + YIK++L KA +K+ E+ + + ++ +LLSL+ + G EV R+
Sbjct: 253 VHWSLYTLMANNYIKLKLFGKAEVAIKKAEEGMDKADLRSWYALLSLHAHCGNSTEVKRV 312
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
WK + S F K + Y ++ +L + +FE + I+ EW+S D R+ N+++ AY++
Sbjct: 313 WKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQQIFQEWQSSHEHYDKRIANVVIKAYLD 372
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWE-----LLTWGYLKKGQMEKVLECFKKAIGSV-- 319
+ ++ AE+ + +G W + YL K + LE + A V
Sbjct: 373 KGMIDEAEAIRQSTMAQG------HWHEGMVCIFAEFYLDKSDVNAALEILRDAKNMVMA 426
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
RKWVP L++ EE D GAE L L+ + + + + +TY AG+
Sbjct: 427 RKWVPSKELVSRFLKHYEESNDASGAESFLECLKKLECLDLDAFEAAKQTYVVAGR 482
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 140/264 (53%), Gaps = 4/264 (1%)
Query: 86 MLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAF-LELKKT 143
+L+ Y+ +KV ++ +K+N +V++YNLW+ ACA + ++ + F + L
Sbjct: 183 LLHCYVMERDHEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDE 242
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ W +Y TL +++ K L +A L + E + R+ YS +++ Y + D V
Sbjct: 243 TVKVGWSTYCTLANIFRKNGLNTEAQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGV 302
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+R+W+ S+ ++ A Y +S +K+G+ +AE I+ +WE+ D RV N+LL A
Sbjct: 303 MRMWEASKSVPGRILTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGA 362
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--K 321
Y+ +E AE + ++ KG P Y TWE+L GY++ QM+K + C KK + ++
Sbjct: 363 YVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLKSCH 422
Query: 322 WVPDHRLITAAYNKLEEQGDIDGA 345
W P L+ A EEQG D A
Sbjct: 423 WRPPVELMEAIGKHFEEQGSADDA 446
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 9/260 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP ++ + +ALLHSY ++K + +AE L ++M + L YN M+ L
Sbjct: 162 AAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTL 221
Query: 90 YISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKVP + +ELK+ SPD+ TYNL ++A A+ D E + E+ K DP+
Sbjct: 222 YISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSK---DPN 278
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W Y L +Y+ + +L E E + R+ + Y L+ L+T +G +D +
Sbjct: 279 SNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVILHTGLGNRDRIK 338
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M+ +M Y CV+SS + G+ + A + D+W+ S + D N L A
Sbjct: 339 DIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDA 398
Query: 264 YINRNQLEMAESFYNRLVTK 283
++N + A SF ++ K
Sbjct: 399 FLNAGFTDTANSFRELMLQK 418
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 145/266 (54%), Gaps = 4/266 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +FE LP ++ +T +ALLHSY K+ +AE L E++ L YN M+ L
Sbjct: 160 AAERYFEGLPITVKTSETYTALLHSYAGVKQLGKAEELYERIKGSNLSFTALTYNEMMTL 219
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDP 147
Y+S GQ++KV +++ELK+ +PD+ TYNLW+++CA+ + + + E+K + +
Sbjct: 220 YMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWISSCAAILNIDQVTRILDEMKHDSGCND 279
Query: 148 DWISYSTLTSLYIKM-ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
DW+ Y + ++Y+K L ++ + E EK ++ + Y L+ LY + KD+V +I
Sbjct: 280 DWLRYIDIANIYVKAGHLVNTESSAVVEAEKSITQREWITYDFLIILYAGLRDKDKVDQI 339
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYI 265
WK + KM + + C++SS + LG ++A + D+W+ + T D + LL A+
Sbjct: 340 WKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAGEVLDQWKKSTTTDFDLSACSRLLDAFS 399
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTT 291
E+A F+ L+ + P T
Sbjct: 400 GSGLTEIANDFHMLLIERNCDPTNLT 425
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 9/260 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP ++ + +ALLHSY ++K + +AE L ++M + L YN M+ L
Sbjct: 203 AAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTL 262
Query: 90 YISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKVP + +ELK+ SPD+ TYNL ++A A+ D E + E+ K DP+
Sbjct: 263 YISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSK---DPN 319
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W Y L +Y+ + +L E E + R+ + Y L+ L+T +G +D +
Sbjct: 320 SNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVILHTGLGNRDRIK 379
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M+ +M Y CV+SS + G+ + A + D+W+ S + D N L A
Sbjct: 380 DIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDA 439
Query: 264 YINRNQLEMAESFYNRLVTK 283
++N + A SF ++ K
Sbjct: 440 FLNAGFTDTANSFRELMLQK 459
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 9/260 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP ++ + +ALLHSY ++K + +AE L ++M + L YN M+ L
Sbjct: 24 AAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTL 83
Query: 90 YISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKVP + +ELK+ SPD+ TYNL ++A A+ D E + E+ K DP+
Sbjct: 84 YISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSK---DPN 140
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W Y L +Y+ + +L E E + R+ + Y L+ L+T +G +D +
Sbjct: 141 SNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVILHTGLGNRDRIK 200
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M+ +M Y CV+SS + G+ + A + D+W+ S + D N L A
Sbjct: 201 DIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDA 260
Query: 264 YINRNQLEMAESFYNRLVTK 283
++N + A SF ++ K
Sbjct: 261 FLNAGFTDTANSFRELMLQK 280
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 139/260 (53%), Gaps = 9/260 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP ++ + +ALLHSY ++K + +AE L ++M + L YN M+ L
Sbjct: 162 AAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTL 221
Query: 90 YISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKVP + +ELK+ SPD+ TYNL ++A A+ D E + E+ K DP+
Sbjct: 222 YISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSK---DPN 278
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W Y L +Y+ + +L E E + ++ + Y L+ L+T +G +D +
Sbjct: 279 SNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISQREWITYDFLVILHTGLGNRDRIK 338
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M+ +M Y CV+SS + G+ + A + D+W+ S + D N L A
Sbjct: 339 DIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDA 398
Query: 264 YINRNQLEMAESFYNRLVTK 283
++N + A SF ++ K
Sbjct: 399 FLNAGFTDTANSFRELMLQK 418
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 6/327 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
EN F + P + T +LL+ Y + +A + +KM E G+L L + +++++Y+
Sbjct: 177 ENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKALSHFDKMDEFGYL-TSLSFTNLMSMYM 235
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP-DW 149
Q KVPQ++ +K + TY LW+ +CA+ ND E+ + E+K+ D DW
Sbjct: 236 RLSQPSKVPQLVNVMKERKIRMTEFTYILWMNSCAALNDLGEVERVYEEMKREDEDKIDW 295
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L ++YIK EKA LK++E + R Y LLSLY G EV R+W
Sbjct: 296 KTYSNLAAIYIKAGFFEKAELMLKKVEGVMKPRQRETYHFLLSLYAGTGNVKEVYRVWGT 355
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + N + Y ++S+L +L + E ++ EWES + D R+ + + AY+++N
Sbjct: 356 LKKITPVTNRS-YLIMLSNLRRLNDMEGIIKLFKEWESRHVSYDSRLVGVAVQAYLSQNM 414
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHR 327
+ A + + P + E+ L+KGQ++ + + A+ S K+ P +
Sbjct: 415 DKEAVLVFEEALKSCRGPFFRIREMFMASLLEKGQLDGAMSHLEAALSEASDYKYQPSPQ 474
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRN 354
+++A EE+ D+DG + L LR+
Sbjct: 475 VVSAFLKYYEEETDLDGVDELSKILRS 501
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 9/260 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP + + +ALLHSY ++K + +AE L E+M + L YN M+ L
Sbjct: 147 AAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDKAERLFERMKDANLSMDALVYNEMMTL 206
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKV + +ELK+ N SPD+ TYNL ++A A+ D E + E+ K DP+
Sbjct: 207 YISVGELDKVEIIAEELKRQNVSPDLFTYNLRVSAAAASMDLEGFKGILDEMSK---DPN 263
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W Y L S+Y+ + +L E E + ++ + Y L+ L+ +G ++ +
Sbjct: 264 SKEGWTLYRNLASVYVDASQLVGSGNSLVEAEAKISQREWITYDFLVILHAGLGNQERIK 323
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M+ +M Y CVISS + G+ + A I D+W+ S + D N LL A
Sbjct: 324 DIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDAGEIVDQWQRSKAPEFDISACNRLLDA 383
Query: 264 YINRNQLEMAESFYNRLVTK 283
++ + A+ F ++ K
Sbjct: 384 LLSAGLTDTADRFRELMLQK 403
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 139/260 (53%), Gaps = 4/260 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +FE LP + +T +ALLHSY K + +AE L +++ + L YN M+ L
Sbjct: 131 AAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSNLSFDALTYNEMMTL 190
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDP 147
Y+S GQ +KVP +++ELK+ SPD+ TYNLW++ CA+ + + + E+ +
Sbjct: 191 YMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEVRRILDEMSHGAGSNE 250
Query: 148 DWISYSTLTSLYIKM-ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
WI Y L ++YI + L ++ TL E EKR ++ + Y L+ LY +G KD++ +I
Sbjct: 251 SWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLGSKDKLDQI 310
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAAYI 265
W + KM Y C+ISS + LG ++ + D+W +S + D ++ A+
Sbjct: 311 WNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQWKQSTTTDFDMLACKKIMVAFR 370
Query: 266 NRNQLEMAESFYNRLVTKGI 285
+ E+A + L+ K +
Sbjct: 371 DMGLAEIANNLNMILIEKNL 390
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 141/266 (53%), Gaps = 4/266 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
Q A E +FE LP + +T +ALLHSY K + +AE L +++ + L Y
Sbjct: 129 QVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSNLSFDALTY 188
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N M+ LY+S GQ +KVP +++ELK+ SPD+ TYNLW+++CA+ + + + E+
Sbjct: 189 NEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDEVRRILDEMSH 248
Query: 143 -TKIDPDWISYSTLTSLYIKM-ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ WI Y L ++YI + L ++ TL E EKR ++ + Y L+ LY +G K
Sbjct: 249 GAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLGSK 308
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNI 259
D++ +IW + KM Y C+ISS + LG ++ + D+W +S + D
Sbjct: 309 DKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVIDQWKQSTTTDFDMLACKK 368
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGI 285
+L A+ + E+A + L+ K +
Sbjct: 369 ILVAFRDIGLAEIANNLNVILIEKNL 394
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 141/261 (54%), Gaps = 6/261 (2%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +F+ LP + +T +ALLHSY K +AE +++ L YN M+ L
Sbjct: 94 AAERYFDGLPLAAKTTETYTALLHSYAAAKLIEKAEEFYKRIKGSNLPFTALMYNEMMTL 153
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDP 147
Y+S GQL+KV Q+++ELK + +PD+ TYNLW+++CA+ + + + E+ + + ++
Sbjct: 154 YMSVGQLEKVSQVVEELKHQKVAPDIFTYNLWISSCAAALNIDKVRRILDEMSQDSGVND 213
Query: 148 DWISYSTLTSLYI---KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
DW+ Y + ++Y+ + E + + E EK+ ++ + Y L+ LY +G KD++
Sbjct: 214 DWMRYIKIVNIYVTAGHLVNAESSTAAVVEAEKKITQREWITYDFLVILYAGLGKKDKID 273
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAA 263
+IWK + KM + C++SS + LG ++ I D+W +S + D N LL A
Sbjct: 274 QIWKSLRMTNQKMTSRNFVCILSSYLMLGHLKEVGEIVDQWKQSTTTDFDISACNRLLDA 333
Query: 264 YINRNQLEMAESFYNRLVTKG 284
E+A +F+ L+ +
Sbjct: 334 ISCLGLTEIANNFHMLLIERN 354
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 134/261 (51%), Gaps = 9/261 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP + + +ALLHSY ++K +AE L ++M + L YN M+ L
Sbjct: 151 AAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPIDVLVYNEMMTL 210
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKVP + +ELK+ N SPD+ TYNL ++A + D E + E+ K DP+
Sbjct: 211 YISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGILDEMSK---DPN 267
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W+ Y L S+Y+ + +L E E + ++ + Y L+ L+ +G D V
Sbjct: 268 SNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHAGLGNLDRVK 327
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M +M Y CV+S+ + G+ + A + D+W+ S D N L A
Sbjct: 328 DIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVVDQWQRSKVPEFDVSACNRLFDA 387
Query: 264 YINRNQLEMAESFYNRLVTKG 284
+ + A+SF ++ K
Sbjct: 388 LLAAGFTDTADSFRELMLQKS 408
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 134/261 (51%), Gaps = 9/261 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP + + +ALLHSY ++K +AE L ++M + L YN M+ L
Sbjct: 151 AAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPIDVLVYNEMMTL 210
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
YIS G+LDKVP + +ELK+ N SPD+ TYNL ++A + D E + E+ K DP+
Sbjct: 211 YISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGILDEMSK---DPN 267
Query: 149 ----WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
W+ Y L S+Y+ + +L E E + ++ + Y L+ L+ +G D V
Sbjct: 268 SNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHAGLGNLDRVK 327
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPRVPNILLAA 263
IWK M +M Y CV+S+ + G+ + A + D+W+ S D N L A
Sbjct: 328 DIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKVPEFDVSACNRLFDA 387
Query: 264 YINRNQLEMAESFYNRLVTKG 284
+ + A+SF ++ K
Sbjct: 388 LLAAGFTDTADSFRELMLQKS 408
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 142/257 (55%), Gaps = 5/257 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC-PLPYNHMLN 88
A E +FE L + +T ++LLH+Y +K++ AEAL +++ E L + YN M+
Sbjct: 142 AAERYFEGLHIDAKTTETYTSLLHAYAGSKQTERAEALFKRIIETDSLSFGAITYNEMMT 201
Query: 89 LYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKID 146
LY+S GQ++KVP+++Q LK K SPD+ TYNLWL++CA+ + + + E++ +
Sbjct: 202 LYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLWLSSCAATFNIDELRRILEEMRHDASSN 261
Query: 147 PDWISYSTLTSLYIKMELPEKA-ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
W+ Y LTS+YI A +T+ E EK ++ + Y L+ L+T +G K + +
Sbjct: 262 EGWVRYINLTSIYINSSRVTNAESTSPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQ 321
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAAY 264
IWK + + K++ Y CV+SS + LG +AE I +W ES + D +L A+
Sbjct: 322 IWKSLGNTNQKLSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAF 381
Query: 265 INRNQLEMAESFYNRLV 281
+ +A F+ LV
Sbjct: 382 RDVGLEGVASGFHLLLV 398
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 139/262 (53%), Gaps = 4/262 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +FE LP + +T +ALLHS+ +K + +AE L EKM E LP+N M+ L
Sbjct: 142 AAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKMKESDIPLTALPFNEMMTL 201
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDP 147
Y S GQ++KV ++ +LK+ PD+ TYNLW+++ A+ + + ++ E+ +
Sbjct: 202 YTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVKQILNEMNHNPNSNE 261
Query: 148 DWISYSTLTSLYIK-MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
+W+ Y L ++Y+K L + ++ E ++ + Y L+ LY +G KD++ +I
Sbjct: 262 NWVRYIELVNIYVKSANLLHSESNSVVESVSGISQREWITYDLLIILYAGLGNKDKIDQI 321
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAAYI 265
W+ + KM Y C++S + L + ++ + D+W +S + D N L+ A+I
Sbjct: 322 WRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDFDISSCNRLVNAFI 381
Query: 266 NRNQLEMAESFYNRLVTKGIKP 287
E A SF N L+ K +P
Sbjct: 382 EAGLHEKANSFVNVLIQKNCEP 403
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 152/290 (52%), Gaps = 11/290 (3%)
Query: 3 RRRPHG-----AQVRAQSYRQRVAQ-AQALQTRARENFFENLPDKMRGPDTCSALLHSYV 56
RR H +++ Y R+ ++ A E +FE L + +T ++LLH+Y
Sbjct: 101 RRYKHALEHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYA 160
Query: 57 QNKKSAEAEALMEKMSECGFLKC-PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDV 114
+K++ AEAL +++ E L + YN M+ LY+S GQ++KVP++++ LK K SPD+
Sbjct: 161 ASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDI 220
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
TYNLWL++CA+ + + K E++ + W+ Y LTS+YI A +TL
Sbjct: 221 FTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLP 280
Query: 174 -EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
E EK ++ + Y L+ L+T +G K + +IWK + + ++ Y CV+SS + L
Sbjct: 281 VEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLML 340
Query: 233 GEFEKAENIYDEW-ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
G +AE I +W ES + D +L A+ + +A F+ LV
Sbjct: 341 GHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILV 390
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL- 213
L S ++ LP+++ATT+ +EK N++ + L + E+ R + +L
Sbjct: 57 LKSRIFRLRLPKRSATTV--LEKWIGEGNQMTINELREI------SKELRRTRRYKHALE 108
Query: 214 --FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+K++DA+Y I + K+ + AE ++ + S T + LL AY Q E
Sbjct: 109 HEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTS--LLHAYAASKQTE 166
Query: 272 MAESFYNRLV-TKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
AE+ + R++ + + T+ + Y+ GQ+EKV E +
Sbjct: 167 RAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIE 209
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 5/257 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC-PLPYNHMLN 88
A E +FE L + +T ++LLH+Y +K++ AEAL +++ E L + YN M+
Sbjct: 141 AAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMT 200
Query: 89 LYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKID 146
LY+S GQ++KVP++++ LK K SPD+ TYNLWL++CA+ + + K E++ +
Sbjct: 201 LYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSN 260
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLK-EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
W+ Y LTS+YI A +TL E EK ++ + Y L+ L+T +G K + +
Sbjct: 261 EGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQ 320
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAAY 264
IWK + + ++ Y CV+SS + LG +AE I +W ES + D +L A+
Sbjct: 321 IWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAF 380
Query: 265 INRNQLEMAESFYNRLV 281
+ +A F+ LV
Sbjct: 381 RDVGLEGIASGFHLILV 397
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 5/257 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC-PLPYNHMLN 88
A E +FE L + +T ++LLH+Y +K++ AEAL +++ E L + YN M+
Sbjct: 141 AAERYFEGLHIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMT 200
Query: 89 LYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKID 146
LY+S GQ++KVP++++ LK K SPD+ TYNLWL++CA+ + + K E++ +
Sbjct: 201 LYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSN 260
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLK-EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
W+ Y LTS+YI A +TL E EK ++ + Y L+ L+T +G K + +
Sbjct: 261 EGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQ 320
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAAY 264
IWK + + ++ Y CV+SS + LG +AE I +W ES + D +L A+
Sbjct: 321 IWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAF 380
Query: 265 INRNQLEMAESFYNRLV 281
+ +A F+ LV
Sbjct: 381 RDVGLEGIASGFHLILV 397
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 133/241 (55%), Gaps = 8/241 (3%)
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
MEL EKA LK+ E R +++V + LLSLY ++G KDEV R+W S+F + +
Sbjct: 1 MELFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLG 60
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +ISSLV++ + E AE +Y+EW S+ + D R+ N+L++ Y+ + + + SF+ +
Sbjct: 61 YHAIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMS 120
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQ 339
G P TTWELL+ G++ + ++ + L C +KA + W P + A +++
Sbjct: 121 EGGGCPNSTTWELLSEGHIAEKRVSEALSCLEKAFMTSDSKSWKPKPIKLAAFLKLCQDE 180
Query: 340 GDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK-DNVQMDAETQKV 398
D++ A+ L+ LR G+ + E Y +L+ + + ER+ D+ MD + +V
Sbjct: 181 DDMESAKVLIELLRKPGYHNDEAYAALISKDEPSNR-----TERIDDVDSENMDDDDSQV 235
Query: 399 L 399
L
Sbjct: 236 L 236
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 68/368 (18%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F+++PD+++ +LL Y + +AE L EKM G + YN M+ LY+ N
Sbjct: 145 YFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMRLYLQN 203
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ+++V M Q ++++ PDV T + +A L+K K
Sbjct: 204 GQVERVHSMHQAMEESGIVPDVSTTHTLVAV----------------LRKKK-------- 239
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
TL + Y+ A +K +E + N S S+Y
Sbjct: 240 -TLVAAYV-------VAEDIKAIENVLEKAN-----SCNSMY------------------ 268
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
C I L+K+ + AE Y+EWES D R+ N+L+ AY ++
Sbjct: 269 ----------MCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDK 318
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDHRLITA 331
AE+ ++ + KG P T L GY K GQ+ K + KKA+ S +W+PD +
Sbjct: 319 AEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNEWIPDLTNVLM 378
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
+ N EQ +++ AE ++ L+ + +IY+ LL+TY AGK ++ RM+KD ++
Sbjct: 379 SLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEA 438
Query: 392 DAETQKVL 399
D ET+K+L
Sbjct: 439 DEETEKIL 446
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +FE LP + +T +ALLHSY K + +AE L +++ + L YN M+ L
Sbjct: 136 AAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTYNEMMTL 195
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDP 147
Y+S GQ++KVP +++ELK +N SPD+ TYNLW+++CA+ + + + E+ +
Sbjct: 196 YMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSHGADSNE 255
Query: 148 DWISYSTLTSLYIKME-LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
W Y L ++Y+ L ++ +L E EKR + + Y L+ LY +G KD++ +I
Sbjct: 256 SWTRYLNLANVYVTASRLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSKDKLDQI 315
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
W + KM + Y+C+IS+ + LG ++
Sbjct: 316 WNSLRMTKQKMINRNYSCIISAYLMLGHVKE 346
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 172/373 (46%), Gaps = 69/373 (18%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
RA E +F+++PD+++ +LL Y + +AE L EKM G + YN M+
Sbjct: 90 RAVE-YFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMR 147
Query: 89 LYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
LY+ NGQ+++V M Q ++++ PDV T + +A L+K K
Sbjct: 148 LYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAV----------------LRKKK--- 188
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
TL + Y+ A +K +E + N S S+Y
Sbjct: 189 ------TLVAAYV-------VAEDIKAIENVLEKAN-----SCNSMY------------- 217
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
C I L+K+ + AE Y+EWES D R+ N+L+ AY
Sbjct: 218 ---------------MCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKE 262
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDH 326
++ AE+ ++ + KG P T L GY K GQ+ K + KKA+ S +W+PD
Sbjct: 263 GLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNEWIPDL 322
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
+ + N EQ +++ AE ++ L+ + +IY+ LL+TY AGK ++ RM+K
Sbjct: 323 TNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKK 382
Query: 387 DNVQMDAETQKVL 399
D ++ D ET+K+L
Sbjct: 383 DGMEADEETEKIL 395
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 172/373 (46%), Gaps = 69/373 (18%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
RA E +F+++PD+++ +LL Y + +AE L EKM G + YN M+
Sbjct: 31 RAVE-YFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMR 88
Query: 89 LYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
LY+ NGQ+++V M Q ++++ PDV T + +A L+K K
Sbjct: 89 LYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAV----------------LRKKK--- 129
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
TL + Y+ A +K +E + N S S+Y
Sbjct: 130 ------TLVAAYV-------VAEDIKAIENVLEKAN-----SCNSMY------------- 158
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
C I L+K+ + AE Y+EWES D R+ N+L+ AY
Sbjct: 159 ---------------MCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKE 203
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDH 326
++ AE+ ++ + KG P T L GY K GQ+ K + KKA+ S +W+PD
Sbjct: 204 GLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNEWIPDL 263
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
+ + N EQ +++ AE ++ L+ + +IY+ LL+TY AGK ++ RM+K
Sbjct: 264 TNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKK 323
Query: 387 DNVQMDAETQKVL 399
D ++ D ET+K+L
Sbjct: 324 DGMEADEETEKIL 336
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 172/373 (46%), Gaps = 69/373 (18%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
RA E +F+++PD+++ +LL Y + +AE L EKM G + YN M+
Sbjct: 62 RAVE-YFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMR 119
Query: 89 LYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
LY+ NGQ+++V M Q ++++ PDV T + +A L+K K
Sbjct: 120 LYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAV----------------LRKKK--- 160
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
TL + Y+ A +K +E + N S S+Y
Sbjct: 161 ------TLVAAYV-------VAEDIKAIENVLEKAN-----SCNSMY------------- 189
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
C I L+K+ + AE Y+EWES D R+ N+L+ AY
Sbjct: 190 ---------------MCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKE 234
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDH 326
++ AE+ ++ + KG P T L GY K GQ+ K + KKA+ S +W+PD
Sbjct: 235 GLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNEWIPDL 294
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
+ + N EQ +++ AE ++ L+ + +IY+ LL+TY AGK ++ RM+K
Sbjct: 295 TNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKK 354
Query: 387 DNVQMDAETQKVL 399
D ++ D ET+K+L
Sbjct: 355 DGMEADEETEKIL 367
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 68/368 (18%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+F+++PD+++ +LL Y + +AE L EKM G + YN M+ LY+ N
Sbjct: 173 YFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMG-MASSYAYNVMMRLYLQN 231
Query: 94 GQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ+++V M Q ++++ PDV T + +A L+K K
Sbjct: 232 GQVERVHSMHQAMEESGIVPDVSTTHTLVAV----------------LRKKK-------- 267
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
TL + Y+ A +K +E + N S S+Y
Sbjct: 268 -TLVAAYV-------VAEDIKAIENVLEKAN-----SCNSMY------------------ 296
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
C I L+K+ + AE Y+EWES D R+ N+L+ AY ++
Sbjct: 297 ----------MCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDK 346
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDHRLITA 331
AE+ ++ + KG P T L GY K GQ+ K + KKA+ S +W+PD +
Sbjct: 347 AEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNEWIPDLTNVLM 406
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQM 391
+ N EQ +++ AE + L+ + +IY+ LL+TY AGK +++RM+KD ++
Sbjct: 407 SLNYFAEQKNVEAAEEMASLLQRLITPTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEA 466
Query: 392 DAETQKVL 399
D ET+K+L
Sbjct: 467 DEETEKIL 474
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 156/350 (44%), Gaps = 59/350 (16%)
Query: 27 QTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
TR+RE + +P K++G +ALL+ Y + K +A A +K+++ G ++ PL +N +
Sbjct: 12 HTRSRE-YANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNIL 70
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ LY Q D E
Sbjct: 71 MYLYF-----------------------------------QTDGEVV------------- 82
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR-VAYSSLLSLYTNMGYKDEVLR 205
DW +Y +K + E A T LK++E + K + +A+ +LL LY G KDE+ R
Sbjct: 83 GDWNTYCVAADRCLKAGIMEMAMTMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDELYR 142
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
IWK K+ + Y +ISSL+ L + E AE ++ +WES + RVPNIL+ AY
Sbjct: 143 IWKSDEKR-DKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLSYYFRVPNILINAYC 201
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
N LE A S + + KG +P W L GYL+ +E KKAI W P
Sbjct: 202 RNNLLEKAGSLIDHAMMKGSEPSADAWYSLASGYLE-------VEAMKKAILVCPGWKPI 254
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
+ + + LE +GD + AE + LR S +N LRTY K K
Sbjct: 255 KETLASCLDHLEGKGDQNKAEEFIELLRTENIFSPVAHNR-LRTYIKGLK 303
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 190/414 (45%), Gaps = 40/414 (9%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNLY 90
E FFE++P R + LL+ Y ++ K+ +AEA +KM E G L P PYN M++LY
Sbjct: 116 EKFFESIPKNARDDSVYTTLLNWYARSDKTLCKAEATFQKMRELGLLSRPSPYNAMMSLY 175
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPD 148
I+ +KV ++L+E+K N D +T N L ++ D EK + + I +
Sbjct: 176 IALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAVCDVTAMEKFLNKWEGINGIKLE 235
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIW 207
W++ + Y++ KA L+ E+ RK+ + AY L+ LY G ++EVLRIW
Sbjct: 236 WLTTLDMAKAYLRARSNGKAIKMLRLTEELADRKSLKSAYDHLMKLYGEAGNREEVLRIW 295
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ ++ Y VI SL+K+ + AE IY WES+S D R+P +L + Y R
Sbjct: 296 NLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVWESLSLEFDIRIPTMLASGYRER 355
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELL-TWGYLKKGQMEKVL-------ECFKKAIGSV 319
E AE N K K LL WG K K L F KA+ V
Sbjct: 356 GMTEKAEKLINSKTIKDRKMNKPVTPLLEQWGDQMKPSDLKCLIKNLRDSNQFSKAL-QV 414
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE--------------IYNS 365
+W+ + R + Y++ D A L +T G E +Y +
Sbjct: 415 SEWMGEKR-VCDLYSE-------DYAARLYLTENVLGLEKAEKYFENIPENMKDYSVYVA 466
Query: 366 LLRTYAKAGK----MPLIIVERMQKDNVQMDAET-QKVLKITSEMPVSEVSSIF 414
LL +YAK+ K M I+ M+++NV D+ T VLK+ + E +F
Sbjct: 467 LLSSYAKSDKNLENMVEEILREMEENNVDPDSITVNYVLKVYAAASKVEAMEMF 520
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 37/162 (22%)
Query: 108 KNTSPDVVTYNLWLAACAS-----QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+N ++ Y++++A +S +N + E+ E+++ +DPD I+ + + +Y
Sbjct: 452 ENIPENMKDYSVYVALLSSYAKSDKNLENMVEEILREMEENNVDPDSITVNYVLKVY--- 508
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM-GYKDEVLRIWK------------- 208
AA+ ++ ME + +Y N+ G K EV +W+
Sbjct: 509 ----AAASKVEAME-------MFMRHWAVEMYGNVAGCKREVHNLWEECKNKKEEKVGDG 557
Query: 209 ----KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
++S KM+D Y VISSL+KL + + AE +Y EW+
Sbjct: 558 KECLNVVSTLLKMDDDGYRTVISSLLKLDDVQGAEKVYGEWK 599
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 191/400 (47%), Gaps = 38/400 (9%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNLY 90
E FFE++P RG ++LL+SY ++ K+ +AEA +KM + G L P+PYN M++LY
Sbjct: 124 EKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLY 183
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPD 148
+ +KV ++L E+K N D VT N L ++ D EK + + I +
Sbjct: 184 SALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLE 243
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIW 207
W + + Y++ KA L+ E+ +K+ + AY L+ LY G ++EVLR+W
Sbjct: 244 WHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVW 303
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
K S + ++ Y VI SL+K+ + AE IY WES+ D R+P +L + Y +R
Sbjct: 304 KLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDR 363
Query: 268 NQLEMAESFYN------RLVTKGIKPCYTTWELLTWGYLKKGQMEKVL-------ECFKK 314
E AE N R + K + P L WG K K L + F K
Sbjct: 364 GMTEKAEKLMNSKTIKDRRMNKPVTPL-----LEQWGDQMKPSDLKCLIKNLRDSKQFSK 418
Query: 315 AIGSVRKWVPDHRLIT------AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE--IYNSL 366
A+ V +W+ + ++ AA L E ++ G E N + +Y +L
Sbjct: 419 AL-QVSEWMGEKQVCNLYLEDYAARLYLTE--NVLGLEEAEKYFENIPENMKDYSVYVAL 475
Query: 367 LRTYAKA----GKMPLIIVERMQKDNVQMDAET-QKVLKI 401
L +YAK+ G M I+ M+++NV D T VLK+
Sbjct: 476 LSSYAKSDKNLGNMVDEILREMEENNVDPDLITVNHVLKV 515
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 191/400 (47%), Gaps = 38/400 (9%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNLY 90
E FFE++P RG ++LL+SY ++ K+ +AEA +KM + G L P+PYN M++LY
Sbjct: 124 EKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLY 183
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPD 148
+ +KV ++L E+K N D VT N L ++ D EK + + I +
Sbjct: 184 SALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLE 243
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIW 207
W + + Y++ KA L+ E+ +K+ + AY L+ LY G ++EVLR+W
Sbjct: 244 WHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVW 303
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
K S + ++ Y VI SL+K+ + AE IY WES+ D R+P +L + Y +R
Sbjct: 304 KLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDR 363
Query: 268 NQLEMAESFYN------RLVTKGIKPCYTTWELLTWGYLKKGQMEKVL-------ECFKK 314
E AE N R + K + P L WG K K L + F K
Sbjct: 364 GMTEKAEKLMNSKTIKDRRMNKPVTPL-----LEQWGDQMKPSDLKCLIKNLRDSKQFSK 418
Query: 315 AIGSVRKWVPDHRLIT------AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE--IYNSL 366
A+ V +W+ + ++ AA L E ++ G E N + +Y +L
Sbjct: 419 AL-QVSEWMGEKQVCNLYLEDYAARLYLTE--NVLGLEEAEKYFENIPENMKDYSVYVAL 475
Query: 367 LRTYAKA----GKMPLIIVERMQKDNVQMDAET-QKVLKI 401
L +YAK+ G M I+ M+++NV D T VLK+
Sbjct: 476 LSSYAKSDKNLGNMVDEILREMEENNVDPDLITVNHVLKV 515
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
E D+M+ P L+ + +K+ ++A + E M E L ++ LY++
Sbjct: 390 LLEQWGDQMK-PSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLE-DYAARLYLTE 447
Query: 94 GQLDKVPQMLQELKK---NTSPDVVTYNLWLAACAS-----QNDKETAEKAFLELKKTKI 145
L L+E +K N ++ Y++++A +S +N ++ E+++ +
Sbjct: 448 NVLG-----LEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNV 502
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
DPD I+ + + +Y A + ++ ME R Y + K EV
Sbjct: 503 DPDLITVNHVLKVY-------AAESKIQAMEMFMRRWAVEVYGDVARC------KREVHN 549
Query: 206 IWKK-----------------MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
+W + +++ KM+D Y VISSL+KL + + E +Y EW+
Sbjct: 550 LWDECKNNKEEEVEDGKKRLPVVTTLLKMDDDGYRTVISSLLKLDDVQGVEKVYGEWKPK 609
Query: 249 SG 250
+G
Sbjct: 610 AG 611
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 165/366 (45%), Gaps = 19/366 (5%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E E +P RG LL + V ++E + +M + GF +N +L LY
Sbjct: 241 EQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPVTQFSFNQLLLLYK 300
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ V M++ K++ P + TY + + A S D E EK ++K I+PD
Sbjct: 301 RLDRKKIADVLAMME--KEDVKPSLFTYKILVDAKGSVGDIEAMEKVIESMEKDSIEPDL 358
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+T+ YI EKA LK ME +KNR A +LL L+ +G D V RIWK
Sbjct: 359 TFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAACKTLLPLHAFLGNSDAVERIWKA 418
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAAYI 265
AE I + KLG+ EKAE ++++ W+++S + N LL Y
Sbjct: 419 CED---NTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSS----KFYNALLKVYA 471
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-P 324
+ N L+ + R+ ++ T + L Y++ G++EK K S++ + P
Sbjct: 472 DHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKAESLVHKL--SIQNHIKP 529
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVER 383
+ + ++GD+ +E + LR +G+ +Y SLL Y A ER
Sbjct: 530 IYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQSLLHAYVHAKAPAYGFRER 589
Query: 384 MQKDNV 389
M+ DN+
Sbjct: 590 MKADNI 595
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 165/366 (45%), Gaps = 19/366 (5%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E E +P RG LL + V ++E + +M + GF +N +L LY
Sbjct: 241 EQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPVTQFSFNQLLLLYK 300
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ V M++ K++ P + TY + + A S D E EK ++K I+PD
Sbjct: 301 RLDRKKIADVLAMME--KEDVKPSLFTYKILVDAKGSVGDIEAMEKVIESMEKDSIEPDL 358
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+T+ YI EKA LK ME +KNR A +LL L+ +G D V RIWK
Sbjct: 359 TFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAACKTLLPLHAFLGNSDAVERIWKA 418
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAAYI 265
AE I + KLG+ EKAE ++++ W+++S + N LL Y
Sbjct: 419 CED---NTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSS----KFYNALLKVYA 471
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-P 324
+ N L+ + R+ ++ T + L Y++ G++EK K S++ + P
Sbjct: 472 DHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKAESLVHKL--SIQNHIKP 529
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVER 383
+ + ++GD+ +E + LR +G+ +Y LL Y +A ER
Sbjct: 530 IYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQVLLHAYVRAKAPAYGFRER 589
Query: 384 MQKDNV 389
M+ DN+
Sbjct: 590 MKADNI 595
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 8/345 (2%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M+KM E GF L +N ++ L+ S G+ +P++L ++K + +P V TYN+ + A+
Sbjct: 162 MKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEAN 221
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+++ E K F +K +++P+ ISY L + L ++ +EK N
Sbjct: 222 EHNLENLVKVFGRMKVAQVEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWST 281
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
LL LY +G + E+ R+W + L + Y I + ++G+ +AE I+ E +
Sbjct: 282 LDVLLMLYGYLGNQKELERVWATIQEL-PSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMK 340
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S G N +++ Y ++ A Y + G KP T+ L G LK G E
Sbjct: 341 STKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAE 400
Query: 307 KVLECFKKAI-----GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-T 360
+ L+ + VR P + E+GD+ E L A + T
Sbjct: 401 QALKTLDLGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYT 460
Query: 361 EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEM 405
+YN+L++ Y KA +++RM + DAET +LKI +
Sbjct: 461 FVYNTLIKAYVKAKIYNPNLLKRMILGGARPDAETYSLLKIAEQF 505
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 130/268 (48%), Gaps = 14/268 (5%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP + + +ALLHSY ++K + AE L E+M + L YN M+ L
Sbjct: 140 AAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDRAERLFERMKDASLPMDALVYNEMMTL 199
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK---KTKI 145
YIS G+L KV + +ELK+ N SPD+ TYNL +A A+ D E E+ K+
Sbjct: 200 YISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEMSRDPKSST 259
Query: 146 DPDWISYSTLTSLYIKME--LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ W Y L S+Y+ L + ++ E R ++ + Y L+ L+ +G + +
Sbjct: 260 EGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQREWITYDFLVILHAGLGRPERI 319
Query: 204 LRIWKKMMS-------LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPR 255
IW+ M++ +M Y CV+SS + G E A + D+W+ S + D
Sbjct: 320 RDIWRSMVATSQSQSQQQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVS 379
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTK 283
N LL A + + A F ++ K
Sbjct: 380 ACNRLLDALLRAGLADAAGRFRELMLQK 407
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 13/363 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + + +P +G LL + V ++E + +M + GF + ML LY
Sbjct: 217 EAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMKDLGFPLSGFTCDQMLLLYK 276
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
I ++ V +++ K+N P ++TY + + + ND E+ +K + PD+
Sbjct: 277 RIDRKKIADVLLLME--KENVKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVQPDF 334
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ + Y L EKA LKEME + NR A+ LLS+Y ++G +DEV RIWK
Sbjct: 335 QTQALTAKHYSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVTRIWKI 394
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S K E I + KL + ++AE I+++ ++ ++LL Y++
Sbjct: 395 CES---KPYFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRASSNTYSVLLRVYVDHKM 451
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHR 327
L + R+ G + TTW+ L Y++ G++EK KA + +
Sbjct: 452 LSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSMLDKASKQSHTKLMMNSFM 511
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKMPLIIVERMQK 386
I Y+K +GD+ E + + +R G+ S + +LL+ Y A + +RM+
Sbjct: 512 YIMDEYSK---RGDVHNTEKIFLKMREVGYTSRLRQFQALLQAYINAKAPAYGMRDRMKA 568
Query: 387 DNV 389
DN+
Sbjct: 569 DNI 571
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 151/290 (52%), Gaps = 4/290 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E FFEN+P M+G S+LL Y + K + +A L+E M E G YN M+N+Y
Sbjct: 124 EVFFENIPKDMKGIAVFSSLLSCYAREKSAEKAAKLVEAMKEAGVSMDTRCYNLMMNMYY 183
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDW 149
K+ ++ E+++N S D T ++ L+A A+ ++ E EK ++ ++ DW
Sbjct: 184 QMNVHGKLDDLMLEMEQNGVSFDQFTLSIRLSAYAAASNIEGIEKTIEKISSMSETAIDW 243
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLLSLYTNMGYKDEVLRIWK 208
YS + ++K+EL ++A LK+ E+ + A+ +LL LY G K+++ R+W
Sbjct: 244 TIYSAAANAFLKVELIDEATMMLKKCEEFVNEDSGNEAFHTLLKLYGETGRKEDLSRVWL 303
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ K+ ++ Y +ISS +K G+ E E ++++WES + D R+PN+L+ Y ++
Sbjct: 304 RFKEE-RKVFNSGYKIMISSALKFGDIELVEKVFNQWESEKLSYDFRIPNLLINFYCEKD 362
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
E AE + + P + L YL+ ++ K E ++A+ +
Sbjct: 363 LTEKAELLLKKAEGNRVSPPMDAYICLANIYLEGDEISKATEAIERAVST 412
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 164/372 (44%), Gaps = 7/372 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E +F ++P MRG LL +Y +AE + +KM GF YN +L LY
Sbjct: 218 EKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFSLTAFEYNQLLLLYK 277
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ V +M+++ + P + TY + + D E+ +K I+ D
Sbjct: 278 RLDKKKIQDVLKMMED--EGVKPTIFTYKILIDVKGWMGDIGGMEQVAENMKSEDIEMDS 335
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ L YI+ L EKA LKE+E + + R LL LY +G EV RIWK
Sbjct: 336 GTLELLARHYIRAGLAEKAEVVLKELENVSLKDKRSRLKMLLPLYAELGKPTEVERIWKD 395
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ F + EY + + KLG+ EKAE +++ + + N LL Y + +
Sbjct: 396 FEA-FPALRLDEYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAKHYNALLNVYADHHL 454
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
L + R+ G W+ L ++ G++EK KA ++ P + +
Sbjct: 455 LLKGKELVKRMSDNGCTIEPPIWDALIRLHVNAGELEKADSILFKACNQ-KQLRPKYWTM 513
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLIIVERMQKDN 388
K E+GD+ AE + +R AG+ S + SLL++YA A ERM+ D
Sbjct: 514 VTILEKYAERGDVANAEKIFDRMRQAGYTGSAGAFASLLKSYANARVPAYGFRERMKADK 573
Query: 389 VQMDAETQKVLK 400
+ ++ +++
Sbjct: 574 IYLNGRLNSLME 585
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 129/268 (48%), Gaps = 14/268 (5%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E+FFE LP + + +ALLHSY ++K + AE L E+M L YN M+ L
Sbjct: 140 AAEDFFEKLPAGAKSLEAYTALLHSYGRSKMTDRAERLFERMKGASLPMDALVYNEMMTL 199
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK---KTKI 145
YIS G+L KV + +ELK+ N SPD+ TYNL +A A+ D E E+ K+
Sbjct: 200 YISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEMSRDLKSST 259
Query: 146 DPDWISYSTLTSLYIKME--LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ W Y L S+Y+ L + ++ E R ++ + Y L+ L+ +G + +
Sbjct: 260 EGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQREWITYDFLVILHAGLGRPERI 319
Query: 204 LRIWKKMMS-------LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-SISGTGDPR 255
IW+ M++ +M Y CV+SS + G E A + D+W+ S + D
Sbjct: 320 RDIWRSMVATSQSQSQSQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVS 379
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTK 283
N LL A + + A F ++ K
Sbjct: 380 ACNRLLDALLRAGLADAAGRFRELMLQK 407
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 8/345 (2%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M+KM E GFL L +N ++ L+ S G+ +P++L ++K + +P V TYN+ + A+
Sbjct: 162 MKKMRELGFLISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEAN 221
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+++ E K F +K ++ P+ ISY L + L ++ +EK N
Sbjct: 222 EHNLENLVKFFSRMKVAQVAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWST 281
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
LL LY +G + E+ R+W + L + Y I + ++G+ +AE ++ E E
Sbjct: 282 LDVLLMLYGYLGNQKELERVWATIREL-PSVRSKSYMLAIEAFGRIGQLNQAEELWLEME 340
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S G N +++ Y + A Y + G KP T+ L G LK G E
Sbjct: 341 STKGLKSVEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKPNAITYRQLALGCLKSGMAE 400
Query: 307 KVLECFKKAI-----GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-T 360
+ L+ + VR +P + E+GD+ E L + + T
Sbjct: 401 QGLKTLDLGLRLTISKRVRNSIPWLETTLSIVEIFAEKGDMGNVERLFEEFHKSKYCRYT 460
Query: 361 EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEM 405
+YN+L++ Y KA +++RM + DAET +LKI +
Sbjct: 461 FVYNTLIKAYVKAKIYDPNLLKRMILGGARPDAETYSLLKIAEQF 505
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 167/369 (45%), Gaps = 26/369 (7%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + E +P+ RG LL + V +AE + KM + F P N +L LY
Sbjct: 244 EVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTPFACNQLLLLYK 303
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L ++N P +T+ + + ND + ++ +++ I+PD +
Sbjct: 304 RTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQIVDQMRAEGIEPDNYT 363
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ L YI +KA LKEME ++NR LL+LY +G DEV R+WK
Sbjct: 364 KAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLALYAKLGMADEVGRVWK--- 420
Query: 212 SLFAKMNDAEYTCV--ISSLVKLGEFEKAENIYD----EWESISGTGDPRVPNILLAAYI 265
+ + CV I + KL + ++AE +++ +W+ S + ++LL Y
Sbjct: 421 --VCETRPSVEDCVAAIEAWGKLKKIDEAEAVFEVMARKWKLTS-----KNCSVLLNVYA 473
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
N L + R+ KG + TW L Y++ G++EK +KAI
Sbjct: 474 NNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAIQQ-----SP 528
Query: 326 HRLITAAYNKLEEQ----GDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLII 380
R I ++YN L E+ GDI +E + ++ AG++S + Y L+ Y +A I
Sbjct: 529 VRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRLKQYQILIEAYRRANVPAYGI 588
Query: 381 VERMQKDNV 389
+R++ DNV
Sbjct: 589 RDRLKADNV 597
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 180/384 (46%), Gaps = 13/384 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E F N+P + +G + L+ + + + A M KM E G L +N ++ L+
Sbjct: 145 EKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVFNRLIILHS 204
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S + +P++L ++K + P V TYN+ + A++++ E + F ++++ K++P+ +
Sbjct: 205 SFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMRRAKVEPNEV 264
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY + + + +L ++ +EK N Y L+ LY + + E+ R W +
Sbjct: 265 SYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILYGYLNKEKELERTW-GI 323
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ F + + I + ++G +AE ++ E ++ G N +L+ Y +
Sbjct: 324 IQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQFNSILSVYCRHGLI 383
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS--------VRKW 322
+ A + ++ G KP T+ L +G LK G +E+ L+ +GS VRK
Sbjct: 384 KKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLD--LGSNTTSSTKIVRKS 441
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIV 381
P + L E+GDI+ E L L+ A + T +YN+L++ Y KA ++
Sbjct: 442 TPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLIKAYVKAKIHNPNLL 501
Query: 382 ERMQKDNVQMDAETQKVLKITSEM 405
RM + D+ET ++K++ +
Sbjct: 502 RRMIVGGARPDSETYSLIKLSEQF 525
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 160/365 (43%), Gaps = 17/365 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + EN+P RG LL + V +AE + KM + GF N +L LY
Sbjct: 230 EKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYK 289
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +L V M++ K+N P + TY L + + D E EK ++ I+PD
Sbjct: 290 RVDKKKLGDVLTMME--KENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDL 347
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +T+ YI EKA L++M +NR A +L LY +G D+V RIW K
Sbjct: 348 LFQATIARHYIFGGYREKAEAILEQMVGDDINENRSACKFVLPLYAFLGKNDDVERIW-K 406
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAAYI 265
+ A+++ E I + KLG+ EKAE I+D W+++S + N +L Y
Sbjct: 407 VCEANARLD--ECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSS----KYYNAMLKVYA 460
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
N+ + + R+ G + T + L Y G++EK K + K P
Sbjct: 461 NKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEKADSILHK-LSYKNKIKPM 519
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERM 384
+ + ++GD+ AE L +R G+ Y LL Y A P ERM
Sbjct: 520 YTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERM 579
Query: 385 QKDNV 389
+ D++
Sbjct: 580 KADDI 584
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 174/361 (48%), Gaps = 8/361 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD T S+LL+ Y +K+ ++A AL+++M E G+ + +++ L++ N + V
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ Q +++ PD+VTY + + D + A +++K KI+ D + Y+T+ K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A EM+ + R + YSSL+S N G + R+ M+ N
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++ +I + VK G+ +AE +YDE S D + L+ + ++L+ A+ + ++
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K P T+ L G+ K ++E+ +E F++ S R V + T + + D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARD 448
Query: 342 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKV 398
D A+ + + + G H + YN LL K GK+ +++ E +Q+ ++ D T +
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 399 L 399
+
Sbjct: 509 M 509
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 146/328 (44%), Gaps = 4/328 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+ ++ + K +A L +M G Y+ +++ + G+ ++L ++ +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +P+VVT++ + A + AEK + E+ K IDPD +YS+L + + + ++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M + C N V YS+L+ + +E + ++++M N YT +I
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ + + A+ ++ + S+ + NILL +L A + L ++P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ ++ G K G++E E F S++ P+ + +G + A+
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNL--SLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 348 LLVTLRNAGHV-STEIYNSLLRTYAKAG 374
LL ++ G + ++ YN+L+R + G
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 100/287 (34%), Gaps = 37/287 (12%)
Query: 97 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
D V +K P +V +N L+A A N E +++ I D +YS
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN----------------MGYK 200
+ + + A L +M K + V SSLL+ Y + MGYK
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 201 DEVLRIWKKMMSLFAKMNDAE-------------------YTCVISSLVKLGEFEKAENI 241
+ + LF +E Y V++ L K G+ + A ++
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ E D + N ++ ++ A + + + KGI+P T+ L
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
G+ I RK P+ +A + ++G + AE L
Sbjct: 306 YGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 94/247 (38%), Gaps = 5/247 (2%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A F ++ K++ P + ++ L S KM E + ++M+ + YS
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ + L + KMM L + + + +++ A + D+ +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D L+ N+ A + +++V +G +P T+ + G K+G ++ L
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 311 CFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
KK G + V + I K + +D A +L + N G Y+SL+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKH---MDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 369 TYAKAGK 375
G+
Sbjct: 302 CLCNYGR 308
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 160/365 (43%), Gaps = 17/365 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + EN+P RG LL + V +AE + KM + GF N +L LY
Sbjct: 230 EKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYK 289
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +L V M++ K+N P + TY L + + D E EK ++ I+PD
Sbjct: 290 RVDKKKLGDVLTMME--KENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDL 347
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +T+ YI EK+ L++M +NR A +L LY +G D+V RIW K
Sbjct: 348 LFQATIARHYIFGGYREKSEAILEQMVGDDINENRSACKFVLPLYAFLGKNDDVERIW-K 406
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAAYI 265
+ A+++ E I + KLG+ EKAE I+D W+++S + N +L Y
Sbjct: 407 VCEANARLD--ECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSS----KYYNAMLKVYA 460
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
N+ + + R+ G + T + L Y G++EK K + K P
Sbjct: 461 NKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEKADSILHK-LSYKNKIKPM 519
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERM 384
+ + ++GD+ AE L +R G+ Y LL Y A P ERM
Sbjct: 520 YTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERM 579
Query: 385 QKDNV 389
+ D++
Sbjct: 580 KADDI 584
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 163/363 (44%), Gaps = 13/363 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + E +P+ RG LL +YV AEA+ KM + GF N ML LY
Sbjct: 214 EAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYK 273
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ V +++ K+N P++ TY + + ND E+ +K ++PD
Sbjct: 274 RVDKKKIADVLLLME--KENLKPNLNTYKILIDTKGLSNDITGMEQIVETMKSEGVEPDL 331
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ + + Y L EKA LKEME + +NR Y LLS+Y + DEV RIWK
Sbjct: 332 RARALIARNYASAGLKEKAEKVLKEMEGESLEENRHVYKDLLSVYGFLQRADEVTRIWKI 391
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
K E I + K+ + ++AE ++++ +S V ++LL Y++
Sbjct: 392 CEE---KPRYNESLAAILAFGKIDKVKEAEAVFEKMLKMSHRVSSNVYSVLLRVYVDHKM 448
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS--VRKWVPDHR 327
+ + +++ G T + + YL+ G++EK KAI S ++ +
Sbjct: 449 VSEGKDLVKQMLDSGCNIGALTLDAVIKLYLEAGEVEKAESSLSKAIQSKQIKPLMSSFM 508
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKMPLIIVERMQK 386
+ Y + +GD+ E + ++ G+ S Y +L++ Y A + +RM+
Sbjct: 509 YVMGEYVR---RGDVHNTEKIFQRMKQFGYQSRFRTYQALIQAYVNAKAPAYGMKDRMKA 565
Query: 387 DNV 389
DN+
Sbjct: 566 DNI 568
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 177/362 (48%), Gaps = 10/362 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD T S+LL+ Y +K+ ++A AL+++M E G+ + +N +++ L++ N + V
Sbjct: 148 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 207
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ Q +++ PD+VTY + + D + A +++K KI+ D + Y+T+ K
Sbjct: 208 VDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 267
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A +ME + R + Y+SL+S N G + R+ M+ N
Sbjct: 268 YKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVT 327
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++ +I + VK G+ +AE +YDE S D + L+ + ++L+ A+ + ++
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K P T+ L G+ K ++E+ +E F++ S R V + L + GD
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQK 397
D A+ + + + G V +I Y+ LL K GK+ L++ E +QK ++ D T
Sbjct: 446 CDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 398 VL 399
++
Sbjct: 505 IM 506
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 147/335 (43%), Gaps = 17/335 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + K PD T ++L+ + ++A L+ M E + ++ +++ ++
Sbjct: 277 LFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFV 336
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G+L + ++ E +K++ PD+ TY+ + + + A+ F + P+ +
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL + K + E+ +EM +R N V Y++L+ G D +I+KKM
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+S + Y+ ++ L K G+ EKA +++ + D NI++ ++
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRL 328
E + L KG+KP + + G+ +KG E+ F+ K G+ +PD
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT----LPD--- 569
Query: 329 ITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVS 359
+ YN L GD + L+ +R+ G V
Sbjct: 570 -SGCYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 114/304 (37%), Gaps = 43/304 (14%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLE 139
L N +LNL +LD + E+ ++ P +V +N L+A A +
Sbjct: 51 LSRNALLNL-----KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGER 105
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN--- 196
++ +I D SY+ L + + + A L +M K + V SSLL+ Y +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR 165
Query: 197 -------------MGYKDEVLRIWKKMMSLFAKMNDAE-------------------YTC 224
MGYK + + + LF +E Y
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
V++ L K G+ + A ++ + E D + N ++ ++ A + +N++ TKG
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I+P T+ L G+ I RK P+ +A + ++G +
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIE--RKINPNVVTFSALIDAFVKEGKLVE 343
Query: 345 AEHL 348
AE L
Sbjct: 344 AEKL 347
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 163/373 (43%), Gaps = 11/373 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ + LQ E++ E +P RG LL + V + +AE + KM + GF
Sbjct: 197 IAKVRGLQKA--EHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPIT 254
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
N +L LY + +L K++ P + TY L + ND E+
Sbjct: 255 TFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVET 314
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K I+P+ S L Y+ L EKA LKEME ++NR LL Y +G
Sbjct: 315 MKAEGIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGK 374
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D+V RIWK S E+ I + KL + E+AE I+++ + +
Sbjct: 375 ADDVERIWKVCES---NPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSA 431
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--G 317
LL Y + L + ++ G + TW+ L Y++ G++EK + +KA+
Sbjct: 432 LLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQS 491
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
++ + I Y K +GDI +E + +R +G+VS + L++ Y A
Sbjct: 492 PIKPMFSTYMAIMDQYAK---RGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKAP 548
Query: 377 PLIIVERMQKDNV 389
I ERM+ DN+
Sbjct: 549 AYGIKERMKADNI 561
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 163/373 (43%), Gaps = 11/373 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ + LQ E++ E +P RG LL + V + +AE + KM + GF
Sbjct: 234 IAKVRGLQKA--EHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPIT 291
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
N +L LY + +L K++ P + TY L + ND E+
Sbjct: 292 TFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVET 351
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K I+P+ S L Y+ L EKA LKEME ++NR LL Y +G
Sbjct: 352 MKAEGIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGK 411
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D+V RIWK S E+ I + KL + E+AE I+++ + +
Sbjct: 412 ADDVERIWKVCES---NPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSA 468
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--G 317
LL Y + L + ++ G + TW+ L Y++ G++EK + +KA+
Sbjct: 469 LLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQS 528
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
++ + I Y K +GDI +E + +R +G+VS + L++ Y A
Sbjct: 529 PIKPMFSTYMAIMDQYAK---RGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKAP 585
Query: 377 PLIIVERMQKDNV 389
I ERM+ DN+
Sbjct: 586 AYGIKERMKADNI 598
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 168/351 (47%), Gaps = 8/351 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++ N + V + +
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ P++VTY + + + D + A +++ KI+ D + ++T+ K
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S + G + ++ M+ N + +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + VK G+F +AE +YD+ S D N L+ + ++L+ A+ + +V+K
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K ++E E F++ S R V D T L GD D A
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
+ + + + G V +I Y+ LL GK+ L + + MQK +++D
Sbjct: 455 QKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 125/285 (43%), Gaps = 3/285 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F+ + K P+ T S+L+ + ++A L+ M E + +N +++ +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G+ + ++ + +K++ PD+ TYN + + + A++ F + PD
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+TL + K + E +EM R + V Y++L+ + G D +++K+
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S + Y+ ++ L G+ EKA ++D + D + ++ +
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++ + L KG+KP T+ + G K +++ KK
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 7/245 (2%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + K PD T + L+ + ++K+ + L +MS G + + Y ++
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G D ++ +++ PD++TY++ L + E A + F ++K++I D
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+T+ K + + + + N V Y++++S + E + KKM
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINR 267
N Y +I + ++ G+ + + E S GD V N+L +++
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDK 627
Query: 268 NQLEM 272
+ L+M
Sbjct: 628 SFLDM 632
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 175/351 (49%), Gaps = 12/351 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y +K+ +EA AL+++M G+ + +N +++ L++ N + V + +
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 212
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PD+VTY + + + D + A ++++ K++P + Y+T+ K +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHM 272
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S N G + R+ M+ + ++ +
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTK 283
I + VK G+ +AE +YDE + + DP + L+ + ++L+ A+ + +V+K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P ++ L G+ K ++++ +E F++ S R V + T L + GD D
Sbjct: 391 HCFPDVVSYSTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIQGLFQAGDCD 448
Query: 344 GAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
A+ + + + G V I YN+LL K GK+ +++ E +Q+ ++
Sbjct: 449 MAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ ++ +NK +A L ++M G + Y+ +++ + G+ ++L + ++
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PDV T++ + A + AEK + E+ K IDP ++YS+L + + + ++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M + C + V+YS+L+ + DE + ++++M N YT +I
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L + G+ + A+ I+ E S + N LL +LE A + L ++P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ ++ G K G++E + F S++ PD + +G + A+
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNL--SLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 348 LLVTLRNAGHV-STEIYNSLLRTYAKAG 374
L ++ G + ++ YN+L+R + G
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 122/305 (40%), Gaps = 77/305 (25%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T SAL+ ++V+ K EAE L ++M + + Y+ ++N + + +LD+ QM
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 103 LQEL-KKNTSPDVVTYNLWLAA-CASQ--------------------------------- 127
+ + K+ PDVV+Y+ + C ++
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443
Query: 128 -NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-------- 178
D + A++ F E+ + P+ ++Y+TL K EKA + +++
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 179 -------TCRKNR--------------------VAYSSLLSLYTNMGYKDEVLRIWKKMM 211
C+ + VAY++++S + G K+E ++K+M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINR 267
N Y +I + ++ G+ E + + E S GD V N+L +++
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623
Query: 268 NQLEM 272
+ L+M
Sbjct: 624 SFLDM 628
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 88/225 (39%), Gaps = 1/225 (0%)
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+S +LD + E+ K+ P ++ ++ L+A A N + +++ + +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNH 116
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L + + + A L +M K N V SSLL+ Y + E + + +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + N + +I L + +A + D + D +++ R
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++A N++ ++P + + G K M+ L FK+
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 168/351 (47%), Gaps = 8/351 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++ N + V + +
Sbjct: 119 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 178
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ P++VTY + + + D + A +++ KI+ D + ++T+ K
Sbjct: 179 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 238
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S + G + ++ M+ N + +
Sbjct: 239 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + VK G+F +AE +YD+ S D N L+ + ++L+ A+ + +V+K
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K ++E E F++ S R V D T L GD D A
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNA 416
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
+ + + + G V +I Y+ LL GK+ L + + MQK +++D
Sbjct: 417 QKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 466
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 125/285 (43%), Gaps = 3/285 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F+ + K P+ T S+L+ + ++A L+ M E + +N +++ +
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G+ + ++ + +K++ PD+ TYN + + + A++ F + PD
Sbjct: 303 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 362
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+TL + K + E +EM R + V Y++L+ + G D +++K+
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S + Y+ ++ L G+ EKA ++D + D + ++ +
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++ + L KG+KP T+ + G K +++ KK
Sbjct: 483 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 7/245 (2%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + K PD T + L+ + ++K+ + L +MS G + + Y ++
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G D ++ +++ PD++TY++ L + E A + F ++K++I D
Sbjct: 410 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+T+ K + + + + N V Y++++S + E + KKM
Sbjct: 470 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINR 267
N Y +I + ++ G+ + + E S GD V N+L +++
Sbjct: 530 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDK 589
Query: 268 NQLEM 272
+ L+M
Sbjct: 590 SFLDM 594
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 21/367 (5%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + EN+P RG LL + V + E + KM + GF N +L LY
Sbjct: 230 EKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYK 289
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +L V M++ K+N P + TY L + + D E EK ++ I+PD
Sbjct: 290 RVDKKKLGDVLTMME--KENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDL 347
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +T+ YI EKA L+++E +NR A +L LY +G K +V RIW K
Sbjct: 348 LIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIW-K 406
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAAYI 265
+ + A+++ E I + KLG+ EKAE I++ W+++S N +L Y
Sbjct: 407 VCEVNARLD--ECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSF----EYYNAMLKVYA 460
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWV 323
N+ + + R+ G + +T + L Y G++EK K ++
Sbjct: 461 NKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLY 520
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVE 382
+ ++ +Y+K +GD+ AE L +R G+ Y LL Y A P E
Sbjct: 521 TTYLMLLDSYSK---KGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKE 577
Query: 383 RMQKDNV 389
RM+ D++
Sbjct: 578 RMKADDI 584
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 177/360 (49%), Gaps = 12/360 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y +K+ +EA AL+++M G+ + +N +++ L++ N + + + +
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PD+VTY + + + D + A ++++ K++P + Y+T+ K +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S N G + R+ M+ + ++ +
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTK 283
I + VK G+ +AE +YDE + + DP + L+ + ++L+ A+ + +V+K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P T+ L G+ K ++E+ +E F++ S R V + L + GD D
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 344 GAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
A+ + + + G V I YN+LL K GK+ +++ E +Q+ ++ T ++
Sbjct: 449 MAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 163/382 (42%), Gaps = 13/382 (3%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMR------GPDTCSALLHS 54
++R G Q +Y V L R + NL +KM G + ++
Sbjct: 209 IDRMVAKGCQPDLVTYGVVV---NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 55 YVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPD 113
+ K +A L ++M G + Y+ +++ + G+ ++L ++ ++ +PD
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
V T++ + A + AEK + E+ K IDP ++YS+L + + + ++A +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
M + C + V Y++L+ + +E + ++++M N Y +I L + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+ + A+ I+ E S + N LL +LE A + L ++P T+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
++ G K G++E + F S++ PD + +G + A+ L ++
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNL--SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 354 NAGHV-STEIYNSLLRTYAKAG 374
G + ++ YN+L+R + G
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDG 585
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 120/305 (39%), Gaps = 77/305 (25%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T SAL+ ++V+ K EAE L ++M + + Y+ ++N + + +LD+ QM
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 103 LQEL-KKNTSPDVVTYN-----------------------------------LWLAACAS 126
+ + K+ PDVVTYN + +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-------- 178
D + A++ F E+ + P+ ++Y+TL K EKA + +++
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 179 -------TCRKNR--------------------VAYSSLLSLYTNMGYKDEVLRIWKKMM 211
C+ + VAY++++S + G K+E ++K+M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINR 267
N Y +I + ++ G+ E + + E S GD V N+L +++
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623
Query: 268 NQLEM 272
+ L+M
Sbjct: 624 SFLDM 628
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 1/225 (0%)
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+S +LD + E+ K+ P ++ ++ L+A A N + +++ I +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L + + + A L +M K N V SSLL+ Y + E + + +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + N + +I L + +A + D + D +++ R
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++A + N++ ++P + + G K M+ L FK+
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 21/367 (5%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + EN+P RG LL + V + E + KM + GF N +L LY
Sbjct: 210 EKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYK 269
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +L V M++ K+N P + TY L + + D E EK ++ I+PD
Sbjct: 270 RVDKKKLGDVLTMME--KENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDL 327
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +T+ YI EKA L+++E +NR A +L LY +G K +V RIW K
Sbjct: 328 LIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIW-K 386
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAAYI 265
+ + A+++ E I + KLG+ EKAE I++ W+++S N +L Y
Sbjct: 387 VCEVNARLD--ECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSF----EYYNAMLKVYA 440
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWV 323
N+ + + R+ G + +T + L Y G++EK K ++
Sbjct: 441 NKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLY 500
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVE 382
+ ++ +Y+K +GD+ AE L +R G+ Y LL Y A P E
Sbjct: 501 TTYLMLLDSYSK---KGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKE 557
Query: 383 RMQKDNV 389
RM+ D++
Sbjct: 558 RMKADDI 564
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 21/367 (5%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + EN+P RG LL + V + E + KM + GF N +L LY
Sbjct: 230 EKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYK 289
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +L V M++ K+N P + TY L + + D E EK ++ I+PD
Sbjct: 290 RVDKKKLGDVLTMME--KENVKPSLFTYKLLVDTKGATRDIEDMEKVIQAMQADGIEPDL 347
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +T+ YI EKA L+++E +NR A +L LY +G K +V RIW K
Sbjct: 348 LIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIW-K 406
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAAYI 265
+ + A+++ E I + KLG+ EKAE I++ W+++S N +L Y
Sbjct: 407 VCEVNARLD--ECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSF----EYYNAMLKVYA 460
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWV 323
N+ + + R+ G + +T + L Y G++EK K ++
Sbjct: 461 NKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLY 520
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVE 382
+ ++ +Y+K +GD+ AE L +R G+ Y LL Y A P E
Sbjct: 521 TTYLMLLDSYSK---KGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKE 577
Query: 383 RMQKDNV 389
RM+ D++
Sbjct: 578 RMKADDI 584
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 6/347 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
++F ++ +K PD T + L+++Y + EA LM+ MS G C YN ++N
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
G+ + +L E LK SPD TYN+ L C ++ AE+ F E+ + PD
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+S+S L L K ++A ++M+ + V Y+ L+ + G E L++
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 557
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M+ ++ Y +++ L K +A+ ++ E D L+ Y
Sbjct: 558 EMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDG 617
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ A + + ++ + +KP T+ L G+ K +MEKV E + I R+ P+H
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS--RRIYPNHIS 675
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY-NSLLRTYAKAG 374
N G + A L + G +T I N++++ Y +AG
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 722
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 128/312 (41%), Gaps = 5/312 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+F ++ + PD + L+ + +N +EA + ++M E G + YN +LN
Sbjct: 520 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLC 579
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
L + ++ E+ ++ PD T+ + + A F + + + PD +
Sbjct: 580 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL + K EK +M R N ++Y L++ Y NMG E R+W +M
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + ++ + G KA+ D N L+ +I +
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 759
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A + N++ G+ P T+ ++ G+ ++G+M++ K I R PD T
Sbjct: 760 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE--RGVNPDRSTYT 817
Query: 331 AAYNKLEEQGDI 342
+ N Q ++
Sbjct: 818 SLINGHVTQNNL 829
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 132/308 (42%), Gaps = 22/308 (7%)
Query: 26 LQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM-------------- 71
L R ++ N P+ + SA++H V++++ +A+A++ +M
Sbjct: 217 LGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVES 276
Query: 72 -----SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 125
CG PL ++ ++ Y+ +L + + + LK K + N L
Sbjct: 277 LVLTYGNCG--SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV 334
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A + + E+ ++ + + + + + + K + E + L +ME++ + V
Sbjct: 335 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVV 394
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y++L++ Y G +E + M K Y +I+ L K G++ +A+ + DE
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
I + D NILL + + AE ++ + ++G+ P ++ L K G +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 514
Query: 306 EKVLECFK 313
++ L+ F+
Sbjct: 515 DQALKYFR 522
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ ++ Y + + +A+ + M G + + YN ++N +I +D+ ++ ++
Sbjct: 710 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 769
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + PDV+TYN+ L + Q + AE L++ + ++PD +Y++L + ++
Sbjct: 770 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 829
Query: 166 EKAATTLKEMEKR 178
++A EM +R
Sbjct: 830 KEAFRVHDEMLQR 842
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L++ Y +EA L ++M E GF + N ++ Y G K + L L K
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD +TYN + + + + A +++ + + PD I+Y+ + + + + ++A
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 798
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ +M +R +R Y+SL++ + E R+ +M+
Sbjct: 799 LIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 840
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + PD T + L+ + + + + L M + Y ++N Y
Sbjct: 625 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 684
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ G + + ++ E+ +K ++T N + + A++ + I PD I
Sbjct: 685 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL + +IK E ++A + +ME + + Y+ +L+ ++ G E I KM
Sbjct: 745 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ + + YT +I+ V ++A ++DE
Sbjct: 805 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 838
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+ F N+ K PD T + L++ +++ + A AL+ KM G L + YN +LN
Sbjct: 728 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 787
Query: 90 YISNGQLDKVPQ-MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G++ + ML+ +++ +PD TY + +QN+ + A + E+ + PD
Sbjct: 788 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 109/279 (39%), Gaps = 41/279 (14%)
Query: 151 SYSTLTSLYIKME-LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
S+S + + ++ LP+ A L+ + K + + S +L+ Y N G V + +
Sbjct: 238 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLT-YGNCGSNPLVFDLLVR 296
Query: 210 MMSLFAKMND---------AEYTCV--------ISSLVKLGEFEKAENIYDEWESISGTG 252
K+ + ++ CV + LVK+G + A IY E
Sbjct: 297 TYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV 356
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ NI++ A ++E +SF + + KG+ P T+ L Y ++G +E+ E
Sbjct: 357 NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELM 416
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYA 371
G K P A N L + G A+ +L + G T YN LL
Sbjct: 417 DSMSGKGLK--PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL---- 470
Query: 372 KAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPVSEV 410
VE + DN+ MDAE +I EMP V
Sbjct: 471 ---------VECCRNDNM-MDAE-----RIFDEMPSQGV 494
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 174/351 (49%), Gaps = 12/351 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y +K+ +EA AL+++M G+ + +N +++ L++ N + + + +
Sbjct: 767 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 826
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PD+VTY + + + D + A ++++ K++P + Y+T+ K +
Sbjct: 827 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 886
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S N G + R+ M+ + ++ +
Sbjct: 887 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 946
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTK 283
I + VK G+ +AE +YDE + + DP + L+ + ++L+ A+ + +V+K
Sbjct: 947 IDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 1004
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P T+ L G+ K ++E+ +E F++ S R V + L + GD D
Sbjct: 1005 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCD 1062
Query: 344 GAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
A+ + + + G V I YN+LL K GK+ +++ E +Q+ ++
Sbjct: 1063 MAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T +L++ + + + ++A +L++KM E G+ + YN +++ +++
Sbjct: 256 PDRV----TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 311
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+E+ +K P+VVTY + + + A + ++ K KI P+ I+YS L
Sbjct: 312 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 371
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++K +A +EM + + + V YSSL++ DE +++ M+S
Sbjct: 372 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 431
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I+ K E ++ E + N L+ + ++ A+ F+
Sbjct: 432 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 491
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+++ GI P T+ +L G G++EK L F+
Sbjct: 492 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 156/356 (43%), Gaps = 13/356 (3%)
Query: 4 RRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKS 61
R G+ V R RV+ A +L + E ++ PD + A++ S + K+
Sbjct: 258 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK--------PDIVAYNAIIDSLCKTKRV 309
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLW 120
+A +++ G + Y ++N ++ + ++L + +KK +P+V+TY+
Sbjct: 310 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 369
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L A A++ F E+ + IDPD ++YS+L + + ++A M + C
Sbjct: 370 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 429
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ V+Y++L++ + ++ ++++++M N Y +I + G+ +KA+
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 489
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ + + + D NILL + +LE A + + + + T+ + G
Sbjct: 490 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 549
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
K G++E+ F S++ PD T + L +G + E L ++ G
Sbjct: 550 KTGKVEEAWSLFCSL--SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 16/354 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
LL + V+ KK +L +KM G +N ++N + Q+ +L + LK
Sbjct: 194 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 253
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD VT + +N A ++ + PD ++Y+ + K + A
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 313
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
KE+E++ R N V Y++L++ N + R+ M+ N Y+ ++ +
Sbjct: 314 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 373
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
VK G+ +A+ +++E +S D + L+ ++++ A ++ +V+KG
Sbjct: 374 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 433
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL----EEQGDIDGA 345
++ L G+ K ++E ++ F++ S R V + T YN L + GD+D A
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVSN----TVTYNTLIQGFFQAGDVDKA 487
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
+ + G +S +I YN LL G++ L+I E MQK + +D T
Sbjct: 488 QEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 540
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 163/382 (42%), Gaps = 13/382 (3%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMR------GPDTCSALLHS 54
++R G Q +Y V L R + NL +KM G + ++
Sbjct: 823 IDRMVAKGCQPDLVTYGVVV---NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879
Query: 55 YVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPD 113
+ K +A L ++M G + Y+ +++ + G+ ++L + +++ +PD
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
V T++ + A + AEK + E+ K IDP ++YS+L + + + ++A +
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
M + C + V Y++L+ + +E + ++++M N Y +I L + G
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+ + A+ I+ E S + N LL +LE A + L ++P T+
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
++ G K G++E + F S++ PD + +G + A+ L ++
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNL--SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 1177
Query: 354 NAGHV-STEIYNSLLRTYAKAG 374
G + ++ YN+L+R + G
Sbjct: 1178 EDGTLPNSGCYNTLIRARLRDG 1199
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 120/305 (39%), Gaps = 77/305 (25%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T SAL+ ++V+ K EAE L ++M + + Y+ ++N + + +LD+ QM
Sbjct: 938 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997
Query: 103 LQEL-KKNTSPDVVTYN-----------------------------------LWLAACAS 126
+ + K+ PDVVTYN + +
Sbjct: 998 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-------- 178
D + A++ F E+ + P+ ++Y+TL K EKA + +++
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 1117
Query: 179 -------TCRKNR--------------------VAYSSLLSLYTNMGYKDEVLRIWKKMM 211
C+ + VAY++++S + G K+E ++K+M
Sbjct: 1118 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 1177
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINR 267
N Y +I + ++ G+ E + + E S GD V N+L +++
Sbjct: 1178 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 1237
Query: 268 NQLEM 272
+ L+M
Sbjct: 1238 SFLDM 1242
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 1/225 (0%)
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+S +LD + E+ K+ P ++ ++ L+A A N + +++ I +
Sbjct: 671 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 730
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L + + + A L +M K N V SSLL+ Y + E + + +
Sbjct: 731 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 790
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + N + +I L + +A + D + D +++ R
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++A + N++ ++P + + G K M+ L FK+
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 160/363 (44%), Gaps = 13/363 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + EN+P RG LL + V + E + KM + GF N +L LY
Sbjct: 45 EKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYK 104
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +L V M++ K+N P + TY L + + D E EK ++ I+PD
Sbjct: 105 RVDKKKLGDVLTMME--KENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDL 162
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +T+ YI EKA L+++E +NR A +L LY +G K +V RIW K
Sbjct: 163 LIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIW-K 221
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + A+++ E I + KLG+ EKAE I++ T N +L Y N+
Sbjct: 222 VCEVNARLD--ECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKL 279
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHR 327
+ + R+ G + +T + L Y G++EK K ++ +
Sbjct: 280 FDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYL 339
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQK 386
++ +Y+K +GD+ AE L +R G+ Y LL Y A P ERM+
Sbjct: 340 MLLDSYSK---KGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKA 396
Query: 387 DNV 389
D++
Sbjct: 397 DDI 399
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 155/330 (46%), Gaps = 7/330 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ +Y NKK +A + KM E G + YN +LN+Y G K+ ++Q++K
Sbjct: 183 TSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMK 242
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+PD+ TYN ++ C + + E A F E+K PD ++Y+ L +Y K P+
Sbjct: 243 CHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPK 302
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LK+ME + R + V Y+SL+S Y G ++ L + +KM+ K + YT ++
Sbjct: 303 EAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLL 362
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S V G+ E A +++E + + N L+ Y +R + E + +
Sbjct: 363 SGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCS 422
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P TW L + + G +V F++ S ++ P+ + G D A
Sbjct: 423 PDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRS--RFAPERDTFNTLISAYGRCGSFDQAM 480
Query: 347 HLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
+ AG VS ++ YN++L T A+ G
Sbjct: 481 AAYKRMLEAG-VSPDLSTYNAVLATLARGG 509
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 5/280 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + PD T +ALL Y ++++ EA ++++M F + YN +++ Y
Sbjct: 271 DLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAY 330
Query: 91 ISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G L+ + +++ K PDV TY L+ + +E A + F E++K P+
Sbjct: 331 VRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNI 390
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+++ L +Y E+ KE++ C + V +++LL+++ G EV ++++
Sbjct: 391 CTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEE 450
Query: 210 M-MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M S FA D + +IS+ + G F++A Y + D N +LA
Sbjct: 451 MKRSRFAPERDT-FNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGG 509
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
E +E + G KP T+ L Y ++E++
Sbjct: 510 LWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERM 549
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 155/330 (46%), Gaps = 8/330 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ +YV+ +A L KM + G Y +L+ +++ G+ + ++ +E+
Sbjct: 322 TYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEM 381
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P++ T+N + + E K F E+K K PD ++++TL +++ + +
Sbjct: 382 RKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMD 441
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ + +EM++ R +++L+S Y G D+ + +K+M+ + + Y V
Sbjct: 442 SEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAV 501
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++L + G +E++E + E + + + LL AY N ++E + + + I
Sbjct: 502 LATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTI 561
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDID 343
K T LL L +++ ++E ++A RK PD A + + +
Sbjct: 562 K---THAVLLKTLVLVNSKVDLLVET-ERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVP 617
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
A +L + +G +S YNSL+ Y++
Sbjct: 618 KANEILNFMYESGLTLSLTSYNSLMYMYSR 647
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L Y + K +A ++ M E G YN ++ +Y K Q+
Sbjct: 598 PDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQI 657
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E L K PDV++YN+ + A + + A++ E+K PD ++Y+T + Y
Sbjct: 658 FREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAA 717
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +A ++ M K+ C+ N Y+S++ Y + +DE + + L ++++ E
Sbjct: 718 DSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDLDPQISEDE 777
Query: 222 YTCVISSLVK 231
+ ++ + K
Sbjct: 778 KSRLLERIAK 787
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 94 GQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G++ + +L L+ + DV Y + A A+ A K F ++K+ +P I+Y
Sbjct: 158 GRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITY 217
Query: 153 STLTSLYIKMELP-EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ + ++Y KM +P K +++M+ + Y++L+S +E L +++++
Sbjct: 218 NAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIK 277
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + Y ++ K ++A + + ES S N L++AY+ LE
Sbjct: 278 VAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLE 337
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
A ++V KGIKP T+ L G++ G+ E +E F++
Sbjct: 338 DALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEE 380
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 124/264 (46%), Gaps = 11/264 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + ++E ++ +M + G + Y+ +L+ Y + +++++ +
Sbjct: 493 PDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNAL 552
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDK-----ETAEKAFLELKKTKIDPDWISYSTLTS 157
+E+ T + T+ + L N K ET E+AFLE +K I PD + + + S
Sbjct: 553 AEEIYSGT---IKTHAVLLKTLVLVNSKVDLLVET-ERAFLEFRKRGISPDVTTSNAMLS 608
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+Y + ++ KA L M + + +Y+SL+ +Y+ + +I+++++ +
Sbjct: 609 IYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEP 668
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y VI + + ++A+ I +E + + D N +AAY + A
Sbjct: 669 DVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVI 728
Query: 278 NRLVTKGIKPCYTTWELLTWGYLK 301
++ +G KP + T+ + Y K
Sbjct: 729 RYMIKQGCKPNHNTYNSIVDWYCK 752
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 84 NHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ML++Y + K ++L + + + + +YN + + + +E+ F E+
Sbjct: 604 NAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILD 663
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I+PD ISY+ + Y + ++ ++A ++EM+ + V Y++ ++ Y E
Sbjct: 664 KGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVE 723
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
+ + + M+ K N Y ++ KL
Sbjct: 724 AIDVIRYMIKQGCKPNHNTYNSIVDWYCKL 753
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 6/347 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
++F ++ +K PD T + L+++Y + EA LM+ MS G C YN ++N
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
G+ + +L E LK SPD TYN+ L C ++ AE+ F E+ + PD
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 393
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+S+S L L K ++A ++M+ + V Y+ L+ + G E L++
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 453
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M+ ++ Y +++ L K +A+ ++ E D L+ Y
Sbjct: 454 EMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 513
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ A + + ++ + +KP T+ L G+ K +MEKV E + I R+ P+H
Sbjct: 514 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS--RRIYPNHIS 571
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY-NSLLRTYAKAG 374
N G + A L + G +T I N++++ Y +AG
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 618
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 130/312 (41%), Gaps = 5/312 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+F ++ + PD + L+ + +N +EA + ++M E G + + YN +LN
Sbjct: 416 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 475
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
L + ++ E+ ++ PD T+ + + + A F + + + PD +
Sbjct: 476 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL + K EK +M R N ++Y L++ Y NMG E R+W +M
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + ++ + G KA+ D N L+ +I +
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 655
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A + N++ G+ P T+ ++ G+ ++G+M++ K I R PD T
Sbjct: 656 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE--RGVNPDRSTYT 713
Query: 331 AAYNKLEEQGDI 342
+ N Q ++
Sbjct: 714 SLINGHVTQNNL 725
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 152/368 (41%), Gaps = 25/368 (6%)
Query: 26 LQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM-------------- 71
L R ++ N P+ + SA++H V++++ +A+A++ +M
Sbjct: 113 LGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVES 172
Query: 72 -----SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 125
CG PL ++ ++ Y+ +L + + + LK K + N L
Sbjct: 173 LVLTYGNCG--SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV 230
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A + + E+ ++ + + + + + + K + E + L +ME++ + V
Sbjct: 231 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVV 290
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y++L++ Y G +E + M K Y +I+ L K G++ +A+ + DE
Sbjct: 291 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
I + D NILL + + AE ++ + ++G+ P ++ L K G +
Sbjct: 351 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 410
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
++ L+ F+ + PD+ + T G + A + + G V + YN
Sbjct: 411 DQALKYFRDMKNA--GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 468
Query: 365 SLLRTYAK 372
++L K
Sbjct: 469 TILNGLCK 476
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ ++ Y + + +A+ + M G + + YN ++N +I +D+ ++ ++
Sbjct: 606 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 665
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + PDV+TYN+ L + Q + AE L++ + ++PD +Y++L + ++
Sbjct: 666 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 725
Query: 166 EKAATTLKEMEKR 178
++A EM +R
Sbjct: 726 KEAFRVHDEMLQR 738
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L++ Y +EA L ++M E GF + N ++ Y G K + L L K
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD +TYN + + + + A +++ + + PD I+Y+ + + + + ++A
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 694
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ +M +R +R Y+SL++ + E R+ +M+
Sbjct: 695 LIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 736
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + PD T + L+ + + + + L M + Y ++N Y
Sbjct: 521 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 580
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ G + + ++ E+ +K ++T N + + A++ + I PD I
Sbjct: 581 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL + +IK E ++A + +ME + + Y+ +L+ ++ G E I KM
Sbjct: 641 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 700
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ + + YT +I+ V ++A ++DE
Sbjct: 701 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 734
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+ F N+ K PD T + L++ +++ + A AL+ KM G L + YN +LN
Sbjct: 624 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 683
Query: 90 YISNGQLDKVPQ-MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G++ + ML+ +++ +PD TY + +QN+ + A + E+ + PD
Sbjct: 684 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 109/279 (39%), Gaps = 41/279 (14%)
Query: 151 SYSTLTSLYIKME-LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
S+S + + ++ LP+ A L+ + K + + S +L+ Y N G V + +
Sbjct: 134 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLT-YGNCGSNPLVFDLLVR 192
Query: 210 MMSLFAKMND---------AEYTCV--------ISSLVKLGEFEKAENIYDEWESISGTG 252
K+ + ++ CV + LVK+G + A IY E
Sbjct: 193 TYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV 252
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ NI++ A ++E +SF + + KG+ P T+ L Y ++G +E+ E
Sbjct: 253 NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELM 312
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYA 371
G K P A N L + G A+ +L + G T YN LL
Sbjct: 313 DSMSGKGLK--PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL---- 366
Query: 372 KAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPVSEV 410
VE + DN+ MDAE +I EMP V
Sbjct: 367 ---------VECCRNDNM-MDAE-----RIFDEMPSQGV 390
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 168/351 (47%), Gaps = 8/351 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++ N + V + +
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ P++VTY + + + D + A +++ KI+ D + ++T+ K
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S + G + ++ M+ N + +
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + VK G+F +AE ++D+ S D N L+ + ++L+ A+ + +V+K
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K ++E E F++ S R V D T L GD D A
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
+ + + + G V +I Y+ LL GK+ L + + MQK +++D
Sbjct: 380 QKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 124/285 (43%), Gaps = 3/285 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F+ + K P+ T S+L+ + ++A L+ M E + +N +++ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G+ + ++ + +K++ PD+ TYN + + + A++ F + PD
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL + K + E +EM R + V Y++L+ + G D +++K+
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S + Y+ ++ L G+ EKA ++D + D + ++ +
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++ + L KG+KP T+ + G K +++ KK
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 131/329 (39%), Gaps = 6/329 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
LL + + KK +L EKM G YN ++N + Q+ +L ++ K
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P +VT + L A ++ + PD I+++TL +A
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ M +R C+ N V Y +++ G D + KM + + + + +I SL
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K + A N++ E E+ + + L++ + + A + ++ K I P
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L ++K+G K +E K +++ + PD + N +D A+ +
Sbjct: 256 VTFNALIDAFVKEG---KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 349 L-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ + YN+L++ + K+ ++
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 99/232 (42%), Gaps = 5/232 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ + ++K+ + L +MS G + + Y ++ +G D ++ ++
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 106 L-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ PD++TY++ L + E A + F ++K++I D Y+T+ K
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ + + + N V Y++++S + E + KKM + Y
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINRNQLEM 272
+I + ++ G+ + + E S GD V N+L ++++ L+M
Sbjct: 506 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDM 557
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD M T S LL N K +A + + M + Y M+ G++D
Sbjct: 393 PDIM----TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID---PDWISYST 154
+ L K P+VVTYN ++ S K ++A+ LKK K D PD +Y+T
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
L +++ +A ++EM R+CR V +S + L NM + + + + M+S
Sbjct: 506 LIRAHLRDGDKAASAELIREM--RSCR--FVGDASTIGLVANMLHDGRLDKSFLDMLS 559
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 168/351 (47%), Gaps = 8/351 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++ N + V + +
Sbjct: 81 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ P++VTY + + + D + A +++ KI+ D + ++T+ K
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S + G + ++ M+ N + +
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + VK G+F +AE ++D+ S D N L+ + ++L+ A+ + +V+K
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K ++E E F++ S R V D T L GD D A
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNA 378
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
+ + + + G V +I Y+ LL GK+ L + + MQK +++D
Sbjct: 379 QKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 428
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 124/285 (43%), Gaps = 3/285 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F+ + K P+ T S+L+ + ++A L+ M E + +N +++ +
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G+ + ++ + +K++ PD+ TYN + + + A++ F + PD
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL + K + E +EM R + V Y++L+ + G D +++K+
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S + Y+ ++ L G+ EKA ++D + D + ++ +
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++ + L KG+KP T+ + G K +++ KK
Sbjct: 445 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 99/232 (42%), Gaps = 5/232 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ + ++K+ + L +MS G + + Y ++ +G D ++ ++
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 106 L-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ PD++TY++ L + E A + F ++K++I D Y+T+ K
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ + + + N V Y++++S + E + KKM + Y
Sbjct: 445 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 504
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINRNQLEM 272
+I + ++ G+ + + E S GD V N+L ++++ L+M
Sbjct: 505 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDM 556
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD M T S LL N K +A + + M + Y M+ G++D
Sbjct: 392 PDIM----TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID---PDWISYST 154
+ L K P+VVTYN ++ S K ++A+ LKK K D PD +Y+T
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKEDGPLPDSGTYNT 504
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
L +++ +A ++EM R+CR V +S + L NM + + + + M+S
Sbjct: 505 LIRAHLRDGDKAASAELIREM--RSCR--FVGDASTIGLVANMLHDGRLDKSFLDMLS 558
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 162/372 (43%), Gaps = 7/372 (1%)
Query: 8 GAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEA 64
G QV + + A + + ++F ++ +K PD T + L+++Y + EA
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAA 123
LM+ MS G C YN ++N G+ + +L E LK SPD TYN+ L
Sbjct: 152 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 211
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
C ++ AE+ F E+ + PD +S+S L L K ++A ++M+ +
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y+ L+ + G E L++ +M+ ++ Y +++ L K +A+ ++
Sbjct: 272 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 331
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
E D L+ Y + A + + ++ + +KP T+ L G+ K
Sbjct: 332 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 391
Query: 304 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY 363
+MEKV E + I R+ P+H N G + A L + G +T I
Sbjct: 392 EMEKVNELWNDMIS--RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449
Query: 364 -NSLLRTYAKAG 374
N++++ Y +AG
Sbjct: 450 CNTIVKGYCRAG 461
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 130/312 (41%), Gaps = 5/312 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+F ++ + PD + L+ + +N +EA + ++M E G + + YN +LN
Sbjct: 259 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 318
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
L + ++ E+ ++ PD T+ + + + A F + + + PD +
Sbjct: 319 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL + K EK +M R N ++Y L++ Y NMG E R+W +M
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + ++ + G KA+ D N L+ +I +
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 498
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A + N++ G+ P T+ ++ G+ ++G+M++ K I R PD T
Sbjct: 499 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE--RGVNPDRSTYT 556
Query: 331 AAYNKLEEQGDI 342
+ N Q ++
Sbjct: 557 SLINGHVTQNNL 568
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 130/311 (41%), Gaps = 6/311 (1%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLA 122
E+L+ CG PL ++ ++ Y+ +L + + + LK K + N L
Sbjct: 13 VESLVLTYGNCG--SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLG 70
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ A + + E+ ++ + + + + + + K + E + L +ME++
Sbjct: 71 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 130
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ V Y++L++ Y G +E + M K Y +I+ L K G++ +A+ +
Sbjct: 131 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 190
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
DE I + D NILL + + AE ++ + ++G+ P ++ L K
Sbjct: 191 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 250
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
G +++ L+ F+ + PD+ + T G + A + + G V +
Sbjct: 251 GCLDQALKYFRDMKNA--GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 308
Query: 363 -YNSLLRTYAK 372
YN++L K
Sbjct: 309 TYNTILNGLCK 319
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ ++ Y + + +A+ + M G + + YN ++N +I +D+ ++ ++
Sbjct: 449 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 508
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + PDV+TYN+ L + Q + AE L++ + ++PD +Y++L + ++
Sbjct: 509 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 568
Query: 166 EKAATTLKEMEKR 178
++A EM +R
Sbjct: 569 KEAFRVHDEMLQR 581
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L++ Y +EA L ++M E GF + N ++ Y G K + L L K
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD +TYN + + + + A +++ + + PD I+Y+ + + + + ++A
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 537
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ +M +R +R Y+SL++ + E R+ +M+
Sbjct: 538 LIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + PD T + L+ + + + + L M + Y ++N Y
Sbjct: 364 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 423
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ G + + ++ E+ +K ++T N + + A++ + I PD I
Sbjct: 424 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL + +IK E ++A + +ME + + Y+ +L+ ++ G E I KM
Sbjct: 484 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 543
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ + + YT +I+ V ++A ++DE
Sbjct: 544 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 577
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+ F N+ K PD T + L++ +++ + A AL+ KM G L + YN +LN
Sbjct: 467 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 526
Query: 90 YISNGQLDKVPQ-MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G++ + ML+ +++ +PD TY + +QN+ + A + E+ + PD
Sbjct: 527 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 22/183 (12%)
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ LVK+G + A IY E + NI++ A ++E +SF + + KG
Sbjct: 68 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 127
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P T+ L Y ++G +E+ E G K P A N L + G
Sbjct: 128 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK--PCVFTYNAIINGLCKTGKYLR 185
Query: 345 AEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITS 403
A+ +L + G T YN LL VE + DN+ MDAE +I
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILL-------------VECCRNDNM-MDAE-----RIFD 226
Query: 404 EMP 406
EMP
Sbjct: 227 EMP 229
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 24/368 (6%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E F +N+P +RG LL + V +AE + KM + GF N +L LY
Sbjct: 232 EKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMKDLGFPVTVFAINQLLLLYK 291
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ V M++ K++ P + TY L + + D E EK ++ I PD
Sbjct: 292 RVDKKKISDVLTMME--KEDVKPSLFTYKLLVDTKGASRDIEGMEKVVQSMEAEGITPDL 349
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +T+ YI EKA L+ ME ++NR A ++ LY +G KD+V RIWK
Sbjct: 350 LLQATIAKHYIFGGHREKAEAILESMEGDM-KENRNACKMVMPLYAFLGKKDDVERIWKV 408
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAE----NIYDEWESISGTGDPRVPNILLAAYI 265
S E I + +LG+ EKAE N++ W+++S + N ++ Y
Sbjct: 409 CQS---NTRLDECLSAIEAFGRLGDVEKAEEVFGNMFKTWKTLSS----KYYNAMMRVYA 461
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
N+N ++ + R+ G + +T + L Y+ G++EK E + K P
Sbjct: 462 NQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEKA-ESLLHKLSVKNKMKPQ 520
Query: 326 HR---LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIV 381
+ ++ +Y+K+ GD+ +E + LR G+ Y LL Y A
Sbjct: 521 YSSYLMLLDSYSKI---GDVHNSEKVFSKLRQMGYNGRIRQYQLLLHAYLHAKAPVYGFR 577
Query: 382 ERMQKDNV 389
ERM+ DN+
Sbjct: 578 ERMKADNI 585
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 164/363 (45%), Gaps = 13/363 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + +P +G LL + V ++E + KM + GF + ML L+
Sbjct: 216 EACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHK 275
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
I ++ V +++ K+N P ++TY + + + ND E+ +K ++ D+
Sbjct: 276 RIDRKKIADVLLLME--KENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDF 333
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ + Y L +KA LKEME + NR A+ LLS+Y ++G +DEV RIWK
Sbjct: 334 QTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI 393
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S K E I + KL + ++AE I+++ + ++LL Y++
Sbjct: 394 CES---KPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKM 450
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHR 327
L + R+ G + TTW+ L Y++ G++EK KA + +
Sbjct: 451 LSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTKLMMNSFM 510
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKMPLIIVERMQK 386
I Y+K +GD+ E + + +R AG+ S + +L++ Y A + +R++
Sbjct: 511 YIMDEYSK---RGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKA 567
Query: 387 DNV 389
DN+
Sbjct: 568 DNI 570
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 19/337 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ + +N+K EA E+M E G + YN +++LY G+ + + ++ +E+K
Sbjct: 121 TSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMK 180
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ PD TYN + ACAS + E A + F ++K + PD ++Y+ L +Y K
Sbjct: 181 AQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYN 240
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+AA LKEME C N V Y+ LLS + G + + M+S + + YT ++
Sbjct: 241 EAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLL 300
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI-NRNQLEMAESFYNRLVTKGI 285
S+ + G+ E+A IY++ + + T + N L+ + N+N EM F + + G+
Sbjct: 301 SAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFED-MQACGV 359
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECF---KKAIGSVRKWVPD---HRLITAAYNKLEEQ 339
+P TW L + K G +VL+ F KKA + PD ++ AY +
Sbjct: 360 EPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKA-----GFEPDKATFNILIEAYGRC--- 411
Query: 340 GDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
G D A + + AG +N+LL A+ G+
Sbjct: 412 GSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGR 448
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 158/342 (46%), Gaps = 12/342 (3%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T +ALL Y + EA ++++M G L + YN +L+ + G +
Sbjct: 221 PDRV----TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNA 276
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+M + K PDV TY L+A + E A + + +++ + P+ +++ L
Sbjct: 277 AAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIG 336
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++ K + + ++M+ + V ++SLL + G EVL++++ M +
Sbjct: 337 MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEP 396
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ A + +I + + G ++A +IYD T D N LLAA + E AE
Sbjct: 397 DKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELIL 456
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLITAAYNKL 336
+ L KP + + Y G++EK+ K+ + ++ +VP +++ + +
Sbjct: 457 DELNRSSYKPNDIAYASMLHAYANGGELEKL----KEMVDTLHTIYVPFTKILLKTFVLV 512
Query: 337 EEQGD-IDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKM 376
+ +D AE + +R+ G++S T +N+++ Y K G M
Sbjct: 513 YSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMM 554
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 153/360 (42%), Gaps = 12/360 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ + +NK +E + E M CG + +N +L + NG +V ++ + +
Sbjct: 330 TFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGM 389
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK PD T+N+ + A + A + + + PD +++TL + +
Sbjct: 390 KKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRW 449
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A L E+ + + + N +AY+S+L Y N G +++ + + +++
Sbjct: 450 EHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTF 509
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ K ++AE+ + D N +++ Y + ++ A + L + G+
Sbjct: 510 VLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGL 569
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDI 342
+P T+ L Y ++G K ++ + + + PD + + +Y+K G +
Sbjct: 570 EPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQ--TPDLVSYNTVIFSYSK---HGQL 624
Query: 343 DGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKVL 399
A + + + G + YN+ + Y G P L +V+ M K + D T + L
Sbjct: 625 SSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTL 684
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL + + + AE ++++++ + + Y ML+ Y + G+L+K+ +M
Sbjct: 431 PDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEM 490
Query: 103 LQELKKNTSPD----VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ L P + T+ L + C+ ++ AE AFL ++ D +++ + S+
Sbjct: 491 VDTLHTIYVPFTKILLKTFVLVYSKCSLVDE---AEDAFLAMRHHGYLSDTSTFNAMISM 547
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y K + +KA T + + V Y+ L+ +Y G + ++ M+ +
Sbjct: 548 YGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPD 607
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y VI S K G+ A I+ E S D N + Y+N A S
Sbjct: 608 LVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVK 667
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
+ G KP T+ L Y K G+ E+V
Sbjct: 668 HMHKTGCKPDEVTYRTLVDAYCKIGKFEEV 697
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN ++ +Y G K L+E + +PD+V+YN + + + +A + F E
Sbjct: 574 VTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHE 633
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ I PD +Y+T Y+ + +A + +K M K C+ + V Y +L+ Y +G
Sbjct: 634 MVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGK 693
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYT 223
+EV RI K F K +D ++
Sbjct: 694 FEEVERILK-----FIKSSDPNFS 712
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 134/356 (37%), Gaps = 61/356 (17%)
Query: 94 GQLDKVPQMLQELKK--NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
GQ +K ++ +++ N PD VT + L ++ T + F L++ D +
Sbjct: 60 GQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYA 119
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y++L S + ++A ++M++ + + V Y+ ++ LY G R W+ ++
Sbjct: 120 YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKG------RSWENIL 173
Query: 212 SLFAKM------------NDAEYTCVISSLV----------------------------- 230
LF +M N A C SL
Sbjct: 174 ELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVY 233
Query: 231 -KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + +A N+ E ES + N LL+A+ A + +V+KGI+P
Sbjct: 234 GKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDV 293
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ L Y + G++E+ +E + + S P+ A + G ++
Sbjct: 294 FTYTSLLSAYSRAGKVEQAMEIYNQMRTS--NCTPNSFTFNAL---IGMHGKNKNFSEMM 348
Query: 350 VTLRNAGHVSTE----IYNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKVL 399
V + E +NSLL + K G L + M+K + D T +L
Sbjct: 349 VIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNIL 404
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 160/368 (43%), Gaps = 23/368 (6%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY- 90
E + E +P R LL + V ++E + +M + GF N +L LY
Sbjct: 232 EQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNRMKDLGFPVTTFSSNQLLLLYK 291
Query: 91 -ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ V M++ K++ P + TY + + A D E EK + K I+PD
Sbjct: 292 RLDKKKIADVLTMME--KEDVKPSIFTYKVLVDAKGMVGDVEAMEKVVESMVKDGIEPDL 349
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+T+ YI +KA T L+ ME +KNR A LL LY +G D V RIWK
Sbjct: 350 TFNATIARQYIFNGQRDKAETLLESMEGDDIQKNRAACKFLLPLYAFLGNGDAVERIWK- 408
Query: 210 MMSLFAKMNDAEYTCV--ISSLVKLGEFEKAENIYDE----WESISGTGDPRVPNILLAA 263
+ N C+ I + KLG EKAE ++++ W+++S + LL
Sbjct: 409 ----VCEDNTRIDECLSAIDAFGKLGNVEKAEKVFEDMFVKWKNLSS----KYYTALLKV 460
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y N+N L+ E R+ +G K T L Y G++EK K S++ V
Sbjct: 461 YANQNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEKAESLLHKL--SLKNNV 518
Query: 324 -PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIV 381
P + + ++GD+ +E + LR G+ +Y LL +Y A
Sbjct: 519 KPSYSSYMTLLDSYSKKGDVHNSEKVFNKLRQIGYTGRIRMYQFLLHSYLHAKAPAYGFK 578
Query: 382 ERMQKDNV 389
ERM+ DN+
Sbjct: 579 ERMKADNI 586
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 168/380 (44%), Gaps = 26/380 (6%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL-KCPLPYNHMLN 88
A E FE L + + +ALL YV +AE L E+M + GFL + P N M+
Sbjct: 216 AAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQSPFALNLMMK 275
Query: 89 LYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKID 146
LY G K +ML++ K P++ TYN+ L A D E EK F E+K
Sbjct: 276 LYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIFEEMKLNPNAK 335
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD SY TL Y+K L +KA +L ME R+ + + ++ Y +G +V R+
Sbjct: 336 PDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYMMLAYGQLGLISDVERM 395
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY---DEWESISGTGDPRVPNILLAA 263
W+K + ++ + ++ GE ++ ++++ D+W+ R N+LLA
Sbjct: 396 WQKCKMVPGDGFNS-FLAFQRAMALAGEVQRVDSMFKHMDKWKRSKTVDLKRHNNLLLAY 454
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + E+ E ++ ++ WE ++ ++ K A VRK
Sbjct: 455 YKKGMKCEIKE-LEKKMNEMDLRVTLVDWE------------KEPIKMSKAAKAVVRK-- 499
Query: 324 PDHRLITAAYNKLE---EQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLII 380
D TAA LE E+ D+ AE + ++N LL+ Y A
Sbjct: 500 -DKEKETAARKGLEEAVEKADVKAAESAFEKCKAGNMAKVGVWNKLLKAYVNAQVPAYGF 558
Query: 381 VERMQKDNVQMDAETQKVLK 400
++RM+ + V+ + ET +LK
Sbjct: 559 LQRMKAEGVEANEETHSLLK 578
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 161/373 (43%), Gaps = 11/373 (2%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ Q L E++ +P +G LL +YV +AE + KM + F
Sbjct: 214 IAKVQGLPKA--ESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPMT 271
Query: 80 PLPYNHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
P ++ ML LY I +L + +++ K+N P TY + + A ND E+
Sbjct: 272 PFAHDQMLILYKRIDKRKLADILSLME--KENVKPSPFTYKILIDAKGLCNDISGMEQVV 329
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+K I PD + S L Y+ L +KA LK+ME+ + +R+ LL LY +
Sbjct: 330 DSMKAEGIKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGAL 389
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+DEV R+WK A + E I + KL ++AE I+D + R
Sbjct: 390 QMEDEVRRLWKICE---ANPHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHY 446
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N ++ Y L + N++ G + TW+ + Y++ G++EK KA+
Sbjct: 447 NTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVKAVL 506
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKM 376
+K P ++ +GD+ E +R G+V + +L++ Y A
Sbjct: 507 QNKK-KPMFTTYITLMDRYASRGDVPNVEKNFAMMRRLGYVGRLSQFQTLIQAYVNAKAP 565
Query: 377 PLIIVERMQKDNV 389
+ ERM+ DNV
Sbjct: 566 AYGMRERMKADNV 578
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 168/378 (44%), Gaps = 42/378 (11%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQEL 106
C+ +LH+Y +N K +A A+ E+M +CG + YN ML++Y G+ DK+ +L E+
Sbjct: 235 CTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEM 294
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + D T + ++AC + A++ F+ELK + +P ++Y+ L ++ K +
Sbjct: 295 RNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIY 354
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A LKEME C + V Y+ L++ Y G+ +E + M N YT V
Sbjct: 355 SEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTV 414
Query: 226 ISSLVKLGEFEKAENIYDEWES----------------------------------ISGT 251
I++ + G+ KA ++++ + I+G
Sbjct: 415 INAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGC 474
Query: 252 GDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
R+ N LLA ++ + + + + G +P T+ L Y + G +
Sbjct: 475 PPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAK 534
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+ + + + + P A N L +GD AE +L+ +RN G E ++ +L
Sbjct: 535 MYDEMMKA--GFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHC 592
Query: 370 YAKAGKMPLIIVERMQKD 387
YAK G + + ER+ KD
Sbjct: 593 YAKGGNVRGL--ERIGKD 608
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 162/369 (43%), Gaps = 16/369 (4%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+ L A+E FF L P T + ALL + + +EA ++++M + +
Sbjct: 316 EGLINEAKE-FFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSV 374
Query: 82 PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ Y+ G ++ ++ + +K P+ VTY + A + A + F ++
Sbjct: 375 TYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQM 434
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
KK+ P+ +Y+++ +L K E+ L +M C NR+ +++LL++ + G
Sbjct: 435 KKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKH 494
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
V ++++M + + + +IS+ + G A +YDE T N L
Sbjct: 495 KFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNAL 554
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GS 318
L A R + AES + KG KP T++ L+ Y K G + + LE K I G
Sbjct: 555 LNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNV-RGLERIGKDIYDGQ 613
Query: 319 V-RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMP 377
+ WV LI A + +G E L ++N I+NS+L +AK
Sbjct: 614 IFPSWVLLRTLILANFKCRAVRGMERAFEEL---MKNGYKPDMVIFNSMLSIFAKNN--- 667
Query: 378 LIIVERMQK 386
+ ER QK
Sbjct: 668 --MYERAQK 674
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 115/272 (42%), Gaps = 9/272 (3%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G DT + L+ +Y + +A + ++M + GF C YN +LN G +L
Sbjct: 512 GKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVL 571
Query: 104 QELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+++ K P+ +++L L A + E+ ++ +I P W+ TL K
Sbjct: 572 LDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKC 631
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM----N 218
+E+ K + + V ++S+LS++ K+ + +KM+ L + +
Sbjct: 632 RAVRGMERAFEELMKNGYKPDMVIFNSMLSIFA----KNNMYERAQKMLDLIRESGLQPD 687
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y +++ + GE KAE I + D N ++ + + ++ A +
Sbjct: 688 LVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMS 747
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ T+GI PC T+ GY +G +V E
Sbjct: 748 EMTTRGICPCIFTYNTFVSGYAGRGMFAEVDE 779
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFL 77
+A + R E FE L PD +++L + +N A+ +++ + E G
Sbjct: 626 LANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQ 685
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN ++N+Y G+ K ++L+ L K SPD+V+YN + Q + A +
Sbjct: 686 PDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRV 745
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
E+ I P +Y+T S Y + + + M ++ C+ N + Y ++ Y
Sbjct: 746 MSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGY 803
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAA 123
E E++ + G+ + +N ML+++ N ++ +ML ++++ PD+VTYN +
Sbjct: 638 ERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNM 697
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
A + + AE+ L K+ PD +SY+T+ + + L ++A + EM R
Sbjct: 698 YARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPC 757
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA----- 238
Y++ +S Y G EV + M+ K N+ Y ++ K +++ A
Sbjct: 758 IFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIF 817
Query: 239 --ENIYDEWESIS 249
+NI D +++ S
Sbjct: 818 GIKNIDDSFDNHS 830
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 182/413 (44%), Gaps = 19/413 (4%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKK 60
+ R RP + +R +A +A E FE L + R +ALL SY + KK
Sbjct: 723 LSRPRPFTLTTKDNIFRMDLASRCGSVGKA-ERIFERLAPEHRSEVAYNALLLSYTKKKK 781
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNL 119
AE L +++ G + N + ++Y G +V + +E +K D+ YNL
Sbjct: 782 RGRAERLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGVELDMCFYNL 841
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL----KEM 175
L A E EK + + + + + + ++Y+ +K L + M
Sbjct: 842 LLPAKFRVQGLEEVEKLYATITSPRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQGM 901
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
E T K R Y+ L+S+Y ++ V R W+++ + N +Y C+I + KLG
Sbjct: 902 EAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQ-RQPNTEDYCCIIRAWGKLGHV 960
Query: 236 EKAENIYDEWESISGTGD-PRVPNILLAAYINRNQLEMAESFYNRLVTK-GIKP---CYT 290
+AE I+ E+ + V N ++ Y E AE R+ + G+K CY
Sbjct: 961 VRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVQRMEYELGVKLDPWCYH 1020
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSV---RKWVPDHRLITAAYNKLEEQGDIDGAEH 347
LL Y K G + K+L + A R++ P + AA N L + GD+D AE
Sbjct: 1021 HLVLL---YAKAGDIGKMLSTLRAAQAGGKKERRFTPLAATLWAALNTLADAGDVDTAEE 1077
Query: 348 LLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L + +G+ V+T +YN LLR + A + VERM D V + ET+K+
Sbjct: 1078 TLTRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLVDGVVPNGETEKLF 1130
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 171/400 (42%), Gaps = 28/400 (7%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+A + R + F+ L + D + + + Q K A+ K E + +
Sbjct: 158 RAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDITF 217
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+ + LY G +KV ++ ++++ P V N + + + +AE+ F +L
Sbjct: 218 SILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLVP 277
Query: 143 TKID---PDWISYSTLTSLYIKMELPEKAATTL----KEMEKRTCRKNRVAYSSLLSLYT 195
D +YS + + Y+ + +KA L K M++ + K R Y L+S+Y+
Sbjct: 278 AGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISMYS 337
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
M +D + R+WKK+ L A+ +Y +I S + E AE + E + P
Sbjct: 338 TMKNRDGMERVWKKIEDLKAQ----DYVAMIESCGRADEVGSAEKYFKEADRKGLLNQPS 393
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+ LL Y + Q + AE + ++ + + + + L +++ +E + A
Sbjct: 394 LFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAKNIDRAVEILELA 453
Query: 316 ------IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLL 367
G R ++ + K E GD+ AE LL R G T+I YN LL
Sbjct: 454 EAAGMRDGRSRPFLGTFCDVLKTIAK--ETGDVALAETLLADWRK-GKYRTDIAVYNHLL 510
Query: 368 RTYAKAGKM---PLIIVERMQKDNVQMDAETQKVLKITSE 404
R Y KAGK P + +R+ +N++ ET ++L+ S+
Sbjct: 511 RVYLKAGKQVQGPFL--KRLAGNNMKPTRETHQLLQQLSD 548
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 156/330 (47%), Gaps = 8/330 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+AL+ +++ + A ++++M GFL + YN M+ + S G+LD ++ +E LK
Sbjct: 142 NALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLK 201
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P V+TY + + A + A K E+ ++PD ++Y+ + K + +K
Sbjct: 202 DNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDK 261
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+ + R C+ + + Y+ LL + G E ++ +M+S+ K N ++ +I
Sbjct: 262 AFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIG 321
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L + G+ E+A N+ + D + L+A + +L++A F +++ G P
Sbjct: 322 TLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLP 381
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + G + G+ ++ LE F+K +G P+ ++ L GD A
Sbjct: 382 DIVNYNTIMAGLCRTGKADQALEVFEKLDEVG----CPPNVSSYNTLFSALWSSGDRYRA 437
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+++ L N G EI YNSL+ + G
Sbjct: 438 LEMILKLLNQGIDPDEITYNSLISCLCRDG 467
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 132/326 (40%), Gaps = 3/326 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL+ + K E+ +E M + G+ + ++ + ++ + K ++++ L++
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV YN ++ N E A + +K PD ++Y+ + + + A
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+E+ K C + Y+ L+ G D +++ +M+S + + Y +I +
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K +KA + S D NILL ++R + E + +++ G KP
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T +L + G++E+ + + + PD +G +D A L
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSM--KEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAGK 375
+ + G + + YN+++ + GK
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGK 398
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 124/297 (41%), Gaps = 2/297 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + + A L+++M G L YN ++ +DK ++L+ L
Sbjct: 210 TYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL 269
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD++TYN+ L S+ EK E+ P+ +++S L +
Sbjct: 270 SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKV 329
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A L+ M+++ + + Y L++ + G D + M+S + Y +
Sbjct: 330 EEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTI 389
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L + G+ ++A ++++ + + + N L +A + A +L+ +GI
Sbjct: 390 MAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGI 449
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECF-KKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
P T+ L + G +++ +E G R V + +I K+ D
Sbjct: 450 DPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAND 506
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 121/271 (44%), Gaps = 7/271 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL + + K +E E L+ +M G + ++ ++ +G++++ +
Sbjct: 276 PDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNL 335
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+ +K K PD Y+ +A + + A + + PD ++Y+T+ + +
Sbjct: 336 LRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR 395
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A +++++ C N +Y++L S + G + L + K+++ ++
Sbjct: 396 TGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEIT 455
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNR 279
Y +IS L + G ++A + + +S G P V NI+L N+ A
Sbjct: 456 YNSLISCLCRDGMVDEAIELLVDMQS--GRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ KG +P TT+ LL G G + +E
Sbjct: 514 MTEKGCQPNETTYILLIEGIGFSGLRAEAME 544
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 33 NFFENLPDKMRGPDT-C-SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N ++ +K PD C L+ + + + A +E M G L + YN ++
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G+ D+ ++ ++L + P+V +YN +A S D+ A + L+L IDPD
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y++L S + + ++A L +M+ R N V+Y+ +L + ++ + +
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513
Query: 210 MMSLFAKMNDAEYTCVISSL 229
M + N+ Y +I +
Sbjct: 514 MTEKGCQPNETTYILLIEGI 533
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQM-LQ 104
+ ++ + K+ +A + EK+ E G CP YN + + S+G + +M L+
Sbjct: 387 NTIMAGLCRTGKADQALEVFEKLDEVG---CPPNVSSYNTLFSALWSSGDRYRALEMILK 443
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L + PD +TYN ++ + A + ++++ + P+ +SY+ + K+
Sbjct: 444 LLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNR 503
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
A L M ++ C+ N Y L+ G + E + + + + A D+
Sbjct: 504 ANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDS 559
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 27/397 (6%)
Query: 13 AQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMS 72
A+S++ + A++ A E FE L + + +ALL YV +AE L E+M
Sbjct: 219 ARSFQLEIT-ARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMD 277
Query: 73 ECGFL-KCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDK 130
+ GFL + P N M+ LY G K +ML++ K P++ TYN+ L A D
Sbjct: 278 KAGFLSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDV 337
Query: 131 ETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
E EK F E+K PD SY TL Y+K L +KA +L ME R+ + +
Sbjct: 338 EGMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEY 397
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY---DEWE 246
++ Y +G +V R+W+K + ++ + ++ GE ++ ++++ D+W+
Sbjct: 398 MMLAYGQLGLISDVERMWQKCKMVPGDGFNS-FLAFQRAMALAGEVQRVDSMFKHMDKWK 456
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
R N+LLA Y + E+ E ++ ++ WE +
Sbjct: 457 RSKTVDLKRHNNLLLAYYKKGMKCEIKE-LEKKMNEMDLRVTLVDWE------------K 503
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLE---EQGDIDGAEHLLVTLRNAGHVSTEIY 363
+ ++ K A VRK D AA LE E+ D+ AE + ++
Sbjct: 504 EPIKMSKAAKAVVRK---DKEKEMAARKGLEEAVEKADVKAAESAFEKCKAGNMAKVGVW 560
Query: 364 NSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLK 400
N LL+ Y A ++RM+ + V+ + ET +LK
Sbjct: 561 NKLLKAYVNAQVPAYGFLQRMKAEGVEANEETHSLLK 597
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 170/357 (47%), Gaps = 6/357 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQE 105
T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++ N + V + +
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ P++VTY + + + D + A +++ KI+ + + YST+ K
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EME + R N + YSSL+S N + R+ M+ N + +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + VK G+ +AE +YDE S D + L+ + ++L+ A+ + +++K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K ++++ +E F++ S R V + T + + D D A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ + + + G H + YN+LL K GK+ +++ E +Q+ ++ T ++
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 129/285 (45%), Gaps = 3/285 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + +K P+ T S+L+ ++ ++A L+ M E + +N +++ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G+L + ++ E +K++ PD+ TY+ + + + A+ F + P+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+TL + + K + ++ +EM +R N V Y++L+ + D ++K+
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S N Y ++ L K G+ EKA +++ + NI++ +
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+E + L KG+KP + + G+ +KG E+ F+K
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 134/328 (40%), Gaps = 4/328 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
LL + + KK +L EKM G YN ++N + Q+ +L ++ K
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P +VT + L A ++ + PD I+++TL +A
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ M +R C+ N V Y +++ G D + KM + + N Y+ VI SL
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K + A N++ E E+ + + L++ N + A + ++ + I P
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ L ++K+G++ + + + + I R PD ++ N +D A+H+
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 350 -VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ + + YN+L+ + KA ++
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRI 416
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 171/363 (47%), Gaps = 12/363 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD T ++LL+ + + ++A AL+++M E G+ + + +++ L++ N + V
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + +++ PD+VTY + + D + A +++ KI+ + + YST+ K
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A EME + R N + YSSL+S N G + R+ M+ N
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNR 279
++ +I + VK G+ KAE +Y+E I + DP + L+ + ++L A+
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEM--IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
++ K P T+ L G+ K +++K +E F++ S R V + T + +
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM--SQRGLVGNTVTYTTLIHGFFQA 441
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQ 396
D D A+ + + + G H + YN LL K GK+ +++ E +Q+ ++ D T
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 397 KVL 399
++
Sbjct: 502 NIM 504
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 136/311 (43%), Gaps = 10/311 (3%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDT------CSALLHS 54
++R G Q +Y A L R + NL +KM S ++ S
Sbjct: 206 IDRMVQRGCQPDLVTYG---AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 55 YVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPD 113
+ + +A L +M G + Y+ +++ + G+ ++L + +++ +P+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
+VT++ + A + AEK + E+ K IDP+ +YS+L + + ++ +A L+
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
M ++ C N V Y++L++ + D+ + ++++M N YT +I +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+ + A+ ++ + S+ + NILL +L A + L ++P T+
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Query: 294 LLTWGYLKKGQ 304
++ G K G+
Sbjct: 503 IMIEGMCKAGK 513
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 139/330 (42%), Gaps = 4/330 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S LL + + K + EKM G YN ++N + +L +L ++ K
Sbjct: 82 SKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMK 141
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PD+VT N L N A ++ + PD ++++TL +
Sbjct: 142 LGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASE 201
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M +R C+ + V Y ++++ G D L + KM + + N Y+ VI
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
SL K + A N++ E E+ + + L++ N + A + ++ + I P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
T+ L ++KKG++ K + +++ I S+ + + + + L+ G+
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 347 HLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
L++ +V T YN+L+ + KA ++
Sbjct: 382 ELMIRKDCLPNVVT--YNTLINGFCKAKRV 409
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 116/249 (46%), Gaps = 5/249 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + +K P+ T S+L+ + ++A L+ M E + ++ +++ +
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYN-LWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G+L K ++ +E +K++ P++ TY+ L C E + L ++K + P+
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL-PN 392
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++Y+TL + + K + +K +EM +R N V Y++L+ + D ++K
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M+S+ N Y ++ L K G+ KA +++ + + D NI++
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Query: 269 QLEMAESFY 277
+ +M ++
Sbjct: 513 KWKMGGIYF 521
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 3/189 (1%)
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ +S LLS M D V+ +KM L N Y +I+ + A + +
Sbjct: 79 IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGK 138
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ D N LL + + N++ A + +++V G KP T+ L G +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIY 363
+ + + + R PD A N L ++GD D A +LL + A + IY
Sbjct: 199 ASEAVALIDRMVQ--RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 364 NSLLRTYAK 372
++++ + K
Sbjct: 257 STVIDSLCK 265
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 169/364 (46%), Gaps = 12/364 (3%)
Query: 44 GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVP 100
GP T ++LL+ + + +EA AL+++M E G+ + + +++ L+ N + V
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 101 QMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ + + K PD+VTY + + + + A +++K KI+ D + YST+
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K + A EM+ + R + YSSL+S N G + R+ M+ N
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYN 278
+ +I + K G+ +AE ++DE I + DP + N L+ + ++L+ A+ +
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEM--IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+V+K P T+ L G+ K ++ +E F+ S R V + T + +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM--SRRGLVGNTVTYTTLIHGFFQ 427
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
D D A+ + + + G H + YN+LL K GK+ +++ E +QK ++ D T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 396 QKVL 399
++
Sbjct: 488 YNIM 491
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 126/285 (44%), Gaps = 3/285 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + +K PD T S+L+ + ++A L+ M E + +N +++ +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G+L + ++ E ++++ P++VTYN + + + A++ F + PD
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+TL + + K + ++M +R N V Y++L+ + D ++K+
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S N Y ++ L K G+ EKA +++ + D NI+ +
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+E + L KG+KP + + G+ KKG E+ F K
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 148/369 (40%), Gaps = 8/369 (2%)
Query: 14 QSYRQRVAQAQALQTRARE--NFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALME 69
YR+++++ L + E + F + P S LL + + KK + E
Sbjct: 30 DGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGE 89
Query: 70 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQN 128
KM G YN M+N QL +L ++ K P +VT N L N
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 129 DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYS 188
A ++ + PD ++++TL + +A ++ M + C+ + V Y
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
++++ G D L + KM + + Y+ VI SL K + A N++ E ++
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D + L++ N + A + ++ + I P T+ L + K+G++ +
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
+ F + I R P+ + N +D A+ + + + + + YN+L+
Sbjct: 330 EKLFDEMIQ--RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 368 RTYAKAGKM 376
+ KA K+
Sbjct: 388 NGFCKAKKV 396
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 111/261 (42%), Gaps = 11/261 (4%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ +AQ + T + LPD + T + L++ + + KK + L MS G
Sbjct: 358 HDRLDEAQQIFTLMVSK--DCLPDVV----TYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ + Y +++ + D + +++ P+++TYN L E A
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F L+K+K++PD +Y+ ++ K E + + + + +AY++++S +
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G K+E ++ KM + Y +I + ++ G+ + + E S GD
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAS 591
Query: 256 ----VPNILLAAYINRNQLEM 272
V ++L +++ LE+
Sbjct: 592 TYGLVTDMLHDGRLDKGFLEV 612
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 171/380 (45%), Gaps = 8/380 (2%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E+ F +P + R + L+ + ++ + M KM E P YN ++ L+
Sbjct: 136 ESLFLRIPQEYRNELLYNNLVMACLELSLIKLSYGYMRKMRELSLPISPYVYNRLIILHS 195
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S G+ +P++L ++K + +P TYN+ L A++++ + + F ++K+ K++P+ I
Sbjct: 196 SEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNIDGVARVFNDMKRAKVEPNEI 255
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y L + L + T ++ ++ N LL LY +G + E+ W K+
Sbjct: 256 TYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWSTQEILLILYGYLGKEKELKMTW-KL 314
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
M + + +T I + K+G E+AE I+ E +S N +L+ Y +
Sbjct: 315 MQVLPHIRSKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQFNSMLSVYCRHGVV 374
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF---KKAIGS--VRKWVPD 325
+ A + + + G +P T+ L G LK G +++ L KK + + VR P
Sbjct: 375 DKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQALNTMDMGKKEVVTRKVRNSTPW 434
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLIIVERM 384
E GD++ A+ + L + + ++ +YN+LL+ Y KA V M
Sbjct: 435 LETTHMLLENFAEIGDLENAKIVYAELNESKYCRNSFVYNTLLKAYVKAKVYEPNFVRTM 494
Query: 385 QKDNVQMDAETQKVLKITSE 404
DAET +L++ +
Sbjct: 495 ILRGAMPDAETHSLLRLIEQ 514
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 170/388 (43%), Gaps = 7/388 (1%)
Query: 27 QTRARENFFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
Q +N FE ++ G SAL+ +Y ++ EA + E M G + YN
Sbjct: 200 QVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYN 259
Query: 85 HMLNLYISNG-QLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+++ G ++ ++ E+ +N PD +T+N LA C E A F E+
Sbjct: 260 AVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLY 319
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I+ D +Y+TL K + A + EM ++ N V YS+++ Y G DE
Sbjct: 320 RGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDE 379
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
L ++ +M ++ Y ++S KLG FE+A N+ E ES D N LL
Sbjct: 380 ALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLG 439
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
Y + + E + + + + I P T+ L Y K G ++ +E F++ + K
Sbjct: 440 GYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLK- 498
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIV 381
D L +A + L + G ++ A L + G + YNS++ + ++G +I
Sbjct: 499 -ADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557
Query: 382 ERMQKDNVQMDAETQKVLKITSEMPVSE 409
+ + +M + + KV++ +E V +
Sbjct: 558 PPYETNVSKMSSSSLKVVEDATESEVGD 585
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 161/347 (46%), Gaps = 8/347 (2%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAAC 124
A M+KM E G L +N ++ L+ S + +P++L ++K + + V TYN+ +
Sbjct: 203 AYMKKMRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIE 262
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
A++++ E K F E+K+ +++P+ +SY L + + +L A ++ +EK N
Sbjct: 263 ANEHNIEGLVKVFGEMKQQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNW 322
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
L+ LY +G ++ R W + L + Y I + ++G+ +AE ++ E
Sbjct: 323 STLDVLIILYGYLGKPTDLERTWGIVQEL-PHVRSKSYMLAIEAFGRIGQLNRAEELWLE 381
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+S N +++ Y ++ A + + G K T+ L G LK G
Sbjct: 382 IKSKKELKSTEQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGL 441
Query: 305 MEKVLECFKKAIG-----SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS 359
+E+ L+ + G +RK +P + E GD++ AE L L+ A +
Sbjct: 442 LEEALKTLELGKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTR 501
Query: 360 -TEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEM 405
T +YN+L++ Y KA ++ RM + DAET ++K+ +
Sbjct: 502 YTFVYNTLIKAYVKAKVYDPNLLRRMILGGARPDAETYSLMKLAEQF 548
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 168/355 (47%), Gaps = 10/355 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD T S+LL+ Y +K+ ++A AL+++M E G+ + +++ L++ N + V
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ Q +++ PD+VTY + + D + A +++ +I + + ++T+ K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E A EME + R N V Y+SL++ N G + R+ M+ N
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I + K G+ +AE +++E S D N+L+ + N+L+ A+ + +V
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K P T+ L G+ K ++E +E F++ S R V + T + GD
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM--SQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
D A+ + + + V T+I Y+ LL GK+ L+I + +QK ++++
Sbjct: 449 CDSAQMVFKQMV-SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 144/330 (43%), Gaps = 23/330 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ ++ S + + A L +M G + YN ++N + G+ ++L L+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K +P+VVT+N + A + AEK E+ + IDPD I+Y+ L + + ++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A K M + C N Y++L++ + ++ + ++++M N YT +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ G+ + A+ ++ + S D +ILL + +L+ A + L ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR-LITAAYNK--LEEQGDI-- 342
+ + G K G++ + + F S++ V + +I+ +K L+E D+
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL--SIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 343 ----DGAEHLLVTLRNAGHVSTEIYNSLLR 368
DG TL N+G YN+L+R
Sbjct: 560 KMKEDG------TLPNSG-----TYNTLIR 578
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 87/234 (37%), Gaps = 35/234 (14%)
Query: 97 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
D V +K P +V +N L+A A N E +++ I D +YS
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN----------------MGYK 200
+ + + A L +M K + V SSLL+ Y + MGYK
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 201 DEVLRIWKKMMSLFAKMNDAE-------------------YTCVISSLVKLGEFEKAENI 241
+ + LF +E Y V++ L K G+ + A N+
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
++ E+ + + N ++ + +E+A + + TKGI+P T+ L
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 160/347 (46%), Gaps = 14/347 (4%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M+KM E G+ L YN ++ + G+ + + L +K + +P V TY++ + A+
Sbjct: 189 MKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEAN 248
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+++ + KAF +KK ++P+ +SY L + L A +E+EK N
Sbjct: 249 EHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWST 308
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
L+ LY +G + E+ R W ++ F + Y + ++G ++AE ++ E +
Sbjct: 309 LDILMILYGRLGKEKELARTW-NVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMK 367
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
++ G + N LL+ Y +E A + + G KP T+ L G K M+
Sbjct: 368 NVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMK 427
Query: 307 KVLECFK--------KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV 358
+ L+ + K+IGS W+ I + E+GD++ +E L ++NA +
Sbjct: 428 EALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECF---AEKGDVENSEKLFEEVKNAKYN 484
Query: 359 STE-IYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSE 404
+YN+L + Y KA + +RM + DAE+ +LK+ +
Sbjct: 485 RYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQ 531
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 160/347 (46%), Gaps = 14/347 (4%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M+KM E G+ L YN ++ + G+ + + L +K + +P V TY++ + A+
Sbjct: 210 MKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEAN 269
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+++ + KAF +KK ++P+ +SY L + L A +E+EK N
Sbjct: 270 EHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWST 329
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
L+ LY +G + E+ R W ++ F + Y + ++G ++AE ++ E +
Sbjct: 330 LDILMILYGRLGKEKELARTW-NVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMK 388
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
++ G + N LL+ Y +E A + + G KP T+ L G K M+
Sbjct: 389 NVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMK 448
Query: 307 KVLECFK--------KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV 358
+ L+ + K+IGS W+ I + E+GD++ +E L ++NA +
Sbjct: 449 EALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECF---AEKGDVENSEKLFEEVKNAKYN 505
Query: 359 STE-IYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSE 404
+YN+L + Y KA + +RM + DAE+ +LK+ +
Sbjct: 506 RYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQ 552
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 181/414 (43%), Gaps = 21/414 (5%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKK 60
+ R RP + +R +A +A E FE L + R +ALL SY + KK
Sbjct: 723 LSRPRPFTLTTKDNIFRMDLASRCGSVGKA-ERIFERLAPEHRSEVAYNALLLSYTKKKK 781
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML--QELKKNTSPDVVTYN 118
AE L +++ G + N + ++Y +LD ML + K D+ YN
Sbjct: 782 RGRAERLFKELKATGTISSCYSLNLLASMY-RQLRLDAEVLMLAKEAQKLGVELDMCFYN 840
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL----KE 174
L L A E EK + + + + + + ++Y+ +K L +
Sbjct: 841 LLLPAKFRVQGLEDVEKLYATITSPRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQG 900
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
ME T K R Y+ L+S+Y ++ V R W+++ + N +Y C+I + KLG
Sbjct: 901 MEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQ-RQPNTEDYCCIIRAWGKLGH 959
Query: 235 FEKAENIYDEWESISGTGD-PRVPNILLAAYINRNQLEMAESFYNRLVTK-GIKP---CY 289
+AE I+ E+ + V N ++ Y E AE R+ + G+K CY
Sbjct: 960 VVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYELGVKLDPWCY 1019
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSV---RKWVPDHRLITAAYNKLEEQGDIDGAE 346
LL Y K G + K+L + A R++ P + AA N L + GD+D AE
Sbjct: 1020 HHLVLL---YAKAGDIGKMLSTLRAAQACGKKERRFTPLAATLWAALNTLADAGDVDTAE 1076
Query: 347 HLLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L + +G+ V+T +YN LLR + A + VERM D V + ET+K+
Sbjct: 1077 ETLTRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLADGVVPNGETEKLF 1130
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 171/398 (42%), Gaps = 24/398 (6%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+A + R + F+ L + D + + + Q K A+ K E + +
Sbjct: 158 RAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDITF 217
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+ + LY G +KV ++ ++++ P V N + + + +AE+ F +L
Sbjct: 218 SILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLVP 277
Query: 143 TKID---PDWISYSTLTSLYIKMELPEKAATTL----KEMEKRTCRKNRVAYSSLLSLYT 195
D +YS + + Y+ + +KA L K M++ + K R Y L+S+Y+
Sbjct: 278 AGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISMYS 337
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
M +D + R+WKK+ L A+ +Y +I S + E AE + E + P
Sbjct: 338 TMKNRDGMERVWKKIEDLKAQ----DYVAMIESCGRADEVGSAEKYFKEADRKGLLNQPS 393
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+ LL Y + Q + AE + ++ + + + + L +++ +E + A
Sbjct: 394 LFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNARNIDRAVEILELA 453
Query: 316 IGSVRKWVPDHRLITAAYNKLE----EQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRT 369
+ + + + L+ E GD+ AE LL R G T+I YN LLR
Sbjct: 454 EAAGMRDGRSRPFLGTFCDVLKTIARETGDVALAETLLADWRK-GKYRTDIAVYNHLLRV 512
Query: 370 YAKAGKM---PLIIVERMQKDNVQMDAETQKVLKITSE 404
Y KAGK P + +R+ +N++ ET ++L+ S+
Sbjct: 513 YLKAGKQVQGPFL--KRLAGNNMKPTRETHQLLQQLSD 548
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 11/362 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + + +P+ RG LL ++V AEA+ KM + GF N ML LY
Sbjct: 243 EAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYK 302
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L K+N P++ TY + + S ND E+ +K ++ D +
Sbjct: 303 RVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRA 362
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ + Y L EKA LKEME + +NR LLS+Y + +DEV R+WK
Sbjct: 363 RALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKIC- 421
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEK---AENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ Y V+++++ G+ +K AE ++++ +S V ++LL Y++
Sbjct: 422 -----EENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHK 476
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ + ++ G TW+ + Y++ G++EK KAI S ++ P
Sbjct: 477 MVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQS-KQIKPLMSS 535
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKMPLIIVERMQKD 387
++ +GD+ E + ++ AG+ S Y +L++ Y A + ERM+ D
Sbjct: 536 FMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKAD 595
Query: 388 NV 389
N+
Sbjct: 596 NI 597
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 170/362 (46%), Gaps = 10/362 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD T S+LL+ Y K+ +EA AL+++M + + +N +++ L++ N + V
Sbjct: 132 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 191
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + + + PD+ TY + + D + A +++K KI+ D + Y+T+
Sbjct: 192 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 251
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A EM+ + R N V Y+SL+ N G + R+ M+ N
Sbjct: 252 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 311
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++ +I + VK G+ +AE +YDE S D + L+ + ++L+ A+ + ++
Sbjct: 312 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 371
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K P T+ L G+ K ++E+ +E F++ S R V + L + GD
Sbjct: 372 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQAGD 429
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQK 397
D A+ + + + G V +I Y+ LL K GK+ L++ E +QK ++ D T
Sbjct: 430 CDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 488
Query: 398 VL 399
++
Sbjct: 489 IM 490
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 9/332 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + +K P+ T ++L+ + ++A L+ M E + ++ +++ +
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G+L + ++ E +K++ PD+ TY+ + + + A+ F + P+
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 379
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+TL + K + E+ +EM +R N V Y++L+ G D +I+KK
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S + Y+ ++ L K G+ EKA +++ + D NI++ +
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHR 327
+E + L KG+KP + + G+ +KG E+ F+ K G++ +
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 559
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS 359
LI A GD + L+ +R+ G V
Sbjct: 560 LIRARL----RDGDKAASAELIKEMRSCGFVG 587
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 112/274 (40%), Gaps = 7/274 (2%)
Query: 80 PLP----YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAE 134
PLP +N +L+ + D V + + ++ S D+ +YN+ + ++ A
Sbjct: 60 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 119
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
++ K +PD ++ S+L + Y + +A + +M + N V +++L+
Sbjct: 120 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 179
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
E + + +M++ + + Y V++ L K G+ + A ++ + E D
Sbjct: 180 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 239
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ ++ A N + A + + + KGI+P T+ L G+
Sbjct: 240 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 299
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
I RK P+ +A + ++G + AE L
Sbjct: 300 MIE--RKINPNVVTFSALIDAFVKEGKLVEAEKL 331
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 170/362 (46%), Gaps = 10/362 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD T S+LL+ Y K+ +EA AL+++M + + +N +++ L++ N + V
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + + + PD+ TY + + D + A +++K KI+ D + Y+T+
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A EM+ + R N V Y+SL+ N G + R+ M+ N
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++ +I + VK G+ +AE +YDE S D + L+ + ++L+ A+ + ++
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K P T+ L G+ K ++E+ +E F++ S R V + L + GD
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQK 397
D A+ + + + G V +I Y+ LL K GK+ L++ E +QK ++ D T
Sbjct: 446 CDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 398 VL 399
++
Sbjct: 505 IM 506
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 9/332 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + +K P+ T ++L+ + ++A L+ M E + ++ +++ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ G+L + ++ E +K++ PD+ TY+ + + + A+ F + P+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+TL + K + E+ +EM +R N V Y++L+ G D +I+KK
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S + Y+ ++ L K G+ EKA +++ + D NI++ +
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHR 327
+E + L KG+KP + + G+ +KG E+ F+ K G++ +
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS 359
LI A GD + L+ +R+ G V
Sbjct: 576 LIRARL----RDGDKAASAELIKEMRSCGFVG 603
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 61/338 (18%), Positives = 130/338 (38%), Gaps = 43/338 (12%)
Query: 80 PLP----YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAE 134
PLP +N +L+ + D V + + ++ S D+ +YN+ + ++ A
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIK----------------MEL-------------- 164
++ K +PD ++ S+L + Y ME
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 165 -----PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+A + M R C+ + Y ++++ G D L + KKM + +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +I +L A N++ E ++ + N L+ N + A +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
++ + I P T+ L ++K+G++ + + + + I R PD ++ N
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMH 373
Query: 340 GDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+D A+H+ + + + YN+L++ + KA ++
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 159/344 (46%), Gaps = 8/344 (2%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M+KM E G+ L YN ++ + G+ + + L +K + +P V TY++ + A+
Sbjct: 191 MKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEAN 250
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+++ + KAF +KK ++P+ +SY L + L A +E+EK N
Sbjct: 251 EHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWST 310
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
L+ LY +G + E++R W ++ F + Y + ++G ++AE ++ E +
Sbjct: 311 LDILMILYGRLGKEKELVRTW-NVIRGFHHVRSKSYLLATEAFAQVGNLDRAEELWLEMK 369
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
++ G + N LL+ Y +E A + ++ G KP T+ L G K M+
Sbjct: 370 NVRGLKETEQFNSLLSVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHLALGCAKAKLMK 429
Query: 307 KVLECFK-----KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+ L+ + K S+R P + E+GD++ +E L ++NA +
Sbjct: 430 EALKNIEMGSNLKTSNSIRSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYA 489
Query: 362 -IYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSE 404
+YN+L + Y KA + +RM + DAE+ +LK+ +
Sbjct: 490 FVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQ 533
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 11/362 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + + +P+ RG LL ++V AEA+ KM + GF N ML LY
Sbjct: 214 EAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYK 273
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L K+N P++ TY + + S ND E+ +K ++ D +
Sbjct: 274 RVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRA 333
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ + Y L EKA LKEME + +NR LLS+Y + +DEV R+WK
Sbjct: 334 RALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKIC- 392
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEK---AENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ Y V+++++ G+ +K AE ++++ +S V ++LL Y++
Sbjct: 393 -----EENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHK 447
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ + ++ G TW+ + Y++ G++EK KAI S ++ P
Sbjct: 448 MVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQS-KQIKPLMSS 506
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKMPLIIVERMQKD 387
++ +GD+ E + ++ AG+ S Y +L++ Y A + ERM+ D
Sbjct: 507 FMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKAD 566
Query: 388 NV 389
N+
Sbjct: 567 NI 568
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 170/386 (44%), Gaps = 14/386 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E+ F +P + R + L+ + + + A M KM E P YN ++ L+
Sbjct: 133 ESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPISPYVYNRLIILHS 192
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S G+ + ++L ++K + P TYN+ L A++++ + + F +K+ KI+P+ I
Sbjct: 193 SPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVFNGMKRAKIEPNEI 252
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y L + L T ++ +E N LL LY +G + E+ R W+ M
Sbjct: 253 TYGILAIAHAVARLYTVCHTYVEAIENSMTGTNWSTLEILLILYGYLGKEKELKRTWEIM 312
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
L + +T I + K+G ++AE I+ +S N +L+ Y +
Sbjct: 313 QDL-PHIRSKSFTLAIEAFGKVGSIDQAEKIWIHIKSTKKLSLTEQFNSMLSVYCRHGVV 371
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL--------ECFKKAIGSVRKW 322
+ A S + + G +P T+ L G LK G +++ L E K + S W
Sbjct: 372 DKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDMGKKEVVTKKVRSSTPW 431
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLIIV 381
+ L+ + E GD++ A+ L L + + +++ +YN+LL+ Y KA +
Sbjct: 432 LETTHLLLENF---AEIGDLENAKRLYSELNESKYSLNSFVYNTLLKAYVKAKVYEPDLS 488
Query: 382 ERMQKDNVQMDAETQKVLKITSEMPV 407
M DAET +L++ + +
Sbjct: 489 RTMILRGAMPDAETYSLLRLIEQFKI 514
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 158/362 (43%), Gaps = 11/362 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + +++P RG LL + V ++E + KM + GF N +L LY
Sbjct: 232 EKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEVFNKMKDLGFPVTVFAINQLLLLYK 291
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ K+ +L +++K N P + TY L + + D EK ++ ++PD +
Sbjct: 292 RVDK-KKIADVLAKMEKENVKPSLFTYKLLVDTKGAIRDIAGMEKVVESMQAEGVEPDLL 350
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+T+ YI EKA L+ ME + NR A LL LY +G KD+V R+W+
Sbjct: 351 FQATIAKHYIFAGHREKAEAILESMEGGDIKGNRNACKILLPLYAFLGKKDDVERMWQ-- 408
Query: 211 MSLFAKMNDAEYTCV--ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ N C+ I S +LG+ E+AE ++++ + T + N L+ Y ++N
Sbjct: 409 ---VCEANPRLDECLSAIESFGRLGDVERAEKVFEDMFATWKTLSSKFYNALMKVYADQN 465
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ + R+ G + +T + L Y+ G+++K K + K P +
Sbjct: 466 LFKKGKELAKRMDEDGCRLGISTIDSLVKLYVGAGEVDKAESILHK-LSKSNKMKPQYSS 524
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQKD 387
+ ++GDI +E + LR G+ Y LL Y A ERM+ D
Sbjct: 525 YLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQYQLLLNAYVHAKTPVYGFRERMKAD 584
Query: 388 NV 389
N+
Sbjct: 585 NI 586
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 146/332 (43%), Gaps = 8/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQMLQE 105
+ LL +++ EA L+ M + C + YN ++N + + GQ+DK + E
Sbjct: 159 NTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLE 218
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ SPDVVTYN + + + AE F ++ + + P+ ++Y+T+ K +
Sbjct: 219 M--GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEV 276
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A ++M + + + V Y++++ D ++++M+ K + Y +
Sbjct: 277 DMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI 336
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K +KAE ++ + D I++ ++ AE + +++ KG+
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP T+ L GYL GQ E+V++ K+ S PD + L + G + A
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEM--SAHDLEPDVFTYGLLLDYLCKNGKCNEA 454
Query: 346 EHLLVT-LRNAGHVSTEIYNSLLRTYAKAGKM 376
L + +R S IY +L Y K G +
Sbjct: 455 RSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 150/348 (43%), Gaps = 6/348 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + ++ + ++ AE + ++M E G + YN +++ ++D +
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGV 282
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q++ K P VTYN + + AE F ++ + PD ++Y+T+ K
Sbjct: 283 FQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCK 342
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +KA ++M + + + + Y+ ++ D ++++M+ K N+
Sbjct: 343 AQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGT 402
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y C+I + G++E+ E + D +LL + A S ++ ++
Sbjct: 403 YNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI 462
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
KGIKP T + ++ GY KKG + ++ + + + P+HR+ ++
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN--GISPNHRIFNTVICAYAKRAM 520
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLIIVERMQKDN 388
ID H+ + ++ G + Y +L+ K G++ +++ Q N
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMIN 568
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 16/365 (4%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+ +AQA+ E F+ + DK PD T + ++ + + AE + ++M + G
Sbjct: 340 LCKAQAIDKA--EGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK 397
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKA 136
YN +++ Y+S GQ ++V Q ++E+ + PDV TY L L A
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSL 457
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
F + + I P Y + Y K + L M N +++++ Y
Sbjct: 458 FDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAK 517
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
DEV+ I+ KM N Y +I +L KLG + A +++ + T + V
Sbjct: 518 RAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVV 577
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
N L+ ++ E E + ++ +GI+P + + K+G++ + +
Sbjct: 578 FNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV 637
Query: 317 GSVRKWVPDHRLITAAYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
K PD +YN L + +D A LL + +AG + YN+LL Y
Sbjct: 638 CMGLK--PD----VISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYC 691
Query: 372 KAGKM 376
KAG++
Sbjct: 692 KAGRI 696
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 132/312 (42%), Gaps = 7/312 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T LL +N K EA +L + M G Y ML+ Y G L ++ +
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L + N SP+ +N + A A + + F+++K+ + P+ ++Y TL K
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A +M N V ++SL+ + ++V ++ +M++ + +
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ V+ +L K G +A + D + D N L+ + ++++ A + +V
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQG 340
+ G+KP ++ L GY K G+++ F++ + RK V P N L G
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML---RKGVTPGVETYNTILNGLFRSG 729
Query: 341 DIDGAEHLLVTL 352
A L V +
Sbjct: 730 RFSEARELYVNM 741
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 154/392 (39%), Gaps = 45/392 (11%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK-VPQMLQELK 107
+ ++ +Y + E + KM + G + Y +++ G++D V Q Q +
Sbjct: 509 NTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMIN 568
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI---------------------- 145
+ +P+ V +N + + + E E+ FLE+ I
Sbjct: 569 EGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVME 628
Query: 146 -------------DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
PD ISY+TL + ++A L M + N V+Y++LL
Sbjct: 629 ARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLH 688
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
Y G D ++++M+ Y +++ L + G F +A +Y
Sbjct: 689 GYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLW 748
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+I+L + N + A + L + ++ T+ ++ G K G+ E ++ F
Sbjct: 749 SICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLF 808
Query: 313 KK--AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRT 369
A G V V +RLI L E+G ++ + L + +G ++ + N+L+R
Sbjct: 809 AAIPANGLVPSVVT-YRLIA---ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRK 864
Query: 370 YAKAGKMPL--IIVERMQKDNVQMDAETQKVL 399
G++P + ++ + N ++A T +L
Sbjct: 865 LLDRGEIPRAGAYLSKLDEKNFSLEASTTSML 896
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 116/298 (38%), Gaps = 40/298 (13%)
Query: 96 LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT--KIDPDWISYS 153
+ + +ML++ +PD TY++ + E AF + KT ++D D +
Sbjct: 66 VSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVD-DIVVNQ 124
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-- 211
L L + E L++M + CR V+Y++LL + +E + M+
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184
Query: 212 -----------------------------SLFAKM----NDAEYTCVISSLVKLGEFEKA 238
SLF +M + Y +I L K E ++A
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRA 244
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
E+++ + + N ++ +++MAE + ++V KG+KP T+ + G
Sbjct: 245 EDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDG 304
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
K +++ F++ I R PDH + L + ID AE + + + G
Sbjct: 305 LCKAQAVDRAEGVFQQMID--RGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG 360
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 156/359 (43%), Gaps = 6/359 (1%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + E++P+ RG LL + E + KM + N +L LY
Sbjct: 230 EKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKDLDLPLTAFACNQLLLLYK 289
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L K+N P + TY + + + ND E+ F +K+ +PD
Sbjct: 290 KLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGMEQVFETMKEEGFEPDIQI 349
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ L Y L EKA LKEME ++N+ ++LL LY N+G DEV RIWK
Sbjct: 350 QALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCATLLRLYANLGKADEVERIWKVCE 409
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S K + + + KL + E+AE ++ E S + + ++LL Y N L
Sbjct: 410 S---KPRVEDCLAAVEAWGKLNKIEEAEAVF-EMVSKKWKLNSKNYSVLLKIYANNKMLT 465
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
+ + G++ TW+ L Y++ G++EK KAI + P A
Sbjct: 466 KGKELVKLMADSGVRIGPLTWDALVKLYIQAGEVEKADSILHKAIQQ-NQLQPMFTTYLA 524
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
+ ++GD+ +E + + +R AG+ S + L++ Y A I ER++ DN+
Sbjct: 525 ILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAYGIRERIKADNL 583
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 159/345 (46%), Gaps = 8/345 (2%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M+KM E G L +N ++ L+ S G +P++L +++ + P V TYN+ + A+
Sbjct: 180 MKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEAN 239
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+++ + K F ++K+ K++P+ +S+ L + + L A ++ +EK N
Sbjct: 240 EHNIDGLVKVFNDMKRFKVEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDNWST 299
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
L+ LY ++G + E+ R W ++ L + Y I + K+G+ +AE ++ E +
Sbjct: 300 LDVLIILYGHLGKEKELERTWGIVLEL-PHVRSKSYMLAIEAYGKIGQLSRAEELWLEMK 358
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
SI G N +L+ Y ++ A + + G K T+ L G LK +E
Sbjct: 359 SIHGLRSTEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLVE 418
Query: 307 ---KVLECFKKAIGS--VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-ST 360
K LE K S V+ P + E+GD+ E L L A ++ T
Sbjct: 419 EALKTLEMGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYIRHT 478
Query: 361 EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEM 405
++N L++ Y KA ++ RM + DAET ++K+ +
Sbjct: 479 FVFNILIKAYVKAKIYSPNLLRRMILGGARPDAETYSLIKLAEQF 523
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 156/353 (44%), Gaps = 7/353 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+ +YV + ++A +++ M E L +N + +LY + + D +P +L+E++
Sbjct: 114 MFENYVIHSLLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMR 173
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKA 168
SP+V TYN+ + A + D E E+ F ++K P+ TL S Y+ EKA
Sbjct: 174 ISPNVETYNILIGIKAKKGDTEGMERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKA 233
Query: 169 ATTLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
LKE + R++R + +++LY MG D + RIW+ F ++ Y I+
Sbjct: 234 MAYLKEAVASDEFRESRRVHDKVIALYAAMGRADMIDRIWR-FTRRFPVVSANSYVATIA 292
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ K+G ++AE ++ E P L AY ++ AE R+
Sbjct: 293 AYEKVGRIDRAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHI 352
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ L GY+K G + E + + P + + + D++ AE
Sbjct: 353 NNLSYHHLVAGYMKSGNPKMAAETLTRMFEE--RVPPCFDTVMLILKEHAKNADVNSAEL 410
Query: 348 LLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L +R + + YNSLL Y AGK ++RM D V +A T ++L
Sbjct: 411 LFQDMRRESYNKNVAAYNSLLEAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 14/352 (3%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAAC 124
A M KM E P YN ++ L+ S + + ++L ++K + +P TYN+ L
Sbjct: 174 AYMRKMRELSLPISPYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQ 233
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
A++++ + + F ++K+ KI+P+ I+Y L + L T ++ +E N
Sbjct: 234 ANEHNIDGLARVFSDMKRAKIEPNEITYGILAISHAVARLYTVCHTYVEAIENSMTGTNW 293
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
LL LY +G + E+ R W+ M L + +T I + K+G ++AE I+ +
Sbjct: 294 STLEILLILYGYLGKEKELKRTWEIMQDL-PHVRSKSFTVAIEAFGKVGSIDQAEKIWVQ 352
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+S N +L+ Y ++ A S + + G +P T+ L G LK G
Sbjct: 353 IKSTKKLSLTEQFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGL 412
Query: 305 MEKVL--------ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+++ L E K + S W+ L+ + E GD++ A+ L L +
Sbjct: 413 VKEALNTIDMGKKEVVTKKVRSSTPWLETTHLLLENF---AEIGDLENAKRLYSELNESK 469
Query: 357 HV-STEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPV 407
+ ++ +YN+LL+ Y KA ++ M DAET +L++ + +
Sbjct: 470 YSRNSFVYNTLLKAYVKAKVYEPDLLRTMILRGAMPDAETYSLLRLIEQFKI 521
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 167/392 (42%), Gaps = 23/392 (5%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY---NHMLNLY 90
+ + +P R LL + V+ + +AE + ++ + L PL N M+ LY
Sbjct: 198 YIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFREIRD---LSLPLTVSACNQMILLY 254
Query: 91 --ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ ++ + +++ K+N P TY L + ND E E+K ++PD
Sbjct: 255 KRVARTKVADIIMLME--KENIKPSPFTYKLIIDLKGRSNDISGVEVTLNEMKAAGVEPD 312
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++ + + YI L EKA + E+E + R A SLL LY + DEV RIWK
Sbjct: 313 FVTQTMVAKFYISGGLIEKAKAVVSEIEMEYMKDKRHAVRSLLHLYAALSKPDEVARIWK 372
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ K++D + I + KLG E+AE ++ + + N +L Y
Sbjct: 373 --LCTEPKLDD--FMAAIEAWGKLGCIEQAEETFEAMLEATQKLSSKYYNGMLNVYAENK 428
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
++ + F R+ G TW+ L Y+ G++ K + A + PD R
Sbjct: 429 LMDKGKKFVERMSFDGCPNGPLTWDALVKLYVNSGEVAKADSFLQNAT----EQNPDRRP 484
Query: 329 ITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKMPLIIVER 383
+Y L + GDI AE + L+N + + Y LL Y A P +ER
Sbjct: 485 TYGSYIYLLMAYAKMGDIYNAEKMFDRLKNIRYPGRKPPYPVLLEAYVNAKVRPHGFIER 544
Query: 384 MQKDNVQMDAETQKVLKITSEMPVSEVSSIFS 415
M+ D V+ + + LK ++P V +
Sbjct: 545 MRADGVRPIKKVMEHLKFLGKLPRGGVPQLIG 576
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 23/368 (6%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + + +P +G LL + V + +AE + KM + F P N +L LY
Sbjct: 175 EVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPITPFACNQLLLLY- 233
Query: 92 SNGQLDK---VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+LDK +L K+N P + TY + + ND ++ +K I+PD
Sbjct: 234 --KRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVETMKAEGIEPD 291
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+ + + Y+ L EKA LKEME ++R A +L LY +G DEV R+WK
Sbjct: 292 IRTQAIMARHYVSGGLKEKAEAILKEMEGGNLEEHRWACRFMLPLYGALGKADEVSRVWK 351
Query: 209 KMMSLFAKMNDAEYTCV--ISSLVKLGEFEKAENIYD----EWESISGTGDPRVPNILLA 262
F + + C+ I + +L + ++AE +++ W+ +S R + LL
Sbjct: 352 -----FCEKSPRLDECMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSS----RHYSTLLK 402
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
Y N L + R+ G + TW+ L Y++ G++EK KA+ K
Sbjct: 403 VYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSILNKAVQQ-NKI 461
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLIIV 381
P + + +GDI AE + +R AG+ + +L++ Y A +
Sbjct: 462 KPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQFQTLIQAYIIAKAPCYGMR 521
Query: 382 ERMQKDNV 389
ER++ D +
Sbjct: 522 ERLKADGI 529
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 162/380 (42%), Gaps = 20/380 (5%)
Query: 15 SYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSEC 74
S+ VA+ ++ A E + E +P+ R LL + V + +AE + ++ E
Sbjct: 37 SHLDLVARNHGIE--AAEKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIREL 94
Query: 75 GFLKCPLPYNHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKET 132
N ML LY +S ++ + ++++ +N P + TY L + ND
Sbjct: 95 SLPLTVSACNQMLLLYKRVSRNKVVDILKLME--NENIKPSLFTYKLMIDLKGRSNDTLG 152
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
E +K+ +PD+ + + YI +L EKA ME NR A SLL
Sbjct: 153 MESVLNLMKENGFEPDFGIQTMVAKFYISGDLAEKAEEVTNAMEV-YVNANRHAIRSLLD 211
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
LY +G D+V RIW + K+ D + I + KLG E+AE +D S
Sbjct: 212 LYAILGRPDDVERIWN--LCTEPKLED--FLAAIKAWGKLGHIERAEETFDALVKTSPKL 267
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ N +L Y L+ + F R+ G TW+ + Y+ G++ K + F
Sbjct: 268 TSKYFNAMLYVYAENELLDKGKKFIERMSLDGCPSSPLTWDAVVKLYVNSGELAKA-DSF 326
Query: 313 KKAIGSVRKWVPDHRLITAAY----NKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
+ +V + PD + +Y E+GDI AE + L+ + + + YN LL
Sbjct: 327 ---LANVTEDNPDRYPLFRSYVILLKAFAEKGDIHNAEKIFNRLKQTSYPARTLPYNLLL 383
Query: 368 RTYAKAGKMPLIIVERMQKD 387
YA A P ERM+ D
Sbjct: 384 AAYANAQVTPYGFRERMKAD 403
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 160/362 (44%), Gaps = 12/362 (3%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + E++P+ RG LL + +E + KM + N +L LY
Sbjct: 221 EKYIESVPESFRGELLYRTLLANCASQNNLIASEKIFNKMKDLDLPLTVFACNQLLLLYK 280
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L K+N P + TY + + + ND E+ F +K+ +PD
Sbjct: 281 KLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGHSNDIAGMEQVFETMKEEGFEPDIQL 340
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ L Y L EKA LKE+E + + ++LL LY N+G DEV RIWK
Sbjct: 341 QALLARHYTSAGLKEKAEAILKEIEGENLEEKQWVCATLLRLYANLGKADEVERIWKVCE 400
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S +++D + + KL + E+AE ++ E S + + +ILL Y N L
Sbjct: 401 SK-PRVDDC--LAAVEAWGKLEKIEEAEAVF-EMASKKWKLNSKNYSILLKIYANNKMLA 456
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
+ R+ G++ TW L Y++ G++EK +KAI + + T
Sbjct: 457 KGKDLIKRMADSGLRIGPLTWNALVKLYIQAGEVEKADSVLQKAIQQSQL----QPMFTT 512
Query: 332 AYNKLEE---QGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQKD 387
+ LE+ +GD+ +E + + +R AG+ S + L++ Y A I ERM+ D
Sbjct: 513 YLDILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFKVLMQAYVNAKVPAYGIRERMKAD 572
Query: 388 NV 389
N+
Sbjct: 573 NL 574
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 168/394 (42%), Gaps = 45/394 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDKVPQM 102
T + ++HSY ++ + +A+ ++ +M + +C P +N +++ G +D +
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEK----RCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + K P +VT+N L + A++ F + + + PD S++ L + +
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E+A KEM++R + V++S L+ L++ G D ++M L +
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT VI + G +A + DE + D N LL +++L AE N +
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----------------GSVRK---- 321
+G+ P T+ L GY + G EK L+ F + G RK
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454
Query: 322 -----W--------VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
W P+H + + E+G ++ A L + + G++ + YNS++
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514
Query: 368 RTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+ Y ++G K +++M +DN+ D T L
Sbjct: 515 KGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTL 548
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 6/345 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F++ + + PD S L+ + K A A + +M G + + Y ++ +
Sbjct: 284 FYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFC 343
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + ++ E+ PDVVTYN L Q+ AE+ E+K+ + PD
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++TL Y + EKA + + R + VAY+SL+ G + +W M
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ N Y+ +I S + G+ E+A DE S + N ++ Y +
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ + F +++ I P T+ L GY+K+ M F I PD
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN--IMEKEMVQPDAVTYN 581
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
N EQG+++ A + + +G Y SL+ + AG
Sbjct: 582 MIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAG 626
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ S+ + + EA +++M G L + YN ++ Y +G + K Q LQ++
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ N PD++T+N + + + A F ++K + PD ++Y+ + + + +
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
E+A K+M +R Y SL++ + G E ++ +MM
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMM 639
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+ L + PD + +L+ + A+A L + M + Y+ +++ +
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELKKTKIDPDW 149
GQ+++ L E+ K P+++TYN + C S N K+ ++ ++ + I PD
Sbjct: 484 EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKK-GQQFLQKMMQDNILPDL 542
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+++TL YIK E A MEK + + V Y+ +++ ++ G +E R++KK
Sbjct: 543 ITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKK 602
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
M + + + Y +I+ V G ++A ++DE
Sbjct: 603 MGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 3/245 (1%)
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
AE+A+ + + + + + + + Y K +KA T + EMEKR + V ++ L+
Sbjct: 141 AEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID 200
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
G D + + M + K + V+ L K F+KA+ ++ + S
Sbjct: 201 ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAP 260
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D R NIL+ + ++E A FY + +G+ P ++ L + +G+M+
Sbjct: 261 DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYL 320
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
++ G VPD + T G + A + + G + + YN+LL
Sbjct: 321 REMKG--LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLC 378
Query: 372 KAGKM 376
K ++
Sbjct: 379 KQHRL 383
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 140/340 (41%), Gaps = 16/340 (4%)
Query: 45 PDTCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
P L+ +Y Q++K EA EA + + P+P + L + + P +
Sbjct: 87 PQVFDLLIRTYTQSRKPREAFEAFRLLLDH----RVPVPASASNALLAALSRA-GWPHLA 141
Query: 104 QE-----LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+E L ++ + T N+ + + + + A+ E++K + PD ++++ L
Sbjct: 142 EEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDA 201
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ + A + M + + V ++S+L D+ +++ M +
Sbjct: 202 RFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPD 261
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ +I ++GE E+A Y E + T D + L+ + R +++ A ++
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+ G+ P + ++ G+ + G M + L + +G +PD N L +
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG--LGCLPDVVTYNTLLNGLCK 379
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
Q + AE LL ++ G V+ ++ + +L+ Y + G
Sbjct: 380 QHRLLDAEELLNEMKERG-VTPDLCTFTTLIHGYCRDGNF 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
NLP+ M T ++++ Y ++ + + ++KM + L + +N +++ YI +
Sbjct: 503 NLPNIM----TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENM 558
Query: 97 DKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
+ ++K PD VTYN+ + + Q + E A + F ++ + I+PD +Y +L
Sbjct: 559 HGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSL 618
Query: 156 TSLYIKMELPEKAATTLKEMEKR 178
+ ++ ++A EM R
Sbjct: 619 INGHVTAGNSKEAFQLHDEMMHR 641
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 166/373 (44%), Gaps = 14/373 (3%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ L E F E +P+ RG LL S V +AE++ KM + G P+
Sbjct: 61 AKVLGLWKAEKFIEKIPESFRGKLVYQTLLASCVSVLNIKKAESVFRKMRDLGL---PIT 117
Query: 83 YNHMLNLYISNGQLDK--VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ I +L+K +P +L +K +N P +TY L + A ND EK
Sbjct: 118 VEACEQMIIIYKRLEKKKIPNILLMMKDQNIKPSFLTYKLLIDAKCQFNDTTGMEKLVEA 177
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV-AYSSLLSLYTNMG 198
++ ++ D + + + YI + L +KA LK++EKR + + A SLLSLY ++G
Sbjct: 178 MRNEGMELDVFALAVIARHYISVGLKDKADLILKQIEKRKQKGGGLGARRSLLSLYASLG 237
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
DEV RIWK+ A +E I + KLG+ E+AE + +
Sbjct: 238 NADEVGRIWKECK---ADPKQSECIAAIRAWGKLGKVEEAEAVSEMMLQTWKNPTFGYYT 294
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LL YI+ N + ++ G TW+ L Y+K G +EK K +
Sbjct: 295 SLLNVYIDNNLTSKGKDLVEQMGDIGSWAGPLTWDALVRLYIKSGDVEKAHSILLK-VAR 353
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKMP 377
+++ P + A ++GDI E L ++R G+ + + + L+ Y A K P
Sbjct: 354 MKRKRPLYTTCIAVMEHYAKRGDIHNTEKLFQSMRELGYTARFKPFEILVDAYINA-KTP 412
Query: 378 LI-IVERMQKDNV 389
+ + RM+ DN+
Sbjct: 413 IYGLRARMKADNL 425
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 23/379 (6%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ + LQ E + E +P ++G LL + V + +A + KM +
Sbjct: 82 IAKVRGLQKA--EVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMKDLELPIT 139
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
YN +L LY + + +L K+N P + TY L + ND E+
Sbjct: 140 LFSYNQLLLLYKRHDKKKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIAGMEQIAET 199
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K I+PD + + + Y+ L EKA LKEME ++R A +L LY +G
Sbjct: 200 MKAEGIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEHRWACQFMLPLYGTLGK 259
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCV--ISSLVKLGEFEKAENIYD----EWESISGTGD 253
DEV R+WK F K + C+ I + +L + +AE +++ W+ +S
Sbjct: 260 ADEVSRLWK-----FCKKSPRLDECMAAIEAWGQLKKIPEAEAVFELMSKTWKKLSS--- 311
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ + LL Y N L + ++ G + TW+ L Y++ G++EK
Sbjct: 312 -KHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVEKADSILN 370
Query: 314 KAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTY 370
KA+ ++ + +I Y K +GDI AE + +R AG+ ++ + +L++ Y
Sbjct: 371 KAVQQNQMKPMFSSYMIIMEKYAK---KGDIHNAEKMFHRMRQAGYQARSKQFQTLIQAY 427
Query: 371 AKAGKMPLIIVERMQKDNV 389
A + ER++ D +
Sbjct: 428 INAKAPCYGMRERLKADGL 446
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 9/348 (2%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F L + D S +L+ ++ + + EA + +KM E G + YN +LN++
Sbjct: 194 NLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVF 253
Query: 91 ISNGQ-LDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
G +K+ +++++K + +PD TYN + C + + A + F E+K D
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHD 313
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++Y+ L +Y K P++A L EME + V Y+SL+S Y G DE + +
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M K + YT ++S + G+ E A NI++E + + N + Y NR
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ ++ + G+ P TW L + + G +V FK+ + +VP+
Sbjct: 434 KFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA--GFVPERET 491
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
+ G + A + + +AG V+ ++ YN++L A+ G
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALARGG 538
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L ++ PD T ++++ Y + + +A +++ M E GF YN ++ +
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYM 673
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ + K ++L+E L K PD+++YN + A A + F E++ + I PD
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPD 733
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I+Y+T Y + E+A ++ M K CR N+ Y+S++ Y + KDE
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 162/380 (42%), Gaps = 42/380 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL Y ++ + EA ++ +M GF + YN +++ Y +G LD+ ++ ++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK--------------------- 144
+K T PDV TY L+ E+A F E++
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 145 --------------IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ PD ++++TL +++ + + + + KEM++ R +++L
Sbjct: 436 VDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+S Y+ G ++ + ++++M+ + + Y V+++L + G +E++E + E E
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ LL AY N ++ + S + + I+P + L K + +
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRT 369
F + R + PD + + + + + A +L ++ G S YNSL+
Sbjct: 616 AFSEL--KERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYM 673
Query: 370 YAKA---GKMPLIIVERMQK 386
++++ GK I+ E + K
Sbjct: 674 HSRSADFGKSEEILREILAK 693
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 20/255 (7%)
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+A F L++ D SY++L S + +A K+ME+ C+ + Y+ +L
Sbjct: 191 SAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVIL 250
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMN------DA-EYTCVISSLVKLGEFEKAENIYDE 244
+++ MG W K+ SL KM DA Y +I+ + ++A +++E
Sbjct: 251 NVFGKMGTP------WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
++ + D N LL Y ++ + A N + G P T+ L Y + G
Sbjct: 305 MKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGM 364
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG---HVSTE 361
+++ +E + K PD T + E G ++ A ++ +RNAG ++ T
Sbjct: 365 LDEAMELKNQMAEKGTK--PDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICT- 421
Query: 362 IYNSLLRTYAKAGKM 376
+N+ ++ Y GK
Sbjct: 422 -FNAFIKMYGNRGKF 435
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLE 139
L Y +L+ Y + ++ + + +E+ P V + C+ + AE+AF E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT---N 196
LK+ PD + +++ S+Y + ++ KA L M++R + Y+SL+ +++ +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G +E+LR ++++ K + Y VI + + A I+ E D
Sbjct: 680 FGKSEEILR---EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVIT 736
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
N + +Y + E A ++ G +P T+ + GY K
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 132/342 (38%), Gaps = 62/342 (18%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N FE + + P+ C+ A + Y K + + ++++ CG + +N +L ++
Sbjct: 405 NIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
NG +V + +E+K+ P+ T+N ++A + E A + + + PD
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+T+ + + + E++ L EME C+ N + Y SLL Y N K
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN-----------GK 573
Query: 210 MMSLFAKMNDAEYTCVIS-------SLV----KLGEFEKAENIYDEWESISGTGDPRVPN 258
+ L + + Y+ VI +LV K +AE + E + + D N
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633
Query: 259 ILLAAYINRNQLEMAE---------------SFYNRL--------------------VTK 283
+++ Y R + A + YN L + K
Sbjct: 634 SMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
GIKP ++ + + Y + +M F + S VPD
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDS--GIVPD 733
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
EAE ++ E GF N M+++Y + K ++L +K + +P + TYN +
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLM 671
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ D +E+ E+ I PD ISY+T+ Y + A+ EM
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIV 731
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ + Y++ + Y +E + + + M+ + N Y ++ KL ++A+
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 242 YDEWESISGTGDPRVP 257
++ ++ DP P
Sbjct: 792 VEDLRNL----DPHAP 803
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 138/267 (51%), Gaps = 3/267 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK--VPQMLQEL 106
+A++ Y +N + ++ + L++ M E G + + +N ++N + +G ++ Q+L E+
Sbjct: 253 NAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEV 312
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD++TYN ++AC+ +++ E A F +++ + PD +Y+ + S+Y +
Sbjct: 313 RRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARA 372
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA KE+E + + V Y+SLL ++ G ++V I ++M+ ++ Y +
Sbjct: 373 RKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTI 432
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G ++A IY + +S D +L+ + +++E A + + ++ G+
Sbjct: 433 IHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGV 492
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECF 312
KP T+ L Y K G+ E+ E F
Sbjct: 493 KPTLHTYSALICAYAKAGKREEAEETF 519
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 3/243 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F ++ PD T +A++ Y + ++ +AE L +++ GF + YN +L +
Sbjct: 344 FSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSR 403
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +KV + +E+ K+ D +TYN + Q + A + + ++K + +PD ++
Sbjct: 404 EGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVT 463
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L K E+AA + EM + YS+L+ Y G ++E + M
Sbjct: 464 YTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMR 523
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
K + Y+ ++ ++ E +KA +Y E T D + +++ A + N +
Sbjct: 524 RSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWD 583
Query: 272 MAE 274
+ +
Sbjct: 584 VVD 586
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 160/392 (40%), Gaps = 20/392 (5%)
Query: 29 RARENFFENLPDKMRGP----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
RAR F + D GP D+ + LL + + +++ E +++++ + G
Sbjct: 827 RARAIFNTMMRD---GPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSIL 883
Query: 85 HMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
L + G L +V ++ +K P + Y + L E E+++
Sbjct: 884 LTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEA 943
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
PD +++ LY+ +E + ++++ + + + Y++L+ +Y +E
Sbjct: 944 GFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEG 1003
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ KM SL + Y +I++ K +E+AE +++E S D ++++
Sbjct: 1004 FSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKT 1063
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRK 321
Y AE+ + GI+P +T LL Y K GQ E+ K + G V
Sbjct: 1064 YRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLD 1123
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR--TYAKAGKMPL 378
+P +I A K GD L ++ AG I+ +R T ++ +
Sbjct: 1124 TLPYSSVIDAYLKK----GDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAI 1179
Query: 379 IIVERMQKDNVQMDAETQKVLKITSEMPVSEV 410
+++ +Q + ++LK SE VSEV
Sbjct: 1180 VLLNALQDAGFDLPI---RLLKEKSESLVSEV 1208
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 21/297 (7%)
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
Y + C + A + F +++ ++ Y + S+Y +M+LPE A L E
Sbjct: 705 YESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAE 764
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF-------AKMNDAEYTCVISSL 229
KN + + +S+Y ++ L+IW+K SL +KM+ + +I +
Sbjct: 765 -----KNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAY 819
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G +E+A I++ + N LL A I +L L G+K
Sbjct: 820 AFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISK 879
Query: 290 TTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ L + + G + +V + + KA G + P + L + + E
Sbjct: 880 SSILLTLEAFAQAGNLFEVQKIYNGMKAAG----YFPTMHVYRIMLRLLCKCKRVRDVET 935
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTY--AKAGKMPLIIVERMQKDNVQMDAETQKVLKI 401
+L + AG +I NS+L+ Y + K II +++Q +++ D ET L I
Sbjct: 936 MLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLII 992
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 98/228 (42%), Gaps = 5/228 (2%)
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE--VLRIWKK 209
Y+ + +Y + K L M +R C + V++++L++ G + L++ +
Sbjct: 252 YNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNE 311
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + Y +IS+ + E+A ++ + ES D N +++ Y +
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
AE + L +KG P T+ L + + ++G EKV + ++ + R + D
Sbjct: 372 ARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVK--RGFGQDEMTY 429
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ +QG D A + ++++G + Y L+ + KA K+
Sbjct: 430 NTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKV 477
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 17/364 (4%)
Query: 26 LQTRARENFF--ENLPDKMR---------GPDTCS--ALLHSYVQNKKSAEAEALMEKMS 72
L T+ + FF N+P +R PD + AL++ + + + +A ++++M
Sbjct: 126 LCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMR 185
Query: 73 ECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKE 131
F + YN M+ S G+LD ++L Q L N P V+TY + + A + +
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A K E+ + PD +Y+T+ K + ++A ++ +E + C + ++Y+ LL
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
N G +E ++ KM S N Y+ +I++L + G+ E+A N+ + T
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D + L+AA+ +L++A F +++ G P + + K G+ ++ LE
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
F K +G V P+ ++ L GD A H+++ + + G EI YNS++
Sbjct: 426 FGK-LGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 371 AKAG 374
+ G
Sbjct: 484 CREG 487
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 140/329 (42%), Gaps = 9/329 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
+ H ++ E+ L+E M G+ + ++ + + + K ++++ L+K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV YN + N + A + ++ PD ++Y+ + + A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
L ++ C+ + Y+ L+ G DE L++ +M+S K + Y +I +
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G ++A + E D NILL A +N+ + E E ++ ++ P
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEH 347
T+ +L + G++E+ + K + + PD + + AA+ + +G +D A
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLK--LMKEKGLTPDAYSYDPLIAAFCR---EGRLDVAIE 389
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
L T+ + G + + YN++L T K GK
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGK 418
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
EA LM++M G YN ++ G +D+ +M++ L+ K PDV++YN+ L
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
A +Q E EK ++ K DP+ ++YS L + + E+A LK M+++
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ +Y L++ + G D + + M+S + Y V+++L K G+ ++A I
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ + + + + N + +A + A +++ GI P T+ + +
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 302 KGQMEKVLE 310
+G +++ E
Sbjct: 486 EGMVDEAFE 494
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKM-SECGFLKCP 80
+ + RA E NL K PD S LL + + K E E LM KM SE KC
Sbjct: 276 EGMVDRAFE-MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE----KCD 330
Query: 81 ---LPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKA 136
+ Y+ ++ +G++++ +L+ +K K +PD +Y+ +AA + + A +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ PD ++Y+T+ + K ++A ++ + C N +Y+++ S +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G K L + +MMS ++ Y +IS L + G ++A + + S
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
NI+L + +++E A + +V G +P TT+ +L G G + +E
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +L ++ G+ ++ +++ ++ + P+VVTY++ + E A
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K+ + PD SY L + + + + A L+ M C + V Y+++L+ G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D+ L I+ K+ + N + Y + S+L G+ +A ++ E S D N
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+++ ++ A + + P T+ ++ G+ K ++E + + +G+
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F E + PD + +L + +N K+ +A + K+ E G YN M +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S+G + M+ E+ N PD +TYN ++ + + A + ++++ + P +
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + + K E A L+ M CR N Y+ L+ GY+ E + + +
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 211 MSLFA 215
+ + A
Sbjct: 570 VRIDA 574
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 166/380 (43%), Gaps = 10/380 (2%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+A Q + N F LP K+R +C+ LLH ++ K A + + M G Y
Sbjct: 199 EARQCFWKMNKFRVLP-KVR---SCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTY 254
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ++ G L+ + +E+K K PD+VTYN + A F E+K
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+PD I+Y++L + + K E +A L M++R + N V YS+L+ + G E
Sbjct: 315 AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLE 374
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ + M+ + + N+ YT +I + K+G+ +A + E + + LL
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
++ AE + L+ G + L GY+K MEK ++ ++ + +
Sbjct: 435 GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM--NKKNL 492
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLI 379
PD L L Q +I+ + ++ + + G + IY +L+ Y K GK +
Sbjct: 493 KPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVN 552
Query: 380 IVERMQKDNVQMDAETQKVL 399
+++ MQ +++ T VL
Sbjct: 553 LLQEMQDLGIKITVVTYGVL 572
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 11/321 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL ++ + EAE L + + G+ Y + + YI ++K +L+E+
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KKN PD++ Y + QN+ E + E+ + + Y+TL Y K+
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKT 547
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L+EM+ + V Y L+ +G + +R + M + N YT +
Sbjct: 548 TEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTAL 607
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K E+A+N+++E + D V L+ + A S NR+V G+
Sbjct: 608 IDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGM 667
Query: 286 KPCYTTWELLTWGYLKKGQME--KVL--ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ + L WG+ + GQ++ K L E +K I +PD L K E GD
Sbjct: 668 ELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGI------IPDQVLCICLLRKYYELGD 721
Query: 342 IDGAEHLLVTLRNAGHVSTEI 362
I+ A L + G +S I
Sbjct: 722 INEALALHDDMARRGLISGTI 742
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 16/319 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
++ + N+ + G L++ Q ++ K P V + N L + + A F ++
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P +Y+ + + E A + +EM+ + R + V Y+SL+ Y +G
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLT 303
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--N 258
+ ++++M + + Y +I+ K FE+ ++ + G P V +
Sbjct: 304 GAVSVFEEMKDAGCEPDVITYNSLINCFCK---FERIPQAFEYLHGMKQRGLQPNVVTYS 360
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV--LECFKKAI 316
L+ A+ L A F+ ++ G++P T+ L K G + + LE +
Sbjct: 361 TLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA 420
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
G V TA + L E G + AE L L AG ++ +IY SL Y KA
Sbjct: 421 GVNLNIVT----YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476
Query: 376 M--PLIIVERMQKDNVQMD 392
M + I+E M K N++ D
Sbjct: 477 MEKAMDILEEMNKKNLKPD 495
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 17/364 (4%)
Query: 26 LQTRARENFF--ENLPDKMR---------GPDTCS--ALLHSYVQNKKSAEAEALMEKMS 72
L T+ + FF N+P +R PD + AL++ + + + +A ++++M
Sbjct: 122 LCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMR 181
Query: 73 ECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKE 131
F + YN M+ S G+LD ++L Q L N P V+TY + + A + +
Sbjct: 182 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVD 241
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A K E+ + PD +Y+T+ K + ++A ++ +E + C + ++Y+ LL
Sbjct: 242 EALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL 301
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
N G +E ++ KM S N Y+ +I++L + G+ E+A N+ + T
Sbjct: 302 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 361
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D + L+AA+ +L++A F +++ G P + + K G+ ++ LE
Sbjct: 362 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 421
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
F K +G V P+ ++ L GD A H+++ + + G EI YNS++
Sbjct: 422 FGK-LGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479
Query: 371 AKAG 374
+ G
Sbjct: 480 CREG 483
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
EA L+++M G YN ++ G +D+ +M++ L+ K PDV++YN+ L
Sbjct: 242 EALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL 301
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
A +Q E EK ++ K DP+ ++YS L + + E+A LK M+++
Sbjct: 302 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 361
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ +Y L++ + G D + + M+S + Y V+++L K G+ ++A I
Sbjct: 362 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 421
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ + + + + N + +A + A +V+ GI P T+ + +
Sbjct: 422 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCR 481
Query: 302 KGQMEKVLE 310
+G ++K E
Sbjct: 482 EGMVDKAFE 490
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 140/329 (42%), Gaps = 9/329 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
+ H ++ E+ L+E M G+ + ++ + + + K ++++ L+K
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV YN + N + A + ++ PD ++Y+ + + A
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
L ++ C+ + Y+ L+ G DE L++ +M+S K + Y +I +
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G ++A + E D NILL A +N+ + E E ++ ++ P
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEH 347
T+ +L + G++E+ + K + + PD + + AA+ + +G +D A
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLK--LMKEKGLTPDAYSYDPLIAAFCR---EGRLDVAIE 385
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
L T+ + G + + YN++L T K GK
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGK 414
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKM-SECGFLKCP 80
+ + RA E NL K PD S LL + + K E E LM KM SE KC
Sbjct: 272 EGMVDRAFE-MIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE----KCD 326
Query: 81 ---LPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKA 136
+ Y+ ++ +G++++ +L+ +K K +PD +Y+ +AA + + A +
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ PD ++Y+T+ + K ++A ++ + C N +Y+++ S +
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G K L + +M+S ++ Y +IS L + G +KA + + S
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVT 506
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
NI+L + +++E A + +V G +P TT+ +L G G + +E
Sbjct: 507 YNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 560
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +L ++ G+ ++ +++ ++ + P+VVTY++ + E A
Sbjct: 295 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 354
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K+ + PD SY L + + + + A L+ M C + V Y+++L+ G
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 414
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D+ L I+ K+ + N + Y + S+L G+ +A ++ E S D N
Sbjct: 415 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNS 474
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+++ ++ A + + P T+ ++ G+ K ++E ++ +G+
Sbjct: 475 MISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGN 533
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 3/185 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F E + PD + +L + +N K+ +A + K+ E G YN M +
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S+G + M+ E+ N PD +TYN ++ + + A + ++++ + P +
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + + K E A L M CR N Y+ L+ GY+ E + + +
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Query: 211 MSLFA 215
+ + A
Sbjct: 566 VRINA 570
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++LY +G KDEV R+W +L + N Y C+ISSL+KL + + AE I EWES
Sbjct: 1 MTLYAAIGNKDEVYRVWNLYTNLQKRFNSG-YLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ D ++PN+++ +Y + ++ AE++ +RL+ G +P W+ L GY G K E
Sbjct: 60 SFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAE 119
Query: 311 CFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
KKAI S +W P++ ++ A L+ G+++ AE ++ L
Sbjct: 120 TLKKAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEIIGLL 162
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 144/329 (43%), Gaps = 4/329 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
+C+ LLH + + K+ + + M G YN M++ G ++ + +E+
Sbjct: 100 SCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEM 159
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD VTYN + + F E+K +PD I+Y+TL + + K
Sbjct: 160 KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKL 219
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
K +EM++ + N V+YS+L+ + + L+ + M L N+ YT +
Sbjct: 220 PKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSL 279
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ + K+G A + DE + + L+ + +++ AE + ++VT G+
Sbjct: 280 VDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P ++ L G++K M++ LE + G R PD L L I+ A
Sbjct: 340 IPNLASYTALIHGFVKAKNMDRALELLDEMKG--RGIKPDLLLYGTFIWSLCGLEKIEAA 397
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
+ ++ ++ G +T IY +L+ Y K+
Sbjct: 398 KVVMNEMQEKGIKANTFIYTTLMDAYFKS 426
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 116/265 (43%), Gaps = 2/265 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ +Y + ++A L ++MS+ G + Y +++ ++ + ++ ++
Sbjct: 275 TYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKM 334
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P++ +Y + + + A + E+K I PD + Y T +E
Sbjct: 335 VTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKI 394
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + EM+++ + N Y++L+ Y E L + ++M+ L ++ + +
Sbjct: 395 EAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVL 454
Query: 226 ISSLVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I L K KA + + + G + + ++ +Q+E A + + ++ KG
Sbjct: 455 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKG 514
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVL 309
+ P T + L G LK+G + + L
Sbjct: 515 LVPDRTAYTSLIDGKLKQGNVVQAL 539
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 81/423 (19%), Positives = 165/423 (39%), Gaps = 50/423 (11%)
Query: 30 ARENFFENLPDKMRG--PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
A FE + K RG PDT + +++ Y + + + E+M + YN
Sbjct: 151 AASGLFEEM--KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNT 208
Query: 86 MLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++N + G+L K + +E+K++ P+VV+Y+ + A ++ + A K ++++++
Sbjct: 209 LINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG 268
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEK---------------RTCRKNRV---- 185
+ P+ +Y++L Y K+ A EM + C R+
Sbjct: 269 LVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAE 328
Query: 186 ----------------AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+Y++L+ + D L + +M K + Y I SL
Sbjct: 329 ELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSL 388
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
L + E A+ + +E + + + L+ AY ++ I+
Sbjct: 389 CGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTA 448
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ +L G K + K ++ F + I + + + TA + L ++ ++ A L
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGR-ISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLF 507
Query: 350 VTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAE----TQKVLKIT 402
+ G V Y SL+ K G + L + ++M + V+ A Q +K++
Sbjct: 508 EQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGDLCQNTIKLS 567
Query: 403 SEM 405
M
Sbjct: 568 LRM 570
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 11/161 (6%)
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ + S L++ FE+A + + + R N LL + + + + F+ ++
Sbjct: 66 FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK-LEEQG 340
G KP T+ ++ K+G +E F++ R +PD T YN ++ G
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEM--KFRGLIPD----TVTYNSMIDGYG 179
Query: 341 DIDGAEHLLVTLRNAGHVSTE----IYNSLLRTYAKAGKMP 377
+ + + +S E YN+L+ + K GK+P
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLP 220
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 172/384 (44%), Gaps = 20/384 (5%)
Query: 24 QALQTRARENFFENLPDK--MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+ L + RE F+ +P R +A++++Y +N + + L+ M + L
Sbjct: 149 EGLLDKCRE-VFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSIL 207
Query: 82 PYNHMLNLYISNGQLD--KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
YN ++N + G LD + + E++ + PDV+TYN L ACA + + AE F
Sbjct: 208 TYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFR 266
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+ ++ I PD +YS L + K+ EK + L+EME + +Y+ LL Y +G
Sbjct: 267 TMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELG 326
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
E + ++++M + N A Y+ +++ K G ++ +I+ E + + D N
Sbjct: 327 SIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYN 386
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK----VLECFKK 314
IL+ + + + ++ +V + ++P T+E L + K G E +L +K
Sbjct: 387 ILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEK 446
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKA 373
I VP + T + + A + T+ G T E YNS + +A+
Sbjct: 447 GI------VPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARG 500
Query: 374 G--KMPLIIVERMQKDNVQMDAET 395
G K I+ RM + ++ D +
Sbjct: 501 GLYKEAEAILSRMNESGLKRDVHS 524
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 131/319 (41%), Gaps = 6/319 (1%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
NLPD + + LL +Y + EA + +M G + Y+ +LNLY +G+
Sbjct: 308 NLPDIT----SYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRY 363
Query: 97 DKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
D V + E+K NT PD TYN+ + + F ++ + ++P+ +Y L
Sbjct: 364 DDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGL 423
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
K L E A L M ++ + AY+ ++ + +E L ++ M + +
Sbjct: 424 IFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGS 483
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
Y I + + G +++AE I D N ++ A+ Q E A
Sbjct: 484 NPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVK 543
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRLITAAYN 334
Y + +P T E++ Y G +++ E F++ S + V + L+ A Y
Sbjct: 544 SYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYA 603
Query: 335 KLEEQGDIDGAEHLLVTLR 353
K + D ++T+R
Sbjct: 604 KNDRLNDAYNLIDEMITMR 622
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 159/364 (43%), Gaps = 36/364 (9%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+Y + K A + E+M+E G + YN ML++Y G+ DK+ ++L E++
Sbjct: 226 TTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMR 285
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ D T + L+AC + + A + F LK P ++Y+ L ++ K +
Sbjct: 286 SRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFS 345
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + L EME+ C + V Y+ +++ Y G+ +E + M S N YT +I
Sbjct: 346 EALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTII 405
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
++ ++G+ +KA ++D+ + + N +L ++ E + G
Sbjct: 406 NAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCS 465
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKA---------------------IGSVRKWVPD 325
P + TW + KKG + V + F++ GS
Sbjct: 466 PNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKM 525
Query: 326 H-RLITAAY-----------NKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
H +I A + N L +GD AE +++ +RN G +E Y+ ++ +YAK
Sbjct: 526 HEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAK 585
Query: 373 AGKM 376
G +
Sbjct: 586 GGNV 589
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 160/359 (44%), Gaps = 19/359 (5%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP- 80
+ L ARE FF L + P T + ALLH + + +EA +++ +M E CP
Sbjct: 306 EGLIDEARE-FFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEEN---NCPP 361
Query: 81 --LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ YN ++ Y+ G ++ ++ + K P+ VTY + A D + A + F
Sbjct: 362 DAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMF 421
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++ + P+ +Y+ + + K L E+ L M+ C N + ++++L++
Sbjct: 422 DQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKK 481
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G V +++++M + + + + +IS+ + G A +++E +
Sbjct: 482 GMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTY 541
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
N LL A R + AES + KG +P T++ L+ Y K G + K +E +K+I
Sbjct: 542 NALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNV-KGIEMIEKSIY 600
Query: 317 -GSV-RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY-NSLLRTYAK 372
G + W+ L+ A + + + G E L+ G+ + NS+L +AK
Sbjct: 601 DGDIFPSWMLLRTLVLANF----KCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAK 655
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/271 (18%), Positives = 109/271 (40%), Gaps = 5/271 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD+ DT + L+ +Y + + +A + E+M + GF C YN +LN G
Sbjct: 501 PDR----DTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKA 556
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ +++ K P +Y+L + + A + + E + I P W+ TL
Sbjct: 557 AESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVL 616
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K + ++K + + V +S+LS++ D + + + +
Sbjct: 617 ANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQP 676
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ + ++ + G+ KAE + ++ G D N ++ + + ++
Sbjct: 677 DLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRIL 736
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
+ + + G+ PC T+ GY +G ++
Sbjct: 737 SEMTSIGVGPCIFTYNTFISGYAAQGMFTEI 767
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 96 LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
+++ Q LQ K PD+V N L+ A N + A + + + PD +++++L
Sbjct: 627 MERAFQALQ--KHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSL 684
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+Y + KA L+ ++ + + V+Y++++ + G E +RI +M S+
Sbjct: 685 MDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGV 744
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENI 241
Y IS G F + ++
Sbjct: 745 GPCIFTYNTFISGYAAQGMFTEINDV 770
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 48/209 (22%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y+T+ Y + +A + M + + V Y+ +L +Y MG R W
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMG------RSW 274
Query: 208 KKMMSLFAKMND-----AEYTC-------------------------------------V 225
K++ L +M E+TC +
Sbjct: 275 DKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNAL 334
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ K G F +A ++ E E + D N ++AAY+ E + + +KGI
Sbjct: 335 LHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGI 394
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
P T+ + Y + G ++K LE F +
Sbjct: 395 MPNAVTYTTIINAYGRVGDIDKALEMFDQ 423
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 5/286 (1%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A E +F +P R + T ALL+ Y K +A + +M E G N+++
Sbjct: 134 AAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLM 193
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
LY+ GQ KV + E+K +N PD +T + + + A+ N +T ++ F + +
Sbjct: 194 GLYLELGQHSKVANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETFYNMSLLDVP 253
Query: 147 PDWISYSTLTSLYIKMELPEKAATT-LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
W + TL S+Y+ + E+A ++ E R + L+ + ++G V R
Sbjct: 254 KQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNR 313
Query: 206 IWKKM-MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+WK + M+ + Y ++ L KLG+ ++ + IY EWE DPR+ N+L A+
Sbjct: 314 VWKDIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAH 373
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ AE + ++ +G + T EL YL KG L+
Sbjct: 374 LRNGMTNEAELLWEKVKERGGDFDFETCELFREHYLGKGDTTSALK 419
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 20/383 (5%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
F LP + RG D LL Y + +AE M+++ G +K PY+ ML+ Y
Sbjct: 122 LFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQELRGIG-IKSLQPYHLMLSFYKLR 180
Query: 94 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACAS-QNDKETAEKAFLELKKTKIDPDWIS 151
G + +M+ E+K + D Y + LAA S D E E++ + D +
Sbjct: 181 GMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVEDVLAEMEGRGLKLDAVG 240
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS-----LLSLYTNMGYKDEVLRI 206
+ +Y++ L K+ L+ +EK + + YS+ +L+++ +G +D V RI
Sbjct: 241 CLAVAGIYLRSGLRHKSERVLQRLEK-SLKSGEFKYSNSIRRRMLAMFGKLGDRDAVDRI 299
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W + A ++ I + ++G+ ++AE++Y + +PR+ N LA +
Sbjct: 300 WHS-IERSASTTVEDFIFGIEAFGRVGKMDEAEDMY--MRVGCNSCNPRLHNAFLAVLVE 356
Query: 267 RNQLEMAESFYNRLVTKGIKPCYT--TWELLTWGYLKKGQMEK---VLECFKKAIGSVRK 321
+ + A + R+ KG++ + T+ LL YLK G + + E + A G +
Sbjct: 357 QGDVIRAVALVERM--KGVRCLLSTVTYHLLIKVYLKAGDVSRATLAFESLRSAFGKLEW 414
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLII 380
P + GD+ +E L+ G +S +++SL+R YAK G
Sbjct: 415 PRPSSETLAVMLEFFVGTGDVQASERLVKKWMEDGFPLSAAVFHSLVRVYAKGGAGVDNF 474
Query: 381 VERMQKDNVQMDAETQKVLKITS 403
RM V+ ET+++L+ S
Sbjct: 475 PGRMLSAGVEPTRETEQLLRQIS 497
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 7/353 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+ +YV + ++A +++ M E L +N + +LY + + D +P +L+E++
Sbjct: 114 MFENYVIHSLLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMR 173
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKA 168
SP+V TYN+ + A + D E E+ F ++K P+ TL S Y+ EKA
Sbjct: 174 ISPNVETYNILIGIKAKKGDTEGMERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKA 233
Query: 169 ATTLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
LKE + +++R + +++LY MG D + RIW+ F ++ Y I+
Sbjct: 234 MAYLKEAVASEEFQESRRVHDKVIALYAAMGRADMIDRIWR-FTRRFPVVSANSYVATIA 292
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ K+G ++AE ++ E P L AY ++ AE R+
Sbjct: 293 AYEKVGRIDRAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHI 352
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ L GY+K G + E + + P + + + D+ AE
Sbjct: 353 NNLSYHHLVAGYMKSGNPKMAAETLNRMFEE--RVPPCFDTVMLILKEHAKNADVSSAEL 410
Query: 348 LLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L +R + + YNSLL Y AGK ++RM D V +A T ++L
Sbjct: 411 LFQDMRRESYNKNVAAYNSLLEAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 162/375 (43%), Gaps = 15/375 (4%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ Q L E++ +P +G LL +YV +AE + KM + F
Sbjct: 218 IAKVQGLPKA--ESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPMT 275
Query: 80 PLPYNHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
P ++ ML LY I +L + +++ K+N P TY + + A ND E+
Sbjct: 276 PFAHDQMLILYKRIDKRKLADILSLME--KENVKPSPFTYKILIDAKGLCNDISGMEQVV 333
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+K I PD + S L Y+ L +KA LK+ME+ + +R+ LL LY +
Sbjct: 334 DSMKAEGIKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGAL 393
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+DEV R+WK A + E I + KL ++AE I+D + R
Sbjct: 394 QMEDEVRRLWKICE---ANPHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHY 450
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N ++ Y L + N++ G + TW+ + Y++ G++EK KA+
Sbjct: 451 NTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVKAVQ 510
Query: 318 --SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAG 374
++ ++ + Y + +GD+ AE + + +G V + +LL+ Y +
Sbjct: 511 KYGMKPLFTSYKTLMDHYAR---RGDVHNAEKIFDKMIQSGFVPRLGQFGTLLQAYVNSK 567
Query: 375 KMPLIIVERMQKDNV 389
+ +RM N+
Sbjct: 568 TPAYGMKDRMMAYNI 582
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 181/376 (48%), Gaps = 24/376 (6%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEA----EALMEKMSECGFLKCP--LPYN 84
++FE + PDT + ++H ++ K+ +A ++ EK SEC P + +
Sbjct: 61 SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECR----PDVVTFT 116
Query: 85 HMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+++LY GQ++ + L + P++V+YN ++A AS + A F E+K++
Sbjct: 117 SIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRS 176
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
PD +SY++L S + + + P +A M++ C+ N V+Y++L+ Y + GY +
Sbjct: 177 GFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQA 236
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ I ++M N ++++ + G+ +++ E + N + +
Sbjct: 237 VDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGS 296
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y+N + E A + Y + K KP T+ +L G + + E+ L CF K + +R +
Sbjct: 297 YMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEAL-CFFKEMLDLRIPL 355
Query: 324 PD--HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM---P 377
+ + AY+K QG + AE L +L+ +G + Y +++ Y+ A +M
Sbjct: 356 SSEIYSSMICAYSK---QGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYS-ASEMWEKV 411
Query: 378 LIIVERMQKDNVQMDA 393
+ + M+ +N+Q+D+
Sbjct: 412 CALYQEMEANNIQLDS 427
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 6/297 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N+++N S G + ++ +++ N PD+VT+N+ L+A S A F +K
Sbjct: 8 FNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK 67
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRT-CRKNRVAYSSLLSLYTNMGY 199
T I PD + + + IK++ +A M EKR+ CR + V ++S++ LY+ G
Sbjct: 68 GTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQ 127
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
++ ++ M++ K N Y +IS+ G ++A +++DE + D
Sbjct: 128 IEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTS 187
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGS 318
L++ + Q A ++ + KP ++ L Y G + + ++ ++
Sbjct: 188 LISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDG 247
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
+ V + AA + ++ +ID L H++T NS + +Y G+
Sbjct: 248 IHPNVVSICTLLAACGRFGQKVNIDSV--LSAAELRGIHLNTIACNSAIGSYMNIGE 302
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 105/278 (37%), Gaps = 44/278 (15%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKE----------- 131
N + Y++ G+ +K + + ++ K T PD VT+ + ++ C + E
Sbjct: 291 NSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLD 350
Query: 132 ------------------------TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
AE F LK + PD ++Y+ + + Y E+ EK
Sbjct: 351 LRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEK 410
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+EME + + +A S+L+ + VL + + M NDA + ++S
Sbjct: 411 VCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLS 470
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ L ++ KA ++ + E N LL + E+ + R V G
Sbjct: 471 ACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSV 530
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
T+ +L L G+ K +E V +W+ D
Sbjct: 531 NINTYSILLKNLLSAGKWRKYIE--------VLQWMND 560
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 156/333 (46%), Gaps = 13/333 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ +Y N + EA + +K+ E G + YN +LN+Y G K+ ++ +K
Sbjct: 224 TSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMK 283
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ +PD+ TYN +++C + E A + F E+K PD ++Y+ L +Y K P
Sbjct: 284 SSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPR 343
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LKEME + V Y+SL+S Y G DE + + +M+ K + YT ++
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR-NQLEMAESFYNRLVTKGI 285
S K G+ + A +++E + N L+ + NR N +EM + F + + +
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV 463
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P TW L + + G +V FK K G +VP+ + G D
Sbjct: 464 -PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG----FVPERDTFNTLISAYSRCGFFD 518
Query: 344 GAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
A + + +AG V+ ++ YN++L A+ G
Sbjct: 519 QAMAIYRRMLDAG-VTPDLSTYNAVLAALARGG 550
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 167/373 (44%), Gaps = 47/373 (12%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T +ALL Y ++++ EA ++++M GF + YN +++ Y +G LD+
Sbjct: 324 PDKV----TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDE 379
Query: 99 VPQM-LQELKKNTSPDVVTYNLWL---------------------AAC------------ 124
++ Q +KK PDV TY L A C
Sbjct: 380 AMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Query: 125 --ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
++ + K F E+K + PD ++++TL +++ + + + + KEM++
Sbjct: 440 MHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 499
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
R +++L+S Y+ G+ D+ + I+++M+ + + Y V+++L + G +E++E +
Sbjct: 500 ERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVL 559
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E + + LL AY N ++E + + + I+P + L Y K
Sbjct: 560 AEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKS 619
Query: 303 GQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-S 359
+ + ++A +R+ + PD + A + + + +L ++++G S
Sbjct: 620 DLLTET----ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPS 675
Query: 360 TEIYNSLLRTYAK 372
YNSL+ Y++
Sbjct: 676 LTTYNSLMYMYSR 688
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 37 NLPDKMR----GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
L D M+ PD T + L+ S + EA + E+M GF + YN +L++Y
Sbjct: 277 GLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVY 336
Query: 91 ISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ + + ++L+E++ + +P +VTYN ++A A + A + ++ K I PD
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDV 396
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S + K + A +EM C+ N +++L+ ++ N G E+++++++
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEE 456
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + +++ + G + ++ E + + N L++AY
Sbjct: 457 IKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF 516
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVL 309
+ A + Y R++ G+ P +T+ + + G Q EKVL
Sbjct: 517 FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVL 559
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L ++ PD T +A++ Y + + ++ ++ + + GF YN ++ +
Sbjct: 626 ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYM 685
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y +K +L+E+ K PD++++N + A + A + F E+K + PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I+Y+T + Y + +A +K M K C+ N+ Y+SL+ + + +DE
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDE 799
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 139/354 (39%), Gaps = 44/354 (12%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL + QN +E + ++M GF+ +N +++ Y G D+ +
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ L +PD+ TYN LAA A E +EK E+K + P+ ++Y +L Y
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW-------------- 207
+ E+ + +E+ V +L+ +Y+ E R +
Sbjct: 584 GKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643
Query: 208 -KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
M+S++ + T I + +K F + Y N L+ Y
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTY---------------NSLMYMYSR 688
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVP 324
E +E ++ KG+KP ++ + + Y + G+M++ F K G P
Sbjct: 689 TEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFG----LAP 744
Query: 325 D---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
D + A+Y + I+ + + ++N + YNSL+ + K +
Sbjct: 745 DVITYNTFIASY--ASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNR 796
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 18/247 (7%)
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+L+ + D +Y++L + Y +A K++E+ CR + Y+ +L++Y MG
Sbjct: 210 DLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG 269
Query: 199 YKDEVLRIWKKMMSLFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEWESISGT 251
W K+ L M + Y +ISS + +E+A +++E ++ +
Sbjct: 270 MP------WSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFS 323
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D N LL Y + A + G P T+ L Y + G +++ +E
Sbjct: 324 PDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMEL 383
Query: 312 FKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 369
+ V+K + PD T + E+ G D A + +R AG + +N+L++
Sbjct: 384 KSQM---VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKM 440
Query: 370 YAKAGKM 376
+ G
Sbjct: 441 HGNRGNF 447
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 5/207 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L+ Y ++ E E ++ E GF N M+++Y + K ++L +K +
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671
Query: 111 -SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+P + TYN + + E +E E+ + PD IS++T+ Y + ++A+
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM+ + + Y++ ++ Y + E + + K M+ K N Y +I
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWF 791
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRV 256
KL ++A + ++ DP V
Sbjct: 792 CKLNRRDEASSFISNLRNL----DPSV 814
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 9/331 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ +Y N + EA + +K+ E G + YN +LN+Y G K+ ++ +K
Sbjct: 224 TSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMK 283
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ +PD+ TYN +++C + E A + F E+K PD ++Y+ L +Y K P
Sbjct: 284 SSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPR 343
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LKEME + V Y+SL+S Y G DE + + +M+ K + YT ++
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR-NQLEMAESFYNRLVTKGI 285
S K G+ + A +++E + N L+ + NR N +EM + F + + +
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV 463
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P TW L + + G +V FK+ + +VP+ + G D A
Sbjct: 464 -PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA--GFVPERDTFNTLISAYSRCGFFDQA 520
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
+ + +AG V+ ++ YN++L A+ G
Sbjct: 521 MAIYRRMLDAG-VTPDLSTYNAVLAALARGG 550
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 167/373 (44%), Gaps = 47/373 (12%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T +ALL Y ++++ EA ++++M GF + YN +++ Y +G LD+
Sbjct: 324 PDKV----TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDE 379
Query: 99 VPQM-LQELKKNTSPDVVTYNLWL---------------------AAC------------ 124
++ Q +KK PDV TY L A C
Sbjct: 380 AMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Query: 125 --ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
++ + K F E+K + PD ++++TL +++ + + + + KEM++
Sbjct: 440 MHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 499
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
R +++L+S Y+ G+ D+ + I+++M+ + + Y V+++L + G +E++E +
Sbjct: 500 ERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVL 559
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E + + LL AY N ++E + + + I+P + L Y K
Sbjct: 560 AEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKS 619
Query: 303 GQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-S 359
+ + ++A +R+ + PD + A + + + +L ++++G S
Sbjct: 620 DLLTET----ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPS 675
Query: 360 TEIYNSLLRTYAK 372
YNSL+ Y++
Sbjct: 676 LTTYNSLMYMYSR 688
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 37 NLPDKMR----GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
L D M+ PD T + L+ S + EA + E+M GF + YN +L++Y
Sbjct: 277 GLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVY 336
Query: 91 ISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ + + ++L+E++ + +P +VTYN ++A A + A + ++ K I PD
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDV 396
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL S + K + A +EM C+ N +++L+ ++ N G E+++++++
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEE 456
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + +++ + G + ++ E + + N L++AY
Sbjct: 457 IKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF 516
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVL 309
+ A + Y R++ G+ P +T+ + + G Q EKVL
Sbjct: 517 FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVL 559
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L ++ PD T +A++ Y + + ++ ++ + + GF YN ++ +
Sbjct: 626 ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYM 685
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y +K +L+E+ K PD++++N + A + A + F E+K + PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I+Y+T + Y + +A +K M K C+ N+ Y+SL+ + + +DE
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDE 799
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 114/286 (39%), Gaps = 33/286 (11%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL + QN +E + ++M GF+ +N +++ Y G D+ +
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ L +PD+ TYN LAA A E +EK E+K + P+ ++Y +L Y
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW-------------- 207
+ E+ + +E+ V +L+ +Y+ E R +
Sbjct: 584 GKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643
Query: 208 -KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
M+S++ + T I + +K F + Y N L+ Y
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTY---------------NSLMYMYSR 688
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
E +E ++ KG+KP ++ + + Y + G+M++ F
Sbjct: 689 TEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIF 734
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 18/247 (7%)
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+L+ + D +Y++L + Y +A K++E+ CR + Y+ +L++Y MG
Sbjct: 210 DLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG 269
Query: 199 YKDEVLRIWKKMMSLFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEWESISGT 251
W K+ L M + Y +ISS + +E+A +++E ++ +
Sbjct: 270 MP------WSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFS 323
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D N LL Y + A + G P T+ L Y + G +++ +E
Sbjct: 324 PDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMEL 383
Query: 312 FKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 369
+ V+K + PD T + E+ G D A + +R AG + +N+L++
Sbjct: 384 KSQM---VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKM 440
Query: 370 YAKAGKM 376
+ G
Sbjct: 441 HGNRGNF 447
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 112/257 (43%), Gaps = 4/257 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + ++E ++ +M + L Y +L+ Y + +++++ +
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+ P V + + + E+AFLEL++ PD + + + S+Y +
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ K L ++ + Y+SL+ +Y+ + ++ I +++++ K +
Sbjct: 654 RRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIIS 713
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ VI + + G ++A I+ E + D N +A+Y + + A ++
Sbjct: 714 FNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 282 TKGIKPCYTTW-ELLTW 297
KP T+ L+ W
Sbjct: 774 KNECKPNQNTYNSLIDW 790
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 5/207 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L+ Y ++ E E ++ E GF N M+++Y + K ++L +K +
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671
Query: 111 -SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+P + TYN + + E +E E+ + PD IS++T+ Y + ++A+
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM+ + + Y++ ++ Y + E + + K M+ K N Y +I
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWF 791
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRV 256
KL ++A + ++ DP V
Sbjct: 792 CKLNRRDEANSFISNLRNL----DPSV 814
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ + G +DKV ++++E +++ PD+ ++N +AA A E + F +K
Sbjct: 101 YNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMK 160
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD ++Y+TL ++ + + ++A +EM C+ + YS L+S+Y G
Sbjct: 161 AAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVA 220
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L I+ ++ + N YT +IS+ + G E++ + + E+ D + N ++
Sbjct: 221 DALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMI 280
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
AY + A + +RL +G+ P ++ ++ G+L G +E+ L + G+
Sbjct: 281 DAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVEEALAAYASMSGA 337
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 98/252 (38%), Gaps = 33/252 (13%)
Query: 96 LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++ ++ Q +K + YN +AA + A + ++ IDPD ++Y L
Sbjct: 12 IEDAEELFQWIKLQDWDKLRPYNAMIAAYYQAKRPKDAWDVYHQMLAEGIDPDEVTYDIL 71
Query: 156 TSLYIKMELP---------------------------------EKAATTLKEMEKRTCRK 182
S K P +K ++EM ++ R
Sbjct: 72 VSGSGKNGYPIDRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRP 131
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ ++++L++ Y + L+++ M + + YT +I + ++A ++
Sbjct: 132 DLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMF 191
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+E D V ++L++ Y + A ++RL +G +P T+ L +L K
Sbjct: 192 EEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHK 251
Query: 303 GQMEKVLECFKK 314
G +E+ + F +
Sbjct: 252 GLLEESRKHFSQ 263
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 181/376 (48%), Gaps = 24/376 (6%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEA----EALMEKMSECGFLKCP--LPYN 84
++FE + PDT + ++H ++ K+ +A ++ EK SEC P + +
Sbjct: 156 SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECR----PDVVTFT 211
Query: 85 HMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+++LY GQ++ + L + P++V+YN ++A AS + A F E+K++
Sbjct: 212 SIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRS 271
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
PD +SY++L S + + + P +A M++ C+ N V+Y++L+ Y + GY +
Sbjct: 272 GFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQA 331
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ I ++M N ++++ + G+ +++ E + N + +
Sbjct: 332 VDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGS 391
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y+N + E A + Y + K KP T+ +L G + + E+ L CF K + +R +
Sbjct: 392 YMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEAL-CFFKEMLDLRIPL 450
Query: 324 PD--HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM---P 377
+ + AY+K QG + AE L +L+ +G + Y +++ Y+ A +M
Sbjct: 451 SSEIYSSMICAYSK---QGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYS-ASEMWEKV 506
Query: 378 LIIVERMQKDNVQMDA 393
+ + M+ +N+Q+D+
Sbjct: 507 CALYQEMEANNIQLDS 522
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 165/379 (43%), Gaps = 16/379 (4%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKK 60
R + +R + R+ QA+ L FFE + + PD T +AL++++ + +
Sbjct: 29 RNDIYNMMIRLHARHNRIDQARGL-------FFEMQKWRCK-PDVETYNALINAHGRAGQ 80
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNL 119
A +ME M +N+++N S G + ++ +++ N PD+VT+N+
Sbjct: 81 WRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNI 140
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKR 178
L+A S A F +K T I PD + + + IK++ +A M EKR
Sbjct: 141 VLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKR 200
Query: 179 T-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
+ CR + V ++S++ LY+ G ++ ++ M++ K N Y +IS+ G ++
Sbjct: 201 SECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKE 260
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
A +++DE + D L++ + Q A ++ + KP ++ L
Sbjct: 261 AFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMD 320
Query: 298 GYLKKGQMEKVLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
Y G + + ++ ++ + V + AA + ++ +ID L
Sbjct: 321 AYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSV--LSAAELRGI 378
Query: 357 HVSTEIYNSLLRTYAKAGK 375
H++T NS + +Y G+
Sbjct: 379 HLNTIACNSAIGSYMNIGE 397
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 105/278 (37%), Gaps = 44/278 (15%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKE----------- 131
N + Y++ G+ +K + + ++ K T PD VT+ + ++ C + E
Sbjct: 386 NSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLD 445
Query: 132 ------------------------TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
AE F LK + PD ++Y+ + + Y E+ EK
Sbjct: 446 LRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEK 505
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+EME + + +A S+L+ + VL + + M NDA + ++S
Sbjct: 506 VCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLS 565
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ L ++ KA ++ + E N LL + E+ + R V G
Sbjct: 566 ACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSV 625
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
T+ +L L G+ K +E V +W+ D
Sbjct: 626 NINTYSILLKNLLSAGKWRKYIE--------VLQWMND 655
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 174/384 (45%), Gaps = 20/384 (5%)
Query: 24 QALQTRARENFFENLPDK--MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+ L + RE F+ +P +R + +A++++Y +N + + L+ M + L
Sbjct: 147 EGLLDKCRE-VFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSIL 205
Query: 82 PYNHMLNLYISNGQLD--KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
YN ++N + G LD + + E++ + PDV+TYN L ACA + + AE F
Sbjct: 206 TYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFR 264
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+ ++ I PD +YS L + K+ EK + L+EME + +Y+ LL Y +G
Sbjct: 265 TMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELG 324
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
E + ++++M + N A Y+ +++ K G ++ +++ E + + D N
Sbjct: 325 SIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYN 384
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK----VLECFKK 314
IL+ + + + ++ + + ++P T+E L + K G E +L +K
Sbjct: 385 ILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEK 444
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKA 373
+ VP + T + + A + T+ G T E YNSL+ +A+
Sbjct: 445 GV------VPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARG 498
Query: 374 G--KMPLIIVERMQKDNVQMDAET 395
G K I+ RM + ++ D +
Sbjct: 499 GLYKEAEAILSRMNESGLKRDVHS 522
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 109/292 (37%), Gaps = 43/292 (14%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
NLPD + + LL +Y + EA + +M G + Y+ +LNLY +G+
Sbjct: 306 NLPDIT----SYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRY 361
Query: 97 DKVPQMLQELK------------------------------------KNTSPDVVTYNLW 120
D V + E+K +N P++ TY
Sbjct: 362 DDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGL 421
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ AC E A+K L + + + P +Y+ + + + L E+A M +
Sbjct: 422 IFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGS 481
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
Y+SL+ + G E I +M K + + VI + + G++E+A
Sbjct: 482 NPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVK 541
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP---CY 289
Y E E + + +L+ Y + ++ E + + GI P CY
Sbjct: 542 SYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCY 593
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 147/374 (39%), Gaps = 47/374 (12%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL + EAE + M+E G + Y++++ + +L+KV ++
Sbjct: 238 PDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSEL 297
Query: 103 LQELKKNTS-PDVVTYNLWL---------------------AACAS-------------- 126
L+E++ + PD+ +YN+ L A C +
Sbjct: 298 LREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGK 357
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ FLE+K + DPD +Y+ L ++ + ++ T +M + N
Sbjct: 358 HGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQT 417
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y L+ G ++ +I M + YT VI + + +E+A +++
Sbjct: 418 YEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMN 477
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ N L+ A+ + AE+ +R+ G+K ++ + + + GQ E
Sbjct: 478 EVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYE 537
Query: 307 KVLECF---KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEI 362
+ ++ + +KA P+ + A + G +D E ++ +G + S
Sbjct: 538 EAVKSYVEMEKA-----NCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMC 592
Query: 363 YNSLLRTYAKAGKM 376
Y +L YAK ++
Sbjct: 593 YCMMLALYAKNDRL 606
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 12/256 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ ++ Q EA + M+E G YN +++ + G + +L + +
Sbjct: 454 TGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNE 513
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ DV ++N + A E A K+++E++K +P+ ++ + S+Y L ++
Sbjct: 514 SGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDE 573
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+E++ + + Y +L+LY K++ L ++ M ++ VI
Sbjct: 574 GEEQFQEIKASGILPSVMCYCMMLALYA----KNDRLNDAYNLIDAMITMRVSDIHQVIG 629
Query: 228 SLVKLGEFEKAEN------IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++K G+F+ N ++D+ S R N LL A Q E A N
Sbjct: 630 QMIK-GDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWCMFQRERAARVLNEAS 688
Query: 282 TKGIKPCYTTWELLTW 297
+G+ P L W
Sbjct: 689 KRGLFPELFRKSKLVW 704
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 155/345 (44%), Gaps = 6/345 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+E + D PD C + L+H + K EA+ L ++ + G + +N ++N Y
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G LD+ ++ + + +N PDV TY++ + + + A K FLE+ + P+ +
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++TL + + + ++M ++ + + + Y++L++ +G E ++ +M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
K + YT +I K G+ E A I E D L++ + Q+
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
AE ++ GIKP T+ ++ G+ KKG ++ + K+ VP
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM--QCDGHVPGVVTYN 509
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
N L +QG + A LL + N G V +I YN LL + K G
Sbjct: 510 VLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 13/270 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L++ + + +A L +M + G + + + ++N + G+ D ++
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q+ L+K PDV+TYN + D A+K +E+ + + PD +Y+ L K
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E A KEM K + VA+++L+S + G E R ++M+ K +DA
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-----NILLAAYINRNQLEMAESF 276
YT VI K G+ + + E + D VP N+LL + Q++ A
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQC-----DGHVPGVVTYNVLLNGLCKQGQMKNANML 527
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ ++ G+ P T+ +L G+ K G E
Sbjct: 528 LDAMLNLGVVPDDITYNILLEGHCKHGNRE 557
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 148/334 (44%), Gaps = 8/334 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
+C L ++ ++ A A E++ +CG+ +N +++ ++++ + E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251
Query: 107 -KKNTSPDVVTYNLWLAA-CASQN-DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
K+ P VV++N + C S N D+ K F+ + ++ PD +YS L + K
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM--MENRVFPDVFTYSVLINGLCKEG 309
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ A EM R N V +++L++ + G D + I+++M+ K + Y
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I+ L K+G+ +A+ + E D +L+ LE A +V +
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GI+ + L G+ ++GQ+ + ++ + + K PD T + ++GD+
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIK--PDDATYTMVIHGFCKKGDVK 487
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
LL ++ GHV + YN LL K G+M
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK--KMMSLFAKMNDAEYTCVISSLVKL 232
+E R ++ + +S L++ YT+ GY + ++ ++ + +L + Y + L+KL
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY--LFDRLMKL 203
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
A Y+E D N+L+ +++ A+ + + +G++P ++
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF 263
Query: 293 ELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L GY K G +++ K+ + R + PD + N L ++G +D A L + +
Sbjct: 264 NTLINGYCKSGNLDQGFR-LKRFMMENRVF-PDVFTYSVLINGLCKEGQLDDANKLFLEM 321
Query: 353 RNAGHVSTEI-YNSLLRTYAKAGK--MPLIIVERMQKDNVQMDAETQKVL 399
+ G V ++ + +L+ + G+ + + I ++M + V+ D T L
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 144/303 (47%), Gaps = 11/303 (3%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E F P +A++ Y + + + + L++ M E G + +N ++N
Sbjct: 239 AVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINA 298
Query: 90 YISNGQL--DKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ G + + ++L E++++ PD +TYN ++AC+ ++ E A K F +++
Sbjct: 299 RLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQ 358
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD +Y+ + S+Y + L KA ++E R + V+Y+SLL + G ++V I
Sbjct: 359 PDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEI 418
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W++M+ + ++ Y +I K G+ E A +Y + +S D +L+ +
Sbjct: 419 WEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGK 478
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGSVRKWV 323
N++ A + ++ G+KP T+ L GY K G + E+ +C ++ +R
Sbjct: 479 TNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRS--GIR--- 533
Query: 324 PDH 326
PDH
Sbjct: 534 PDH 536
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 3/233 (1%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F +L + PD S +LL+++ + + + + E+M + GF K + YN M+++
Sbjct: 381 EQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHM 440
Query: 90 YISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y GQ + Q+ ++++ + +PD VTY + + + N A E+ T + P
Sbjct: 441 YGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPT 500
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS L Y K P +A T M + R + +AYS +L ++ + ++K
Sbjct: 501 LKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYK 560
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+M+ ++ + Y ++ +L K+ + E + + E I G + +IL+
Sbjct: 561 EMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILV 613
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVV 115
+ K+ + EA++ +M E GF +N +L +Y++ K Q+ Q +K++ PD
Sbjct: 930 RGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDED 989
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TYN + + E E++ ++P +Y +L + + K +L E+A +E+
Sbjct: 990 TYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEEL 1049
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + C+ +R Y +++ +Y N G + R++ M + A ++ S G+
Sbjct: 1050 QSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQP 1109
Query: 236 EKAENIYDEWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
++AE + + +G+ +P + ++ AY+ + ++ +G++P + W
Sbjct: 1110 QEAEKVLSNLKE-TGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIW 1166
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 127/295 (43%), Gaps = 14/295 (4%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+++ PD T +A++ Y + S +AE L + GF + YN +L +
Sbjct: 349 FDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAR 408
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G ++KV ++ +E+ K D +TYN + Q E A + + +++ + +PD ++
Sbjct: 409 EGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVT 468
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L K +AA + EM + YS+L+ Y G E + M+
Sbjct: 469 YTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCML 528
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + Y+ ++ ++ E ++A +Y E T D + ++L N++E
Sbjct: 529 RSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVE 588
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
R++ + C + ++ L KG EC+ +A +R+ + DH
Sbjct: 589 D----IGRVIRDMEEICGMNTQTIS-SILVKG------ECYDEAAKMLRRAISDH 632
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 160/399 (40%), Gaps = 19/399 (4%)
Query: 23 AQALQTRARENFFENLPDKMRGP----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A RAR F + D GP DT + LL + + + + E +++++ + GF
Sbjct: 825 ASGCYERARAIFNTMMRD---GPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKI 881
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAF 137
ML+ + G + +V ++ +K P + Y + + E
Sbjct: 882 SKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAML 941
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+++ PD ++++ +Y+ +E K + +++ + Y++L+ +Y
Sbjct: 942 SEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRD 1001
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+E + +M + Y +++S K E+AE +++E +S D
Sbjct: 1002 HRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFY 1061
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEKVLECFKK 314
+ ++ Y N AE ++ + G++P T LL Y GQ EKVL K+
Sbjct: 1062 HTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKE 1121
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
GS +P +I A GD + L+ ++ G E + + + +A
Sbjct: 1122 T-GSNLSTLPYSSVIDAYL----RNGDYNIGIQKLIQMKKEG---LEPDHRIWTCFIRAA 1173
Query: 375 KMPLIIVERMQKDNVQMDAETQKVLKITSEMPVSEVSSI 413
+ E + N DA +++ +E P S VS++
Sbjct: 1174 SLSRRTSEAIVLLNALQDAGFDLPIRLLTEKPESLVSAL 1212
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 5/346 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T S L+H Y++N AE L+++M + G + Y +L Y + ++KV +
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + D Y + + +S + E A + E++K PD YS+L S K
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA L EM K+ N V Y++L+ G ++ +++ N YT +
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G+ A +Y+E + T D V ++L + LE A + +G
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG- 672
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+++ L G+ K+G+M++ L+ +G R VP+ I + L E G +
Sbjct: 673 HASISSFNNLVDGFCKRGKMQETLKLLHVIMG--RGLVPNALTIENIISGLSEAGKLSEV 730
Query: 346 EHLLVTLRN-AGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQ 390
+ V L+ + ++SL GK+PL +V+ M +D+ +
Sbjct: 731 HTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 776
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 149/368 (40%), Gaps = 42/368 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++H Q+ + +A L+E+M+ G Y +++ Y G + ++ ++
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N PD+ YN + + E + K F ++++ + P+ +YS L Y+K
Sbjct: 389 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDL 448
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-------------- 211
E A ++ M + N V Y LL Y ++V +K M+
Sbjct: 449 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 508
Query: 212 -----------SLFAKMNDAE----------YTCVISSLVKLGEFEKAENIYDEWESISG 250
+ F +++ E Y+ +IS L K + EKA I DE S G
Sbjct: 509 IHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM-SKKG 567
Query: 251 TGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
DP + N L+ + A + +N ++ KG+ P T+ L G K G +
Sbjct: 568 V-DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLR 368
+ + + + PD + + GD++ A L+ + GH S +N+L+
Sbjct: 627 FYLYNEMLAT--GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVD 684
Query: 369 TYAKAGKM 376
+ K GKM
Sbjct: 685 GFCKRGKM 692
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 155/350 (44%), Gaps = 10/350 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLN 88
F +++ D PD T AL++ ++++S EA+AL+++MS C LK P + Y ++++
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS-CAELK-PNVVVYANLID 230
Query: 89 LYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
++ G D+ +M++E+ P+ +TY+ + + A ++ + P
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D I+Y+ + + + + A L EME N YS ++ G ++ +
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
++M + K N Y +IS + G A I+D+ ++ D N L+
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
++E + ++ ++ +G+ P T+ L GYLK G +E + ++ + + K P+
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK--PNDV 468
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ + DI+ ++ + G + IY L+ + +G M
Sbjct: 469 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 17/312 (5%)
Query: 3 RRRPHGAQVRAQSYRQ--RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKK 60
R P V +Y++ RV A + R+ L +R C+ALL ++
Sbjct: 44 HRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRD---RGLAPSIR---CCNALLKDLLR--- 94
Query: 61 SAEAEALM----EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVV 115
A+A AL+ E M G Y+ ++ Y + D ++L E++ + + V
Sbjct: 95 -ADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTV 153
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TYN+ +A E A +++ + PD +Y L + K +A L EM
Sbjct: 154 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 213
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ N V Y++L+ + G DE ++ K+M++ + N Y ++ L K+G+
Sbjct: 214 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 273
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
++A + + S D N+++ + + + A + + GI P T+ ++
Sbjct: 274 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIM 333
Query: 296 TWGYLKKGQMEK 307
G + G+ EK
Sbjct: 334 IHGLCQSGEPEK 345
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 176/397 (44%), Gaps = 15/397 (3%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+ L+ R + ++PD + C++L+ + ++ K+ +A +ME + G + + Y
Sbjct: 124 EGLKFLERMIYQGDIPDVI----ACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY 179
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKK 142
N ++ Y +G++DK ++L+ + + +PDVVTYN L + C S KE E +L++
Sbjct: 180 NVLIGGYCKSGEIDKALEVLERM--SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR 237
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ PD I+Y+ L +A L EM K+ C+ + V Y+ L++ G DE
Sbjct: 238 -ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 296
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
++ M S K N + ++ S+ G + AE + + + NIL+
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ L A ++ G P ++ L G+ ++ +M++ +E + + R
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS--RGC 414
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLII- 380
PD L + G +D A +L L + G I YN+++ K GK +
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474
Query: 381 -VERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
+E M++ ++ D T L + E V E IF
Sbjct: 475 LLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + + A ++EKM + G + L YN +L+ + ++D+ + L+ +
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD+VTYN L A + A + +L P I+Y+T+ K+
Sbjct: 410 VSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A L+EM ++ + + + YS+LL G DE ++I+ M L K + Y +
Sbjct: 470 EYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAI 529
Query: 226 ISSLVKLGEFEKA 238
+ L K + +A
Sbjct: 530 MLGLCKAQQTSRA 542
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 165/394 (41%), Gaps = 45/394 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDKVPQM 102
T + ++HSY + + A+ ++ +M + +C P +N +++ G +D +
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEK----RCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + + P +VTYN L + A++ F + + + PD S++ L + +
Sbjct: 215 VDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ ++A KEM+ R + V++S L+ L++ G D ++M L +
Sbjct: 275 VGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT VI + G +A + DE D N LL +++L AE N +
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----------------GSVRK---- 321
+G+ P T+ L GY ++G E L+ F + G RK
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLA 454
Query: 322 -----W--------VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
W +P+H + + E+G ++ A L + G++ + YNS++
Sbjct: 455 KANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514
Query: 368 RTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+ Y ++G K +++M++DNV D T L
Sbjct: 515 KGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 137/345 (39%), Gaps = 6/345 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F++ + + PD S L+ + + + A A + +M G + + Y ++ +
Sbjct: 284 FYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFC 343
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + ++ E+ PDVVTYN L Q+ AEK E+++ + PD
Sbjct: 344 RAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLC 403
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++TL Y + E A + ++ R + V Y+SL+ G + +W M
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ N Y+ +I S + G+ E A DE + R N ++ Y +
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ + F ++ + P T+ L GY+K+ M F I PD
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFN--IMEKEMVRPDAVTYN 581
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
N EQG++ A + + ++G Y SL+ + AG
Sbjct: 582 MIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 14/226 (6%)
Query: 31 RENFFEN--------LPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
R+ FEN L ++R PD T ++L+ + A+A L + M L
Sbjct: 414 RQGNFENALQLFDTLLRQRLR-PDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNH 472
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAA-CASQNDKETAEKAFL 138
+ Y+ +++ + GQ++ L E+ KK P++ TYN + C S N K+ ++
Sbjct: 473 ITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKK-GQQFLQ 531
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
++++ + PD I+++TL YIK E A MEK R + V Y+ +++ ++ G
Sbjct: 532 KMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQG 591
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ R++K M + + Y +I+ V G ++A ++DE
Sbjct: 592 NMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDE 637
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 140/343 (40%), Gaps = 22/343 (6%)
Query: 45 PDTCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPY---NHMLNLYISNGQLDKVP 100
P L+ +Y Q++K EA EA + + P+P N +L + G P
Sbjct: 87 PQVFDLLIRTYTQSRKPREAFEAFRLLLDH----RVPVPASASNALLAVLSRAGW----P 138
Query: 101 QMLQE-----LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
+ QE L ++ + T N+ + + + + A+ E++K + PD ++++ L
Sbjct: 139 HLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVL 198
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+ + A + M R + V Y+S+L D+ +++ M
Sbjct: 199 IDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSV 258
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
+ + +I ++GE ++A Y E + T D + L+ + R +++ A +
Sbjct: 259 APDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGA 318
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK 335
+ + G+ P + ++ G+ + G M + L + +G +PD N
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF--GCLPDVVTYNTLLNG 376
Query: 336 LEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
L +Q + AE LL + G V+ ++ + +L+ Y + G
Sbjct: 377 LCKQHRLLDAEKLLNEMEERG-VTPDLCTFTTLIHGYCRQGNF 418
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 36 ENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
E LP+ + T S L+ S+ + + +A +++M + G L YN ++ Y +G
Sbjct: 467 EILPNHI----TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGN 522
Query: 96 LDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
+ K Q LQ++++ N PD++T+N + + + A F ++K + PD ++Y+
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNM 582
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
+ + + + + A K M +R Y SL++ + G + ++ +M+
Sbjct: 583 IINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMI 639
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
NLP+ +R T ++++ Y ++ + + ++KM + + +N +++ YI +
Sbjct: 503 NLPN-IR---TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENM 558
Query: 97 DKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
+ ++K PD VTYN+ + + Q + + A + F + + I+PD +Y +L
Sbjct: 559 HGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSL 618
Query: 156 TSLYIKMELPEKAATTLKEMEKR 178
+ ++ ++A EM R
Sbjct: 619 INGHVTAGNSKQAFQLHDEMIHR 641
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 5/286 (1%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A E +F +P R + T ALL+ Y K +A + +M E G N+++
Sbjct: 134 AAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLM 193
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
LY+ GQ K + E+K +N PD +T + + + A+ N +T ++ F + +
Sbjct: 194 GLYLELGQHSKAANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETFYNMSLLDVP 253
Query: 147 PDWISYSTLTSLYIKMELPEKAATT-LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
W + TL S+Y+ + E+A ++ E R + L+ + ++G V R
Sbjct: 254 KQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFASIGSLRGVNR 313
Query: 206 IWKKM-MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+WK + M+ + Y ++ L KLG+ ++ + IY EWE DPR+ N+L A+
Sbjct: 314 VWKDIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAH 373
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ AE + ++ +G + T EL YL KG L+
Sbjct: 374 LRNGMTNEAELLWEKVKERGGDFDFETCELFREHYLGKGDTTSALK 419
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 176/419 (42%), Gaps = 45/419 (10%)
Query: 38 LPDKMRGPDT-C-SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
L M PD C + L+ +Y + K+ EAE M + L +N ++ Y GQ
Sbjct: 92 LQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQ 151
Query: 96 LDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
L++ ++L E+K+ N SP +VTYN +L + AE F E++ + P +++
Sbjct: 152 LERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTL 211
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL------------------------ 190
+ ++Y K KA + M K C + Y++L
Sbjct: 212 MINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVG 271
Query: 191 -----------LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
L Y+ G+ +++ M+ K + Y +I + + G A+
Sbjct: 272 FVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQ 331
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
IYD + + + +LL+A++ ++ AE+F RL + G++P + L Y
Sbjct: 332 AIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAY 391
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS 359
G+M+K+ ++ GSV K PD + N + G I+ AE + +L + G
Sbjct: 392 GNSGRMDKMESLYESMQGSVCK--PDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTP 449
Query: 360 TEI-YNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVLKITSEMP--VSEVSSI 413
+ + SL+ Y+K + + + ++M D T KVL + P V EV+ +
Sbjct: 450 DVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSCRGPEQVKEVTDM 508
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 3/276 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+A + E+ F+++ + P T +AL++++ + AE + ++ GF+
Sbjct: 217 GKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDI 276
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
YN +L Y G ++ + L+ D V+YN+ + A A+ +
Sbjct: 277 YTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDS 336
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+KK P S+ L S ++K A ++ +E + ++SLL Y N G
Sbjct: 337 MKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGR 396
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D++ +++ M K + +I+ + G E+AE I++ ES T D
Sbjct: 397 MDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTS 456
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
L+ AY R S Y +++ G P T ++L
Sbjct: 457 LMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVL 492
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SAL+ +Y ++ EA ++ M E G + YN +++ G + +V + E++
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+N PD +T+N LA C+ E A F E+ +I+ D SY+TL K +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A L +M + N V+YS+++ + G DE L ++ +M L ++ Y ++
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S K+G E+A +I E S+ D N LL Y + + + + + + + +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L GY K G ++ +E F++ + + D L +A + L + G + A
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR--ADVVLYSALIDALCKNGLVGSAV 569
Query: 347 HLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
L+ + G +S + YNS++ + ++ M
Sbjct: 570 SLIDEMTKEG-ISPNVVTYNSIIDAFGRSATM 600
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 3/277 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF+ + PD T ++LL + A L ++M+ + YN +L+
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
GQ+D ++L ++ K P+VV+Y+ + A + A F E++ I D +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY+TL S+Y K+ E+A L+EM +K+ V Y++LL Y G DEV +++ +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
N Y+ +I K G +++A I+ E++S D + + L+ A +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
A S + + +GI P T+ + + + M++
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S ++ + + + EA L +M G + YN +L++Y G+ ++ +L+E+
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
DVVTYN L Q + +K F E+K+ + P+ ++YSTL Y K L ++
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +E + R + V YS+L+ G + + +M N Y +I
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 228 SLVKLGEFEKAEN 240
+ + +++ +
Sbjct: 593 AFGRSATMDRSAD 605
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 157/345 (45%), Gaps = 8/345 (2%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M+KM E G L +N ++ L+ S G+ +P++L ++K + V TYN+ + A+
Sbjct: 176 MKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEAN 235
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+++ E K F E+K+ +++P+ +S+ L + L A ++ +EK N
Sbjct: 236 EHNVEGLIKVFGEMKRLEVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWST 295
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
L+ LY + ++ RIW + L + Y I + ++G+ +AE ++ E +
Sbjct: 296 LDVLIILYGYLRKGKKLDRIWGTVKEL-PHVRSKSYILAIEAFGRIGQLGRAEELWLEMK 354
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S+ G N +L+ Y ++ A + + G KP T+ L G LK +E
Sbjct: 355 SLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVE 414
Query: 307 KVLECFKKAI-----GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-T 360
+ L+ + + ++ +P + E+GD+ AE L A + T
Sbjct: 415 EALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYT 474
Query: 361 EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEM 405
+YN+L++ Y KA ++ RM + DAET ++K+ +
Sbjct: 475 FVYNTLIKAYVKAKVYVPYLLRRMILGGARPDAETYSLIKLIEQF 519
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SAL+ +Y ++ EA ++ M E G + YN +++ G + +V + E++
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+N PD +T+N LA C+ E A F E+ +I+ D SY+TL K +
Sbjct: 332 RNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A L +M + N V+YS+++ + G DE L ++ +M L ++ Y ++
Sbjct: 392 LAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLL 451
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S K+G E+A +I E S+ D N LL Y + + + + + + + +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVL 511
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L GY K G ++ +E F++ + + D L +A + L + G + A
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLR--ADVVLYSALIDALCKNGLVGSAV 569
Query: 347 HLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
L+ + G +S + YNS++ + ++ M
Sbjct: 570 SLIDEMTKEG-ISPNVVTYNSIIDAFGRSATM 600
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 3/277 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF+ + PD T ++LL + A L ++MS + YN +L+
Sbjct: 326 FFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAIC 385
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
GQ+D ++L ++ K P+VV+Y+ + A + A F E++ I D +
Sbjct: 386 KGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRV 445
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY+TL S+Y K+ E+A L+EM +K+ V Y++LL Y G DEV +++ +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM 505
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
N Y+ +I K G +++A ++ E++S D + + L+ A +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
A S + + +GI P T+ + + + ME+
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMER 602
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 3/206 (1%)
Query: 38 LPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
+P K P+ S ++ + + + EA L +M + YN +L++Y G+
Sbjct: 400 MPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGR 459
Query: 96 LDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
++ +L+E+ DVVTYN L Q + +K F E+K+ + P+ ++YST
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYST 519
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L Y K L ++A +E + R + V YS+L+ G + + +M
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAEN 240
N Y +I + + E++ +
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMERSAD 605
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 26/222 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL Y + K E + + +M L L Y+ +++ Y G + ++ +E
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREF 540
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K DVV Y+ + A +A E+ K I P+ ++Y+++ + +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 166 EKAA------------TTLKEMEKRTCRKNRVA--YSSLLSLYTNMGYKDE--------- 202
E++A + L E+ + NRV + L S N KD
Sbjct: 601 ERSADYSNGGSLPFSSSALSELTE--TEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSC 658
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+L +++KM L K N ++ ++++ + FE A + +E
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 153/331 (46%), Gaps = 5/331 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SA++ +Y ++ + EA + + M + G + YN +++ G L K + +E++
Sbjct: 238 SAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQ 297
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K PD +T+N +A C+ + E +++ F E+++ I+ D +Y+TL K E
Sbjct: 298 KEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQME 357
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
AA+ + M + N V YS+++ Y +G +E + ++ M + + Y +I
Sbjct: 358 LAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLI 417
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
KLG F+ A + E + D N L+ AY + + + A ++++ +G+
Sbjct: 418 DIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLV 477
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L Y K G + F + + K PD L ++ + + G ++ A
Sbjct: 478 PNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLK--PDVVLYSSLIDSCCKCGLVEDAV 535
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
LL + AG + YNSL+ Y + G++
Sbjct: 536 VLLQEMTQAGIQPNIVTYNSLIDAYGRNGQV 566
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + + PD T ++L+ + +++ + +M G + YN +++
Sbjct: 291 DIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAV 350
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
GQ++ ++ ++ KN SP+VVTY+ + E A + ++K++ + PD
Sbjct: 351 CKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDR 410
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+SY+TL +Y K+ + A T K+ME+ + + V Y++L+ Y G + ++ K
Sbjct: 411 VSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDK 470
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + N Y+ +I + K G + A +I+ E++ D + + L+ +
Sbjct: 471 MKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGL 530
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
+E A + GI+P T+ L Y + GQ++ V
Sbjct: 531 VEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNV 569
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++ Y + EA L M E G + YN ++++Y G+ D +++
Sbjct: 377 TYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDM 436
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ DVVTYN + A Q + A F ++K + P+ ++YS L Y K +
Sbjct: 437 ERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMH 496
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A + E ++ + + V YSSL+ G ++ + + ++M + N Y +
Sbjct: 497 QDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSL 556
Query: 226 ISSLVKLGEFEKAE 239
I + + G+ + E
Sbjct: 557 IDAYGRNGQVDNVE 570
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 139/315 (44%), Gaps = 15/315 (4%)
Query: 69 EKMSECGFLKCPLPYNHMLNLYISN-GQLDKVPQMLQEL----KKNTSPDVVTYNLWLAA 123
E M + G L+ ++ + ++ IS G+L KV L K +V Y+ ++A
Sbjct: 186 EWMVQQGHLRSE--WSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSA 243
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP-EKAATTLKEMEKRTCRK 182
A K F +KK P+ I+Y+T+ K + +KA +EM+K
Sbjct: 244 YGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEP 303
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+R+ ++SL+++ + ++ R++ +M + + Y +I ++ K G+ E A +I
Sbjct: 304 DRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIM 363
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ + + + ++ Y E A Y+ + G++P ++ L Y K
Sbjct: 364 SSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKL 423
Query: 303 GQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
G+ + L K + +G ++ V + + AY K QG A L ++ G V
Sbjct: 424 GRFDDALTACKDMERVG-LKADVVTYNALIDAYGK---QGKYKDAAGLFDKMKAEGLVPN 479
Query: 361 EI-YNSLLRTYAKAG 374
+ Y++L+ Y+KAG
Sbjct: 480 VLTYSALIDAYSKAG 494
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 20/255 (7%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A F +K + +YS + S Y + +A + M+K C+ N + Y+++
Sbjct: 216 EIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTI 275
Query: 191 LSLYTNMGYK-DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
+ G + L I+++M + + + +I+ + +E ++ ++ E +
Sbjct: 276 IDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRG 335
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D N L+ A Q+E+A S + + K I P T+ + GY K G
Sbjct: 336 IEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLG------ 389
Query: 310 ECFKKAIG--------SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVST 360
CF++AIG VR + + Y KL G D A + G
Sbjct: 390 -CFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKL---GRFDDALTACKDMERVGLKADV 445
Query: 361 EIYNSLLRTYAKAGK 375
YN+L+ Y K GK
Sbjct: 446 VTYNALIDAYGKQGK 460
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 130/262 (49%), Gaps = 13/262 (4%)
Query: 33 NFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY-- 90
NF E++P+ +R ++LL SYV+ +AE+ +KM E G L PYN M +LY
Sbjct: 114 NFVESIPENLRNESIYNSLLSSYVRRNDLDKAESTFKKMRELGLLLRASPYNSMTSLYRR 173
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
I +G KV ++L+E+K+ N D T N L A T EK FL + DW
Sbjct: 174 IPHGNRCKVDEILREMKESNIKLDRDTVNNALRVYADVTHIATMEK-FLAEWEGNTPLDW 232
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCR-KNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++ + Y++ KA KEM +RT ++ +Y L+ LY G + +V R+W
Sbjct: 233 LTRLDMAKAYLRSGFKGKA----KEMLRRTEELRDPKSYEELMRLYGEAGGRKDVYRVWD 288
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI-YDEWESISGTGDPRVPNILLAAYINR 267
L K N+ + +I SL+KL + AE Y EWE D R+P +L+++Y +
Sbjct: 289 LYKKLSKKDNEG-FRALIGSLLKLDDINGAEEFYYKEWECSGLPFDVRIPTMLVSSYREK 347
Query: 268 NQLEMAESFYNRLVT--KGIKP 287
+E A+ ++ + +KP
Sbjct: 348 GMVEKADKLIKEIMKNEESVKP 369
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 30/264 (11%)
Query: 14 QSYRQRVAQAQ-ALQTRARENFFE-NLPDKMRGPDTCSALLHSYVQNKKSAE-AEALMEK 70
Q Y R+ + L E FFE ++P+ M+ LL Y ++ K+ + AEA+ EK
Sbjct: 423 QDYAARLHMIENVLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKTLDKAEAIFEK 482
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQND 129
M + GFL P P+N M++LY G+ +KV ++ ++K N PD +T N L A + D
Sbjct: 483 MGDLGFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNVLRMYADETD 542
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP-----EKAATTLKEMEKRTCRKNR 184
+T +K E WI+ T L ++ + E+A LK +E T KN
Sbjct: 543 IKTMDKYKRE---------WINAEKNTKLEMRTMVAMANAYERAGLLLKAIEI-TRSKNE 592
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWK----KMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
V L+ YK++ R +K + + + D EY VISSL+KL + + AE
Sbjct: 593 VH-----RLWNE--YKEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLKLDDLKGAEE 645
Query: 241 IYDEWESISGTGDPRVPNILLAAY 264
IY EWE + R+P ++++ Y
Sbjct: 646 IYGEWEPEGPEFNTRIPCLIISRY 669
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 37/372 (9%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGF 76
+V+ A +L ++ FE PD ++L+ + V N + EA + +KM E G
Sbjct: 13 KVSVAASLLNNLHKDGFE--------PDVYAYTSLITACVSNGRYREAVMVFKKMEEEGC 64
Query: 77 LKCPLPYNHMLNLYISNGQ-LDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAE 134
+ YN +LN+Y G +K+ + + +K PD TYN + C + E A
Sbjct: 65 KPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAA 124
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
F ++K PD ++Y+TL +Y K ++A L+EME C + V Y+SL+S Y
Sbjct: 125 AVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAY 184
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G +E + + +M+ K++ YT ++S V+ G+ E A +++E + +
Sbjct: 185 ARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNI 244
Query: 255 RVPNILLAAYINRNQL-EMAESFYNRLVTKGIKPCYTTWELLTWGYL-----KKGQMEKV 308
N L+ + NR + EM + F + IK C +++TW L + G +V
Sbjct: 245 CTFNALIKMHGNRGKFAEMMKVF------EEIKICCCVPDIVTWNTLLAVFGQNGMDSEV 298
Query: 309 LECFK--KAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEI 362
FK K +G +VP+ + + +AY++ G D A + + + G
Sbjct: 299 SGVFKEMKRVG----FVPERDTYNTLISAYSRC---GSFDQAMAMYKRMLDTGITPDLST 351
Query: 363 YNSLLRTYAKAG 374
YN++L A+ G
Sbjct: 352 YNAVLAALARGG 363
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 134/283 (47%), Gaps = 6/283 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
FE + + PD T + L+ + EA A+ E M GF+ + YN +L++Y
Sbjct: 90 GLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVY 149
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ + ++L+E++ N SP +VTYN ++A A E A + ++ + I D
Sbjct: 150 GKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDV 209
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+ + S +++ E A +EM C+ N +++L+ ++ N G E+++++++
Sbjct: 210 FTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEE 269
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + +++ + G + ++ E + + + N L++AY
Sbjct: 270 IKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGS 329
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVL 309
+ A + Y R++ GI P +T+ + + G Q EK+L
Sbjct: 330 FDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKIL 372
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 151/330 (45%), Gaps = 6/330 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ +Y ++ EA L +M E G Y ML+ ++ G+ + ++ +E+
Sbjct: 176 TYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEM 235
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P++ T+N + ++ K F E+K PD ++++TL +++ + +
Sbjct: 236 RTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMD 295
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ + KEM++ R Y++L+S Y+ G D+ + ++K+M+ + + Y V
Sbjct: 296 SEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAV 355
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++L + G +E++E I E + + LL AY N ++ + + + I
Sbjct: 356 LAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVI 415
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLITAAYNKLEEQGDIDG 344
+P + L L + + +LE + + RK + PD + A + +
Sbjct: 416 EPHAVLLKTLV---LVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTK 472
Query: 345 AEHLLVTLRNAGHV-STEIYNSLLRTYAKA 373
+L ++ +G S YNSL+ ++++
Sbjct: 473 TNEILNFMKESGFTPSLATYNSLMYMHSQS 502
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L K PD T +A++ Y + + + ++ M E GF YN ++ +
Sbjct: 439 ERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYM 498
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ + ++ ++L+E L K PD+++YN + A + A F E++++ + PD
Sbjct: 499 HSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPD 558
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I+Y+T + Y + E+A + M K C+ N+ Y+S++ Y + +D+ ++
Sbjct: 559 VITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFIS 618
Query: 209 KMMSL 213
+ L
Sbjct: 619 SLHEL 623
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 4/232 (1%)
Query: 86 MLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++N+ G++ +L L K+ PDV Y + AC S A F ++++
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
P I+Y+ + ++Y KM +P T L E M+ + Y++L++ +E
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-NILLA 262
+++ M S+ + Y ++ K ++A + E E ++G V N L++
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREME-VNGCSPSIVTYNSLIS 182
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
AY LE A N++V +GIK T+ + G+++ G+ E + F++
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEE 234
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 152/382 (39%), Gaps = 51/382 (13%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + P+ C+ AL+ + K AE + E++ C + + +N +L ++
Sbjct: 232 FEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQ 291
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
NG +V + +E+K+ P+ TYN ++A + + A + + T I PD +
Sbjct: 292 NGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLST 351
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ + + + L E++ L EM+ C+ N + + SLL Y N +L + +++
Sbjct: 352 YNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEIC 411
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN--- 268
S + + ++ K +AE + E + + D N ++A Y R
Sbjct: 412 SGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVT 471
Query: 269 --------------------------------QLEMAESFYNRLVTKGIKPCYTTWELLT 296
E +E ++ KGIKP ++ +
Sbjct: 472 KTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVI 531
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAY---NKLEEQGDIDGAEHLLV 350
+ Y + G+M++ F + S +PD + A+Y + EE D+ +
Sbjct: 532 FAYCRNGRMKEASHIFSEMRES--GLIPDVITYNTFVASYAADSMFEEAIDV-----VCY 584
Query: 351 TLRNAGHVSTEIYNSLLRTYAK 372
+++ + YNS++ Y K
Sbjct: 585 MIKHGCKPNQNTYNSVIDGYCK 606
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 167/360 (46%), Gaps = 9/360 (2%)
Query: 42 MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD--KV 99
+R + +AL+++Y +N + + L+E+M L YN ++N + G LD +
Sbjct: 180 IRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGL 238
Query: 100 PQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ E++ + PD+VTYN L+ACA++ + AE F + + I P+ +YS +
Sbjct: 239 LGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVET 298
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ K+ EK A LKEME + +Y+ L+ + +G E + ++K+M + N
Sbjct: 299 FGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPN 358
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ Y+ +++ K G ++ ++ + + S D NIL+ + + + ++
Sbjct: 359 ASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFH 418
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
LV + I P T+E L + K G E + G + VP + + +
Sbjct: 419 DLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNG--KGIVPSSKAYSGLIEAYGQ 476
Query: 339 QGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAET 395
D A T+ G ST + YNSL+ T+A+ G K I+ RM++ + +A++
Sbjct: 477 AALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKS 536
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 108/271 (39%), Gaps = 1/271 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S LL+ Y ++ + + L +M E YN ++ ++ G +V + +L
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N P++ TY + AC E A+K + I P +YS L Y + L
Sbjct: 421 VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A M + + Y+SL+ + G E I +M N ++ +
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + G++E+A + E E + D + +L Y ++ ++ + + GI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGI 600
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
P + ++ Y K G+ + E + I
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDASELLDEMI 631
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/331 (16%), Positives = 135/331 (40%), Gaps = 4/331 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++ ++ + K + L+++M G+L YN ++ + G + + + +++
Sbjct: 291 TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P+ TY++ L + + FL++K++ +PD +Y+ L ++ +
Sbjct: 351 QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYF 410
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ T ++ N Y L+ G ++ +I M + Y+ +
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGL 470
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + + +++A ++ + N L+ + + E+ +R+ GI
Sbjct: 471 IEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGI 530
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
++ + GY + GQ E+ ++ F + + D + + G +D +
Sbjct: 531 SRNAKSFSGIIEGYRQSGQYEEAIKAFVEM--EKMRCELDEQTLEGVLGVYCFAGLVDES 588
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
+ + ++ +G + S Y +L YAK G+
Sbjct: 589 KEQFIEIKASGILPSVLCYCMMLAVYAKNGR 619
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 48/277 (17%)
Query: 166 EKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+++ K M+++ C+ N Y+ ++SL G ++ I+ +M S + YT
Sbjct: 129 QRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTA 188
Query: 225 VISSLVKLGEFEKAENIYD--------------------------EWESISG-------- 250
+I++ + G++E + + + +WE + G
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 248
Query: 251 --TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D N LL+A R + AE + ++ GI P TT+ + + K G++EKV
Sbjct: 249 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 308
Query: 309 LECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYN 364
K+ ++PD + ++ A+ KL G I A + ++ AG V + Y+
Sbjct: 309 AMLLKEM--ESEGYLPDISSYNVLIEAHAKL---GSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 365 SLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
LL Y K G+ + + +M++ + + DA T +L
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNIL 400
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT ++L+H++ + E EA++ +M E G + ++ ++ Y +GQ ++ + E
Sbjct: 500 DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVE 559
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++K D T L + +++ F+E+K + I P + Y + ++Y K
Sbjct: 560 MEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGR 619
Query: 165 PEKAATTLKEMEK 177
+ A+ L EM K
Sbjct: 620 WDDASELLDEMIK 632
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 47/262 (17%)
Query: 182 KNRVA---YSSLLSLYTNMGYKDEVLRIWKKMM-SLFAKMNDAEYTCVISSLVKLGEFEK 237
KNR++ +S + + G LR++K M ++ K N+ YT +IS L + G EK
Sbjct: 107 KNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 166
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQ----LEMAESF-----------YNRLVT 282
I+DE S L+ AY Q LE+ E YN ++
Sbjct: 167 CSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVIN 226
Query: 283 ---------------------KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVR 320
+G++P T+ L +G ++ FK I G +
Sbjct: 227 ACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIV 286
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAG--KMP 377
+ + I + KL G ++ LL + + G++ YN L+ +AK G K
Sbjct: 287 PEITTYSYIVETFGKL---GKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEA 343
Query: 378 LIIVERMQKDNVQMDAETQKVL 399
+ + ++MQ +A T +L
Sbjct: 344 MDVFKQMQAAGCVPNASTYSIL 365
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 167/360 (46%), Gaps = 9/360 (2%)
Query: 42 MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD--KV 99
+R + +AL+++Y +N + + L+E+M L YN ++N + G LD +
Sbjct: 180 IRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGL 238
Query: 100 PQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ E++ + PD+VTYN L+ACA++ + AE F + + I P+ +YS +
Sbjct: 239 LGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVET 298
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ K+ EK A LKEME + +Y+ L+ + +G E + ++K+M + N
Sbjct: 299 FGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPN 358
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ Y+ +++ K G ++ ++ + + S D NIL+ + + + ++
Sbjct: 359 ASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFH 418
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
LV + I P T+E L + K G E + G + VP + + +
Sbjct: 419 DLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNG--KGIVPSSKAYSGLIEAYGQ 476
Query: 339 QGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAET 395
D A T+ G ST + YNSL+ T+A+ G K I+ RM++ + +A++
Sbjct: 477 AALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKS 536
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 108/271 (39%), Gaps = 1/271 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S LL+ Y ++ + + L +M E YN ++ ++ G +V + +L
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N P++ TY + AC E A+K + I P +YS L Y + L
Sbjct: 421 VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A M + + Y+SL+ + G E I +M N ++ +
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + G++E+A + E E + D + +L Y ++ ++ + + GI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGI 600
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
P + ++ Y K G+ + E + I
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDASELLDEMI 631
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/331 (16%), Positives = 135/331 (40%), Gaps = 4/331 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++ ++ + K + L+++M G+L YN ++ + G + + + +++
Sbjct: 291 TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P+ TY++ L + + FL++K++ +PD +Y+ L ++ +
Sbjct: 351 QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYF 410
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ T ++ N Y L+ G ++ +I M + Y+ +
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGL 470
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + + +++A ++ + N L+ + + E+ +R+ GI
Sbjct: 471 IEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGI 530
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
++ + GY + GQ E+ ++ F + + D + + G +D +
Sbjct: 531 SRNAKSFSGIIEGYRQSGQYEEAIKAFVEM--EKMRCELDEQTLEGVLGVYCFAGLVDES 588
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
+ + ++ +G + S Y +L YAK G+
Sbjct: 589 KEQFIEIKASGILPSVLCYCMMLAVYAKNGR 619
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 48/277 (17%)
Query: 166 EKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+++ K M+++ C+ N Y+ ++SL G ++ I+ +M S + YT
Sbjct: 129 QRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTA 188
Query: 225 VISSLVKLGEFEKAENIYD--------------------------EWESISG-------- 250
+I++ + G++E + + + +WE + G
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 248
Query: 251 --TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D N LL+A R + AE + ++ GI P TT+ + + K G++EKV
Sbjct: 249 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 308
Query: 309 LECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYN 364
K+ ++PD + ++ A+ KL G I A + ++ AG V + Y+
Sbjct: 309 AMLLKEM--ESEGYLPDISSYNVLIEAHAKL---GSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 365 SLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
LL Y K G+ + + +M++ + + DA T +L
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNIL 400
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT ++L+H++ + E EA++ +M E G + ++ ++ Y +GQ ++ + E
Sbjct: 500 DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVE 559
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++K D T L + +++ F+E+K + I P + Y + ++Y K
Sbjct: 560 MEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGR 619
Query: 165 PEKAATTLKEMEK 177
+ A+ L EM K
Sbjct: 620 WDDASELLDEMIK 632
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 47/262 (17%)
Query: 182 KNRVA---YSSLLSLYTNMGYKDEVLRIWKKMM-SLFAKMNDAEYTCVISSLVKLGEFEK 237
KNR++ +S + + G LR++K M ++ K N+ YT +IS L + G EK
Sbjct: 107 KNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 166
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQ----LEMAESF-----------YNRLVT 282
I+DE S L+ AY Q LE+ E YN ++
Sbjct: 167 CSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVIN 226
Query: 283 ---------------------KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVR 320
+G++P T+ L +G ++ FK I G +
Sbjct: 227 ACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIV 286
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAG--KMP 377
+ + I + KL G ++ LL + + G++ YN L+ +AK G K
Sbjct: 287 PEITTYSYIVETFGKL---GKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEA 343
Query: 378 LIIVERMQKDNVQMDAETQKVL 399
+ + ++MQ +A T +L
Sbjct: 344 MDVFKQMQAAGCVPNASTYSIL 365
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 144/329 (43%), Gaps = 3/329 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ Y K +A +L+E+ G + + YN +L+ GQ+D+ + +E+KK
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ P++ TYN+ + ETA +K + P+ I+ + + K + + A
Sbjct: 404 DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ + ++ +TCR + V Y SL+ G DE +++++M+ N YT +I +
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K G E IY+E + + D + N + ++E + + + G P
Sbjct: 524 FFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD 583
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
++ +L G +K G + E F + V D R + + G ++ A L
Sbjct: 584 ARSYTILIHGLVKAGFAHEAYELFYTM--KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L ++ GH T + Y S++ AK ++
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 162/394 (41%), Gaps = 39/394 (9%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ +AQ L + FE L K PD T +L+ ++ + EA L E+M +
Sbjct: 453 RLCKAQRLDDAC--SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ + Y ++ + G+ + ++ E L+ SPD++ N ++ + E
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F E+K PD SY+ L +K +A M+++ C + AY++++ +
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G ++ ++ ++M + + Y VI L K+ ++A +++E +S +
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK- 314
+ + L+ + +++ A L+ KG+ P TW L +K ++ + L CF+
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750
Query: 315 -----------------AIGSVRK---------------WVPDHRLITAAYNKLEEQGDI 342
+ +RK + P+ T + L + G+I
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810
Query: 343 DGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGK 375
A+ L + G V+ + IYN+++ + A +
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIEGLSNANR 844
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 133/311 (42%), Gaps = 5/311 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACA 125
L ++M E G+ + ++ ++ G++D +L E+K N+ PDVV YN+ +
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A K F E+K + D ++Y+++ + K + +A + M++
Sbjct: 282 KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++++ Y G ++ + ++ + Y C++S L + G+ ++A ++E
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + NI++ +LE A + + G+ P T ++ K ++
Sbjct: 402 KK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYN 364
+ F+ + PD + L G +D A L + +A + + +Y
Sbjct: 461 DDACSIFEGL--DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518
Query: 365 SLLRTYAKAGK 375
SL+R + K G+
Sbjct: 519 SLIRNFFKCGR 529
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 36/272 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ L+H V+ + EA L M E G + YN +++ + +G+++K Q+L+E+K
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 647
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY-------- 159
K P VVTY + A + + A F E K I+ + + YS+L +
Sbjct: 648 KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDE 707
Query: 160 ---------------------------IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
+K E +A + M+ C N + YS L+
Sbjct: 708 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIH 767
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ ++ W++M K N YT +IS L K G +A+ ++++++ G
Sbjct: 768 GLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
D + N ++ N N+ A + KG
Sbjct: 828 DSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 121/286 (42%), Gaps = 4/286 (1%)
Query: 33 NFF---ENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
N+F E L D+ + ++LL + +K E ++E+MS GF ++
Sbjct: 115 NYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS 174
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+I + +L + +Q ++K P Y + A ++ D + F ++++ +
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++TL ++ + + A + L EM+ + + V Y+ + + G D + +
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFH 294
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M + ++D YT +I L K +A +++ + N ++ Y
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ E A S R KG P ++ + +KGQ+++ L+ F++
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/318 (18%), Positives = 124/318 (38%), Gaps = 3/318 (0%)
Query: 1 MERRRPHGAQVRAQSYRQRVA--QAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQN 58
+ER+R G SY ++ + A + F E D + T + ++ +
Sbjct: 363 LERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKA 422
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTY 117
K A + + M + G + N M++ +LD + + L T PD VTY
Sbjct: 423 GKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
+ + A K + ++ P+ + Y++L + K E EM +
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR 542
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
C + + ++ + G ++ +++++ +L + YT +I LVK G +
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHE 602
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
A ++ + D R N ++ + ++ A + TKG +P T+ +
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662
Query: 298 GYLKKGQMEKVLECFKKA 315
G K ++++ F++A
Sbjct: 663 GLAKIDRLDEAYMLFEEA 680
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 13/280 (4%)
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
YN L A E+ E+ P + + +IK +A T ++ M
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
K R AY++L+ + D +L ++++M L +N +T +I + G +
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
A ++ DE +S S D + N+ + + +++MA ++ + G+ T+ +
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMI 312
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTL 352
K ++ + +E F+ K VP AYN + G + A LL
Sbjct: 313 GVLCKADRLNEAVELFEHM--DQNKQVP----CAYAYNTMIMGYGMAGKFEDAYSLLERQ 366
Query: 353 RNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNV 389
R G + + + YN +L + G++ L E M+KD +
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI 406
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 144/329 (43%), Gaps = 3/329 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ Y K +A +L+E+ G + + YN +L+ GQ+D+ + +E+KK
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ P++ TYN+ + ETA +K + P+ I+ + + K + + A
Sbjct: 404 DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ + ++ +TCR + V Y SL+ G DE +++++M+ N YT +I +
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K G E IY+E + + D + N + ++E + + + G P
Sbjct: 524 FFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD 583
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
++ +L G +K G + E F + V D R + + G ++ A L
Sbjct: 584 ARSYTILIHGLVKAGFAHEAYELFYTM--KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L ++ GH T + Y S++ AK ++
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 162/394 (41%), Gaps = 39/394 (9%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ +AQ L + FE L K PD T +L+ ++ + EA L E+M +
Sbjct: 453 RLCKAQRLDDAC--SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ + Y ++ + G+ + ++ E L+ SPD++ N ++ + E
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F E+K PD SY+ L +K +A M+++ C + AY++++ +
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G ++ ++ ++M + + Y VI L K+ ++A +++E +S +
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK- 314
+ + L+ + +++ A L+ KG+ P TW L +K ++ + L CF+
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750
Query: 315 -----------------AIGSVRK---------------WVPDHRLITAAYNKLEEQGDI 342
+ +RK + P+ T + L + G+I
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810
Query: 343 DGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGK 375
A+ L + G V+ + IYN+++ + A +
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIEGLSNANR 844
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 36/272 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ L+H V+ + EA L M E G + YN +++ + +G+++K Q+L+E+K
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 647
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY-------- 159
K P VVTY + A + + A F E K I+ + + YS+L +
Sbjct: 648 KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDE 707
Query: 160 ---------------------------IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
+K E +A + M+ C N + YS L+
Sbjct: 708 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIH 767
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ ++ W++M K N YT +IS L K G +A+ ++++++ G
Sbjct: 768 GLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
D + N ++ N N+ A + KG
Sbjct: 828 DSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 133/311 (42%), Gaps = 5/311 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACA 125
L ++M E G+ + ++ ++ G++D +L E+K N+ PDVV YN+ +
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A K F E+K + D ++Y+++ + K + +A + M++
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++++ Y G ++ + ++ + Y C++S L + G+ ++A ++E
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + NI++ +LE A + + G+ P T ++ K ++
Sbjct: 402 KK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYN 364
+ F+ + PD + L G +D A L + +A + + +Y
Sbjct: 461 DDACSIFEGL--DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518
Query: 365 SLLRTYAKAGK 375
SL+R + K G+
Sbjct: 519 SLIRNFFKCGR 529
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 121/286 (42%), Gaps = 4/286 (1%)
Query: 33 NFF---ENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
N+F E L D+ + ++LL + +K E ++E+MS GF ++
Sbjct: 115 NYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS 174
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+I + +L + +Q ++K P Y + A ++ D + F ++++ +
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++TL ++ + + A + L EM+ + + V Y+ + + G D + +
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFH 294
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M + ++D YT +I L K +A +++ + N ++ Y
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ E A S R KG P ++ + +KGQ+++ L+ F++
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/318 (18%), Positives = 124/318 (38%), Gaps = 3/318 (0%)
Query: 1 MERRRPHGAQVRAQSYRQRVA--QAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQN 58
+ER+R G SY ++ + A + F E D + T + ++ +
Sbjct: 363 LERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKA 422
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTY 117
K A + + M + G + N M++ +LD + + L T PD VTY
Sbjct: 423 GKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
+ + A K + ++ P+ + Y++L + K E EM +
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR 542
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
C + + ++ + G ++ +++++ +L + YT +I LVK G +
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHE 602
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
A ++ + D R N ++ + ++ A + TKG +P T+ +
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662
Query: 298 GYLKKGQMEKVLECFKKA 315
G K ++++ F++A
Sbjct: 663 GLAKIDRLDEAYMLFEEA 680
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 13/280 (4%)
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
YN L A E+ E+ P + + +IK +A T ++ M
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
K R AY++L+ + D +L ++++M L +N +T +I + G +
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
A ++ DE +S S D + N+ + + +++MA F++ + G+ T+ +
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMI 312
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTL 352
K ++ + +E F+ K VP AYN + G + A LL
Sbjct: 313 GVLCKADRLNEAVELFEHM--DQNKQVP----CAYAYNTMIMGYGMAGKFEDAYSLLERQ 366
Query: 353 RNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNV 389
R G + + + YN +L + G++ L E M+KD +
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI 406
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 7/329 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD---KVPQMLQE 105
SAL+ +Y ++ EA ++E M G + YN +++ G +D + Q
Sbjct: 237 SALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDA-CGKGGVDLRFTLGYFRQM 295
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ PD T+N L+AC+ E A F E+ I D +Y+T K
Sbjct: 296 LRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNI 355
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A L +ME + + N V YS+L+ Y+ + DE L++++KM SL +++ Y V
Sbjct: 356 ELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTV 415
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ VK G++ + + DE E D N L+ Y + +L++ + +G+
Sbjct: 416 LAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGV 475
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L Y K G + S K PD L ++ + L + G ++ A
Sbjct: 476 APSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLK--PDVVLFSSFIDTLAKNGLVEWA 533
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
LL + G + YN+++ + K+
Sbjct: 534 LSLLNDMTEMGIKPNVVTYNTIIDAFGKS 562
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ Y + +K EA L EKM G + YN +L +Y+ G+ ++ + E+
Sbjct: 376 TYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEM 435
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ D VTYN + Q + ++++ + P ++YSTL +Y K +
Sbjct: 436 EDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMH 495
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A + ++ + + V +SS + G + L + M + K N Y +
Sbjct: 496 GDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTI 555
Query: 226 ISSLVK 231
I + K
Sbjct: 556 IDAFGK 561
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 127/318 (39%), Gaps = 31/318 (9%)
Query: 91 ISNGQLDK---VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
+ NG +DK + + L K + PD+ A +AF
Sbjct: 190 VGNGSVDKGKLLTAAIGALGKMSRPDL------------------ARRAFDAGIAGGYGN 231
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE-VLRI 206
+ S L S Y + L +A L+ M+ R V Y++++ G L
Sbjct: 232 TVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGY 291
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+++M+ + + ++S+ + G E A ++DE + D N + A
Sbjct: 292 FRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICK 351
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVP 324
+E+A + K +KP T+ L GY K + ++ L+ ++K ++G V
Sbjct: 352 CGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVC 411
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IV 381
+ + A Y K + G+I + + ++G T YNSL+ Y K G++ ++ +V
Sbjct: 412 -YNTVLAIYVKAGKYGEI---AIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLV 467
Query: 382 ERMQKDNVQMDAETQKVL 399
+ M++ V T L
Sbjct: 468 QDMRRRGVAPSVLTYSTL 485
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 167/364 (45%), Gaps = 17/364 (4%)
Query: 26 LQTRARENFF--ENLPDKMR---------GPDTCS--ALLHSYVQNKKSAEAEALMEKMS 72
L T+ + FF N+P +R PD + AL++ + + + +A ++++M
Sbjct: 126 LCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMR 185
Query: 73 ECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKE 131
F + YN M+ S G+LD ++L Q L N P V+TY + + A + +
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A K E+ + PD +Y+T+ K + ++A ++ +E + + ++Y+ LL
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILL 305
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
N G +E ++ KM S N Y+ +I++L + G+ E+A N+ + T
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D + L+AA+ +L++A F +++ G P + + K G+ ++ LE
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
F K +G V P+ ++ L GD A H+++ + + G EI YNS++
Sbjct: 426 FGK-LGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 371 AKAG 374
+ G
Sbjct: 484 CREG 487
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 140/329 (42%), Gaps = 9/329 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
+ H ++ E+ L+E M G+ + ++ + + + K ++++ L+K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV YN + N + A + ++ PD ++Y+ + + A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
L ++ C+ + Y+ L+ G DE L++ +M+S K + Y +I +
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G ++A + E D NILL A +N+ + E E ++ ++ P
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEH 347
T+ +L + G++E+ + K + + PD + + AA+ + +G +D A
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLK--LMKEKGLTPDAYSYDPLIAAFCR---EGRLDVAIE 389
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
L T+ + G + + YN++L T K GK
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGK 418
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
EA LM++M G YN ++ G +D+ +M++ L+ K + PDV++YN+ L
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILL 305
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
A +Q E EK ++ K DP+ ++YS L + + E+A LK M+++
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ +Y L++ + G D + + M+S + Y V+++L K G+ ++A I
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ + + + + N + +A + A +++ GI P T+ + +
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 302 KGQMEKVLE 310
+G +++ E
Sbjct: 486 EGMVDEAFE 494
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKM-SECGFLKCP 80
+ + RA E NL K PD S LL + + K E E LM KM SE KC
Sbjct: 276 EGMVDRAFE-MVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE----KCD 330
Query: 81 ---LPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKA 136
+ Y+ ++ +G++++ +L+ +K K +PD +Y+ +AA + + A +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ PD ++Y+T+ + K ++A ++ + C N +Y+++ S +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G K L + +MMS ++ Y +IS L + G ++A + + S
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
NI+L + +++E A + +V G +P TT+ +L G G + +E
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +L ++ G+ ++ +++ ++ + P+VVTY++ + E A
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K+ + PD SY L + + + + A L+ M C + V Y+++L+ G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D+ L I+ K+ + N + Y + S+L G+ +A ++ E S D N
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+++ ++ A + + P T+ ++ G+ K ++E + + +G+
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F E + PD + +L + +N K+ +A + K+ E G YN M +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S+G + M+ E+ N PD +TYN ++ + + A + ++++ + P +
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + + K E A L+ M CR N Y+ L+ GY+ E + + +
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 211 MSLFA 215
+ + A
Sbjct: 570 VRIDA 574
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 11/332 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ ++ + + EA + +KM E G + YN +LN++ G +K+ +++++K
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ +PD TYN + C + + A + F E+K D ++Y+ L +Y K P+
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L EM + V Y+SL+S Y G DE + + +M K + YT ++
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S + G+ E A +I++E + + N + Y NR + ++ + G+
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P TW L + + G +V FK K G +VP+ + G +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG----FVPERETFNTLISAYSRCGSFEQ 507
Query: 345 AEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
A + + +AG V+ ++ YN++L A+ G
Sbjct: 508 AMTVYRRMLDAG-VTPDLSTYNTVLAALARGG 538
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L ++ PD T ++++ Y + + A+A +++ M E GF YN ++ +
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ + K ++L+E L K PD+++YN + A A + F E++ + I PD
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I+Y+T Y + E+A ++ M K CR N+ Y+S++ Y + KDE
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 123/277 (44%), Gaps = 36/277 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL Y ++ + EA ++ +M GF + YN +++ Y +G LD+ ++ ++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK--------------------- 144
+K T PDV TY L+ E+A F E++
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 145 --------------IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ PD ++++TL +++ + + + + KEM++ R +++L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+S Y+ G ++ + ++++M+ + + Y V+++L + G +E++E + E E
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ LL AY N ++ + S + + I+P
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 20/255 (7%)
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+A F L++ D SY++L S + +A K+ME+ C+ + Y+ +L
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMN------DA-EYTCVISSLVKLGEFEKAENIYDE 244
+++ MG W K+ SL KM DA Y +I+ + ++A +++E
Sbjct: 251 NVFGKMGTP------WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
++ + D N LL Y ++ + A N +V G P T+ L Y + G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG---HVSTE 361
+++ +E + K PD T + E G ++ A + +RNAG ++ T
Sbjct: 365 LDEAMELKNQMAEKGTK--PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT- 421
Query: 362 IYNSLLRTYAKAGKM 376
+N+ ++ Y GK
Sbjct: 422 -FNAFIKMYGNRGKF 435
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLE 139
L Y +L+ Y + ++ + + +E+ P V + C+ + AE+AF E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT---N 196
LK+ PD + +++ S+Y + ++ KA L M++R + Y+SL+ +++ +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G +E+LR ++++ K + Y VI + + A I+ E + D
Sbjct: 680 FGKSEEILR---EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
N + +Y + E A ++ G +P T+ + GY K
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 131/342 (38%), Gaps = 62/342 (18%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + + P+ C+ A + Y K E + ++++ CG + +N +L ++
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
NG +V + +E+K+ P+ T+N ++A + E A + + + PD
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+T+ + + + E++ L EME C+ N + Y SLL Y N K
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN-----------GK 573
Query: 210 MMSLFAKMNDAEYTCVIS-------SLV----KLGEFEKAENIYDEWESISGTGDPRVPN 258
+ L + + Y+ VI +LV K +AE + E + + D N
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633
Query: 259 ILLAAYINRNQLEMAESF---------------YNRL--------------------VTK 283
+++ Y R + A YN L + K
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
GIKP ++ + + Y + +M F + S VPD
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS--GIVPD 733
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 5/196 (2%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
EAE ++ E GF N M+++Y + K +L +K + +P + TYN +
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ D +E+ E+ I PD ISY+T+ Y + A+ EM
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ + Y++ + Y +E + + + M+ + N Y ++ KL ++A+
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 242 YDEWESISGTGDPRVP 257
++ ++ DP P
Sbjct: 792 VEDLRNL----DPHAP 803
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 5/346 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T S L+H Y++N AE L+++M + G + Y +L Y + ++KV +
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + D Y + + +S + E A + ++K PD YS+L S K
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 658
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA L EM K+ N V Y++L+ G ++ +++ N YT +
Sbjct: 659 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 718
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G+ A +Y+E + T D V ++L + LE A + +G
Sbjct: 719 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG- 777
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+++ L G+ K+G+M++ L+ +G R VP+ I + L E G +
Sbjct: 778 HASISSFNNLVDGFCKRGKMQETLKLLHVIMG--RGLVPNALTIENIISGLSEAGKLSEV 835
Query: 346 EHLLVTLRN-AGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQ 390
+ V L+ + ++SL GK+PL +V+ M +D+ +
Sbjct: 836 HTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 881
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 148/368 (40%), Gaps = 42/368 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++H Q+ + +A L+E+M+ G Y +++ Y G + ++ ++
Sbjct: 434 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 493
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N PD+ YN + + E + K F ++++ + P+ +YS L Y+K
Sbjct: 494 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDL 553
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-------------- 211
E A ++ M + N V Y LL Y ++V +K M+
Sbjct: 554 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 613
Query: 212 -----------SLFAKMNDAE----------YTCVISSLVKLGEFEKAENIYDEWESISG 250
+ F ++ E Y+ +IS L K + EKA I DE S G
Sbjct: 614 IHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM-SKKG 672
Query: 251 TGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
DP + N L+ + A + +N ++ KG+ P T+ L G K G +
Sbjct: 673 V-DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 731
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLR 368
+ + + + PD + + GD++ A L+ + GH S +N+L+
Sbjct: 732 FYLYNEMLAT--GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVD 789
Query: 369 TYAKAGKM 376
+ K GKM
Sbjct: 790 GFCKRGKM 797
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 155/350 (44%), Gaps = 10/350 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLN 88
F +++ D PD T AL++ ++++S EA+AL+++MS C LK P + Y ++++
Sbjct: 278 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS-CAELK-PNVVVYANLID 335
Query: 89 LYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
++ G D+ +M++E+ P+ +TY+ + + A ++ + P
Sbjct: 336 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 395
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D I+Y+ + + + + A L EME N YS ++ G ++ +
Sbjct: 396 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 455
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
++M + K N Y +IS + G A I+D+ ++ D N L+
Sbjct: 456 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 515
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
++E + ++ ++ +G+ P T+ L GYLK G +E + ++ + + K P+
Sbjct: 516 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK--PNDV 573
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ + DI+ ++ + G + IY L+ + +G M
Sbjct: 574 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 623
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+ L Y + D ++L E++ + + VTYN+ +A E A +++
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +Y L + K +A L EM + N V Y++L+ + G D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E ++ K+M++ + N Y ++ L K+G+ ++A + + S D N+++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ + + A + + GI P T+ ++ G + G+ EK
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK 450
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 153/379 (40%), Gaps = 29/379 (7%)
Query: 2 ERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKS 61
+ R HG+Q S QR + A + R + L +Y + ++
Sbjct: 200 DERSGHGSQ---HSVLQRAVEGSAARGRH------------------GSALEAYCKVREF 238
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLW 120
A+ ++ +M E G + YN ++ +G +++ ++++ PD TY
Sbjct: 239 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 298
Query: 121 L-AACASQNDKETAEKAFL-ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ C S+ E KA L E+ ++ P+ + Y+ L +++ ++A +KEM
Sbjct: 299 INGLCKSRRSNEA--KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 356
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
+ N++ Y +L+ MG D + K+M+ + + Y +I + + A
Sbjct: 357 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDA 416
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E E+ + + +I++ + E A + TKG+KP + L G
Sbjct: 417 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 476
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV 358
Y ++G + E F K + +PD + L + G ++ + ++ G +
Sbjct: 477 YCREGNVSLACEIFDKM--TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534
Query: 359 STEI-YNSLLRTYAKAGKM 376
E Y+ L+ Y K G +
Sbjct: 535 PNEFTYSGLIHGYLKNGDL 553
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 5/346 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T S L+H Y++N AE L+++M + G + Y +L Y + ++KV +
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + D Y + + +S + E A + ++K PD YS+L S K
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA L EM K+ N V Y++L+ G ++ +++ N YT +
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G+ A +Y+E + T D V ++L + LE A + +G
Sbjct: 741 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG- 799
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+++ L G+ K+G+M++ L+ +G R VP+ I + L E G +
Sbjct: 800 HASISSFNNLVDGFCKRGKMQETLKLLHVIMG--RGLVPNALTIENIISGLSEAGKLSEV 857
Query: 346 EHLLVTLRN-AGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQ 390
+ V L+ + ++SL GK+PL +V+ M +D+ +
Sbjct: 858 HTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 903
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 148/368 (40%), Gaps = 42/368 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++H Q+ + +A L+E+M+ G Y +++ Y G + ++ ++
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N PD+ YN + + E + K F ++++ + P+ +YS L Y+K
Sbjct: 516 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDL 575
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-------------- 211
E A ++ M + N V Y LL Y ++V +K M+
Sbjct: 576 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 635
Query: 212 -----------SLFAKMNDAE----------YTCVISSLVKLGEFEKAENIYDEWESISG 250
+ F ++ E Y+ +IS L K + EKA I DE S G
Sbjct: 636 IHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM-SKKG 694
Query: 251 TGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
DP + N L+ + A + +N ++ KG+ P T+ L G K G +
Sbjct: 695 V-DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLR 368
+ + + + PD + + GD++ A L+ + GH S +N+L+
Sbjct: 754 FYLYNEMLAT--GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVD 811
Query: 369 TYAKAGKM 376
+ K GKM
Sbjct: 812 GFCKRGKM 819
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 155/350 (44%), Gaps = 10/350 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLN 88
F +++ D PD T AL++ ++++S EA+AL+++MS C LK P + Y ++++
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS-CAELK-PNVVVYANLID 357
Query: 89 LYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
++ G D+ +M++E+ P+ +TY+ + + A ++ + P
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D I+Y+ + + + + A L EME N YS ++ G ++ +
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
++M + K N Y +IS + G A I+D+ ++ D N L+
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
++E + ++ ++ +G+ P T+ L GYLK G +E + ++ + + K P+
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK--PNDV 595
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ + DI+ ++ + G + IY L+ + +G M
Sbjct: 596 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 645
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 9/265 (3%)
Query: 48 CSALLHSYVQNKKSAEAEALM----EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
C+ALL ++ A+A AL+ E M G Y+ ++ Y + D ++L
Sbjct: 212 CNALLKDLLR----ADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 267
Query: 104 QELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
E++ + + VTYN+ +A E A +++ + PD +Y L + K
Sbjct: 268 VEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKS 327
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+A L EM + N V Y++L+ + G DE ++ K+M++ + N Y
Sbjct: 328 RRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITY 387
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
++ L K+G+ ++A + + S D N+++ + + + A + +
Sbjct: 388 DNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMEN 447
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEK 307
GI P T+ ++ G + G+ EK
Sbjct: 448 AGISPNVYTYSIMIHGLCQSGEPEK 472
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ + G +DKV ++++E +++ PD+ ++N +AA A E + F +K
Sbjct: 101 YNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMK 160
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD ++Y+TL ++ + + ++A +EM C+ + YS L+S+Y G
Sbjct: 161 AAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVA 220
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L I+ ++ + N YT +IS+ + G E++ + + E+ D + N ++
Sbjct: 221 DALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMI 280
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
AY + A + +RL +G+ P ++ ++ G+L G +++ L +
Sbjct: 281 DAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAY 331
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 9/182 (4%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNL 89
F N+ PD T + L+ + ++ EA + E+M KC Y+ ++++
Sbjct: 156 FSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVN---KCQPDFFVYSLLVSV 212
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + + L+ + P++VTY ++A + E + K F +++ D
Sbjct: 213 YGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRAD 272
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+T+ Y K + AA L + + NR +Y+ ++ + + G+ DE L +
Sbjct: 273 VHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAYA 332
Query: 209 KM 210
M
Sbjct: 333 SM 334
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 98/252 (38%), Gaps = 33/252 (13%)
Query: 96 LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++ ++ Q +K + YN +AA + A + ++ IDPD ++Y L
Sbjct: 12 IEDAEELFQWIKLQDWDKLRPYNAMIAAYYQAKRPKDAWDVYYQMLAEGIDPDDVTYDIL 71
Query: 156 TSLYIKMELP---------------------------------EKAATTLKEMEKRTCRK 182
S K P +K ++EM ++ R
Sbjct: 72 VSGSGKNGYPIDRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRP 131
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ ++++L++ Y + L+++ M + + YT +I + ++A ++
Sbjct: 132 DLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMF 191
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+E D V ++L++ Y + A ++RL +G +P T+ L +L K
Sbjct: 192 EEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHK 251
Query: 303 GQMEKVLECFKK 314
G +E+ + F +
Sbjct: 252 GLLEESRKHFSQ 263
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 148/335 (44%), Gaps = 7/335 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ ++ + + L+E+M+ G + YN ++N + G+ + +L+++
Sbjct: 103 TYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQM 162
Query: 107 KKNTSP-DVVTYNLWLAACASQNDKETAEKAFLEL--KKTKIDPDWISYSTLTSLYIKME 163
N P +++T+ L + + + E A + E+ ++ + PD I+++++ K +
Sbjct: 163 AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQ 222
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
A K +R CR N V YS+L+ + M DE L++ KM+ L + N Y+
Sbjct: 223 RILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYS 282
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
V+ L+K+G E A + + D N L+ + R +L A ++
Sbjct: 283 TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 342
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G P T+ L G + G+ ++ +E + R P+ ++ + L + G +
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM--AARGCAPNAITYSSIVDGLCKAGRVT 400
Query: 344 GAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
A + V+ + Y++L+ KAGK+
Sbjct: 401 EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKI 435
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 11/329 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++ +++K +A L ++M + + Y +++ ++ + + +E + K
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKA 168
P VVTYN + E A + ++ P ++YSTL + +K
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L+EM R C N V Y++L++ G E + ++M + + +I
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K GE E A + DE I P V N +L ++ A + + R + +G +
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P T+ L G K +M++ L+ K + G V + + L + G ++
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT----YSTVVDGLLKVGRMED 296
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
A +L +R+AG + + YN+L+ + K
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFK 325
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 103/236 (43%), Gaps = 14/236 (5%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGF 76
RQR+ +A L E F P + T + L H ++ + EA +++ M+ G
Sbjct: 326 RQRLREAVGLLREMLEAGFH--PSVV----TYTTLCHGLCRSGRFDEAVEILDYMAARGC 379
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN--TSPDVVTYNLWL-AACASQNDKETA 133
+ Y+ +++ G++ + +++ ++ +P V+ Y+ + C + E
Sbjct: 380 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAY 439
Query: 134 EKAFLE--LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
E FLE ++ +I PD +++S L + + + M +R C + V Y++L+
Sbjct: 440 E--FLERMIRAGRI-PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLV 496
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
DE ++++M S + + +I L+++ E A+ I DE S
Sbjct: 497 DRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEENS 552
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 6/344 (1%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P +C+ALLH + + + + M G + YN M++ G L+ +
Sbjct: 220 PRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFT 279
Query: 105 ELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
++K+ +PD+VTYN + + F ++K DPD I+Y+ L + + K E
Sbjct: 280 QMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFE 339
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
KA L EM+ + N V YS+ + + G E ++ + M + N+ YT
Sbjct: 340 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I + K G +A + +E + LL +++ AE + ++
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+ P T+ L G++K +ME + K+ K PD L L + ++
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK--PDLLLYGTILWGLCNESRLE 517
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERM 384
A+ L+ ++ +G + + IY +L+ Y K+G+ L ++E M
Sbjct: 518 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 3/303 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL + + EAE + M G Y +++ +I +++ +L+E+
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K PD++ Y L +++ E A+ E+K++ I+ + + Y+TL Y K
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A T L+EM V Y +L+ G E + + +M + + N A YT +
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K FE A+ ++DE D L+ + L+ A + +R++ G+
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + L WG GQ++K + IG + +PD + K G +D A
Sbjct: 672 ELDLHAYTALIWGLSHSGQVQKARNLLDEMIG--KGVLPDEVVYMCLIKKYYALGKVDEA 729
Query: 346 EHL 348
L
Sbjct: 730 LEL 732
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 130/288 (45%), Gaps = 7/288 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A++L T+ +E F PD + T ++L+ + + E + E+M + +
Sbjct: 274 ARSLFTQMKEAGFT--PDIV----TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 327
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++N + ++ K + L E+K N P+VVTY+ ++ A + + A K F++++
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 387
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + P+ +Y++L K +A ++E+ + + N V Y++LL G
Sbjct: 388 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 447
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E +++ M++ N YT ++ +K E E A++I E + D + +L
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
N ++LE A+ + GI + L Y K GQ + L
Sbjct: 508 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 46/379 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LHSY + K A A+ EKM+E G + YN ML++Y G+ +K+ +L E++
Sbjct: 213 TTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMR 272
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K D T + ++AC + + A++ F+ LK P ++Y+ L ++ K +
Sbjct: 273 SKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYS 332
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + +KEME C + V Y+ L++ Y G+ +E + M K N YT +I
Sbjct: 333 EALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMI 392
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
++ + + +KA ++YD+ + + N +L ++Q E + G
Sbjct: 393 NAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCA 452
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPD----HRLITAA-------- 332
P TW + KG + V F+ K+ G + PD + LITA+
Sbjct: 453 PNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCG----FEPDRDTFNTLITASGRCGSDID 508
Query: 333 -----------------------YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLR 368
N L +GD AE ++ ++N G +E Y+ +L
Sbjct: 509 AEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILN 568
Query: 369 TYAKAGKMPLIIVERMQKD 387
+YAK G + I R++KD
Sbjct: 569 SYAKGGYVKGI--NRIEKD 585
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 10/291 (3%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP- 80
+ L A+E FF L + P T + ALL + + +EA ++M++M + CP
Sbjct: 293 EGLLDEAKE-FFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDN---NCPP 348
Query: 81 --LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAF 137
+ YN ++ Y+ G ++ ++ + +N P+ VTY + A + A +
Sbjct: 349 DAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLY 408
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++K++ P+ +Y+ + + K E+ L +M+ C NR+ ++++LS+ N
Sbjct: 409 DQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNK 468
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G V R++++M S + + + +I++ + G AE IYDE T
Sbjct: 469 GMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATY 528
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
N LL A R AES + KG KP T++ L+ Y K G ++ +
Sbjct: 529 NALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGI 579
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 113/273 (41%), Gaps = 5/273 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD+ DT + L+ + + +AE + ++M E GF YN +LN G
Sbjct: 488 PDR----DTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRT 543
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+++++K K P +Y+L L + A + + ++ I P W+ TL
Sbjct: 544 AESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLIL 603
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K + ++K + + V ++S+LS+++ D I + +
Sbjct: 604 ANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQP 663
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y ++ + GE KAE I E ++ D N ++ + + + A
Sbjct: 664 DLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTL 723
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ ++++GI+PC T+ GY KG ++ E
Sbjct: 724 SEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDE 756
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ML+++ D+ +++ +++ PD+VTYN + A + AE+ EL+
Sbjct: 633 FNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQ 692
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ D ISY+T+ + + L +A TL EM R R V Y++ + Y G
Sbjct: 693 NSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFA 752
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
E+ + M + N+ Y V+ K +F++A + I + D
Sbjct: 753 EIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITDIDDSFD 804
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 148/375 (39%), Gaps = 42/375 (11%)
Query: 7 HGAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAE 63
+G + A +Y + A +A Q + ++ + + P+ C+ A+L + +S E
Sbjct: 379 NGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEE 438
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLA 122
++ M G + +N ML++ + G V ++ QE+K PD T+N +
Sbjct: 439 MMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLIT 498
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
A AEK + E+ + P +Y+ L + + A + +K+M+ + +
Sbjct: 499 ASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKP 558
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ +YS +L+ Y GY + RI K + + +I + K E +
Sbjct: 559 SETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAF 618
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ D V N +L+ + +N + A + + G++P T+ L Y +
Sbjct: 619 QALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARG 678
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
G EC+K AE +L L+N+G S I
Sbjct: 679 G------ECWK-------------------------------AEEILRELQNSGDKSDLI 701
Query: 363 -YNSLLRTYAKAGKM 376
YN++++ + + G M
Sbjct: 702 SYNTVIKGFCRQGLM 716
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 95/231 (41%), Gaps = 36/231 (15%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM---- 102
T +ALL++ + AE++++ M GF Y+ +LN Y G + + ++
Sbjct: 527 TYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDI 586
Query: 103 -------------------------------LQELKKNT-SPDVVTYNLWLAACASQNDK 130
Q L+K+ PD+V +N L+ + +N
Sbjct: 587 YDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMH 646
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A + +++ + PD ++Y++L LY + KA L+E++ + + ++Y+++
Sbjct: 647 DRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTV 706
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ + G E LR +M+S + Y + G F + + +
Sbjct: 707 IKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEV 757
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 48/209 (22%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y+T+ Y + E+A ++M + V Y+ +L +Y MG R W
Sbjct: 208 DVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMG------RSW 261
Query: 208 KKMMSLFAKMNDA-----EYTC--VISS-------------------------------- 228
K++ L +M E+TC VIS+
Sbjct: 262 NKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNAL 321
Query: 229 ---LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
K G + +A +I E E + D N L+AAY+ E + + + GI
Sbjct: 322 LQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGI 381
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KP T+ + Y + Q++K L + +
Sbjct: 382 KPNAVTYTTMINAYGRAAQVDKALSLYDQ 410
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 160/359 (44%), Gaps = 11/359 (3%)
Query: 26 LQTRARENFFENLPDKMRGPD--TCSALLHSYV-QNKKSAEAEALMEKMSECGFLKCPLP 82
L ++A E E K PD T S +++ + Q + E L E ++ G +
Sbjct: 56 LTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVT 115
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLE-L 140
Y +++ +G++D+ +M++E+K K PD T++ + + + A K + E L
Sbjct: 116 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ PD ++Y+ L + K EKA L ME R C N V YSSLL G
Sbjct: 176 TSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 235
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D+ L ++++M S N YT +I L + + A + DE + D N L
Sbjct: 236 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNAL 295
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLECFKKAIG 317
L Y ++E A+ + + TK P T+ L G+ ++E+ +LE K A G
Sbjct: 296 LDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 355
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ V + ++ A Y++ + ++ AE + + + Y+SL+ KAG++
Sbjct: 356 -IDPDVVTYSIVVAGYSRAKRF--VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 47/289 (16%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHML 87
+ F + K P+ T + L+H K A LM++M+ CP + YN +L
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA---TCCPPDTVSYNALL 296
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-- 144
+ Y G++++ Q+ +E+ K+ PD +TY + + + E A + LE KT
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAG 355
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
IDPD ++YS + + Y + + +AA ++EM R N V YSSL+ G D +
Sbjct: 356 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAM 415
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+ K M++ + + + VI +L +LG+ ++A W+ LL A
Sbjct: 416 EVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA------WK-------------LLVA- 455
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ G++P T+ L G+ + G+ME E F+
Sbjct: 456 ---------------MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDG 344
+P TW ++ G+ K Q+++ L CF+K +R++V P+ R N L +
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEK----MREFVAPNERTYNVVVNGLCKARLTSK 59
Query: 345 AEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKMPL---IIVERMQKDNVQMDAET 395
A +L +R+ V+ ++ Y++++ + K G+M I+ E + +D + D T
Sbjct: 60 AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVT 115
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 6/344 (1%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P +C+ALLH + + + + M G + YN M++ G L+ +
Sbjct: 21 PRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFT 80
Query: 105 ELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
++K+ +PD+VTYN + + F ++K DPD I+Y+ L + + K E
Sbjct: 81 QMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFE 140
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
KA L EM+ + N V YS+ + + G E ++ + M + N+ YT
Sbjct: 141 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 200
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I + K G +A + +E + LL +++ AE + ++
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 260
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+ P T+ L G++K +ME + K+ K PD L L + ++
Sbjct: 261 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK--PDLLLYGTILWGLCNESRLE 318
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERM 384
A+ L+ ++ +G + + IY +L+ Y K+G+ L ++E M
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 362
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 130/288 (45%), Gaps = 7/288 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A++L T+ +E F PD + T ++L+ + + E + E+M + +
Sbjct: 75 ARSLFTQMKEAGFT--PDIV----TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 128
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++N + ++ K + L E+K N P+VVTY+ ++ A + + A K F++++
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 188
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + P+ +Y++L K +A ++E+ + + N V Y++LL G
Sbjct: 189 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 248
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E +++ M++ N YT ++ +K E E A++I E + D + +L
Sbjct: 249 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 308
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
N ++LE A+ + GI + L Y K GQ + L
Sbjct: 309 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 15/314 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ + + AEA L+E++ + G + Y +L+ G++ + ++ +
Sbjct: 198 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 257
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L +P+ TY + + E A+ E+K+ I PD + Y T+
Sbjct: 258 LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRL 317
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A + E+++ N V Y++L+ Y G E L + ++M+ L
Sbjct: 318 EEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL------------ 365
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K FE A+ ++DE D L+ + L+ A + +R++ G+
Sbjct: 366 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 425
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + L WG GQ++K + IG + +PD + K G +D A
Sbjct: 426 ELDLHAYTALIWGLSHSGQVQKARNLLDEMIG--KGVLPDEVVYMCLIKKYYALGKVDEA 483
Query: 346 EHLLVTLRNAGHVS 359
L + G ++
Sbjct: 484 LELQNEMAKRGMIT 497
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 156/394 (39%), Gaps = 45/394 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDKVPQM 102
T + ++HSY + + E + ++ +M + +C P +N M++ G ++ +
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEK----RCVFPDVVTHNVMVDARFRAGDVEAAMAL 216
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + K P +VTYN L + A + F + + PD S++ L + +
Sbjct: 217 IDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCR 276
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+A KEM R + V++S L+ L+T G D ++M +
Sbjct: 277 AGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVI 336
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT VI + G +A + DE + D N LL +L AE N +
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLE------------------------CFKKAIG 317
+G+ P T+ L GY + G +EK L+ C + +G
Sbjct: 397 ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456
Query: 318 SV---------RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
R+ P+H + + E+G +D A L + N G V + YNS++
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
Query: 368 RTYAKAGKMP--LIIVERMQKDNVQMDAETQKVL 399
+ Y ++G + + +M+ D V D T L
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTL 550
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 157/375 (41%), Gaps = 41/375 (10%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLA 122
A AL++ M G + YN +L + NG+ DK ++ + + +PDV ++N+ +
Sbjct: 213 AMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIG 272
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ E A + + E++ ++ PD +S+S L L+ + + AA L+EM +
Sbjct: 273 GFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMP 332
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ V Y+ ++ + G E LR+ +M++ + Y +++ L K AE +
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+E + D L+ Y +E A F++ + + ++P T+ L G ++
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
G + K E + R+ P+H + + E+G +D A L + N G V +
Sbjct: 453 GDLGKANELWDDM--HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIM 510
Query: 363 ------------------------------------YNSLLRTYAKAGKM--PLIIVERM 384
YN+L+ Y K GKM +++ M
Sbjct: 511 TYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIM 570
Query: 385 QKDNVQMDAETQKVL 399
+ +NVQ DA T ++
Sbjct: 571 ENENVQPDAVTYNMI 585
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 3/283 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F++ + + PD S L+ + + + A + +M E G + + Y ++ +
Sbjct: 286 FYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFC 345
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + ++ E+ PDVVTYN L + AE+ E+K+ + PD
Sbjct: 346 RAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLC 405
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++TL Y + EKA + + R + V Y++L+ G + +W M
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S N Y+ +I S + G+ + A DE + + N ++ Y +
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ F ++ + P T+ L GY+K+G+M + K
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF+ + D+ PD T + L+ + +A L + M + Y+ +++ +
Sbjct: 426 FFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC 485
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
GQ+D L E+ K P+++TYN + + ++ +++ K+ PD I
Sbjct: 486 EKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLI 545
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL Y+K +A LK ME + + V Y+ ++S ++ G E ++KKM
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKM 605
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ + + Y +I+ V G +K+ ++DE
Sbjct: 606 GARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDE 639
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 104/264 (39%), Gaps = 3/264 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
EA + ++M G L + YN +LN +L ++L E+K + PD+ T+ +
Sbjct: 352 EALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLI 411
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ E A + F + ++ PD ++Y+TL + KA +M R
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIF 471
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N V YS L+ + G D +M++ N Y +I + G K +
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ D N L+ Y+ ++ A + + + ++P T+ ++ G+
Sbjct: 532 LPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSV 591
Query: 302 KGQMEKVLECFKKAIGSVRKWVPD 325
G M++ +KK R PD
Sbjct: 592 HGNMQEADWVYKKM--GARGIEPD 613
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/273 (17%), Positives = 109/273 (39%), Gaps = 5/273 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L N+ + T N+ + + + E++K + PD ++++ + +
Sbjct: 151 LSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDV 210
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + M + + V Y+S+L G D+ +++ M + + + +
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNML 270
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + GE E+A Y E T D + L+ + R +++ A + + G+
Sbjct: 271 IGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGL 330
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + ++ G+ + G M + L + + +PD N L ++ + A
Sbjct: 331 MPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAF--GCLPDVVTYNTLLNGLCKERRLSDA 388
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
E LL ++ G V ++ + +L+ Y + G +
Sbjct: 389 EELLNEMKERG-VPPDLCTFTTLIHGYCRDGNI 420
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ S+ + + A A +++M G + + YN ++ Y +G + K Q L ++
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + PD++TYN + + A ++ + PD ++Y+ + S +
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNM 595
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++A K+M R +R Y S+++ + G + ++ +M+
Sbjct: 596 QEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEML 641
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 170/411 (41%), Gaps = 58/411 (14%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQEL 106
LL + + K++ EA + L+ + E G + Y+ +L +GQ D + +M+ E
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SPDVV YN + + D A F E+ + I PD+++YS++ K +
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA L++M + N Y++L+ Y++ G E +R++K+M + + ++
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331
Query: 227 SSLVKLGEFEKAENIYDEWE-------------SISG-----------------TGDPRV 256
SL K G+ ++A +++D ++G GD
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 257 P-----NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
P N+L+ AY N L+ A +N + G+KP T+ + + G+M+ +E
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
F + I + PD G + A+ L+ + N G H+ +++S++
Sbjct: 452 FNQMID--QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509
Query: 371 AKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEM 405
K G++ P +V M D + + +K L++ M
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 132/280 (47%), Gaps = 5/280 (1%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T + L+ S + K EA + + M+ G YN MLN Y + G L
Sbjct: 321 LPDVV----TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376
Query: 98 KVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ + L +P + T+N+ + A A+ + A F E++ + P+ ++Y+T+
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ ++ + A +M + ++ AY L+ + G + + ++M+
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ ++ +I++L KLG A+NI+D ++ V ++L+ Y ++E A
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ +V+ GI+P + L GY K G++++ L F++ +
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 145/344 (42%), Gaps = 10/344 (2%)
Query: 5 RPHGAQVRAQSYRQRVAQAQAL--QTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKK 60
R HG + +Y +A + A E F + D+ PD + L+ + +
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF-NQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS--PDVVTYN 118
+A+ L+ ++ G + ++ ++N G++ Q + +L N P V Y+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDA-QNIFDLTVNVGLHPTAVVYS 538
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + E A + F + I+P+ + Y TL + Y K+ ++ + +EM ++
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
+ + + Y+ ++ G + +M MN Y+ V+ L K F++A
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 658
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
++ E +++ D N ++A ++E A+ + + G+ PC T+ ++
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+K+G +E+ + F + PD RL+ +L ++ +I
Sbjct: 719 LIKEGLVEEAEDMFSSMQNA--GCEPDSRLLNHVVRELLKKNEI 760
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +L+ GQ+D Q++ E+ +K+ P+VVTY+ + A + A F E+K
Sbjct: 215 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 274
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
I D +SY+TL S+Y K+ E+A KEME +K+ V Y++LL Y G +
Sbjct: 275 FASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYE 334
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
EV R++++M + N Y+ +I K G +++A ++ E++ D + + L+
Sbjct: 335 EVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALI 394
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
A +E A SF + + +GI+P T+ + + + G +E E
Sbjct: 395 DALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATE 443
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 112 PDVVTYNLWLAACASQN-DKETAEKAFLELK------KTKIDPDWISYSTLTSLYIKMEL 164
P++VTYN + AC D A + F E+ I+ D +Y+TL K
Sbjct: 168 PNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQ 227
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ A + EM ++ N V YS+++ Y G DE L ++ +M ++ Y
Sbjct: 228 MDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNT 287
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S KLG FE+A N+ E ES D N LL Y + + E + + + +
Sbjct: 288 LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER 347
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I P T+ L Y K G ++ +E F++ + K D L +A + L + G ++
Sbjct: 348 IFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLK--ADVVLYSALIDALCKNGLVES 405
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITS 403
A L + G + YNS++ + ++G IVE + V D E +++KI
Sbjct: 406 AVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG-----IVEDATESEVG-DKEDNQIIKIFG 459
Query: 404 EM 405
++
Sbjct: 460 QL 461
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + G D S LL Y + + EA + ++M G K + YN +L Y
Sbjct: 268 NLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGY 327
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G+ ++V ++ +E+K + P+++TY+ + + + A + F E KK + D
Sbjct: 328 GKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADV 387
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+ YS L K L E A + L EM K R N V Y+S++ + G
Sbjct: 388 VLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 436
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 190/410 (46%), Gaps = 41/410 (10%)
Query: 28 TRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
TRARE F+NLP + + + LL YV++ +A+AE++ + G L+ P N ML
Sbjct: 144 TRARE-MFDNLPADWKSREGYTVLLSMYVRHSMAADAESIYTTLKRWG-LRSISPINMML 201
Query: 88 NLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
LY + KV +++++ ++ S ++ ++N+ L E + +E+ ++K
Sbjct: 202 TLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEME-SLVEMMESKNF 260
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEK--RTCRKNRV--AYSSLLSLYTNMGYKDE 202
D +Y L S Y + + +KA L +E T + NR+ Y+ ++ +Y +G +
Sbjct: 261 LDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEG 320
Query: 203 VLRIWKKMMSLFAKMNDA--EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
V RIW + ++M+ +Y C+I S K+G FE+AE+ + + V N++
Sbjct: 321 VKRIW----DITSRMDPTAEDYICMIRSSAKVGLFEQAESGFLALAA-QRKMHITVCNVM 375
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF-------- 312
L N + AES ++ G KP T+ L +LK +++ L+ F
Sbjct: 376 LQVCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLFQLERQVFR 435
Query: 313 ---------KKAIGS-----VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGH 357
+K + + ++ WV R++ A L E+G++ E L R
Sbjct: 436 VPFELSPQERKFMSTEPRKDIKPWVGTCRMMMLA---LAERGEVVACETLFRNWRLEKWK 492
Query: 358 VSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPV 407
++N+LLR Y A + +ER++ D V+ D ET +L E P+
Sbjct: 493 TDVRLFNALLRAYEVAREPVAGFMERLEADGVEADEETIGILSRLPERPL 542
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 154/332 (46%), Gaps = 8/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
++L+ ++V+ + +A A+ M + G +N ++N + ++D V ++ +E++
Sbjct: 93 NSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQN 152
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+N SP+V+TY++ + A E A K FL++K P+ +Y+++ K +K
Sbjct: 153 QNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDK 212
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM RV Y+SL+ G D +++++M+S + + +T ++
Sbjct: 213 AFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVY 272
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L G +A I+ E + D + N+L+ +L+ A + L G+ P
Sbjct: 273 GLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVP 332
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGA 345
T+ L G K G++ +G +++ PD + + L + G ++ A
Sbjct: 333 DVYTFNALMDGLCKSGRIHDAF----ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA 388
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
LL+ +++ G+ + YN+L+ K G++
Sbjct: 389 GQLLLEMQSLGYEPDVVTYNTLIDESCKGGRI 420
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 135/332 (40%), Gaps = 35/332 (10%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFL 138
P + + Y S G L+K + L+ ++ + + YN + A + A +
Sbjct: 54 PRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYR 113
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+ ++ + PD +++ L + + K + + +EM+ + C N + YS L+ G
Sbjct: 114 VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCG 173
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
++ L+++ M S + N YT +I L K G +KA +++E S V N
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA--I 316
L+ + + A + +++KG++P + T+ L +G G+ + F++A +
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293
Query: 317 GSV--------------------RKW-----------VPDHRLITAAYNKLEEQGDIDGA 345
G W VPD A + L + G I A
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
LL ++ AG +YN+L+ K+G++
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRV 385
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ + ++K+ EA + ++ E G + +N +++ +G++ +L ++K+
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKR 362
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+PDV YN + E A + LE++ +PD ++Y+TL K E
Sbjct: 363 AGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIED 422
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
A +E+ + N V Y+++L+ G DE +++ M
Sbjct: 423 ALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGM 464
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + L+ ++ + EA L+ +M G+ + YN +++ G+++ ++
Sbjct: 367 PDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRL 426
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK----IDPDWISYSTL 155
+E+ + VTYN L + A K F +K+ IDPD+++Y+TL
Sbjct: 427 FEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTL 483
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 160/355 (45%), Gaps = 5/355 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SAL+ +Y ++ EA + + M G + + YN +++ G + KV ++ +
Sbjct: 229 SALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGML 288
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
N PD +T+N LA C+ E A + F + ID D +Y+TL K +
Sbjct: 289 SNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMD 348
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A + EM + N V YS+++ Y +G D+ L ++ +M L ++ Y ++
Sbjct: 349 LAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLL 408
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S KLG FE+A ++ E E+ D N LLA Y + + + + + +
Sbjct: 409 SVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVS 468
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L Y K G ++ +E F++ + K D L +A + L + G ++ +
Sbjct: 469 PNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLK--ADVVLYSALIDALCKNGLVESSV 526
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLK 400
LL + G + YNS++ + ++ ++ + + +Q+++ + V++
Sbjct: 527 TLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQ 581
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 118/283 (41%), Gaps = 36/283 (12%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A F + DK D T + LL + + + A +M +M L + Y+ M+
Sbjct: 314 AARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMI 373
Query: 88 NLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
+ Y G+LD M E+K FL +
Sbjct: 374 DGYAKVGRLDDALNMFNEMK-----------------------------FL-----GVGL 399
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +SY+TL S+Y K+ E+A KEME RK+ V Y++LL+ Y DEV R++
Sbjct: 400 DRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVF 459
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
++M N Y+ +I K G +++A ++ E++ D + + L+ A
Sbjct: 460 EEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKN 519
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+E + + + + +GI+P T+ + + + + V++
Sbjct: 520 GLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVD 562
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 153 STLTSLYIKMELPEKA-ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
STL L K+EL + T LKE +T A+S+L+S Y GY +E ++++ M
Sbjct: 198 STLGRLG-KVELAKAVFDTALKEGYGKTV----YAFSALISAYGRSGYCNEAIKVFDSMK 252
Query: 212 SLFAKMNDAEYTCVISSLVKLG-EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S N Y VI + K G EF+K I+D S D N LLA
Sbjct: 253 SNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLW 312
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
E A ++ +V KGI T+ L K GQM+ E + + +P+ +
Sbjct: 313 EAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEM--PTKNILPNVVTYS 370
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
+ + G +D A ++ ++ G + YN+LL YAK G+ L + + M+
Sbjct: 371 TMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENA 430
Query: 388 NVQMDAETQKVL 399
++ D T L
Sbjct: 431 GIRKDVVTYNAL 442
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 189/410 (46%), Gaps = 41/410 (10%)
Query: 28 TRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
TRARE F+NLP + + + LL YV++ +A+AE++ + G L+ P N ML
Sbjct: 144 TRARE-MFDNLPADWKSREAYTVLLSMYVRHSMAADAESIYTTLKRWG-LRSISPINMML 201
Query: 88 NLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
LY + KV +++++ ++ S ++ ++N+ L E + +E+ ++K
Sbjct: 202 TLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEME-SLVEMMESKNF 260
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEK--RTCRKNRV--AYSSLLSLYTNMGYKDE 202
D +Y L S Y + + +KA L +E T + NR+ Y+ ++ +Y +G +
Sbjct: 261 LDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEG 320
Query: 203 VLRIWKKMMSLFAKMNDA--EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
V RIW + ++M+ +Y C+I S K+G FE AE+ + + V N++
Sbjct: 321 VKRIW----DITSRMDPTAEDYICMIRSSAKVGLFELAESGFLALAA-QRKMHITVCNVM 375
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF-------- 312
L N + AES ++ G KP T+ L +LK +++ L+ F
Sbjct: 376 LQVCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLFQLERQVFR 435
Query: 313 ---------KKAIGS-----VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGH 357
+K + + ++ WV R++ A L E+G++ E L R
Sbjct: 436 VPFELSPQERKFMSTEPRKDIKPWVGTCRMVMLA---LAERGEVVACETLFRNWRLEKWK 492
Query: 358 VSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPV 407
++N+LLR Y A + +ER++ D V+ D ET +L E P+
Sbjct: 493 TDVRLFNALLRAYEVAREPVAGFMERLEADGVEADEETIAILSRLPERPL 542
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 16/299 (5%)
Query: 96 LDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
LD+ Q+ QEL +KNT +YN+ L A + + A + F E+ PD ++Y
Sbjct: 238 LDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
+ Y + E A L EM R N VAY+S+++L + G + +R+ + M+
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
++ A +T V+S + G+ A N +DE + D L+ +L+ AE
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
+ KG+ T+ +L GY K G+M + K + ++ P+ TA +
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ--KRVTPNVVTYTALSD 468
Query: 335 KLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMD 392
L +QGD+ A LL + + G ++ YNSL+ KAG + E+ + + MD
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL-----EQAMRTMIDMD 522
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 124/322 (38%), Gaps = 39/322 (12%)
Query: 24 QALQTRARENFFENLPDKMRGPD---TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+AL T R L D+M P T ++H Y + A L+ +M+ G P
Sbjct: 261 KALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y ++ L GQ+ ++++++ D + ++ + D A F E
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++K + D ++Y+ L + + ++A L+EME + + V Y+ L+ Y +G
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 200 KDEVLRIWKKMM-----------------------------------SLFAKMNDAEYTC 224
E + KM+ S ++N Y
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I+ L K G E+A + + D ++ A +L+ A S ++ KG
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 285 IKPCYTTWELLTWGYLKKGQME 306
IKP T+ +L G+ G++E
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVE 582
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 109/266 (40%), Gaps = 1/266 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ ++ + + A A ++M + G + Y ++N G+L + ++LQE++
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K D VTY + + A ++ + ++ P+ ++Y+ L+ K
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + N Y+SL++ G ++ +R M K + YT +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L + E ++A ++ E N+L+ + ++E + ++ K I P
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFK 313
TT+ L Y + M+ E +K
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYK 624
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 3/237 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L++ + +A M M E G Y ++ + +LD+ +LQE
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P +VTYN+ + E ++ + + I P+ +Y++L Y +E
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC-IEKN 615
Query: 166 EKAATTL-KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
K+ T + K M + N Y+ L+ + E L +M+ ++ + Y
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+I L K +F +A ++++ T +P V N + N + LE + + LV
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/294 (18%), Positives = 119/294 (40%), Gaps = 3/294 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A + + E + + DK D T + L+ Y + K EA + KM + +
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 82 PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
Y + + G + ++L E+ K ++ TYN + + E A + +++
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ + PD +Y+T+ + + ++A + L+EM + + V Y+ L++ + G
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+ R+ + M+ N Y ++ + IY S + NIL
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ + ++ A F++ ++ KG + +++ L KK + + F+K
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEK 695
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 140/284 (49%), Gaps = 10/284 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-- 106
+A++ Y ++ K ++A+ L++ M + G + + +N ++N + +G L P ++ EL
Sbjct: 229 NAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGL--TPNLVVELLD 286
Query: 107 ---KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
PD +TYN L+AC+ ++ E A K F +++ + PD +Y+ + S+Y +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
L +A E+E + + V Y+SLL + ++V ++++M + ++ Y
Sbjct: 347 LAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I K G+ + A +Y + + +SG D +L+ + N+ A + + ++
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLD 466
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
GIKP T+ L GY K G+ E+ + F + S K PD+
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTK--PDN 508
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 4/234 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L K PD T ++LL+++ + + + + + + ++M + GF K + YN ++++
Sbjct: 352 ERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 90 YISNGQLDKVPQMLQELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y GQLD Q+ +++K +PD +TY + + + N A E+ I P
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKP 471
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+YS L Y K E+A T M + + + +AYS +L + + ++
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLY 531
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ M+S + + Y +I L+K + + + E + G + ++L+
Sbjct: 532 RDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNPLEISSVLV 585
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 144/345 (41%), Gaps = 44/345 (12%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE++ PD T +A++ Y + +AEAE L ++ GF + YN +L +
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFAR 379
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDWI 150
+KV ++ Q+++K D +TYN + Q + A + + ++K + +PD I
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAI 439
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K +AA + EM + YS+L+ Y G ++E + M
Sbjct: 440 TYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K ++ Y+ ++ L++ E KA W
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKA------W------------------------- 528
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
Y +++ G P ++ +EL+ G +K+ + + V +K I + + + L
Sbjct: 529 ----VLYRDMISDGHTPSHSLYELMILGLMKENRSDDV----QKTIRDMEELCGMNPLEI 580
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
++ E D+ A L V + N + + S+L +Y+ +G+
Sbjct: 581 SSVLVKGECFDL-AARQLKVAITNGYELENDTLLSILGSYSSSGR 624
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 6/266 (2%)
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME--LPEKAATT 171
V YN + + A++ +++ PD IS++TL + +K P
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVEL 284
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L + R + + Y++LLS + + +++++ M + + + Y +IS +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G +AE ++ E E + D N LL A+ E + Y ++ G T
Sbjct: 345 CGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + Y K+GQ++ L+ +K G S R PD T + L + A L+
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRSVEAAALMS 462
Query: 351 TLRNAGHVST-EIYNSLLRTYAKAGK 375
+ + G T + Y++L+ YAKAGK
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGK 488
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 122/285 (42%), Gaps = 11/285 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+L ++ + E + M G+L Y M+ L ++ M+ E+++ N
Sbjct: 863 MLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
++ +N L D + + + +K++ ++PD +Y+TL +Y + PE+
Sbjct: 923 FKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ +++M Y SL+S + ++ +++++++S K++ + Y ++
Sbjct: 983 SLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G KAE + ++ ++L+ +Y + + AE + L ++
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTT 1102
Query: 290 TTWELLTWGYLK----KGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ + YL+ K +E++LE K+ + PDHR+ T
Sbjct: 1103 LPYSSVIDAYLRSKDYKSGIERLLEMKKEGLE------PDHRIWT 1141
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 154/355 (43%), Gaps = 24/355 (6%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ NL R PD T ++L+ +Y + A A+ M G N +L+
Sbjct: 772 ESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHA 831
Query: 90 YISNGQLDKVPQMLQELK----KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+G+L+++ +++EL+ K + ++ L L A A + K + +K
Sbjct: 832 LCVDGRLEELYVVVEELQDMGFKISKSSIL---LMLDAFARAGNIFEVNKIYSSMKAAGY 888
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P Y + L K + A + EME+ + ++S+L +YT + + ++
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQ 948
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNI--LLA 262
+++++ + ++ Y +I + + E Y + + G DP++ L++
Sbjct: 949 VYQRIKESGLEPDETTYNTLI---IMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 263 AYINRNQLEMAESFYNRLVTKGIK---PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
A+ + LE AE + L++KG+K Y T ++ + EK+L+ K A +
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA--GI 1063
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
+ L+ +Y+ G+ AE +L L+N ++T Y+S++ Y ++
Sbjct: 1064 EPTLATMHLLMVSYSS---SGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRS 1115
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT +L+ ++ + K +AE L E++ G Y+ M+ + +G K ++LQ
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K P + T +L + + +S + + AEK LK T+++ + YS++ Y++ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKD 1117
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
+ L EM+K + ++ + + K EV+ + K + +
Sbjct: 1118 YKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDI 1166
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 152/376 (40%), Gaps = 35/376 (9%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT ++L SY + + +EA L+E + E L ++ L+ +++ + L E
Sbjct: 610 DTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLINEALIVLHC---KVNNIGAALDE 666
Query: 106 LKKNTSPDV--------VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ P V Y L C + A + F EL+ + +P ++
Sbjct: 667 YLAD--PCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVV 724
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+Y K+ PE A + + E + + + +YT++ L++W+K S+ +
Sbjct: 725 VYCKLGFPETAYQVVNQAETKG------FHFACSPMYTDIIEAYGKLKLWQKAESVVGNL 778
Query: 218 NDAEYT-------CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ T ++S+ + G +E+A I++ + N LL A +L
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRL 838
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRL 328
E L G K ++ L+ + + G + +V + + KA G ++P RL
Sbjct: 839 EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAG----YLPTIRL 894
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYA--KAGKMPLIIVERMQ 385
L + + AE ++ + A V I+NS+L+ Y + K + + +R++
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIK 954
Query: 386 KDNVQMDAETQKVLKI 401
+ ++ D T L I
Sbjct: 955 ESGLEPDETTYNTLII 970
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 16/299 (5%)
Query: 96 LDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
LD+ Q+ QEL +KNT +YN+ L A + + A + F E+ PD ++Y
Sbjct: 238 LDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
+ Y + E A L EM R N VAY+S+++L + G + +R+ + M+
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
++ A +T V+S + G+ A N +DE + D L+ +L+ AE
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
+ KG+ T+ +L GY K G+M + K + ++ P+ TA +
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ--KRVTPNVVTYTALSD 468
Query: 335 KLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMD 392
L +QGD+ A LL + + G ++ YNSL+ KAG + E+ + + MD
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL-----EQAMRTMIDMD 522
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 124/322 (38%), Gaps = 39/322 (12%)
Query: 24 QALQTRARENFFENLPDKMRGPD---TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+AL T R L D+M P T ++H Y + A L+ +M+ G P
Sbjct: 261 KALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y ++ L GQ+ ++++++ D + ++ + D A F E
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++K + D ++Y+ L + + ++A L+EME + + V Y+ L+ Y +G
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 200 KDEVLRIWKKMM-----------------------------------SLFAKMNDAEYTC 224
E + KM+ S ++N Y
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I+ L K G E+A + + D ++ A +L+ A S ++ KG
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 285 IKPCYTTWELLTWGYLKKGQME 306
IKP T+ +L G+ G++E
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVE 582
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 109/266 (40%), Gaps = 1/266 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ ++ + + A A ++M + G + Y ++N G+L + ++LQE++
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K D VTY + + A ++ + ++ P+ ++Y+ L+ K
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + N Y+SL++ G ++ +R M K + YT +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L + E ++A ++ E N+L+ + ++E + ++ K I P
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFK 313
TT+ L Y + M+ E +K
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYK 624
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 3/237 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L++ + +A M M E G Y ++ + +LD+ +LQE
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P +VTYN+ + E ++ + + I P+ +Y++L Y +E
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC-IEKN 615
Query: 166 EKAATTL-KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
K+ T + K M + N Y+ L+ + E L +M+ ++ + Y
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+I L K +F +A ++++ T +P V N + N + LE + + LV
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/294 (18%), Positives = 119/294 (40%), Gaps = 3/294 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A + + E + + DK D T + L+ Y + K EA + KM + +
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 82 PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
Y + + G + ++L E+ K ++ TYN + + E A + +++
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ + PD +Y+T+ + + ++A + L+EM + + V Y+ L++ + G
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+ R+ + M+ N Y ++ + IY S + NIL
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ + ++ A F++ ++ KG + +++ L KK + + F+K
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEK 695
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 167/361 (46%), Gaps = 8/361 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD T ++LL+ + + ++A +L+ +M E G+ +N +++ L+ N + V
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + + K PD+VTY + + + D + A ++++ KI+P + Y+T+
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A EM+ + R N V Y+SL+ N G + R+ M+ N
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++ +I + VK G+ +AE +YDE S D + L+ + ++L+ A+ + ++
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K P T+ L G+ K ++++ +E F++ S R V + T + + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARE 446
Query: 342 IDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKV 398
D A+ + + + G + Y+ LL GK+ L++ E +Q+ ++ D T +
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 399 L 399
+
Sbjct: 507 M 507
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 147/328 (44%), Gaps = 4/328 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ ++ + K +A L +M G + YN ++ + G+ ++L + ++
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +P+VVT++ + A + AEK + E+ K IDPD +YS+L + + + ++
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M + C N V Y++L+ + DE + ++++M N YT +I
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ E + A+ ++ + S D +ILL N ++E A + L ++P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ ++ G K G++E + F S++ P+ T + +G + A+
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSL--SLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 348 LLVTLRNAGHV-STEIYNSLLRTYAKAG 374
L ++ G + + YN+L+R + + G
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 4/330 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S LL + + K +L E+M G Y+ ++N + QL +L ++ K
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMK 144
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PD+VT N L N A ++ + PD +++TL + +
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASE 204
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M + C+ + V Y +++ G D L + KKM + Y +I
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L A N++ E ++ + N L+ N + A + ++ + I P
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L ++K+G++ + + + + I R PD ++ N +D A+H
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 348 LL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ + + + YN+L++ + KA ++
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + K+ E L +MS+ G + + Y +++ + + D + +++
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
PD++TY++ L + ETA F L+++K++PD +Y+ + K
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E + + + N V Y++++S + G K+E ++++M + Y +
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNILLAAYINRNQLEM 272
I + ++ G+ + + E S GD V N+L ++++ L+M
Sbjct: 578 IRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKM 628
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 5/247 (2%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A F ++ K++ P + +S L S KM + + ++M+ N YS L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ + L + KMM L + + +++ A ++ + +
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D N L+ N+ A + +R+V KG +P T+ ++ G K+G ++ L
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 311 CFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
KK G + V + I A L +++ A +L + N G + YNSL+R
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDA---LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 369 TYAKAGK 375
G+
Sbjct: 300 CLCNYGR 306
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 169/370 (45%), Gaps = 19/370 (5%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALM 68
+R + R+A+A AL D GPD +AL+ ++ + + +A A+
Sbjct: 148 IRVMARAGRLAEASALL------------DAAPGPDAGAYTALVSAFSRAGRFRDAVAVF 195
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
+M + G + YN +L++Y +V +++ +K++ +PD TYN ++ C
Sbjct: 196 RRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRR 255
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ + A + F E+K + +PD +++++L +Y K ++A ++EME+ C + V
Sbjct: 256 RALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVT 315
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+SL+S Y G ++ + + ++M K + YT +IS L + G+ + A YDE
Sbjct: 316 YNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ N L+ + R + + ++ L + G P TW L + + G
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDS 435
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNS 365
+V FK+ + ++P+ + + G D A + + AG + YN+
Sbjct: 436 EVSGVFKEMKKA--GYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 493
Query: 366 LLRTYAKAGK 375
+L A+ G+
Sbjct: 494 VLSALARGGR 503
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 182/399 (45%), Gaps = 51/399 (12%)
Query: 17 RQRVAQAQALQT--RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSEC 74
R+R +A Q + + FE PDK+ T ++LL Y + ++ EA ++++M
Sbjct: 254 RRRALYKEAAQVFDEMKASGFE--PDKV----TFNSLLDVYGKARRHDEAIEVIQEMERV 307
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAAC--ASQNDKE 131
G + YN +++ Y+ +G L++ + QE++ K PDVVTY ++ A + D
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAA 367
Query: 132 TAE---------------------------------KAFLELKKTKIDPDWISYSTLTSL 158
E F EL+ PD ++++TL ++
Sbjct: 368 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAV 427
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ + L + + KEM+K R Y SL+S Y+ G D ++I+K+MM +
Sbjct: 428 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPD 487
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ Y V+S+L + G +E+AE ++ E E D + LL AY N +L+ ++ +
Sbjct: 488 VSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHRLITAAYNKL 336
+ ++ I+P W + T L ++ + E +KA +R + D ++ A +
Sbjct: 548 DIYSERIEP--HNWLVKTL-VLVNSKVNNLAEA-EKAFLELRQKRCSLDINVLNAMVSIY 603
Query: 337 EEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAG 374
+ + E +L ++ +A ++S YNSL+ Y++ G
Sbjct: 604 GKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 50/347 (14%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ A ++ R + + A+ R F +PD + T + LL + QN +E
Sbjct: 386 YNALIKMHGVRGKFPEMMAVFDELRSAGF--VPDIV----TWNTLLAVFGQNGLDSEVSG 439
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
+ ++M + G++ Y +++ Y G D Q+ + + + PDV TYN L+A A
Sbjct: 440 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALA 499
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK------------------ 167
E AEK F E+++ PD SYS+L Y + +K
Sbjct: 500 RGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW 559
Query: 168 -----------------AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
A E+ ++ C + ++++S+Y K+ ++R +K+
Sbjct: 560 LVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYG----KNRMVRKVEKI 615
Query: 211 MSLFAK----MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+SL + ++ A Y ++ +LG+ EK ENI E +S D N ++ AY
Sbjct: 616 LSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGR 675
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ Q++ A ++ + G+KP T+ + Y+ E+ +E +
Sbjct: 676 KGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR 722
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 11/268 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + + +AE L +M E Y+ +L+ Y + +LDK
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK---- 541
Query: 103 LQELKKNTSPDVVTYNLWLAAC-----ASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ L + + + + WL + N+ AEKAFLEL++ + D + + S
Sbjct: 542 MKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVS 601
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+Y K + K L M++ + Y+SL+ +Y+ +G ++ I ++ S +
Sbjct: 602 IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRP 661
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y VI + + G+ ++A ++ E + D NI + +Y++ + E A
Sbjct: 662 DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELV 721
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+VT+G KP T+ + GY + G++
Sbjct: 722 RYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L++S V N AE L + C L N M+++Y N + KV ++L +K++
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVL--NAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 111 -SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ TYN + + D E E E+K + + PD SY+T+ Y + ++A+
Sbjct: 624 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEAS 683
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM+ + + V Y+ + Y + +E + + + M++ K N+ Y ++
Sbjct: 684 RLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Query: 230 VKLGEFEKAE 239
+ G+ A+
Sbjct: 744 CRNGKLTDAK 753
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 159/353 (45%), Gaps = 10/353 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SA++ +Y ++ + EA + + M + G + YN +++ G L + + E++
Sbjct: 239 SAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQ 298
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K PD +T+N +A C+ E +++ F E+++ I+ D +++TL K E
Sbjct: 299 KEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQME 358
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
AA+ + M + N V YS+++ Y +G +E + ++ M + + Y +I
Sbjct: 359 LAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLI 418
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
KLG F+ A + E + D N L+ AY + + + A ++++ +G+
Sbjct: 419 DIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLV 478
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L Y K G + V F + + K PD L ++ + + G ++ A
Sbjct: 479 PNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLK--PDVVLYSSLIDSCCKCGLVEDAV 536
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKV 398
LL + AG + YNSL+ Y + G+ ++++ M QK+
Sbjct: 537 VLLQEMTQAGIQPNIVTYNSLIDAYGRYGQ-----ADKLEAVKANMPNSVQKI 584
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 132/300 (44%), Gaps = 11/300 (3%)
Query: 83 YNHMLNLYISN-GQLDKVPQMLQEL----KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
++ + ++ IS G+L KV L K +V Y+ ++A A K F
Sbjct: 199 WSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVF 258
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL-KEMEKRTCRKNRVAYSSLLSLYTN 196
+KK P+ I+Y+T+ K + K A + EM+K +R+ ++SL+++ +
Sbjct: 259 QAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSR 318
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G ++ R++ +M + + + +I ++ K G+ E A +I + + +
Sbjct: 319 GGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVT 378
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL-ECFKKA 315
+ ++ Y E A S Y+ + G++P ++ L Y K G+ + L C
Sbjct: 379 YSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDME 438
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
++ V + + AY K QG A L ++ G V + Y++L+ +Y+KAG
Sbjct: 439 RVGLKADVVTYNALIDAYGK---QGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAG 495
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L+ Y + + +A + M G + YN +++ Y G+ +
Sbjct: 409 PDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACL 468
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++K + P+V+TY+ + + + + F E K+ + PD + YS+L K
Sbjct: 469 FDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCK 528
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
L E A L+EM + + N V Y+SL+ Y G D++
Sbjct: 529 CGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKL 570
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 39/272 (14%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A F +K + +YS + S Y + +A + M+K C+ N + Y+++
Sbjct: 217 EIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTI 276
Query: 191 LSLYTNMGYK-DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
+ G + L I+ +M + + + +I+ + G +E ++ ++ E +
Sbjct: 277 IDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRG 336
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D N L+ A Q+E+A S + K I P T+ + GY K G
Sbjct: 337 IEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLG------ 390
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
CF++AI + Y+ ++E G VS YN+L+
Sbjct: 391 -CFEEAI--------------SLYHDMKESG------------VRPDRVS---YNTLIDI 420
Query: 370 YAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
YAK G+ LI + M++ ++ D T L
Sbjct: 421 YAKLGRFDDALIACKDMERVGLKADVVTYNAL 452
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDK---VPQMLQELKKNTSPDVVTYNLWLAACASQ 127
M + F N +L LY +LDK +L K+N P + TY L +
Sbjct: 1 MKDLEFPVTTFACNQLLLLY---KRLDKKKIADVLLLMEKENIKPSLFTYKLLIDTKGQS 57
Query: 128 NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
ND ++ +K I+PD + L Y L EKA LKEME ++R A
Sbjct: 58 NDLTGMDQIVETMKADGIEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWAC 117
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE--- 244
LL LY +G DEV R+WK S E VI + KL + +KAE +++
Sbjct: 118 RLLLPLYAALGKADEVERVWKVCES---SPQLEECVAVIEAWGKLKKIDKAEEVFNRMLT 174
Query: 245 -WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
W+ +S R + LL Y + L + ++ G + TW+ L Y++ G
Sbjct: 175 TWKKLSS----RHYSALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAG 230
Query: 304 QMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-T 360
++EK KA ++ + +I Y K +GD+ AE + +R AG+V+
Sbjct: 231 EVEKADSVLHKAAQQNHMKPMFSSYIVIMDQYAK---RGDVHNAEKMFHRMRQAGYVARL 287
Query: 361 EIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
+ +L++TY A I ERM+ DN+
Sbjct: 288 RQFQALVQTYINAKAPAYGIRERMKADNI 316
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-- 106
SALL Y +K A + L++KM++ G PL ++ ++ LY+ G+++K +L +
Sbjct: 185 SALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKADSVLHKAAQ 244
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + P +Y + + A + D AEK F +++ + L YI + P
Sbjct: 245 QNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQFQALVQTYINAKAP 303
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 16/299 (5%)
Query: 96 LDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
LD+ Q+ QEL +KNT +YN+ L A + + A + F E+ PD ++Y
Sbjct: 238 LDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
+ Y + E A L EM R N VAY+S+++L + G + +R+ + M+
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
++ A +T V+S + G+ A N +DE + D L+ +L+ AE
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
+ KG+ T+ +L GY K G+M + K + ++ P+ TA +
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ--KRVTPNVVTYTALSD 468
Query: 335 KLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMD 392
L +QGD+ A LL + + G ++ YNSL+ KAG + E+ + + MD
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL-----EQAMRTMIDMD 522
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 124/322 (38%), Gaps = 39/322 (12%)
Query: 24 QALQTRARENFFENLPDKMRGPD---TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+AL T R L D+M P T ++H Y + A L+ +M+ G P
Sbjct: 261 KALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y ++ L GQ+ ++++++ D + ++ + D A F E
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++K + D ++Y+ L + + ++A L+EME + + V Y+ L+ Y +G
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 200 KDEVLRIWKKMM-----------------------------------SLFAKMNDAEYTC 224
E + KM+ S ++N Y
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I+ L K G E+A + + D ++ A +L+ A S ++ KG
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 285 IKPCYTTWELLTWGYLKKGQME 306
IKP T+ +L G+ G++E
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVE 582
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 109/266 (40%), Gaps = 1/266 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ ++ + + A A ++M + G + Y ++N G+L + ++LQE++
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K D VTY + + A ++ + ++ P+ ++Y+ L+ K
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + N Y+SL++ G ++ +R M K + YT +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L + E ++A ++ E N+L+ + ++E + ++ K I P
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFK 313
TT+ L Y + M+ E +K
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYK 624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 3/237 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L++ + +A M M E G Y ++ + +LD+ +LQE
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P +VTYN+ + E ++ + + I P+ +Y++L Y +E
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC-IEKN 615
Query: 166 EKAATTL-KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
K+ T + K M + N Y+ L+ + E L +M+ ++ + Y
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+I L K +F +A ++++ T +P V N + N + LE + + LV
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/294 (18%), Positives = 119/294 (40%), Gaps = 3/294 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A + + E + + DK D T + L+ Y + K EA + KM + +
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 82 PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
Y + + G + ++L E+ K ++ TYN + + E A + +++
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ + PD +Y+T+ + + ++A + L+EM + + V Y+ L++ + G
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+ R+ + M+ N Y ++ + IY S + NIL
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ + ++ A F++ ++ KG + +++ L KK + + F+K
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEK 695
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 17/324 (5%)
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKNTSPD--VVTYNLWLAACASQNDKETAEKAFLE 139
P N +S LD+ + +EL PD V ++N+ L A S + A + F E
Sbjct: 226 PSPESCNAVLSRLPLDEAIALFREL-----PDKNVCSHNILLKALLSAGRLKDACQHFDE 280
Query: 140 LKKTKIDPDWISYSTLTSLY-IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+ PD ++Y T+ Y ++ EL E A L EM + N Y+S+++L N G
Sbjct: 281 MSSP---PDVVTYGTMVHGYCVRGEL-ENAVKLLDEMAAKGLESNATVYTSVIALLCNKG 336
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+ LR+ + M ++ +T VIS G+ A +++E + D
Sbjct: 337 QVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHT 396
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
L+ +L+ A+ +V KG+ T+ +L GY K+G M + + +G
Sbjct: 397 ALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG- 455
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM- 376
R+ P+ TA + L +QGD+ A LL + N G ++ YNSL+ K G +
Sbjct: 456 -RRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLE 514
Query: 377 -PLIIVERMQKDNVQMDAETQKVL 399
+ I+ M+ + D T L
Sbjct: 515 QAMRIMTEMEAAGHRTDVYTYTTL 538
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 55/338 (16%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+ ++ + A A L E+M + G + + ++N G+L + ++LQE+
Sbjct: 361 TTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVD 420
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K DVVTY + + + + A + E+ ++ P+ ++Y+ L+ K
Sbjct: 421 KGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRA 480
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + N Y+SL++ G ++ +RI +M + + + YT +I
Sbjct: 481 ANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLID 540
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L K GEF++A N+ E ++ KGIKP
Sbjct: 541 TLCKSGEFDRAHNMLQE-----------------------------------MLDKGIKP 565
Query: 288 CYTTWELLTWGYLKKGQME---KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
T+ +L G+ G++E K+LE + +VR V YN L +Q ID
Sbjct: 566 SIATYNVLMNGFCMSGRVEGGKKLLEWMLEK--NVRPNV-------VTYNSLMKQYCIDK 616
Query: 345 AEHLLVTLRNAGHVSTEI------YNSLLRTYAKAGKM 376
+ H S E+ YN L++ + KA M
Sbjct: 617 NMKSTTEIYKGMH-SQEVAPNENTYNILIKGHCKARNM 653
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 99/236 (41%), Gaps = 1/236 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L++ + +A +M +M G Y +++ +G+ D+ MLQE
Sbjct: 499 TYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P + TYN+ + E +K + + + P+ ++Y++L Y +
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNM 618
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ K M + N Y+ L+ + E L ++M+ ++ + Y+ +
Sbjct: 619 KSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
I L K +F +A +D+ + T +P V + + N + LE + + LV
Sbjct: 679 IRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 122/323 (37%), Gaps = 38/323 (11%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A FE + + D T +AL++ + + EA+ ++++M + G + Y ++
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLI 434
Query: 88 NLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ Y G + + ++ E+ + +P+VVTY Q D A + E+ ++
Sbjct: 435 DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLE 494
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
+ +Y++L + K E+A + EME R + Y++L+ G D +
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNM 554
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN-------------------------- 240
++M+ K + A Y +++ G E +
Sbjct: 555 LQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCI 614
Query: 241 ---------IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
IY S + NIL+ + ++ A F+ ++ KG++ ++
Sbjct: 615 DKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASS 674
Query: 292 WELLTWGYLKKGQMEKVLECFKK 314
+ L KK + + F K
Sbjct: 675 YSALIRLLNKKKKFSEARVFFDK 697
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 22/344 (6%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L++ ++ K +EA L+E+MSE G + +N M+ Y G++D
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ +++++ SPD VTYN + + A + E+ + + D ++ +T+ +
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E+A L KR + V+Y +L+ Y G D L++W +M +
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y C+I L + G+ E+A + +E D N +L Y +E A F+N++V
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI-TAAYN----KL 336
KP T +L G +G +EK L+ F WV + I T YN L
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGMLEKALKLFN-------TWVSKGKAIDTVTYNTLITSL 638
Query: 337 EEQGDIDGAEHLLVTLR----NAGHVSTEIYNSLLRTYAKAGKM 376
++G +D A +LL + H + YN+++ +G++
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYT---YNAIITALTDSGRI 679
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 1/242 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +L + + KK EA L+ + G+ + Y ++ Y +G +D+ ++ E+
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K P VTYN + E A EL ++ + PD +Y+T+ Y +
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA +M + + + + + LL G ++ L+++ +S ++ Y +
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+SL K G + A N+ E E D N ++ A + ++ AE F ++++ KG
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGX 694
Query: 286 KP 287
P
Sbjct: 695 LP 696
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 141/336 (41%), Gaps = 6/336 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + +L + + + +A L+ M G L YN ++ Y G L + +
Sbjct: 241 PDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300
Query: 103 LQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ + +N PDV TYN+ + ++ E A K E++ K+ PD +SY+TL + ++
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+A L+EM ++ + N V ++ ++ Y G D+ KM +
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I+ K G +A DE + D N +L +LE A +
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G ++ L GY K G +++ L+ + + ++ +P L + G
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM--KEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 342 IDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
+ A L L +G + E YN++L Y + G +
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 140/336 (41%), Gaps = 9/336 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSEC---GFLKCPLPYNHMLNLYISNGQLDKVPQML 103
TC+ LL+S V+ S E ++ G + +N ++ Y + + L
Sbjct: 172 TCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFL 231
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ K N SPD VTYN L A + A +++K + P+ +Y+ L Y KM
Sbjct: 232 NVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKM 291
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++AA ++ M + + Y+ L++ N G +E ++ +M +L + Y
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I+ ++ + +A + +E + NI++ Y +++ A + ++
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DHRLITAAYNKLEEQGD 341
G P T+ L GY K G M E F+ RK + D + L +
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMG---EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++ A LL + R G+ E+ Y +L+ Y K G +
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 123/321 (38%), Gaps = 38/321 (11%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + +K P+ T + ++ Y + K +A + KM E GF + YN ++N Y
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + + + E+ +KN D VT N L + E A K +K D +
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR----- 205
SY TL Y K ++A EM+++ + V Y+ ++ G ++ +
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549
Query: 206 ----------IWKKMMSLFAKMNDAE------------------YTC--VISSLVKLGEF 235
+ ++ + + D E +TC ++ L G
Sbjct: 550 LESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGML 609
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
EKA +++ W S D N L+ + +L+ A + + + K + P + T+ +
Sbjct: 610 EKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669
Query: 296 TWGYLKKGQMEKVLECFKKAI 316
G++ + E K +
Sbjct: 670 ITALTDSGRIREAEEFMSKML 690
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 151/350 (43%), Gaps = 15/350 (4%)
Query: 34 FFENLPDKMRGPDTC----SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FFE+L K RG C +ALL + + EA ++ +M + G + YN +
Sbjct: 267 FFEDL--KARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGT 324
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G ++ + L + K P+ TYN + A + + A F ++KKT P+
Sbjct: 325 YARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPN 384
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + + K L EM + C NRV ++++L++ G +D V R+ +
Sbjct: 385 VNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 444
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M S +++ Y +I++ + G A +Y+E S T N LL +
Sbjct: 445 GMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQG 504
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS---VRKWVPD 325
A+S +++ TKG KP ++ LL Y K G + + + GS WV
Sbjct: 505 DWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVIL 564
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
L+ A + +DG E ++ G+ I+NS+L YAK G
Sbjct: 565 RTLVIANFKCRR----LDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNG 610
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 145/367 (39%), Gaps = 36/367 (9%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+ + + A L ++ G + YN +L++Y G+ ++ +L E++
Sbjct: 178 TTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMR 237
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD T + +AAC + A F +LK P ++Y+ L ++ K
Sbjct: 238 AAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYT 297
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L EME+ C+ + V Y+ L Y G+ +E R M S N Y V+
Sbjct: 298 EALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVM 357
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
++ +G+ ++A ++D+ + + N++L +++ + + G
Sbjct: 358 TAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCT 417
Query: 287 PCYTTWELLTWGYLKKGQ---MEKVLECFKK---------------AIG----------- 317
P TW + K+G + +VLE + A G
Sbjct: 418 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 477
Query: 318 ----SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAK 372
+ + P A N L QGD A+ ++ +R G E Y+ LL+ YAK
Sbjct: 478 YNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAK 537
Query: 373 AGKMPLI 379
G + I
Sbjct: 538 GGNVAGI 544
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ML++Y NG K ++ +K++ SPD++TYN + A ++ AEK +LK
Sbjct: 599 FNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 658
Query: 142 KTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
++ + PD +SY+T+ + + K L ++A L EM V Y +L+ Y+++
Sbjct: 659 CSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMF 718
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
E + M+ K + Y V+ S + FE+A E
Sbjct: 719 SEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSE 762
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 124/320 (38%), Gaps = 41/320 (12%)
Query: 94 GQLDKVPQMLQE--LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
GQ D V +L E L + DV Y L A + E A + F EL++ + P ++
Sbjct: 152 GQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVT 211
Query: 152 YSTLTSLYIKM------------------------------------ELPEKAATTLKEM 175
Y+ + +Y +M L ++A +++
Sbjct: 212 YNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDL 271
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ R V Y++LL ++ G E LR+ +M + + Y + + + G F
Sbjct: 272 KARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFF 331
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
E+A D S + N ++ AY N +++ A + ++++ G P T+ L+
Sbjct: 332 EEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLV 391
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
KK + +LE + S P+ ++G D +L +R+
Sbjct: 392 LGMLGKKSRFTVMLEMLGEM--SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSC 449
Query: 356 G-HVSTEIYNSLLRTYAKAG 374
G +S + YN+L+ Y + G
Sbjct: 450 GVELSRDTYNTLIAAYGRCG 469
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 121/323 (37%), Gaps = 44/323 (13%)
Query: 29 RARENFFENLPDKMRG------PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
R E++ + + MR DT + L+ +Y + A + +M+ GF C
Sbjct: 433 RGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITT 492
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDK----------- 130
YN +LN+ G ++ +++ K P+ +Y+L L A +
Sbjct: 493 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVY 552
Query: 131 -------------------------ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ E AF E+K +PD + ++++ S+Y K +
Sbjct: 553 GSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMY 612
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDAEYTC 224
KA +++ + + Y+SL+ +Y E +I ++ S K + Y
Sbjct: 613 SKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNT 672
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
VI+ K G ++A+ + E + + L+ Y + A +V G
Sbjct: 673 VINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHG 732
Query: 285 IKPCYTTWELLTWGYLKKGQMEK 307
+KP T+ + Y + + E+
Sbjct: 733 LKPMELTYRRVVESYCRAKRFEE 755
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 6/283 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
++ F+ + D PD T + ++ + +QN EA L ++M E G + YN +L++
Sbjct: 269 QSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDV 328
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + ++L E++ SP++VTYN +AA A + A L + PD
Sbjct: 329 YGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPD 388
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y TL S + + E EKA T EM K C N V Y+ L+ +Y M D++++++K
Sbjct: 389 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 448
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M + + ++ S G + N++ E + NIL+ Y
Sbjct: 449 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 508
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKV 308
++ + Y L+ G++P T+ L ++G Q EKV
Sbjct: 509 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKV 551
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 153/361 (42%), Gaps = 26/361 (7%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ + ++ E L E M G + YN ML+LY G D++ + QE+K
Sbjct: 217 TSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMK 276
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SPD TYN + AC + + A + F E+K+ P+ ++Y+ L +Y K + +
Sbjct: 277 DLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHK 336
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A+ L EME N V Y+ L++ Y G DE + K ++S ++ Y +I
Sbjct: 337 EASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 396
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S+ + +EKA + E + T + NIL+ Y +L+ + + K
Sbjct: 397 SAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCT 456
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P TW L + G + +V F++ + A Y +D
Sbjct: 457 PDLVTWNSLLKSFGNCGMLTEVSNVFRE-------------MKRAGY-----MPGVDTFN 498
Query: 347 HLLVTLRNAGHV--STEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSE 404
L+ G+V S +IY LLRT G P + ++ + Q+ K++ E
Sbjct: 499 ILIECYGRCGYVDYSVDIYKGLLRT----GLQPTVPTFAALMASLAREGRWQQCEKVSQE 554
Query: 405 M 405
M
Sbjct: 555 M 555
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 99/201 (49%), Gaps = 7/201 (3%)
Query: 46 DTCSA-LLHSYVQNKKSAEAEALMEKMSECGFLKCPLP---YNHMLNLYISNGQLDKVPQ 101
D C A L+HSY + + + ++++ + K PL + Y G ++
Sbjct: 564 DACHAGLIHSYANSGQFFQLRKYIDELEKSA--KQPLSGILCKTFVLAYCKCGMDNEAQL 621
Query: 102 MLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
L +L N SPD+ +N ++ CA + E A K E++K ++ PD ++Y+ L S+Y
Sbjct: 622 ALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYG 681
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ + KA + EM + N + Y++LL YT G D+ R++ M++ + ++
Sbjct: 682 REGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNF 741
Query: 221 EYTCVISSLVKLGEFEKAENI 241
+ ++ S LG +++A ++
Sbjct: 742 TFNTLVGSYSSLGLYKEALSV 762
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ S + + + E + ++M+E G + +++ Y ++GQ ++ + + EL
Sbjct: 531 TFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 590
Query: 107 KKNTS---PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+K+ ++ LA C D E A+ A +L PD ++ + S+ K
Sbjct: 591 EKSAKQPLSGILCKTFVLAYCKCGMDNE-AQLALNQLYDNGHSPDIKVFNAMISMCAKRG 649
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
E+A L+E+ K + + V Y+ L+S+Y G + + +M N Y
Sbjct: 650 WIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYN 709
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
++ S K G + A ++ + + D N L+ +Y + + A S +
Sbjct: 710 TLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEH 769
Query: 284 GIKPCYTTWELLTWGY 299
G +P T++ L GY
Sbjct: 770 GCQPTQITFKALLDGY 785
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 131/307 (42%), Gaps = 25/307 (8%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK----KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
YN ++++Y G+++K+ M++ K KN +PD+VT+N L + + F
Sbjct: 427 YNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFR 483
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+K+ P +++ L Y + + + K + + + +++L++ G
Sbjct: 484 EMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREG 543
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES-----ISGTGD 253
+ ++ ++M +++DA + +I S G+F + DE E +SG
Sbjct: 544 RWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGI-- 601
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLE 310
+ + AY A+ N+L G P + + K+G +E K+LE
Sbjct: 602 --LCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLE 659
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+KA + PD + +G AE ++ +R AG I YN+LL +
Sbjct: 660 EIRKA-----QLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYS 714
Query: 370 YAKAGKM 376
Y K G+M
Sbjct: 715 YTKHGRM 721
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 26/282 (9%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y++L S+ + ++ T + M++ R N V Y+ +L LY G W
Sbjct: 212 DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDS------W 265
Query: 208 KKMMSLFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ SLF +M D E Y +I++ ++ ++A ++ E + + N L
Sbjct: 266 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 325
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L Y + A + GI P T+ L Y + G ++ KK++ S +
Sbjct: 326 LDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEA-AALKKSLLS-K 383
Query: 321 KWVPD---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD + + +A+N+ E + A +R + YN L+ Y + K+
Sbjct: 384 GLCPDEFTYCTLISAFNRAER---YEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKL 440
Query: 377 P--LIIVERMQKDNVQMDAET-QKVLKITSEMP-VSEVSSIF 414
+ + + MQ+ N D T +LK ++EVS++F
Sbjct: 441 DDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVF 482
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/288 (18%), Positives = 108/288 (37%), Gaps = 4/288 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ + +K PD T ++LL S+ E + +M G++ +N ++ Y
Sbjct: 447 FKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGR 506
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +D + + L + P V T+ +A+ A + + EK E+ + +
Sbjct: 507 CGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDAC 566
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRK-NRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++ L Y + + E+EK + + + + + Y G +E ++
Sbjct: 567 HAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQL 626
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + +IS K G E+A + +E D N L++ Y
Sbjct: 627 YDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMY 686
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
AE + + G P T+ L + Y K G+M+ F + +
Sbjct: 687 YKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA 734
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 1/272 (0%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G TCS LL+ ++ K A+AE ++E + G + YN ++N Y L +
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393
Query: 104 QELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+++K ++ PD +TYN + AE +E++K+ +DP +++TL Y +
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRA 453
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
EK T L +M+ + + N +++ S++ + G E + I M+ N Y
Sbjct: 454 GQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVY 513
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + ++ G E+A + ++ +S + N+LL +Q++ AE L
Sbjct: 514 NSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTN 573
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+G++P ++ + KG ++ LE ++
Sbjct: 574 QGLRPDVVSYNTIISACCNKGDTDRALELLQE 605
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 139/361 (38%), Gaps = 47/361 (13%)
Query: 75 GFLKCPLPY----NHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQND 129
G ++ PLP N +L +S G+ V L PD +N + AC + D
Sbjct: 114 GSVRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGD 173
Query: 130 KETAEKAFLELKKTK--IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
+ A + +++ PD SY+ + + + A EM R N++ Y
Sbjct: 174 LDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITY 233
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE--- 244
++++ + G + R+ +M+ K N Y ++S L + G ++ + DE
Sbjct: 234 NTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS 293
Query: 245 -------------WESISGTGDPR-------------------VPNILLAAYINRNQLEM 272
++ ++ TGD R +ILL ++
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK 353
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
AE LV G+ P + L GY + ++ F++ R PDH A
Sbjct: 354 AEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM--KSRHIRPDHITYNAL 411
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERMQKDNV 389
N L + I AE L++ + +G S E +N+L+ Y +AG++ ++ MQ +
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471
Query: 390 Q 390
+
Sbjct: 472 K 472
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+++ ++ +N K EA A+++ M + YN +++ YI +G ++ +++++K
Sbjct: 479 GSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKS 538
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ S + TYNL L + + AE+ L + PD +SY+T+ S ++
Sbjct: 539 SGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDR 598
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
A L+EM K R Y LLS + G ++ +++ M+
Sbjct: 599 ALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMV 642
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/198 (17%), Positives = 84/198 (42%), Gaps = 1/198 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T + L+ +Y + + + ++ M + G + + ++ + NG++ + +L +
Sbjct: 441 ETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDD 500
Query: 106 L-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ K+ P+ YN + A E A ++K + + +Y+ L K
Sbjct: 501 MIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQ 560
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A + + + R + V+Y++++S N G D L + ++M + Y
Sbjct: 561 IDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHP 620
Query: 225 VISSLVKLGEFEKAENIY 242
++S+L G E +Y
Sbjct: 621 LLSALGSAGRVHDMECLY 638
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 187/420 (44%), Gaps = 63/420 (15%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD---------TCSALLHSYVQN 58
G +A+S +++++ + +++ F N+ D+++ D T + ++ +Y +
Sbjct: 196 GEYDKAKSLLHEISESRGV----KDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQ 251
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTY 117
EA AL E+M GFL + Y+ ++N +G+L + ++L+E+KK P+ V Y
Sbjct: 252 HGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAY 311
Query: 118 -----------NLWLA-ACASQ-----------------------NDKETAEKAFLELKK 142
+ W A AC SQ + + AE F L K
Sbjct: 312 TTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSK 371
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ P+ I+Y+ L Y K+ E+ + L+EME++ N + YSS+++ YT G DE
Sbjct: 372 LNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDE 431
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ + KKM+ N Y +I K G+ E A ++Y+E + +SG +V N+L
Sbjct: 432 AINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK-LSGL---KVNNVLFD 487
Query: 263 AYINR----NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+N +++ AE + ++G+ + + L G+ K G+ L ++
Sbjct: 488 VLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEM--- 544
Query: 319 VRKWVP-DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
K +P D N L E G + A+ + + G + YN +++ Y K G++
Sbjct: 545 TEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGEL 603
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 173/432 (40%), Gaps = 68/432 (15%)
Query: 34 FFENLPDKMRGPDTC------SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+ E + D + TC + L+ Y + + + A L+E+M + G L + YN ++
Sbjct: 130 YGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLI 189
Query: 88 NLYISNGQLDKVPQMLQELKK----------------------NTSPDVVTYNLWLAACA 125
N + G+ DK +L E+ + N D++TY ++
Sbjct: 190 NGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYC 249
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
Q+ E A + E+ PD ++YS++ + K +A L+EM+K N V
Sbjct: 250 KQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHV 309
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++L+ G E +++ ++ T ++ L K + ++AE+++
Sbjct: 310 AYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRAL 369
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
++ + L+ Y +E ES + K I P T+ + GY KKG +
Sbjct: 370 SKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGIL 429
Query: 306 EKVLECFKKAIGSVRKWVPD----------------HRLITAAYNKLEEQG--------- 340
++ + KK + + +P+ + T YN+++ G
Sbjct: 430 DEAINVMKKMLD--QNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFD 487
Query: 341 ----------DIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK--MPLIIVERMQKD 387
+D AE LL + + G + + Y SL+ + KAGK L +VE M +
Sbjct: 488 VLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEK 547
Query: 388 NVQMDAETQKVL 399
++ D T VL
Sbjct: 548 SIPFDVVTYNVL 559
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 9/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++L+ + + K + A ++E+M+E + YN ++N + +G+ + ++
Sbjct: 522 TSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEM 581
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+P+ TYN+ + A Q + + A + + E+K KI P I+ +TL + EKA
Sbjct: 582 GLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKA 641
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L EM N V + LL+ + G + VL++ ++++ + K+N Y +I
Sbjct: 642 MNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVV 701
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
+L +KA ++ D N L+ Y + ++ A + Y +++ +G+ P
Sbjct: 702 FCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPN 761
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGA 345
T+ LL G L G M + E F K PD + + + Y K+ G+ +
Sbjct: 762 IVTYNLLLGGLLGAGLMAERDELFDKM--KENGLNPDASTYDTLISGYGKI---GNKKES 816
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
L + G V T YN L+ +AK GKM
Sbjct: 817 IRLYCEMVAQGFVPKTSTYNVLISDFAKVGKM 848
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 126/287 (43%), Gaps = 22/287 (7%)
Query: 51 LLHSYVQN--KKSAEAEALM---EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
++H + N KS +A A++ E++ + G YN+++ ++ K +L+
Sbjct: 658 VIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKY 717
Query: 106 LKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ ++ D VTYN + + + A + ++ + P+ ++Y+ L + L
Sbjct: 718 MIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGL 777
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ +M++ + Y +L+S Y +G K E +R++ +M++ + Y
Sbjct: 778 MAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNV 837
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN--------RNQLEMAESF 276
+IS K+G+ ++A + +E + +IL+ + N R ++ +
Sbjct: 838 LISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTD 897
Query: 277 YNRLVT----KGIKPCYTTWELLTWGYLKKGQM---EKVL-ECFKKA 315
L+T KG PC +T ++ + + G+M EK+L E F A
Sbjct: 898 AKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHA 944
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ Y ++ +A A +M G + YN +L + G + + ++ ++
Sbjct: 729 TYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKM 788
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N +PD TY+ ++ +K+ + + + E+ P +Y+ L S + K+
Sbjct: 789 KENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKM 848
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-----SLFAKMNDA 220
++A L EM+ R + Y L+ + N+ ++ R KK+ +L +MND
Sbjct: 849 DQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDK 908
Query: 221 EYT-------CVISSLVKLGEFEKAENIYDE 244
+ C+ S+ + G+ AE + E
Sbjct: 909 GFVPCKSTIACISSTFARPGKMLDAEKLLKE 939
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 98/254 (38%), Gaps = 33/254 (12%)
Query: 113 DVVTYN--LWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKAA 169
D VTYN +W C Q+ FL + K D I+ + L + ++ L +
Sbjct: 76 DTVTYNTVIW-GFC--QHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGE 132
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ + K+ + +++L+ Y G L + ++M + Y +I+
Sbjct: 133 RIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGF 192
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNI---------------------LLAAYINRN 268
K GE++KA+++ E G D NI +++ Y ++
Sbjct: 193 CKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQH 252
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDH 326
LE A + Y ++ G P T+ + G K G++ + E + K +G P+H
Sbjct: 253 GLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV----DPNH 308
Query: 327 RLITAAYNKLEEQG 340
T + L + G
Sbjct: 309 VAYTTLIDSLFKAG 322
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 7/330 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++++ ++ N + EA + +KM E G + YN +LN+Y G +K+ ++ +K
Sbjct: 204 TSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMK 263
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+PD TYN ++ C N E A E+K PD ++Y+ L +Y K +
Sbjct: 264 SAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSK 323
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L+EME C + V Y+SL+S Y G ++ L + +M+ K + YT ++
Sbjct: 324 EAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLL 383
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S K G+ + A I++E + + N L+ + NR + + + T
Sbjct: 384 SGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCS 443
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P TW L + + G +V FK+ + +VP+ + G D A
Sbjct: 444 PDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRA--GFVPERDTFNTLISSYSRCGSFDQAM 501
Query: 347 HLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
+ + AG V+ ++ YN++L A+ G
Sbjct: 502 AVYKRMLEAG-VNPDLSSYNAVLAALARGG 530
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 167/374 (44%), Gaps = 47/374 (12%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T +ALL Y ++++S EA ++++M G + YN +++ Y +G L+
Sbjct: 304 PDKV----TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLED 359
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAAC-ASQNDKETAE---------------------- 134
++ Q ++K PDV TY L+ + DK +
Sbjct: 360 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 419
Query: 135 ------------KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
K F ++K + PD ++++TL S++ + + + + KEM++
Sbjct: 420 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 479
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
R +++L+S Y+ G D+ + ++K+M+ + + Y V+++L + G ++++E +
Sbjct: 480 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 539
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E + + LL AY N ++E + + + I+P + L L
Sbjct: 540 AEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLV---LVN 596
Query: 303 GQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-S 359
+ + ++E ++A +R+ + PD + A + + + A +L ++ G S
Sbjct: 597 SKCDLLMET-ERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPS 655
Query: 360 TEIYNSLLRTYAKA 373
YNSL+ Y+++
Sbjct: 656 LTTYNSLMYMYSRS 669
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
L K D D +Y+++ + + +A K+ME+ C+ + Y+ +L++Y MG
Sbjct: 191 LCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGM 250
Query: 200 KDEVLRIWKKMMSLFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
W KM+ L +M A Y +IS + +E+A + E + +
Sbjct: 251 P------WNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSP 304
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N LL Y + + A + G P T+ L Y + G +E LE
Sbjct: 305 DKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELK 364
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG---HVSTEIYNSLLRT 369
+ + K PD T + E+ G A + +RN G ++ T +N+L++
Sbjct: 365 NQMVEKGIK--PDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICT--FNALIKM 420
Query: 370 YAKAGKM 376
+ GK
Sbjct: 421 HGNRGKF 427
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 112/292 (38%), Gaps = 36/292 (12%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ SY + +A A+ ++M E G YN +L G + ++L E
Sbjct: 482 DTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAE 541
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKE--------------------------------- 131
+K P+ +TY L A A+ + E
Sbjct: 542 MKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDL 601
Query: 132 --TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
E+AFLEL++ PD + + + S+Y + ++ KA L M++ + Y+S
Sbjct: 602 LMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNS 661
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L+ +Y+ + I +++++ + + Y VI + + G A + E
Sbjct: 662 LMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESG 721
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
D N +A+Y + A ++ G KP +T+ + Y K
Sbjct: 722 PAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 9 AQVRAQSYRQRVAQA-QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL 67
A V RQ VA+A + L R F +L T ++L++ Y ++ +E +
Sbjct: 626 AMVSIYGRRQMVAKANEILDCMKRGGFTPSL-------TTYNSLMYMYSRSANFERSEEI 678
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACAS 126
+ ++ G + YN ++ Y NG++ ++L E++++ +PD++TYN ++A+ A+
Sbjct: 679 LREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAA 738
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
+ A + K P+ +Y+++ Y K+ ++A+ + + K
Sbjct: 739 DSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRK 789
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWL 121
E E ++ + GF N M+++Y + K ++L +K+ +P + TYN +
Sbjct: 604 ETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLM 663
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + E +E+ E+ I PD ISY+T+ Y + A+ L EM +
Sbjct: 664 YMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPA 723
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
+ + Y++ ++ Y E + + M+ K N + Y ++ KL ++A
Sbjct: 724 PDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEA 780
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 6/346 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+E + D PD C + L+H + K EA+ L ++ + G + +N ++N Y
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G LD+ ++ + + +N PDV TY++ + + + A K FLE+ + P+ +
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++TL + + + ++M ++ + + + Y++L++ +G E ++ +M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
K + YT +I K G+ E A I E D L++ + Q+
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
AE ++ GIKP T+ ++ G+ KKG ++ + K+ VP
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM--QCDGHVPGVVTYN 509
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
N L +QG + A LL + N G V +I YN LL +A K
Sbjct: 510 VLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 148/334 (44%), Gaps = 8/334 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
+C L ++ ++ A A E++ +CG+ +N +++ ++++ + E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251
Query: 107 -KKNTSPDVVTYNLWLAA-CASQN-DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
K+ P VV++N + C S N D+ K F+ + ++ PD +YS L + K
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM--MENRVFPDVFTYSVLINGLCKEG 309
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ A EM R N V +++L++ + G D + I+++M+ K + Y
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I+ L K+G+ +A+ + E D +L+ LE A +V +
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GI+ + L G+ ++GQ+ + ++ + + K PD T + ++GD+
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIK--PDDATYTMVIHGFCKKGDVK 487
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
LL ++ GHV + YN LL K G+M
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK--KMMSLFAKMNDAEYTCVISSLVKL 232
+E R ++ + +S L++ YT+ GY + ++ ++ + +L + Y + L+KL
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY--LFDRLMKL 203
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
A Y+E D N+L+ +++ A+ + + +G++P ++
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF 263
Query: 293 ELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L GY K G +++ K+ + R + PD + N L ++G +D A L + +
Sbjct: 264 NTLINGYCKSGNLDQGFR-LKRFMMENRVF-PDVFTYSVLINGLCKEGQLDDANKLFLEM 321
Query: 353 RNAGHVSTEI-YNSLLRTYAKAGK--MPLIIVERMQKDNVQMDAETQKVL 399
+ G V ++ + +L+ + G+ + + I ++M + V+ D T L
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 156/338 (46%), Gaps = 6/338 (1%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAAC 124
+ + E GFL N ++ + + G ++++ + + +K++ P + T+N L
Sbjct: 176 CIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGL 235
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ E+AE+ F ++ KI PD +SY+T+ Y K +KA +MEKR ++
Sbjct: 236 VNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDK 295
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ Y +L+ + G D L ++++M ++ Y+ VI L K G + ++++
Sbjct: 296 ITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFEN 355
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ + L+ AY + A + + R+ +G +P T+ ++ G K G+
Sbjct: 356 MNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGR 415
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIY 363
+++ +E F+ + + ++ + L + G +D AE + G + Y
Sbjct: 416 LDEAVEYFE--FCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCY 473
Query: 364 NSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
N+L+ AK+GKM L++ +RM+K+ T +L
Sbjct: 474 NALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTIL 511
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 130/314 (41%), Gaps = 4/314 (1%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P S ++ ++ ++ E ++ E M++ G Y +++ Y NG +++ + +
Sbjct: 330 PHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFE 389
Query: 105 ELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+K + PD VTY + + + A + F K ++ + + YS+L K
Sbjct: 390 RMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAG 449
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++A +EM +R C ++ Y++L+ G +E L ++K+M YT
Sbjct: 450 RVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYT 509
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+IS L K E+A ++D T L ++ A + L
Sbjct: 510 ILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPM 569
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+ P T +E + K G+ E+ + + R+ VP R+ T N L + G+ D
Sbjct: 570 GVIP-ETAFEDMINVLCKAGRTEQACKLADGIVDRGRE-VPG-RVRTILINALRKAGNAD 626
Query: 344 GAEHLLVTLRNAGH 357
A L+ + G+
Sbjct: 627 LAMKLMHSKIGIGY 640
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 3/262 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF+ + + PD T ++LL A+ L+ +M + G ++ YN L+
Sbjct: 271 FFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLC 330
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
GQ+D ++L+E+ + P VVTY+ + CA N E A + E+K I D +
Sbjct: 331 KGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRV 390
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY+T+ +Y K+ ++A KEME +++ V Y++LLS Y G DEV R++++M
Sbjct: 391 SYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEM 450
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ N Y+ +I K G F++A ++Y +++ D ++ + +
Sbjct: 451 KAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLV 510
Query: 271 EMAESFYNRLVTKGIKPCYTTW 292
E + ++ KGIKP T+
Sbjct: 511 ESSIMLLIAMIEKGIKPNVVTF 532
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 4/268 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD--KVPQMLQE- 105
SA++ +Y +N ++A L M G + YN +++ + G++D V + E
Sbjct: 217 SAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAG-AKGEVDFDVVVKFFDEM 275
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + PD +TYN L+ CAS+ ETA+K E+ + I D +Y+T K
Sbjct: 276 LAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQI 335
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L+EM R V YS+++ ++ L ++++M ++ Y +
Sbjct: 336 DLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTM 395
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ KLG F++A E ES D N LL+ Y + + + I
Sbjct: 396 VGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNI 455
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK 313
P T+ + Y K G ++ ++ +K
Sbjct: 456 YPNTLTYSTMIDVYTKGGMFQEAMDVYK 483
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN M+ +Y G+ D+ +E++ DVVTYN L+ + + F E
Sbjct: 390 VSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEE 449
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K I P+ ++YST+ +Y K + ++A K+ +K + V Y+S++ G
Sbjct: 450 MKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGL 509
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ + + M+ K N + +I +
Sbjct: 510 VESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 6/308 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K SP+VVTYN L A A E A+ F ELK K PD +SYS L + +
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + EM+ + C+ N Y++L+ G DE LR+ +M + Y C+
Sbjct: 61 EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+L K G +A ++ E D N L+ + + A + G
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGC 180
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G K G+ K + F++ RK PD TA + L + G +D A
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRK--PDSITFTALMDALGKAGRVDDA 238
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVLKIT 402
LL ++ G YN+L+ + K G + +++ M+++ + D T L IT
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCL-IT 297
Query: 403 SEMPVSEV 410
+ S++
Sbjct: 298 GLIKASQL 305
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 8/378 (2%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A A+A Q + FE L PD S L++S + K A ++ +M G
Sbjct: 18 ALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKP 77
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAF 137
YN +++ GQ D+ ++L E++ N PDV TYN ++ A F
Sbjct: 78 NLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLF 137
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+++ PD +Y++L K+ +KA L+EME+ C + + YSSL++
Sbjct: 138 AEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKD 197
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G + +++++M K + +T ++ +L K G + A + DE +
Sbjct: 198 GETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTY 257
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L+A + L A + + + G KP T+ L G +K Q+++ + KK
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM-- 315
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
PD N L + G ++ A L +++ G + Y++L+ KA ++
Sbjct: 316 EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARV 375
Query: 377 --PLIIVERMQKDNVQMD 392
++ E M+ +Q D
Sbjct: 376 ESACVLFEEMESVGIQPD 393
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 158/363 (43%), Gaps = 12/363 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + + +EA L +M E G + YN ++ G+ K ++
Sbjct: 112 PDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL 171
Query: 103 LQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+E++++ P DV+TY+ + + A K F E+K+ PD I+++ L K
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A L EM++R + V Y++L++ + +G E + +M K +
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+C+I+ L+K + ++A + + E D N L+ L A ++R+
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQ 339
+KG P T+ L K ++E F+ +++G PD + L +
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG----IQPDLFTYCSIITVLGKA 407
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQ 396
G +D A+ L +R G I YN+ L + + G+ I E M++ + D T
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Query: 397 KVL 399
L
Sbjct: 468 DAL 470
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 163/381 (42%), Gaps = 10/381 (2%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQ-AQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQ 57
MER HG +Y + + +T F+ + + R PD T +AL+ + +
Sbjct: 175 MER---HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVT 116
+ +A L+++M E G + YN ++ + G L + +L E+K+N PDVVT
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
Y+ + + + A + +++K PD I+Y+TL + K L A M+
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
+ C + V YS+L++ + ++++M S+ + + Y +I+ L K G+ +
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD 411
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
A+ ++ E + D N L + + + A + + G+ P T++ L
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALL 471
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
G K +++ K+ I + D L G++D A LL + G
Sbjct: 472 LGLSKTKEVDDACGLLKELI--EQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529
Query: 357 H-VSTEIYNSLLRTYAKAGKM 376
YN+L+ AKAG++
Sbjct: 530 LWPGASSYNALIDALAKAGRV 550
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE++ + PD T ALL + K+ +A L++++ E G L ++ L +
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S G +D+ ++LQ K P +YN + A A A +LK+ PD +
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIV 570
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
SYS+L S + + A L+EM KR + + +YS+L+
Sbjct: 571 SYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 3/214 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+A Q + F + K PD T +A L+S + + EA + E M E G L
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
Y+ +L ++D +L+EL ++ + D + ++ L S + + A +
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ P SY+ L K +A TL++++++ + + V+YSSL+S G
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQ 584
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
D + ++M K++ Y+ ++ L G
Sbjct: 585 IDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 6/283 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
++ F+ + D PD T + ++ + +QN EA L ++M E G + YN +L++
Sbjct: 130 QSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDV 189
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + ++L E++ SP++VTYN +AA A + A L + PD
Sbjct: 190 YGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPD 249
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y TL S + + E EKA T EM K C N V Y+ L+ +Y M D++++++K
Sbjct: 250 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M + + ++ S G + N++ E + NIL+ Y
Sbjct: 310 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 369
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKV 308
++ + Y L+ G++P T+ L ++G Q EKV
Sbjct: 370 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKV 412
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 153/361 (42%), Gaps = 26/361 (7%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ + ++ E L E M G + YN ML+LY G D++ + QE+K
Sbjct: 78 TSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMK 137
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SPD TYN + AC + + A + F E+K+ P+ ++Y+ L +Y K + +
Sbjct: 138 DLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHK 197
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A+ L EME N V Y+ L++ Y G DE + K ++S ++ Y +I
Sbjct: 198 EASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 257
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S+ + +EKA + E + T + NIL+ Y +L+ + + K
Sbjct: 258 SAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCT 317
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P TW L + G + +V F++ + A Y +D
Sbjct: 318 PDLVTWNSLLKSFGNCGMLTEVSNVFRE-------------MKRAGY-----MPGVDTFN 359
Query: 347 HLLVTLRNAGHV--STEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSE 404
L+ G+V S +IY LLRT G P + ++ + Q+ K++ E
Sbjct: 360 ILIECYGRCGYVDYSVDIYKGLLRT----GLQPTVPTFAALMASLAREGRWQQCEKVSQE 415
Query: 405 M 405
M
Sbjct: 416 M 416
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 106/232 (45%), Gaps = 37/232 (15%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ S + + + E + ++M+E G + +++ Y ++GQ ++ + + EL
Sbjct: 392 TFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 451
Query: 107 KKNT-------------------------------------SPDVVTYNLWLAACASQND 129
+K+ SPD+ +N ++ CA +
Sbjct: 452 EKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGW 511
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
E A K E++K ++ PD ++Y+ L S+Y + + KA + EM + N + Y++
Sbjct: 512 IERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNT 571
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
LL YT G D+ R++ M++ + ++ + ++ S LG +++A ++
Sbjct: 572 LLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSV 623
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 132/309 (42%), Gaps = 25/309 (8%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELK----KNTSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN ++++Y G+++K+ M++ K KN +PD+VT+N L + +
Sbjct: 286 VTYNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNV 342
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
F E+K+ P +++ L Y + + + K + + + +++L++
Sbjct: 343 FREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAR 402
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES-----ISGT 251
G + ++ ++M +++DA + +I S G+F + DE E +SG
Sbjct: 403 EGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGI 462
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KV 308
+ + AY A+ N+L G P + + K+G +E K+
Sbjct: 463 ----LCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKL 518
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
LE +KA + PD + +G AE ++ +R AG I YN+LL
Sbjct: 519 LEEIRKA-----QLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLL 573
Query: 368 RTYAKAGKM 376
+Y K G+M
Sbjct: 574 YSYTKHGRM 582
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 26/282 (9%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y++L S+ + ++ T + M++ R N V Y+ +L LY G W
Sbjct: 73 DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDS------W 126
Query: 208 KKMMSLFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ SLF +M D E Y +I++ ++ ++A ++ E + + N L
Sbjct: 127 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 186
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L Y + A + GI P T+ L Y + G ++ KK++ S +
Sbjct: 187 LDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEA-AALKKSLLS-K 244
Query: 321 KWVPD---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD + + +A+N+ E + A +R + YN L+ Y + K+
Sbjct: 245 GLCPDEFTYCTLISAFNRAER---YEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKL 301
Query: 377 P--LIIVERMQKDNVQMDAET-QKVLKITSEMP-VSEVSSIF 414
+ + + MQ+ N D T +LK ++EVS++F
Sbjct: 302 DDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVF 343
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 114/305 (37%), Gaps = 38/305 (12%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ + +K PD T ++LL S+ E + +M G++ +N ++ Y
Sbjct: 308 FKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGR 367
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +D + + L + P V T+ +A+ A + + EK E+ + +
Sbjct: 368 CGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDAC 427
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRT--------CRKNRVAYS----------SLLSL 193
++ L Y + + E+EK C+ +AY +L L
Sbjct: 428 HAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQL 487
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
Y N G+ ++ +++ M+S+ AK G E+A + +E D
Sbjct: 488 YDN-GHSPDI-KVFNAMISMCAKR---------------GWIERAVKLLEEIRKAQLKPD 530
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
N L++ Y AE + + G P T+ L + Y K G+M+ F
Sbjct: 531 GVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFG 590
Query: 314 KAIGS 318
+ +
Sbjct: 591 DMVAA 595
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 22/344 (6%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L++ ++ K +EA L+E+MSE G + +N M+ Y G++D
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ +++++ SPD VTYN + + A + E+ + + D ++ +T+ +
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E+A L KR + V+Y +L+ Y G D L++W +M +
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y C+I L + G+ E+A + +E D N +L Y +E A F+N++V
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI-TAAYN----KL 336
KP T +L G +G +EK L+ F WV + I T YN L
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFN-------TWVSKGKAIDTVTYNTLITSL 638
Query: 337 EEQGDIDGAEHLLVTLR----NAGHVSTEIYNSLLRTYAKAGKM 376
++G +D A +LL + H + YN+++ +G++
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYT---YNAIITALTDSGRI 679
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 141/336 (41%), Gaps = 6/336 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + +L + + + +A L+ M G L YN ++ Y G L + +
Sbjct: 241 PDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300
Query: 103 LQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ + +N PDV TYN+ + ++ E A K E++ K+ PD +SY+TL + ++
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+A L+EM ++ + N V ++ ++ Y G D+ KM +
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I+ K G +A DE + D N +L +LE A +
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G ++ L GY K G +++ L+ + + ++ +P L + G
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM--KEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 342 IDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
+ A L L +G + E YN++L Y + G +
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 139/336 (41%), Gaps = 9/336 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSEC---GFLKCPLPYNHMLNLYISNGQLDKVPQML 103
TC+ LL+S V+ S E ++ G + +N ++ Y + + L
Sbjct: 172 TCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFL 231
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ K N SPD VTYN L + A +++K + P+ +Y+ L Y KM
Sbjct: 232 NVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKM 291
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++AA ++ M + + Y+ L++ N G +E ++ +M +L + Y
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I+ ++ + +A + +E + NI++ Y +++ A + ++
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DHRLITAAYNKLEEQGD 341
G P T+ L GY K G M E F+ RK + D + L +
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMG---EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++ A LL + R G+ E+ Y +L+ Y K G +
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 167/380 (43%), Gaps = 10/380 (2%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+A+Q ++ F P K R +C+ LLH + + K+ + + + M G Y
Sbjct: 78 EAIQCFSKMKRFRVFP-KTR---SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 133
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N M++ G ++ + +E+K + PD VTYN + + F E+K
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+PD I+Y+ L + + K +EM+ + N V+YS+L+ + G +
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 253
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
++ + M + N+ YT +I + K+G A + +E + + L+
Sbjct: 254 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ +++ AE + ++ T G+ P ++ L G++K M++ LE + G R
Sbjct: 314 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG--RGI 371
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK--MPLI 379
PD L L I+ A+ ++ ++ G ++ IY +L+ Y K+G L
Sbjct: 372 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 431
Query: 380 IVERMQKDNVQMDAETQKVL 399
+++ M++ ++++ T VL
Sbjct: 432 LLDEMKELDIEVTVVTFCVL 451
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 4/327 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ ++ EAE L KM G + YN +++ ++ +D+ ++L EL
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD++ Y ++ S E A+ E+K+ I + + Y+TL Y K P
Sbjct: 367 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA-KMNDAEYTC 224
+ L EM++ V + L+ + + + ++ + F + N A +T
Sbjct: 427 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 486
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L K + E A ++++ D L+ + + A + +++ G
Sbjct: 487 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 546
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+K + L WG Q++K ++ IG PD L + K E G ID
Sbjct: 547 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG--EGIHPDEVLCISVLKKHYELGCIDE 604
Query: 345 AEHLLVTLRNAGHVSTEIYNSLLRTYA 371
A L L ++++ N+L Y+
Sbjct: 605 AVELQSYLMKHQLLTSDNDNALPNIYS 631
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 14/301 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
++ + ++ I G L++ Q ++K+ P + N L A + ++ F ++
Sbjct: 63 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
P +Y+ + K E A +EM+ R + V Y+S++ + +G D
Sbjct: 123 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 182
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-- 259
+ + +++M + + + Y +I+ K G+ Y E + G+ PN+
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK-----GNGLKPNVVS 237
Query: 260 ---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
L+ A+ ++ A FY + G+ P T+ L K G + + +
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
+W + TA + L + + AE L + AG + + YN+L+ + KA
Sbjct: 298 QVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355
Query: 376 M 376
M
Sbjct: 356 M 356
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 72/406 (17%), Positives = 156/406 (38%), Gaps = 46/406 (11%)
Query: 30 ARENFFENLPDKMRG--PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
A FE + K RG PDT + +++ + + + + E+M + + YN
Sbjct: 148 AARGLFEEM--KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 205
Query: 86 MLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++N + G+L + +E+K N P+VV+Y+ + A + + A K ++++++
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 265
Query: 145 IDPDWISYSTLTSLYIKM-----------------------------------ELPEKAA 169
+ P+ +Y++L K+ E ++A
Sbjct: 266 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 325
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+M+ N +Y++L+ + D L + ++ K + Y I L
Sbjct: 326 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 385
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
L + E A+ + +E + + + L+ AY + + I+
Sbjct: 386 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 445
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ +L G K + K ++ F + I + + + TA + L + ++ A L
Sbjct: 446 VTFCVLIDGLCKNKLVSKAVDYFNR-ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 504
Query: 350 VTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
+ G V Y SL+ K G + L + ++M + +++D
Sbjct: 505 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 550
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +LL+ + Q + EA +L++ M+E G + YN ++N N L+ ++ +
Sbjct: 687 TLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGM 746
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK D VTYN ++ + A + ++ K KIDP+ I ++ L ++K
Sbjct: 747 EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 806
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A KEM +R+ N + Y+SL++ + G + ++ M+S + Y +
Sbjct: 807 LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL 866
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ K E ++ E GD N L+ Y +L +A+ +NR+V G+
Sbjct: 867 ITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 926
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ +L G++EK L
Sbjct: 927 PPDIVTYNILLDCLCNNGKIEKAL 950
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 131/300 (43%), Gaps = 10/300 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +LLH + + +A +L+ M + G+ + YN +++ NG ++ ++L E+
Sbjct: 137 TFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM 196
Query: 107 KKNT--SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K + D+VTYN L + A + ++ K +I+PD +++ L ++K
Sbjct: 197 EKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGN 256
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A K+M + + N V Y+SL++ G + + M S N Y
Sbjct: 257 LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNT 316
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I+ K E ++ GD N L+ Y +L +A+ ++ +V+ G
Sbjct: 317 LINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECF------KKAIGSVRKWVPDHRLITAAYNKLEE 338
+ P T +L G G++ + F +K +G V + H L A +K+EE
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKA--DKVEE 434
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 132/298 (44%), Gaps = 7/298 (2%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P +VT L N + A + + ++P+ + Y+T+ + K
Sbjct: 677 MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDL 736
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A MEK+ + V Y++L+S N G + R+ + M+ N +T +
Sbjct: 737 NNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 796
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + VK G +A+N+Y E S + N L+ + + +L A+ ++ +V+KG
Sbjct: 797 IDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGC 856
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K ++E ++ F + + + V D + + G ++ A
Sbjct: 857 FPDVVTYNTLITGFCKSKRVEDGMKLFCEM--THQGLVGDAFTYNTLIHGYCQAGKLNVA 914
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ + + + G V +I YN LL GK+ L++VE +QK+ + +D T ++
Sbjct: 915 QKVFNRMVDCG-VPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
++ F+ + K PD T + L+ + ++K+ + L +M+ G + YN +++
Sbjct: 845 KHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHG 904
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+L+ ++ + PD+VTYN+ L + E A +L+K ++D D
Sbjct: 905 YCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I+Y+ + + + ++A + + ++ + + +AY +++S G + E ++
Sbjct: 965 IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCT 1024
Query: 209 KM 210
+M
Sbjct: 1025 RM 1026
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P +VT+ L +N A + K+ +P+ + Y+TL K
Sbjct: 127 MKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDV 186
Query: 166 EKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
A L EMEK+ + V Y++LL+ G + RI + M + +T
Sbjct: 187 NIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTA 246
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I + VK G ++A+ +Y + S + N L+ +L A+ ++ + +KG
Sbjct: 247 LIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG 306
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
P T+ L G+ K ++E ++ F++
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/222 (18%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+ +++ ++ G L + + +E ++++ P+++TYN + Q A+ F +
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
PD ++Y+TL + + K + E EM + + Y++L+ Y G +
Sbjct: 853 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLN 912
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++ +M+ + Y ++ L G+ EKA + ++ + D NI++
Sbjct: 913 VAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++++ A + L KG+K + + G + G
Sbjct: 973 QGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 57/250 (22%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+AL+ ++V+ EA+ L ++M L YN ++N + G+L M +
Sbjct: 794 TALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853
Query: 108 KNTSPDVVTYNLWLAA-CASQNDKE----------------------------------T 132
K PDVVTYN + C S+ ++
Sbjct: 854 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNV 913
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A+K F + + PD ++Y+ L EKA +++++K + + Y+ ++
Sbjct: 914 AQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQ 973
Query: 193 LYTNMGYKDEVLRIWKKMMSLF---AKMNDAEYTCVISSLVKLG---------------E 234
M D+V W SL K++ Y +IS L + G
Sbjct: 974 ---GMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030
Query: 235 FEKAENIYDE 244
F +E IYDE
Sbjct: 1031 FMPSERIYDE 1040
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/247 (17%), Positives = 97/247 (39%), Gaps = 3/247 (1%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A F E+ +++ P + ++ + + KM + +ME + +++ L
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + L + KMM L + + +++ + F++A ++ D +
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ + N ++ L A + + KGI T+ L G G+
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV-TLRNAGHVSTEIYNSLLRT 369
+ + RK P+ TA + ++G++ A++L +R + H + YNSL+
Sbjct: 777 LLRDMVK--RKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834
Query: 370 YAKAGKM 376
+ G++
Sbjct: 835 FCIQGRL 841
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 143/330 (43%), Gaps = 4/330 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+ +Y + EA +M M++ G YN ++N G+ + +L E
Sbjct: 155 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 214
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L SPD TYN L +++ A++ F E+ + + PD +S+S+L +++ +
Sbjct: 215 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHL 274
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A ++M+K + V Y+ L+ Y G E L+I +M+ ++ Y +
Sbjct: 275 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 334
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K A+ ++DE D L+ + + A S + + + I
Sbjct: 335 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 394
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP + L G+ K G+MEK E + I RK P+H N G + A
Sbjct: 395 KPDIVAYNTLIDGFCKVGEMEKASELWDGMIS--RKIFPNHITYGILINAYCSVGHVSEA 452
Query: 346 EHLLVTLRNAGHVSTEIY-NSLLRTYAKAG 374
L + G T + N++++ Y ++G
Sbjct: 453 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 482
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 7/305 (2%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + L+H Y +N EA + ++M E G + + YN +LN L ++
Sbjct: 291 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL 350
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+ ++ PD T+ + + A F + + I PD ++Y+TL + K
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCK 410
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ EKA+ M R N + Y L++ Y ++G+ E R+W M+ K
Sbjct: 411 VGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVT 470
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
VI + G+ KA+ + D N L+ ++ + ++ A + N++
Sbjct: 471 CNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKME 530
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQG 340
+G+ P T+ ++ G+ ++G+M++ +K I K + PD TA N Q
Sbjct: 531 KEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMI---EKGINPDRSTYTALINGHVTQD 587
Query: 341 DIDGA 345
+++ A
Sbjct: 588 NLNEA 592
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 143/346 (41%), Gaps = 30/346 (8%)
Query: 51 LLHSYVQNKKSAEAEALMEKM-----------------SECGFLKCP---LPYNHMLNLY 90
++H +V++++ ++A+AL+ +M S CG C L ++ ++ Y
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCG--NCGTNNLVFDLLIRTY 58
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +L + + + L+ K + N L + E A + E+ ++ I+ +
Sbjct: 59 VQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNV 118
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ + + + K + + L EME + V Y++L+ Y G +E I
Sbjct: 119 YTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M K + Y +I+ L K G + +A+ I E +I + D N LL R+
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHR 327
A+ + ++ +G+ P ++ L + + +++ L F+ K G VPD+
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG----LVPDNV 294
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ T + G++ A + + G V I YN++L K
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 340
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ ++ Y ++ S++A+ + +M G + YN ++N ++ +DK + ++
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PD++TYN+ + Q + AE ++ + I+PD +Y+ L + ++ +
Sbjct: 530 EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNL 589
Query: 166 EKAATTLKEMEKR 178
+A EM +R
Sbjct: 590 NEAFRFHDEMLQR 602
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + L+ + + + +A L + M + Y ++N Y S G + + ++
Sbjct: 396 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++K P +VT N + D A++ + + PD ISY+TL + +++
Sbjct: 456 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVR 515
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +KA + +MEK + + Y+ +++ + G E + +KM+ + +
Sbjct: 516 EDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRST 575
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
YT +I+ V +A +DE
Sbjct: 576 YTALINGHVTQDNLNEAFRFHDE 598
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QE 105
T L+++Y +EA L + M E G + N ++ Y +G K + L +
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFL---ELKKTKIDPDWISYSTLTSLYIKM 162
+ K +PD ++YN + +++ +KAFL +++K + PD I+Y+ + + + +
Sbjct: 495 IAKGVAPDHISYNTLINGFVREDN---MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQ 551
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++A L++M ++ +R Y++L++ + +E R +M+
Sbjct: 552 GRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEML 600
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 168/370 (45%), Gaps = 19/370 (5%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALM 68
+R + R+A+A AL D GPD +AL+ ++ + + +A A+
Sbjct: 130 IRVMARAGRLAEASALL------------DAAPGPDAGAYTALVSAFSRAGRFRDAVAVF 177
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
+M + G + YN +L++Y +V +++ +K++ +PD TYN ++ C
Sbjct: 178 RRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRR 237
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ + A + F E+K + +PD +++++L +Y K ++A ++EME+ C + V
Sbjct: 238 RALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVT 297
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+SL+S Y G ++ + + ++M K + YT +IS L + G+ + A YDE
Sbjct: 298 YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 357
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ N L+ + R + + ++ + G P TW L + + G
Sbjct: 358 RNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDS 417
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNS 365
+V FK+ + ++P+ + + G D A + + AG + YN+
Sbjct: 418 EVSGVFKEMKKA--GYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 475
Query: 366 LLRTYAKAGK 375
+L A+ G+
Sbjct: 476 VLSALARGGR 485
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 17 RQRVAQAQALQT--RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSEC 74
R+R +A Q + + FE PDK+ T ++LL Y + ++ EA ++++M
Sbjct: 236 RRRALYKEAAQVFDEMKASGFE--PDKV----TFNSLLDVYGKARRHDEAIEVIQEMERV 289
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAAC--ASQNDKE 131
G + YN +++ Y+ +G L++ + QE++ K PDVVTY ++ A + D
Sbjct: 290 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 349
Query: 132 TAE---------------------------------KAFLELKKTKIDPDWISYSTLTSL 158
E F E + PD ++++TL ++
Sbjct: 350 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 409
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ + L + + KEM+K R Y SL+S Y+ G D ++I+K+MM +
Sbjct: 410 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPD 469
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ Y V+S+L + G +E+AE ++ E E D + LL AY N +L+ ++ +
Sbjct: 470 VSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 529
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHRLITAAYNKL 336
+ ++ I+P W + T L ++ + E +KA +R + D ++ A +
Sbjct: 530 DIYSERIEP--HNWLVKTL-VLVNSKVNNLAEA-EKAFLELRQKRCSLDINVLNAMVSIY 585
Query: 337 EEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAG 374
+ + E +L ++ +A ++S YNSL+ Y++ G
Sbjct: 586 GKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 624
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 50/347 (14%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ A ++ R + + A+ R F +PD + T + LL + QN +E
Sbjct: 368 YNALIKMHGVRGKFPEMMAVFDEFRSAGF--VPDIV----TWNTLLAVFGQNGLDSEVSG 421
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
+ ++M + G++ Y +++ Y G D Q+ + + + PDV TYN L+A A
Sbjct: 422 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALA 481
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK------------------ 167
E AEK F E+++ PD SYS+L Y + +K
Sbjct: 482 RGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW 541
Query: 168 -----------------AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
A E+ ++ C + ++++S+Y K+ ++R +K+
Sbjct: 542 LVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYG----KNRMVRKVEKI 597
Query: 211 MSLFAK----MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+SL + ++ A Y ++ +LG+ EK ENI E +S D N ++ AY
Sbjct: 598 LSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGR 657
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ Q++ A ++ + G+KP T+ + Y+ E+ +E +
Sbjct: 658 KGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR 704
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 11/268 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + + +AE L +M E Y+ +L+ Y + +LDK
Sbjct: 468 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK---- 523
Query: 103 LQELKKNTSPDVVTYNLWLAAC-----ASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ L + + + + WL + N+ AEKAFLEL++ + D + + S
Sbjct: 524 MKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVS 583
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+Y K + K L M++ + Y+SL+ +Y+ +G ++ I ++ S +
Sbjct: 584 IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRP 643
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y VI + + G+ ++A ++ E + D NI + +Y++ + E A
Sbjct: 644 DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELV 703
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+VT+G KP T+ + GY + G++
Sbjct: 704 RYMVTQGCKPNERTYNSIVEGYCRNGKL 731
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L++S V N AE L + C L N M+++Y N + KV ++L +K++
Sbjct: 548 LVNSKVNNLAEAEKAFLELRQKRCSLDINVL--NAMVSIYGKNRMVRKVEKILSLMKESA 605
Query: 111 -SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ TYN + + D E E E+K + + PD SY+T+ Y + ++A+
Sbjct: 606 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEAS 665
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM+ + + V Y+ + Y + +E + + + M++ K N+ Y ++
Sbjct: 666 RLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 725
Query: 230 VKLGEFEKAE 239
+ G+ A+
Sbjct: 726 CRNGKLTDAK 735
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 168/370 (45%), Gaps = 19/370 (5%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALM 68
+R + R+A+A AL D GPD +AL+ ++ + + +A A+
Sbjct: 148 IRVMARAGRLAEASALL------------DAAPGPDAGAYTALVSAFSRAGRFRDAVAVF 195
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
+M + G + YN +L++Y +V +++ +K++ +PD TYN ++ C
Sbjct: 196 RRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRR 255
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ + A + F E+K + +PD +++++L +Y K ++A ++EME+ C + V
Sbjct: 256 RALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVT 315
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+SL+S Y G ++ + + ++M K + YT +IS L + G+ + A YDE
Sbjct: 316 YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ N L+ + R + + ++ + G P TW L + + G
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDS 435
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNS 365
+V FK+ + ++P+ + + G D A + + AG + YN+
Sbjct: 436 EVSGVFKEMKKA--GYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 493
Query: 366 LLRTYAKAGK 375
+L A+ G+
Sbjct: 494 VLSALARGGR 503
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 17 RQRVAQAQALQT--RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSEC 74
R+R +A Q + + FE PDK+ T ++LL Y + ++ EA ++++M
Sbjct: 254 RRRALYKEAAQVFDEMKASGFE--PDKV----TFNSLLDVYGKARRHDEAIEVIQEMERV 307
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAAC--ASQNDKE 131
G + YN +++ Y+ +G L++ + QE++ K PDVVTY ++ A + D
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 367
Query: 132 TAE---------------------------------KAFLELKKTKIDPDWISYSTLTSL 158
E F E + PD ++++TL ++
Sbjct: 368 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 427
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ + L + + KEM+K R Y SL+S Y+ G D ++I+K+MM +
Sbjct: 428 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPD 487
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ Y V+S+L + G +E+AE ++ E E D + LL AY N +L+ ++ +
Sbjct: 488 VSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHRLITAAYNKL 336
+ ++ I+P W + T L ++ + E +KA +R + D ++ A +
Sbjct: 548 DIYSERIEP--HNWLVKTL-VLVNSKVNNLAEA-EKAFLELRQKRCSLDINVLNAMVSIY 603
Query: 337 EEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAG 374
+ + E +L ++ +A ++S YNSL+ Y++ G
Sbjct: 604 GKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 50/347 (14%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ A ++ R + + A+ R F +PD + T + LL + QN +E
Sbjct: 386 YNALIKMHGVRGKFPEMMAVFDEFRSAGF--VPDIV----TWNTLLAVFGQNGLDSEVSG 439
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
+ ++M + G++ Y +++ Y G D Q+ + + + PDV TYN L+A A
Sbjct: 440 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALA 499
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK------------------ 167
E AEK F E+++ PD SYS+L Y + +K
Sbjct: 500 RGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW 559
Query: 168 -----------------AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
A E+ ++ C + ++++S+Y K+ ++R +K+
Sbjct: 560 LVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYG----KNRMVRKVEKI 615
Query: 211 MSLFAK----MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+SL + ++ A Y ++ +LG+ EK ENI E +S D N ++ AY
Sbjct: 616 LSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGR 675
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ Q++ A ++ + G+KP T+ + Y+ E+ +E +
Sbjct: 676 KGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR 722
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 11/268 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + + +AE L +M E Y+ +L+ Y + +LDK
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK---- 541
Query: 103 LQELKKNTSPDVVTYNLWLAAC-----ASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ L + + + + WL + N+ AEKAFLEL++ + D + + S
Sbjct: 542 MKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVS 601
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+Y K + K L M++ + Y+SL+ +Y+ +G ++ I ++ S +
Sbjct: 602 IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRP 661
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y VI + + G+ ++A ++ E + D NI + +Y++ + E A
Sbjct: 662 DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELV 721
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+VT+G KP T+ + GY + G++
Sbjct: 722 RYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L++S V N AE L + C L N M+++Y N + KV ++L +K++
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVL--NAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 111 -SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ TYN + + D E E E+K + + PD SY+T+ Y + ++A+
Sbjct: 624 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEAS 683
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM+ + + V Y+ + Y + +E + + + M++ K N+ Y ++
Sbjct: 684 RLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Query: 230 VKLGEFEKAE 239
+ G+ A+
Sbjct: 744 CRNGKLTDAK 753
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 155/356 (43%), Gaps = 9/356 (2%)
Query: 27 QTRARE--NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPL 81
+T+ +E F+ + +K PD T S ++ + K EA E L KM E G +
Sbjct: 91 ETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTV 150
Query: 82 PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++N + +++ ++L+E+ K PD +TYN L+ A++ F +
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSM 210
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
PD ++Y+ L K ++A K++ + + V Y+S+L
Sbjct: 211 PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 270
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
DE ++KKM++ N A Y+ V+S + + + A + +E I D NIL
Sbjct: 271 DEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 330
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
L N ++ A ++ +V G P ++ ++ G K ++ F + I R
Sbjct: 331 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI--ER 388
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
K VPD + L + G +D A+ LL + +G + YN+L+ K G+
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 13/333 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L S+ + K + L E+M + G + YN +++ Y G++D+ ++ +E+
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM-EL 164
P + TYN L A + + A + F + + +PD ++YST+ S K ++
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE-VLRIWKKMMSLFAKM---NDA 220
E +M +R C N VAY++L+ N KDE + R +K + + +K ++
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALI----NGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y ++S L ++G+ +A+ +D S + D N LL A + + A + +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
+ KG P T+ + G +K M++ E FKK + S P+ + +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS--GCAPNGATYSIVLSGHCRAK 303
Query: 341 DIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+D A +L + G V + YN LL K
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 336
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 134/304 (44%), Gaps = 14/304 (4%)
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q L SPD + YN+ + A + + A + + E+ ++P +Y++L + + K
Sbjct: 33 QMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKET 92
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR-IWKKMMSLFAKMNDAEY 222
++A K M ++ + V YS+++S G E L ++ KM+ N Y
Sbjct: 93 KMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAY 152
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I+ L K E+A + +E S D N +L+ ++ A+ F++ + +
Sbjct: 153 NALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 212
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK----LEE 338
+G P + L K+G+ ++ ++ FK I + ++PD T YN L
Sbjct: 213 RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI--AKGYMPD----TVTYNSILLGLAR 266
Query: 339 QGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAET 395
+ ++D AE + + +G + Y+ +L + +A K+ ++E M K D T
Sbjct: 267 KSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVT 326
Query: 396 QKVL 399
+L
Sbjct: 327 YNIL 330
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 109/271 (40%), Gaps = 4/271 (1%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SP+ T+ + L + Q K F ++ I PD I Y+ L Y K ++
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM + Y+SLL+ + E + ++K M + + Y+ +IS
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 228 SLVKLGEFEKA-ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K G+ +A E ++ + + + N L+ +E A + +KG
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ + G + G++ + + F R + PD + L ++G D A
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSM--PSRGYSPDVVAYNGLLDALYKEGKTDEAM 239
Query: 347 HLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
L + G++ T YNS+L A+ M
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARKSNM 270
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S +L + + KK +A ++E+MS+ G + + YN +L+ +DK ++ +
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
N +PD+V+Y++ L N A F + + K+ PD ++++ L K
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++A L +M C + VAY++L++ G + R+ + M
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 455
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 3/211 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+++ K PDT + ++L + EAE + +KM G Y+ +L+ +
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++D ++L+E+ K PDVVTYN+ L N + A + F + PD +
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 360
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SYS + + K A M +R + V ++ L+ G DE + +M
Sbjct: 361 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ Y +++ L K G +A+ +
Sbjct: 421 TCSGCAPDYVAYNTLMNGLRKQGRHIQADRL 451
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 158/357 (44%), Gaps = 6/357 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
+C+ LLH + + K+ + + M G YN M++ G ++ + +E+
Sbjct: 100 SCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM 159
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD VTYN + + F E+K +PD I+Y++L + + K
Sbjct: 160 KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKL 219
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
K +EM++ + N V+YS+L+ + + ++ + M + N+ YT +
Sbjct: 220 PKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSL 279
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ + K+G A + +E + + L+ + +++ AE + ++VT G+
Sbjct: 280 VDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGV 339
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P ++ L G++K M++ LE + G R PD L L I+ A
Sbjct: 340 IPNLASYNALIHGFVKAKNMDRALELLNELKG--RGIQPDLLLYGTFIWGLCGLEKIEAA 397
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK--MPLIIVERMQKDNVQMDAETQKVL 399
+ ++ ++ G +T IY +L+ Y K+G L ++E MQ+ + ++ T VL
Sbjct: 398 KVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVL 454
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 129/301 (42%), Gaps = 4/301 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ ++ EAE L KM G + YN +++ ++ +D+ ++L EL
Sbjct: 310 TYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 369
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD++ Y ++ E A+ E+++ I + + Y+TL Y K P
Sbjct: 370 KGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNP 429
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA-KMNDAEYTC 224
+ L+EM++ V + L+ + + + +M + F + N A YT
Sbjct: 430 TEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTA 489
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L K + + A ++++ D L+ + + + A + +++ G
Sbjct: 490 MIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG 549
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+K + L WG+ + Q++K ++ IG + +PD L K E G ID
Sbjct: 550 MKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIG--EEILPDEVLCIGVLKKHYELGCIDE 607
Query: 345 A 345
A
Sbjct: 608 A 608
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 11/161 (6%)
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ + S L+ LG E+A + + + R N LL + + + + F+ ++
Sbjct: 66 FDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 125
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL-EEQG 340
G KP T+ ++ K+G +E F++ R +PD T YN + + G
Sbjct: 126 GAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM--KFRGLIPD----TVTYNSMIDGYG 179
Query: 341 DIDGAEHLLVTLRNAGHVSTE----IYNSLLRTYAKAGKMP 377
+ + + +S E YNSL+ + K+GK+P
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLP 220
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 147/339 (43%), Gaps = 15/339 (4%)
Query: 46 DTCSALLHSY-------VQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
+ C+ +H+Y +NKK EA ALMEK++ G YN +LN G+L++
Sbjct: 253 NGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 312
Query: 99 VPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+L+++ N +PDVVTY + + A K F E+ + D + Y+ L
Sbjct: 313 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIR 372
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++ +A++ K M C + V S+++ + G +RI+K M +
Sbjct: 373 GLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 432
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
N+ Y+ +I L K + + A + + + T D NIL+ +E A +F+
Sbjct: 433 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 492
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
+ ++ G KP T+ +L G K G + A G + + ++ + L
Sbjct: 493 DEMLEAGCKPDVYTYNILISGLCKAGNTD-------AACGVLDDMSSSRFVYSSLVDGLC 545
Query: 338 EQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ G ++G L + +G +++ L+ KA ++
Sbjct: 546 KSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRV 584
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 110/283 (38%), Gaps = 50/283 (17%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S ++ + + A + + M G + Y+ +++ ++D +M
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 456
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L ++KK +PD +TYN+ + D E A F E+ + PD +Y+ L S K
Sbjct: 457 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCK 516
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----------- 210
+ A L +M +R YSSL+ G + ++ +M
Sbjct: 517 AGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTR 571
Query: 211 ----------------MSLFAKM------NDAEYTCVISSLVKLGEFEKAENIYDE---- 244
+SLF + + Y +IS+L+K G+ + + +Y E
Sbjct: 572 TRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRW 631
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
W+ D N LL I N+++ A +Y + +G P
Sbjct: 632 WKP-----DRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 13/241 (5%)
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-----TCRKNRVAYSSLLSLYTNM 197
T PD +++ L + Y PE+A ++EME+ + + + + L +
Sbjct: 148 TIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVL 207
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
D + + M ++ A ++ +I+ LVK G +A ++ E + T D
Sbjct: 208 AAMDHFEAVRRSM-----PVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTY 262
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
++ +++ A + ++ G P T+ L G K G++E+ ++ +K +
Sbjct: 263 TAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 322
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ PD T+ + L ++ A L + + G + T Y +L+R + GK+
Sbjct: 323 N--GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKI 380
Query: 377 P 377
P
Sbjct: 381 P 381
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 143/330 (43%), Gaps = 4/330 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+ +Y + EA +M M++ G YN ++N G+ + +L E
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L SPD TYN L +++ A++ F E+ + + PD +S+S+L +++ +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A ++M+K + V Y+ L+ Y G E L+I +M+ ++ Y +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K A+ ++DE D L+ + + A S + + + I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP + L G+ K G+MEK E + I RK P+H N G + A
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMIS--RKIFPNHITYGILINAYCSVGHVSEA 300
Query: 346 EHLLVTLRNAGHVSTEIY-NSLLRTYAKAG 374
L + G T + N++++ Y ++G
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 330
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 9/299 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + LL + +EA+ + +M G + + ++ ++ ++ N LD+
Sbjct: 69 PDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVY 128
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++KK PD V Y + + + A K E+ + D I+Y+T+ + K
Sbjct: 129 FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 188
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++ A EM +R + +++L+ + G + L ++ M K +
Sbjct: 189 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 248
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I K+GE EKA ++D S + IL+ AY + + A ++ ++
Sbjct: 249 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 308
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
KGIKP T + GY + G K E + I + PDH +YN L G
Sbjct: 309 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI--AKGVAPDH----ISYNTLINDG 361
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 148/329 (44%), Gaps = 6/329 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL--DKVPQMLQEL 106
+A++ Y ++ + + L++ M + +N ++N +G L +L E+
Sbjct: 67 NAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEV 126
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PDV+TYN ++AC+ ++ + A F E+ ++ PD +Y+ + S++ +
Sbjct: 127 RQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKA 186
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A +E+ ++ + + V Y+SLL + G D V R+ ++++ K + Y +
Sbjct: 187 QDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTM 246
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G + A +YDE ++ T D +L+ + +++ A + G+
Sbjct: 247 IHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGL 306
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP T+ L Y K G+ E+ + F + S K PD + + GD+
Sbjct: 307 KPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVK--PDRLAYLVMLDIIARSGDMRKL 364
Query: 346 EHLLVTLRNAGH-VSTEIYNSLLRTYAKA 373
L T+ N G+ +Y +L AK
Sbjct: 365 MALYQTMMNDGYRPDNALYQVMLAALAKG 393
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L +K PD T ++LL+++ + + E + E++ GF K + YN M+++
Sbjct: 190 ERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHM 249
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+LD + E++ +PD VTY + + + + A K E+ + P
Sbjct: 250 YGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPT 309
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++S L Y K E+A T M + +R+AY +L + G +++ +++
Sbjct: 310 LVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQ 369
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
MM+ + ++A Y ++++L K E+++ E + + E + V +IL+ A
Sbjct: 370 TMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKA 424
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 11/271 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKM--SECGFLKCPL-PYNHMLNLYISNGQLDKV 99
PD T + L+ + Q +A A+ E+M SEC + L YN M++++ G+
Sbjct: 133 PDVITYNTLISACSQGSNLDDAVAVFEEMMASEC---RPDLWTYNAMVSVHGRCGKAQDA 189
Query: 100 PQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+M +EL +K PD VTYN L A A + D +T E+ EL + D I+Y+T+ +
Sbjct: 190 ERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHM 249
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y KM + A EM C + V Y+ L+ M + ++ ++M K
Sbjct: 250 YGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPT 309
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN-QLEMAESFY 277
++ +I + K G E+A + + SG R+ +++ I R+ + + Y
Sbjct: 310 LVTFSALICAYAKGGRREEAVRTFSHMVA-SGVKPDRLAYLVMLDIIARSGDMRKLMALY 368
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
++ G +P ++++ K + +++
Sbjct: 369 QTMMNDGYRPDNALYQVMLAALAKGNEYDEI 399
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 3/234 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A++ + + K+ +AE + ++ E GF + YN +L + G D V ++
Sbjct: 168 PDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERV 227
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+EL + D +TYN + + A + E++ PD ++Y+ L K
Sbjct: 228 CEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGK 287
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
M+ A L+EM + V +S+L+ Y G ++E +R + M++ K +
Sbjct: 288 MDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLA 347
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
Y ++ + + G+ K +Y + D + ++LAA N+ + E+
Sbjct: 348 YLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEA 401
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 149/354 (42%), Gaps = 12/354 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+AL+H+Y ++ A A+ + M E G L N M+ I +G+LD++ ++QEL+
Sbjct: 628 NALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQD 687
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
T L L A D K + +K+ P+ Y ++ SL + +
Sbjct: 688 MGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRD 747
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ EME+ + ++LL +YT G D+ + ++ ++ + N+ Y +I
Sbjct: 748 VELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIV 807
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ E+ + +E T LLAA E AE + + +KG +
Sbjct: 808 MYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRL 867
Query: 288 CYTTWELLTWGY---LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ + +L Y + E++L K+ + + ++ +Y G D
Sbjct: 868 NRSLYHMLMKIYRDACNHSKAEQLLASMKE--DGIEPTIATMHILMTSYGT---AGHPDE 922
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVE--RMQKDNVQMDAET 395
AE +L +L+++ VST Y+++ Y K G L I + M+ D V+ D +
Sbjct: 923 AEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQV 976
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 134/336 (39%), Gaps = 17/336 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T SAL+ +Y + + EA M G L Y ML++ +G + K+ + Q +
Sbjct: 312 TFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTM 371
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMEL 164
+ PD Y + LAA A N+ + E +++ +++P +S S+ IK E
Sbjct: 372 MNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVS-----SILIKAEC 426
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ A LK+ + + + S+L Y G +E L + + + + C
Sbjct: 427 ISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISEC 486
Query: 225 VISSLVKLGEFEKAENIYDEWESI---SGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
I L K + A Y + + S D + L+ A ++ +
Sbjct: 487 SIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQ 546
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
GI+P +E + Y K G E + +A+ S ++++ +E G
Sbjct: 547 FIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISL----NILSSRVTMIEAYGK 602
Query: 342 I---DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
I AE+ + L+ + I+N+L+ YA++G
Sbjct: 603 IKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESG 638
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 17/292 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L ++ + E + M E G+L Y M++L N + V M+ E+
Sbjct: 696 TVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEM 755
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD+ N L + + + + + + ++P+ +Y+TL +Y + P
Sbjct: 756 ERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRP 815
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ T L EM K+ +Y SLL+ ++ ++++++ S ++N + Y +
Sbjct: 816 EEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHML 875
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVT 282
+ KAE + S+ G +P + +IL+ +Y + AE N L +
Sbjct: 876 MKIYRDACNHSKAEQL---LASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKS 932
Query: 283 KGIKPCYTTWELLTWGYLKKGQ----MEKVLECFKKAIGSVRKWVPDHRLIT 330
++ + + YLK G + K+LE KA G PDH++ T
Sbjct: 933 SSLEVSTLPYSTVFNAYLKNGDYNLGITKLLE--MKADGV----KPDHQVWT 978
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 112/322 (34%), Gaps = 111/322 (34%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+N M+ +Y +G+ D V Q+L ++
Sbjct: 66 FNAMMGVYARSGRFDDVRQLLDAMRGQ--------------------------------- 92
Query: 143 TKIDPDWISYSTLTSLYIKMEL--PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+++PD +S++TL + K P A L E+ + R + + Y++L+S +
Sbjct: 93 -ELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNL 151
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D+ + ++++MM+ + + Y ++S + G KA++
Sbjct: 152 DDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG---KAQD-------------------- 188
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
AE + LV KG KP T+ L + + K
Sbjct: 189 ------------AERMFRELVEKGFKPDAVTYNSLLYAFAK------------------- 217
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI 379
+GD D E + L AG I YN+++ Y K G++ L
Sbjct: 218 ------------------EGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLA 259
Query: 380 --IVERMQKDNVQMDAETQKVL 399
+ + M+ DA T VL
Sbjct: 260 LGLYDEMRALGCTPDAVTYTVL 281
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 167/380 (43%), Gaps = 10/380 (2%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+A+Q ++ F P K R +C+ LLH + + K+ + + + M G Y
Sbjct: 210 EAIQCFSKMKRFRVFP-KTR---SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N M++ G ++ + +E+K + PD VTYN + + F E+K
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+PD I+Y+ L + + K +EM+ + N V+YS+L+ + G +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
++ + M + N+ YT +I + K+G A + +E + + L+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ +++ AE + ++ T G+ P ++ L G++K M++ LE + G R
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG--RGI 503
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LI 379
PD L L I+ A+ ++ ++ G ++ IY +L+ Y K+G L
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 380 IVERMQKDNVQMDAETQKVL 399
+++ M++ ++++ T VL
Sbjct: 564 LLDEMKELDIEVTVVTFCVL 583
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 126/304 (41%), Gaps = 4/304 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ ++ EAE L KM G + YN +++ ++ +D+ ++L EL
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD++ Y ++ S E A+ E+K+ I + + Y+TL Y K P
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA-KMNDAEYTC 224
+ L EM++ V + L+ + + + ++ + F + N A +T
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L K + E A ++++ D L+ + + A + +++ G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+K + L WG Q++K ++ IG PD L + K E G ID
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH--PDEVLCISVLKKHYELGCIDE 736
Query: 345 AEHL 348
A L
Sbjct: 737 AVEL 740
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 14/301 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
++ + ++ I G L++ Q ++K+ P + N L A + ++ F ++
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
P +Y+ + K E A +EM+ R + V Y+S++ + +G D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-- 259
+ + +++M + + + Y +I+ K G+ Y E + G+ PN+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK-----GNGLKPNVVS 369
Query: 260 ---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
L+ A+ ++ A FY + G+ P T+ L K G + + +
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
+W + TA + L + + AE L + AG + + YN+L+ + KA
Sbjct: 430 QVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 376 M 376
M
Sbjct: 488 M 488
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 75/431 (17%), Positives = 162/431 (37%), Gaps = 49/431 (11%)
Query: 8 GAQVRAQSYRQRV---AQAQALQTRARENFFENLPDKMRG--PDTCS--ALLHSYVQNKK 60
GA R + + + A FE + K RG PDT + +++ + + +
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM--KFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNL 119
+ E+M + + YN ++N + G+L + +E+K N P+VV+Y+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM----------------- 162
+ A + + A K ++++++ + P+ +Y++L K+
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 163 ------------------ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
E ++A +M+ N +Y++L+ + D L
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+ ++ K + Y I L L + E A+ + +E + + + L+ AY
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
+ + I+ T+ +L G K + K ++ F + I +
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR-ISNDFGLQA 611
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIV 381
+ + TA + L + ++ A L + G V Y SL+ K G + L +
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 382 ERMQKDNVQMD 392
++M + +++D
Sbjct: 672 DKMAEIGMKLD 682
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 184/435 (42%), Gaps = 56/435 (12%)
Query: 27 QTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKM-SECGFLKCP--L 81
Q + E+ ++P PD S +L+ + +N A ++E + + GF+ P +
Sbjct: 71 QVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIV 130
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N + N + LD+V + + K SP+VVTY+ W+ + + A K+F +K
Sbjct: 131 SFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMK 190
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS--------- 192
+ + P+ ++++ L Y K E A + KEM + N V Y++L+
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250
Query: 193 ----LYTNM----------------------GYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+Y+ M G D ++ KM++ +++ Y +I
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S L G+ ++A I ++ E D + ++ AY +++ A + Y++L+ +G +
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Query: 287 PCYTTWELLTWGYLKKGQMEK--VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P + G K GQ+ + V C +KA + + T + L ++GD
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEKA---------NDVMYTVLIDALCKEGDFIE 421
Query: 345 AEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMD--AETQKVL 399
E L + AG V + +Y S + K G + + RM ++ + +D A T +
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 400 KITSEMPVSEVSSIF 414
+ S+ + E +F
Sbjct: 482 GLASKGLMVEARQVF 496
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 131/314 (41%), Gaps = 8/314 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T +AL+ + + + AE + +M E L Y +++ + G D + L +
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + D+ Y + ++ + A + +++K+ + PD + ++T+ + Y K
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A ++ +R + VA S+++ G E + + K ND YT +
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVL 409
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I +L K G+F + E ++ + D + +A + L A R+V +G+
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL 469
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ L +G KG M + + F + + S PD + E++G++ A
Sbjct: 470 LLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS--GISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 346 EHLLVTLRNAGHVS 359
LL+ ++ G V+
Sbjct: 528 SDLLLDMQRRGLVT 541
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 137/312 (43%), Gaps = 45/312 (14%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPL---PYNHMLNLYISNGQLDKV 99
PD + LL+ Y + K EAEAL+ +M E G CPL YN ++ Y +GQ ++
Sbjct: 58 PDAIFFNTLLNGYCEAGKMKEAEALVLEMKERG---CPLITSSYNTLIKGYGLDGQPEEA 114
Query: 100 PQMLQELKK--NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++LQE+ K N+ P+ T+N+ + A A + E A ++ + PD +SY+TL
Sbjct: 115 MKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQ 174
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM------- 210
L+ K+ P A + EM+ R N Y +++ Y G DE LR+ ++M
Sbjct: 175 LFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISP 234
Query: 211 ---------------------------MSLFAKMNDAE-YTCVISSLVKLGEFEKAENIY 242
M F D + + ++++ G ++A+ +
Sbjct: 235 TIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVL 294
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ D +IL+ Y + + E E+F N ++ + +KP T+ + GY
Sbjct: 295 LRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSL 354
Query: 303 GQMEKVLECFKK 314
QM+ + F++
Sbjct: 355 AQMDDAMRVFQE 366
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 44/325 (13%)
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFL--ELKKTKIDP 147
+S G +V L+ L+++ P TY L L++ S D E L ++++ + P
Sbjct: 1 MSRGDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLIS--DGRLGEGPLLLQQMEEDNVIP 58
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D I ++TL + Y + ++A + EM++R C +Y++L+ Y G +E +++
Sbjct: 59 DAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLL 118
Query: 208 KKMM-SLFAKMNDAEYTCVISS-----------------------------------LVK 231
++M + +K ND + +I + K
Sbjct: 119 QEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAK 178
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
LG+ AEN+ E +++ + R I++ YI Q++ + R+ GI P
Sbjct: 179 LGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAV 238
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L GY + + KV + FK K PD + N G ID A+ +L+
Sbjct: 239 FNHLVKGYSESMKPHKVDKVFKLMENFGVK--PDVQTFGLIMNAWCSTGLIDEAKAVLLR 296
Query: 352 LRNAG-HVSTEIYNSLLRTYAKAGK 375
++ Y+ L++ Y++ G+
Sbjct: 297 MKEYDLQPDVMAYSILVKGYSRQGR 321
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 169/411 (41%), Gaps = 58/411 (14%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQEL 106
LL + + K++ EA + L+ + E G + Y+ +L +GQ D + +M+ E
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SPDVV Y+ + + D A F E+ + I PD+++YS++ K +
Sbjct: 212 GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA L++M + N Y++L+ Y++ G E +R++K+M + + ++
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 227 SSLVKLGEFEKAENIYDE--------------------------------WESISGTG-- 252
SL K G+ ++A +++D ++ + G G
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 253 -DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D N+L+ AY N L+ A +N + G+KP T+ + + G+M+ +E
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
F + I + PD G + A+ L+ + N G H+ ++S++
Sbjct: 452 FNQMID--QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Query: 371 AKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEM 405
K G++ P +V M D + + +K L++ M
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 131/280 (46%), Gaps = 5/280 (1%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T S L+ S + K EA + + M+ G Y MLN Y + G L
Sbjct: 321 LPDVV----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376
Query: 98 KVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ + L +PD+ T+N+ + A A+ + A F E++ + PD ++Y T+
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ ++ + A +M + ++ AY L+ + G + + ++M+
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ ++ +I++L KLG A+NI+D ++ V ++L+ Y ++E A
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ +V+ GI+P + L GY K G++++ L F++ +
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 156/386 (40%), Gaps = 49/386 (12%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F+ + + PD T S+++H+ + + +AEA + +M G L YN+++ Y
Sbjct: 240 DLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGY 299
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLA------------------ACASQNDKE 131
S GQ + ++ +E+++++ PDVVT ++ + A QN
Sbjct: 300 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNV 359
Query: 132 TAEKAFLELKKTK-----------------IDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+ L TK I PD +++ L Y + +KA E
Sbjct: 360 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE 419
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + + V Y ++++ +G D+ + + +M+ + Y C+I G
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINR----NQLEMAESFYNRLVTKGIKPCYT 290
KA+ + E I G + + ++ IN ++ A++ ++ V G+ P
Sbjct: 480 LLKAKELISE---IMNNG-MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ +L GY G+MEK L F + + P+ + N + G ID L
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSA--GIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 351 TLRNAG-HVSTEIYNSLLRTYAKAGK 375
+ G ST +YN ++ +AG+
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGR 619
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 116/296 (39%), Gaps = 38/296 (12%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+ ++ + ++G L K +++ E+ N D+V ++ + A+ F
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P + YS L Y + EKA M N V Y +L++ Y +G D
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586
Query: 202 EVLRIWKKMM----------------SLF-------------------AKMNDAEYTCVI 226
E L ++++M+ LF MN Y V+
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K F++A ++ E +++ + N ++A ++E A+ + + G+
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
PC T+ ++ +K+G +E+ + F + PD RL+ +L ++ +I
Sbjct: 707 PCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA--GCEPDSRLLNHVVRELLKKNEI 760
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 154/346 (44%), Gaps = 9/346 (2%)
Query: 35 FENLPDK--MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ +P + R + +AL+++Y +N + + L+++M L YN ++N +
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINA-CA 222
Query: 93 NGQLD--KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G LD + + E++ + PD+VTYN L+ACA + + AE F + I PD
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L + K+ EK + L EM + +Y+ LL Y G E + ++ +
Sbjct: 283 TTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + N Y+ +++ + G ++ ++ E +S + D NIL+ +
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ + ++ +V + I+P T+E + + K G E + + + VP +
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM--TANDIVPSSKAY 460
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
T + + A T+ G + S E Y+SLL ++A+ G
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGG 506
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 128/303 (42%), Gaps = 5/303 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + D PD T S L+ ++ + ++ + L+ +M+ G L YN +L
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEA 326
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y +G + + + +++ +P+ TY++ L + + FLE+K + DPD
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ L ++ + ++ T +M + + Y ++ G ++ +I +
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M + + YT VI + + +E+A ++ + + LL ++
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGG 506
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
++ +E+ +RLV GI T+ Y + G+ E+ ++ + S + PD R
Sbjct: 507 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS--RCDPDERT 564
Query: 329 ITA 331
+ A
Sbjct: 565 LEA 567
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 92/258 (35%), Gaps = 38/258 (14%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S LL +Y ++ EA + +M G Y+ +LNL+ +G+ D V Q+
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 103 LQELK------------------------------------KNTSPDVVTYNLWLAACAS 126
E+K +N PD+ TY + AC
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E A K + I P +Y+ + + + L E+A M + +
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y SLL + G E I +++ N + I + + G+FE+A Y + E
Sbjct: 495 YHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 247 SISGTGDPRVPNILLAAY 264
D R +L+ Y
Sbjct: 555 KSRCDPDERTLEAVLSVY 572
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 139/284 (48%), Gaps = 10/284 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-- 106
+A++ Y ++ K ++A+ L++ M + G + + +N ++N + +G L P + EL
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGL--TPNLAVELLD 286
Query: 107 ---KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
PD +TYN L+AC+ ++ + A K F +++ + PD +Y+ + S+Y +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
L +A E+E + + V Y+SLL + ++V ++++M + ++ Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I K G+ + A +Y + + +SG D +L+ + N+ A + + ++
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
GIKP T+ L GY K G+ E+ + F + S K PD+
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTK--PDN 508
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L K PD T ++LL+++ + + + + + + ++M + GF K + YN ++++
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 90 YISNGQLDKVPQMLQELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y GQLD Q+ +++K +PD +TY + + + N A E+ I P
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+YS L Y K E+A T M + + + +AYS +L + + ++
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLY 531
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ M+S + Y +I L+K + + + E + G + ++L+
Sbjct: 532 RDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV 585
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 144/345 (41%), Gaps = 44/345 (12%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE++ PD T +A++ Y + +AEAE L ++ GF + YN +L +
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR 379
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDWI 150
+KV ++ Q+++K D +TYN + Q + A + + ++K + +PD I
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAI 439
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K +AA + EM + YS+L+ Y G ++E + M
Sbjct: 440 TYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K ++ Y+ ++ L++ E KA W
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKA------W------------------------- 528
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
Y +++ G P YT +EL+ G +K+ + + + +K I + + + L
Sbjct: 529 ----GLYRDMISDGHTPSYTLYELMILGLMKENRSDDI----QKTIRDMEELCGMNPLEI 580
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
++ E D+ A L V + N + + S+L +Y+ +G+
Sbjct: 581 SSVLVKGECFDL-AARQLKVAITNGYELENDTLLSILGSYSSSGR 624
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 6/266 (2%)
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME--LPEKAATT 171
V YN + + A++ +++ PD IS++TL + +K P A
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L + R + + Y++LLS + D +++++ M + + + Y +IS +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G +AE ++ E E D N LL A+ E + Y ++ G T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + Y K+GQ++ L+ +K G S R PD T + L + A L+
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 351 TLRNAGHVST-EIYNSLLRTYAKAGK 375
+ + G T + Y++L+ YAKAGK
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGK 488
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 122/285 (42%), Gaps = 11/285 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+L ++ + E + + M G+L Y M+ L ++ M+ E+++ N
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
++ +N L + D + + + +K+T ++PD +Y+TL +Y + PE+
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+++M Y SL+S + ++ +++++++S K++ + Y ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G KAE + ++ ++L+ +Y + + AE + L ++
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTT 1102
Query: 290 TTWELLTWGYLKK----GQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ + YL+ +E++LE K+ + PDHR+ T
Sbjct: 1103 LPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE------PDHRIWT 1141
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 155/355 (43%), Gaps = 24/355 (6%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ NL R PD T ++L+ +Y Q A A+ M G N +L+
Sbjct: 772 ESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHA 831
Query: 90 YISNGQLDKVPQMLQELK----KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+G+L+++ +++EL+ K + ++ L L A A + +K + +K
Sbjct: 832 LCVDGRLEELYVVVEELQDMGFKISKSSIL---LMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P Y + L K + A + EME+ + ++S+L +YT + + ++
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNI--LLA 262
+++++ + ++ Y +I + + E Y + + G DP++ L++
Sbjct: 949 VYQRIKETGLEPDETTYNTLI---IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 263 AYINRNQLEMAESFYNRLVTKGIK---PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
A+ + LE AE + L++KG+K Y T ++ + EK+L+ K A +
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA--GI 1063
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
+ L+ +Y+ G+ AE +L L++ ++T Y+S++ Y ++
Sbjct: 1064 EPTLATMHLLMVSYSS---SGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS 1115
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT +L+ ++ + K +AE L E++ G Y+ M+ + +G K ++LQ
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K P + T +L + + +S + + AEK LK T+++ + YS++ Y++ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
L EM+K + ++ + + K EV+ + K +
Sbjct: 1118 YNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKAL 1163
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 133/324 (41%), Gaps = 29/324 (8%)
Query: 86 MLNLYISNGQLDKVPQMLQELKKNTSPD--VVTYNLWLAACASQNDKETAEKAFLELKKT 143
+L Y S+G+ + ++L+ LK++ S ++T L + C N ++ F
Sbjct: 615 ILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYF------ 668
Query: 144 KIDP---DW-----ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
DP W Y TL + E +A+ ++ C + S++ +Y
Sbjct: 669 -ADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYC 727
Query: 196 NMGYKDEVLRIWKKMMSL-FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+G+ + ++ + + F YT +I + K ++KAE++ T D
Sbjct: 728 KLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDL 787
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLEC 311
+ N L++AY E A + +N ++ G P + +L G++E+ V+E
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTY 370
+ + K I + G+I + + +++ AG++ T +Y ++
Sbjct: 848 LQDMGFKISK-----SSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELL 902
Query: 371 AKAGKM--PLIIVERMQKDNVQMD 392
K ++ I+V M++ N +++
Sbjct: 903 CKGKRVRDAEIMVSEMEEANFKVE 926
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 170/379 (44%), Gaps = 25/379 (6%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+ F+ +P P S AL+++Y +N + + L+++M + L YN ++N
Sbjct: 166 QEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVIN- 224
Query: 90 YISNGQLD--KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ G LD ++ + +++ + D+VTYN L+ACA + + AE F + + I
Sbjct: 225 SCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGIL 284
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD +YS L + K+ EK + LKEME + +Y+ LL + G E + +
Sbjct: 285 PDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGV 344
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+++M N A Y+ +++ + G ++ +++ E + + + NIL+ +
Sbjct: 345 FRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGE 404
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK----VLECFKKAIGSVRKW 322
+ + ++ +V + ++P T+E L + K G E +L +K +
Sbjct: 405 GGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGV------ 458
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST----EIYNSLLRTYAKAG--KM 376
VP + T +E G E LV V + E YNSL++ +AK G K
Sbjct: 459 VPSSKAYTGV---IEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKE 515
Query: 377 PLIIVERMQKDNVQMDAET 395
I+ +M + V + +T
Sbjct: 516 SEAILLKMGQSGVARNRDT 534
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 141/366 (38%), Gaps = 48/366 (13%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S LL ++ Q+ EA + +M G + Y+ +LNLY +G+ D V +
Sbjct: 320 PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDL 379
Query: 103 LQELK------------------------------------KNTSPDVVTYNLWLAACAS 126
E+K +N P++ TY + AC
Sbjct: 380 FLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGK 439
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E A+K L + + + P +Y+ + Y + L E+A M + +
Sbjct: 440 GGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVET 499
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+SL+ ++ G E I KM N + VI + + G+FE+A Y E E
Sbjct: 500 YNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEME 559
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
D + +L+ Y +E +E + + GI P + ++ Y K + +
Sbjct: 560 KARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWD 619
Query: 307 K----VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTE 361
+ E F + ++ + + ++I Y ++ + E++ L++ G +
Sbjct: 620 DAHQLLDEMFTNRVSNIHQVI--GQMIRGDY---DDDSNWQMVEYVFEKLKSEGCSLGVR 674
Query: 362 IYNSLL 367
YN+LL
Sbjct: 675 FYNTLL 680
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/369 (18%), Positives = 145/369 (39%), Gaps = 45/369 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + + EAE + M+E G L Y++++ + +L+KV ++L+E+
Sbjct: 254 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 313
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETA-------------------------------- 133
+ S PD+ +YN+ L A A + A
Sbjct: 314 ESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRY 373
Query: 134 ---EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
FLE+K + +P+ +Y+ L +++ + ++ T +M + N Y L
Sbjct: 374 DDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGL 433
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ G ++ +I M + YT VI + + +E+A ++ +
Sbjct: 434 IFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGS 493
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
N L+ + + +E+ ++ G+ T+ + + + GQ E+ ++
Sbjct: 494 KPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIK 553
Query: 311 CF---KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSL 366
+ +KA + PD + + A + G ++ +E ++ G + S Y +
Sbjct: 554 AYVEMEKA-----RCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMM 608
Query: 367 LRTYAKAGK 375
L YAKA +
Sbjct: 609 LAVYAKADR 617
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T ++L+ + + E+EA++ KM + G + +N ++ + GQ ++ + E
Sbjct: 498 ETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVE 557
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++K PD T L+ E +E+ F E+K I P + Y + ++Y K +
Sbjct: 558 MEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADR 617
Query: 165 PEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ A L EM R ++V + Y + V +++K+ S + Y
Sbjct: 618 WDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYN 677
Query: 224 CVISSLVKLGEFEKAENIYDE 244
++ +L LG+ E+A + +E
Sbjct: 678 TLLEALWWLGQKERATRVLNE 698
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 4/285 (1%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
R E F E L + M+ PD T ++LL + A +L +M G + YN +
Sbjct: 166 RVLEIFDEMLRNGMQ-PDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTL 224
Query: 87 LNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
L+ GQLD +++ E+ KN P+VVTY+ + A + A F E+K I
Sbjct: 225 LDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGI 284
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
D +SY+TL S+Y K+ E+A +EME RK+ V Y++LL Y D V +
Sbjct: 285 SLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRK 344
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
++++M + N Y+ +I K G + +A +++ E++ D + + L+ A
Sbjct: 345 VFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALC 404
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+E A S + + +GI+P T+ + + + E V++
Sbjct: 405 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 449
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 161/364 (44%), Gaps = 5/364 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SA++ +Y ++ EA + M + G + YN +++ G + +V ++ E+
Sbjct: 116 SAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEML 175
Query: 108 KNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+N PD +T+N LA C+ E A E+ ID D +Y+TL K +
Sbjct: 176 RNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLD 235
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A + EM + N V YS+++ Y G D+ ++ +M L ++ Y ++
Sbjct: 236 MAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLL 295
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S KLG FE+A ++ E E+ D N LL Y + + ++ + + + +
Sbjct: 296 SIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVS 355
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L Y K G + ++ F++ + K D L +A + L + G ++ A
Sbjct: 356 PNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLK--ADVVLYSALIDALCKNGLVESAV 413
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEM 405
LL + G + YNS++ + + ++ + Q +Q+D+ + ++ ++
Sbjct: 414 SLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSSAVEKATKS 473
Query: 406 PVSE 409
V++
Sbjct: 474 LVAD 477
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
S + S ++ E A T K A+S+++S Y GY +E ++I+ M
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140
Query: 213 LFAKMNDAEYTCVISSLVKLG-EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
K N Y VI + K G EF++ I+DE D N LLA E
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A S +V +GI T+ L K GQ++ E + + +P+ +
Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEM--PAKNILPNVVTYST 258
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDN 388
+ + G +D A +L ++ G + YN+LL YAK G+ + + M+
Sbjct: 259 MIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSG 318
Query: 389 VQMDAETQKVL 399
++ D T L
Sbjct: 319 IRKDVVTYNAL 329
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 174/397 (43%), Gaps = 15/397 (3%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+ L+ R + ++PD + C++L+ + ++ K+ +A +ME + G + + Y
Sbjct: 125 EGLKFLERMIYQGDIPDVI----ACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY 180
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKK 142
N ++ Y +G++DK Q+L+ + + +PDVVTYN L + C S KE E ++++
Sbjct: 181 NVLIGGYCKSGEIDKALQVLERM--SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQR 238
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ PD I+Y+ L +A L EM K+ C+ + V Y+ L++ G DE
Sbjct: 239 -ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 297
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
++ M + N + ++ S+ G + AE + + + NIL+
Sbjct: 298 AIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ L A ++ G P ++ L G+ ++ +M++ +E + + R
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS--RGC 415
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI-- 379
PD L + G D A +L L + G I YN+++ K GK
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475
Query: 380 IVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
++E M++ ++ D T L + E V E IF
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + + A ++EKM + G + L YN +L+ + ++D+ + L+ +
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD+VTYN L A + A + +L P I+Y+T+ K+
Sbjct: 411 VSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 470
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E AA L+EM ++ + + + YS+LL G DE ++I+ M L K + Y +
Sbjct: 471 EYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAI 530
Query: 226 ISSLVKLGEFEKA 238
+ L K + +A
Sbjct: 531 MLGLCKAQQTSRA 543
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 126/327 (38%), Gaps = 38/327 (11%)
Query: 84 NHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N L + NG+L++ + L+ + + PDV+ + A + L+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ PD I+Y+ L Y K +KA L+ +E+ + + V Y+++L + G E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKA---LQVLERMSVAPDVVTYNTILRSLCDSGKLKE 227
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ + + M + YT +I + +A + DE D N+L+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 263 AYINRNQLEMAESFYNRLVTKGIKP------------CYTT-W---ELLTWGYLKKGQME 306
+L+ A F N + G +P C T W E L L+KG
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 307 KVLE--------CFKKAIG---SVRKWVPDHRLI--TAAYNKL-----EEQGDIDGAEHL 348
V+ C K+ +G V + +P H + + +YN L +E+ E+L
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407
Query: 349 LVTLRNAGHVSTEIYNSLLRTYAKAGK 375
+ + + YN+LL K GK
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGK 434
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 5/329 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ + V N + EA + +KM E G + YN +LN+Y G +K+ + + +K
Sbjct: 37 TSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMK 96
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD TYN + C + E A F ++K PD ++Y+ L +Y K +
Sbjct: 97 NAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTK 156
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L+EME C + V Y+SL+S Y G E + + +M+ ++ YT ++
Sbjct: 157 EAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLL 216
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S V+ G+ E A ++ E + + N L+ + NR + + +
Sbjct: 217 SGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCV 276
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P TW L + + G +V FK+ +VP+ + G D A
Sbjct: 277 PDIVTWNTLLAVFGQNGMDSEVSGVFKEM--KRAGFVPERDTYNTLISAYSRCGSFDQAM 334
Query: 347 HLLVTLRNAGHV-STEIYNSLLRTYAKAG 374
+ + AG YN++L A+ G
Sbjct: 335 DIYKRMLEAGITPDLSTYNAVLAALARGG 363
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+ FE + + PD T + L+ + EA A+ + M GF+ + YN +L++
Sbjct: 89 KGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDV 148
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y + + + ++L+E++ N SP +VTYN ++A A + A + ++ + I+ D
Sbjct: 149 YGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLD 208
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+TL S +++ E A EM C+ N +++L+ ++ N G E++++++
Sbjct: 209 VFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
++ + + + +++ + G + ++ E + + N L++AY
Sbjct: 269 EIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCG 328
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVL 309
+ A Y R++ GI P +T+ + + G Q EK+
Sbjct: 329 SFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIF 372
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 117/242 (48%), Gaps = 1/242 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ +Y ++ EA L +M E G Y +L+ ++ G+ + ++ E+
Sbjct: 176 TYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEM 235
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P++ T+N + ++ K F E+K + PD ++++TL +++ + +
Sbjct: 236 RAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMD 295
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ + KEM++ R Y++L+S Y+ G D+ + I+K+M+ + + Y V
Sbjct: 296 SEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAV 355
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++L + G +E++E I+ E + + LL AY N ++ + + + I
Sbjct: 356 LAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVI 415
Query: 286 KP 287
+P
Sbjct: 416 EP 417
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 144/350 (41%), Gaps = 22/350 (6%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + + PD T + LL + QN +E + ++M GF+ YN +++ Y
Sbjct: 267 FEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSR 326
Query: 93 NGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G D+ + + L+ +PD+ TYN LAA A E +EK F E+K + P+ ++
Sbjct: 327 CGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELT 386
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y +L Y + + +E+ + V +L+ + + D ++ +
Sbjct: 387 YCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKC---DLLVEAEVAFL 443
Query: 212 SLFAKMNDAEYTCVISSLVKLGE---FEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
L K + + + + L G F K I + T N L+ +
Sbjct: 444 ELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSE 503
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD--- 325
E +E ++ KGIKP ++ + + Y + G+M++ F + S VPD
Sbjct: 504 NFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRES--GLVPDVIT 561
Query: 326 HRLITAAY---NKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAK 372
+ A+Y + E+ D+ + +++ + YNS++ Y K
Sbjct: 562 YNTFVASYAADSMFEDAIDV-----VRYMIKHGCKPNQNTYNSVVDGYCK 606
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 137/345 (39%), Gaps = 48/345 (13%)
Query: 94 GQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G++ +L +L K+ DV Y + AC S A F ++++ P I+Y
Sbjct: 12 GKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITY 71
Query: 153 STLTSLYIKMELP------------------------------------EKAATTLKEME 176
+ + ++Y KM +P E+AA K+M+
Sbjct: 72 NVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMK 131
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
++V Y++LL +Y E + + ++M + Y +IS+ + G +
Sbjct: 132 SMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLK 191
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
+A + ++ D LL+ ++ + E A + + G KP T+ L
Sbjct: 192 EAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALI 251
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDH---RLITAAYNKLEEQGDIDGAEHLLVTLR 353
+ +G+ ++++ F++ S VPD + A + + ++ G + ++
Sbjct: 252 KMHGNRGKFAEMMKVFEEIKNSC--CVPDIVTWNTLLAVFGQNGMDSEVSG---VFKEMK 306
Query: 354 NAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
AG V + YN+L+ Y++ G + I +RM + + D T
Sbjct: 307 RAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLST 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + ++E + +M + L Y +L+ Y + ++ ++ +
Sbjct: 347 PDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLAL 406
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+ P V + + + AE AFLELK+ PD + + + S+Y +
Sbjct: 407 AEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGR 466
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT---NMGYKDEVLRIWKKMMSLFAKMN 218
++ K L M + + Y+SL+ +++ N +EVL K++++ K +
Sbjct: 467 RQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVL---KEILAKGIKPD 523
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y VI + + G ++A I+ E D N +A+Y + E A
Sbjct: 524 TISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVR 583
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
++ G KP T+ + GY K + +
Sbjct: 584 YMIKHGCKPNQNTYNSVVDGYCKHNHRDDAI 614
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 139/284 (48%), Gaps = 10/284 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-- 106
+A++ Y ++ K ++A+ L++ M + G + + +N ++N + +G L P + EL
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGL--TPNLAVELLD 286
Query: 107 ---KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
PD +TYN L+AC+ ++ + A K F +++ + PD +Y+ + S+Y +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
L +A E+E + + V Y+SLL + ++V ++++M + ++ Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I K G+ + A +Y + + +SG D +L+ + N+ A + + ++
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
GIKP T+ L GY K G+ E+ + F + S K PD+
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTK--PDN 508
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L K PD T ++LL+++ + + + + + + ++M + GF K + YN ++++
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 90 YISNGQLDKVPQMLQELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y GQLD Q+ +++K +PD +TY + + + N A E+ I P
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+YS L Y K E+A T M + + + +AYS +L + + ++
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLY 531
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ M+S + Y +I L+K + + + E + G + ++L+
Sbjct: 532 RDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV 585
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 144/345 (41%), Gaps = 44/345 (12%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE++ PD T +A++ Y + +AEAE L ++ GF + YN +L +
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR 379
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDWI 150
+KV ++ Q+++K D +TYN + Q + A + + ++K + +PD I
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAI 439
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K +AA + EM + YS+L+ Y G ++E + M
Sbjct: 440 TYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K ++ Y+ ++ L++ E KA W
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKA------W------------------------- 528
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
Y +++ G P YT +EL+ G +K+ + + + +K I + + + L
Sbjct: 529 ----GLYRDMISDGHTPSYTLYELMILGLMKENRSDDI----QKTIRDMEELCGMNPLEI 580
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
++ E D+ A L V + N + + S+L +Y+ +G+
Sbjct: 581 SSVLVKGECFDL-AARQLKVAITNGYELENDTLLSILGSYSSSGR 624
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 6/266 (2%)
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME--LPEKAATT 171
V YN + + A++ +++ PD IS++TL + +K P A
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L + R + + Y++LLS + D +++++ M + + + Y +IS +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G +AE ++ E E D N LL A+ E + Y ++ G T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + Y K+GQ++ L+ +K G S R PD T + L + A L+
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 351 TLRNAGHVST-EIYNSLLRTYAKAGK 375
+ + G T + Y++L+ YAKAGK
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGK 488
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 122/285 (42%), Gaps = 11/285 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+L ++ + E + + M G+L Y M+ L ++ M+ E+++ N
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
++ +N L + D + + + +K+T ++PD +Y+TL +Y + PE+
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+++M Y SL+S + ++ +++++++S K++ + Y ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G KAE + ++ ++L+ +Y + + AE + L ++
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTT 1102
Query: 290 TTWELLTWGYLKK----GQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ + YL+ +E++LE K+ + PDHR+ T
Sbjct: 1103 LPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE------PDHRIWT 1141
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 155/355 (43%), Gaps = 24/355 (6%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ NL R PD T ++L+ +Y Q A A+ M G N +L+
Sbjct: 772 ESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHA 831
Query: 90 YISNGQLDKVPQMLQELK----KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+G+L+++ +++EL+ K + ++ L L A A + +K + +K
Sbjct: 832 LCVDGRLEELYVVVEELQDMGFKISKSSIL---LMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P Y + L K + A + EME+ + ++S+L +YT + + ++
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNI--LLA 262
+++++ + ++ Y +I + + E Y + + G DP++ L++
Sbjct: 949 VYQRIKETGLEPDETTYNTLI---IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 263 AYINRNQLEMAESFYNRLVTKGIK---PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
A+ + LE AE + L++KG+K Y T ++ + EK+L+ K A +
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA--GI 1063
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
+ L+ +Y+ G+ AE +L L++ ++T Y+S++ Y ++
Sbjct: 1064 EPTLATMHLLMVSYSS---SGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS 1115
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT +L+ ++ + K +AE L E++ G Y+ M+ + +G K ++LQ
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K P + T +L + + +S + + AEK LK T+++ + YS++ Y++ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
L EM+K + ++ + + K EV+ + K +
Sbjct: 1118 YNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKAL 1163
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 133/324 (41%), Gaps = 29/324 (8%)
Query: 86 MLNLYISNGQLDKVPQMLQELKKNTSPD--VVTYNLWLAACASQNDKETAEKAFLELKKT 143
+L Y S+G+ + ++L+ LK++ S ++T L + C N ++ F
Sbjct: 615 ILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYF------ 668
Query: 144 KIDP---DW-----ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
DP W Y TL + E +A+ ++ C + S++ +Y
Sbjct: 669 -ADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYC 727
Query: 196 NMGYKDEVLRIWKKMMSL-FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+G+ + ++ + + F YT +I + K ++KAE++ T D
Sbjct: 728 KLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDL 787
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLEC 311
+ N L++AY E A + +N ++ G P + +L G++E+ V+E
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTY 370
+ + K I + G+I + + +++ AG++ T +Y ++
Sbjct: 848 LQDMGFKISK-----SSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELL 902
Query: 371 AKAGKM--PLIIVERMQKDNVQMD 392
K ++ I+V M++ N +++
Sbjct: 903 CKGKRVRDAEIMVSEMEEANFKVE 926
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL--DKVPQMLQEL 106
+A++ Y + + + + +++ M E G + +N ++N + G + + ++L E+
Sbjct: 214 NAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEV 273
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD++TYN ++AC+ +++ E A K F +++ PD +Y+ + S+Y +
Sbjct: 274 RRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFS 333
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA KE+E + + V Y+SLL + G D+V I +M+ + ++ Y +
Sbjct: 334 GKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTI 393
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ A +Y + + T D +L+ + N++ A + + ++ G+
Sbjct: 394 IHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGV 453
Query: 286 KPCYTTWELLTWGYLKKGQ---MEKVLECFKKA 315
KP T+ L GY + GQ E+ +C +++
Sbjct: 454 KPTLRTYSALICGYARAGQRLEAEETFDCMRRS 486
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F+ L K PD T ++LL+++ + + + + +M + GF++ + YN ++++
Sbjct: 337 EQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHM 396
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y GQ Q+ +++K +PD +TY + + + N A E+ + P
Sbjct: 397 YGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPT 456
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS L Y + +A T M + R +++AYS +L ++ + + +++
Sbjct: 457 LRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYR 516
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+M+ + Y ++ +L + + E + I + E + G + +IL+
Sbjct: 517 EMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIASILV 569
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 14/289 (4%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+++ PD T +A++ Y + S +AE L +++ G+ + YN +L +
Sbjct: 305 FDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAR 364
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +DKV ++ E+ + D +TYN + Q A + + ++K + PD I+
Sbjct: 365 EGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAIT 424
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L K +AA + EM + YS+L+ Y G + E + M
Sbjct: 425 YTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMR 484
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + Y+ ++ ++ E KA +Y E T DP V +L N++E
Sbjct: 485 RSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVE 544
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ R++ + C + + L KG EC++ A G +R
Sbjct: 545 DIQ----RIIRDMEEVCGMNPQAIA-SILVKG------ECYEDAAGMLR 582
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 134/304 (44%), Gaps = 7/304 (2%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACA 125
L+ ++ G + YN +++ L++ ++ +++ + PD+ TYN ++
Sbjct: 269 LLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYG 328
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
AE+ F EL+ PD ++Y++L + + +K EM + ++ +
Sbjct: 329 RCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEM 388
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDE 244
Y++++ +Y G L++++ M L + DA YT +I SL K + +A N+ E
Sbjct: 389 TYNTIIHMYGKQGQHGLALQLYRD-MKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSE 447
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+I R + L+ Y Q AE ++ + GI+P + ++ +L+ +
Sbjct: 448 MLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDE 507
Query: 305 MEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY 363
K + +++ VR + PD + A L + ++ + ++ + ++ +
Sbjct: 508 ATKAMMLYREM---VRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAI 564
Query: 364 NSLL 367
S+L
Sbjct: 565 ASIL 568
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 129/311 (41%), Gaps = 11/311 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+L ++ + AEA+ + + M G+ Y M+ L ++ V M+ E+++
Sbjct: 846 ILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAG 905
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD+ +N L +D + + +K+ + PD +Y+TL +Y + PE+
Sbjct: 906 FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGC 965
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ + EM + Y SL++ + + ++++++S +K++ + Y ++
Sbjct: 966 SLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIY 1025
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G KAE + + ++L+ +Y + Q + AE L G+
Sbjct: 1026 RNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLST 1085
Query: 290 TTWELLTWGYLKKGQ----MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + YLK ++K++E K+ + PDHR+ T A
Sbjct: 1086 LPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLE------PDHRIWTCFIRAASLSEHTHDA 1139
Query: 346 EHLLVTLRNAG 356
LL L+++G
Sbjct: 1140 ILLLQALQDSG 1150
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 14/331 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK---VPQMLQE 105
+AL+ +Y + +A A+ M G N +L I +G+L++ V Q +Q+
Sbjct: 774 NALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQD 833
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ S + L L A A ++ A+K + +K P Y + L K +
Sbjct: 834 MGFQISKSSIL--LILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRV 891
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ EME+ R + ++S+L LYT + + ++I++++ + ++ Y +
Sbjct: 892 RDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTL 951
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + E+ ++ E I L+AA+ + + AE + L++KG
Sbjct: 952 IVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGS 1011
Query: 286 KPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
K + + ++ Y G + EK+L K A V + L+ +Y G
Sbjct: 1012 KLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDA--GVEPTIATMHLLMVSYGS---SGQP 1066
Query: 343 DGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
AE +L L+ G +ST Y+S++ Y K
Sbjct: 1067 QEAEKVLTNLKEMGLSLSTLPYSSVIDAYLK 1097
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +LL+ + Q + EA +L++ M GF+ + YN ++N N L+ ++ +
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK D VTYN ++ ++ A + ++ K KIDP+ I ++ L ++K
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A KEM +R+ N Y+SL++ + G + ++ M+S + Y +
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ K E ++ E GD N L+ Y +L +A+ +NR+V G+
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ +L G++EK L
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKAL 414
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H Y Q K A+ + +M +CG + YN +L+ +NG+++K M+++L
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K+ D++TYN+ + + + A F L + + PD I+Y T+ S + L
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 166 EKAATTLKEMEK 177
+A + M++
Sbjct: 481 READKLCRRMKE 492
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+ +++ ++ G L + + +E ++++ P+V TYN + A+ F +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
PD ++Y+TL + + K + E EM + + Y++L+ Y G +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++ +M+ + Y ++ L G+ EKA + ++ + D NI++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++L+ A + L KG+KP + + G +KG
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ + K PD T + L+ + ++K+ + L +M+ G + YN +++ Y
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+L+ ++ + SPD+VTYN+ L + E A +L+K+++D D I+
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+ + + + ++A + + ++ + + +AY +++S G + E ++ ++M
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 89/247 (36%), Gaps = 51/247 (20%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+AL+ ++V+ EA L ++M + YN ++N + +G L M +
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 108 KNTSPDVVTYN-LWLAACASQNDKE----------------------------------T 132
K PDVVTYN L C S+ ++
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A+K F + + PD ++Y+ L EKA +++++K + + Y+ ++
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG---------------EFEK 237
E +++ + K + Y +IS L + G F
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Query: 238 AENIYDE 244
+E IYDE
Sbjct: 498 SERIYDE 504
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 5/312 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+F ++ PD + L++ Y +N +EA + +KM E G + YN +LN
Sbjct: 347 YFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLC 406
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
L + E+ ++ PD T+ + + + A F + + I PD +
Sbjct: 407 KKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIV 466
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L + K EKA EM R N ++Y+ L++ Y N+G+ E R+W +M
Sbjct: 467 TYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEM 526
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K VI + G+ KA+ + S D N L+ ++ +
Sbjct: 527 IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYM 586
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A N++ TKG++P T+ ++ G+ ++G+M++ +K I R PD T
Sbjct: 587 DKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIE--RGIDPDRSTYT 644
Query: 331 AAYNKLEEQGDI 342
N Q ++
Sbjct: 645 TLINGYVSQDNL 656
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 154/392 (39%), Gaps = 41/392 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+++Y + EA +M MS G YN ++N G+ + + E
Sbjct: 222 TYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM 281
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L SPD TYN L N+ A+ F ++ + PD IS+S+L + +
Sbjct: 282 LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHL 341
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A ++M+ + V Y+ L++ Y G E L I KM+ ++ Y +
Sbjct: 342 DQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTI 401
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K A ++DE D L+ + + A S + + K I
Sbjct: 402 LNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNI 461
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH-------------RLITAA 332
KP T+ +L G+ K +MEK E + + I RK P+H ++ A
Sbjct: 462 KPDIVTYNILIDGFCKTTEMEKANELWNEMIS--RKIFPNHISYAILVNGYCNLGFVSEA 519
Query: 333 YNKLEE----------------------QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+ +E GD+ A+ L + + G I YN+L+
Sbjct: 520 FRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLING 579
Query: 370 YAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ K M ++ +M+ +Q D T V+
Sbjct: 580 FVKGEYMDKAFFLINKMETKGLQPDVVTYNVI 611
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 129/299 (43%), Gaps = 12/299 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++++ ++ K + + + M + G + YN ++N Y G L + +++ +
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSM 246
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P + TYN + + A+ F E+ + PD +Y+TL +
Sbjct: 247 SGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNF 306
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +M R + +++SSL+ + + G+ D+ L ++ M + ++ YT +
Sbjct: 307 LEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL 366
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ + G +A I D+ D N +L + L A + ++ +V +G+
Sbjct: 367 INGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGV 426
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P + T+ L G+ K+G M K L F I + + PD YN L IDG
Sbjct: 427 VPDFCTFTTLIHGHCKEGNMGKALSLF--GIMTQKNIKPD----IVTYNIL-----IDG 474
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 148/355 (41%), Gaps = 10/355 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
L+ SYVQ +K E + + GFL N +L + G +D ++ E+ +
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+V T N+ + A + + + +++++ I D ++Y+TL + Y + L +A
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ M + + Y+++++ G ++ +M+S+ + Y ++
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVES 300
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ F +A++I+ + + D + L+ L+ A ++ + T G+ P
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ +L GY + G M + LE K + G V + ++ N L ++ + A
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTIL----NGLCKKKLLADANA 416
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
L + G V + +L+ + K G M L + M + N++ D T +L
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ ++ Y ++ ++A+ + KM G + YN ++N ++ +DK ++ ++
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKM 596
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PDVVTYN+ L Q + AE ++ + IDPD +Y+TL + Y+ +
Sbjct: 597 ETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNL 656
Query: 166 EKAATTLKEMEKR 178
++A EM +R
Sbjct: 657 KEAFRFHDEMLQR 669
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + + +A L +M + Y ++N Y + G + + ++
Sbjct: 463 PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRL 522
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E ++K P +VT N + D A++ ++ + PD I+Y+TL + ++K
Sbjct: 523 WDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVK 582
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E +KA + +ME + + + V Y+ +L+ + G E I +KM+ + +
Sbjct: 583 GEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRST 642
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
YT +I+ V ++A +DE
Sbjct: 643 YTTLINGYVSQDNLKEAFRFHDE 665
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 115/278 (41%), Gaps = 5/278 (1%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLA 122
E+L+ S CG L ++ ++ Y+ +L++ + L+ K + N L
Sbjct: 101 VESLISMSSTCGVDN--LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLG 158
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ A + + E+ ++ I+ + + + + + K + L +ME++
Sbjct: 159 GLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFA 218
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ V Y++L++ Y G E + M K Y VI+ L K G + +A+ ++
Sbjct: 219 DIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVF 278
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+E SI + D N LL N A+ ++ ++ +G+ P ++ L +
Sbjct: 279 NEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRN 338
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
G +++ L F+ S VPD+ + T N G
Sbjct: 339 GHLDQALMYFRDMKTS--GLVPDNVIYTILINGYCRNG 374
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ L++ Y +EA L ++M G + N ++ Y +G L K + L + +
Sbjct: 504 AILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMIS 563
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK---IDPDWISYSTLTSLYIKMEL 164
+ PD +TYN + E +KAF + K + + PD ++Y+ + + + +
Sbjct: 564 EGVGPDSITYNTLINGFVK---GEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGR 620
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++A L++M +R +R Y++L++ Y + E R +M+
Sbjct: 621 MQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEML 667
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 155/364 (42%), Gaps = 16/364 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + E++P+ RG LL + + + E KM E GF N +L +Y
Sbjct: 178 EKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAFACNQLLLIYK 237
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L K+N P TY + + ND + + +K + D ++
Sbjct: 238 KIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQIVETMKAEGCELDHLT 297
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++L Y L EK LKE+E ++N +LL LY +G DEV RIWK
Sbjct: 298 RASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCE 357
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYD----EWESISGTGDPRVPNILLAAYINR 267
S K + I + +L + E+AE +++ +W+ + R LL YI
Sbjct: 358 S---KPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTA-----RNYESLLKIYIRH 409
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
L + + G TTW+ L Y++ G++EK +KA+ K P
Sbjct: 410 KMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQ-NKMKPMFT 468
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLI-IVERMQ 385
+ ++GD+ AE + LR A ++S +++L + Y K K+P I ERM+
Sbjct: 469 TFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQAY-KNAKLPAYGIRERMK 527
Query: 386 KDNV 389
DN+
Sbjct: 528 ADNL 531
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 157/345 (45%), Gaps = 20/345 (5%)
Query: 70 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQN 128
KM E P YN ++ L+ S G+ + ++L ++K + +P TYN+ L A+++
Sbjct: 174 KMRELSLPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEH 233
Query: 129 DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYS 188
+ + + F ++K+ K++P+ I+Y L + L + T ++ +E N
Sbjct: 234 NIDGVARVFNDMKRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTLE 293
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
LL LY G E+ W M L + + I + K+G ++AE I+ ++ES
Sbjct: 294 ILLILYGYHGKAKELKMTWDLMQGL-PHIRPKSFILAIEAFGKVGSIDQAEEIWGKFES- 351
Query: 249 SGTGDPRVP---NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
T P++ N +L+ Y ++ A + + + G +P T+ LT G LK G +
Sbjct: 352 --TRKPKLTEQFNSILSVYCRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGCLKAGIV 409
Query: 306 EKVLECFKKA--------IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
++ L+ A + S W+ +I ++ E GD+ A+ + L + +
Sbjct: 410 KEALKTMDIAKKEVVTKKVKSSTPWLETTHMILESF---AENGDLVNAKRVFDELNESKY 466
Query: 358 V-STEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKI 401
++ +YN+LL+ + KA ++ M DAET +L I
Sbjct: 467 CRNSFVYNTLLKAHVKAKVYEPDLLRAMILRGAMPDAETYSLLGI 511
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 155/364 (42%), Gaps = 16/364 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + E++P+ RG LL + + + E KM E GF N +L +Y
Sbjct: 227 EKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAFACNQLLLIYK 286
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L K+N P TY + + ND + + +K + D ++
Sbjct: 287 KIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQIVETMKAEGCELDHLT 346
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++L Y L EK LKE+E ++N +LL LY +G DEV RIWK
Sbjct: 347 RASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCE 406
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYD----EWESISGTGDPRVPNILLAAYINR 267
S K + I + +L + E+AE +++ +W+ + R LL YI
Sbjct: 407 S---KPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTA-----RNYESLLKIYIRH 458
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
L + + G TTW+ L Y++ G++EK +KA+ K P
Sbjct: 459 KMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQ-NKMKPMFT 517
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLI-IVERMQ 385
+ ++GD+ AE + LR A ++S +++L + Y K K+P I ERM+
Sbjct: 518 TFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQAY-KNAKLPAYGIRERMK 576
Query: 386 KDNV 389
DN+
Sbjct: 577 ADNL 580
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 171/373 (45%), Gaps = 20/373 (5%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLN 88
+FE + PDT + ++H V++ + EA L+ M E +CP + Y +++
Sbjct: 282 YFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMRE-KRTQCPPDVVTYTSIMH 340
Query: 89 LYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y G+++ + + + P++V+YN L A AS+ A F LK+ + P
Sbjct: 341 SYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRP 400
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +SY+TL + Y + PEKA KEM K +CR N V+Y++L+ Y + G E + +
Sbjct: 401 DVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLL 460
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+M + + ++++ + + K + I + +S + N + +Y+N
Sbjct: 461 HEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNF 520
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
A Y ++ + P T+ +L G K G+ + L+ F+ + +R +P
Sbjct: 521 GDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMV-DLR--IP--- 574
Query: 328 LITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLII 380
L Y+ L +QG + AE +++ +G + + Y +++ Y G + +
Sbjct: 575 LTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDL 634
Query: 381 VERMQKDNVQMDA 393
+ M+ + VQ DA
Sbjct: 635 FKEMEGNTVQPDA 647
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 163/408 (39%), Gaps = 24/408 (5%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
R +G +R + ++ QA+ L +E + PD D ++L+H++ + +
Sbjct: 154 RNDIYGMMIRLHARHSQIDQARGLFFEMQE--WRCKPD----ADIYNSLIHAHARAGQWR 207
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWL 121
A +M+ M YN+++N + G K ++ +++ +N PD+VT+N+ L
Sbjct: 208 WAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVL 267
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRT- 179
+A + + A F +K I PD + + + +K +A L M EKRT
Sbjct: 268 SAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQ 327
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C + V Y+S++ Y G ++ ++ M++ K N Y ++ + G A
Sbjct: 328 CPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADAL 387
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
I+ + D LL AY Q E A + + +P ++ L Y
Sbjct: 388 GIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAY 447
Query: 300 LKKGQMEKVLECFKKAIGSVRKW-----VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN 354
G FK+AI + + PD I+ I + +L ++
Sbjct: 448 GSAGM-------FKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKS 500
Query: 355 AG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
G ++ YNS + +Y G L + M NV DA T +L
Sbjct: 501 RGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNIL 548
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 116/307 (37%), Gaps = 38/307 (12%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + S LL + + ++ + + ++E G + YN + Y++ G K ++
Sbjct: 470 PDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALEL 529
Query: 103 LQ-ELKKNTSPDVVTYNLWLAA---------------------------------CA--S 126
+ N +PD VTYN+ ++ C+
Sbjct: 530 YAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVK 589
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
Q AE F +K++ PD ++Y+ + Y A KEME T + + +
Sbjct: 590 QGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAII 649
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
SSL+ + VL++ + M +N Y +I+S L +++ A I + +
Sbjct: 650 CSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLD 709
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S + N LL + E + ++++ +T+ +L L G+
Sbjct: 710 SSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWR 769
Query: 307 KVLECFK 313
K +E +
Sbjct: 770 KYIEVLQ 776
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +LL+ + Q + EA +L++ M GF+ + YN ++N N L+ ++ +
Sbjct: 676 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 735
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK D VTYN ++ ++ A + ++ K KIDP+ I ++ L ++K
Sbjct: 736 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 795
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A KEM +R+ N Y+SL++ + G + ++ M+S + Y +
Sbjct: 796 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 855
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ K E ++ E GD N L+ Y +L +A+ +NR+V G+
Sbjct: 856 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 915
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ +L G++EK L
Sbjct: 916 SPDIVTYNILLDCLCNNGKIEKAL 939
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 126/292 (43%), Gaps = 7/292 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +LLH + + +A +L+ M + G+ + YN +++ NG+L+ ++L E+
Sbjct: 143 TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK DVVTYN L A + ++ K I+PD ++++ L +++K
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL 262
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A KEM + + N V Y+S+++ G + + + M S N Y +
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS K ++ ++ D N L+ Y +L +A + +V++ +
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECF------KKAIGSVRKWVPDHRLITA 331
P T +L G G++E L F +K IG V + H L A
Sbjct: 383 TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H Y Q K A+ + +M +CG + YN +L+ +NG+++K M+++L
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K+ D++TYN+ + + + A F L + + PD I+Y T+ S + L
Sbjct: 946 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 1005
Query: 166 EKAATTLKEMEK 177
+A + M++
Sbjct: 1006 READKLCRRMKE 1017
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+ +++ ++ G L + + +E ++++ P+V TYN + A+ F +
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
PD ++Y+TL + + K + E EM + + Y++L+ Y G +
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++ +M+ + Y ++ L G+ EKA + ++ + D NI++
Sbjct: 902 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++L+ A + L KG+KP + + G +KG
Sbjct: 962 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ + K PD T + L+ + ++K+ + L +M+ G + YN +++ Y
Sbjct: 837 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 896
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+L+ ++ + SPD+VTYN+ L + E A +L+K+++D D I+
Sbjct: 897 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 956
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+ + + + ++A + + ++ + + +AY +++S G + E ++ ++M
Sbjct: 957 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 1015
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 8/213 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P +VT+ L N A + + K+ +P+ + Y+TL K
Sbjct: 133 MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL 192
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L EMEK+ + V Y++LL+ G + R+ + MM + +T +
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN----RNQLEMAESFYNRLV 281
I VK G ++A+ +Y E I + DP N+ + IN +L A+ ++ +
Sbjct: 253 IDVFVKQGNLDEAQELYKEM--IQSSVDPN--NVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+KG P T+ L G+ K +++ ++ F++
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 89/247 (36%), Gaps = 51/247 (20%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+AL+ ++V+ EA L ++M + YN ++N + +G L M +
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842
Query: 108 KNTSPDVVTYN-LWLAACASQNDKE----------------------------------T 132
K PDVVTYN L C S+ ++
Sbjct: 843 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A+K F + + PD ++Y+ L EKA +++++K + + Y+ ++
Sbjct: 903 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 962
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG---------------EFEK 237
E +++ + K + Y +IS L + G F
Sbjct: 963 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1022
Query: 238 AENIYDE 244
+E IYDE
Sbjct: 1023 SERIYDE 1029
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 4/333 (1%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+TC+ +L +++ ++ A L +M +N M+N+ G+L K + +
Sbjct: 182 ETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGH 241
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ P+VVTYN + + + A F +K ++PD +Y++ S K
Sbjct: 242 METLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGR 301
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E+A+ + +M + N V Y++L+ Y N G D+ +M+S + Y
Sbjct: 302 LEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNL 361
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I +L G A+N+ E D NIL+ Y + A + +V KG
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I+P T+ L + K+ +M++ F K +PD + A + G+ID
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKI--QQEGLLPDIIVFNALIDGHCANGNIDR 479
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A LL + N + EI YN+L++ Y + GK+
Sbjct: 480 AFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 149/378 (39%), Gaps = 53/378 (14%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEA 64
HG +R + R RV F+ + DK PD T ++ + + + EA
Sbjct: 259 HGHCLRGKFQRARV-------------IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEA 305
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKV------------------------- 99
L+ KM E G + + YN +++ Y + G LDK
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA 365
Query: 100 ----------PQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
M++E++ K PD VT+N+ + D + A E+ I P
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPT 425
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++Y++L + K ++A ++++ + + +++L+ + G D ++ K
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M ++ ++ Y ++ + G+ E+A + DE + D N L++ Y R
Sbjct: 486 EMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 545
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
++ A + ++T G P T+ L G K + E E K+ + + PD
Sbjct: 546 DMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVS--KGITPDDST 603
Query: 329 ITAAYNKLEEQGDIDGAE 346
+ +E D++G +
Sbjct: 604 YLSIIEAMETVDDLEGND 621
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 7/263 (2%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+ ++L + A A + F +K+ P+ + + + SL++K+ + A E
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + R + ++ ++++ G + M +L K N Y +I G+
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
F++A I+ + D N ++ +LE A +++ G+ P T+
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNA 326
Query: 295 LTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L GY KG ++K + I G + V + I A + +G + A++++ +
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF----MEGRMGDADNMIKEM 382
Query: 353 RNAGHVSTEI-YNSLLRTYAKAG 374
R G + + +N L+ Y + G
Sbjct: 383 REKGMMPDAVTHNILINGYCRCG 405
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 119/269 (44%), Gaps = 12/269 (4%)
Query: 138 LELKKTKIDPDW-ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
L L + ++D + + L Y +++ P +A ++++ N + +LSL+
Sbjct: 134 LALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLK 193
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
+ ++ +M + + + + +I+ L K G+ +KA+ E++ +
Sbjct: 194 LNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVT 253
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKP-CYTTWELLTWGYLKKGQMEKV--LECFK 313
N ++ + R + + A + + KG++P CYT ++ G K+G++E+ L C
Sbjct: 254 YNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFIS-GLCKEGRLEEASGLICKM 312
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
G V V + LI NK GD+D A + + G +++ + YN +
Sbjct: 313 LEGGLVPNAVTYNALIDGYCNK----GDLDKAYAYRDEMISKGIMASLVTYNLFIHALFM 368
Query: 373 AGKMPLI--IVERMQKDNVQMDAETQKVL 399
G+M +++ M++ + DA T +L
Sbjct: 369 EGRMGDADNMIKEMREKGMMPDAVTHNIL 397
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 163/350 (46%), Gaps = 8/350 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C+ +L ++++ ++ +A L +M + +N M+N+ G+L K + + ++
Sbjct: 159 CNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLME 218
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
P+VVTYN + S+ E A F +K + PD +Y + S K E
Sbjct: 219 ALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLE 278
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A+ L++M++ R V Y++L+ Y N G + KM+ + Y +I
Sbjct: 279 EASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLI 338
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+L + ++A+ I E D NIL+ Y ++ A + ++ +++KGI+
Sbjct: 339 HALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQ 398
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGA 345
P T+ L + K+G+M++ + F+K VRK + PD + A + G++D A
Sbjct: 399 PTRVTYTSLIYVLSKRGRMKQADDLFEKI---VRKGIFPDLIMFNALIDGHCANGNMDRA 455
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMD 392
+L + V E+ +N+L++ + GK+ ++E M+ ++ D
Sbjct: 456 FAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPD 505
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 15/276 (5%)
Query: 41 KMRG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
K RG PD T + + + K EA ++EKM E G + YN +++ Y + G L
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312
Query: 97 ----DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
D +M++E P V TYN+ + A + A+ E+ + + PD ++Y
Sbjct: 313 EMAFDYRDKMVRE---GLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTY 369
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM- 211
+ L + Y + +KA T EM + + RV Y+SL+ + + G + +++K++
Sbjct: 370 NILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVR 429
Query: 212 -SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+F + + +I G ++A + E + + D N L+ ++
Sbjct: 430 KGIFPDL--IMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKV 487
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
E A + ++GIKP + ++ L GY K+G M+
Sbjct: 488 EAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 1/253 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+H+ + K EA+ ++++MSE G + + YN ++N Y G + K + E
Sbjct: 333 TYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEM 392
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K P VTY + + + + A+ F ++ + I PD I ++ L +
Sbjct: 393 ISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNM 452
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A LKEM++ + V +++L+ G + + ++M S K + Y +
Sbjct: 453 DRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTL 512
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS K G+ + A + DE SI N L+ + + AE +++KGI
Sbjct: 513 ISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGI 572
Query: 286 KPCYTTWELLTWG 298
P T+ L G
Sbjct: 573 TPNDNTYLSLIEG 585
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 3/270 (1%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K P V N L+ N E A + E+ + +I ++++ + ++ K +K
Sbjct: 150 KGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKK 209
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + ME + N V Y++++ Y + G + I+ M K + Y IS
Sbjct: 210 AKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFIS 269
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ K G+ E+A + ++ + I N L+ Y N+ LEMA + +++V +G+ P
Sbjct: 270 GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+T+ +L +M++ K+ S + VPD N G++ A
Sbjct: 330 TVSTYNMLIHALFLDCKMDEADGIIKEM--SEKGLVPDSVTYNILINGYCRCGNVKKAFT 387
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L + + G T + Y SL+ +K G+M
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L++ + + +A+ L EK+ G + +N +++ + +NG +D+ ML+E+
Sbjct: 403 TYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM 462
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD VT+N + + E A + E+K I PD ISY+TL S Y K
Sbjct: 463 DQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDM 522
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + Y++L+ D ++ K+M+S ND Y +
Sbjct: 523 KDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSL 582
Query: 226 ISSL 229
I +
Sbjct: 583 IEGI 586
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 7/265 (2%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
V Y+L + AC + A + F +K + P + + + SL++K EKA E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + + + V ++ ++++ G + M +L K N Y +I G
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
E A I+D + D ++ +LE A ++ G++P T+
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 295 LTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L GY KG +E + K + G + + LI A + + +D A+ ++ +
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK----MDEADGIIKEM 357
Query: 353 RNAGHVSTEI-YNSLLRTYAKAGKM 376
G V + YN L+ Y + G +
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNV 382
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 150/332 (45%), Gaps = 9/332 (2%)
Query: 49 SALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQ 104
S LL + + K++ EA + L+ + E G + YN +L + +GQ D + +M+
Sbjct: 116 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMA 175
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
E SPDVV YN + + D A F E+ + I PD ++Y+++ K
Sbjct: 176 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 235
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+KA L++M + N Y++L+ Y++ G E +R++K+M + +
Sbjct: 236 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 295
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ SL K G+ ++A +++D D NI+L Y + L ++ ++ G
Sbjct: 296 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 355
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDID 343
I P + T+ + Y G ++K + F + V+ V +R + AA ++ G +D
Sbjct: 356 IAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI---GKMD 412
Query: 344 GAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG 374
A + + G + YN L++ + G
Sbjct: 413 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 444
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/247 (17%), Positives = 97/247 (39%), Gaps = 38/247 (15%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F+ + + PD T ++++H+ + + +AEA + +M L YN+++ Y
Sbjct: 206 DLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGY 265
Query: 91 ISNGQLDKVPQMLQELKKNT------------------------------------SPDV 114
S GQ + ++ +E+++++ +PDV
Sbjct: 266 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 325
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+YN+ L A++ F + I PD+ +++ Y + +KA E
Sbjct: 326 FSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNE 385
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + + V Y ++++ +G D+ + + +M+ + Y C+I G
Sbjct: 386 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGI 445
Query: 235 FEKAENI 241
K + I
Sbjct: 446 LLKTQGI 452
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 146/325 (44%), Gaps = 9/325 (2%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
RAR+ F+ +P+K PD T S ++ Y +++ AEA +L +M G YN +
Sbjct: 612 RARK-LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
++ G ++K + +E+ + +++N + + A + F E+ +I
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD ++Y+T+ + K E+A KEM++R + V Y+SL+ Y +G EV +
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++KM++ K ++ Y VI + K +A + DE + ++L+ A
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 850
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVP 324
R L A + + G+KP L + + G+M++ F+ K++G VP
Sbjct: 851 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG----LVP 906
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLL 349
D + N D + A +L+
Sbjct: 907 DTTTLIDLVNGNLNDTDSEDARNLI 931
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 144/329 (43%), Gaps = 4/329 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L+ Y + A L+++M + + + Y M+N L ++L+++
Sbjct: 316 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 375
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+VV Y+ + AS+ E A + + + + PD Y+ + S K
Sbjct: 376 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 435
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A+T L E++ R + + V + + + Y+ G E + + +M+ N+ YT +
Sbjct: 436 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 495
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ K G +A +I+ ++ D + + + + +++ A ++ L KG+
Sbjct: 496 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 555
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K+G++EK E + ++ P+ + A + L + GDI A
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEM--CLKGIAPNIFIYNALVDGLCKSGDIQRA 613
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
L + G + Y++++ Y K+
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKS 642
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 161/394 (40%), Gaps = 26/394 (6%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + PD CSAL+ +++ E + + M CG + YN +++
Sbjct: 232 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 291
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+++K ++L+ + P+ T+ L + +++ A + E++K + P +S
Sbjct: 292 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y + + + A L++M + N V YS+L+ Y + G +E R+ M
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ Y +IS L K G+ E+A E + D + Y ++
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLI 329
A +++ ++ G+ P + +L G+ K G + + L F+ A+G +PD +
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG----VLPDVQTC 527
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM------------ 376
+A + L + G + A + L+ G V Y+SL+ + K G++
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587
Query: 377 ----PLIIVERMQKDNVQMDAETQKVLKITSEMP 406
P I + D + + Q+ K+ MP
Sbjct: 588 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 621
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/423 (19%), Positives = 166/423 (39%), Gaps = 81/423 (19%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
A+++ K + A L+EKM+ G + Y+ ++ Y S G++++ ++L +
Sbjct: 353 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 412
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+PD+ YN ++ + E A LE++ + PD +++ Y K +
Sbjct: 413 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----------------- 210
AA EM N Y+ L++ + G E L I++ +
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 532
Query: 211 -----------MSLFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEW------- 245
+ +F+++ + Y+ +IS K GE EKA ++DE
Sbjct: 533 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 592
Query: 246 ---------ESISGTGDPR--------VP-----------NILLAAYINRNQLEMAESFY 277
+ + +GD + +P + ++ Y + A S +
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY---N 334
+ + +KG++P + L G K+G MEK + F++ + + Y
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 712
Query: 335 KLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
K++E + + ++ HV+ Y +++ + KAGKM ++ + MQ+ N+ +D
Sbjct: 713 KIQEASQL--FQEMIAKQIMPDHVT---YTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 767
Query: 393 AET 395
T
Sbjct: 768 TVT 770
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 130/302 (43%), Gaps = 27/302 (8%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
P+ ++ +++ Y G LD+ + K ++ + ++ + + EK +
Sbjct: 156 PVVFDILIDSYKRMGMLDEAANVFFVAKNDS--------ILISLIRCNSLRSMGEKGLV- 206
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
P+ +Y+ +T+ + + +A T +EM+K + + A S+L+ + G
Sbjct: 207 -------PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
DEVLRI M+S +N Y +I L K G+ EKA I ++ + R +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLECFKKAI 316
L+ Y + + A + + + + P ++ + G + K+LE K
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE--KMTF 377
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
++ V + + Y +G I+ A LL + +G V+ +I YN+++ +KAG
Sbjct: 378 SGLKPNVVVYSTLIMGY---ASEGRIEEARRLLDGMSCSG-VAPDIFCYNAIISCLSKAG 433
Query: 375 KM 376
KM
Sbjct: 434 KM 435
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 3/271 (1%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+K P+ TY + A A+ F E++KT + PD+ + S L +++ +
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+ M N + Y+ L+ G ++ I K M++L K N + +I
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 321
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ +A + DE E + ++ + L +A ++ G+K
Sbjct: 322 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 381
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + L GY +G++E+ S PD A + L + G ++ A
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGM--SCSGVAPDIFCYNAIISCLSKAGKMEEAS 439
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L+ ++ G + + + + Y+K GKM
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 7/330 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
++L+ +Y N + +A + +KM E G + YN +LN+Y G K+ ++ +K
Sbjct: 221 TSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMK 280
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ +PD TYN ++ C + E A + F E+K + PD ++++TL +Y K P+
Sbjct: 281 SSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPK 340
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LKEME + V Y+SL+S Y G E + + +M+ K + YT ++
Sbjct: 341 EAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLL 400
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S K G E A I+ E + + N L+ + NR + + +
Sbjct: 401 SGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCA 460
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P TW L + + G +V FK+ + +VP+ + G A
Sbjct: 461 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA--GFVPERDTFNTLISAYSRCGSFQQAM 518
Query: 347 HLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
+ + AG V+ ++ YN++L A+ G
Sbjct: 519 AVYKRMLEAG-VTPDLSSYNAVLAALARGG 547
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 17/340 (5%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T + LL Y ++++ EA ++++M GF + YN +++ Y +G L +
Sbjct: 321 PDKV----TFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLRE 376
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ Q ++K PDV TY L+ E A + F E++ P+ +++ L
Sbjct: 377 AMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIK 436
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAK 216
++ + +E+E C + V +++LL+++ G EV ++K+M + F
Sbjct: 437 MHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 496
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
D + +IS+ + G F++A +Y T D N +LAA E +E
Sbjct: 497 ERDT-FNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKV 555
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP----DHRLITAA 332
+ + KP T+ L Y ++E++ ++ + + VP L+ +
Sbjct: 556 FAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSK 615
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAK 372
+ L E EH L+ G N+++ Y +
Sbjct: 616 CDLLME------TEHAFEELKKKGSPDLSTLNAMIAIYGR 649
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 24/289 (8%)
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
L+K D D +Y++L + Y A K+ME+ C+ + Y+ +L++Y MG
Sbjct: 208 LRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGM 267
Query: 200 KDEVLRIWKKMMSLFAKM-------NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
W K+ L M +D Y +IS + +E+A +++E + +
Sbjct: 268 P------WSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSP 321
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N LL Y + + A + G P T+ L Y + G + + +E
Sbjct: 322 DKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELK 381
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG---HVSTEIYNSLLRT 369
+ + K PD T + E+ G + A + +R AG ++ T +N+L++
Sbjct: 382 DQMVEKGIK--PDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICT--FNALIKM 437
Query: 370 YAKAGKMP--LIIVERMQKDNVQMDAET-QKVLKITSEMPV-SEVSSIF 414
+ G+ + + E ++ N D T +L + + + SEVS +F
Sbjct: 438 HGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVF 486
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 137/343 (39%), Gaps = 21/343 (6%)
Query: 44 GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
PD T + LL + QN +E + ++M GF+ +N +++ Y G +
Sbjct: 460 APDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMA 519
Query: 102 MLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ + L+ +PD+ +YN LAA A E +EK F E+K + P+ ++Y +L Y
Sbjct: 520 VYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYA 579
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ E+ T +E+ V +L+ + + K ++L + K
Sbjct: 580 NSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNS----KCDLLMETEHAFEELKKKGSP 635
Query: 221 EYTCVISSLVKLGE---FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ + + + + G KA I + + N L+ + E +E
Sbjct: 636 DLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVL 695
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPD---HRLITAA 332
++ KG+KP ++ + + Y + G+M+ F K G VPD + A+
Sbjct: 696 KEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYG----LVPDVITYNTFVAS 751
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
Y D G ++ ++ + YNS++ Y K +
Sbjct: 752 YAADSLFEDAIGVVRYMI--KHGCKRNQNTYNSIVDGYCKHSR 792
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 147/337 (43%), Gaps = 15/337 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQMLQEL 106
S +L N S A L + M++ G P + YN +++ + G+ K + E+
Sbjct: 232 SIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEM 291
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PDVVTYNL + A + AE ++ PD ++Y+ + Y +
Sbjct: 292 TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRL 351
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++AA ++M+ R N V +S L+ G E I+ M + K + Y +
Sbjct: 352 KEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTL 411
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ G F +++ +S D RV NIL+ AY R ++ A + + +G+
Sbjct: 412 LHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGV 471
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE----QGD 341
P T+ + + + G++ +E F + + R P+ TA Y+ + + G
Sbjct: 472 SPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA--RGIQPN----TAVYHSIIQGFCMHGG 525
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ A+ L+ + N G +I +NS++ + K G++
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 156/364 (42%), Gaps = 13/364 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + ++ + + + +AE ++ +M+ G + YN M++ Y + G+L + +M
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKM 357
Query: 103 LQELK-KNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+++K + P++V N +LA+ C KE AE F + PD +SY TL Y
Sbjct: 358 FRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAE-IFDSMTAKGHKPDIVSYCTLLHGYA 416
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
M+ + ++ L+ Y G D+ + I+ +M +
Sbjct: 417 SEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV 476
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y+ VIS+ ++G A +++ + + V + ++ + L A+ + +
Sbjct: 477 TYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEM 536
Query: 281 VTKGI-KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ KGI +P + + K G++ + F + PD T+ +
Sbjct: 537 INKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER--PDVITFTSLIDGYCLV 594
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
G +D A +L + G V T+I Y++LL Y K G++ L + MQ+ V+ + T
Sbjct: 595 GKMDKAFKILDAMEVVG-VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Query: 396 QKVL 399
++
Sbjct: 654 YGIM 657
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 130/316 (41%), Gaps = 14/316 (4%)
Query: 43 RGPDTCSALLHSYVQ----NKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNG 94
RG +A+ HS +Q + +A+ L+ +M G P P +N ++N +G
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGI---PRPDIVFFNSVINSLCKDG 560
Query: 95 QLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
++ + + PDV+T+ + + A K ++ ++ D ++YS
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
TL Y K T +EM+++ + N V Y +L+ G + + +M+
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
+ + Y ++ L + ++A ++ + +++ + N ++ A + E A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
+ + + G+ P +T+ ++ LK G +E F S VP RL+
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS--GIVPGSRLLNRII 798
Query: 334 NKLEEQGDIDGAEHLL 349
L E+G+I A + L
Sbjct: 799 RMLLEKGEIAKAGNYL 814
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 42 MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
M G TCS LL+ ++ K A+AE ++E + G + + YN ++N Y L
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390
Query: 102 MLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ +++K ++ PD +TYN + AE +E++K+ +DP +++TL Y
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
EK T L +M+++ + + +++ S++ + G E + I M+ N
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +I + ++ G+ E+A + ++ ++ + N+LL +Q++ AE L
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+G++P ++ + KG +K LE ++
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 45/360 (12%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVV 115
++ K ++A + ++M + G + + YN M++ ++ G L+ ++ Q L P++V
Sbjct: 206 RSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIV 265
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL-----------TSLYIKMEL 164
TYN+ L+ + E+ + PD +YS L T L + E
Sbjct: 266 TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 325
Query: 165 PEK----AATTLKEMEKRTCRKNRVA--------------------YSSLLSLYTNMGYK 200
+K A T + C+ +VA Y++L++ Y +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 385
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--N 258
I+++M S + + Y +I+ L KL KAE++ E E SG DP V N
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK-SGV-DPSVETFN 443
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
L+ AY QLE + + + KGIK ++ + + K G++ + + I
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI-- 501
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ P+ ++ + + E GD + A L+ ++N+G VS I YN LL+ ++ ++
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG-VSASIVTYNLLLKGLCRSSQI 560
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 110/291 (37%), Gaps = 39/291 (13%)
Query: 86 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
+LN +G++ K Q+L+ L P V YN + D A F ++K
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
I PD I+Y+ L + K+E+ KA + EMEK + +++L+ Y G ++
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+ M K + + V+ + K G+ +A I D+ + +V N ++ AY
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
I E A ++ G+ T+ LL G + Q
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ-------------------- 559
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
ID AE L+ TLRN G + YN+++ G
Sbjct: 560 -----------------IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 593
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+++ ++ +N K EA A+++ M YN +++ YI +G ++ +++++K
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 537
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ S +VTYNL L + + AE+ L+ + PD +SY+T+ S +K
Sbjct: 538 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM--------SLFAKMND 219
A L+EM K R Y +L+S + G ++ ++++M+ S++ M D
Sbjct: 598 ALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 657
Query: 220 AEYTC 224
A C
Sbjct: 658 AYVRC 662
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 122/321 (38%), Gaps = 42/321 (13%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTK--IDPDWISYSTLTSLYIKMELPEKAA 169
PD +N + AC + D + A + +++ PD SY+ + + + A
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM N + Y++++ + G + R+ +M+ K N Y ++S L
Sbjct: 215 KVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGL 274
Query: 230 VKLGEFEKAENIYDE----------------WESISGTGDPR------------------ 255
+ G ++ + DE ++ ++ TG+ R
Sbjct: 275 CRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGA 334
Query: 256 -VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ILL ++ AE LV G+ P + L GY + + F++
Sbjct: 335 YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQ 394
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
R PDH A N L + + AE L++ + +G S E +N+L+ Y A
Sbjct: 395 M--KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 374 GKMP--LIIVERMQKDNVQMD 392
G++ ++ MQ+ ++ D
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSD 473
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/241 (17%), Positives = 101/241 (41%), Gaps = 1/241 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T + L+ +Y + + ++ M + G + + ++ + NG++ + +L +
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ K+ +P+ YN + A D E A ++K + + ++Y+ L +
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A + + + R + V+Y++++S N G D+ L + ++M + Y
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHT 619
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S+L G E +Y + + + I++ AY+ S + KG
Sbjct: 620 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679
Query: 285 I 285
I
Sbjct: 680 I 680
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 127/247 (51%), Gaps = 35/247 (14%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSA--EAEALMEKMSECGFLKCPLPYNHMLNL 89
E FF+++P+ ++G ++LL SY ++ + + +AE EKM + G L P PYN M++L
Sbjct: 131 EKFFQSIPENLKGESIYTSLLKSYAKSGEISLRKAEYTFEKMRKLGMLLRPSPYNSMVSL 190
Query: 90 YISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y S +KV ++L+E+K+N D T N L A+ D T +K FL D
Sbjct: 191 YSSLRNRNKVDEILREMKENNLELDSPTVNNALRVYAAVCDVATMDK-FL--------AD 241
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
W + +TL L TTL EM K AY L+ LY G +++V RIW
Sbjct: 242 WNAITTLEWL-----------TTL-EMAK--------AY-RLIRLYGEAGEREDVYRIWD 280
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI-YDEWESISGTGDPRVPNILLAAYINR 267
+ K N+ + +I SL+KL + AE I YDEWES D R+P +L++ Y +
Sbjct: 281 LYKNTKEKDNEG-FRALIGSLLKLDDINGAEKIYYDEWESSGLEFDLRIPTMLMSGYRAK 339
Query: 268 NQLEMAE 274
++ A+
Sbjct: 340 GMVKKAD 346
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 32 ENFFEN-LPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FFE+ +P M+ LL SY ++ K+ +AE + EKM E GFL P+N +++L
Sbjct: 434 EKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELGFLSKLSPFNSIISL 493
Query: 90 YISNGQLDKVPQMLQELKKNT 110
YI +L KV ++L ++K+N
Sbjct: 494 YIEQRKLSKVNKLLCDMKQNN 514
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 42 MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
M G TCS LL+ ++ K A+AE ++E + G + + YN ++N Y L
Sbjct: 153 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 212
Query: 102 MLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ +++K ++ PD +TYN + AE +E++K+ +DP +++TL Y
Sbjct: 213 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 272
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
EK T L +M+++ + + +++ S++ + G E + I M+ N
Sbjct: 273 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +I + ++ G+ E+A + ++ ++ + N+LL +Q++ AE L
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+G++P ++ + KG +K LE ++
Sbjct: 393 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 115/285 (40%), Gaps = 5/285 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD +YN+ +A A K F E+ + P+WI+Y+T+ ++K E
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+M + N V Y+ LLS G DE + +M S + Y+ + L +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
GE +++ E +ILL ++ AE LV G+ P
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L GY + + F++ R PDH A N L + + AE L++
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQM--KSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251
Query: 352 LRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERMQKDNVQMDA 393
+ +G S E +N+L+ Y AG++ ++ MQ+ ++ D
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 296
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 45/360 (12%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVV 115
++ K ++A + ++M + G + + YN M++ ++ G L+ ++ Q L P++V
Sbjct: 28 RSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIV 87
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL-----------TSLYIKMEL 164
TYN+ L+ + E+ + PD +YS L T L + E
Sbjct: 88 TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 147
Query: 165 PEK----AATTLKEMEKRTCRKNRVA--------------------YSSLLSLYTNMGYK 200
+K A T + C+ +VA Y++L++ Y +
Sbjct: 148 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 207
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--N 258
I+++M S + + Y +I+ L KL KAE++ E E SG DP V N
Sbjct: 208 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK-SGV-DPSVETFN 265
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
L+ AY QLE + + + KGIK ++ + + K G++ + + I
Sbjct: 266 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI-- 323
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ P+ ++ + + E GD + A L+ ++N+G VS I YN LL+ ++ ++
Sbjct: 324 YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG-VSASIVTYNLLLKGLCRSSQI 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+++ ++ +N K EA A+++ M YN +++ YI +G ++ +++++K
Sbjct: 300 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 359
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ S +VTYNL L + + AE+ L+ + PD +SY+T+ S +K
Sbjct: 360 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 419
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM--------SLFAKMND 219
A L+EM K R Y +L+S + G ++ ++++M+ S++ M D
Sbjct: 420 ALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 479
Query: 220 AEYTC 224
A C
Sbjct: 480 AYVRC 484
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/241 (17%), Positives = 101/241 (41%), Gaps = 1/241 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T + L+ +Y + + ++ M + G + + ++ + NG++ + +L +
Sbjct: 262 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 321
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ K+ +P+ YN + A D E A ++K + + ++Y+ L +
Sbjct: 322 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 381
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A + + + R + V+Y++++S N G D+ L + ++M + Y
Sbjct: 382 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHT 441
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S+L G E +Y + + + I++ AY+ S + KG
Sbjct: 442 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501
Query: 285 I 285
I
Sbjct: 502 I 502
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 11/388 (2%)
Query: 34 FFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F EN+ PD C+ L+ + + K+ +A ++E + G + + YN M++ Y
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYC 183
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+++ +L + + SPDVVTYN L + + A + + + PD I+
Sbjct: 184 KAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L + +A L EM R C + V Y+ L++ G DE ++ M
Sbjct: 242 YTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S + N + ++ S+ G + AE + + + NIL+ + L
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A ++ G +P ++ L G+ K+ +M++ +E ++ + R PD
Sbjct: 362 RAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS--RGCYPDIVTYNT 419
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDN 388
L + G ++ A +L L + G I YN+++ AKAGK + +++ M+ +
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 389 VQMDAETQKVL--KITSEMPVSEVSSIF 414
++ D T L ++ E V E F
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 122/280 (43%), Gaps = 3/280 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F ++P P+ T + +L S + +AE L+ M GF + +N ++N
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G L + +L+++ K P+ ++YN L + + A + + PD +
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+T+ + K E A L ++ + C + Y++++ G + +++ +M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K + Y+ ++ L + G+ ++A + E+E + + N ++ Q
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQT 535
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ A F ++ +G KP T++ +L G +G ++ LE
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALE 575
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ E +P P++ S LLH + + KK A +E+M G + YN ML
Sbjct: 365 DILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+G+++ ++L +L K SP ++TYN + A A K E++ + PD
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+YS+L + ++A E E+ R N V ++S++ D +
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
M++ K + YT +I L G ++A + +E
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEALELLNE 579
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQ--AQALQTRARENFFENLPDKMRGPD--TCSALLHSYV 56
+E+ HG Q + SY + + RA E + E + + PD T + +L +
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE-YLERMVSRGCYPDIVTYNTMLTALC 425
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVV 115
++ K +A ++ ++S G + YN +++ G+ K ++L E++ K+ PD +
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY+ + + + + A K F E ++ + P+ ++++++ K ++A L M
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYM 545
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
R C+ +Y+ L+ G E L + ++
Sbjct: 546 INRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 163/375 (43%), Gaps = 24/375 (6%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A+ A + + E +P+ R LL + V + +AE + ++ E L PL
Sbjct: 325 ARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIRE---LSLPLT 381
Query: 83 Y---NHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
N ML LY +S ++ + +++ K+N + TY L + ND E+
Sbjct: 382 ISACNQMLLLYKRVSRNKVVDILTLME--KENIKYSIFTYKLMIDLKVRSNDILGMEQVL 439
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+K+ ++P++ + + YI EKA + ME + NR A SLL LY +
Sbjct: 440 NSMKENGLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHV-KANRHAVRSLLDLYAIL 498
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G +V R+W +L A+ ++ I + KLG E+AE I+D +
Sbjct: 499 GRPVDVERVW----NLCAEPKLEDFLAAIKAWSKLGHIERAEEIFDVLVKTFPKLTSKYF 554
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N +L Y L+ ++ F R+ G TW+ + Y+ G++ K + F +
Sbjct: 555 NAMLEVYAENKLLDKSKKFIERMCLDGCTIGPLTWDAVVKLYVNLGELSKA-DSF---LM 610
Query: 318 SVRKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+V + PD + ++Y L E+GDI AE + ++ + + YN LL YA
Sbjct: 611 NVTEDNPDRHPLFSSYVILLKAYAEKGDIHNAEKIFDRVKQTNFPARTLPYNLLLAAYAS 670
Query: 373 AGKMPLIIVERMQKD 387
A P ERM+ D
Sbjct: 671 AQVTPYGFRERMKAD 685
>gi|302811145|ref|XP_002987262.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
gi|300144897|gb|EFJ11577.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
Length = 564
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 165/382 (43%), Gaps = 18/382 (4%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
F LP + R D LL Y + +AE M+++ G +K PY+ ML+ Y
Sbjct: 89 LFRRLPKQWRSEDAYCILLELYYKRDMLEDAEKTMQELRGIG-IKSLQPYHLMLSFYKLR 147
Query: 94 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACAS-QNDKETAEKAFLELKKTKIDPDWIS 151
G + +M+ E+K + D Y + LAA S D E E++ + D +
Sbjct: 148 GMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVEDVLAEMEGRGLKLDAVG 207
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRT----CRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+ +Y++ L K+ L+ +EK + + +L+++ +G +D V RIW
Sbjct: 208 CLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKDSNSIRRRMLAMFGKLGDRDAVDRIW 267
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ A ++ I + ++G+ ++AE++Y + +PR+ N LA + +
Sbjct: 268 HS-IERSASTTVEDFIFGIEAFGRVGKMDEAEDMY--MRVGCNSCNPRLHNAFLAVLVEQ 324
Query: 268 NQLEMAESFYNRLVTKGIKPCYT--TWELLTWGYLKKGQMEK---VLECFKKAIGSVRKW 322
+ A + R+ KG++ + T+ LL YLK G + + E + A G +
Sbjct: 325 GDVIRAVALVERM--KGVRCLLSTVTYHLLIKVYLKAGDVSRATLAFESLRSAFGKLEWP 382
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPLIIV 381
P + GD+ +E L+ G +S +++SL R YAK G
Sbjct: 383 RPSSETLAVMLEFFVGIGDVQASERLVKKWMEDGFPLSAAVFHSLFRVYAKGGAGVDNFP 442
Query: 382 ERMQKDNVQMDAETQKVLKITS 403
RM V+ ET+++L+ S
Sbjct: 443 GRMLSAGVEPTRETEQLLRQIS 464
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 168/413 (40%), Gaps = 58/413 (14%)
Query: 49 SALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQ 104
S LL + + K++ EA + L+ + E G + YN +L + +GQ D + +M+
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
E SPDVV YN + + D A F E+ + I PD ++YS++ K
Sbjct: 212 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+KA L++M + + Y++L+ Y++ G E +R++K+M +
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331
Query: 225 VISSLVKLGEFEKAENIYDE--------------------------------WESISGTG 252
++ SL K G+ ++A +++D ++ + G G
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391
Query: 253 ---DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D N+L+ AY N L+ A +N + G+KP T+ + + G+M+ +
Sbjct: 392 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
E F + I + VPD G + A+ L+ + N G + + S++
Sbjct: 452 EKFNQMID--QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509
Query: 369 TYAKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEM 405
K G++ P +V M D + + +K L++ M
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 562
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 128/275 (46%), Gaps = 3/275 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + L+ S + K EA + + M+ G Y MLN Y + G L + +
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDL 383
Query: 103 LQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L +PD+ T+N+ + A A+ + A F E++ + P ++Y T+ + +
Sbjct: 384 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A +M + ++ AY L+ + G + + ++M+ +++
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I++L KLG A+NI+D ++ D V N+L+ Y ++E A ++ +V
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ GI+P + L GY K G++++ L F++ +
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD V YN+ + E A + F + I+P+ + Y TL + Y K+ ++ +
Sbjct: 534 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 593
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+EM ++ + + + Y+ ++ G + +M MN Y+ V+ L K
Sbjct: 594 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK 653
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
F++A ++ E +++ D N ++A ++E A+ + + G+ PC T
Sbjct: 654 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+ ++ LK+G +E+ + F + PD RL+ +L ++ +I
Sbjct: 714 YSIMITNLLKEGLVEEAEDMFSSMQNA--GCEPDSRLLNHVVRELLKKNEI 762
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 8/330 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L+ +Y Q ++ +EAEA + E + Y +L Y +GQL + ++ E+++N
Sbjct: 178 LIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNG 237
Query: 111 SPDVVT-YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P T YN +L E A + + +KK + + +Y + ++Y K P +
Sbjct: 238 IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSL 297
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+EM+ C+ N Y++L++ + G ++ ++++M + + Y ++ +
Sbjct: 298 RVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 357
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G + A I+ E + D NIL+ A+ + AE+ + L +G++P
Sbjct: 358 SRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTM 417
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ LL + + G + + E + S + PD + A N G +D E L
Sbjct: 418 KSHMLLLSAHARSGNVARCEEVMAQLHKSGLR--PDTFALNAMLNAYGRAGRLDDMERLF 475
Query: 350 VTLR-----NAGHVSTEIYNSLLRTYAKAG 374
+ +AG T YN L+ Y +AG
Sbjct: 476 AAMERGDGASAGAPDTSTYNVLVNAYGRAG 505
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 6/297 (2%)
Query: 83 YNHMLNLYISNGQLDKV-PQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y QL + + L+ P TY L L A AE E++
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P Y+ +K EKA + M+K CR N Y ++++Y
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPM 294
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
LR++++M S+ K N YT ++++ + G EKAE +++E + D N L+
Sbjct: 295 SSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 354
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK-AIGSVR 320
AY + A ++ + G +P ++ +L + + G ++ F++ +R
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMR 414
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ H L+ +A+ + G++ E ++ L +G T N++L Y +AG++
Sbjct: 415 PTMKSHMLLLSAHAR---SGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRL 468
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 155/377 (41%), Gaps = 10/377 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + + AE ++ +M G YN L+ + +K ++ Q
Sbjct: 208 DTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQR 267
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KK + TY L + N ++ + F E+K P+ +Y+ L + + + L
Sbjct: 268 MKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGL 327
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +EM++ + AY++L+ Y+ G I+ M + + + A Y
Sbjct: 328 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNI 387
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G ++AE + E + + +LL+A+ + E +L G
Sbjct: 388 LVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSG 447
Query: 285 IKPCYTTWELLTWGYLKKGQ---MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
++P + Y + G+ ME++ ++ G+ PD N G
Sbjct: 448 LRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGA-SAGAPDTSTYNVLVNAYGRAGY 506
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKV 398
+D E +L G + + + S + YA+ + L + E M DA T KV
Sbjct: 507 LDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKV 566
Query: 399 L--KITSEMPVSEVSSI 413
L + E V +V++I
Sbjct: 567 LLAACSDERQVEQVTAI 583
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 101/273 (36%), Gaps = 50/273 (18%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P+ C+ AL++++ + +AE + E+M + G YN ++ Y G +PQ
Sbjct: 310 PNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG----LPQG 365
Query: 103 LQEL-----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
E+ PD +YN+ + A + AE AF ELK+ + P S+ L S
Sbjct: 366 ASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLS 425
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVA------------------------------- 186
+ + + + ++ K R + A
Sbjct: 426 AHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAS 485
Query: 187 --------YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
Y+ L++ Y GY D + ++ + + + +T I + + E+ +
Sbjct: 486 AGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQC 545
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+++E D +LLAA + Q+E
Sbjct: 546 LRVFEEMVDAGCYPDAGTAKVLLAACSDERQVE 578
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN- 109
LL ++ ++ A E +M ++ + G N MLN Y G+LD + ++ +++
Sbjct: 423 LLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGD 482
Query: 110 ----TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+PD TYN+ + A + E AF L + D +++++ Y + +
Sbjct: 483 GASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEY 542
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM----SLFA 215
+ +EM C + LL+ ++ ++V I + M +LFA
Sbjct: 543 GQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDAKTLFA 596
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 146/325 (44%), Gaps = 9/325 (2%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
RAR+ F+ +P+K PD T S ++ Y +++ AEA +L +M G YN +
Sbjct: 701 RARK-LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
++ G ++K + +E+ + +++N + + A + F E+ +I
Sbjct: 760 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD ++Y+T+ + K E+A KEM++R + V Y+SL+ Y +G EV +
Sbjct: 820 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++KM++ K ++ Y VI + K +A + DE + ++L+ A
Sbjct: 880 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 939
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVP 324
R L A + + G+KP L + + G+M++ F+ K++G VP
Sbjct: 940 REDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLG----LVP 995
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLL 349
D + N D + A +L+
Sbjct: 996 DTTTLIDLVNGNLNDTDSEDARNLI 1020
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 146/329 (44%), Gaps = 4/329 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L+ Y + A L+++M + + + Y M+N L ++L+++
Sbjct: 405 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+VV Y++ + A AS+ E A + + + + PD Y+ + S K
Sbjct: 465 TFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 524
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A+T L E++ R + + V + + + Y+ G E + + +M+ N+ YT +
Sbjct: 525 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 584
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ K G +A +I+ ++ D + + + + +++ A ++ L KG+
Sbjct: 585 INGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 644
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K+G++EK E + ++ P+ + A + L + GDI A
Sbjct: 645 VPDVFTYSSLISGFCKQGEVEKAFELHDEM--CLKGIAPNIFIYNALVDGLCKSGDIQRA 702
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
L + G + Y++++ Y K+
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKS 731
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 161/394 (40%), Gaps = 26/394 (6%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + PD CSAL+ +++ E + + M CG + YN +++
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 380
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+++K ++L+ + P+ T+ L + +++ A + E++K + P +S
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y + + + A L++M + N V YS L+ Y + G +E R+ M
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ Y +IS L K G+ E+A E + D + Y ++
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 560
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHRLI 329
A +++ ++ G+ P + +L G+ K G + + L F++ A+G +PD +
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV----LPDVQTC 616
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM------------ 376
+A + L + G + A + L+ G V Y+SL+ + K G++
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 377 ----PLIIVERMQKDNVQMDAETQKVLKITSEMP 406
P I + D + + Q+ K+ MP
Sbjct: 677 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 135/300 (45%), Gaps = 12/300 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +++ G L ++L E+ +K +P+ Y+L + D + A + +
Sbjct: 231 YTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMG 290
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + P+ +Y+ +T+ + + +A T +EM+K + + A S+L+ + G D
Sbjct: 291 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
EVLRI M+S +N Y +I L K G+ EKA I ++ + R +L+
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLI 410
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLECFKKAIGS 318
Y + + A + + + + P ++ + G + K+LE K
Sbjct: 411 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE--KMTFSG 468
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
++ V + ++ AY +G I+ A LL + +G V+ +I YN+++ +KAGKM
Sbjct: 469 LKPNVVVYSILIMAY---ASEGRIEEARRLLDGMSCSG-VAPDIFCYNAIISCLSKAGKM 524
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/423 (19%), Positives = 167/423 (39%), Gaps = 81/423 (19%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
A+++ K + A L+EKM+ G + Y+ ++ Y S G++++ ++L +
Sbjct: 442 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC 501
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+PD+ YN ++ + E A LE++ + PD +++ Y K +
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----------------- 210
AA EM N Y+ L++ + G E L I++++
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621
Query: 211 -----------MSLFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEW------- 245
+ +F+++ + Y+ +IS K GE EKA ++DE
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681
Query: 246 ---------ESISGTGDPR--------VP-----------NILLAAYINRNQLEMAESFY 277
+ + +GD + +P + ++ Y + A S +
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY---N 334
+ + +KG++P + L G K+G MEK + F++ + + Y
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 801
Query: 335 KLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
K++E + + ++ HV+ Y +++ + KAGKM ++ + MQ+ N+ +D
Sbjct: 802 KIQEASQL--FQEMIAKQIMPDHVT---YTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 856
Query: 393 AET 395
T
Sbjct: 857 TVT 859
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 95/239 (39%), Gaps = 3/239 (1%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP--DVVTYNLWLAACASQNDKETAEKAF 137
P+ ++ +++ Y G LD+ + + KN S ++ N L E K +
Sbjct: 158 PVVFDILIDSYKRMGMLDEAANVFF-VAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+ K+ D +Y+ L K A L EM+++ N YS ++ +
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G DE + + + M N YT + + L + +A+ ++E + D
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ L+ ++ ++ + +V+ GI T+ +L G K G+MEK E K +
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMV 395
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 95/228 (41%), Gaps = 3/228 (1%)
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ + L Y +M + ++AA + + + + +SLL G + +++
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ + YT ++ +L K G+ A+ + E + + + ++++
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
++ A + KG+ P T+ ++T G + +M + F++ + K PD+
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK--PDYNAC 336
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+A + +GDID + + + G ++ YN L+ K GKM
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 384
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 145/339 (42%), Gaps = 18/339 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDKVPQM 102
T + ++H+Y + + + +A++ +M + +C P +N M++ G + +
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEK----RCVFPDVVTHNVMVDARFRAGDAEAAMAL 213
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + K P +VTYN L + A + F E+ + PD S++ L + +
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E+A KEM R + + V++S L+ L+ G D + ++M +
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT VI + G A + DE D N LL +L AE N +
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 393
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G+ P T+ L GY +G+++K L+ F + ++ PD + + QGD
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN--QRLRPDIVTYNTLIDGMCRQGD 451
Query: 342 IDGAEHLLVTLRN----AGHVSTEIYNSLLRTYAKAGKM 376
+D A L + + HV+ Y+ L+ ++ + G++
Sbjct: 452 LDKANDLWDDMHSREIFPNHVT---YSILIDSHCEKGQV 487
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 7/307 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
+ AL+ R LPD + T + LL+ + ++ +AE L+ +M E G
Sbjct: 348 SDALRVRDEMVGCGCLPDVV----TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 403
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+ +++ Y G+LDK Q+ L + PD+VTYN + Q D + A + ++
Sbjct: 404 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 463
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+I P+ ++YS L + + E A L EM + N + Y+S++ Y G
Sbjct: 464 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 523
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ + +KMM + Y +I +K + A + + E D N+L+
Sbjct: 524 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 583
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ ++ A + ++ KGI+P T+ + G++ G ++ + + + R
Sbjct: 584 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ--RG 641
Query: 322 WVPDHRL 328
+ PD +
Sbjct: 642 FAPDDKF 648
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 112/273 (41%), Gaps = 5/273 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
N+ + T N+ + + + + E++K + PD ++++ + +
Sbjct: 148 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA 207
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + M + + V Y+S+L G D+ ++K+M + +T +
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I ++GE E+A IY E D + L+ + R +++ A ++ + G+
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 327
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + ++ G+ + G M L + +G +PD N L ++ + A
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC--GCLPDVVTYNTLLNGLCKERRLLDA 385
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
E LL +R G V ++ + +L+ Y GK+
Sbjct: 386 EGLLNEMRERG-VPPDLCTFTTLIHGYCIEGKL 417
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++ + S +++N ++ + K EF+K + + E E D N+++ A
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
E A + + +V+KG+KP T+ + G + G +K E FK+ PD
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM--DDFGVAPDV 261
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
R T G+I+ A + +R+ G + ++ L+ +A+ GKM
Sbjct: 262 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ALL +Y + EA + + + + G + Y +LN Y + Q +K ++ E++K
Sbjct: 369 NALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRK 428
Query: 109 NTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N+ P+ V+YN + A S + A E++K I PD +S STL + + K
Sbjct: 429 NSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTK 488
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
T L+ + R N VAY+S + Y + G ++ L+++ MM+ + Y +IS
Sbjct: 489 IDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILIS 548
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L KLG++ ++ +++ + V + L+ +Y+ +++L AES + + G P
Sbjct: 549 GLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFP 608
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA---AYNKLEEQGDI 342
T+ + Y G V + FK+ G+ +PD + ++ A NK + G +
Sbjct: 609 DVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAI--LPDAIICSSLMEALNKGNQYGRV 664
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 35/313 (11%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP- 80
Q +FE + PDT + ++H V+ + +A L+ M E P
Sbjct: 270 NGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPD 329
Query: 81 -LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+ Y +++ Y GQ++ + + + P++V+YN L A AS A F
Sbjct: 330 VVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFK 389
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
LK+ + PD +SY+TL + Y + PEKA EM K +C+ N+V+Y++L+ Y + G
Sbjct: 390 LLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAG 449
Query: 199 YKDEVLRIWKKM------------MSLFAKMNDAEYTCVISSLVKLGEFEKAE-NI--YD 243
E + + +M +L A T I ++++ +F E NI Y+
Sbjct: 450 MFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYN 509
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
SG G +Y++ E A Y ++ + P T+ +L G K G
Sbjct: 510 -----SGIG----------SYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLG 554
Query: 304 QMEKVLECFKKAI 316
+ + L+ F+ +
Sbjct: 555 KYAESLKFFEDMV 567
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 163/414 (39%), Gaps = 36/414 (8%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
R +G ++ + +V QA+ L +E + PD D ++L++++ +
Sbjct: 152 RNDIYGMMIQLHARHNQVDQARGLFFEMQE--WRCKPDA----DIYNSLINAHARAGLWR 205
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWL 121
A +M+ M YN+++N + G K ++ +++ +N PD+VT+N+ L
Sbjct: 206 WAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVL 265
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRT- 179
+A + A F +K I PD + + + +K+ A L M EKR
Sbjct: 266 SAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQ 325
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C + V Y+S++ Y G + ++ M++ K N Y ++ + G +A
Sbjct: 326 CSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAF 385
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
I+ + D LL AY Q E A +N + KP ++ L Y
Sbjct: 386 GIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAY 445
Query: 300 LKKGQMEKVLECFKKAIGSVRKW-----VPDHRLIT---AAYNKLEEQGDIDGAEHLLVT 351
G FK+AI + + PD I+ AA + + ID
Sbjct: 446 GSAGM-------FKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKID------TV 492
Query: 352 LRNAGHVSTEI----YNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
L A E+ YNS + +Y G + L + M NV DA T +L
Sbjct: 493 LEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNIL 546
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 124/307 (40%), Gaps = 38/307 (12%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + S LL + + +++ + + ++E G + YN + Y+S G +K ++
Sbjct: 468 PDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKL 527
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ N +PD VTYN+ ++ + K F ++ +I YS+L Y+K
Sbjct: 528 YATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVK 587
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG--------YKD------------ 201
+ +A +T M+ C + + Y++++ YT+ G +K+
Sbjct: 588 QDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAII 647
Query: 202 ---------------EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
VL++ K M ++N Y +I+S L +++ A I + +
Sbjct: 648 CSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEIIEHLD 707
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S + N LL + E + ++V+ +T+++L L G+
Sbjct: 708 SSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSSCSTVGLSTYKVLLRNLLAVGKWR 767
Query: 307 KVLECFK 313
K +E +
Sbjct: 768 KYVEVLQ 774
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 168/413 (40%), Gaps = 58/413 (14%)
Query: 49 SALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQ 104
S LL + + K++ EA + L+ + E G + YN +L + +GQ D + +M+
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
E SPDVV YN + + D A F E+ + I PD ++YS++ K
Sbjct: 212 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+KA L++M + + Y++L+ Y++ G E +R++K+M +
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331
Query: 225 VISSLVKLGEFEKAENIYDEW-------ESISGT-----------------------GDP 254
++ SL K G+ ++A +++D + S T GD
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391
Query: 255 RVP-----NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
P N+L+ AY N L+ A +N + G+KP T+ + + G+M+ +
Sbjct: 392 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
E F + I + VPD G + A+ L+ + N G + + S++
Sbjct: 452 EKFNQMID--QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509
Query: 369 TYAKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEM 405
K G++ P +V M D + + +K L++ M
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 562
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 127/275 (46%), Gaps = 3/275 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + L+ S + K EA + + M+ G Y MLN Y + G L + +
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDL 383
Query: 103 LQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L +P + T+N+ + A A+ + A F E++ + P ++Y T+ + +
Sbjct: 384 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A +M + ++ AY L+ + G + + ++M+ +++
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I++L KLG A+NI+D ++ D V N+L+ Y ++E A ++ +V
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ GI+P + L GY K G++++ L F++ +
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD V YN+ + E A + F + I+P+ + Y TL + Y K+ ++ +
Sbjct: 534 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 593
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+EM ++ + + + Y+ ++ G + +M MN Y+ V+ L K
Sbjct: 594 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK 653
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
F++A ++ E +++ D N ++A ++E A+ + + G+ PC T
Sbjct: 654 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+ ++ +K+G +E+ + F + PD RL+ +L ++ +I
Sbjct: 714 YSIMITNLIKEGLVEEAEDMFSSMQNA--GCEPDSRLLNHVVRELLKKNEI 762
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 11/291 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PD+VTY + + + D + A ++++ K++P + Y+T+ K +
Sbjct: 8 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 67
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEME + R N V YSSL+S N G + R+ M+ + ++ +
Sbjct: 68 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 127
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTK 283
I + VK G+ +AE +YDE + + DP + L+ + ++L+ A+ + +V+K
Sbjct: 128 IDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P T+ L G+ K ++E+ +E F++ S R V + L + GD D
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 344 GAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
A+ + + + G V I YN+LL K GK+ +++ E +Q+ ++
Sbjct: 244 MAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 3/272 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +++ + + A L+ KM + L YN +++ +D +
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E++ K P+VVTY+ ++ + A + ++ + KI+PD ++S L ++K
Sbjct: 74 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+A EM KR+ + V YSSL++ + DE ++++ M+S +
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I K E+ ++ E G+ NIL+ +MA+ + +V
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ G+ P T+ L G K G++EK + F+
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 163/382 (42%), Gaps = 13/382 (3%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMR------GPDTCSALLHS 54
++R G Q +Y V L R + NL +KM G + ++
Sbjct: 4 IDRMVAKGCQPDLVTYGVVV---NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 55 YVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPD 113
+ K +A L ++M G + Y+ +++ + G+ ++L ++ ++ +PD
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
V T++ + A + AEK + E+ K IDP ++YS+L + + + ++A +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
M + C + V Y++L+ + +E + ++++M N Y +I L + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+ + A+ I+ E S + N LL +LE A + L ++P T+
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
++ G K G++E + F S++ PD + +G + A+ L ++
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNL--SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 358
Query: 354 NAGHV-STEIYNSLLRTYAKAG 374
G + ++ YN+L+R + G
Sbjct: 359 EDGTLPNSGCYNTLIRARLRDG 380
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 44/320 (13%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T SAL+ ++V+ K EAE L ++M + + Y+ ++N + + +LD+ QM
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + K+ PDVVTYN T K F + K+
Sbjct: 179 FEFMVSKHCFPDVVTYN-------------TLIKGFCKYKRV------------------ 207
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+ +EM +R N V Y+ L+ G D I+K+M+S N
Sbjct: 208 ----EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 263
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y ++ L K G+ EKA +++ + NI++ ++E + L
Sbjct: 264 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 323
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQ 339
KG+KP + + G+ +KG E+ FK K G++ + LI A
Sbjct: 324 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL----RD 379
Query: 340 GDIDGAEHLLVTLRNAGHVS 359
GD + + L+ +R+ G
Sbjct: 380 GDREASAELIKEMRSCGFAG 399
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 3/281 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++ + +S E L K GF+ +PYN +++ +I G ++ + +E+
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 415
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ +P VTY + N+ + A K ++K+ + D +Y TL + K
Sbjct: 416 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 475
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L E+ NR Y+S+++ + NM +E + ++KKM++ + YT +
Sbjct: 476 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 535
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L+K G A +I+ E S D R +L+ N+ Q E A + K +
Sbjct: 536 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNM 595
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
P + L G+ K+G +++ + + R VPD+
Sbjct: 596 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD--RGLVPDN 634
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 150/357 (42%), Gaps = 7/357 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++++ + V+ AEA L + M CG ++ Y G L ++ E+
Sbjct: 112 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 171
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+ VTY++ + C + E A + + E+K I S +++ Y+K +
Sbjct: 172 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A T + + N +++LLS G +E +W ++++ N Y +
Sbjct: 232 QNAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 290
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + A +Y E T + IL+ Y + +E A S ++R+ I
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P TT ++ G K G+ + + F K + + +VP + ++G+I+ A
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS--QGFVPTCMPYNTIIDGFIKEGNINLA 408
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
++ + G ST Y SL+ + K + L ++ M++ ++MD + L
Sbjct: 409 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 465
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 101/268 (37%), Gaps = 39/268 (14%)
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ D T ++ L AC + + AE+ FL+ K ++ D +YS
Sbjct: 36 VTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSI--------------- 80
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ LL L N GY L + ++M + + +T VI++
Sbjct: 81 -----------------FVHLLCLKPNSGY---ALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
VK G +A + D+ + + + V L+ Y + L A N + G+ P
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ +L G K G +EK E + + +R V I Y K + + A +
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN---AFTM 237
Query: 349 LVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+G + +N+LL K GKM
Sbjct: 238 FNDALESGLANVFTFNTLLSWLCKEGKM 265
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 152/339 (44%), Gaps = 14/339 (4%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G TCS LL+ ++ K + AE +++ + G + + YN ++N Y G+L+
Sbjct: 154 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 213
Query: 104 QELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
++K ++ PD +TYN + A+ +E++ ++P +++TL Y +
Sbjct: 214 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 273
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
EK L EM++ + N V+Y S+++ + G E + I M N Y
Sbjct: 274 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 333
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + V+ G ++A + ++ +S + N+L+ N++Q+ AE N L
Sbjct: 334 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 393
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLEC----FKKAIGS-VRKWVPDHRLITAAYNKLE 337
+ P ++ L +G ++K L+ K I S VR + H+LI+ L
Sbjct: 394 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY---HQLISG----LG 446
Query: 338 EQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
G ++ E+L + V S I+N ++ Y+K G
Sbjct: 447 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 130/294 (44%), Gaps = 7/294 (2%)
Query: 102 MLQELKKNTSP--DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
ML+ + ++ +P + +YN+ +A A + F E+ + + P+ I+Y+T+ +
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
IK E +M + N + Y+ LLS G E + +M S +
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y+ + L + G+ + +++ ++ T +ILL ++ +AE
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
LV G+ P + L GY + G++E F + R PDH A N L +
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM--KSRHIKPDHITYNALINGLCKA 238
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERMQKDNVQ 390
I A+ LL+ +++ G + + E +N+L+ Y + G++ I++ MQ++ ++
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++++++ +N K EA A+++ M L YN +++ Y+ +G D+ +++++K
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N SP +VTYNL + +Q+ AE+ L ++ PD +SY+TL S +K
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 418
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M K + Y L+S G +E+ +++KMM ++A + ++
Sbjct: 419 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 478
Query: 228 SLVKLGEFEKAENIYDE 244
+ K G KAE++ E
Sbjct: 479 AYSKYGNEIKAEDLRKE 495
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 152/368 (41%), Gaps = 20/368 (5%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYN 118
+ +A + ++M+E L + YN M++ +I G L+ ++ ++ P+ +TYN
Sbjct: 30 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 89
Query: 119 LWLAA-CASQNDKETAEKAFL-ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
+ L+ C + ET+ A L E+ K+ PD +YS L + + + +
Sbjct: 90 VLLSGLCRAGRMGETS--ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 147
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
K S LL+ G + + +++ Y +I+ + GE E
Sbjct: 148 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 207
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
A + + + +S D N L+ ++ A+ + G+ P T+ L
Sbjct: 208 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 267
Query: 297 WGYLKKGQMEKVLECF----KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
Y + GQ+EK CF + ++ V + I A+ K G I A +L +
Sbjct: 268 DAYGRTGQLEK---CFIVLSEMQENGLKPNVVSYGSIVNAFCK---NGKIPEAVAILDDM 321
Query: 353 RNAGHV-STEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL--KITSEMPV 407
+ + + ++YN+++ Y + G I+VE+M+ + + T +L + ++ +
Sbjct: 322 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 381
Query: 408 SEVSSIFS 415
SE I +
Sbjct: 382 SEAEEIIN 389
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 7/248 (2%)
Query: 18 QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+R+ AQ L ++N P +T + L+ +Y + + + ++ +M E G
Sbjct: 239 ERITNAQDLLMEMQDNGVN--PT----VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKA 136
+ Y ++N + NG++ + +L ++ K+ P+ YN + A + A
Sbjct: 293 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 352
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
++K I P ++Y+ L +A + + + V+Y++L+S
Sbjct: 353 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 412
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G D+ L + ++M K Y +IS L G + E +Y + + +
Sbjct: 413 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 472
Query: 257 PNILLAAY 264
NI++ AY
Sbjct: 473 HNIMVEAY 480
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 3/281 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++ + +S E L K GF+ +PYN +++ +I G ++ + +E+
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 533
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ +P VTY + N+ + A K ++K+ + D +Y TL + K
Sbjct: 534 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 593
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L E+ NR Y+S+++ + NM +E + ++KKM++ + YT +
Sbjct: 594 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 653
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L+K G A +I+ E S D R +L+ N+ Q E A + K +
Sbjct: 654 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNM 713
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
P + L G+ K+G +++ + + R VPD+
Sbjct: 714 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD--RGLVPDN 752
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 150/357 (42%), Gaps = 7/357 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++++ + V+ AEA L + M CG ++ Y G L ++ E+
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+ VTY++ + C + E A + + E+K I S +++ Y+K +
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A T + + N +++LLS G +E +W ++++ N Y +
Sbjct: 350 QNAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + A +Y E T + IL+ Y + +E A S ++R+ I
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P TT ++ G K G+ + + F K + + +VP + ++G+I+ A
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS--QGFVPTCMPYNTIIDGFIKEGNINLA 526
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
++ + G ST Y SL+ + K + L ++ M++ ++MD + L
Sbjct: 527 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 583
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 10/191 (5%)
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
AE+ FL+ K ++ D +YS L A + L+EM ++S+++
Sbjct: 177 AEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVIT 236
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
G E LR+ M++ MN A T ++ G A + +E IS +G
Sbjct: 237 ACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE---ISESG 293
Query: 253 DPRVPN-----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
VPN +L+ +E A FY+ + TKGI+ + + GYLK +
Sbjct: 294 --LVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 351
Query: 308 VLECFKKAIGS 318
F A+ S
Sbjct: 352 AFTMFNDALES 362
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 7/191 (3%)
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
+ LL L N GY L + ++M + + +T VI++ VK G +A + D+
Sbjct: 199 FVHLLCLKPNSGY---ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMV 255
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ + + V L+ Y + L A N + G+ P T+ +L G K G +E
Sbjct: 256 NCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIE 315
Query: 307 KVLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNS 365
K E + + +R V I Y K + + A + +G + +N+
Sbjct: 316 KAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN---AFTMFNDALESGLANVFTFNT 372
Query: 366 LLRTYAKAGKM 376
LL K GKM
Sbjct: 373 LLSWLCKEGKM 383
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 171/389 (43%), Gaps = 13/389 (3%)
Query: 34 FFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F E++ + PD C++L+ + + K+ +A +ME + + G + + YN +++ Y
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 195
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWI 150
+G++D Q+L + N +PDVVTYN L C S K+ E +L+K + PD I
Sbjct: 196 KSGEIDNALQVLDRM--NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK-ECYPDVI 252
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K +A L EM + + + V Y+ L++ G DE ++ M
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S + N + ++ S+ G + AE + + + NIL+ + L
Sbjct: 313 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 372
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A ++ G P ++ L G+ K+ +M++ +E + R PD
Sbjct: 373 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS--RGCYPDIVTYN 430
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
L + G +D A +L L + G I YN+++ +K GK + +++ M++
Sbjct: 431 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 490
Query: 388 NVQMDAETQKVL--KITSEMPVSEVSSIF 414
++ D T L ++ E V E F
Sbjct: 491 GLKPDIITYSSLVSGLSREGKVDEAIKFF 519
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 4/227 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
Q L RA + E +P P++ S LLH + + KK A ++ M G +
Sbjct: 369 QGLLGRAID-ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 427
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN +L +G++D ++L +L K SP ++TYN + + E A K E+
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 487
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
++ + PD I+YS+L S + ++A ++E R N + Y+S++
Sbjct: 488 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 547
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
D + M+S K +A YT +I + G ++A ++ +E S
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 594
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 155/346 (44%), Gaps = 6/346 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FFE + P+ T + ++ +Y + K+ EA L+ M G L YN ++N
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++++ +L E+ +K +PD VTYN + + A E+ + + PD +
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y++L + K +A +M R R N V Y+SL++ ++ G+ DE RIW +M
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ Y +++ G E+A + E + D + ++A + +L
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL 464
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A +V KG+ P T+ L G ++ ++ + + F++ + + +PD T
Sbjct: 465 DRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN--KSLLPDEFTYT 522
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
+ N ++GD++ A +L + G + T YN L+ K +
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQAR 568
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 4/267 (1%)
Query: 112 PDVVTYNLWLAACA-SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
P V++YN L + + AEK + E+ + + + SY+ L + E
Sbjct: 165 PGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR 224
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+EME+ C N V Y++++ Y + DE ++ + M + N Y VI+ L
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
++G E+ + E + D N L+ Y A ++ ++ G+ P
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T+ L K G + + +E F + VR P+ T+ N ++G +D A +
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQM--HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWD 402
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ +G T + YN+LL + +G+M
Sbjct: 403 EMIRSGFPPTIVTYNALLNGHCVSGRM 429
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 172/381 (45%), Gaps = 26/381 (6%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
RA E FF+ + + P+ T ++L++ + Q EA + ++M GF + YN +
Sbjct: 361 RAME-FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419
Query: 87 LNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
LN + +G++++ +L+ ++ K SPDVV+Y+ +A + + A + E+ + +
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
PD I+YS+L + +A +EM ++ + Y+SL++ Y G +E L
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALN 539
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI-----YDEWESISGTGDPRVPNI- 259
+ +M+ + Y +I+ L K +A+ + YDE T D + +
Sbjct: 540 LHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCS 599
Query: 260 ---------LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
L+ + + + A+ + ++ + KP + ++ G+ + G + K +
Sbjct: 600 DIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHK 659
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV--TLRNAGHVSTEIYNSLLR 368
+K+ + ++P I A L +G +D +L++ LR+ E+ +L++
Sbjct: 660 LYKEMVDF--GFIPHTVTIIALVKALYSEG-MDEQLNLVIRDILRSCKLSDAELSKALVQ 716
Query: 369 TYAKAGKMPLI--IVERMQKD 387
K G + + ++ M KD
Sbjct: 717 INHKEGNIDAVFNLLTEMAKD 737
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 144/330 (43%), Gaps = 8/330 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L+ +Y Q ++ +EAEA + E + Y +L Y +GQL + ++ E+++N
Sbjct: 178 LIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNG 237
Query: 111 SPDVVT-YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P T YN +L E A + + +KK + + +Y+ + ++Y K P +
Sbjct: 238 IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSL 297
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+EM+ C+ N Y++L++ + G ++ ++++M + + Y ++ +
Sbjct: 298 RVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 357
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G + A I+ E + D NIL+ A+ + AE+ + L +G++P
Sbjct: 358 SRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTM 417
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ LL + + G + + E + S + PD + A N G +D E L
Sbjct: 418 KSHMLLLSAHARSGNVARCEEVMAQLHKSGLR--PDTFALNAMLNAYGRAGRLDDMERLF 475
Query: 350 VTLRN-----AGHVSTEIYNSLLRTYAKAG 374
+ AG T YN ++ Y +AG
Sbjct: 476 AAMERGDGAIAGAPDTSTYNVMVNAYGRAG 505
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 6/297 (2%)
Query: 83 YNHMLNLYISNGQLDKV-PQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y QL + + L+ P TY L L A AE E++
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P Y+ +K EKA + M+K CR N Y+ ++++Y
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPM 294
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
LR++++M S+ K N YT ++++ + G EKAE +++E + D N L+
Sbjct: 295 SSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 354
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK-AIGSVR 320
AY + A ++ + G +P ++ +L + + G ++ F++ +R
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMR 414
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ H L+ +A+ + G++ E ++ L +G T N++L Y +AG++
Sbjct: 415 PTMKSHMLLLSAHAR---SGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRL 468
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 155/377 (41%), Gaps = 10/377 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + + AE ++ +M G YN L+ + +K ++ Q
Sbjct: 208 DTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQR 267
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KK + TY L + N ++ + F E+K P+ +Y+ L + + + L
Sbjct: 268 MKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGL 327
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +EM++ + AY++L+ Y+ G I+ M + + + A Y
Sbjct: 328 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNI 387
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G ++AE + E + + +LL+A+ + E +L G
Sbjct: 388 LVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSG 447
Query: 285 IKPCYTTWELLTWGYLKKGQ---MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
++P + Y + G+ ME++ ++ G++ PD N G
Sbjct: 448 LRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAI-AGAPDTSTYNVMVNAYGRAGY 506
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKV 398
+D E +L G + + + S + YA+ + L + E M DA T KV
Sbjct: 507 LDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKV 566
Query: 399 L--KITSEMPVSEVSSI 413
L + E V +V +I
Sbjct: 567 LLAACSDERQVEQVKAI 583
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 103/278 (37%), Gaps = 50/278 (17%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P+ C+ AL++++ + +AE + E+M + G YN ++ Y G +PQ
Sbjct: 310 PNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG----LPQG 365
Query: 103 LQEL-----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
E+ PD +YN+ + A + AE AF ELK+ + P S+ L S
Sbjct: 366 ASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLS 425
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVA------------------------------- 186
+ + + + ++ K R + A
Sbjct: 426 AHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAI 485
Query: 187 --------YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
Y+ +++ Y GY D + ++ + + + +T I + + E+ +
Sbjct: 486 AGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQC 545
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+++E D +LLAA + Q+E ++
Sbjct: 546 LRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAI 583
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN- 109
LL ++ ++ A E +M ++ + G N MLN Y G+LD + ++ +++
Sbjct: 423 LLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGD 482
Query: 110 ----TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+PD TYN+ + A + E AF L + D +++++ Y + +
Sbjct: 483 GAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEY 542
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM----SLFA 215
+ +EM C + LL+ ++ ++V I + M +LFA
Sbjct: 543 GQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKDAKTLFA 596
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 145/339 (42%), Gaps = 18/339 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDKVPQM 102
T + ++H+Y + + + +A++ +M + +C P +N M++ G + +
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEK----RCVFPDVVTHNVMVDARFRAGDAEAAMAL 152
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + K P +VTYN L + A + F E+ + PD S++ L + +
Sbjct: 153 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E+A KEM R + + V++S L+ L+ G D + ++M +
Sbjct: 213 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 272
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT VI + G A + DE D N LL +L AE N +
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 332
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G+ P T+ L GY +G+++K L+ F + ++ PD + + QGD
Sbjct: 333 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN--QRLRPDIVTYNTLIDGMCRQGD 390
Query: 342 IDGAEHLLVTLRN----AGHVSTEIYNSLLRTYAKAGKM 376
+D A L + + HV+ Y+ L+ ++ + G++
Sbjct: 391 LDKANDLWDDMHSREIFPNHVT---YSILIDSHCEKGQV 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 5/289 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
+ AL+ R LPD + T + LL+ + ++ +AE L+ +M E G
Sbjct: 287 SDALRVRDEMVGCGCLPDVV----TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 342
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+ +++ Y G+LDK Q+ L + PD+VTYN + Q D + A + ++
Sbjct: 343 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 402
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+I P+ ++YS L + + E A L EM + N + Y+S++ Y G
Sbjct: 403 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 462
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ + +KMM + Y +I +K + A + + E D N+L+
Sbjct: 463 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 522
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ ++ A + ++ KGI+P T+ + G++ G ++ +
Sbjct: 523 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 571
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ ++ + + ++A + ++M CG L + YN +LN +L +L E++
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ PD+ T+ + + + A + F + ++ PD ++Y+TL + +K
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +M R N V YS L+ + G ++ +M++ N Y +I
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 453
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ G K + + + D N L+ YI +++ A N + + ++P
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKK 314
T+ +L G+ G +++ F+K
Sbjct: 514 DVVTYNMLINGFSVHGNVQEAGWIFEK 540
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 112/273 (41%), Gaps = 5/273 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
N+ + T N+ + + + + E++K + PD ++++ + +
Sbjct: 87 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA 146
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + M + + V Y+S+L G D+ ++K+M + +T +
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I ++GE E+A IY E D + L+ + R +++ A ++ + G+
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 266
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + ++ G+ + G M L + +G +PD N L ++ + A
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC--GCLPDVVTYNTLLNGLCKERRLLDA 324
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
E LL +R G V ++ + +L+ Y GK+
Sbjct: 325 EGLLNEMRERG-VPPDLCTFTTLIHGYCIEGKL 356
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ S+ + + +A +++M G L + YN ++ Y +G + K + LQ++
Sbjct: 412 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 471
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
N SPD++TYN + ++ A K ++K K+ PD ++Y+ L + +
Sbjct: 472 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 531
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
++A ++M + +R Y S+++ + G E ++ +M+
Sbjct: 532 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 577
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+ + ++ PD T + L+ + +A L + M + Y+ +++ +
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
GQ++ L E+ K P+++TYN + + +K ++ K+ PD I
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL YIK + A L MEK + + V Y+ L++ ++ G E I++KM
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ + + Y +I+ V G ++A ++DE
Sbjct: 542 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 575
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++ + S +++N ++ + K EF+K + + E E D N+++ A
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
E A + + +V+KG+KP T+ + G + G +K E FK+ PD
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM--DDFGVAPDV 200
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
R T G+I+ A + +R+ G + ++ L+ +A+ GKM
Sbjct: 201 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LP+ M T ++++ Y ++ ++ + ++KM + YN +++ YI ++
Sbjct: 442 LPNIM----TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497
Query: 98 KVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
++L ++K PDVVTYN+ + + + + A F ++ I+PD +Y ++
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ ++ ++A EM +R K R A + + N+ E L K M +
Sbjct: 558 NGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGT---VQFVNIQNSAESL----KQMPM--- 607
Query: 217 MNDAEYTCVISSLVKLGEF 235
D + TC I K EF
Sbjct: 608 --DLKVTCSIYFFAKTQEF 624
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 5/270 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + +H QN + A +M+ M + G YN ++N NG+LD+
Sbjct: 298 PDQV----TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDE 353
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ Q + + PD T+N + A SQN E A EL + PD +++ L +
Sbjct: 354 AKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILIN 413
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K+ P +EM+ C + V Y+ L+ +MG L + K+M S
Sbjct: 414 ALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPR 473
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I +L K E+AE ++D+ ++ + N L+ +++ A
Sbjct: 474 STVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI 533
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
++V +G++P T+ + Y K+G ++K
Sbjct: 534 EQMVKEGLQPSNITYNSILTHYCKQGDLKK 563
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 165/404 (40%), Gaps = 15/404 (3%)
Query: 24 QALQTRARENFFENLPDKMR------GPDTCSALLHSYVQNKKSAEAEALME-KMSECGF 76
Q L T + E L +MR G + + SY + ++ +A L+ +++ G
Sbjct: 97 QKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGV 156
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 135
YNH+LN+ ++ + + E+ + PDVVT N + A + TA
Sbjct: 157 QADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVL 216
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
E+ + PD +++TL +I+ E A +M + C RV + L++ Y
Sbjct: 217 MLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYC 276
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
MG ++ L +K ++ + + Y + L + G A + D D
Sbjct: 277 KMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVF 336
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
N ++ +L+ A+ N++V +G P TT+ L + ++E+ L+ ++
Sbjct: 337 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+V+ PD N L + GD L ++++G E+ YN L+ G
Sbjct: 397 --TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 375 KM--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
K+ L +++ M+ + T + + +M + E +F
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 47/279 (16%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACA 125
L E+M G + YN +++ S G+L +L+E++ N P VTYN + A
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486
Query: 126 SQNDKETAEKAFLEL--------------------KKTKID---------------PDWI 150
Q E AE+ F ++ K +ID P I
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+++ + Y K +KAA L+ M + V Y +L++ G L++ + M
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR--- 267
+ Y VI SL + A +++ E + G+P P+ L + R
Sbjct: 607 RIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEV---GEP--PDALTYKIVFRGLC 661
Query: 268 ---NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++ A F +V KG P ++++ +L G L G
Sbjct: 662 RGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 700
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/273 (17%), Positives = 109/273 (39%), Gaps = 3/273 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + L+ + + EA L +++ G +N ++N G ++
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+K + +PD VTYN+ + S A E++ ++Y+T+ K
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+A +M+ ++ V +++L+ D+ + ++M+ + ++
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +++ K G+ +KA +I + + D L+ + ++A +
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KGI+P + + ++ + L F++
Sbjct: 608 IKGIRPTPKAYNPVIQSLFRRNNLRDALSLFRE 640
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 163/380 (42%), Gaps = 14/380 (3%)
Query: 48 CSALLHSYV-------QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
C+ +H+Y +NKK +A ALMEK++ G YN +LN G+L++
Sbjct: 161 CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220
Query: 101 QMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
+L+++ N +PDVVTY + + A K F E+ + D + Y+ L
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGL 280
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
++ +A++ K M + C + V S+++ G +RI+K M + N+
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 340
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y+ +I L K + + A + + + T D NIL+ +E A +F++
Sbjct: 341 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
++ G KP T+ +L G+ K G + F S P+ + L ++
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM--SSSHCSPNVVTYGTLISGLCKR 458
Query: 340 GDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNV-QMDAET 395
+ A ++ G + +Y+SL+ K+GK+ ++ + M++ V T
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRT 518
Query: 396 QKVLKITSEMPVSEVSSIFS 415
+ + + V E S+F+
Sbjct: 519 RLIFHLCKANRVDEAVSLFN 538
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
T PD +++ L + Y PE+A ++EME+ Y SL T+ +
Sbjct: 88 TTFLPDVETWNVLITGYCLAREPEEAFAVIREMEED--------YGVAPSLKTH----NL 135
Query: 203 VLRIWKKMMSLFAKMNDAEYT----CVI-----SSLVK-LGEFEKAENIYDEWESISGTG 252
VL K + A M+ E T C I +++V L + +K ++ E I+ G
Sbjct: 136 VLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANG 195
Query: 253 -DPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
P + N LL +LE A ++V G P T+ L G K+ + +
Sbjct: 196 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 255
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLR 368
+ FK+ ++R V D TA L + G I A + T+ + G V + ++++
Sbjct: 256 KLFKEM--ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 313
Query: 369 TYAKAGKM 376
KAG++
Sbjct: 314 GLCKAGRI 321
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 156/338 (46%), Gaps = 10/338 (2%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T S L+ S + K EA + + M+ G YN MLN Y + G L
Sbjct: 324 LPDVV----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 379
Query: 98 KVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ + L +PD T+N+ + A A+ + A F E++ + PD ++Y T+
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 439
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ ++ + A +M + ++ AY+ L+ + G + + ++M+
Sbjct: 440 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ ++ +I++L KLG A+NI+D ++ D V N+L+ Y ++E A
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
++ +V+ GI+P + L GY K G++++ L F++ + R P L + + L
Sbjct: 560 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ--RGIKPSTILYSIIIDGL 617
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAK 372
E G A+ + +G ++ +I YN +LR K
Sbjct: 618 FEAGRTVPAKMKFHEMTESG-IAMDICTYNIVLRGLFK 654
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 150/332 (45%), Gaps = 9/332 (2%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQEL 106
LL + + K++ EA + L+ + E G + Y+ +L +GQ D + +M+ E
Sbjct: 155 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 214
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SP+VV YN + + D A F E+ + I PD ++Y+++ K +
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 274
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA L++M + N Y++L+ Y++ G E +R++K+M + + ++
Sbjct: 275 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 334
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
SL K G+ ++A +++D D NI+L Y + L ++ ++ GI
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 394
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + T+ +L Y G ++K + F + V+ V +R + AA ++ G +D A
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI---GKMDDA 451
Query: 346 EHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
+ + G + YN L++ + G +
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 483
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 4/292 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ + ++G L K +++ E+ N D+V ++ + A+ F
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 529
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD + Y+ L Y + EKA M N V Y +L++ Y +G D
Sbjct: 530 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 589
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E L ++++M+ K + Y+ +I L + G A+ + E D NI+L
Sbjct: 590 EGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ A + L +K T + G + ++E+ + F S +
Sbjct: 650 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI--SRSR 707
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
VP + L ++G ++ AE + +++NAG ++ + N ++R K
Sbjct: 708 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 759
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 151/341 (44%), Gaps = 15/341 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
SA++ S ++ + ++A+ L +M E G YN M+ + S+G+ Q+LQE L+
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SPDVVTYN + A + A + + E+ I P+ I+Y+++ + K + +
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 378
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M + C + +++L+ Y D+ + + +M N Y +I
Sbjct: 379 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 438
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK---- 283
+G+ A ++ + S D N LL + +L+ A + +
Sbjct: 439 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 498
Query: 284 -------GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
G++P T+ +L G + +G+ + E +++ R VPD ++ + L
Sbjct: 499 DASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGL 556
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+Q +D A + V++ + + +N+L+ Y KAG++
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 597
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 154/374 (41%), Gaps = 51/374 (13%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+N F + +K PD T ++++ + + + ++AE L+++M E + YN ++N
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ G+ + ++ E L + P+ +TYN + Q+ + AE F + PD
Sbjct: 335 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++TL Y + + L EM +R N V Y++L+ + +G + L + +
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 454
Query: 209 KMMS----------------------------LFAKM-------------NDAE-----Y 222
+M+S +F M N E Y
Sbjct: 455 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 514
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I L+ G+F +AE +Y+E D + ++ +++L+ A + + +
Sbjct: 515 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 574
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
K P T+ L GY K G+++ LE F + R V D + + G+I
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM--GRRGIVADAIIYITLIYGFRKVGNI 632
Query: 343 DGAEHLLVTLRNAG 356
+GA + + ++G
Sbjct: 633 NGALDIFQEMISSG 646
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 156/375 (41%), Gaps = 58/375 (15%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+FF + + P+ T + L++ + + EA AL+++M E G + Y +++
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 91 ISNGQLDKVPQMLQELKK--NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
G +L+++++ + P+VV Y+ + + A+ F E+++ I PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+++ + A L+EM +R + V Y++L
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL------------------ 331
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
I++ VK G+F +A +YDE + N ++ + ++
Sbjct: 332 -----------------INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 374
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+L+ AE + + TKG P T+ L GY +++ +E + +P L
Sbjct: 375 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE--------MPRRGL 426
Query: 329 I--TAAYNKLEEQ----GDIDGAEHLLVTLRNAGHVSTEIY--NSLLRTYAKAGKM--PL 378
+ T YN L GD++ A L + ++G V +I N+LL GK+ L
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDAL 485
Query: 379 IIVERMQKDNVQMDA 393
+ + MQK + +DA
Sbjct: 486 EMFKAMQKSKMDLDA 500
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 132/308 (42%), Gaps = 17/308 (5%)
Query: 80 PLP----YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAE 134
PLP + ++ + + + D V + Q++ +K D+ ++N+ + S + A
Sbjct: 75 PLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFAL 134
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
F ++ K + PD ++++TL + +A +M + TCR N V +++L++
Sbjct: 135 STFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGL 194
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G E + + +MM + Y ++ + K G+ A N+ + E +S
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI--- 251
Query: 255 RVPNILLAAYI-----NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+PN+++ + I + A++ + + KGI P T+ + G+ G+
Sbjct: 252 -IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLR 368
+ ++ + RK PD A N ++G A L + G + I YNS++
Sbjct: 311 QLLQEMLE--RKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 368
Query: 369 TYAKAGKM 376
+ K ++
Sbjct: 369 GFCKQDRL 376
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 123/305 (40%), Gaps = 17/305 (5%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A E+ F + K PD T + L+ Y K+ + L+ +M G + + YN ++
Sbjct: 378 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437
Query: 88 NLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ + G L+ + Q+ + PD+VT N L + A + F ++K+K+D
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 497
Query: 147 -----------PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
PD ++Y+ L I +A +EM R + + YSS++
Sbjct: 498 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
DE +++ M S N + +I+ K G + ++ E D
Sbjct: 558 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 617
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLECF 312
+ L+ + + A + +++ G+ P T + G+ K ++E+ +LE
Sbjct: 618 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Query: 313 KKAIG 317
+ ++G
Sbjct: 678 QMSVG 682
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/246 (17%), Positives = 105/246 (42%), Gaps = 2/246 (0%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A F ++ +++ P + + L + ++ME P+ + ++ME++ R + +++ L
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + + L + K+ L + +T ++ L +A + + + +
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ L+ ++ A + +R++ G++P T+ + G KKG L
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+K + V +P+ + +A + L + G A++L ++ G YNS++
Sbjct: 241 LLRK-MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 370 YAKAGK 375
+ +G+
Sbjct: 300 FCSSGR 305
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 158/349 (45%), Gaps = 12/349 (3%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
A LH + + SA A AL + C +N ML + G+ + ++L+++ +
Sbjct: 86 ASLHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR- 144
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKA 168
P+ VTYN +A ++ + A + E++ + I PD +Y+TL S + K+ E A
Sbjct: 145 --PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDA 202
Query: 169 ATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A EM + + V Y++L+ Y + G D L+ + M+ M A Y ++
Sbjct: 203 AKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVH 262
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L G A + +E + + D NIL+ Y + A + + KG++
Sbjct: 263 ALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRA 322
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAE 346
T+ L + + +KGQ+++ FK A V+K + PD + A N GD++ A
Sbjct: 323 TAVTYTSLIYAFSRKGQVQETDRLFKVA---VKKGIRPDVVMYNALINSHCAGGDMERAF 379
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMD 392
++ + ++ YN+L+R + G++ +++ M K +Q D
Sbjct: 380 EIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD 428
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 11/244 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ Y G+LD Q +++ ++ + V TYNL + A A E++
Sbjct: 222 YNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQ 281
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + PD +Y+ L + Y K +KA +EM ++ R V Y+SL+ ++ G
Sbjct: 282 RNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQ 341
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E R++K + + + Y +I+S G+ E+A I E E D N L+
Sbjct: 342 ETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLI 401
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ +L+ A + + +GI+P G K GQ + K+ +G +
Sbjct: 402 RGFCLLGRLDEARGLIDEMTKRGIQP--------DLGLCKNGQGDDAENLMKEMVG--KG 451
Query: 322 WVPD 325
PD
Sbjct: 452 ITPD 455
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 171/389 (43%), Gaps = 13/389 (3%)
Query: 34 FFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F E++ + PD C++L+ + + K+ +A +ME + + G + + YN +++ Y
Sbjct: 79 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 138
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWI 150
+G++D Q+L + N +PDVVTYN L C S K+ E +L+K + PD I
Sbjct: 139 KSGEIDNALQVLDRM--NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK-ECYPDVI 195
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K +A L EM + + + V Y+ L++ G DE ++ M
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S + N + ++ S+ G + AE + + + NIL+ + L
Sbjct: 256 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 315
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A ++ G P ++ L G+ K+ +M++ +E + R PD
Sbjct: 316 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS--RGCYPDIVTYN 373
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
L + G +D A +L L + G I YN+++ +K GK + +++ M++
Sbjct: 374 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 433
Query: 388 NVQMDAETQKVL--KITSEMPVSEVSSIF 414
++ D T L ++ E V E F
Sbjct: 434 GLKPDIITYSSLVSGLSREGKVDEAIKFF 462
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 4/227 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
Q L RA + E +P P++ S LLH + + KK A ++ M G +
Sbjct: 312 QGLLGRAID-ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 370
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN +L +G++D ++L +L K SP ++TYN + + E A K E+
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 430
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
++ + PD I+YS+L S + ++A ++E R N + Y+S++
Sbjct: 431 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 490
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
D + M+S K +A YT +I + G ++A ++ +E S
Sbjct: 491 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 537
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 152/339 (44%), Gaps = 14/339 (4%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G TCS LL+ ++ K + AE +++ + G + + YN ++N Y G+L+
Sbjct: 202 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 261
Query: 104 QELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
++K ++ PD +TYN + A+ +E++ ++P +++TL Y +
Sbjct: 262 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 321
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
EK L EM++ + N V+Y S+++ + G E + I M N Y
Sbjct: 322 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 381
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + V+ G ++A + ++ +S + N+L+ N++Q+ AE N L
Sbjct: 382 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 441
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLEC----FKKAIGS-VRKWVPDHRLITAAYNKLE 337
+ P ++ L +G ++K L+ K I S VR + H+LI+ L
Sbjct: 442 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY---HQLISG----LG 494
Query: 338 EQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
G ++ E+L + V S I+N ++ Y+K G
Sbjct: 495 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 533
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 138/315 (43%), Gaps = 7/315 (2%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTSP--DVVTYNLWLAACASQNDKETAEKAFL 138
+N + ++ G L + ML+ + ++ +P + +YN+ +A A + F
Sbjct: 28 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFD 87
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ + + P+ I+Y+T+ +IK E +M + N + Y+ LLS G
Sbjct: 88 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 147
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
E + +M S + Y+ + L + G+ + +++ ++ T +
Sbjct: 148 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 207
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
ILL ++ +AE LV G+ P + L GY + G++E F +
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM--K 265
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP 377
R PDH A N L + I A+ LL+ +++ G + + E +N+L+ Y + G++
Sbjct: 266 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 325
Query: 378 --LIIVERMQKDNVQ 390
I++ MQ++ ++
Sbjct: 326 KCFIVLSEMQENGLK 340
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++++++ +N K EA A+++ M L YN +++ Y+ +G D+ +++++K
Sbjct: 347 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 406
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N SP +VTYNL + +Q+ AE+ L ++ PD +SY+TL S +K
Sbjct: 407 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 466
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M K + Y L+S G +E+ +++KMM ++A + ++
Sbjct: 467 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 526
Query: 228 SLVKLGEFEKAENIYDE 244
+ K G KAE++ E
Sbjct: 527 AYSKYGNEIKAEDLRKE 543
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 152/368 (41%), Gaps = 20/368 (5%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYN 118
+ +A + ++M+E L + YN M++ +I G L+ ++ ++ P+ +TYN
Sbjct: 78 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137
Query: 119 LWLAA-CASQNDKETAEKAFL-ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
+ L+ C + ET+ A L E+ K+ PD +YS L + + + +
Sbjct: 138 VLLSGLCRAGRMGETS--ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 195
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
K S LL+ G + + +++ Y +I+ + GE E
Sbjct: 196 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 255
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
A + + + +S D N L+ ++ A+ + G+ P T+ L
Sbjct: 256 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 315
Query: 297 WGYLKKGQMEKVLECF----KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
Y + GQ+EK CF + ++ V + I A+ K G I A +L +
Sbjct: 316 DAYGRTGQLEK---CFIVLSEMQENGLKPNVVSYGSIVNAFCK---NGKIPEAVAILDDM 369
Query: 353 RNAGHV-STEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL--KITSEMPV 407
+ + + ++YN+++ Y + G I+VE+M+ + + T +L + ++ +
Sbjct: 370 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 429
Query: 408 SEVSSIFS 415
SE I +
Sbjct: 430 SEAEEIIN 437
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 7/331 (2%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A F+ + DK PD T ++ + + ++ EA ++ K+ E G + + YN ++
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
Query: 88 NLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ + G LDK E+ + V TYNL + A + E AE E+++ ++
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD ++Y+ + Y + +KA + EM ++ R Y+SL+ ++ E
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK 449
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+KK + + + +I G ++A + E ++ D N L+ Y
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR 509
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPD 325
++E A+ + + +GIKP + ++ L GY K+G M+ LE F + + +
Sbjct: 510 ERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLT 569
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+ + Y+K+ G+ D AE LL +++ G
Sbjct: 570 YNALIQGYSKI---GEADHAEELLREMQSKG 597
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N M+N+ G+ K + ++ P+VVTYN + + E A K F +K
Sbjct: 220 FNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMK 279
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +Y++ S K E+A+ L ++ + N V Y++L+ N G D
Sbjct: 280 DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLD 339
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ +MM+ + Y +I +L E+AE++ E D NI +
Sbjct: 340 KAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
Y + A S ++ +V K I+P T+ L + K+ +M + E FKK+I
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIK--EG 457
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+PD + A + G+ID A LL + NA V E+ +N+L++ Y + K+
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKV 513
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
+ A +R+ +A+ + RE E PD + T + ++ Y + + +A +L ++
Sbjct: 364 IHALFLEKRIEEAEDMIKEMREKGVE--PDVV----TYNIQINGYCRCGNAKKALSLFDE 417
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQND 129
M E Y +++++ ++ + + ++ +K+ PD++ +N + +
Sbjct: 418 MVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGN 477
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
+ A + E+ K+ PD ++++TL Y + E+A L EM++R + + ++Y++
Sbjct: 478 IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNT 537
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L+S Y+ G + L ++ +M+SL Y +I K+GE + AE + E +S
Sbjct: 538 LISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG 597
Query: 250 GTGD 253
T D
Sbjct: 598 ITPD 601
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 33 NFFENLPDKMRGP--DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F+ + +K P +T ++L+ + + + +EAE +K + G L + +N +++ +
Sbjct: 413 SLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGH 472
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
NG +D+ Q+L+E+ PD VT+N + + E A+K E+K+ I PD
Sbjct: 473 CVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDH 532
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
ISY+TL S Y K + A EM + Y++L+ Y+ +G D + ++
Sbjct: 533 ISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLRE 592
Query: 210 MMSLFAKMNDAEYTCVISSL 229
M S +D+ Y VI ++
Sbjct: 593 MQSKGITPDDSTYLYVIEAM 612
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 170/381 (44%), Gaps = 45/381 (11%)
Query: 31 RENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
R FE PDK+ T ++LL Y + ++ EA ++++M + G + YN +++ Y
Sbjct: 274 RAAGFE--PDKV----TLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSY 327
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEK-------------- 135
+ +G L++ Q+ +E++ K PDV+TY ++ + A
Sbjct: 328 VKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNL 387
Query: 136 ---------------------AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
F E++ PD ++++TL +++ + L + + KE
Sbjct: 388 CTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKE 447
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M+K R Y SL+S Y+ G D+ + I+K+M+ + + Y V+S+L + G
Sbjct: 448 MKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGR 507
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
+E+AE ++ E E++ D + LL AY N +L+ +S + + I+ +
Sbjct: 508 WEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKT 567
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN 354
L K + + F + R+ D ++ A + + G + E +L ++
Sbjct: 568 LVLVNSKVNNLSDTEKAFLEL--RRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKE 625
Query: 355 AG-HVSTEIYNSLLRTYAKAG 374
+ ++ST YNSL+ Y++ G
Sbjct: 626 SSINLSTATYNSLMHMYSRLG 646
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 7/336 (2%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQ 101
PD +AL+ + + + +A A+ +M G + YN +L++Y +V
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 102 MLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
++ ++K+ P D TYN ++ C + + A K F E++ +PD ++ ++L +Y
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K ++A LKEME+ C + V Y+SL+S Y G +E ++ ++M + +
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
YT ++S L + G+ + A Y+E + N L+ + R + ++ +
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEI 413
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
+ G P TW L + + G +V FK+ S +VP+ + + G
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKS--GYVPERDTYVSLISSYSRCG 471
Query: 341 DIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
D A + + AG H YN++L A+ G+
Sbjct: 472 LFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGR 507
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 38/307 (12%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL + QN E + ++M + G++ Y +++ Y G D+ ++
Sbjct: 420 PDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEI 479
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY-- 159
+ ++ PD+ TYN L+A A E AEK F E++ PD +SYS+L Y
Sbjct: 480 YKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYAN 539
Query: 160 -------------IKMELPEKAATTLK--------------------EMEKRTCRKNRVA 186
I E E +K E+ +R C +
Sbjct: 540 AKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINV 599
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
++++S+Y G +V I M ++ A Y ++ +LG+ EK ENI E +
Sbjct: 600 LNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIK 659
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S D N ++ AY + Q++ A ++ + G+ P T+ + Y+ E
Sbjct: 660 SSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFE 719
Query: 307 KVLECFK 313
+ ++ +
Sbjct: 720 EAIDLVR 726
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + + +AE L +M L Y+ +L+ Y + +LDK+ +
Sbjct: 490 PDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSL 549
Query: 103 LQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+++ ++ S + + L L N +T EKAFLEL++ + D + + S+Y
Sbjct: 550 SEDIYAERIESHNGLVKTLVLVNSKVNNLSDT-EKAFLELRRRRCSLDINVLNAMISIYG 608
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K + +K L M++ + + Y+SL+ +Y+ +G ++ I ++ S A+ +
Sbjct: 609 KNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRY 668
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +I + + G+ ++A ++ E + D NI + +Y+ + E A +
Sbjct: 669 SYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYM 728
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQM 305
VT G KP T+ + Y G++
Sbjct: 729 VTHGCKPNERTYNTILQEYCSHGRI 753
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 8/275 (2%)
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK-DEVL 204
DPD +Y+ L S + A + M V Y+ +L +Y+ + EVL
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVL 232
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+ M ++ Y +IS + +++A ++DE + D N LL Y
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVY 292
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
+ + A + G P T+ L Y+K G +E+ + ++ V+ P
Sbjct: 293 GKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEM--EVKGIEP 350
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKMP--LIIV 381
D T + L+ G ID A LRN + YN+L++ + GK P +I+
Sbjct: 351 DVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVF 410
Query: 382 ERMQKDNVQMDAET-QKVLKITSEMPV-SEVSSIF 414
+ ++ D T +L + + + +EVS +F
Sbjct: 411 DEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVF 445
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 15/333 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-----QLDKVPQML 103
SAL+ +Y ++ + EA ++E M G + YN +++ G L QML
Sbjct: 27 SALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQML 86
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q+ PD T+N LAAC+ E A F E+ D +Y+T K
Sbjct: 87 QD---GLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCG 143
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
E A + +ME + N V YS+L+ ++ + DE L++ +KM SL +++ Y
Sbjct: 144 NMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYN 203
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+++ VK G++++ + ++ E++ D N L+ Y + +L+M + +
Sbjct: 204 TLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 263
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+ P T+ L Y K G + S K D L ++ + L + G ++
Sbjct: 264 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLK--ADVVLFSSFIDTLAKNGLVE 321
Query: 344 GAEHLLVTLRNAG---HVSTEIYNSLLRTYAKA 373
A LL + G +V T YN+++ + K+
Sbjct: 322 CALSLLDEMIKMGIKPNVVT--YNTIIDAFGKS 352
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ + + +K EA L EKM G + YN +L +Y+ G+ D++ + +++
Sbjct: 166 TYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDM 225
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ D VTYN + Q + +++ + P ++YSTL +Y K +
Sbjct: 226 ENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMH 285
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A + ++ + + V +SS + G + L + +M+ + K N Y +
Sbjct: 286 GDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTI 345
Query: 226 ISSLVK 231
I + K
Sbjct: 346 IDAFGK 351
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 16/268 (5%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A +AF + ++S L S Y + L +A L+ M+ R V+Y+++
Sbjct: 5 DLARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAV 64
Query: 191 LSLYTNMGYKDE-VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
+ G L +++M+ + + ++++ + G E A ++DE +
Sbjct: 65 IDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLG 124
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D N + A +E+A + IKP T+ L G+ K +EK
Sbjct: 125 SGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSK---LEKYD 181
Query: 310 ECFK-----KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIY 363
E K K++G V + L+ A Y K G D + + N G T Y
Sbjct: 182 EALKLREKMKSLGIQLDRVCYNTLL-AIYVK---TGKYDEIATVCEDMENLGIEKDTVTY 237
Query: 364 NSLLRTYAKAGKMPLI--IVERMQKDNV 389
NSL+ Y K G++ ++ +V+ M+ V
Sbjct: 238 NSLINGYGKQGRLDMVAFLVQDMRAQGV 265
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 152/333 (45%), Gaps = 11/333 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQE 105
TC L+++Y + + +A L KM + G + YN +LN+Y G V +++
Sbjct: 197 TC--LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEA 254
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ + +PD+ TYN ++ C + E A F ++K PD ++Y+ L ++ K
Sbjct: 255 MRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRR 314
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
P++A L+EME V Y+SL+S Y G +E L + +M+ K + YT
Sbjct: 315 PQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTT 374
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S K G+ + A ++ E ++ + N L+ + NR + ++ +
Sbjct: 375 LLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCN 434
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
P TW L + + G +V FK K G V + + LI+ AY++ G
Sbjct: 435 CSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLIS-AYSRC---GSF 490
Query: 343 DGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAG 374
D A + ++ AG V YN++L A+ G
Sbjct: 491 DQAMAVYKSMLEAGVVPDLSTYNAVLAALARGG 523
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 160/373 (42%), Gaps = 45/373 (12%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T +ALL + ++++ EA ++++M GF + YN +++ Y G L++
Sbjct: 297 PDKV----TYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEE 352
Query: 99 VPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-------------- 143
+ Q + K PDV TY L+ + A + FLE++
Sbjct: 353 ALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIK 412
Query: 144 ---------------------KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
PD ++++TL +++ + + + + KEM++
Sbjct: 413 MHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVA 472
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
R +++L+S Y+ G D+ + ++K M+ + + Y V+++L + G +E++E +
Sbjct: 473 ERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVL 532
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E E + + LL AY N ++E +F + + ++ T LL L
Sbjct: 533 AEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVE---THAVLLKTLVLVN 589
Query: 303 GQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-ST 360
+ + ++E + + R+ + PD + A + + + A +L + S
Sbjct: 590 SKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSL 649
Query: 361 EIYNSLLRTYAKA 373
YNSL+ Y+++
Sbjct: 650 TTYNSLMYMYSRS 662
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 4/251 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWL 121
EA L ++M GF + YN +L+++ + + + ++LQE++ N SP VTYN +
Sbjct: 282 EAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLI 341
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+A A E A ++ I PD +Y+TL S + K + A EM C+
Sbjct: 342 SAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCK 401
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N +++L+ ++ N G E+++++ + + + +++ + G + I
Sbjct: 402 PNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGI 461
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ E + + N L++AY + A + Y ++ G+ P +T+ + +
Sbjct: 462 FKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALAR 521
Query: 302 KG---QMEKVL 309
G Q EKVL
Sbjct: 522 GGLWEQSEKVL 532
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L + PD T +A+L Y + + A+A ++ M E F YN ++ +
Sbjct: 599 ERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYM 658
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y + K ++L+E L+K PD ++YN + A + A + F E+K + + PD
Sbjct: 659 YSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPD 718
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++Y+T + Y + +A ++ M K+ C+ ++ Y+S++ Y + + E K
Sbjct: 719 VVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVK 778
Query: 209 KMMSLFAKMNDAEYTCVISSLVKL 232
+ +L ++ E + ++ + K+
Sbjct: 779 NLSNLDPHVSKEEESRLLERIAKM 802
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 11/287 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL + QN ++ + ++M GF+ +N +++ Y G D+ +
Sbjct: 437 PDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAV 496
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ L+ PD+ TYN LAA A E +EK E++ + P+ +SYS+L Y
Sbjct: 497 YKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYAN 556
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E+ +E+ + + V +L+ + + D ++ + + L + +
Sbjct: 557 GKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSK---SDLLIETERAFLELRRRGISPD 613
Query: 222 YTCVISSLVKLGE---FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
T + + L G KA I + T N L+ Y + +E
Sbjct: 614 ITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILR 673
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
++ KG+KP ++ + + Y + G+M++ F + S VPD
Sbjct: 674 EVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSA--LVPD 718
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 121/270 (44%), Gaps = 17/270 (6%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + ++E ++ +M + L Y+ +L+ Y + +++++
Sbjct: 507 PDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAF 566
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKET----AEKAFLELKKTKIDPDWISYSTLTSL 158
+E+ S V T+ + L N K E+AFLEL++ I PD + + + S+
Sbjct: 567 AEEI---YSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSI 623
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT---NMGYKDEVLR-IWKKMMSLF 214
Y + ++ KA L M + + Y+SL+ +Y+ N +E+LR + +K M
Sbjct: 624 YGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGM--- 680
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
K + Y VI + + G ++A I+ E + + D N +A Y + A
Sbjct: 681 -KPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAI 739
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
++ +G KP T+ + Y K Q
Sbjct: 740 DVVRYMIKQGCKPDQNTYNSIVDWYCKLDQ 769
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 77/174 (44%), Gaps = 5/174 (2%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ML++Y + K ++L + + +P + TYN + + + + +E+ E+ +
Sbjct: 618 NAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLE 677
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ PD ISY+T+ Y + ++A+ EM+ + V Y++ ++ Y E
Sbjct: 678 KGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAE 737
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
+ + + M+ K + Y ++ KL + +A + ++ DP V
Sbjct: 738 AIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNLSNL----DPHV 787
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 159/360 (44%), Gaps = 18/360 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A LH + SA A AL M C +N ML S G+ + ++L+++ +
Sbjct: 10 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 69
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEK 167
P+ VTYN +A S+ + A E++ + I P+ +Y T+ S + K+ ++
Sbjct: 70 ---PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 126
Query: 168 AATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A EM K + V Y++L+ Y + G D L +M+ M A Y ++
Sbjct: 127 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 186
Query: 227 SSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+L G +A Y+ E + G G D NIL+ + ++ A + + +
Sbjct: 187 HALFMDGRGTEA---YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 243
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDI 342
G++ T+ L + KKGQ+++ + F +A VR+ + PD L A N G+I
Sbjct: 244 GVRATVVTYTSLIYALSKKGQVQETDKLFDEA---VRRGIRPDLVLYNALINSHSTSGNI 300
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
D A ++ + ++ YN+L+R G++ +++ M K +Q D T L
Sbjct: 301 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTL 360
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 1/257 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+AL+ Y K A ++M E G YN +++ +G+ + ++++E+
Sbjct: 148 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 207
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K +PDV TYN+ + + + + A + F + + + ++Y++L K ++
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
E +R R + V Y++L++ ++ G D I +M +D Y ++
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 327
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L LG ++A + DE D N L++ Y + ++ A N ++ KG P
Sbjct: 328 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387
Query: 288 CYTTWELLTWGYLKKGQ 304
T+ L G K GQ
Sbjct: 388 TLLTYNALIQGLCKNGQ 404
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H+ + + EA L+E+M G YN ++N + G + K ++ + +
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 240
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ VVTY + A + + + +K F E + I PD + Y+ L + +
Sbjct: 241 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 300
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + EMEK+ + V Y++L+ +G DE ++ +M + + Y +
Sbjct: 301 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTL 360
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS G+ + A I +E + N L+ Q + AE+ +V GI
Sbjct: 361 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 420
Query: 286 KPCYTTWELLTWG 298
P +T+ L G
Sbjct: 421 TPDDSTYISLIEG 433
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+++ + + E + L ++ G + YN ++N + ++G +D+ +++ E+
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK +PD VTYN + + A K E+ K I PD ++Y+TL S Y
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 370
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + + Y++L+ G D+ + K+M+ +D+ Y +
Sbjct: 371 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 430
Query: 226 ISSL 229
I L
Sbjct: 431 IEGL 434
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 137/316 (43%), Gaps = 19/316 (6%)
Query: 84 NHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
N M+ LY I+ G++ V +++ K+N P TY L + ND E E+K
Sbjct: 284 NQMILLYKRIAPGKVASVLMLME--KENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMK 341
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR--TCRKNRVAYSSLLSLYTNMGY 199
I+P + + + YI L EKA +KEME + + R SLL LY +
Sbjct: 342 AYGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNK 401
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
++V RIW+ M + D + I + +LG EKAE ++ + + N
Sbjct: 402 PNDVARIWE--MCTEPMLED--FLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNA 457
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+L Y L + F R+ G TW+ L Y+ G++EK + +V
Sbjct: 458 MLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKA----DSFLLNV 513
Query: 320 RKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ PD + + +Y L ++GDI E + L+N G+ + Y LL Y A
Sbjct: 514 AEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAK 573
Query: 375 KMPLIIVERMQKDNVQ 390
+ERM+ DNV+
Sbjct: 574 VPAHGFLERMRGDNVR 589
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 25 ALQTRARENF--FENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
L +A E F N P+K+ +A+L+ Y QNK ++ + +E+M G PL
Sbjct: 431 GLIEKAEETFEAMANAPEKLSS-KYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLT 489
Query: 83 YNHMLNLYISNGQLDKVPQML---QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
++ ++NLY+++G+++K L E + P +Y + A + D EK F
Sbjct: 490 WDALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDR 549
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
LK P + Y+ L Y+ ++P A L+ M R + +SL +L
Sbjct: 550 LKNVGYAPRPLHYAVLLEAYVNAKVP--AHGFLERMRGDNVRPTKKIVTSLDTL 601
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 165/395 (41%), Gaps = 40/395 (10%)
Query: 46 DTCSALLHSYV-------QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
+ C+ +H+Y +NKK EA ALMEK++ G YN +LN G+L++
Sbjct: 28 NGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 87
Query: 99 VPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+L+++ N +PDVVTY + + A K F E+ + D + Y+ L
Sbjct: 88 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIR 147
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++ +A++ K M + C + V S+++ G +RI+K M +
Sbjct: 148 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
N+ Y+ +I L K + + A + + + T D NIL+ + A +F+
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK-----------AIGSVRKWVPDH 326
+ ++ G KP T+ +L G+ K G + F G++ +
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR 327
Query: 327 RLITAA---YNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIV 381
R +T A Y ++E+G + +Y+SL+ K+GK+ ++
Sbjct: 328 RQLTKASLYYQHMKERG---------------CPPDSFVYSSLVDGLCKSGKLEGGCMLF 372
Query: 382 ERMQKDNV-QMDAETQKVLKITSEMPVSEVSSIFS 415
+ M++ V T+ + + V E S+F+
Sbjct: 373 DEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFN 407
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 138/350 (39%), Gaps = 12/350 (3%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ + D PD T ++L+ + K+S EA L ++M+ G + Y ++
Sbjct: 90 DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149
Query: 91 ISNGQLDKVPQMLQELKKNTS----PDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ G K+PQ K TS PDVVT + + A + F ++ +
Sbjct: 150 LQAG---KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA 206
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ + YS L K + A L +M+K C + + Y+ L+ G
Sbjct: 207 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAF 266
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ +M+ K + Y +IS K G + A ++D+ S + + L++
Sbjct: 267 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCK 326
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
R QL A +Y + +G P + L G K G++E F + R V +
Sbjct: 327 RRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM---ERSGVANS 383
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ T L + +D A L +R G YNS++ K+GK+
Sbjct: 384 QTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKV 433
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 34/230 (14%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
SAL+H + +K A ++ +M + + YN +++ +G + E L+
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PDV TYN+ ++ + + A F ++ ++ P+ ++Y TL S K K
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----------------- 210
A+ + M++R C + YSSL+ G + ++ +M
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 392
Query: 211 ----------MSLFAKM------NDAEYTCVISSLVKLGEFEKAENIYDE 244
+SLF + + Y +IS+L+K G+ + + +Y E
Sbjct: 393 LCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQE 442
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 152/370 (41%), Gaps = 46/370 (12%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
C+ +LH+Y + K A + EKM E G + YN ML++Y G++ + M+ EL
Sbjct: 240 CTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVY---GKMGRAWSMILELL 296
Query: 107 ----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
K D T ++AC + + A + F +LK P +Y+++ ++ K
Sbjct: 297 DEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKA 356
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ +A LKEME C + + Y+ L++ Y G+ DE + M S N Y
Sbjct: 357 GVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITY 416
Query: 223 TCVISSLVKLGEFEKAENIYDEWES----------------------------------I 248
T VI++ K G+ +KA ++ + + +
Sbjct: 417 TTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKL 476
Query: 249 SGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+G R+ N +LA + + + + G +P T+ L Y + G
Sbjct: 477 NGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVD 536
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSL 366
V + + + + + + P A N L +G+ AE +++ +R G E Y+ L
Sbjct: 537 VAKMYGEMVAA--GFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLL 594
Query: 367 LRTYAKAGKM 376
L Y+KAG +
Sbjct: 595 LHCYSKAGNV 604
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 152/351 (43%), Gaps = 14/351 (3%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF++L P T + ++L + + EA ++++M + + YN ++ Y+
Sbjct: 330 FFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYV 389
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G D+ ++ + K P+ +TY + A D + A + F ++K+ P+
Sbjct: 390 RAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVC 449
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + L K E L +M+ C +R+ ++++L++ G + V ++ ++M
Sbjct: 450 TYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREM 509
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + + + +IS+ + G +Y E + T N LL A R
Sbjct: 510 KNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNW 569
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEKV-LECFKKAIGSVRKWVPDH 326
+ AES + KG KP T++ LL Y K G +EKV +E + + W+
Sbjct: 570 KAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHV--FPSWMLLR 627
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKM 376
L+ Y + + G E L+N G+ + + NS+L + + K+
Sbjct: 628 TLVLTNYKCRQ----LKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKL 674
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ML++++ N +L+K +ML + P++VTYN + A D AE+ +++
Sbjct: 662 NSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQN 721
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ I PD +SY+T+ + K L ++A L EM + + +++ +S Y G E
Sbjct: 722 SGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAE 781
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
+ + M+ N+ Y VI +K + ++A + + + I + D
Sbjct: 782 ADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISFD 832
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP-EKAA 169
S DV L A A + A + F ++K+T +DP ++Y+ + +Y KM
Sbjct: 234 SLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMIL 293
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L EM + + ++++S G DE R + + K A Y ++
Sbjct: 294 ELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVF 353
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + +A NI E E + D N L+AAY+ + + + + +KG+ P
Sbjct: 354 GKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNA 413
Query: 290 TTWELLTWGYLKKGQMEKVLECFK--KAIGSV 319
T+ + Y K G +K LE F K +G V
Sbjct: 414 ITYTTVINAYGKAGDADKALEVFGQMKELGCV 445
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 27 QTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
Q + E F L + D +++L +V+N+K +A +++ + G + YN
Sbjct: 638 QLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYN 697
Query: 85 HMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+++LY G K +ML++++ + SPDVV+YN + + + A + E+
Sbjct: 698 SLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTAN 757
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ P I+++T S Y L +A ++ M + C N + Y ++ Y E
Sbjct: 758 GVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEA 817
Query: 204 LRIWKKMMSLFAKMNDAEY----TCVISSL 229
+ K+ + +D +C+ SL
Sbjct: 818 MDFVSKIKEIDISFDDQSLKKLASCIRESL 847
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 23/299 (7%)
Query: 26 LQTRAR-ENFFENLPD-KMRG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
L R+R E+ + L D K+ G PD T + +L + K ++ +M CGF
Sbjct: 458 LGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPD 517
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+N +++ Y G V +M E+ +P + TYN L A A + + + AE L
Sbjct: 518 KETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVL 577
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+++K P+ SYS L Y K L+++E + LL
Sbjct: 578 DMRKKGFKPNETSYSLLLHCYSK----AGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTN 633
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEY-------TCVISSLVKLGEFEKAENIYDEWESISGT 251
YK R K M F ++ + Y ++S V+ + EKA + D +SG
Sbjct: 634 YK---CRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIH-VSGL 689
Query: 252 GDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
V N L+ Y AE + GI P ++ + G+ KKG +++ +
Sbjct: 690 QPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAI 748
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 160/395 (40%), Gaps = 46/395 (11%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
+++ QN +S EA L+E+M G Y ++ + G + + L+++ K N
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD+ YN + ++ E AE+ + +++K + PD +YS L Y K EKA
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKAD 578
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS----------------- 212
L++M + N Y+ LL Y ++V I + M+
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638
Query: 213 --------LFAKMNDAE----------YTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
F + + E Y+ +IS L K+ + EKA + DE
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGI 698
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N L+ + + A + ++ ++ KG+ P T+ L G K G + + +K+
Sbjct: 699 VCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKE 758
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+ R PD + + D++ A L + N G+ + ++N+L+ + K G
Sbjct: 759 MLD--RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRG 816
Query: 375 KMPLIIVERMQKDNVQMDAE----TQKVLKITSEM 405
K+ E + +V MD E Q V K+ SE
Sbjct: 817 KLQ----ETEKLLHVMMDREIVPNAQTVEKVVSEF 847
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 146/366 (39%), Gaps = 18/366 (4%)
Query: 24 QALQTRAR----ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+ L T R E ++ + + PD T S L+H Y + +A+ L+ +M G
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKA 136
Y +L Y + +KV +LQ L PD Y + + + + E A
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E++K + PD YS+L S K+ EKA L EM K V Y++L+ +
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 710
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G ++ +++ N YT +I K G+ A ++Y E D V
Sbjct: 711 SGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFV 770
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM---EKVLECFK 313
N+L + LE A + +G + + L G+ K+G++ EK+L
Sbjct: 771 YNVLATGCSDAADLEQALFLTEEMFNRGYAN-VSLFNTLVHGFCKRGKLQETEKLLHVMM 829
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL--RNAGHVSTEIYNSLLRTYA 371
R+ VP+ + + ++ + G + A + L + A +T+ ++ L
Sbjct: 830 D-----REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMI 884
Query: 372 KAGKMP 377
G +P
Sbjct: 885 NKGLIP 890
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 12/335 (3%)
Query: 48 CSALLHSYVQNKKSAEAEALMEK----MSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
C+ LL ++ A+A L+ K M G L Y+ + + D ++
Sbjct: 211 CNGLLKDLLR----ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVF 266
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+E+++ + + + VTYN+ ++ E A E+ + PD +Y L + K
Sbjct: 267 EEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKG 326
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++A L EM + N V Y +L+ + G E I K+M+S + N Y
Sbjct: 327 SRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMY 386
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I L K+G+ +A + E + D N L+ + ++ + A N +
Sbjct: 387 DNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRN 446
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
GI P ++ ++ G + G+ ++ ++ I K P+ + ++G+I
Sbjct: 447 SGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLK--PNAFMYAPLIIGHSKEGNI 504
Query: 343 DGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
A L + A H YNSL++ + G+M
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRM 539
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 5/270 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + +H QN + A +M+ M + G YN ++N NG+LD+
Sbjct: 300 PDQV----TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDE 355
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ Q + + PD T+N + A +SQN E A EL + PD +++ L +
Sbjct: 356 AKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILIN 415
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K+ P +EM+ C + V Y+ L+ +MG L + +M S
Sbjct: 416 ALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPR 475
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I +L K E+AE ++D+ ++ + N L+ +++ A
Sbjct: 476 STVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELI 535
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
++V +G++P T+ + Y K+G ++K
Sbjct: 536 EQMVKEGLQPNNITYNSILTHYCKQGNIKK 565
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+NH+LN+ + +L + + E+ + PDVVT N + A + TA E+
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 224
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +++TL +I+ E A +M + C V + L++ Y MG +
Sbjct: 225 SHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVE 284
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L ++ ++ + + Y + L + G A + D D N ++
Sbjct: 285 DALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 344
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+L+ A+ N++V +G P TT+ L + ++E+ L+ ++ +V+
Sbjct: 345 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL--TVKG 402
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD N L + GD L ++++G E+ YN L+ GK+
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 47/279 (16%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACA 125
L E+M G + YN +++ S G+L +L E++ N P VTYN + A
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488
Query: 126 SQNDKETAEKAFLEL--------------------KKTKID---------------PDWI 150
+ E AE+ F ++ K +ID P+ I
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+++ + Y K +KAA L+ M + V Y +L++ G L++ + M
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN-- 268
+ Y VI SL + A N++ E + G+P P+ L + R+
Sbjct: 609 RIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV---GEP--PDALTYKIVFRSLC 663
Query: 269 ----QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++ A F +V KG P ++++ +L G L G
Sbjct: 664 RGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 112/276 (40%), Gaps = 9/276 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + L+ + + EA L +++ G +N ++N G ++
Sbjct: 370 PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 429
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+K + +PD VTYN+ + S A E++ ++Y+T+ K
Sbjct: 430 FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCK 489
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+A +M+ + ++ V +++L+ D+ + ++M+ + N+
Sbjct: 490 KMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNIT 549
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYN 278
Y +++ K G +KA +I E+++ G D L+ + ++A
Sbjct: 550 YNSILTHYCKQGNIKKAADI---LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLR 606
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ KGI+P + + ++ + L F++
Sbjct: 607 GMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFRE 642
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 150/332 (45%), Gaps = 9/332 (2%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQEL 106
LL + + K++ EA + L+ + E G + Y+ +L +GQ D + +M+ E
Sbjct: 165 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 224
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SP+VV YN + + D A F E+ + I PD ++Y+++ K +
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 284
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA L++M + N Y++L+ Y++ G E +R++K+M + + ++
Sbjct: 285 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
SL K G+ ++A +++D D NI+L Y + L ++ ++ GI
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 404
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + T+ +L Y G ++K + F + V+ V +R + AA ++ G +D A
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI---GKMDDA 461
Query: 346 EHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
+ + G + YN L++ + G +
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 493
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 5/280 (1%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T S L+ S + K EA + + M+ G YN MLN Y + G L
Sbjct: 334 LPDVV----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 389
Query: 98 KVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ + L +PD T+N+ + A A+ + A F E++ + PD ++Y T+
Sbjct: 390 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 449
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ ++ + A +M + ++ AY+ L+ + G + + ++M+
Sbjct: 450 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ ++ +I++L KLG A+NI+D ++ D V ++L+ Y ++E A
Sbjct: 510 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ +V+ GI+P + L GY K G++++ L F++ +
Sbjct: 570 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 609
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 120/292 (41%), Gaps = 4/292 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ + ++G L K +++ E+ N D+V ++ + A+ F
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 539
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD + YS L Y + EKA M N V Y +L++ Y +G D
Sbjct: 540 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 599
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E L ++++M+ K + Y+ +I L + G A+ + E D NI+L
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ A + L +K T + G + ++E+ + F S +
Sbjct: 660 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI--SRSR 717
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
VP+ + L ++G ++ AE + +++NAG ++ + N ++R K
Sbjct: 718 LVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 28/360 (7%)
Query: 45 PDTCS------ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
P++CS LL + V +AE + KM + N +L LY N +
Sbjct: 208 PESCSREIMYRTLLANCVSQNNVKKAEEVFSKMKDLDLPITVFTCNELLFLYKRNDKKKI 267
Query: 99 VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+L + P +Y++ + D ++ +K I+PD + + L
Sbjct: 268 ADLLLLMENEKIKPSRHSYSILIDTKGQSKDIGGMDQIVDRMKAQGIEPDINTQAVLARH 327
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
YI L +K T LK+ME ++NR LL LY N+G DEV RIWK + N
Sbjct: 328 YISAGLQDKVETLLKQMEGENLKQNRWLCRILLPLYANLGKVDEVGRIWK-----VCETN 382
Query: 219 DAEYTCV--ISSLVKLGEFEKAENIYD----EWESISGTGDPRVPNILLAAYINRNQLEM 272
C+ I + KL + ++AE +++ +W+ S T +ILL Y N L
Sbjct: 383 PRYDECLGAIEAWGKLNKIDEAEKVFEMMVKKWKLSSKT-----CSILLKVYANNEMLMK 437
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLIT 330
+ R+ G + TW+ + Y++ G++EK +KA ++ + I
Sbjct: 438 GKDLMKRIGDGGCRIGPLTWDTIVKLYVQTGEVEKADSVLQKAAQQSQMKPMFSTYLTIL 497
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQKDNV 389
Y K +GDI +E + + ++ A + S ++Y L+ Y A I +R++ D++
Sbjct: 498 EQYAK---RGDIHNSEKIFLRMKQADYTSKAKMYQVLMNAYINAKVPAYGIRDRLKADSI 554
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 159/384 (41%), Gaps = 8/384 (2%)
Query: 22 QAQALQTRARENFFENLPDKMRGP--DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
QA + R N F+ + P +T ++LL Y + EA L +M GF
Sbjct: 411 HCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPN 470
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFL 138
+ Y ++ YI+ D +L E+K+N S + TYN+ + + +
Sbjct: 471 VVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLK 530
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
P ++Y+++ + ++K + A T ++M ++ N + Y+S + Y G
Sbjct: 531 SFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTG 590
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
D L++ + + + Y +I+ + G A + + V N
Sbjct: 591 CSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYN 650
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
L+ Y N N ++ FY ++ GI +T+ L G+ K G + LE + + +
Sbjct: 651 SLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMA- 709
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM- 376
+ ++PD TA + L GDIDGA+ LL +R + IYN L+ Y + K+
Sbjct: 710 -KGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768
Query: 377 -PLIIVERMQKDNVQMDAETQKVL 399
+ + M +Q D T +L
Sbjct: 769 EAFRLHDEMLNMGIQPDDTTYDIL 792
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 124/318 (38%), Gaps = 18/318 (5%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + PD+ + L A + + A F+E++ D + L S +K +
Sbjct: 149 VARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMH 208
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A EM ++ Y+ ++ +G LR+ ++M + D Y +
Sbjct: 209 EDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTM 268
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ LVK G E+A + DE D V L+ Y R ++ A + + + GI
Sbjct: 269 VDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGI 328
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + +L G + G +K E ++ G + +P ++ L A
Sbjct: 329 VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTG--QGLLPSTFELSLVLKGLLNDRRWKDA 386
Query: 346 EHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET-------- 395
L + ++G YN+L+ + +A K+ L + +RM+K V+ T
Sbjct: 387 VCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGY 446
Query: 396 ------QKVLKITSEMPV 407
+ +K+ SEMP+
Sbjct: 447 CKKGCMDEAVKLYSEMPM 464
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 122/322 (37%), Gaps = 39/322 (12%)
Query: 116 TYNLWLAACASQNDK--ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
T+ L L ND+ + A F E+ + + PD +Y+ L + + +A
Sbjct: 367 TFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFD 425
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
M+K + + Y+SLL Y G DE ++++ +M K N Y ++ +
Sbjct: 426 RMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKK 485
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+F+ A + DE + + + N+L+ +++ + +++G P T+
Sbjct: 486 DFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYN 545
Query: 294 LLTWGYLKKGQMEKVLECFK-------------------------------KAIGSVRK- 321
+ G++K G M ++ K + VR+
Sbjct: 546 SIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRR 605
Query: 322 -WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI 379
PD A N ++G++ A LLV L G +T +YNSL+ Y M +
Sbjct: 606 GLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEV 665
Query: 380 --IVERMQKDNVQMDAETQKVL 399
E M K + D T L
Sbjct: 666 SKFYESMIKGGIVADTSTYTTL 687
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 101/251 (40%), Gaps = 36/251 (14%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ-E 105
T ++ + Y + S A ++ + G + YN ++N + G + Q+L
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVIL 637
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
LK +P+ V YN + + N + K + + K I D +Y+TL + K
Sbjct: 638 LKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSK---- 693
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
VA++ L LY+ M K + + +T +
Sbjct: 694 ----------------DGNVAFA--LELYSEMMAKGYIPDAFT-------------FTAL 722
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
L + G+ + A+ + +E + + + N+L+ Y+ +L+ A ++ ++ GI
Sbjct: 723 THGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGI 782
Query: 286 KPCYTTWELLT 296
+P TT+++L
Sbjct: 783 QPDDTTYDILV 793
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 137/316 (43%), Gaps = 19/316 (6%)
Query: 84 NHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
N M+ LY I+ G++ V +++ K+N P TY L + ND E E+K
Sbjct: 284 NQMILLYKRIAPGKVASVLMLME--KENVKPSAFTYRLLIDLKGRSNDLAGIEVVINEMK 341
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR--TCRKNRVAYSSLLSLYTNMGY 199
I+P + + + YI L EKA +KEME + + R SLL LY +
Sbjct: 342 AYGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNK 401
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
++V RIW+ M + D + I + +LG EKAE ++ + + N
Sbjct: 402 PNDVARIWE--MCTEPMLED--FLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNA 457
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+L Y L + F R+ G TW+ L Y+ G++EK + +V
Sbjct: 458 MLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKA----DSFLLNV 513
Query: 320 RKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ PD + + +Y L ++GDI E + L+N G+ + Y LL Y A
Sbjct: 514 AEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAK 573
Query: 375 KMPLIIVERMQKDNVQ 390
+ERM+ DNV+
Sbjct: 574 VPAHGFLERMRGDNVR 589
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 25 ALQTRARENF--FENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
L +A E F N P+K+ +A+L+ Y QNK ++ + +E+M G PL
Sbjct: 431 GLIEKAEETFEAMANAPEKLSS-KYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLT 489
Query: 83 YNHMLNLYISNGQLDKVPQML---QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
++ ++NLY+++G+++K L E + P +Y + A + D EK F
Sbjct: 490 WDALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDR 549
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
LK P + Y+ L Y+ ++P A L+ M R + +SL +L
Sbjct: 550 LKNVGYAPRPLHYAVLLEAYVNAKVP--AHGFLERMRGDNVRPTKKIVTSLDTL 601
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 11/317 (3%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLD---KVPQMLQELKKNTSPDVVTYNLWLA 122
++E M G + YN +++ G +D + Q LK PD T+N LA
Sbjct: 2 GVLESMKGAGLRPTTVSYNAVIDA-CGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLA 60
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
AC+ E A F E+ I D +Y+T K E A L +ME + +
Sbjct: 61 ACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKP 120
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N V YS+L+ Y+ + +E L++ +KM S+ +++ Y +++ VK G++ + N+
Sbjct: 121 NVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVC 180
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
DE E + D N L+ Y + +L++ + +G+ P T+ L Y K
Sbjct: 181 DEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKA 240
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG---HVS 359
G + S K PD L ++ + L + G I+ A LL + G +V
Sbjct: 241 GMHGDAFNVYLDFKESGLK--PDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVV 298
Query: 360 TEIYNSLLRTYAKAGKM 376
T YN+++ + K+ M
Sbjct: 299 T--YNAIIDAFGKSKVM 313
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+ LL YV+ K AE + ++M E G K + YN ++N Y G+LD V ++Q++ K
Sbjct: 161 NTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRK 220
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +P V+TY+ + + A +L+ K++ + PD + +S+ K L E
Sbjct: 221 RGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEW 280
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLY 194
A + L +M + + N V Y++++ +
Sbjct: 281 ALSLLNDMTEMGIKPNVVTYNAIIDAF 307
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ Y + +K EA L EKM + YN +L +Y+ G+ ++ + E+
Sbjct: 124 TYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEM 183
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ D VTYN + Q + +++K + P ++YSTL +Y K +
Sbjct: 184 EELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMH 243
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A + ++ + + V +SS + G + L + M + K N Y +
Sbjct: 244 GDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAI 303
Query: 226 ISSLVK 231
I + K
Sbjct: 304 IDAFGK 309
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE-VLRIWKKMMSLFAKMNDAEYTCVISSL 229
L+ M+ R V+Y++++ G L +++M+ + + ++++
Sbjct: 3 VLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAAC 62
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
++G E A ++DE + D N + A +E+A + KG+KP
Sbjct: 63 SRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNV 122
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD--HRLITAAYNKLEEQGDI----D 343
T+ L GY K + E+ L+ +K + S+R + + + A Y K + +I D
Sbjct: 123 VTYSTLIDGYSKLEKYEEALKLCEK-MKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCD 181
Query: 344 GAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL--IIVERMQKDNV 389
E L + T YNSL+ Y K G++ + I+V+ M+K V
Sbjct: 182 EMEELGI------EKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGV 223
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 158/353 (44%), Gaps = 10/353 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV A + N FE PD++ T + ++ QN A +M+ M + G
Sbjct: 270 RVEDALGYIQQEIANGFE--PDQI----TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323
Query: 79 CPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
YN ++N NGQL++ +L Q +++ PD+ T+N + A S N E A
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++ + PD +++ L + K+ P+ A +EM+ C + V Y++L+ ++
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G + L + K+M S + Y +I L K E+AE ++D+ + + +
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 503
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L+ +++ A ++++++G++P T+ + Y K+G ++K + +
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM-- 561
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRT 369
+ + D N L + G A LL +R G +T + YN ++++
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQS 614
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 134/297 (45%), Gaps = 6/297 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YNH+LN+ + ++ + + E+ ++ PDVVT+N + A + TA E+
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLK-EMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ + PD +++TL +++ E KAA +K M + C +V + L++ Y +G
Sbjct: 213 SSGVAPDETTFTTLMQGFVE-EGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ L ++ ++ + + Y ++ L + G A + D D NI+
Sbjct: 272 EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ QLE A+ N++V +G P TT+ L ++E+ L+ ++ +++
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQV--TLK 389
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD N L + GD A L ++++G E+ YN+L+ GK+
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKL 446
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 157/367 (42%), Gaps = 14/367 (3%)
Query: 14 QSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSE 73
Q + + + AL+ +AR P K+ T + L++ Y + + +A +++
Sbjct: 228 QGFVEEGSIKAALRVKARMLEMGCSPTKV----TVNVLINGYCKLGRVEDALGYIQQEIA 283
Query: 74 CGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKET 132
GF + YN +N NG + +++ + ++ PDV TYN+ + E
Sbjct: 284 NGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 343
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A+ ++ + PD +++TL E+A +++ + + ++ L++
Sbjct: 344 AKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILIN 403
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+G LR++++M S ++ Y +I +L LG+ KA ++ E ES G
Sbjct: 404 ALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMES---AG 460
Query: 253 DPRVP---NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
PR N ++ + ++E AE ++++ +GI T+ L G K +++
Sbjct: 461 CPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDAN 520
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLR 368
+ + I P++ + +QGDI A +L T+ N V Y +L+
Sbjct: 521 QLISQMISE--GLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLIN 578
Query: 369 TYAKAGK 375
KAG+
Sbjct: 579 GLCKAGR 585
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + PD T + L+ + K +A L+++M G + + YN +++
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++++ ++ ++ + S + +T+N + + A + ++ + P+ I
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+++ + Y K +KAA L+ M + V Y +L++ G L++ + M
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI-NRNQ 269
+ Y VI SL + A N++ E + D I+
Sbjct: 597 RIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGS 656
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ A F +V KG P ++++ +L G L G
Sbjct: 657 IREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 8/273 (2%)
Query: 48 CSALLHSYV-------QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
C+ +H+Y +NKK EA ALMEK++ G YN +LN G+L++
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 322
Query: 101 QMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
+L+++ N +PDVVTY + + A K F E+ + D + Y+ L
Sbjct: 323 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIREL 382
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
++ +A++ K M C + V S+++ + G +RI+K M + N+
Sbjct: 383 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 442
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y+ +I L K + + A + + + T D NIL+ +E A +F++
Sbjct: 443 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 502
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
++ G KP T+ +L G+ K G + F
Sbjct: 503 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVF 535
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 3/319 (0%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYN 118
K EA ALMEK++ G YN +LN G+L++ +L+++ N +PDVVTY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + A K F E+ + D + Y+ L ++ +A++ K M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C + V S+++ + G +RI+K M + N+ Y+ +I L K + + A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ + + T D N+L+ +E A +F++ ++ G KP T+ +L G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV 358
+ K G + + ++ D TA + L + I+ A L+ + G
Sbjct: 241 FCKAGNTDAASHSLAQET-TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299
Query: 359 ST-EIYNSLLRTYAKAGKM 376
T YN+LL K G++
Sbjct: 300 PTIATYNALLNGLCKMGRL 318
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 133/331 (40%), Gaps = 5/331 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
SAL+H + +K A ++ +M + + YN +++ +G ++ E L+
Sbjct: 165 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLE 224
Query: 108 KNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PDV TYN+ ++ C + N + E D +Y+ + K + E
Sbjct: 225 AGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIE 284
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A ++++ C Y++LL+ MG +E + + +K++ + YT +I
Sbjct: 285 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 344
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K +A ++ E D L+ + ++ A S Y + + G
Sbjct: 345 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 404
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T + G K G++ + FK R P+ + +A + L + +D A
Sbjct: 405 PDVVTLSTMIDGLSKAGRIGAAVRIFKSM--EARGLAPNEVVYSALIHGLCKARKMDCAL 462
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+L ++ A I YN L+ K+G +
Sbjct: 463 EMLAQMKKAFCTPDTITYNILIDGLCKSGDV 493
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 9/258 (3%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ + D PD T ++L+ + K+S EA L ++M+ G + Y ++
Sbjct: 323 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIREL 382
Query: 91 ISNGQLDKVPQMLQELKKNTS----PDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ G K+PQ K TS PDVVT + + + A + F ++ +
Sbjct: 383 LQTG---KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ + YS L K + A L +M+K C + + Y+ L+ G +
Sbjct: 440 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 499
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ +M+ K + Y +IS K G + A ++D+ S + + L++
Sbjct: 500 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559
Query: 267 RNQLEMAESFYNRLVTKG 284
R QL A ++ + +G
Sbjct: 560 RRQLTKASLYFQHMKERG 577
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 11/388 (2%)
Query: 34 FFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F EN+ PD C+ L+ + + K+ +A ++E + G + + YN M++ Y
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+++ +L + + SPDVVTYN L + + A + + + PD I+
Sbjct: 184 KAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L + A L EM R C + V Y+ L++ G DE ++ M
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
S + N + ++ S+ G + AE + + + NIL+ + L
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A ++ G +P ++ L G+ K+ +M++ +E ++ + R PD
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS--RGCYPDIVTYNT 419
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDN 388
L + G ++ A +L L + G I YN+++ AKAGK + +++ M+ +
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 389 VQMDAETQKVL--KITSEMPVSEVSSIF 414
++ D T L ++ E V E F
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 122/280 (43%), Gaps = 3/280 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F ++P P+ T + +L S + +AE L+ M GF + +N ++N
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G L + +L+++ + P+ ++YN L + + A + + PD +
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+T+ + K E A L ++ + C + Y++++ G + +++ +M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K + Y+ ++ L + G+ ++A + E+E + + N ++ Q
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ A F ++ +G KP T++ +L G +G ++ LE
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ E +P P++ S LLH + + KK A +E+M G + YN ML
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+G+++ ++L +L K SP ++TYN + A A K E++ + PD
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+YS+L + ++A E E+ R N V ++S++ D +
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
M++ K N+ YT +I L G ++A + +E
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQ--AQALQTRARENFFENLPDKMRGPD--TCSALLHSYV 56
+E+ HG Q + SY + + RA E + E + + PD T + +L +
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE-YLERMVSRGCYPDIVTYNTMLTALC 425
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVV 115
++ K +A ++ ++S G + YN +++ G+ K ++L E++ K+ PD +
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY+ + + + + A K F E ++ I P+ ++++++ K ++A L M
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
R C+ N +Y+ L+ G E L + ++
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + ++ QN A +M+ M + G YN ++N NGQL++
Sbjct: 284 PDQI----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+L Q + + PD+ T+N +AA + N E A ++ + PD +++ L +
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K+ P A +EM+ C + V Y++L+ ++G + L + K M S
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I L K E+AE ++D+ + + + N L+ +++ A
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
N+++++G++P T+ + Y K+G ++K
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YNH+LN+ + ++ + + E+ + PDVVT+N + A + TA E+
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 208
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +++TL +++ E A M + C +V + L++ Y +G +
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L ++ ++ + + Y ++ L + A + D D NI++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
QLE A+ N++V +G P TT+ L ++E+ L+ ++ +V+
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV--TVKG 386
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD N L + GD A L ++N+G E+ YN+L+ GK+
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 159/397 (40%), Gaps = 47/397 (11%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A Q R E + + PD T + L+ +V+ A + +M E G
Sbjct: 190 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249
Query: 79 CPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ N ++N Y G++ D + + QE+ PD +TYN ++ + A K
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS----- 192
+ + DPD +Y+ + + K E+A L +M R C + +++L++
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 193 ---------------------LYT---------NMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+YT +G LR++++M + ++ Y
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP---NILLAAYINRNQLEMAESFYNR 279
+I +L LG+ KA ++ + ES TG PR N ++ + ++E AE +++
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMES---TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +GI T+ L G K +++ + I P++ + +Q
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE--GLQPNNITYNSILTHYCKQ 544
Query: 340 GDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGK 375
GDI A +L T+ N V Y +L+ KAG+
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 117/279 (41%), Gaps = 14/279 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + PD T + L+ + K +A L++ M G + + YN +++
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++++ ++ ++ + S + +T+N + + A ++ + P+ I
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNI 532
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+++ + Y K +KAA L+ M + V Y +L++ G L++ + M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR--- 267
+ Y V+ SL + A +++ E + G+P P+ L + R
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV---GEP--PDALTYKIVFRGLC 647
Query: 268 ---NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++ A F +V KG P ++++ +L G L G
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 153/346 (44%), Gaps = 9/346 (2%)
Query: 35 FENLPDK--MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ +P + R + +AL+++Y +N + + L+++M L YN ++N +
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CA 222
Query: 93 NGQLD--KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G LD + + E++ + PD+VTYN L+ACA + + AE F + I PD
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YS L + K+ EK L EM + +Y+ LL Y G E + ++ +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + N Y+ +++ + G ++ ++ E +S + D NIL+ +
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ + ++ +V + I+P T+E + + K G E + + + VP +
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM--TANDIVPSSKAY 460
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
T + + A T+ G + S E ++SLL ++A+ G
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 506
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 128/303 (42%), Gaps = 5/303 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + D PD T S L+ ++ + ++ + L+ +M+ G L YN +L
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y +G + + + +++ +P+ TY++ L + + FLE+K + DPD
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ L ++ + ++ T +M + + Y ++ G ++ +I +
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M + + YT VI + + +E+A ++ + + LL ++
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 506
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
++ +E+ +RLV GI T+ Y + G+ E+ ++ + S + PD R
Sbjct: 507 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS--RCDPDERT 564
Query: 329 ITA 331
+ A
Sbjct: 565 LEA 567
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 92/258 (35%), Gaps = 38/258 (14%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S LL +Y ++ EA + +M G Y+ +LNL+ +G+ D V Q+
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 103 LQELK------------------------------------KNTSPDVVTYNLWLAACAS 126
E+K +N PD+ TY + AC
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E A K + I P +Y+ + + + L E+A M + +
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
+ SLL + G E I +++ N + I + + G+FE+A Y + E
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 247 SISGTGDPRVPNILLAAY 264
D R +L+ Y
Sbjct: 555 KSRCDPDERTLEAVLSVY 572
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 150/332 (45%), Gaps = 9/332 (2%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQEL 106
LL + + K++ EA + L+ + E G + Y+ +L +GQ D + +M+ E
Sbjct: 152 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SP+VV YN + + D A F E+ + I PD ++Y+++ K +
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 271
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA L++M + N Y++L+ Y++ G E +R++K+M + + ++
Sbjct: 272 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
SL K G+ ++A +++D D NI+L Y + L ++ ++ GI
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + T+ +L Y G ++K + F + V+ V +R + AA ++ G +D A
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI---GKMDDA 448
Query: 346 EHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
+ + G + YN L++ + G +
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 5/280 (1%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T S L+ S + K EA + + M+ G YN MLN Y + G L
Sbjct: 321 LPDVV----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376
Query: 98 KVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ + L +PD T+N+ + A A+ + A F E++ + PD ++Y T+
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ ++ + A +M + ++ AY+ L+ + G + + ++M+
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ ++ +I++L KLG A+NI+D ++ D V ++L+ Y ++E A
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ +V+ GI+P + L GY K G++++ L F++ +
Sbjct: 557 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 596
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 4/292 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ + ++G L K +++ E+ N D+V ++ + A+ F
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD + YS L Y + EKA M N V Y +L++ Y +G D
Sbjct: 527 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 586
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E L ++++M+ K + Y+ +I L + G A+ + E D NI+L
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ A + L +K T + G + ++E+ + F S +
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI--SRSR 704
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
VP + L ++G ++ AE + +++NAG ++ + N ++R K
Sbjct: 705 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 756
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 164/361 (45%), Gaps = 22/361 (6%)
Query: 29 RARENF--FENLPDKMRGP--DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
RA E F F + +K P +TC++LL +++ ++ A L +M +N
Sbjct: 166 RADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFN 225
Query: 85 HMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
M+N+ G+L K + ++ P++VTYN + S E A+ +K+
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG----- 198
KI+PD +Y +L S K E+A+ +EM ++ R + V Y++L+ + N G
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 199 --YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
YKDE+L KK +S + Y +I +L ++AE + E + + D
Sbjct: 346 SAYKDEML---KKGIS----PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
NIL+ Y + A ++ ++ GIKP T+ L KK +M++ + FKK
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI- 457
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
+ +PD + A + ++ GA LL + E+ +N++++ + + GK
Sbjct: 458 -TSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 376 M 376
+
Sbjct: 517 V 517
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/328 (18%), Positives = 143/328 (43%), Gaps = 4/328 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++H Y + + A+A++ M Y +++ G+L++ ++ +E+
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P V YN + ++ + + A E+ K I P +Y++L +
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRT 377
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A +KE++++ + + Y+ L++ Y + + +M++ K YT +
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K ++A++++ + S D + N L+ + + + ++ A + +
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + G+ ++G++E+ E F + R PDH + +GDI A
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEM--KRRGIKPDHISFNTLISGYSRRGDIKDA 555
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ + + G T + YN+L++ K
Sbjct: 556 FRVRNEMLDTGFNPTVLTYNALVQGLCK 583
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+H+ +++ EAE +++++ E G + YN ++N Y K + E
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L P TY L + +N + A+ F ++ + PD I ++ L +
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A LK+M++ + V +++++ + G +E ++ +M K + + +
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS + G+ + A + +E N L+ + ++AE +V+KG+
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602
Query: 286 KPCYTTWELLTWGYLK 301
P TT+ L G K
Sbjct: 603 TPDDTTYFTLIEGIAK 618
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++LLH + + EA+ L +K++ G L + +N +++ + SN + ++L+++
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD VT+N + + E A + F E+K+ I PD IS++TL S Y +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + Y++L+ D + K+M+S +D Y +
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 226 ISSLVKLGEFEKAENIYDE 244
I + K+ NI DE
Sbjct: 613 IEGIAKV-------NIPDE 624
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ + + A QR +A+ + +E PD + T + L++ Y + + +A
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGIS--PDAI----TYNILINGYCRCANAKKAFL 417
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
L ++M G Y +L++ ++ + + +++ + PD + +N +
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
S ++ + A + ++ + K+ PD ++++T+ + + E+A EM++R + + +
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
++++L+S Y+ G + R+ +M+ Y ++ L K E + AE + E
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 246 ESISGTGD 253
S T D
Sbjct: 598 VSKGMTPD 605
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 40 DKMRGPD---TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
D+M+ P T + ++ + + K EA L ++M G + +N +++ Y G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 97 DKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++ E L +P V+TYN + + + AE+ E+ + PD +Y TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 156 TSLYIKMELPEKAATT 171
K+ +P++ T
Sbjct: 613 IEGIAKVNIPDENKNT 628
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 165/374 (44%), Gaps = 12/374 (3%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F L +K P TC+ LL S V+ + + + + M CG ++ M+N +
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ G++D ++ ++++K +P+VVTYN + + A + +++K ++ P +
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y L + +K+E ++A LKEM R N V Y++L+ Y +G L+I M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+S N +I K + E AE++ +E + G + ++ + +
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRL 328
+ A F ++ + KP LL G + G+ + +E + + + G V + L
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQ 385
I + L E G + A LL + G V I YN+L+ K GK+ + E M
Sbjct: 449 I----HGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV 504
Query: 386 KDNVQMDAETQKVL 399
+ +Q D T +L
Sbjct: 505 RRGIQPDMYTYNML 518
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 3/264 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ + + K E L E+M G YN +L+ + G++++ + E KK
Sbjct: 481 NTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKK 540
Query: 109 NTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N + PD TY + + N E EK F E+ KI+ + + Y TL Y + +
Sbjct: 541 NGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMRE 600
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +M R + YSSL+ +N+G D ++ +M N YT +I
Sbjct: 601 AFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIG 660
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIK 286
KLG+ K ++I E SI+ ++ I++ + ++ A N + KGI
Sbjct: 661 GYCKLGQMHKVDSILQEM-SINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIV 719
Query: 287 PCYTTWELLTWGYLKKGQMEKVLE 310
P T+ LT G+ K+G+ME+ L+
Sbjct: 720 PDAVTYNALTNGFCKEGKMEEALK 743
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 154/361 (42%), Gaps = 14/361 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
TC++L+ Y ++ + AE L+E+M G + + +++ + D + E
Sbjct: 339 TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEM 398
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L +N P+ L ++ + A + + L + + ++ + L +
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+AA LKEM +R + ++Y++L+ G +E ++ ++M+ + + Y +
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNML 518
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L +G+ E+A ++ E + D I++ Y N++E E + +VT I
Sbjct: 519 LHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKI 578
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK----LEEQGD 341
+ + L Y + G M E F+ + +P +A Y+ L G
Sbjct: 579 EQNAVVYGTLIRAYCENGNMR---EAFRLRDDMRSRGIPQ---TSATYSSLIHGLSNIGL 632
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKV 398
+D A LL +R G + Y +L+ Y K G+M + I++ M +NV + T +
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692
Query: 399 L 399
+
Sbjct: 693 M 693
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 161/383 (42%), Gaps = 25/383 (6%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E + DK PD T +A++H Y + E+ + KM+ G + + +N ++
Sbjct: 319 ELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSS 378
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+G+ ++ Q + K PD+V+Y++ L A++ F + I +
Sbjct: 379 LCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVAN 438
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++ L S + K + ++A EM+ + R + V YS+L+S + MG + + +
Sbjct: 439 CHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFS 498
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI--- 265
+M+S+ + N Y +I G+ KA+ + E S G PR PNI+ + I
Sbjct: 499 QMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS---KGIPR-PNIVFFSSIIHS 554
Query: 266 --NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKW 322
N ++ A +N ++ G +P T+ L GY G+MEK + +
Sbjct: 555 LCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 614
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH----VSTEIYNSLLRTYAKAGKMPL 378
V + + + Y K G ID L+ R H +T Y+ +L AG+
Sbjct: 615 VVTYNTLVSGYCK---SGKIDDG---LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSA 668
Query: 379 I--IVERMQKDNVQMDAETQKVL 399
+ M +D +T K+L
Sbjct: 669 AKKMFHEMIDSGTAVDIDTYKIL 691
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 146/331 (44%), Gaps = 7/331 (2%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK- 108
L K++ EA + L+ +MS+ G + + YN ++ + + + M+Q + K
Sbjct: 197 FLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKE 256
Query: 109 --NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SPDVV++N + Q + A E+ + ++PD ++Y+++ K +
Sbjct: 257 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMD 316
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA L++M + + + Y++++ Y+ G+ E ++++KM S + +
Sbjct: 317 KAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFM 376
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
SSL K G + AE I+ + D +ILL Y + + ++ + KGI
Sbjct: 377 SSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ +L + K+G M++ + F + G VR V + + +A+ ++ D
Sbjct: 437 ANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLA--DAM 494
Query: 346 EHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
E + +T +Y+SL+ + G +
Sbjct: 495 EKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 123/298 (41%), Gaps = 10/298 (3%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDKVPQMLQ- 104
+L+H + + +A+ L+ +M G P P ++ +++ + G++ +
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGI---PRPNIVFFSSIIHSLCNEGRVMDAHDVFNL 570
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ P +VT+N + E A + I+PD ++Y+TL S Y K
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK 630
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ +EM + + V YS +L + G +++ +M+ ++ Y
Sbjct: 631 IDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKI 690
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L + ++A ++ + ++ D + N ++ A + E A + + T G
Sbjct: 691 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSG 750
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+ P +T+ ++ LK+G +E+ F S P RL+ L ++GDI
Sbjct: 751 LVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS--GCAPSSRLLNDIIRMLLQKGDI 806
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + ++ QN A +M+ M + G YN ++N NGQL++
Sbjct: 284 PDQI----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+L Q + + PD+ T+N +AA + N E A ++ + PD +++ L +
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K+ P A +EM+ C + V Y++L+ ++G + L + K M S
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I L K E+AE ++D+ + + + N L+ +++ A
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
N+++++G++P T+ + Y K+G ++K
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YNH+LN+ + ++ + + E+ + PDVVT+N + A + TA E+
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMS 208
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +++TL +++ E A M + C +V + L++ Y +G +
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L ++ ++ + + Y ++ L + A + D D NI++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
QLE A+ N++V +G P TT+ L ++E+ L+ ++ +V+
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV--TVKG 386
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD N L + GD A L ++N+G E+ YN+L+ GK+
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 160/397 (40%), Gaps = 47/397 (11%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A Q R E + + PD T + L+ +V+ A + +M E G
Sbjct: 190 ALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249
Query: 79 CPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ N ++N Y G++ D + + QE+ PD +TYN ++ + A K
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS----- 192
+ + DPD +Y+ + + K E+A L +M R C + +++L++
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 193 ---------------------LYT---------NMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+YT +G LR++++M + ++ Y
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP---NILLAAYINRNQLEMAESFYNR 279
+I +L LG+ KA ++ + ES TG PR N ++ + ++E AE +++
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMES---TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +GI T+ L G K +++ E + I P++ + +Q
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE--GLQPNNITYNSILTHYCKQ 544
Query: 340 GDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGK 375
GDI A +L T+ N V Y +L+ KAG+
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 118/279 (42%), Gaps = 14/279 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + PD T + L+ + K +A L++ M G + + YN +++
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++++ ++ ++ + S + +T+N + + A + ++ + P+ I
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+++ + Y K +KAA L+ M + V Y +L++ G L++ + M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR--- 267
+ Y V+ SL + A +++ E + G+P P+ L + R
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV---GEP--PDALTYKIVFRGLC 647
Query: 268 ---NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++ A F +V KG P ++++ +L G L G
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + ++ QN A +M+ M + G YN ++N NGQL++
Sbjct: 284 PDQI----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+L Q + + PD+ T+N +AA + N E A ++ + PD +++ L +
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K+ P A +EM+ C + V Y++L+ ++G + L + K M S
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I L K E+AE ++D+ + + + N L+ +++ A
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
N+++++G++P T+ + Y K+G ++K
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YNH+LN+ + ++ + + E+ + PDVVT+N + A + TA E+
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 208
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +++TL +++ E A M + C +V + L++ Y +G +
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L ++ ++ + + Y ++ L + A + D D NI++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
QLE A+ N++V +G P TT+ L ++E+ L+ ++ +V+
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV--TVKG 386
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD N L + GD A L ++N+G E+ YN+L+ GK+
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 160/397 (40%), Gaps = 47/397 (11%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A Q R E + + PD T + L+ +V+ A + +M E G
Sbjct: 190 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249
Query: 79 CPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ N ++N Y G++ D + + QE+ PD +TYN ++ + A K
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS----- 192
+ + DPD +Y+ + + K E+A L +M R C + +++L++
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 193 ---------------------LYT---------NMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+YT +G LR++++M + ++ Y
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP---NILLAAYINRNQLEMAESFYNR 279
+I +L LG+ KA ++ + ES TG PR N ++ + ++E AE +++
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMES---TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +GI T+ L G K +++ E + I P++ + +Q
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE--GLQPNNITYNSILTHYCKQ 544
Query: 340 GDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGK 375
GDI A +L T+ N V Y +L+ KAG+
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 118/279 (42%), Gaps = 14/279 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + PD T + L+ + K +A L++ M G + + YN +++
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++++ ++ ++ + S + +T+N + + A + ++ + P+ I
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+++ + Y K +KAA L+ M + V Y +L++ G L++ + M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR--- 267
+ Y V+ SL + A +++ E + G+P P+ L + R
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV---GEP--PDALTYKIVFRGLC 647
Query: 268 ---NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++ A F +V KG P ++++ +L G L G
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 145/333 (43%), Gaps = 4/333 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+++Y + EA L+ S G L YN +L G+ D+ +L E
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ +P+ TYN L +++ A++ F E+ + + PD +S+S+L + +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +EME+ + V Y+ L+ + G + L++ +M++ M+ Y
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K F A+ +++E D L+ Y ++ A + + +V +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP T+ L G+ K G+M + E + I + +PDH N G + A
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMI--RKDIIPDHISYGTVLNGFCSSGLLPEA 591
Query: 346 EHLLVTLRNAGHVSTEIY-NSLLRTYAKAGKMP 377
+L + G + N+L++ Y ++G MP
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 3/283 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + K A+A+ L +M E G + + ++ Y +G +DK + + +
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ N PD VTYN + + A++ + ++ + I PD ISY T+ + + L
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +M ++ R N V ++L+ Y G + KM+S + Y +
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I +K EKA + +E E + N++L + +++ AE +++ GI
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGI 708
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
P T+ L G++ + M++ + + R VPD R
Sbjct: 709 NPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ--RGLVPDDRF 749
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N FE + PD T + L+ + + + A+ L + M + + Y +LN +
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582
Query: 91 ISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
S+G L + + Q L+K P++VT N + D A + ++ I PD
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
SY+TL Y+K EKA + EMEKR + N + Y+ +L+ + G E ++ +K
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
M+ + + A Y+ +I+ V ++A +DE
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDE 737
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 136/327 (41%), Gaps = 20/327 (6%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM----------------SECGFL-KC 79
+ P+ + SA++H V+ ++ +EA+A + +M S C +
Sbjct: 127 HFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSV 186
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
L Y+ ++ Y+ +L + + Q L+ K S + N L + A + +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ + I+ + + + + + K E L +ME + + V Y++L++ Y G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+E ++ S + Y ++ L K+G++++A+++ E + T + N
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LL R+ + A+ ++ + +G+ P ++ L + G + + L F++ S
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGA 345
VPD+ + T + G + A
Sbjct: 427 --GIVPDNVIYTILIDGFCRNGALSDA 451
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 6/279 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQELK 107
L+ +Y + + EAE LM +M E G YN ++ Y+ Q +++E++
Sbjct: 215 LIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEME 274
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PDVVT+ + L A + E AE+ F +K + P+ SY+ L + Y + PE
Sbjct: 275 ASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPE 334
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KAA + + K+ Y++LL Y G + V +WK M Y ++
Sbjct: 335 KAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTIL 394
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ K G +++A ++ +E+++ D V N+LL +Y+ + A + T G
Sbjct: 395 DAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFL 454
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
P T+ L +G+L+ K L+ ++ + R +PD
Sbjct: 455 PDSFTYCTLIYGFLRVRDQTKALKYHREMMN--RGQLPD 491
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 145/351 (41%), Gaps = 53/351 (15%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+E PD + T S L++S V+ S E AL + M + G + + +
Sbjct: 131 FYEVFPDSV----TFSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCD 186
Query: 93 NGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+L + + E++K P +VV YN+ + A E AE E+++ I P+ +
Sbjct: 187 AGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGT 246
Query: 152 YSTLTSLYIKMELPEK----AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
Y+ L + Y++ + P++ A ++EME + V ++ LL Y + G ++ +++
Sbjct: 247 YNALITGYLEAK-PKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVF 305
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+M + + N YT +I+ AY R
Sbjct: 306 NRMKARGVQPNSYSYTALIN-----------------------------------AYAER 330
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPD 325
E A + + +G+ P T+ L Y + G +E V +K K G V V
Sbjct: 331 RCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTY 390
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGK 375
++ A ++QG A L+ +N GH +YN LL +Y + G+
Sbjct: 391 MTILDA----FQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGR 437
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 3 RRRPHGAQVRAQSYRQRV---AQAQALQTRARENFFENLPDKMRGP--DTCSALLHSYVQ 57
R + G Q + SY + A+ + + AR FE + + P +T +ALL +Y +
Sbjct: 307 RMKARGVQPNSYSYTALINAYAERRCPEKAARA--FEMIRKQGVNPTVETYTALLDAYRR 364
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVT 116
+A+ + M G + + Y +L+ + G+ + +++E K + PD++
Sbjct: 365 AGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMV 424
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
YN+ L + A LE+K PD +Y TL ++++ KA +EM
Sbjct: 425 YNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMM 484
Query: 177 KRTCRKNRVAYSSLLSL 193
R + Y+ L ++
Sbjct: 485 NRGQLPDPKTYAKLRAI 501
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 152/349 (43%), Gaps = 14/349 (4%)
Query: 34 FFENLPDKMRGPDTC----SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FFE+L K RG C +ALL + + EA ++++M + G + YN +
Sbjct: 182 FFEDL--KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGT 239
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G ++ + L + K P+ TYN + A A+ + A F +KK P+
Sbjct: 240 YARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN 299
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + + K L+EM + C NRV ++++L++ G +D V R+
Sbjct: 300 VNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN 359
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M S +++ Y +IS+ + G A +YDE S T N LL +
Sbjct: 360 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 419
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSV-RKWVPDH 326
A+S ++++ G KP ++ LL Y K G + K+ +G++ WV
Sbjct: 420 DWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILR 479
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
L+ A + ++G E ++ G+ I+NS+L YAK G
Sbjct: 480 TLVIANFKCRR----LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 524
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 40/364 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+ + + A L ++ G + + YN +L++Y G+ ++ +L+E++
Sbjct: 93 TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR 152
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD T + +AAC + A F +LK P ++Y+ L ++ K
Sbjct: 153 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 212
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LKEME C+ + V Y+ L Y G+ +E + M S N Y V+
Sbjct: 213 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 272
Query: 227 SSLVKLGEFEKAENIYD----------------------------------EWESISGTG 252
++ +G ++A ++D E S SG
Sbjct: 273 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 332
Query: 253 DPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
RV N +LA R + N + + G++ T+ L Y + G +
Sbjct: 333 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKM 392
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV-TLRNAGHVSTEIYNSLLRTY 370
+ + I S + P A N L QGD A+ ++ L+N + + Y+ LL+ Y
Sbjct: 393 YDEMISS--GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 450
Query: 371 AKAG 374
AK G
Sbjct: 451 AKGG 454
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 1/255 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ +Y + A + ++M GF C YN +LN+ G ++ +
Sbjct: 371 DTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSK 430
Query: 106 LKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ KN P+ +Y+L L A + E E+ I P W+ TL K
Sbjct: 431 MLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRR 490
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E +E++ + + + V ++S+L++Y G + ++ + + Y
Sbjct: 491 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 550
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ K E +AE I + +S D N ++ + + ++ A+ + ++ G
Sbjct: 551 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 610
Query: 285 IKPCYTTWELLTWGY 299
+ PC T+ L GY
Sbjct: 611 MAPCVVTYHTLVGGY 625
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 11/270 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL+ + + A++++ KM + GF Y+ +L Y G + + +E+
Sbjct: 407 TYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEV 466
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
T P V + A E EKAF E+K PD + ++++ ++Y K L
Sbjct: 467 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 526
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA +++ + + Y+SL+ +Y E +I K++ S K + Y V
Sbjct: 527 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 586
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I+ K G ++A+ I E D P + L+ Y + A N +
Sbjct: 587 INGFCKQGLIKEAQRILSEM-----IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 641
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ +KP T+ + Y K + ++ E
Sbjct: 642 IHHNLKPMELTYRRVVDSYCKAKRYDEARE 671
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 126/320 (39%), Gaps = 41/320 (12%)
Query: 94 GQLDKVPQMLQE--LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
GQ D V +L E L + DV Y L A + E A + F EL++ + P ++
Sbjct: 67 GQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVT 126
Query: 152 YSTLTSLYIKM------------------------------------ELPEKAATTLKEM 175
Y+ + +Y +M L ++A +++
Sbjct: 127 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDL 186
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ R V Y++LL ++ G E LR+ K+M + + Y + + + G F
Sbjct: 187 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 246
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
E+A D S + N ++ AY N +++ A + ++R+ G P T+ L+
Sbjct: 247 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLI 306
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
KK + +LE ++ S P+ ++G D +L +++
Sbjct: 307 FGMLGKKSRFTAMLEMLEEM--SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSC 364
Query: 356 G-HVSTEIYNSLLRTYAKAG 374
G +S + YN+L+ Y + G
Sbjct: 365 GVELSRDTYNTLISAYGRCG 384
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFL 77
+A + + E F+ + + PD +++L Y +N ++A + + + + G
Sbjct: 483 IANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLS 542
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN ++++Y + + + ++L++LK + PDVV+YN + Q + A++
Sbjct: 543 PDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRI 602
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E+ + P ++Y TL Y +E+ +A + M + + Y ++ Y
Sbjct: 603 LSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCK 662
Query: 197 MGYKDE 202
DE
Sbjct: 663 AKRYDE 668
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 138/278 (49%), Gaps = 40/278 (14%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQN---KKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
E FFE++P+ MR ++LL SY + K +AE++ +KM + G L P PYN M +
Sbjct: 130 EKFFESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTS 189
Query: 89 LYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKK-TKID 146
LY S G DKV ++L+E+K+N D VT N L A+ +D T +K + K+ T++D
Sbjct: 190 LYSSLGNRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITRLD 249
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
T+ M K AY L+SLY G ++V R+
Sbjct: 250 ----------------------GLTMLAMAK--------AYE-LMSLYGEAGEIEDVHRV 278
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY-DEWESISGTGDPRVPNILLAAYI 265
W K + K N+ E+ +I SL+KLG+ + AE IY +EWE D R+P++L++ Y
Sbjct: 279 WDKYKATRQKDNE-EFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYR 337
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ + A+ N+ T I+ T LL KKG
Sbjct: 338 EKGMVMKADKLVNK--TLWIRGLATPITLLLEEMDKKG 373
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 32 ENFFEN-LPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNL 89
ENFFE+ +P+ M+ LL Y ++ + ++AEA+ EKM E G P+N +++L
Sbjct: 434 ENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISL 493
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 125
Y G+L V +L ++K KN PD+VT N L A A
Sbjct: 494 YSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANA 530
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 145/333 (43%), Gaps = 4/333 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+++Y + EA L+ S G L YN +L G+ D+ +L E
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ +P+ TYN L +++ A++ F E+ + + PD +S+S+L + +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +EME+ + V Y+ L+ + G + L++ +M++ M+ Y
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K F A+ +++E D L+ Y ++ A + + +V +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP T+ L G+ K G+M + E + I + +PDH N G + A
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR--KDIIPDHISYGTVLNGFCSSGLLPEA 591
Query: 346 EHLLVTLRNAGHVSTEIY-NSLLRTYAKAGKMP 377
+L + G + N+L++ Y ++G MP
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 141/333 (42%), Gaps = 4/333 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++++ +++K + M G + YN ++N Y G +++ Q+L
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P ++TYN L + A+ +E+ + + P+ +Y+TL + +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM +R + V++SSL+ + G+ + L +++M ++ YT +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + G A + DE + D N L + A+ +N +V +G+
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + T+ L GY K G M+K L F+ + + K PD + + G++ A
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK--PDKVTYNTLIDGFCKAGEMGRA 556
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP 377
+ L + + I Y ++L + +G +P
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 3/283 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + K A+A+ L +M E G + + ++ Y +G +DK + + +
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ N PD VTYN + + A++ + ++ + I PD ISY T+ + + L
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +M ++ R N V ++L+ Y G + KM+S + Y +
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I +K EKA + +E E + N++L + +++ AE +++ GI
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGI 708
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
P T+ L G++ + M++ + + R VPD R
Sbjct: 709 NPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ--RGLVPDDRF 749
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N FE + PD T + L+ + + + A+ L + M + + Y +LN +
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582
Query: 91 ISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
S+G L + + Q L+K P++VT N + D A + ++ I PD
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
SY+TL Y+K EKA + EMEKR + N + Y+ +L+ + G E ++ +K
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
M+ + + A Y+ +I+ V ++A +DE
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDE 737
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 136/327 (41%), Gaps = 20/327 (6%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM----------------SECGFL-KC 79
+ P+ + SA++H V+ ++ +EA+A + +M S C +
Sbjct: 127 HFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSV 186
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
L Y+ ++ Y+ +L + + Q L+ K S + N L + A + +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ + I+ + + + + + K E L +ME + + V Y++L++ Y G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+E ++ S + Y ++ L K+G++++A+++ E + T + N
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LL R+ + A+ ++ + +G+ P ++ L + G + + L F++ S
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGA 345
VPD+ + T + G + A
Sbjct: 427 --GIVPDNVIYTILIDGFCRNGALSDA 451
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 11/331 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-----QLDKVPQML 103
SAL+ +Y ++ + EA ++E M G + YN +++ G L QML
Sbjct: 248 SALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQML 307
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q+ PD T+N LAAC+ E A F E+ D +Y+T K
Sbjct: 308 QD---GLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCG 364
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
A + +ME + N V YS+L+ ++ + DE L++ +KM SL +++ Y
Sbjct: 365 NMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYN 424
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+++ VK G++++ + +E E + D N L+ Y + +L+M + +
Sbjct: 425 TLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 484
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+ P T+ L Y K G + S K D L ++ + L + G ++
Sbjct: 485 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLK--ADVVLFSSFIDTLAKNGLVE 542
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
A LL + G + YN+++ + K+
Sbjct: 543 CALSLLDEMMKMGIKPNVVTYNTIIDAFGKS 573
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 11/260 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ + + +K EA L EKM + YN +L +Y+ G+ D++ + +E+
Sbjct: 387 TYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEM 446
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K D VTYN + Q + +++ + P ++YSTL +Y K +
Sbjct: 447 EKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMH 506
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A + ++ + + V +SS + G + L + +MM + K N Y +
Sbjct: 507 GDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTI 566
Query: 226 ISSLVKLGEF-EKAENIYD-EWESISGTGDPRVPNILLAAYINRNQLEMAES-------- 275
I + K F E+ +I D + G RV N ++ + + M S
Sbjct: 567 IDAFGKSKIFTEEDSDIGDMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILE 626
Query: 276 FYNRLVTKGIKPCYTTWELL 295
+ ++V +G++P T+ +
Sbjct: 627 LFQKMVQQGVRPNVVTFSAI 646
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 108/277 (38%), Gaps = 14/277 (5%)
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ A + A +AF ++S L S Y + L +A L+ M+
Sbjct: 216 IGALGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGL 275
Query: 181 RKNRVAYSSLLSLYTNMGYKDE-VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
R V+Y++++ G L +++M+ + + ++++ + G E A
Sbjct: 276 RPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDAR 335
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
++DE + D N + A + +A + KP T+ L G+
Sbjct: 336 TVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGF 395
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNA 355
K + ++ L+ ++ + S+R +L YN L + G D + +
Sbjct: 396 SKLEKYDEALK-LREKMKSLRI-----QLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKL 449
Query: 356 G-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNV 389
G T YNSL+ Y K G++ ++ +V+ M+ V
Sbjct: 450 GIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGV 486
>gi|115471209|ref|NP_001059203.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|34394024|dbj|BAC84055.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113610739|dbj|BAF21117.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|117380751|gb|ABK34463.1| DNA-binding protein [Oryza sativa Japonica Group]
Length = 411
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 137/316 (43%), Gaps = 19/316 (6%)
Query: 84 NHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
N M+ LY I+ G++ V +++ K+N P TY L + ND E E+K
Sbjct: 85 NQMILLYKRIAPGKVASVLMLME--KENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMK 142
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR--TCRKNRVAYSSLLSLYTNMGY 199
I+P + + + YI L EKA +KEME + + R SLL LY +
Sbjct: 143 AYGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNK 202
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
++V RIW+ M + D + I + +LG EKAE ++ + + N
Sbjct: 203 PNDVARIWE--MCTEPMLED--FLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNA 258
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+L Y L + F R+ G TW+ L Y+ G++EK + +V
Sbjct: 259 MLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKA----DSFLLNV 314
Query: 320 RKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ PD + + +Y L ++GDI E + L+N G+ + Y LL Y A
Sbjct: 315 AEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAK 374
Query: 375 KMPLIIVERMQKDNVQ 390
+ERM+ DNV+
Sbjct: 375 VPAHGFLERMRGDNVR 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 25 ALQTRARENF--FENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
L +A E F N P+K+ +A+L+ Y QNK ++ + +E+M G PL
Sbjct: 232 GLIEKAEETFEAMANAPEKLSS-KYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLT 290
Query: 83 YNHMLNLYISNGQLDKVPQML---QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
++ ++NLY+++G+++K L E + P +Y + A + D EK F
Sbjct: 291 WDALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDR 350
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
LK P + Y+ L Y+ ++P A L+ M R + +SL +L
Sbjct: 351 LKNVGYAPRPLHYAVLLEAYVNAKVP--AHGFLERMRGDNVRPTKKIVTSLDTL 402
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + ++ QN A +M+ M + G YN ++N NGQL++
Sbjct: 192 PDQI----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 247
Query: 99 VPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+L Q + + PD+ T+N +AA + N E A ++ + PD +++ L +
Sbjct: 248 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 307
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K+ P A +EM+ C + V Y++L+ ++G + L + K M S
Sbjct: 308 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 367
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I L K E+AE ++D+ + + + N L+ +++ A
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
N+++++G++P T+ + Y K+G ++K
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKK 457
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YNH+LN+ + ++ + + E+ + PDVVT+N + A + TA E+
Sbjct: 57 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 116
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +++TL +++ E A M + C +V + L++ Y +G +
Sbjct: 117 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 176
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L ++ ++ + + Y ++ L + A + D D NI++
Sbjct: 177 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 236
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
QLE A+ N++V +G P TT+ L ++E+ L+ ++ +V+
Sbjct: 237 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV--TVKG 294
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD N L + GD A L ++N+G E+ YN+L+ GK+
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 350
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 160/397 (40%), Gaps = 47/397 (11%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A Q R E + + PD T + L+ +V+ A + +M E G
Sbjct: 98 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 157
Query: 79 CPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ N ++N Y G++ D + + QE+ PD +TYN ++ + A K
Sbjct: 158 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 217
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS----- 192
+ + DPD +Y+ + + K E+A L +M R C + +++L++
Sbjct: 218 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277
Query: 193 ---------------------LYT---------NMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+YT +G LR++++M + ++ Y
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 337
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP---NILLAAYINRNQLEMAESFYNR 279
+I +L LG+ KA ++ + ES TG PR N ++ + ++E AE +++
Sbjct: 338 NTLIDNLCSLGKLGKALDLLKDMES---TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +GI T+ L G K +++ E + I P++ + +Q
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS--EGLQPNNITYNSILTHYCKQ 452
Query: 340 GDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGK 375
GDI A +L T+ N V Y +L+ KAG+
Sbjct: 453 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 489
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 118/279 (42%), Gaps = 14/279 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + PD T + L+ + K +A L++ M G + + YN +++
Sbjct: 321 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 380
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++++ ++ ++ + S + +T+N + + A + ++ + P+ I
Sbjct: 381 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 440
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+++ + Y K +KAA L+ M + V Y +L++ G L++ + M
Sbjct: 441 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR--- 267
+ Y V+ SL + A +++ E + G+P P+ L + R
Sbjct: 501 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV---GEP--PDALTYKIVFRGLC 555
Query: 268 ---NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++ A F +V KG P ++++ +L G L G
Sbjct: 556 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 152/349 (43%), Gaps = 14/349 (4%)
Query: 34 FFENLPDKMRGPDTC----SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FFE+L K RG C +ALL + + EA ++++M + G + YN +
Sbjct: 273 FFEDL--KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGT 330
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G ++ + L + K P+ TYN + A A+ + A F +KK P+
Sbjct: 331 YARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN 390
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + + K L+EM + C NRV ++++L++ G +D V R+
Sbjct: 391 VNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN 450
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M S +++ Y +IS+ + G A +YDE S T N LL +
Sbjct: 451 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 510
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSV-RKWVPDH 326
A+S ++++ G KP ++ LL Y K G + K+ +G++ WV
Sbjct: 511 DWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILR 570
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
L+ A + ++G E ++ G+ I+NS+L YAK G
Sbjct: 571 TLVIANFKCRR----LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 40/364 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+ + + A L ++ G + + YN +L++Y G+ ++ +L+E++
Sbjct: 184 TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR 243
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD T + +AAC + A F +LK P ++Y+ L ++ K
Sbjct: 244 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 303
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LKEME C+ + V Y+ L Y G+ +E + M S N Y V+
Sbjct: 304 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 363
Query: 227 SSLVKLGEFEKAENIYD----------------------------------EWESISGTG 252
++ +G ++A ++D E S SG
Sbjct: 364 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 423
Query: 253 DPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
RV N +LA R + N + + G++ T+ L Y + G +
Sbjct: 424 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKM 483
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV-TLRNAGHVSTEIYNSLLRTY 370
+ + I S + P A N L QGD A+ ++ L+N + + Y+ LL+ Y
Sbjct: 484 YDEMISS--GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 541
Query: 371 AKAG 374
AK G
Sbjct: 542 AKGG 545
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 1/255 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ +Y + A + ++M GF C YN +LN+ G ++ +
Sbjct: 462 DTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 106 LKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ KN P+ +Y+L L A + E E+ I P W+ TL K
Sbjct: 522 MLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRR 581
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E +E++ + + + V ++S+L++Y G + ++ + + Y
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ K E +AE I + +S D N ++ + + ++ A+ + ++ G
Sbjct: 642 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Query: 285 IKPCYTTWELLTWGY 299
+ PC T+ L GY
Sbjct: 702 MAPCVVTYHTLVGGY 716
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 11/270 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL+ + + A++++ KM + GF Y+ +L Y G + + +E+
Sbjct: 498 TYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEV 557
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
T P V + A E EKAF E+K PD + ++++ ++Y K L
Sbjct: 558 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 617
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA +++ + + Y+SL+ +Y E +I K++ S K + Y V
Sbjct: 618 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I+ K G ++A+ I E D P + L+ Y + A N +
Sbjct: 678 INGFCKQGLIKEAQRILSEM-----IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ +KP T+ + Y K + ++ E
Sbjct: 733 IHHNLKPMELTYRRVVDSYCKAKRYDEARE 762
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 126/320 (39%), Gaps = 41/320 (12%)
Query: 94 GQLDKVPQMLQE--LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
GQ D V +L E L + DV Y L A + E A + F EL++ + P ++
Sbjct: 158 GQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVT 217
Query: 152 YSTLTSLYIKM------------------------------------ELPEKAATTLKEM 175
Y+ + +Y +M L ++A +++
Sbjct: 218 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDL 277
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ R V Y++LL ++ G E LR+ K+M + + Y + + + G F
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 337
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
E+A D S + N ++ AY N +++ A + ++R+ G P T+ L+
Sbjct: 338 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLI 397
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
KK + +LE ++ S P+ ++G D +L +++
Sbjct: 398 FGMLGKKSRFTAMLEMLEEM--SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSC 455
Query: 356 G-HVSTEIYNSLLRTYAKAG 374
G +S + YN+L+ Y + G
Sbjct: 456 GVELSRDTYNTLISAYGRCG 475
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFL 77
+A + + E F+ + + PD +++L Y +N ++A + + + + G
Sbjct: 574 IANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLS 633
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN ++++Y + + + ++L++LK + PDVV+YN + Q + A++
Sbjct: 634 PDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRI 693
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E+ + P ++Y TL Y +E+ +A + M + + Y ++ Y
Sbjct: 694 LSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCK 753
Query: 197 MGYKDE 202
DE
Sbjct: 754 AKRYDE 759
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 144/312 (46%), Gaps = 9/312 (2%)
Query: 38 LPDKMRGPD------TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
L D+MRG + TC+ +++ + +++E++ ++K+ + GF+ + YN +++ ++
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G ++ + E+ K SP+V TY + N+ + A K E+K I+ D
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y L + + A+ L E+++ N+V YSS++S + + + L + K+M
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ + YT +IS L+K G+ A +Y E + D ++L+ N+ QL
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQL 764
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
E A+ + K + P + L G+ K+G +++ + + + VPD
Sbjct: 765 ENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLD--KGLVPDDTTYD 822
Query: 331 AAYNKLEEQGDI 342
N + G++
Sbjct: 823 ILVNGKVKDGNL 834
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 141/332 (42%), Gaps = 9/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ L+ Y + A L +KM+E G + Y ++ NG +DK ++ ++K
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K+ SP V N + E A K F E I + +Y++L S K +
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSE 451
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + ++M ++ R + V+Y++++ + G D ++ +M+ K N Y+ ++
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD 511
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G+ E A +YD + NI++ + ++ +LV +G P
Sbjct: 512 GYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIP 571
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ + G++K+G + L + + IG P+ T N + ++D A
Sbjct: 572 TCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV----SPNVFTYTNLINGFCKSNNMDLA 627
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
++ ++N G + +Y +L+ + + G M
Sbjct: 628 LKVMDEMKNKGIELDVTVYCALIDGFCRKGDM 659
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 154/382 (40%), Gaps = 50/382 (13%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
LL+SYV+ K+ +A + E + C N L+ + N + + + ++ K
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKG 219
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
D T ++ + A + E AE F E K ++ D +YS + K A
Sbjct: 220 VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAAL 279
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L+EM + + V ++ ++ + G E +++ +M+S MN T ++
Sbjct: 280 GLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339
Query: 230 VKLGEFEKAENIYD------------------EWESISGTGD---------------PRV 256
K G+ + A ++D EW +G D P V
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399
Query: 257 PNI--LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N+ L+ Y+ E A ++ V GI +T LL+W K+G+M + ++K
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSW-LCKEGKMSEACSIWEK 458
Query: 315 AIGSVRKWVPDHRLITAAYNKLE----EQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
VRK V R +YN + +QGD+D A + V + G I Y+ L+
Sbjct: 459 M---VRKGV---RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDG 512
Query: 370 YAKAG--KMPLIIVERMQKDNV 389
Y K G + + +RM+ +N+
Sbjct: 513 YFKKGDTEYAFGLYDRMRGENI 534
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 153/371 (41%), Gaps = 47/371 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++LL + K +EA ++ EKM G + YN+M+ + G +D + E
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD----------------- 148
L+K P+++TY++ + + D E A + ++ I P
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554
Query: 149 ------------------WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
++Y+ + ++K A EM K N Y++L
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ + D L++ +M + +++ Y +I + G+ A + E + +
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC----YTTWELLTWGYLKKGQME 306
+ + V + +++ + +E A + R++ +GI PC YTT L G LK+G++
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI-PCDLQIYTT---LISGLLKEGKLL 730
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNS 365
E + + + + +PD + + L +G ++ A+ +L + R + IYN+
Sbjct: 731 FASELYAEMLA--KGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNT 788
Query: 366 LLRTYAKAGKM 376
L+ + K G +
Sbjct: 789 LITGHFKEGNL 799
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/357 (18%), Positives = 138/357 (38%), Gaps = 46/357 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
++L+ Y++ + EA L ++ CG YN +L+ G++ + + +++ +
Sbjct: 403 NSLIRGYLKARSPEEASKLFDEAVACGIANV-FTYNSLLSWLCKEGKMSEACSIWEKMVR 461
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K P VV+YN + Q D ++A F+E+ + + P
Sbjct: 462 KGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKP-------------------- 501
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC--V 225
N + YS L+ Y G + ++ +M + +++TC +
Sbjct: 502 ---------------NLITYSVLMDGYFKKGDTEYAFGLYDRMRG--ENIAPSDFTCNII 544
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ L K G ++++ + N ++ ++ + A + Y + G+
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV 604
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K M+ L+ + + D + A + +GD+ A
Sbjct: 605 SPNVFTYTNLINGFCKSNNMDLALKVMDEM--KNKGIELDVTVYCALIDGFCRKGDMVNA 662
Query: 346 EHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
LL L+ G + +Y+S++ + K M L + +RM + + D + L
Sbjct: 663 SQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTL 719
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 159/360 (44%), Gaps = 18/360 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A LH + SA A AL M C +N ML S G+ + ++L+++ +
Sbjct: 452 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 511
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEK 167
P+ VTYN +A S+ + A E++ + I P+ +Y T+ S + K+ ++
Sbjct: 512 ---PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 568
Query: 168 AATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A EM K + V Y++L+ Y + G D L +M+ M A Y ++
Sbjct: 569 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 628
Query: 227 SSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+L G +A Y+ E + G G D NIL+ + ++ A + + +
Sbjct: 629 HALFMDGRGTEA---YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDI 342
G++ T+ L + KKGQ+++ + F +A VR+ + PD L A N G+I
Sbjct: 686 GVRATVVTYTALIYALSKKGQVQETDKLFDEA---VRRGIRPDLVLYNALINSHSTSGNI 742
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
D A ++ + ++ YN+L+R G++ +++ M + +Q D T L
Sbjct: 743 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 802
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+AL+ Y K A ++M E G YN +++ +G+ + ++++E+
Sbjct: 590 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 649
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K +PDV TYN+ + + + + A + F + + + ++Y+ L K ++
Sbjct: 650 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 709
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
E +R R + V Y++L++ ++ G D I +M +D Y ++
Sbjct: 710 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 769
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L LG ++A + DE D N L++ Y + ++ A N ++ KG P
Sbjct: 770 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 829
Query: 288 CYTTWELLTWGYLKKGQ 304
T+ L G K GQ
Sbjct: 830 TLLTYNALIQGLCKNGQ 846
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H+ + + EA L+E+M G YN ++N + G + K ++ + +
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 682
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ VVTY + A + + + +K F E + I PD + Y+ L + +
Sbjct: 683 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 742
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + EMEK+ + V Y++L+ +G DE ++ +M + + Y +
Sbjct: 743 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 802
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS G+ + A I +E + N L+ Q + AE+ +V GI
Sbjct: 803 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 862
Query: 286 KPCYTTWELLTWG 298
P +T+ L G
Sbjct: 863 TPDDSTYISLIEG 875
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+++ + + E + L ++ G + YN ++N + ++G +D+ +++ E+
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK +PD VTYN + + A K E+ + I PD ++Y+TL S Y
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 812
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + + Y++L+ G D+ + K+M+ +D+ Y +
Sbjct: 813 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872
Query: 226 ISSL 229
I L
Sbjct: 873 IEGL 876
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 159/360 (44%), Gaps = 18/360 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A LH + SA A AL M C +N ML S G+ + ++L+++ +
Sbjct: 83 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 142
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEK 167
P+ VTYN +A S+ + A E++ + I P+ +Y T+ S + K+ ++
Sbjct: 143 ---PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 199
Query: 168 AATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A EM K + V Y++L+ Y + G D L +M+ M A Y ++
Sbjct: 200 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 259
Query: 227 SSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+L G +A Y+ E + G G D NIL+ + ++ A + + +
Sbjct: 260 HALFMDGRGTEA---YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDI 342
G++ T+ L + KKGQ+++ + F +A VR+ + PD L A N G+I
Sbjct: 317 GVRATVVTYTALIYALSKKGQVQETDKLFDEA---VRRGIRPDLVLYNALINSHSTSGNI 373
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
D A ++ + ++ YN+L+R G++ +++ M + +Q D T L
Sbjct: 374 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 433
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+AL+ Y K A ++M E G YN +++ +G+ + ++++E+
Sbjct: 221 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 280
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K +PDV TYN+ + + + + A + F + + + ++Y+ L K ++
Sbjct: 281 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 340
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
E +R R + V Y++L++ ++ G D I +M +D Y ++
Sbjct: 341 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 400
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L LG ++A + DE D N L++ Y + ++ A N ++ KG P
Sbjct: 401 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 460
Query: 288 CYTTWELLTWGYLKKGQ 304
T+ L G K GQ
Sbjct: 461 TLLTYNALIQGLCKNGQ 477
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H+ + + EA L+E+M G YN ++N + G + K ++ + +
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 313
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ VVTY + A + + + +K F E + I PD + Y+ L + +
Sbjct: 314 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 373
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + EMEK+ + V Y++L+ +G DE ++ +M + + Y +
Sbjct: 374 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 433
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS G+ + A I +E + N L+ Q + AE+ +V GI
Sbjct: 434 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 493
Query: 286 KPCYTTWELLTWG 298
P +T+ L G
Sbjct: 494 TPDDSTYISLIEG 506
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+++ + + E + L ++ G + YN ++N + ++G +D+ +++ E+
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK +PD VTYN + + A K E+ + I PD ++Y+TL S Y
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + + Y++L+ G D+ + K+M+ +D+ Y +
Sbjct: 444 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503
Query: 226 ISSL 229
I L
Sbjct: 504 IEGL 507
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 138/297 (46%), Gaps = 4/297 (1%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
R ++Q + + E+ + + M G TCS LL+ ++ K A+A+ + E + G +
Sbjct: 311 RTGESQTMLSLFAESLKKGV---MLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVP 367
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ YN ++N Y L + +++K ++ PD +TYN + AE
Sbjct: 368 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+E++K+ +DP +++TL Y EK T L +M+++ + + +++ S++ +
Sbjct: 428 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 487
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G E + I M+ N Y +I + ++ G+ E+A + ++ ++ +
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTY 547
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N+LL +Q++ AE L +G++P ++ + KG +K LE ++
Sbjct: 548 NLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 153/360 (42%), Gaps = 45/360 (12%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVV 115
++ K ++A + ++M + G + YN M++ ++ G L+ ++ Q L P+VV
Sbjct: 206 RSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVV 265
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL-----------TSLYIKMEL 164
TYN+ L+ + E+ + PD +YS L T L + E
Sbjct: 266 TYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES 325
Query: 165 PEK----AATTLKEMEKRTCRKNRVA--------------------YSSLLSLYTNMGYK 200
+K A T + C+ +VA Y++L++ Y +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--N 258
I+++M S + + Y +I+ L KL KAE++ E E SG DP V N
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK-SGV-DPSVETFN 443
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
L+ AY QLE + + + KGIK ++ + + K G++ + + I
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI-- 501
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ P+ ++ + + E GD + A L+ ++N+G VS I YN LL+ ++ ++
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG-VSASIVTYNLLLKGLCRSSQI 560
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 39/291 (13%)
Query: 86 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
+LN +G++ K Q+ + L P V YN + D A F ++K
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
I PD I+Y+ L + K+E+ KA + EMEK + +++L+ Y G ++
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+ M K + + V+ + K G+ +A I D+ + +V N ++ AY
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
I E A ++ G+ T+ LL G + Q
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ-------------------- 559
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
ID AE L+ TLRN G + YN+++ G
Sbjct: 560 -----------------IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 593
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 124/321 (38%), Gaps = 42/321 (13%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTK--IDPDWISYSTLTSLYIKMELPEKAA 169
PD +N + AC + D + A + +++ PD SY+ + + + A
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM NR+ Y++++ + G + R+ +M+ K N Y ++S L
Sbjct: 215 KVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGL 274
Query: 230 VKLGEFEKAENIYDE----------------WESISGTGDPR------------------ 255
+ G ++ + DE ++ ++ TG+ +
Sbjct: 275 CRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGA 334
Query: 256 -VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ILL ++ A+ + LV G+ P + L GY + + F++
Sbjct: 335 YTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQ 394
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
R PDH A N L + + AE L++ + +G S E +N+L+ Y A
Sbjct: 395 M--KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 374 GKMP--LIIVERMQKDNVQMD 392
G++ ++ MQ+ ++ D
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSD 473
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+++ ++ +N K EA A+++ M YN +++ YI +G ++ +++++K
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKN 537
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ S +VTYNL L + + AE+ L+ + PD +SY+T+ S +K
Sbjct: 538 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM--------SLFAKMND 219
A L+EM K R +L+S + G ++ ++++M+ S++ M D
Sbjct: 598 ALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 657
Query: 220 AEYTC 224
A C
Sbjct: 658 AYVRC 662
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
++++ +Y+++ + +A L+EKM G + YN +L + Q+D+ +++ L+
Sbjct: 513 NSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL--------- 158
+ PDVV+YN ++AC ++ D + A + E+ K I P + TL S
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHD 632
Query: 159 --------------------------YIKMELPEKAATTLKEMEKR 178
Y++ E K A+ KEM ++
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 152/349 (43%), Gaps = 14/349 (4%)
Query: 34 FFENLPDKMRGPDTC----SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FFE+L K RG C +ALL + + EA ++++M + G + YN +
Sbjct: 273 FFEDL--KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGT 330
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G ++ + L + K P+ TYN + A A+ + A F +KK P+
Sbjct: 331 YARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN 390
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + + K L+EM + C NRV ++++L++ G +D V R+
Sbjct: 391 VNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN 450
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M S +++ Y +IS+ + G A +YDE S T N LL +
Sbjct: 451 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 510
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSV-RKWVPDH 326
A+S ++++ G KP ++ LL Y K G + K+ +G++ WV
Sbjct: 511 DWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILR 570
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
L+ A + ++G E ++ G+ I+NS+L YAK G
Sbjct: 571 TLVIANFKCRR----LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 40/364 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+ + + A L ++ G + + YN +L++Y G+ ++ +L+E++
Sbjct: 184 TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR 243
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD T + +AAC + A F +LK P ++Y+ L ++ K
Sbjct: 244 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 303
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LKEME C+ + V Y+ L Y G+ +E + M S N Y V+
Sbjct: 304 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 363
Query: 227 SSLVKLGEFEKAENIYD----------------------------------EWESISGTG 252
++ +G ++A ++D E S SG
Sbjct: 364 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 423
Query: 253 DPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
RV N +LA R + N + + G++ T+ L Y + G +
Sbjct: 424 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKM 483
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV-TLRNAGHVSTEIYNSLLRTY 370
+ + I S + P A N L QGD A+ ++ L+N + + Y+ LL+ Y
Sbjct: 484 YDEMISS--GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 541
Query: 371 AKAG 374
AK G
Sbjct: 542 AKGG 545
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 1/255 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ +Y + A + ++M GF C YN +LN+ G ++ +
Sbjct: 462 DTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 106 LKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ KN P+ +Y+L L A + E E+ I P W+ TL K
Sbjct: 522 MLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRR 581
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E +E++ + + + V ++S+L++Y G + ++ + + Y
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ K E +AE I + +S D N ++ + + ++ A+ + ++ G
Sbjct: 642 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Query: 285 IKPCYTTWELLTWGY 299
+ PC T+ L GY
Sbjct: 702 MAPCVVTYHTLVGGY 716
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 11/270 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL+ + + A++++ KM + GF Y+ +L Y G + + +E+
Sbjct: 498 TYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEV 557
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
T P V + A E EKAF E+K PD + ++++ ++Y K L
Sbjct: 558 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 617
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA +++ + + Y+SL+ +Y E +I K++ S K + Y V
Sbjct: 618 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I+ K G ++A+ I E D P + L+ Y + A N +
Sbjct: 678 INGFCKQGLIKEAQRILSEM-----IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ +KP T+ + Y K + ++ E
Sbjct: 733 IHHNLKPMELTYRRVVDSYCKAKRYDEARE 762
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 126/320 (39%), Gaps = 41/320 (12%)
Query: 94 GQLDKVPQMLQE--LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
GQ D V +L E L + DV Y L A + E A + F EL++ + P ++
Sbjct: 158 GQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVT 217
Query: 152 YSTLTSLYIKM------------------------------------ELPEKAATTLKEM 175
Y+ + +Y +M L ++A +++
Sbjct: 218 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDL 277
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ R V Y++LL ++ G E LR+ K+M + + Y + + + G F
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 337
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
E+A D S + N ++ AY N +++ A + ++R+ G P T+ L+
Sbjct: 338 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLI 397
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
KK + +LE ++ S P+ ++G D +L +++
Sbjct: 398 FGMLGKKSRFTAMLEMLEEM--SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSC 455
Query: 356 G-HVSTEIYNSLLRTYAKAG 374
G +S + YN+L+ Y + G
Sbjct: 456 GVELSRDTYNTLISAYGRCG 475
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFL 77
+A + + E F+ + + PD +++L Y +N ++A + + + + G
Sbjct: 574 IANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLS 633
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN ++++Y + + + ++L++LK + PDVV+YN + Q + A++
Sbjct: 634 PDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRI 693
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E+ + P ++Y TL Y +E+ +A + M + + Y ++ Y
Sbjct: 694 LSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCK 753
Query: 197 MGYKDE 202
DE
Sbjct: 754 AKRYDE 759
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL--DKVPQMLQEL 106
+A++ Y ++ K + + L + M E G + +N ++N + G++ + ++L E+
Sbjct: 260 NAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEV 319
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD++TYN ++AC+ ++ E A F ++ +PD +Y+ + S+Y + L
Sbjct: 320 RRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLS 379
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA ++E R + V+Y+S L + G ++V I ++M+ + ++ Y +
Sbjct: 380 GKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTM 439
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ + A +Y + +S D +L+ + N++E A + ++ G+
Sbjct: 440 IHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGV 499
Query: 286 KPCYTTWELLTWGYLKKG---QMEKVLECFKKA 315
KP T+ L GY K G + E+ +C ++
Sbjct: 500 KPTLRTYSALICGYAKAGKPVEAEETFDCMLRS 532
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 5/265 (1%)
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME--LPEKAATT 171
V YN + A ++ F +++ +PD +S++TL + +K P A
Sbjct: 256 VKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIEL 315
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L E+ + R + + Y++L+S + +E + ++ M++ + + Y +IS +
Sbjct: 316 LTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGR 375
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G KAE ++++ ES D N L A+ +E + +V G T
Sbjct: 376 CGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMT 435
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ + Y K+GQ + L+ ++ S R PD T + L + I+ A ++
Sbjct: 436 YNTMIHMYGKQGQNDLALQLYRDMKSSGRN--PDVITYTVLIDSLGKTNKIEEAAGMMSE 493
Query: 352 LRNAGHVST-EIYNSLLRTYAKAGK 375
+ N G T Y++L+ YAKAGK
Sbjct: 494 MLNTGVKPTLRTYSALICGYAKAGK 518
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 14/296 (4%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F+++ PD T +A++ Y + S +AE L + GF + YN L +
Sbjct: 349 NVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAF 408
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G ++KV + +E+ K D +TYN + Q + A + + ++K + +PD
Sbjct: 409 AREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDV 468
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y+ L K E+AA + EM + YS+L+ Y G E +
Sbjct: 469 ITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDC 528
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ + + Y+ ++ ++ E ++A Y E + + ++L N N+
Sbjct: 529 MLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANK 588
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+E R+V + C + +++ L KG +C+ +A +R+ + D
Sbjct: 589 VED----IGRVVRDMEEVCGMNPQAISY-ILVKG------DCYDEAAKMLRRAISD 633
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
L+ ++ G + YN +++ L++ + ++ + PD+ TYN ++
Sbjct: 315 LLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYG 374
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
AE+ F +L+ PD +SY++ + + EK +EM K K+ +
Sbjct: 375 RCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEM 434
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y++++ +Y G D L++++ M S + YT +I SL K + E+A + E
Sbjct: 435 TYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEM 494
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ R + L+ Y + AE ++ ++ G +P + ++ +L+ +
Sbjct: 495 LNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEP 554
Query: 306 EKVLECFKKAIGSVRKWVPDHRL------ITAAYNKLEEQGDI 342
++ + +K+ I +P+H L NK+E+ G +
Sbjct: 555 KRAMTFYKEMIHD--GIMPEHSLYELMLRTLGNANKVEDIGRV 595
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 124/300 (41%), Gaps = 11/300 (3%)
Query: 23 AQALQTRARENFFENLPDKMRGP----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A RAR F + D GP D+ + LL + + + + E +++++ + GF
Sbjct: 827 ASGCYERARAVFNTMMKD---GPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKI 883
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAF 137
ML+ + G + +V ++ +K P + Y + E
Sbjct: 884 SKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAML 943
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+++ PD ++++ +Y+ ++ K + +++ + Y+ L+ +Y
Sbjct: 944 SEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRD 1003
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
E L + +M ++ + Y +++S K E+AE +++E +S D
Sbjct: 1004 HRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFY 1063
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEKVLECFKK 314
+I++ Y N A+ ++ + +G++P T LL Y GQ EKVL K+
Sbjct: 1064 HIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKE 1123
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 138/339 (40%), Gaps = 40/339 (11%)
Query: 102 MLQELKKNT--SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
+L+ LK++T S ++T L + C +Q +TA K + ++ + + L
Sbjct: 661 LLELLKEHTPRSSQMITEALVVMLCKAQQ-LDTALKEYSNSRELGFTGSFTMFEALIQCC 719
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
++ EL +A+ +M + + Y S++ LY MG+ + + + +N+
Sbjct: 720 LENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNN 779
Query: 220 -AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ Y VI + +L ++KAE++ T + +V N L+ AY E A + +N
Sbjct: 780 ISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFN 839
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKV----------------------LECFKKA- 315
++ G P + L + G++E++ L+ F +A
Sbjct: 840 TMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAG 899
Query: 316 -IGSVRK---------WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYN 364
I V+K + P L L + E +L + AG I+N
Sbjct: 900 NIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWN 959
Query: 365 SLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVLKI 401
S+L+ Y + I +R+++D ++ D +T +L +
Sbjct: 960 SVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIV 998
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 164/361 (45%), Gaps = 22/361 (6%)
Query: 29 RARENF--FENLPDKMRGP--DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
RA E F F + +K P +TC++LL +++ ++ A L +M +N
Sbjct: 166 RADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFN 225
Query: 85 HMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
M+N+ G+L K + ++ P++VTYN + S E A+ +K+
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG----- 198
KI+PD +Y +L S K E+A+ +EM ++ R + V Y++L+ + N G
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 199 --YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
YKDE+L KK +S + Y +I +L ++AE + E + + D
Sbjct: 346 SAYKDEML---KKGIS----PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
NIL+ Y + A ++ ++ GIKP T+ L KK +M++ + FKK
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI- 457
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
+ +PD + A + ++ GA LL + E+ +N++++ + + GK
Sbjct: 458 -TSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 376 M 376
+
Sbjct: 517 V 517
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/328 (18%), Positives = 143/328 (43%), Gaps = 4/328 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++H Y + + A+A++ M Y +++ G+L++ ++ +E+
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P V YN + ++ + + A E+ K I P +Y++L +
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRT 377
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A +KE++++ + + Y+ L++ Y + + +M++ K YT +
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K ++A++++ + S D + N L+ + + + ++ A + +
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + G+ ++G++E+ E F + R PDH + +GDI A
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEM--KRRGIKPDHISFNTLISGYSRRGDIKDA 555
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ + + G T + YN+L++ K
Sbjct: 556 FRVRNEMLDTGFNPTVLTYNALVQGLCK 583
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+H+ +++ EAE +++++ E G + YN ++N Y K + E
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L P TY L + +N + A+ F ++ + PD I ++ L +
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNV 482
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A LK+M++ + V +++++ + G +E ++ +M K + + +
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS + G+ + A + +E N L+ + ++AE +V+KG+
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602
Query: 286 KPCYTTWELLTWGYLK 301
P TT+ L G K
Sbjct: 603 TPDDTTYFTLIEGIAK 618
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++LLH + + EA+ L +K++ G L + +N +++ + SN + ++L+++
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD VT+N + + E A + F E+K+ I PD IS++TL S Y +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + Y++L+ D + K+M+S +D Y +
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 226 ISSLVKLGEFEKAENIYDE 244
I + K+ NI DE
Sbjct: 613 IEGIAKV-------NIPDE 624
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 112/248 (45%), Gaps = 7/248 (2%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ + + A QR +A+ + +E PD + T + L++ Y + + +A
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGIS--PDAI----TYNILINGYCRCANAKKAFL 417
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
L ++M G Y +L++ ++ + + +++ + PDV+ +N +
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
S ++ + A + ++ + K+ PD ++++T+ + + E+A EM++R + + +
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
++++L+S Y+ G + R+ +M+ Y ++ L K E + AE + E
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 246 ESISGTGD 253
S T D
Sbjct: 598 VSKGMTPD 605
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 40 DKMRGPD---TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
D+M+ P T + ++ + + K EA L ++M G + +N +++ Y G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 97 DKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++ E L +P V+TYN + + + AE+ E+ + PD +Y TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 156 TSLYIKMELPEKAATT 171
K+ +P++ T
Sbjct: 613 IEGIAKVNIPDENKNT 628
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 159/354 (44%), Gaps = 16/354 (4%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G TCS LL+ ++ K + AE +++ + G + + YN ++N Y G+L+
Sbjct: 335 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394
Query: 104 QELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
++K ++ PD +TYN + A+ +E++ ++P +++TL Y +
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
EK L EM++ + N V+Y S+++ + G E + I M N Y
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + V+ G ++A + ++ +S + N+L+ N++Q+ AE N L
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 574
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLEC----FKKAIGS-VRKWVPDHRLITAAYNKLE 337
+ P ++ L +G ++K L+ K I S VR + H+LI+ L
Sbjct: 575 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY---HQLISG----LG 627
Query: 338 EQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLIIVERMQKDNVQ 390
G + E+L + V S I+N ++ Y+K G I E ++K+ +Q
Sbjct: 628 GAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNE--IKAEDLRKEMLQ 679
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 157/366 (42%), Gaps = 11/366 (3%)
Query: 34 FFENLPDKMRGP----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+L D+ R P +C+ LL + + + A+ ++ G +N +
Sbjct: 110 LLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQA 169
Query: 90 YISNGQLDKVPQMLQELKKNTSP--DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
++ G L + ML+ + ++ +P + +YN+ +A A + F E+ + + P
Sbjct: 170 CVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLP 229
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+ I+Y+T+ +IK E + +M + N + Y+ LLS G E +
Sbjct: 230 NHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 289
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+M S + Y+ + L + G+ + +++ + T +ILL
Sbjct: 290 DEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKD 349
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
++ +AE LV G+ P + L GY + G++E F + R PDH
Sbjct: 350 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM--KSRHIKPDHI 407
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERM 384
A N L + I A+ LL+ +++ G + + E +N+L+ Y + G++ I++ M
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467
Query: 385 QKDNVQ 390
Q++ ++
Sbjct: 468 QENGLK 473
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 159/360 (44%), Gaps = 18/360 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A LH + SA A AL M C +N ML S G+ + ++L+++ +
Sbjct: 457 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 516
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEK 167
P+ VTYN +A S+ + A E++ + I P+ +Y T+ S + K+ ++
Sbjct: 517 ---PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 573
Query: 168 AATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A EM K + V Y++L+ Y + G D L +M+ M A Y ++
Sbjct: 574 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 633
Query: 227 SSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+L G +A Y+ E + G G D NIL+ + ++ A + + +
Sbjct: 634 HALFMDGRGTEA---YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDI 342
G++ T+ L + KKGQ+++ + F +A VR+ + PD L A N G+I
Sbjct: 691 GVRATVVTYTALIYALSKKGQVQETDKLFDEA---VRRGIRPDLVLYNALINSHSTSGNI 747
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
D A ++ + ++ YN+L+R G++ +++ M + +Q D T L
Sbjct: 748 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 807
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+AL+ Y K A ++M E G YN +++ +G+ + ++++E+
Sbjct: 595 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 654
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K +PDV TYN+ + + + + A + F + + + ++Y+ L K ++
Sbjct: 655 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 714
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
E +R R + V Y++L++ ++ G D I +M +D Y ++
Sbjct: 715 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 774
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L LG ++A + DE D N L++ Y + ++ A N ++ KG P
Sbjct: 775 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 834
Query: 288 CYTTWELLTWGYLKKGQ 304
T+ L G K GQ
Sbjct: 835 TLLTYNALIQGLCKNGQ 851
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H+ + + EA L+E+M G YN ++N + G + K ++ + +
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 687
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ VVTY + A + + + +K F E + I PD + Y+ L + +
Sbjct: 688 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 747
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + EMEK+ + V Y++L+ +G DE ++ +M + + Y +
Sbjct: 748 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 807
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS G+ + A I +E + N L+ Q + AE+ +V GI
Sbjct: 808 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 867
Query: 286 KPCYTTWELLTWG 298
P +T+ L G
Sbjct: 868 TPDDSTYISLIEG 880
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+++ + + E + L ++ G + YN ++N + ++G +D+ +++ E+
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK +PD VTYN + + A K E+ + I PD ++Y+TL S Y
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 817
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + + Y++L+ G D+ + K+M+ +D+ Y +
Sbjct: 818 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877
Query: 226 ISSL 229
I L
Sbjct: 878 IEGL 881
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 158/375 (42%), Gaps = 38/375 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LHSY + K A L KM E G + YN ML++Y G+ D++ ++L E++
Sbjct: 219 TTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMR 278
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K D T + ++AC + + A K ELK P ++Y+++ ++ K +
Sbjct: 279 SKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYT 338
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + LKEME C + V Y+ L + Y G+ DE + + M S N YT VI
Sbjct: 339 EALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVI 398
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ K G + A ++ + + + N +LA +++ E + G
Sbjct: 399 DAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA 458
Query: 287 PCYTTWELLTWGYLKKGQ---MEKVL------------ECFKKAIGSVRK---------- 321
P TW + ++G+ + KVL + F I + +
Sbjct: 459 PNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKM 518
Query: 322 --------WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAK 372
+ P A N L +GD AE ++ +R G E Y+ LL Y+K
Sbjct: 519 YGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSK 578
Query: 373 AGKMPLIIVERMQKD 387
AG + I E+++K+
Sbjct: 579 AGNVKGI--EKVEKE 591
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
R E F+ L PD +++L + +NK ++A ++ + ECG YN +
Sbjct: 618 RGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCL 677
Query: 87 LNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
++LY+ G+ K ++L+ ++ + PDVV+YN + + + A E+ I
Sbjct: 678 MDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGI 737
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P ++Y+T S Y MEL ++A ++ M + CR + + Y L+ Y G +E +
Sbjct: 738 QPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMD 797
Query: 206 IWKKMMSLFAKMND 219
K+ L +D
Sbjct: 798 FVSKIKELDISFDD 811
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 121/269 (44%), Gaps = 7/269 (2%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVP 100
G T +++L + + EA +++++M + CP + YN + Y+ G LD+
Sbjct: 320 GTVTYNSMLQVFGKAGIYTEALSILKEMEDN---NCPPDSVTYNELAATYVRAGFLDEGM 376
Query: 101 QMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
++ + K P+ +TY + A ++ A + F +K P+ +Y+++ ++
Sbjct: 377 AVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAML 436
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K E L EM+ C NR ++++L++ + G + V ++ ++M + + +
Sbjct: 437 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDK 496
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
+ +IS+ + G + +Y E T N LL A R + AES
Sbjct: 497 DTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQD 556
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
+ TKG KP ++ LL Y K G ++ +
Sbjct: 557 MRTKGFKPNENSYSLLLHCYSKAGNVKGI 585
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 120/312 (38%), Gaps = 40/312 (12%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK DT + L+ +Y + ++ + +M + GF C YN +LN G
Sbjct: 494 PDK----DTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKA 549
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEK---------------------- 135
++Q+++ K P+ +Y+L L + + + EK
Sbjct: 550 AESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVL 609
Query: 136 -------------AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
AF +L+K PD + +++ S++ + ++ KA L + + +
Sbjct: 610 TNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQP 669
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N Y+ L+ LY G + + K + + + + Y VI + G ++A +
Sbjct: 670 NLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVL 729
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E + N L+ Y + A ++ +P T+++L GY K
Sbjct: 730 SEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKA 789
Query: 303 GQMEKVLECFKK 314
G+ E+ ++ K
Sbjct: 790 GKYEEAMDFVSK 801
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 139/340 (40%), Gaps = 20/340 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ +Y + + +A L M + G YN +L + + + V ++L E+
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N +P+ T+N LA C+ + K E+K +PD +++TL S Y +
Sbjct: 453 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSE 512
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM K Y++LL+ G + + M + K N+ Y+ +
Sbjct: 513 VDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLL 572
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN----QLEMAESFYNRLV 281
+ K G + E + E E G P ILL + N L E +++L
Sbjct: 573 LHCYSKAGNVKGIEKV--EKEIYDGHVFPSW--ILLRTLVLTNHKCRHLRGMERAFDQLQ 628
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE--- 338
G KP + + + K ++ + + + L T YN L +
Sbjct: 629 KYGYKPDLVVINSMLSMFARNKMFSKA----REMLHFIHECGLQPNLFT--YNCLMDLYV 682
Query: 339 -QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+G+ AE +L ++N+G + YN++++ + + G M
Sbjct: 683 REGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLM 722
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 1/203 (0%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP-EKAA 169
S DV Y L + A + A F ++K+ +DP ++Y+ + +Y KM ++
Sbjct: 212 SLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRIL 271
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L EM + + S+++S G DE + ++ K Y ++
Sbjct: 272 ELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVF 331
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + +A +I E E + D N L A Y+ L+ + + + +KG+ P
Sbjct: 332 GKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA 391
Query: 290 TTWELLTWGYLKKGQMEKVLECF 312
T+ + Y K G+ + L F
Sbjct: 392 ITYTTVIDAYGKAGREDDALRLF 414
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Query: 30 ARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
A E +FE LP + +T +ALLHSY K + +AE L E++ E L YN M+ L
Sbjct: 137 AAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTL 196
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+S GQ++KV +++ELK+ PD+ TYNLW+++CA+ D + + E+ D
Sbjct: 197 YMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSAND 256
Query: 149 -WISYSTLTSLYI 160
W+ Y L ++YI
Sbjct: 257 GWVRYRNLANIYI 269
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 16/326 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L+++ V+ K EAE L +M G + + YN M++ + +LD +M
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ K SPDV+T+++ + + K E+ + + + I+Y+TL + +
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----MSLFAK- 216
+ A L+EM N V ++LL N G + L ++K M M L A
Sbjct: 436 LGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495
Query: 217 -MNDAE-----YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
ND E Y +I L+ G+F +AE +Y+E D N ++ +++L
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A ++ + +KG P T+ L GY K G++ LE F + R V +
Sbjct: 556 DEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEM--GRRGIVANAITYR 613
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAG 356
+ + G+I+GA + + ++G
Sbjct: 614 TLIHGFCQVGNINGALDIFQEMISSG 639
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 159/397 (40%), Gaps = 52/397 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SA++ ++ + +A+ L +M E G YN M+N + S+G+ + ++L+E+ +
Sbjct: 252 SAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFE 311
Query: 108 KNTSPDVV-----------------------------------TYNLWLAACASQNDKET 132
+ SPDVV TYN + + QN +
Sbjct: 312 RKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDA 371
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
AE+ F + PD I++S L Y + + L EM +R N + Y++L+
Sbjct: 372 AERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIH 431
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ +G + L + ++M+S N ++ L G+ + A ++ +
Sbjct: 432 GFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDL 491
Query: 253 DPRVP-----------NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
D P NIL+ IN + AE Y + +G+ P T+ + G K
Sbjct: 492 DASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCK 551
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+ ++++ + F ++GS + + PD T N + G + + + G V+
Sbjct: 552 QSRLDEATQMF-DSMGS-KGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609
Query: 362 I-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
I Y +L+ + + G + L I + M V D T
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/330 (18%), Positives = 135/330 (40%), Gaps = 7/330 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ + K A + K+++ GF + ++ +L+ D+V + L +
Sbjct: 115 TILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE---DRVSEALHFFHQ 171
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P+V+ + + + A + + + P+ I+Y T+ KM A
Sbjct: 172 ICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 231
Query: 169 ATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
L++ME+ + + N V YS+++ G + + ++ +M N Y C+I+
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
G + +A+ + E + D ++L+ A + + AE YN ++ +GI P
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + G+ K+ +++ F + + + PD + + +D
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFY--LMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
LL + G V+ I Y +L+ + + G +
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNL 439
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 5/281 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL--DKVPQMLQEL 106
+A++ Y + + + + L++ M G + +N ++N + +G + + ++L E+
Sbjct: 258 NAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEV 317
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD++TYN ++AC+ +++ E A K + ++ + PD +Y+ + S+Y + +
Sbjct: 318 RRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMS 377
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A K++E + + V Y+SLL + G D+V I + M+ + ++ Y +
Sbjct: 378 REAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTI 437
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ + A +Y + + + D +L+ + N ++ A + ++ +
Sbjct: 438 IHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXV 497
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
KP T+ L GY K G+ + E F + S K PDH
Sbjct: 498 KPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIK--PDH 536
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 28 TRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
+R F++L K PD T ++LL+++ + + + + E M + GF K + YN
Sbjct: 377 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 436
Query: 86 MLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++++Y GQ D Q+ ++K SPD VTY + + + N + A + E+
Sbjct: 437 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAX 496
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ P ++S L Y K +A T M + + + +AYS +L + + +
Sbjct: 497 VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAM 556
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++++M+ K + A Y ++ L K E + + E + G + +IL+
Sbjct: 557 KLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV 613
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A++ Y + S EA L + + GFL + YN +L + G +DKV ++
Sbjct: 359 PDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEI 418
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++ K D +TYN + + + A + + ++K + PD ++Y+ L K
Sbjct: 419 CEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGK 478
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ ++AA + EM + +S+L+ Y G + E + M+ K +
Sbjct: 479 ANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLA 538
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
Y+ ++ L++ E KA +Y E
Sbjct: 539 YSVMLDILLRFNESGKAMKLYQE 561
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 127/315 (40%), Gaps = 11/315 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
+ + +L ++ E + + + M G+ Y M+ L ++ V M+ E+
Sbjct: 886 SITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEM 945
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD+ +N L D + + + +++ + PD +Y+TL +Y + P
Sbjct: 946 EVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRP 1005
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ + + EM + Y SL+S + + ++ +++ ++S K++ + Y +
Sbjct: 1006 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1065
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ G KAE + + ++L+ +Y Q E AE + L +G+
Sbjct: 1066 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1125
Query: 286 KPCYTTWELLTWGYLKKGQ----MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ + YLK G ++K++E K + PDHR+ T
Sbjct: 1126 PLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLE------PDHRIWTCFVRAASLSQH 1179
Query: 342 IDGAEHLLVTLRNAG 356
A LL LR+ G
Sbjct: 1180 TSEAIVLLKALRDTG 1194
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 117/264 (44%), Gaps = 5/264 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
L+ ++ G + YN +++ L++ ++ ++ PD+ TYN ++
Sbjct: 313 LLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYG 372
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
A + F +L+ PD ++Y++L + + +K ++M K K+ +
Sbjct: 373 RCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEM 432
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDE 244
Y++++ +Y G D +++ M L + DA YT +I SL K ++A + E
Sbjct: 433 TYNTIIHMYGKRGQHDLAFQLYSD-MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSE 491
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ R + L+ Y + AE ++ ++ GIKP + + ++ L+ +
Sbjct: 492 MLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 551
Query: 305 MEKVLECFKKAIGSVRKWVPDHRL 328
K ++ +++ + + + PDH L
Sbjct: 552 SGKAMKLYQEMV--LHSFKPDHAL 573
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 123/299 (41%), Gaps = 11/299 (3%)
Query: 23 AQALQTRARENFFENLPDKMRGP----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A RAR F + D GP D+ + L+ + + + + E +++++ + GF
Sbjct: 826 ASGCYERARAIFNTMMRD---GPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKI 882
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAF 137
ML+ + G + +V ++ Q +K P + Y + + A E
Sbjct: 883 SKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMV 942
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++ PD ++++ LY + +K + +++ + + Y++L+ +Y
Sbjct: 943 SEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRD 1002
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+E L + +M + + Y +IS+ KL E+AE +++ S D
Sbjct: 1003 RRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFY 1062
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEKVLECFK 313
+I++ + N AE + G++P T LL Y GQ EKVL+ K
Sbjct: 1063 HIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLK 1121
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKM--SECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
DT +L+ ++ + + +AE L E + EC + Y+ M+ ++ ++G K ++L
Sbjct: 1025 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSF--YHIMMKMFRNSGNHSKAEKLL 1082
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+K+ P + T +L + + + E AEK LK + + YS++ Y+K
Sbjct: 1083 GVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKN 1142
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------MSLF 214
A L EM+K + ++ + + + E + + K + + L
Sbjct: 1143 GDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLL 1202
Query: 215 AKMNDAEYTCVISSLVKLGEFE 236
+ +D+ + V + L KLG E
Sbjct: 1203 TEKSDSLVSEVDNCLEKLGPLE 1224
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 6/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + G L+KV ++ E+ N PD VTY+ ++A ++A + F E+
Sbjct: 201 YNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEM 260
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+TL +Y K++ EKA +KEM+ + C Y+ + G
Sbjct: 261 KENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRV 320
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D+ R++ M+ K + +I+ L K+G E ++ + ES + N +
Sbjct: 321 DDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTV 380
Query: 261 LAAYIN-RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ A + A S++ ++ GI P T+ +L G+ K ++EK L ++
Sbjct: 381 IKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEM--DE 438
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + N L + + A L + L+ N GH S +Y +++ + K G++
Sbjct: 439 KGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRL 496
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ + + + +A L+E+M E GF CP Y ++N + + ++ EL
Sbjct: 412 TYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLEL 471
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N Y + + A F E++K PD +Y+ L S ++ +
Sbjct: 472 KENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMI 531
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + L+ M++ C + +++ +L+ G D + ++ KM S K + Y V
Sbjct: 532 DEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTV 591
Query: 226 ISSLVKLGEFEKAENIYDE 244
+ L G FE+A + E
Sbjct: 592 LGCLSHAGLFEEAAKLMRE 610
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 3/192 (1%)
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
S + L K ++ KA + +++ R C+ Y+S++ + G+ ++V I+ +M +
Sbjct: 167 SEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCN 226
Query: 213 LFAKMND-AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
D Y+ +IS+ KLG ++ A ++DE + ++ LL Y +++E
Sbjct: 227 DGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVE 286
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A + KG T+ G K G+++ F I K PD LI +
Sbjct: 287 KALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCK--PDVVLINS 344
Query: 332 AYNKLEEQGDID 343
N L + G ++
Sbjct: 345 LINILGKVGRLE 356
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 75/177 (42%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+P TY++ + N E A E+ + P +Y +L + K++ E A
Sbjct: 407 APSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANE 466
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
E+++ + Y+ ++ + G E + ++ +M L +K + Y ++S +V
Sbjct: 467 LFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMV 526
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ G ++A+++ + + D NI+L + A + ++ + IKP
Sbjct: 527 RAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKP 583
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 2/288 (0%)
Query: 29 RARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+A++ FFE + + T + L+H +N + + EKM E G YN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
N + +G+ ++ E++ + S ++VTYN + + A K ++K I+
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ I+Y+TL + + KA + ++++ R + V Y+ L+S + G ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
K+M K + YT +I + ++ EKA + E + T D ++L+ +
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ Q+ A + +V K ++P + + GY K+G + L F++
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 148/354 (41%), Gaps = 7/354 (1%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
++++YVQ++ + + +M + GF+ +N++L + + ++ + E K
Sbjct: 99 VMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK 158
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
DV ++ + + C + E + +EL++ P+ + Y+TL K EKA
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM K N Y+ L+ G K + +++KM N Y CV++
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQH 278
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + A ++DE + + N L+ + A +++ + GI P
Sbjct: 279 CKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNL 338
Query: 290 TTWELLTWGYLKKGQMEKVLE-CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L G+ G++ K L C + + + ++ + + K +GD GA +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCK---KGDTSGAGKV 395
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLIIVER--MQKDNVQMDAETQKVL 399
+ + G ++I Y L+ T+A+ M I R M++ + D T VL
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 11/256 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + K+ EA +M++M G + YN +++ + G+L K + ++L
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + SP +VTYN+ ++ + D A K E+++ I P I+Y+ L + +M+
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNM 424
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA ME+ + YS L+ + G +E R++K M++ + N Y +
Sbjct: 425 EKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTM 484
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
+ K G +A ++ E E PN+ ++ + + AE ++
Sbjct: 485 VLGYCKEGSSYRALRLFREMEE-----KELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539
Query: 281 VTKGIKPCYTTWELLT 296
+ GI P + L++
Sbjct: 540 IDTGIDPSDSILNLIS 555
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 5/281 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL--DKVPQMLQEL 106
+A++ Y + + + + L++ M G + +N ++N + +G + + ++L E+
Sbjct: 226 NAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEV 285
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD++TYN ++AC+ +++ E A K + ++ + PD +Y+ + S+Y + +
Sbjct: 286 RRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMS 345
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A K++E + + V Y+SLL + G D+V I + M+ + ++ Y +
Sbjct: 346 REAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTI 405
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ + A +Y + + + D +L+ + N ++ A + ++ +
Sbjct: 406 IHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARV 465
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
KP T+ L GY K G+ + E F + S K PDH
Sbjct: 466 KPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIK--PDH 504
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 28 TRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
+R F++L K PD T ++LL+++ + + + + E M + GF K + YN
Sbjct: 345 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 404
Query: 86 MLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++++Y GQ D Q+ ++K SPD VTY + + + N + A + E+ +
Sbjct: 405 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAR 464
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ P ++S L Y K +A T M + + + +AYS +L + + +
Sbjct: 465 VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAM 524
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++++M+ K + A Y ++ L K E + + E + G + +IL+
Sbjct: 525 KLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV 581
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A++ Y + S EA L + + GFL + YN +L + G +DKV ++
Sbjct: 327 PDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEI 386
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++ K D +TYN + + + A + + ++K + PD ++Y+ L K
Sbjct: 387 CEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGK 446
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ ++AA + EM + +S+L+ Y G + E + M+ K +
Sbjct: 447 ANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLA 506
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
Y+ ++ L++ E KA +Y E
Sbjct: 507 YSVMLDILLRFNESGKAMKLYQE 529
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 127/315 (40%), Gaps = 11/315 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
+ + +L ++ E + + + M G+ Y M+ L ++ V M+ E+
Sbjct: 854 SITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEM 913
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD+ +N L D + + + +++ + PD +Y+TL +Y + P
Sbjct: 914 EVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRP 973
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ + + EM + Y SL+S + + ++ +++ ++S K++ + Y +
Sbjct: 974 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1033
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ G KAE + + ++L+ +Y Q E AE + L +G+
Sbjct: 1034 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1093
Query: 286 KPCYTTWELLTWGYLKKGQ----MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ + YLK G ++K++E K + PDHR+ T
Sbjct: 1094 PLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLE------PDHRIWTCFVRAASLSQH 1147
Query: 342 IDGAEHLLVTLRNAG 356
A LL LR+ G
Sbjct: 1148 TSEAIVLLKALRDTG 1162
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 124/299 (41%), Gaps = 11/299 (3%)
Query: 23 AQALQTRARENFFENLPDKMRGP----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A RAR F + D GP D+ + L+ + + + + E +++++ + GF
Sbjct: 794 ASGCYERARAIFNTMMRD---GPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKI 850
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAF 137
ML+ + G + +V ++ Q +K P + Y + + A E
Sbjct: 851 SKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMV 910
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++ + PD ++++ LY + +K + +++ + + Y++L+ +Y
Sbjct: 911 SEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRD 970
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+E L + +M + + Y +IS+ KL E+AE +++ S D
Sbjct: 971 RRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFY 1030
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEKVLECFK 313
+I++ + N AE + G++P T LL Y GQ EKVL+ K
Sbjct: 1031 HIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLK 1089
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 117/264 (44%), Gaps = 5/264 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
L+ ++ G + YN +++ L++ ++ ++ PD+ TYN ++
Sbjct: 281 LLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYG 340
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
A + F +L+ PD ++Y++L + + +K ++M K K+ +
Sbjct: 341 RCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEM 400
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDE 244
Y++++ +Y G D +++ M L + DA YT +I SL K ++A + E
Sbjct: 401 TYNTIIHMYGKRGQHDLAFQLYSD-MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSE 459
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ R + L+ Y + AE ++ ++ GIKP + + ++ L+ +
Sbjct: 460 MLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 519
Query: 305 MEKVLECFKKAIGSVRKWVPDHRL 328
K ++ +++ + + + PDH L
Sbjct: 520 SGKAMKLYQEMV--LHSFKPDHAL 541
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKM--SECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
DT +L+ ++ + + +AE L E + EC + Y+ M+ ++ ++G K ++L
Sbjct: 993 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSF--YHIMMKMFRNSGNHSKAEKLL 1050
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+K+ P + T +L + + + E AEK LK + + YS++ Y+K
Sbjct: 1051 GVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKN 1110
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------MSLF 214
A L EM+K + ++ + + + E + + K + + L
Sbjct: 1111 GDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLL 1170
Query: 215 AKMNDAEYTCVISSLVKLGEFE 236
+ +D+ + V + L KLG E
Sbjct: 1171 TEKSDSLVSEVDNCLEKLGPLE 1192
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 153/340 (45%), Gaps = 21/340 (6%)
Query: 44 GPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
P+ S AL+ +Y + + AEA+ +M + G Y +L ++ + + +
Sbjct: 168 APNVVSQTALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEE 227
Query: 102 MLQELKKNTS----PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ L + + PD +N+ + E A K F ++ + I ++Y++L S
Sbjct: 228 LFDNLLNDENSPLKPDQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLMS 287
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ + + +M++ R + V+Y+ L+S Y ++E L ++++M+ +
Sbjct: 288 FETNYK---EVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRP 344
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEM 272
Y ++ + G E+A+ ++ S D P++ +L+AYIN + +E
Sbjct: 345 TRKAYNILLDAFSISGMVEQAQTVFK-----SMRRDRYFPDLCSYTTMLSAYINADDMEG 399
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
AE F+ RL+ G +P T+ L GY K +E V++ +++ + +R + ++T
Sbjct: 400 AEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEML--MRGIKANQTILTTI 457
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAK 372
+ + GD D A H + + G + ++L + AK
Sbjct: 458 MDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSLAK 497
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 7/270 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGP---DTCSALLHSYVQNKKSA--EAEALMEKMSECGFL 77
Q + R E F+NL + P D + Y+ K + +A +M+E G
Sbjct: 217 VQGNKFREAEELFDNLLNDENSPLKPDQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQ 276
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ + YN +++ + ++ + +Q + + PDVV+Y L ++A +E A F
Sbjct: 277 QTTVTYNSLMSFETNYKEVSNIYDQMQ--RADLRPDVVSYALLVSAYGKARREEEALAVF 334
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+ I P +Y+ L + + E+A T K M + + +Y+++LS Y N
Sbjct: 335 EEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINA 394
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+ + +K+++ + N Y +I K+ + E Y+E + +
Sbjct: 395 DDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTIL 454
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKP 287
++ AY + A ++ + + GI P
Sbjct: 455 TTIMDAYGKSGDFDSAVHWFKEMESNGIPP 484
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 153/343 (44%), Gaps = 16/343 (4%)
Query: 28 TRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
+ A++ E L K PD T +AL++++V+ K EAE L ++M G + + Y+
Sbjct: 272 SEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSS 331
Query: 86 MLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
M++ + +LD M + K SPD++T+N +A + K E+ +
Sbjct: 332 MIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ + I+Y+TL + ++ A L+EM N V ++LL + G + L
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451
Query: 205 RIWKKM----MSLFAK--MNDAE-----YTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
++K M M + A N E Y +IS L+ G+F +AE +Y+E D
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
N ++ +++L+ A ++ + +K P T+ L GY K G+++ LE F
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+ R V + + + G+I+GA + + +G
Sbjct: 572 EM--GRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASG 612
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 177/434 (40%), Gaps = 65/434 (14%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV +A AL R E+ + P+++ T ++ + + A L+ KM E +K
Sbjct: 194 RVVEAVALLDRMLEDGLQ--PNQI----TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIK 247
Query: 79 C-----PLPY-NHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDK 130
PL M+N + S+G+ + Q+LQE+ +K SPDVVTYN + A +
Sbjct: 248 PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKF 307
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
AE+ + E+ I P I+YS++ + K + A M + C + + +++L
Sbjct: 308 FEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTL 367
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES--- 247
++ Y D+ +++ +M N YT +I ++G+ A+++ E S
Sbjct: 368 IAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGV 427
Query: 248 ----------ISGTGD-------------------------------PRVP--NILLAAY 264
+ G D P V NIL++
Sbjct: 428 CPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGL 487
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
IN + AE Y + +GI P T+ + G K+ ++++ + F ++GS + + P
Sbjct: 488 INEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMF-DSMGS-KSFSP 545
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIV 381
+ T N + G +D L + G V+ I Y +L+ + K G + L I
Sbjct: 546 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIF 605
Query: 382 ERMQKDNVQMDAET 395
+ M V D T
Sbjct: 606 QEMMASGVYPDTIT 619
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 125/294 (42%), Gaps = 24/294 (8%)
Query: 98 KVPQMLQELKKNT----SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
K+P L K T P VVT++ L ++ A F ++ K P+ ++++
Sbjct: 128 KLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFT 183
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
TL + + +A L M + + N++ Y +++ MG L + +KM +
Sbjct: 184 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 243
Query: 214 -FAKMNDAEY-----TCVISSLVKLGEFEKAENIYDE-WESISGTGDPRVPNILLAAYIN 266
K N + TC+I+ G + +A+ + E E + D N L+ A++
Sbjct: 244 SHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVK 303
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD- 325
+ AE Y+ ++ +GI P T+ + G+ K+ +++ F + + + PD
Sbjct: 304 EGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFY--LMATKGCSPDI 361
Query: 326 --HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ A Y + + +D LL + AG V+ I Y +L+ + + G +
Sbjct: 362 ITFNTLIAGYCRAKR---VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 14/349 (4%)
Query: 34 FFENLPDKMRGPDTC----SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FFE+L K RG C +ALL + + EA ++++M + G + YN +
Sbjct: 266 FFEDL--KARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGT 323
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G ++ + L + K P+ TYN + A + + A F ++KK+ P+
Sbjct: 324 YARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPN 383
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + + K L EM + C NRV ++++L++ G +D V R+ +
Sbjct: 384 VNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 443
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M S +++ Y +I++ + G A +Y+E S N LL +
Sbjct: 444 GMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQG 503
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV--RKWVPDH 326
A+S +++ TKG KP ++ LL Y K G + + K+ G WV
Sbjct: 504 DWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILR 563
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
L+ A + K G G E ++ G+ I+NS+L YAK G
Sbjct: 564 TLVIANF-KCRRLG---GIEKAFQEVKARGYNPDLVIFNSMLSMYAKNG 608
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 146/367 (39%), Gaps = 36/367 (9%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+ + + A L ++ G + YN +L++Y G+ ++ +L E++
Sbjct: 177 TTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMR 236
Query: 108 K-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD T + +AAC + A F +LK P ++Y+ L ++ K
Sbjct: 237 AAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYT 296
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LKEME+ C+ + V Y+ L Y G+ +E + M S N Y V+
Sbjct: 297 EALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVM 356
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
++ +G+ ++A ++D+ + + N +L +++ + + G
Sbjct: 357 TAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCT 416
Query: 287 PCYTTWELLTWGYLKKGQ---MEKVLECFKK---------------AIG----------- 317
P TW + K+G + +VLE K A G
Sbjct: 417 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 476
Query: 318 ----SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAK 372
+ + P A N L QGD A+ ++ +R G + + Y+ LL+ YAK
Sbjct: 477 YNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAK 536
Query: 373 AGKMPLI 379
G + I
Sbjct: 537 GGNIAGI 543
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 1/255 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ +Y + A + +M+ GF C YN +LN+ G ++ +
Sbjct: 455 DTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSK 514
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ K P+ +Y+L L A + + E+ + P W+ TL K
Sbjct: 515 MRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRR 574
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+E++ R + V ++S+LS+Y G +V I+ + + Y
Sbjct: 575 LGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNS 634
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ K E +AE I ++ +S D N ++ + + ++ A+ + ++ G
Sbjct: 635 LMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 694
Query: 285 IKPCYTTWELLTWGY 299
+ PC T+ L GY
Sbjct: 695 MAPCVVTYHTLVGGY 709
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 172/424 (40%), Gaps = 38/424 (8%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFE-------NLPDKMRGPD--TCSALLHSYVQN 58
G Q A +Y + T AR F+E + K P+ T + ++ +Y
Sbjct: 309 GCQPDAVTYNELAG------TYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNI 362
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTY 117
K EA AL ++M + G + YN +L + + + +ML E+ ++ +P+ VT+
Sbjct: 363 GKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 422
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
N LA C + ++ + +K ++ +Y+TL + Y + A EM
Sbjct: 423 NTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 482
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
Y++LL++ + G I KM + K ND Y+ ++ K G
Sbjct: 483 AGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAG 542
Query: 238 AENIYDEWESISGTGDPR--VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ I E E GT P + L+ A +L E + + +G P + +
Sbjct: 543 IDAI--EKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSM 600
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ----GDIDGAEHLLVT 351
Y K G KV E F S+++ LIT YN L + + AE +L
Sbjct: 601 LSMYAKNGMYSKVTEIFD----SIKQSGLSPDLIT--YNSLMDMYAKCSESWEAEKILNQ 654
Query: 352 LRNAGHVSTEI--YNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPVSE 409
L+++ V ++ YN+++ + K G +++ Q+ +M A+ +T V
Sbjct: 655 LKSS-QVKPDVVSYNTVINGFCKQG-----LIKEAQRILSEMIADGMAPCVVTYHTLVGG 708
Query: 410 VSSI 413
+S+
Sbjct: 709 YASL 712
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 11/267 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL+ + + A++++ KM GF Y+ +L Y G + + + +E+
Sbjct: 491 TYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEV 550
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
T P V + A EKAF E+K +PD + ++++ S+Y K +
Sbjct: 551 YGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMY 610
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
K +++ + + Y+SL+ +Y E +I ++ S K + Y V
Sbjct: 611 SKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTV 670
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I+ K G ++A+ I E D P + L+ Y + A N +
Sbjct: 671 INGFCKQGLIKEAQRILSEM-----IADGMAPCVVTYHTLVGGYASLEMFSEAREVINYM 725
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ +KP T+ + Y K + E+
Sbjct: 726 IQHNLKPMELTYRRVVDSYCKAKRFEE 752
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 124/320 (38%), Gaps = 41/320 (12%)
Query: 94 GQLDKVPQMLQE--LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
GQ D V +L E L + DV Y L A + E A + F EL++ + P ++
Sbjct: 151 GQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVT 210
Query: 152 YSTLTSLYIKM------------------------------------ELPEKAATTLKEM 175
Y+ + +Y +M L ++A +++
Sbjct: 211 YNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDL 270
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ R V Y++LL ++ G E LR+ K+M + + Y + + + G +
Sbjct: 271 KARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFY 330
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
E+A D S + N ++ AY N +++ A + ++++ G P T+ +
Sbjct: 331 EEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFI 390
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
KK + +LE + S P+ ++G D +L +++
Sbjct: 391 LGMLGKKSRFTVMLEMLGEM--SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSC 448
Query: 356 G-HVSTEIYNSLLRTYAKAG 374
G +S + YN+L+ Y + G
Sbjct: 449 GVELSRDTYNTLIAAYGRCG 468
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 32 ENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F+ + + PD +++L Y +N ++ + + + + G + YN ++++
Sbjct: 579 EKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDM 638
Query: 90 YISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y + + ++L +LK + PDVV+YN + Q + A++ E+ + P
Sbjct: 639 YAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 698
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
++Y TL Y +E+ +A + M + + + Y ++ Y
Sbjct: 699 VVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSY 744
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 168/387 (43%), Gaps = 10/387 (2%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+N+ R P +C++LL++ V+N ++ A + ++M G + + M+N +
Sbjct: 179 FDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCK 238
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G++D+ +++++ P++VTY+ + S D E A+ + + + + ++
Sbjct: 239 DGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT 298
Query: 152 YSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+ L Y K ++A L+ M E+ + AY L+ Y G D+ +R+ +M
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ L K N +I+ K GE +AE + + D N LL Y
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A + ++++ +GI+P T+ L G + G + L+ + + R PD +
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMK--RGVAPDEVGYS 476
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKD 387
+ L + + +GA L + G + I +N+++ K GKM I ++M+
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536
Query: 388 NVQMDAETQKVLKITSEMPVSEVSSIF 414
D T + L I S V F
Sbjct: 537 GCSPDGITYRTL-IDGYCKASNVGQAF 562
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 2/262 (0%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P +L YV+ + A + + M +CG + N +LN + NG+ + Q
Sbjct: 156 PTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQ 215
Query: 105 E-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ ++ PDV ++ + A + A +++ ++P+ ++Y +L + Y+ +
Sbjct: 216 QMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLG 275
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE-Y 222
E A LK M ++ +N V Y+ L+ Y DE ++ + M A + D Y
Sbjct: 276 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 335
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + G+ + A + DE + + + N L+ Y R ++ AE R+V
Sbjct: 336 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 395
Query: 283 KGIKPCYTTWELLTWGYLKKGQ 304
+KP ++ L GY ++G
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGH 417
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ----LDKVPQML 103
C++L++ Y + + EAE ++ +M + YN +L+ Y G + +ML
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
QE P V+TYN L + A + + + K + PD + YSTL KME
Sbjct: 430 QE---GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 486
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
E A+T K++ R K+R+ +++++S MG E I+ KM L + Y
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I K +A + E + + N L++ +L + +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 606
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECF 312
G+ P T+ L G+ K+G ++K +
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSY 635
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 5/267 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSE-CGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + L+ Y + K EAE ++ M E + Y +++ Y G++D ++L E
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ ++ N + + + AE + + PD SY+TL Y +
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A +M + + Y++LL +G D+ L+IW MM ++ Y+
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L K+ FE A ++ + + T N +++ ++ AE ++++ G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537
Query: 285 IKPCYTTWELLTWGYLKK---GQMEKV 308
P T+ L GY K GQ KV
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKV 564
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 139/362 (38%), Gaps = 36/362 (9%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S LL + + A L + + GF K + +N M++ G++ + ++ ++K
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
SPD +TY + ++ A K +++ I P Y++L S K +
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 595
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
L EM R N V Y +L+ + G D+ + +M N + ++S
Sbjct: 596 VTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 655
Query: 228 SLVKLGE----------------------FEKAENIYDEWESISGTGDPR---------- 255
L +LG F K++ Y + I+ + D
Sbjct: 656 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNI 715
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
V NI +A +++ A F++ L KG P T+ L GY G +++ +
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ R VP+ A N L + ++D A+ L L G + YN+L+ Y K G
Sbjct: 776 LR--RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 833
Query: 375 KM 376
M
Sbjct: 834 NM 835
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVV 115
+ K +A +S GF+ Y +++ Y + G +D+ ++ E L++ P++V
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TYN + + + A++ F +L + + P+ ++Y+TL Y K+ + A +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + V YS+L++ G + +++ +M+ EY ++ ++ GE
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEM 905
Query: 236 EKAENIYD 243
+K +YD
Sbjct: 906 QKIHKLYD 913
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 149/382 (39%), Gaps = 40/382 (10%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F+ + D PD T L+ Y + +A + M YN +++
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ +L +V +L E+ + +P++VTY + + + A ++ E+ + + +
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646
Query: 149 WISYSTLTS-LY-------------------------------IKMELPEKAATTLKEME 176
I ST+ S LY I+ +K A +L E
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 706
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND-AEYTCVISSLVKLGEF 235
K N + Y+ ++ G D+ R + M+SL + D Y +I G
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS-MLSLKGFVPDNFTYCTLIHGYSAAGNV 765
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
++A + DE + N L+ ++ A+ +++L KG+ P T+ L
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
GY K G M+ + K I P +A N L + GDI+ + LL + A
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEE--GISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883
Query: 356 GHVSTEI-YNSLLRTYAKAGKM 376
G S I Y +L++ Y ++G+M
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEM 905
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 126/311 (40%), Gaps = 23/311 (7%)
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAE 134
F P ++ +L +Y+ G + + K P + + N L + TA
Sbjct: 152 FAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 211
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ ++ + I PD S + + + K ++AA +K+ME N V Y SL++ Y
Sbjct: 212 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGD 253
++G + + K M N YT +I K + ++AE + E + D
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 331
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
R +L+ Y +++ A + ++ G+K L GY K+G++
Sbjct: 332 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH------- 384
Query: 314 KAIGSVRKWV-----PDHRLITAAYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI-Y 363
+A G + + V PD + +YN L + +G A +L + G T + Y
Sbjct: 385 EAEGVITRMVDWNLKPD----SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440
Query: 364 NSLLRTYAKAG 374
N+LL+ + G
Sbjct: 441 NTLLKGLCRVG 451
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF L K PD T L+H Y EA L ++M G + + YN ++N
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ +D+ ++ +L +K P+VVTYN + + + A K ++ + I P +
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+YS L + K E++ L +M K + Y +L+ Y G ++ +++ M
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 112/294 (38%), Gaps = 68/294 (23%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFL-------------------------KCP-- 80
CS ++ + + EA LM+KM + GF C
Sbjct: 650 CSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 709
Query: 81 -LPYNHMLNLYISN----GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAE 134
LP N + N+ I+ G++D + L K PD TY + ++ + + A
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ E+ + + P+ ++Y+ L + K E ++A ++ ++ N V Y++L+ Y
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 829
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+G D ++ KM+ + Y+ +I+ L K G+ E++ +
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKL------------- 876
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
N+++ G+ + L GY++ G+M+K+
Sbjct: 877 ----------------------LNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKI 908
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 152/368 (41%), Gaps = 17/368 (4%)
Query: 18 QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+R+ QA A+ R++ E P+ + T ++L+ +N + A+ L E M
Sbjct: 93 KRLDQALAILHEMRDHGCE--PNVV----TYNSLIDGLCKNNEPDRAQELFEHMKSVECS 146
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQEL--------KKNTSPDVVTYNLWLAACASQND 129
+ YN +L+ G+L++ + QE+ SP+V+TY++ + N
Sbjct: 147 PSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANR 206
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A + +K PD I+Y+ L K A L+EM C N V Y+S
Sbjct: 207 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 266
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
LL + L + + M N Y +I L K+G + A + +
Sbjct: 267 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 326
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
GT D + N+L+ +Q++ + + R V+ GIKP T+ + +G + ++++
Sbjct: 327 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA- 385
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
C R PD L + + L + G +D A L + G Y++L+
Sbjct: 386 -CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID 444
Query: 369 TYAKAGKM 376
KAG++
Sbjct: 445 GLCKAGRV 452
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 8/308 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
L+ + + +A A++ M + G + YN ++N Q+D+ +L+ +
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PDVVTY+ + N + A + L +K PD I YSTL K ++
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M C + V YS+L+ G DE + +M+ + + Y +I
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA----ESFYNRLVTK 283
L L ++A + +E E + NIL+ +++ A E R V
Sbjct: 480 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAA 539
Query: 284 GIKPCYT-TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G T + L G K G++ + L+ F++ I + +PDH + L++ D+
Sbjct: 540 GGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN--GVIPDHITYSILLEGLKKSKDL 597
Query: 343 DGAEHLLV 350
HL++
Sbjct: 598 HELRHLVL 605
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 123/316 (38%), Gaps = 22/316 (6%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
CS L+ + K+S +A M G + + Y +L+ +LD+ +L E++
Sbjct: 47 CSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMR 106
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ P+VVTYN + N+ + A++ F +K + P ++Y+TL + E
Sbjct: 107 DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 166
Query: 167 KAATTLKEMEKR-------TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+A +EM R C N + YS L+ + + + + M + +
Sbjct: 167 RAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV 226
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR-VPNI-----LLAAYINRNQLEMA 273
YT ++ L K + A WE + D VPN+ LL ++ A
Sbjct: 227 ITYTILVDGLCKESKVAAA------WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 280
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
+ + +G P T+ L G K G+++ I + PD +
Sbjct: 281 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID--KGGTPDLMIYNMLI 338
Query: 334 NKLEEQGDIDGAEHLL 349
N L + +D + LL
Sbjct: 339 NGLCKADQVDESIALL 354
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 14/262 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +L + G++D+ + E++ KN P+V ++ + A + F ++
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I D + Y+ L S K + ++A L EM C N V Y+SL+ D
Sbjct: 72 GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE-WESISGTGDPRV-PN- 258
+++ M S+ + Y ++ L + G+ E+A ++ E + S D R PN
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191
Query: 259 ----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+L+ N++ A + +G P T+ +L G K+ ++ E ++
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251
Query: 315 AIGSVRKWVPDHRLITAAYNKL 336
+ + VP+ L+T YN L
Sbjct: 252 MLDA--GCVPN--LVT--YNSL 267
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 10/270 (3%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PDV TY L + + A++ F E++ + P+ S L K + A
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ M+ + V Y++LLS D+ L I +M + N Y +I L K
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK-------G 284
E ++A+ +++ +S+ + N LL +LE A + + ++ +
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P T+ +L G K ++ + +E + R PD T + L ++ +
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESM--KARGCSPDVITYTILVDGLCKESKVAA 244
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
A +L + +AG V + YNSLL +A
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRA 274
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 154/357 (43%), Gaps = 6/357 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
+A Q E F + +A++ Y ++ + +A L++ M + G +
Sbjct: 199 GRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVS 258
Query: 83 YNHMLNLYISNGQLDK--VPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLE 139
+N ++N +G L +L E++++ PDV+TYN ++AC+ ++ E A F E
Sbjct: 259 FNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEE 318
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ ++ PD +Y+ + S++ + E+A E+ ++ + V Y+SLL + G
Sbjct: 319 MIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGN 378
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D+V ++++ K N+ Y +I K+G + A +YDE ++ T D +
Sbjct: 379 VDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTV 438
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
++ + +++ A + G+KP + L Y K G+ + F I S
Sbjct: 439 MIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASG 498
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGK 375
K PD + G+ + L T+ N + ++Y LL AK K
Sbjct: 499 VK--PDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDK 553
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 160/381 (41%), Gaps = 42/381 (11%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L +K PD T ++LL+++ + + E E++ + GF K + YN M+++
Sbjct: 348 ERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHM 407
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+LD + E++ +PD VTY + + + + A K ++ + P
Sbjct: 408 YGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPT 467
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++S L Y K A T M + +R+AY +L ++ G +++LR+++
Sbjct: 468 LVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYR 527
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
MM+ + +D Y ++ +L K + E+ E I + E + + IL+ A
Sbjct: 528 TMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSLGVISTILIKARC--- 584
Query: 269 QLEMAESFYNRLVTKGIKP-CYTTWELLTWGYLKKGQME--KVLECFKKAIGSVRKWVPD 325
+ + +G KP + W ++ + + E +LEC + + S + + +
Sbjct: 585 -VSQGGKLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLECIRDHVSSSQDLISE 643
Query: 326 HRLI--------TAAYNKLEEQ-------GDIDGAEHLLVTLRNAG-------------- 356
+I +AY + ++ + + EHL+ L A
Sbjct: 644 CSIILLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQF 703
Query: 357 ---HVSTEIYNSLLRTYAKAG 374
S IY S++ TY K G
Sbjct: 704 IGIEASKNIYESIISTYCKLG 724
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
+L ++ + E + M G+L Y M +L + + V M+ E++
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD+ +N L + + + + + + + ++PD +Y+TL +Y + PE+
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGF 975
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T L EM KR +Y SLL+ +++ +++++M S ++N + Y ++
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G KAEN+ + +IL+ +Y Q AE+ N L + ++
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVST 1095
Query: 290 TTWELLTWGYLKKGQ----MEKVLECFKKAIGSVRKWVPDHRLITA---AYNKLEEQGDI 342
+ + YLK G ++K+LE + + PDH++ T A + E+ D
Sbjct: 1096 LPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVE------PDHQVWTCFIRAASLCEQTAD- 1148
Query: 343 DGAEHLLVTLRNAG 356
A LL +L++ G
Sbjct: 1149 --AILLLKSLQDCG 1160
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L++A + LE A + + ++ +P T+ + + + G+ E+ F + +
Sbjct: 297 NTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVE 356
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ ++PD + ++G++D EH L AG EI YN+++ Y K G++
Sbjct: 357 --KGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 377 PLII--VERMQKDNVQMDAETQKVL 399
L + + M+ DA T V+
Sbjct: 415 DLAVGLYDEMRAVGCTPDAVTYTVM 439
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 137/331 (41%), Gaps = 13/331 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SAL+ +Y + + A+AE + M G L Y ML+++ +G+ +K+ ++ + +
Sbjct: 472 SALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMN 531
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N PD Y + L A A ++ E E+ +++ +S ++++ IK +
Sbjct: 532 DNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLC----QMSLGVISTILIKARCVSQ 587
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
LK+ + + + + S+++ Y +E L + + + + D C I
Sbjct: 588 GGKLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLECIRDHVSSSQDLISECSII 647
Query: 228 SLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L + A Y + + G + + L+ + A + + GI+
Sbjct: 648 LLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQFIGIE 707
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI---D 343
+E + Y K G E A+ S +P + +++ +E G+I
Sbjct: 708 ASKNIYESIISTYCKLGFPETAHGLMDDALQS---GIPLN-ILSCRVIIIEAYGNIKLWQ 763
Query: 344 GAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
AE L+ LR A + I+N+L+ YA++G
Sbjct: 764 QAEILVKGLRQASGIDRRIWNALIHAYAESG 794
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A++ + + + A+ ++++M GF + +N M+ + G++D ++ +EL K
Sbjct: 48 NAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLK 107
Query: 109 --NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
N P ++TY + + A + + A K E+ ++PD +Y+ +T K +
Sbjct: 108 DNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVD 167
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A ++ + R C+ + + Y+ LL N G DE + ++ S + N Y+ +I
Sbjct: 168 RAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILI 227
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
SSL + G+ E++ N+ + T D + L+AA+ +L+MA F + ++ G
Sbjct: 228 SSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFL 287
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKK 314
P + + K G + +E F K
Sbjct: 288 PDIVNYNTIMAALCKNGNGDHAVEIFGK 315
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 125/287 (43%), Gaps = 4/287 (1%)
Query: 90 YISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ +DK +++ L+K+ PDV YN ++ N E+A+ +K+ PD
Sbjct: 20 FFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDV 79
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEK-RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++++ + + + A +E+ K C+ + Y+ L+ Y G DE L++
Sbjct: 80 VTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLD 139
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M+S + + Y + L K G+ ++A S D NILL A +N+
Sbjct: 140 EMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQG 199
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ + E + + + ++G +P T+ +L + G++E+ + K + + PD
Sbjct: 200 KWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVK--VMKEKGLTPDAYC 257
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+G +D A L + G + + YN+++ K G
Sbjct: 258 YDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNG 304
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ +Y+ EA L+++M G YN + G++D+ + ++ L
Sbjct: 117 TYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTL 176
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PDV+TYN+ L A +Q + EK E+ +P+ ++YS L S +
Sbjct: 177 NSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKI 236
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E++ +K M+++ + Y L++ + G D + M+ + Y +
Sbjct: 237 EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTI 296
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++L K G + A I+ + + + + N +L+A + A +++++KGI
Sbjct: 297 MAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI 356
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ L + G +++ +
Sbjct: 357 DPDVITYNSLISCLCRDGMVDEAI 380
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ-E 105
T S L+ S ++ K E+ L++ M E G Y+ ++ + G+LD + L
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD+V YN +AA + + A + F +L + P+ SY+T+ S
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + +M + + + Y+SL+S G DE + + M+S + N Y V
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401
Query: 226 ISSLVKLGEFEKA 238
+ L K + A
Sbjct: 402 LLGLCKAHRIDDA 414
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQML-Q 104
+ ++ + +N A + K+ E G CP YN ML+ S+G + M+ Q
Sbjct: 294 NTIMAALCKNGNGDHAVEIFGKLDEVG---CPPNVSSYNTMLSALWSSGDRYRALGMISQ 350
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L K PDV+TYN ++ + A ++ + P+ +SY T+ K
Sbjct: 351 MLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHR 410
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLL 191
+ A L M + C+ N Y+ L+
Sbjct: 411 IDDAIEVLAAMIENGCQPNETTYTLLI 437
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 5/281 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL--DKVPQMLQEL 106
+A++ Y + + + + L++ M G + +N ++N + +G + + ++L E+
Sbjct: 201 NAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEV 260
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD++TYN ++AC+ +++ E A K + ++ + PD +Y+ + S+Y + +
Sbjct: 261 RRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMS 320
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A K++E + + V Y+SLL + G D+V I + M+ + ++ Y +
Sbjct: 321 REAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTI 380
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ + A +Y + + + D +L+ + N ++ A + ++ +
Sbjct: 381 IHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARV 440
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
KP T+ L GY K G+ + E F + S K PDH
Sbjct: 441 KPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIK--PDH 479
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 171/399 (42%), Gaps = 39/399 (9%)
Query: 28 TRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
+R F++L K PD T ++LL+++ + + + + E M + GF K + YN
Sbjct: 320 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 379
Query: 86 MLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++++Y GQ D Q+ ++K SPD VTY + + + N + A + E+ +
Sbjct: 380 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAR 439
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ P ++S L Y K +A T M + + + +AYS +L + + +
Sbjct: 440 VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAM 499
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+++++M+ K + A Y ++ L K E + + E + G + +IL+
Sbjct: 500 KLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGE 559
Query: 265 I---NRNQLEMA----------------------ESFYNRLVTKGIKPCYTTWELLTWGY 299
N L +A E + L++K K + + ++ +
Sbjct: 560 CFDHAANMLRLAISQGCELDQYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMF 619
Query: 300 LKKG---QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
G + EK+L K+A V + L+ +Y+ G + AE +L L+ G
Sbjct: 620 RNSGNHSKAEKLLGVMKEA--GVEPTIATMHLLMVSYSG---SGQPEEAEKVLDNLKVEG 674
Query: 357 -HVSTEIYNSLLRTYAKAGKMPLII--VERMQKDNVQMD 392
+ST Y+S++ Y K G + I + M+KD ++ D
Sbjct: 675 LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPD 713
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A++ Y + S EA L + + GFL + YN +L + G +DKV ++
Sbjct: 302 PDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEI 361
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++ K D +TYN + + + A + + ++K + PD ++Y+ L K
Sbjct: 362 CEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGK 421
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ ++AA + EM + +S+L+ Y G + E + M+ K +
Sbjct: 422 ANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLA 481
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
Y+ ++ L++ E KA +Y E
Sbjct: 482 YSVMLDILLRFNESGKAMKLYQE 504
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 117/264 (44%), Gaps = 5/264 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
L+ ++ G + YN +++ L++ ++ ++ PD+ TYN ++
Sbjct: 256 LLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYG 315
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
A + F +L+ PD ++Y++L + + +K ++M K K+ +
Sbjct: 316 RCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEM 375
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDE 244
Y++++ +Y G D +++ M L + DA YT +I SL K ++A + E
Sbjct: 376 TYNTIIHMYGKRGQHDLAFQLYSD-MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSE 434
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ R + L+ Y + AE ++ ++ GIKP + + ++ L+ +
Sbjct: 435 MLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 494
Query: 305 MEKVLECFKKAIGSVRKWVPDHRL 328
K ++ +++ + + + PDH L
Sbjct: 495 SGKAMKLYQEMV--LHSFKPDHAL 516
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 156/389 (40%), Gaps = 40/389 (10%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGF-------------------------- 76
PD T + ++H + K +A L+++M GF
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345
Query: 77 -LKCPLPYNHMLNL----YISNGQLDKVPQMLQELKKNTS--PDVVTYNLWLAACASQND 129
+K P P N +LN Y+ +GQL + L E N PD+ TYN+ + +
Sbjct: 346 LIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A E+ + +P+ I+Y+ L + K L E+A L EM R N V Y+
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L+ L + +M + K + Y +I L K+ ++A ++
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ N L+ A + R + A + N ++ +G T+ L + K G +EK L
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLR 368
E +++ I + D N L + G +D A L N G V + YNS+L
Sbjct: 586 ELYEQMI--MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643
Query: 369 TYAKAGKM--PLIIVERMQKDNVQMDAET 395
K G++ L + +R+Q + V+ DA T
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 5/329 (1%)
Query: 49 SALLHSYVQNKKSAEAEALM-EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
+ L++ YV + + EA++ + E M GF YN +++ G L ++ E+
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
++ P+V+TY + + E A E+ + + + Y+ L + E
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A L EM + C+ + Y+SL+ + DE R++ M+ A N+ Y +I
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+L++ G F+KA + ++ T D N L+ A+ +E Y +++ G+
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+ ++ G K G+++ E + AI R +VPD + N L + G I A
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAIN--RGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
+L L+ G YN+ + K G
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQCKEG 684
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 112/280 (40%), Gaps = 36/280 (12%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWL 121
EA ++ +MS G + YN ++ ++ +L E+ K PD+ TYN +
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + A + F + + ++Y+TL ++ +KA T + +M R C
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-------------------------SLFAK 216
+++ Y+ L+ + +G ++ L ++++M+ + F
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622
Query: 217 MNDA----------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ DA Y V++ L K+G ++A N++D + D N ++
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ A F+ R + G P TW +L + LK+ E
Sbjct: 683 EGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQE 722
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 8/264 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K SP V T+ + + A N+ ++A ++ K P+ I Y TL +
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L+EM C + ++ ++ + + ++ +M+ ++ Y +
Sbjct: 270 SEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFL 329
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR-LVTKG 284
+ L ++G+ +A I + + + N L+ Y+ QL+ A+SF N ++ G
Sbjct: 330 LHGLCRIGKLNEARKILIKIPCPNNA----ILNTLINGYVMSGQLKEAQSFLNETMINFG 385
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+P T+ +L G K+G + + + S R P+ N L + G ++
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEM--SRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLL 367
A +L + G +++ IYN L+
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLI 467
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 165/389 (42%), Gaps = 13/389 (3%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F E++ + PD C++L+ + K+ +A +ME + + G + + YN +++ Y
Sbjct: 132 FLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYC 191
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWI 150
G++ Q+L + + SPDVVTYN L C S KE E ++++ + PD I
Sbjct: 192 KTGEIGSALQLLDRM--SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQR-ECYPDVI 248
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K +A L EM + C+ + V Y+ L++ G DE +R M
Sbjct: 249 TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHM 308
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S + N + ++ S+ G + AE E + NIL+ + +
Sbjct: 309 PSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLI 368
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A ++ G P ++ L K +ME+ +E + R PD
Sbjct: 369 GRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS--RGCYPDIVTYN 426
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
L + G +D A +L L + G I YN+++ +K GK + +++ M+
Sbjct: 427 TLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGK 486
Query: 388 NVQMDAETQKVL--KITSEMPVSEVSSIF 414
++ D T L ++ E V E + F
Sbjct: 487 GLKPDIITYSTLVGGLSREGKVDEAIAFF 515
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 118/308 (38%), Gaps = 40/308 (12%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + K P T + L++ + A ++EKM + G L YN +L+
Sbjct: 337 EKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ ++++ + L + + PD+VTYN L A + A + +L P
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I+Y+T+ K+ + A L EM+ + + + + YS+L+ + G DE + +
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ + K N Y ++ L K
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCK-----------------------------------AR 541
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDH 326
Q A F +V +G KP T++ +L G +G ++ LE + G V+K +
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQ 601
Query: 327 RLITAAYN 334
++ +N
Sbjct: 602 VVVKIPFN 609
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 156/389 (40%), Gaps = 40/389 (10%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGF-------------------------- 76
PD T + ++H + K +A L+++M GF
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345
Query: 77 -LKCPLPYNHMLNL----YISNGQLDKVPQMLQELKKNTS--PDVVTYNLWLAACASQND 129
+K P P N +LN Y+ +GQL + L E N PD+ TYN+ + +
Sbjct: 346 LIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A E+ + +P+ I+Y+ L + K L E+A L EM R N V Y+
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L+ L + +M + K + Y +I L K+ ++A ++
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ N L+ A + R + A + N ++ +G T+ L + K G +EK L
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLR 368
E +++ I + D N L + G +D A L N G V + YNS+L
Sbjct: 586 ELYEQMI--MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643
Query: 369 TYAKAGKM--PLIIVERMQKDNVQMDAET 395
K G++ L + +R+Q + V+ DA T
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 5/329 (1%)
Query: 49 SALLHSYVQNKKSAEAEALM-EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
+ L++ YV + + EA++ + E M GF YN +++ G L ++ E+
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
++ P+V+TY + + E A E+ + + + Y+ L + E
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A L EM + C+ + Y+SL+ + DE R++ M+ A N+ Y +I
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+L++ G F+KA + ++ T D N L+ A+ +E Y +++ G+
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+ ++ G K G+++ E + AI R +VPD + N L + G I A
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAIN--RGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
+L L+ G YN+ + K G
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQCKEG 684
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 113/280 (40%), Gaps = 36/280 (12%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWL 121
EA ++ +MS G + YN ++ ++ +L E+ K PD+ TYN +
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + A + F + + ++Y+TL ++ +KA T + +M R C
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-------------------------SLFAK 216
+++ Y+ L+ + +G ++ L ++++M+ + F
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622
Query: 217 MNDA----------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ DA Y V++ L K+G ++A N++D + D N ++
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ A SF+ R + G P TW +L + LK+ E
Sbjct: 683 EGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQE 722
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 8/264 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K SP V T+ + + A N+ ++A ++ K P+ I Y TL +
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L+EM C + ++ ++ + + ++ +M+ ++ Y +
Sbjct: 270 SEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFL 329
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR-LVTKG 284
+ L ++G+ +A I + + + N L+ Y+ QL+ A+SF N ++ G
Sbjct: 330 LHGLCRIGKLNEARKILIKIPCPNNA----ILNTLINGYVMSGQLKEAQSFLNETMINFG 385
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+P T+ +L G K+G + + + S R P+ N L + G ++
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEM--SRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLL 367
A +L + G +++ IYN L+
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLI 467
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 7/287 (2%)
Query: 112 PDVVTYNLWLAACASQND--KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P V++YN L A K +AE+ + E+ ++++ P+ +Y+ L + + +K
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EME+ C N V Y++L+ Y MG DE + K M S + N Y +I+ L
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G ++A I +E T D N LL Y A + +V G+ P
Sbjct: 295 CREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 354
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ L K + + +E F + +R P+ R T + QG ++ A +L
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQM--RIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 412
Query: 350 VTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDA 393
+ +G S YN+ + + +M L +V+ M + + D
Sbjct: 413 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDV 459
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 134/322 (41%), Gaps = 3/322 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ +Y + + EA L++ MS G + YN ++N G + + ++L+E+
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K +PD VTYN L + + A E+ + + P ++Y+ L + K
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +M R R N Y++L+ ++ G +E RI +M + Y
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L E+A + E D + +++ + + +L+ A +V KG+
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G + ++ + + ++ + PD T N +GD++ A
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD--MGLPPDEFTYTTLINAYCVEGDLNKA 548
Query: 346 EHLLVTLRNAGHVSTEIYNSLL 367
HL + + G + + S+L
Sbjct: 549 LHLHDEMIHKGFLPDAVTYSVL 570
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 133/307 (43%), Gaps = 4/307 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWL 121
EA ++E+M GF + YN +LN Y G + + E+ +N SP VVTY +
Sbjct: 302 EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 361
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + A + F +++ + P+ +Y+TL + + L +A L EM +
Sbjct: 362 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ V Y++ + + + +E L + ++M+ + Y+ +IS + GE ++A +
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
E + D + L+ +L A ++ G+ P T+ L Y
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+G + K L + I + ++PD + N L +Q A+ LL L V ++
Sbjct: 542 EGDLNKALHLHDEMIH--KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599
Query: 362 I-YNSLL 367
+ Y++L+
Sbjct: 600 VTYDTLI 606
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 161/397 (40%), Gaps = 56/397 (14%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL++S + + A ++M G Y +++ + G L++ ++L E+
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ SP VVTYN ++ E A E+ + + PD +SYST+ S + +
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A +EM ++ + V YSSL+ M E + ++M+ + ++ YT +
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 535
Query: 226 ISSLVKLGEFEKAENIYDEW--------------------------------------ES 247
I++ G+ KA +++DE ES
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 595
Query: 248 ISG--TGDPRVPNI----------LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ T D + N L+ + + + A+ + +V + KP + ++
Sbjct: 596 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 655
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG-DIDGAEHLLVTLRN 354
G+ + G + K +K+ I S +VP + L ++G + + +E + TLR+
Sbjct: 656 IHGHCRGGNLPKAFNLYKEMIHS--GFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS 713
Query: 355 AGHVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNV 389
E+ L+ K G M + ++ M KD +
Sbjct: 714 CRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGL 750
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 130/289 (44%), Gaps = 3/289 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ ++ + ++A+A + M + G + + YN +++ G++D+ ++L+++
Sbjct: 337 TYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PD TYN+ + +S E A F +K+ K PD ++Y+TL + K+
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 456
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A EM+ C + + +L+ G ++ L +++ + N Y +
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNAL 516
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS + G+ +K ++ + S D IL+ + R MA +V +G
Sbjct: 517 ISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 576
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
P T+ +L GQ+E FK+ I + + PD + +A N
Sbjct: 577 TPALATYNVLIRSLSMAGQVEDAYTLFKEMIA--KGFNPDMQTYSALPN 623
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 147/363 (40%), Gaps = 40/363 (11%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L++++ + + E + ME G + YN ++ +I G+L + Q+ + + K
Sbjct: 237 LVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKE 296
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ PDV TYNL +A C S+ +E A F E ++ + D +YS L + K KA
Sbjct: 297 SVPDVFTYNLLIALCKSKQLEE-ALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKAL 355
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI----------------------- 206
M+K C + V Y+ L+S G DE L +
Sbjct: 356 EVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVL 415
Query: 207 -----WKKMMSLFAKM-------NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
++K S F M + Y +++ L KL ++A +++DE ++ D
Sbjct: 416 SSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDL 475
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
L+ ++E A RLV G P + L G+ + GQ++K E F+
Sbjct: 476 TTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQD 535
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKA 373
I PD T +G A LL + GH + YN L+R+ + A
Sbjct: 536 MIEC--SCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMA 593
Query: 374 GKM 376
G++
Sbjct: 594 GQV 596
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 122/297 (41%), Gaps = 11/297 (3%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDWISYSTLTSLYIKMELPEK 167
+ +PDVV YN +A D + A F LK+ P+ +S+ TL KM
Sbjct: 120 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM + + ++L+ +G + R+ M + + Y +++
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ + G+ + + + E G V N ++ +I +L A + +TK
Sbjct: 240 AHCRAGQMHEVAS-FMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESV 298
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ LL K Q+E+ L F++A G V V + + A+ K G A
Sbjct: 299 PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGK---AGRAAKA 354
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ ++ AG + T +YN L+ K GK+ L ++E M + + D T ++
Sbjct: 355 LEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 411
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+AL+ + ++ + + L + M EC + Y ++ + G ++LQE+ +
Sbjct: 514 NALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 573
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ +P + TYN+ + + + E A F E+ +PD +YS L +L
Sbjct: 574 EGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 624
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ + +GQ+DK ++ Q++ + + PD +TY + + + + A + E+
Sbjct: 513 YNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 572
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
+ P +Y+ L E A T KEM + + YS+L +L T
Sbjct: 573 REGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLST 626
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 168/387 (43%), Gaps = 10/387 (2%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+N+ R P +C++LL++ V+N ++ A + ++M G + + M+N +
Sbjct: 145 FDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCK 204
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G++D+ +++++ P++VTY+ + S D E A+ + + + + ++
Sbjct: 205 DGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT 264
Query: 152 YSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+ L Y K ++A L+ M E+ + AY L+ Y G D+ +R+ +M
Sbjct: 265 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 324
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ L K N +I+ K GE +AE + + D N LL Y
Sbjct: 325 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 384
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A + ++++ +GI+P T+ L G + G + L+ + + R PD +
Sbjct: 385 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMK--RGVAPDEVGYS 442
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKD 387
+ L + + +GA L + G + I +N+++ K GKM I ++M+
Sbjct: 443 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 502
Query: 388 NVQMDAETQKVLKITSEMPVSEVSSIF 414
D T + L I S V F
Sbjct: 503 GCSPDGITYRTL-IDGYCKASNVGQAF 528
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 2/262 (0%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P +L YV+ + A + + M +CG + N +LN + NG+ + Q
Sbjct: 122 PTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQ 181
Query: 105 E-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ ++ PDV ++ + A + A +++ ++P+ ++Y +L + Y+ +
Sbjct: 182 QMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLG 241
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE-Y 222
E A LK M ++ +N V Y+ L+ Y DE ++ + M A + D Y
Sbjct: 242 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 301
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + G+ + A + DE + + + N L+ Y R ++ AE R+V
Sbjct: 302 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 361
Query: 283 KGIKPCYTTWELLTWGYLKKGQ 304
+KP ++ L GY ++G
Sbjct: 362 WNLKPDSYSYNTLLDGYCREGH 383
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ----LDKVPQML 103
C++L++ Y + + EAE ++ +M + YN +L+ Y G + +ML
Sbjct: 336 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 395
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
QE P V+TYN L + A + + + K + PD + YSTL KME
Sbjct: 396 QE---GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 452
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
E A+T K++ R K+R+ +++++S MG E I+ KM L + Y
Sbjct: 453 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 512
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I K +A + E + + N L++ +L + +
Sbjct: 513 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 572
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECF 312
G+ P T+ L G+ K+G ++K +
Sbjct: 573 GLTPNIVTYGALIDGWCKEGMLDKAFSSY 601
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 5/267 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSE-CGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + L+ Y + K EAE ++ M E + Y +++ Y G++D ++L E
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ ++ N + + + AE + + PD SY+TL Y +
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A +M + + Y++LL +G D+ L+IW MM ++ Y+
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L K+ FE A ++ + + T N +++ ++ AE ++++ G
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503
Query: 285 IKPCYTTWELLTWGYLKK---GQMEKV 308
P T+ L GY K GQ KV
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKV 530
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 139/362 (38%), Gaps = 36/362 (9%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S LL + + A L + + GF K + +N M++ G++ + ++ ++K
Sbjct: 442 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 501
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
SPD +TY + ++ A K +++ I P Y++L S K +
Sbjct: 502 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 561
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
L EM R N V Y +L+ + G D+ + +M N + ++S
Sbjct: 562 VTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 621
Query: 228 SLVKLGE----------------------FEKAENIYDEWESISGTGDPR---------- 255
L +LG F K++ Y + I+ + D
Sbjct: 622 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNI 681
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
V NI +A +++ A F++ L KG P T+ L GY G +++ +
Sbjct: 682 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 741
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ R VP+ A N L + ++D A+ L L G + YN+L+ Y K G
Sbjct: 742 L--RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 799
Query: 375 KM 376
M
Sbjct: 800 NM 801
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 126/311 (40%), Gaps = 23/311 (7%)
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAE 134
F P ++ +L +Y+ G + + K P + + N L + TA
Sbjct: 118 FAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 177
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ ++ + I PD S + + + K ++AA +K+ME N V Y SL++ Y
Sbjct: 178 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGD 253
++G + + K M N YT +I K + ++AE + E + D
Sbjct: 238 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 297
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
R +L+ Y +++ A + ++ G+K L GY K+G++
Sbjct: 298 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH------- 350
Query: 314 KAIGSVRKWV-----PDHRLITAAYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI-Y 363
+A G + + V PD + +YN L + +G A +L + G T + Y
Sbjct: 351 EAEGVITRMVDWNLKPD----SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 406
Query: 364 NSLLRTYAKAG 374
N+LL+ + G
Sbjct: 407 NTLLKGLCRVG 417
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 6/205 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-L 106
CS ++ + + EA LM+KM + GF + L I + K+ L E
Sbjct: 616 CSTMVSGLYRLGRIDEANLLMQKMVDHGFFP---DHECFLKSDIRYAAIQKIADSLDESC 672
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K P+ + YN+ +A + A + F L PD +Y TL Y +
Sbjct: 673 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 732
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A EM +R N V Y++L++ D R++ K+ N Y +I
Sbjct: 733 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 792
Query: 227 SSLVKLGEFEKAENIYDEW--ESIS 249
K+G + A + D+ E IS
Sbjct: 793 DGYCKIGNMDAAFKLKDKMIEEGIS 817
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 120/321 (37%), Gaps = 37/321 (11%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F+ + D PD T L+ Y + +A + M YN +++
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 552
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ +L +V +L E+ + +P++VTY + + + A ++ E+ + + +
Sbjct: 553 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 612
Query: 149 WISYSTLTS-LY-------------------------------IKMELPEKAATTLKEME 176
I ST+ S LY I+ +K A +L E
Sbjct: 613 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 672
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND-AEYTCVISSLVKLGEF 235
K N + Y+ ++ G D+ R + M+SL + D Y +I G
Sbjct: 673 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS-MLSLKGFVPDNFTYCTLIHGYSAAGNV 731
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
++A + DE + N L+ ++ A+ +++L KG+ P T+ L
Sbjct: 732 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 791
Query: 296 TWGYLKKGQMEKVLECFKKAI 316
GY K G M+ + K I
Sbjct: 792 IDGYCKIGNMDAAFKLKDKMI 812
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 8/299 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + + G +KV ++ E+ + + PD VTY+ +AA ++A F E+
Sbjct: 197 YNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEM 256
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+T+ +Y K+ EKA ++EM+++ C Y+ L+ G
Sbjct: 257 KENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKV 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+E I+ M+ K + +I+ L K G A +++E ES+ T + N +
Sbjct: 317 EEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTV 376
Query: 261 LAAYINRNQLEMAESF--YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+ A ++ +E+F Y ++ G+ P T+ +L G+ K ++EK L ++
Sbjct: 377 IKALF-ESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM--D 433
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + N L + + A L LR N G+ S +Y +++ K G++
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRL 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 27 QTRARENF--FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
+ RA E F +E + + P T S L+ + + + +A L+E+M E GF CP
Sbjct: 384 KARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAA 443
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y ++N + + ++ QEL++N Y + + A F E+K
Sbjct: 444 YCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMK 503
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K +PD +Y+ L S +++ + ++A + L+ ME+ C + +++ +L+ + G
Sbjct: 504 KLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+ ++ +M + K + Y V+ L + G FE+A + E S
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNS 609
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 132/325 (40%), Gaps = 49/325 (15%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFL---E 139
N+++NL G+L ++ +E++ +P+VVTYN + A K A +AFL +
Sbjct: 339 NNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFES--KARASEAFLWYEK 396
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS------- 192
+K+ + P +YS L + K EKA L+EM+++ AY SL++
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKR 456
Query: 193 ----------LYTNMGYKD------------------EVLRIWKKMMSLFAKMNDAEYTC 224
L N GY E + ++ +M L + Y
Sbjct: 457 YEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S +V++G ++A ++ E T D NI+L + + A + R+
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW-VPDHRLITAAYNKLEEQGDID 343
IKP ++ + + G E+ + K+ ++ + + I A K++E
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHTPA 636
Query: 344 GAEHLLVT-------LRNAGHVSTE 361
G + + +R GHVS+E
Sbjct: 637 GQTVMHIVNIKIINLVRREGHVSSE 661
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLW 120
+EA L +M + G YN +++ + G D+ +L+ +++N +PD+ ++N+
Sbjct: 493 SEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNII 552
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L A + A + F +K +KI PD +SY+T+ + + E+AA +KEM +
Sbjct: 553 LNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGF 612
Query: 181 RKNRVAYSSLL 191
+ + YSS+L
Sbjct: 613 EYDLITYSSIL 623
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + D +Y L + + + T++EM + TC S ++ +
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMV 175
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI- 259
++ L I+ ++ K Y +I L++ G EK +Y+E + GD +
Sbjct: 176 NKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE---MCNEGDCLPDTVT 232
Query: 260 ---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
L+AA+ + + A S ++ + G+ P + + Y K G++EK L
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKAL 285
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 8/299 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + + G +KV ++ E+ + + PD VTY+ +AA ++A F E+
Sbjct: 197 YNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEM 256
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+T+ +Y K+ EKA ++EM+++ C Y+ L+ G
Sbjct: 257 KENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKV 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+E I+ M+ K + +I+ L K G A +++E ES+ T + N +
Sbjct: 317 EEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTV 376
Query: 261 LAAYINRNQLEMAESF--YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+ A ++ +E+F Y ++ G+ P T+ +L G+ K ++EK L ++
Sbjct: 377 IKALF-ESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM--D 433
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + N L + + A L LR N G+ S +Y +++ K G++
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRL 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 27 QTRARENF--FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
+ RA E F +E + + P T S L+ + + + +A L+E+M E GF CP
Sbjct: 384 KARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAA 443
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y ++N + + ++ QEL++N Y + + A F E+K
Sbjct: 444 YCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMK 503
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K +PD +Y+ L S +++ + ++A + L+ ME+ C + +++ +L+ + G
Sbjct: 504 KLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+ ++ +M + K + Y V+ L + G FE+A + E S
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNS 609
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLW 120
+EA L +M + G YN +++ + G D+ +L+ +++N +PD+ ++N+
Sbjct: 493 SEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNII 552
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L A + A + F +K +KI PD +SY+T+ + + E+AA +KEM +
Sbjct: 553 LNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGF 612
Query: 181 RKNRVAYSSLL 191
+ + YSS+L
Sbjct: 613 EYDLITYSSIL 623
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFL---E 139
N+++NL G+L ++ +E++ +P+VVTYN + A K A +AFL +
Sbjct: 339 NNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFES--KARASEAFLWYEK 396
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS------- 192
+K+ + P +YS L + K EKA L+EM+++ AY SL++
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKR 456
Query: 193 ----------LYTNMGYKD------------------EVLRIWKKMMSLFAKMNDAEYTC 224
L N GY E + ++ +M L + Y
Sbjct: 457 YEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S +V++G ++A ++ E T D NI+L + + A + R+
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
IKP ++ + + G E+ + K+
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKE 606
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + D +Y L + + + T++EM + TC S ++ +
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMV 175
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI- 259
++ L I+ ++ K Y +I L++ G EK +Y+E + GD +
Sbjct: 176 NKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE---MCNEGDCLPDTVT 232
Query: 260 ---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
L+AA+ + + A S ++ + G+ P + + Y K G++EK L
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKAL 285
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 13/296 (4%)
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKNTSPD--VVTYNLWLAACASQNDKETAEKAFLE 139
P N +S LD+ ++ Q L PD V +YN+ L E A + F E
Sbjct: 233 PSPEACNAVLSRLPLDEAIELFQGL-----PDKNVCSYNILLKVLCGAGRVEDARQLFDE 287
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ PD ++Y L Y + E A L +M R N Y+S+++L + G
Sbjct: 288 MASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGR 344
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ L + + M+ +++A YT V+S G+ A +DE + D
Sbjct: 345 VSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTT 404
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L+ +L+ AE ++ + + T+ +L GY K+G+M + + +
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQ-- 462
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
R P+ TA + L +QGD+ A LL + N G ++ YNSL+ KAG
Sbjct: 463 RGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 518
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 5/268 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ +L + A ++M G + Y ++N G+L + ++LQE L
Sbjct: 368 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ D VTY + + + A + + + + P+ ++Y+ L+ K +
Sbjct: 428 RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQA 487
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + N Y+SL++ GY D+ +R M + K + YT +I
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLID 547
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGI 285
+L K GE ++A ++ E + P + N+L+ + ++E + ++ K I
Sbjct: 548 ALCKSGELDRAHDLLQEM--LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI 605
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK 313
P TT+ L Y M+ E +K
Sbjct: 606 HPNATTYNSLMKQYCIGNNMKSTTEIYK 633
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +L+ + + G L + E+ +K + D VTY + + + AEK E+
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
++D D ++Y+ L Y K +A M +R N V Y++L G
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ +M + ++N Y +I+ L K G ++A + ++ D L+
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLE 310
A +L+ A ++ GIKP T+ +L G+ G++E K+LE
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 1/219 (0%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACAS 126
M M G Y +++ +G+LD+ +LQE+ N P +VTYN+ +
Sbjct: 527 MADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCM 586
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E +K + + I P+ +Y++L Y + K M R N
Sbjct: 587 SGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENT 646
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+ L+ + E +M+ ++ + Y+ +I L K +F +A ++ +
Sbjct: 647 YNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMR 706
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
T +P V N + N + LE + + LV I
Sbjct: 707 KEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 98/250 (39%), Gaps = 1/250 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y + K AEA + M + G + Y + + G + ++L E+
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + TYN + + A + ++ + PD +Y+TL K
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+EM + V Y+ L++ + G + ++ + M+ N Y +
Sbjct: 556 DRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ + IY S + + NIL+ + ++ A+ F+N ++ KG
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675
Query: 286 KPCYTTWELL 295
+ +++ L
Sbjct: 676 RLTASSYSAL 685
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 6/341 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T L+H Y +AE L+ +M G Y +L Y + L+KV L+
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+K PD Y + + +S + A ++K + PD + Y +L S + K
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADM 679
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA L EM K+ Y++L+ + I+ ++ N YT +
Sbjct: 680 EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ A ++Y+E + D V ++L A N L+ A ++ +G
Sbjct: 740 IDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY 799
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+++ L G+ K+G++++ ++ + + VP + L E G + A
Sbjct: 800 A-IISSFNTLVHGFCKRGKLQETVKFLHVMMD--KDIVPSLLTVENIVIGLGEAGKLSEA 856
Query: 346 EHLLVTL--RNAGHVSTEIYNSLLRTYAKAGKMPLIIVERM 384
+ V L +NA H T+ +SL G +PL ++ M
Sbjct: 857 HTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNM 897
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+ ++ Y L+ ++++E+++ S +VVTYN + E A E++
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME 305
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +Y + + K P++A L EM N V YS+L+ + G D
Sbjct: 306 DYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNAD 365
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E +I K+M + + N Y +I L KLG +A I + I D N+++
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
++ ++ E A N + GI P T+ ++ G + G+ E+
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 163/385 (42%), Gaps = 39/385 (10%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T A+++ + + +A+ L+++MS G + + Y+ +++ ++ G D+ ++
Sbjct: 311 PDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKI 370
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++E+ P+ +TY+ + A + ++ K D ++Y+ + +++
Sbjct: 371 VKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLR 430
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+A L EM K N YS +++ +G + + ++M++ K N
Sbjct: 431 QHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV 490
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +IS + G F A + + T D N L+ N +++ A +Y+ ++
Sbjct: 491 YAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEML 550
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEK----------------------VLECFKKA---- 315
KG +P T+ L GY G +EK +LE + K+
Sbjct: 551 EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLE 610
Query: 316 -IGSVRK------WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
+ S K +PD+RL + L G + A +L + G V + IY SL+
Sbjct: 611 KVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLI 670
Query: 368 RTYAKAGKM--PLIIVERMQKDNVQ 390
+ KA M + +++ M K ++
Sbjct: 671 SGFCKAADMEKAVGLLDEMAKKGIE 695
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/413 (19%), Positives = 160/413 (38%), Gaps = 52/413 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S +++ Q +S A L+E+M G Y +++ Y G + L+++
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 107 -KKNTSPDVVTYNLWLAACAS-----------------------------------QNDK 130
++N +PD+ YN + ++ +
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNL 574
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYSS 189
E AE+ ++ + ++P+ Y+ + Y K + EK ++TLK M EK NR+ Y
Sbjct: 575 EKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL-YGI 633
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
++ ++ G+ + + + + Y +IS K + EKA + DE
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
N L+ + + + A + +N ++ KG+ P T+ L GY K G + +
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
+ + + + PD + + GD+ A + + G+ +N+L+
Sbjct: 754 DLYNEML--TEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHG 811
Query: 370 YAKAGKMPLIIVERMQKDNVQMDAET--------QKVLKITSEMPVSEVSSIF 414
+ K GK+ E ++ +V MD + V+ + +SE +IF
Sbjct: 812 FCKRGKLQ----ETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIF 860
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ F+E I PD +YSTL Y K+ E A ++EM + C N V Y++L+
Sbjct: 231 RGFME--GAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL 288
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G +E +KK M + + D Y +I+ L K G ++A+ + DE +
Sbjct: 289 CRAGAIEEAFG-YKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
V + L+ ++ + + A + G++P T++ L G K G+M + K
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407
Query: 314 K 314
+
Sbjct: 408 Q 408
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 156/364 (42%), Gaps = 40/364 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+Y + K A + EKM + G + YN ML++Y G+ +K+ +L E++
Sbjct: 213 TTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMR 272
Query: 108 KNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
N D T + ++AC + + A K F LK +Y++L ++ K +
Sbjct: 273 SNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYS 332
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + LKEMEK C + V Y+ L++ Y G+ +E M+ N YT VI
Sbjct: 333 EALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVI 392
Query: 227 SSLVKLGEFEKAENIYDEW--------------------------ESISGTGDPR----V 256
++ K G+ +KA + + + E I D R
Sbjct: 393 NAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCA 452
Query: 257 P-----NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
P N +LA N+ + + + + G +P T+ L Y + G V++
Sbjct: 453 PNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKM 512
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
+++ I + + P A N L +GD + AE +++ +++ G E Y+ +L Y
Sbjct: 513 YEEMIKA--GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCY 570
Query: 371 AKAG 374
AK G
Sbjct: 571 AKGG 574
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 44/392 (11%)
Query: 24 QALQTRARENFFENLPDK--MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP- 80
+ L AR+ FF L + + G T ++LL + + +EA +++++M + CP
Sbjct: 293 EGLLDEARK-FFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKN---NCPP 348
Query: 81 --LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ YN ++ Y+ G ++ + + +K P+ +TY + A ++ A F
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++K++ P+ +Y+ + + K E+ L +M C N V ++++L++ N
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNK 468
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G V R++++M S + N + +I + + G +Y+E T
Sbjct: 469 GMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTY 528
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEK------- 307
N LL A R E AES + +KG KP T++ L+ Y K G +EK
Sbjct: 529 NALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYN 588
Query: 308 -------------VLECFKK--AIGSVR--------KWVPDHRLITAAYNKLEEQGDIDG 344
VL FK+ +G R + PD L + + + D
Sbjct: 589 GHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDR 648
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
A +L +R +G YNSL+ YA+ G+
Sbjct: 649 AHEMLRLIRESGLQPDLVTYNSLMDMYARGGE 680
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 1/272 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT +AL+ +Y + + + E+M + GF C YN +LN G + ++ +
Sbjct: 491 DTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILD 550
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K K P+ +Y+L L A + EK E+ I P WI TL K
Sbjct: 551 MKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRA 610
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+E K + + V ++S+LS++ D + + + + + Y
Sbjct: 611 LMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNS 670
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + GE K E I + G D N ++ + + ++ A + + G
Sbjct: 671 LMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISG 730
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
I+PC T+ GY KG +V E I
Sbjct: 731 IRPCIVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ML+++ N D+ +ML+ ++++ PD+VTYN + A + E+ ++
Sbjct: 633 FNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ 692
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K+ PD +SY+T+ + + L ++A TL EM R V Y++ ++ Y+ G
Sbjct: 693 KSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFS 752
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
EV + M+ + N+ Y V+ K ++++A
Sbjct: 753 EVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEA 789
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 129/332 (38%), Gaps = 67/332 (20%)
Query: 86 MLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+LNLY N ++D Q+++ L + ++ A + E+ +
Sbjct: 162 ILNLYSRNEKIDN--QLVE--------------LMVRILGRESQHSVALRLLDEISVEEY 205
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
D +++T+ Y ++ E+A T ++M K V Y+ +L +Y MG R
Sbjct: 206 SLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMG------R 259
Query: 206 IWKKMMSLFAKMNDA-----EYTC--VISSLVKLGEFEKAENIYDEWES---ISGT---- 251
W K++ L +M E+TC VIS+ + G ++A + +S ++GT
Sbjct: 260 SWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYN 319
Query: 252 ----------------------------GDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
D N L+AAY+ E F + ++ K
Sbjct: 320 SLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRK 379
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GI P T+ + Y K G+ +K L F++ S VP+ A L ++ ++
Sbjct: 380 GIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES--GCVPNVCTYNAILGMLGKKSRLE 437
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+L +R+ G + +N++L G
Sbjct: 438 EMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKG 469
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 156/364 (42%), Gaps = 40/364 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+Y + K A + EKM + G + YN ML++Y G+ +K+ +L E++
Sbjct: 213 TTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMR 272
Query: 108 KNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
N D T + ++AC + + A K F LK +Y++L ++ K +
Sbjct: 273 SNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYS 332
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + LKEMEK C + V Y+ L++ Y G+ +E M+ N YT VI
Sbjct: 333 EALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVI 392
Query: 227 SSLVKLGEFEKAENIYDEW--------------------------ESISGTGDPR----V 256
++ K G+ +KA + + + E I D R
Sbjct: 393 NAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCA 452
Query: 257 P-----NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
P N +LA N+ + + + + G +P T+ L Y + G V++
Sbjct: 453 PNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKM 512
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
+++ I + + P A N L +GD + AE +++ +++ G E Y+ +L Y
Sbjct: 513 YEEMIKA--GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCY 570
Query: 371 AKAG 374
AK G
Sbjct: 571 AKGG 574
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 44/392 (11%)
Query: 24 QALQTRARENFFENLPDK--MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP- 80
+ L AR+ FF L + + G T ++LL + + +EA +++++M + CP
Sbjct: 293 EGLLDEARK-FFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKN---NCPP 348
Query: 81 --LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ YN ++ Y+ G ++ + + +K P+ +TY + A ++ A F
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++K++ P+ +Y+ + + K E+ L +M C N V ++++L++ N
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNK 468
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G V R++++M S + N + +I + + G +Y+E T
Sbjct: 469 GMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTY 528
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEK------- 307
N LL A R E AES + +KG KP T++ L+ Y K G +EK
Sbjct: 529 NALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYN 588
Query: 308 -------------VLECFKK--AIGSVR--------KWVPDHRLITAAYNKLEEQGDIDG 344
VL FK+ +G R + PD L + + + D
Sbjct: 589 GHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDR 648
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
A +L +R +G YNSL+ YA+ G+
Sbjct: 649 AHEMLRLIRESGLQPDLVTYNSLMDMYARGGE 680
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 1/272 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT +AL+ +Y + + + E+M + GF C YN +LN G + ++ +
Sbjct: 491 DTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILD 550
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K K P+ +Y+L L A + EK E+ I P WI TL K
Sbjct: 551 MKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRA 610
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+E K + + V ++S+LS++ D + + + + + Y
Sbjct: 611 LMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNS 670
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + GE K E I + G D N ++ + + ++ A + + G
Sbjct: 671 LMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISG 730
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
I+PC T+ GY KG +V E I
Sbjct: 731 IRPCIVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ML+++ N D+ +ML+ ++++ PD+VTYN + A + E+ ++
Sbjct: 633 FNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ 692
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K+ PD +SY+T+ + + L ++A TL EM R V Y++ ++ Y+ G
Sbjct: 693 KSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFS 752
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
EV + M+ + N+ Y V+ K ++++A
Sbjct: 753 EVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEA 789
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 129/332 (38%), Gaps = 67/332 (20%)
Query: 86 MLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+LNLY N ++D Q+++ L + ++ A + E+ +
Sbjct: 162 ILNLYSRNEKIDN--QLVE--------------LMVRILGRESQHSVALRLLDEISVEEY 205
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
D +++T+ Y ++ E+A T ++M K V Y+ +L +Y MG R
Sbjct: 206 SLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMG------R 259
Query: 206 IWKKMMSLFAKMNDA-----EYTC--VISSLVKLGEFEKAENIYDEWES---ISGT---- 251
W K++ L +M E+TC VIS+ + G ++A + +S ++GT
Sbjct: 260 SWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYN 319
Query: 252 ----------------------------GDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
D N L+AAY+ E F + ++ K
Sbjct: 320 SLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRK 379
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GI P T+ + Y K G+ +K L F++ S VP+ A L ++ ++
Sbjct: 380 GIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES--GCVPNVCTYNAILGMLGKKSRLE 437
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+L +R+ G + +N++L G
Sbjct: 438 EMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKG 469
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 141/293 (48%), Gaps = 7/293 (2%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYN 118
K +A+A++++M E + +N +++ + + L ++ +E++ + P VVTYN
Sbjct: 283 KMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYN 342
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ ++ A+ E+ + + P+ I+Y+ L + Y K +L E+A + K+
Sbjct: 343 SLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQ 402
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
N + +++LL Y G +E + K M+ N + Y C+I + G+ E+
Sbjct: 403 GLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEV 462
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+N+ +E + D NIL++A+ + + + A + ++ KG+KP + T+ +L G
Sbjct: 463 KNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG 522
Query: 299 YLKKGQMEKVLECFKKAIGSVRKW--VPDHRLITAAYNKLEEQGDIDGAEHLL 349
Y +G + L +K + +W V + ++ Y + +G ++ A LL
Sbjct: 523 YCMEGNLRAALN-LRKQMEKEGRWANVVTYNVLIQGYCR---KGKLEDANGLL 571
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 1/261 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+ + +++ + A + E+M G + YN ++N + G+L++ +L E
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L N P+V+TYN + + E A + F + K + P+ I+++TL Y K
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A K M ++ N Y+ L+ + G +EV + +M K + Y +
Sbjct: 425 EEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL 484
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ + E +KA + DE NILL Y L A + ++ +G
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544
Query: 286 KPCYTTWELLTWGYLKKGQME 306
T+ +L GY +KG++E
Sbjct: 545 WANVVTYNVLIQGYCRKGKLE 565
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 153/362 (42%), Gaps = 17/362 (4%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECG--FLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
++L S+V+ + + + +S C F + + ++ Y+ N K L+ K
Sbjct: 128 SILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVEN---SKTVLGLEAFK 184
Query: 108 KNTS----PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ V++ N L+A +N+ E + E+ + KI P+ I+++T+ + K+
Sbjct: 185 RAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVG 244
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR---IWKKMMSLFAKMNDA 220
KA + +M+ N V Y++L+ Y MG ++ + I K+M+ N
Sbjct: 245 KLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSV 304
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+ +I K A +++E +S N L+ N +L A+ + +
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
++ +KP T+ L GY KK +E+ E F IG + P+ + + G
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDN-IGK-QGLTPNVITFNTLLHGYCKFG 422
Query: 341 DIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQK 397
++ A L + G + + YN L+ + + GKM + ++ MQ V+ D T
Sbjct: 423 KMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYN 482
Query: 398 VL 399
+L
Sbjct: 483 IL 484
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 39/202 (19%)
Query: 24 QALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+ L ARE F+N+ + P+ T + LLH Y + K EA L + M E GFL
Sbjct: 386 KKLLEEARE-LFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAS 444
Query: 82 PYNHMLNLYISNGQLDKVPQMLQE------------------------------------ 105
YN ++ + G++++V +L E
Sbjct: 445 TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM 504
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P +TYN+ L + + A +++K + ++Y+ L Y +
Sbjct: 505 LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564
Query: 166 EKAATTLKEMEKRTCRKNRVAY 187
E A L EM ++ NR Y
Sbjct: 565 EDANGLLNEMLEKGLIPNRTTY 586
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 159/354 (44%), Gaps = 10/354 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQML 103
T + ++H V+ + EA L M E KCP + Y +++ Y GQ++ +
Sbjct: 153 TLNIIIHCLVKIGQCGEAIELFNSMRE-RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIF 211
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ + P++V YN L A AS+ A F +KK + PD +SY++L + Y +
Sbjct: 212 DLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRS 271
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
PEKA +M+K +C+ N+V+Y++L+ Y + G E + + +M + +
Sbjct: 272 AQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSI 331
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ ++++ + + + E I + S + N + +Y++ E A Y +
Sbjct: 332 STLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRE 391
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+KP T+ +L G K G+ + L F+ + S K + ++ +QG +
Sbjct: 392 SNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDS--KVSSTKEVYSSLIYSYIKQGKL 449
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLIIVERMQKDNVQMDA 393
AE +++ +G + Y +L++ Y G K + + M+ + + DA
Sbjct: 450 SEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 503
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 6/294 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++LL +Y EA A+ + + G + Y +LN Y + Q +K ++ ++KK
Sbjct: 227 NSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKK 286
Query: 109 NTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N+ P+ V+YN + A S + A E++K I PD +S STL + + +
Sbjct: 287 NSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITR 346
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
T L+ R N VAY+S + Y + G ++ L ++ M K + Y +IS
Sbjct: 347 IETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILIS 406
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
KLG++ ++ +++ + V + L+ +YI + +L AES ++ + G P
Sbjct: 407 GSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFP 466
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA---AYNKLEE 338
T+ L Y G ++ + FK+ V PD + ++ A+NK E
Sbjct: 467 DVLTYTTLIQAYNAGGGWKRAWDLFKEM--EVNGIPPDAIICSSLMEAFNKGGE 518
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S +LL++Y ++ + +A + KM + + YN +++ Y S G L + +
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGL 315
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E++K+ PDVV+ + LAAC E + ID + ++Y++ Y+
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLS 375
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
EKA M + + + V Y+ L+S + +G E LR ++ M+
Sbjct: 376 FGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEV 435
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +I S +K G+ +AE+ + + D L+ AY + A + +
Sbjct: 436 YSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEME 495
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
GI P L + K G+ E+VL+
Sbjct: 496 VNGIPPDAIICSSLMEAFNKGGEPERVLQ 524
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 139/359 (38%), Gaps = 41/359 (11%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
D ++ Y ++ + +A L +M E YN +++ + GQ ++++
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMED 71
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ P TYN + AC + + + A + ++ + + PD ++++ + S
Sbjct: 72 MLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQ 131
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM--NDAEY 222
KA + + M+ + + ++ +G E + ++ M K + Y
Sbjct: 132 YSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY 191
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T ++ S G+ E + I+D + + N LL AY +R A + +N +
Sbjct: 192 TSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK 251
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G++P ++ L Y + Q EK E F NK++
Sbjct: 252 NGLRPDIVSYTSLLNAYGRSAQPEKAREVF---------------------NKMK----- 285
Query: 343 DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+N+ + YN+L+ Y AG K + ++ M+KD +Q D + L
Sbjct: 286 ----------KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTL 334
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 126/323 (39%), Gaps = 54/323 (16%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + S LL + + ++ E ++E G + YN + Y+S G +K ++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 103 LQELKK-NTSPDVVTYNLWLAACAS----------------------------------- 126
+++ N PD VTYN+ ++ +
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIK 445
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
Q AE F +KK+ PD ++Y+TL Y ++A KEME + +
Sbjct: 446 QGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAII 505
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA----ENIY 242
SSL+ + G + VL++ + M +N Y +I+S + +++ A E +
Sbjct: 506 CSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLD 565
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
SIS V N L N +++ FY ++VT +T+ ++ L
Sbjct: 566 SSLSSISVGTLNHVLNFLGKCGKTENMMKL---FY-KMVTSCSTVGLSTYAVVLRNLLVV 621
Query: 303 GQMEKVLECFKKAIGSVRKWVPD 325
G+ K +E V +W+ D
Sbjct: 622 GKWRKYIE--------VLQWMED 636
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 27/255 (10%)
Query: 1 MERRRPHGAQVRAQSYRQRVA---------QAQALQTRARENFFENLPDKMRGPDTCSAL 51
+E R G + +Y + +A L T RE+ + PD + T + L
Sbjct: 351 LEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVK--PDAV----TYNIL 404
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS 111
+ + K E+ E M + Y+ ++ YI G+L + +KK+
Sbjct: 405 ISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGC 464
Query: 112 -PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV+TY + A + + A F E++ I PD I S+L + K PE+
Sbjct: 465 FPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQ 524
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
++ M+K++ N+ +Y +++ T ++R WK + ++ + + + +L
Sbjct: 525 LMEFMKKKSIPLNQKSYFEIIASCT-------MIRDWKTASEMIEYLDSSLSSISVGTLN 577
Query: 231 K----LGEFEKAENI 241
LG+ K EN+
Sbjct: 578 HVLNFLGKCGKTENM 592
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 150/325 (46%), Gaps = 8/325 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++ + ++ +A L+++M + G YN ++ +LD+ +ML+E+ +
Sbjct: 86 IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PDVVTYN ++ + + A K L + + PD +SY+T+ + K + A+
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSAS 202
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L +M R C + V YSSL+ + G + + + M+ L + N Y ++ +L
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+LG KAE++ E E T D N + +++ A++ ++R+V +G P
Sbjct: 263 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+++ +L KK +++ + ++A + + D L T + L + G D A L
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQA--REKYQIVDILLYTVLLDGLCKGGRFDEACALF 380
Query: 350 VTLRNAGHVSTEI--YNSLLRTYAK 372
+ + ++ YN +L ++ K
Sbjct: 381 SKVLDEKICEPDVFFYNVMLDSHCK 405
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 18/237 (7%)
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD +++ L + EKA L M++ C + Y++L+S Y+ + +
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+M+ YT ++ L K G + A + DE + + N+++
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV--- 323
+L+ A+ + +G P T+ G K ++++ RK++
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDE-----------ARKFLARM 176
Query: 324 ---PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD T N L + GD+D A +L + N G + Y+SL+ + K G++
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEV 233
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 108/288 (37%), Gaps = 21/288 (7%)
Query: 95 QLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
QL+K Q+L +K+ PD YN ++ + D A K E+ K P ++Y+
Sbjct: 25 QLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYT 84
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
+ K + A L EM + C N Y+ ++ DE ++ ++M
Sbjct: 85 NIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR 144
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRN 268
+ Y I L K ++A P P++ ++
Sbjct: 145 GYFPDVVTYNSFIKGLCKCDRVDEARKFLARM--------PVTPDVVSYTTVINGLCKSG 196
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRKWVPDH 326
L+ A +++ +G P T+ L G+ K G++E+ + +G V +
Sbjct: 197 DLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 256
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
L+ A L G I AE +LV + G + YN+ + KA
Sbjct: 257 SLLGA----LHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 22/238 (9%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
YN ML+ + Q+DK Q+ +++ + +VVT+N+ + + AE L +
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS--LYTNMGYK 200
PD+++Y TL K A +E K C + V YS+L++ ++ NM +
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515
Query: 201 DEVL------RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+L +W M+ +A+ + + V+L E + N + ISG
Sbjct: 516 AYLLFTKLDVALWNAMILGYAENGSGDLG--LKLFVELIESDVEPNARTFGKEISGK--- 570
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ L A ++R V G P L + K G +E+ F
Sbjct: 571 ---------LVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 176/421 (41%), Gaps = 53/421 (12%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+N+ R P +C++LL + VQN ++ +A + E+M G L Y M+N Y
Sbjct: 209 FDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCK 268
Query: 93 NGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D+ ++E++++ P+VVTYN + S D A+K + + I + +
Sbjct: 269 EGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRT 328
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L Y K E+A + M ++ + Y L+ Y G D+ LRI M+
Sbjct: 329 YTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML 388
Query: 212 SLFAKMNDAEYTCVISSLVKLG-----------------------------------EFE 236
+ KMN +I+ KLG +F
Sbjct: 389 KVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFI 448
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
KA + DE + N LL + +E A +N + +G+ P T+ L
Sbjct: 449 KAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLL 508
Query: 297 WGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
+ K G ++ + +K A+ K + + + + K+E+ + A+ + + ++
Sbjct: 509 DAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEK---LVQAQEIFLKMKEL 565
Query: 356 GHVSTEI-YNSLLRTYAKAGKMPLIIVERMQ-KDNVQMDAETQKVLKITSEMPVSEVSSI 413
G EI Y +L+ Y K G + VE ++ KD + D + ++EM S ++ +
Sbjct: 566 GFPPDEITYRTLIDGYCKVGNL----VEALKLKDMSERDGISS-----STEMYNSLITGV 616
Query: 414 F 414
F
Sbjct: 617 F 617
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 146/385 (37%), Gaps = 46/385 (11%)
Query: 2 ERRRPHGAQVRAQSYRQRVAQAQALQTRARE-NFFENLPDKMRGPDTCSALLHSYVQNKK 60
E R + ++ R ++ QA+ L E N F + + + G L+H+Y +
Sbjct: 324 ENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLF--VDEHVYG-----VLIHAYCTAGR 376
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNL 119
+A + + M + G + N ++N Y G ++K ++L +K N PD YN
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNT 436
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
L Q D A K E+ ++ ++Y+TL + E A M KR
Sbjct: 437 LLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
N V Y +LL + +G D + IWK +S + Y +I K+ + +A+
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556
Query: 240 NIYDEWESISGTGDPRVPNILLAAYIN---------------RNQLEMAESFYNRLVT-- 282
I+ + + + D L+ Y R+ + + YN L+T
Sbjct: 557 EIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGV 616
Query: 283 ------------------KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
+ + P T+ L G+ KG M+K + K I + P
Sbjct: 617 FRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMID--KGIAP 674
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLL 349
+ + + + L G ID A +L
Sbjct: 675 NIIIGSKIVSSLYRHGKIDEANLIL 699
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 127/338 (37%), Gaps = 47/338 (13%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P +L + + + A + + M +CG + N +L+ + NG+
Sbjct: 186 PTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGE--------- 236
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFL---ELKKTKIDPDWISYSTLTSLYIK 161
A KA L ++ I PD SY+ + + Y K
Sbjct: 237 ----------------------------AFKALLVYEQMIALGILPDIFSYTIMVNAYCK 268
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A +KEME+ C N V Y+SL+ Y ++G ++ M N
Sbjct: 269 EGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRT 328
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT +I K G+ E+AE + + D V +L+ AY +++ A + ++
Sbjct: 329 YTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML 388
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW--VPDHRLITAAYNKLEEQ 339
G+K L GY K G + K E + S++ W PD + +Q
Sbjct: 389 KVGLKMNTVICNSLINGYCKLGHVNKAAE----VLVSMKDWNLKPDSYGYNTLLDGFCKQ 444
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
D A L + N G + + YN+LL+ G +
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHV 482
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 129/329 (39%), Gaps = 42/329 (12%)
Query: 18 QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+++ QAQ + + +E F PD++ T L+ Y + EA L + G
Sbjct: 550 EKLVQAQEIFLKMKELGFP--PDEI----TYRTLIDGYCKVGNLVEALKLKDMSERDGIS 603
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKA 136
YN ++ + +L K+ +L E+K + SP+VVTY +A + + A A
Sbjct: 604 SSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNA 663
Query: 137 FLELKKTKIDPDWISYS-TLTSLYIKMEL--------------PEKAATTLKEMEKRTCR 181
+ ++ I P+ I S ++SLY ++ P A E+ K R
Sbjct: 664 YFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLR 723
Query: 182 --------------------KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
N + Y+ ++ D+V RI ++ ++
Sbjct: 724 HLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYT 783
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I + +G+ +A + D+ + + V N L+ L+ A +N+L
Sbjct: 784 YCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLA 843
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
KG+ P T+ L GY K G+ + LE
Sbjct: 844 RKGLSPTVVTYNTLIDGYCKGGRTTEALE 872
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +L+H+ K EA L + M G + + YN ++N +G LD+ ++
Sbjct: 779 PDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRL 838
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT-SLYI 160
+L +K SP VVTYN + A + ++++ I P I+YSTL LY+
Sbjct: 839 FNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYM 898
Query: 161 KMELPEKAATTLKEMEK 177
+ + E++ L EM K
Sbjct: 899 EGK-SEQSVGLLNEMMK 914
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 120/289 (41%), Gaps = 13/289 (4%)
Query: 88 NLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
N YI++ D++ + +E + SP V +++ L A + + A F + K P
Sbjct: 164 NNYIASAVWDELVSVYREF--SFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVP 219
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
S ++L S ++ KA ++M + +Y+ +++ Y G DE
Sbjct: 220 SLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFV 279
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
K+M + N Y +I V LG+ A+ + + R +L+ Y R
Sbjct: 280 KEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKR 339
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA---IGSVRKWVP 324
Q+E AE ++ K + + +L Y G+++ L + A +G V
Sbjct: 340 GQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR-IRDAMLKVGLKMNTVI 398
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
+ LI Y KL G ++ A +LV++++ + YN+LL + K
Sbjct: 399 CNSLIN-GYCKL---GHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCK 443
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 9/337 (2%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY--ISNGQLDKVP 100
PD +AL+ ++ + + +A A+ +M G + YN +L++Y I+ D V
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV- 234
Query: 101 QMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
++ +K + P D TYN ++ C + A K F E++ +PD +++++L +Y
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K + ++A LKEME C + V Y+SL+S Y G E + ++M + +
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +IS L + G+ + A YDE + N L+ + R + + ++
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
L + G P TW L + + G +V FK+ S +VP+ + +
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKS--GYVPERDTYVSLISSYSRC 472
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
G D + + + AG + YN++L A+ G+
Sbjct: 473 GLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGR 509
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 156/330 (47%), Gaps = 4/330 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ SYV++ EA L E+M G + Y +++ G++D E+
Sbjct: 321 TYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEM 380
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N P++ TYN + + F +L+ PD ++++TL +++ + L
Sbjct: 381 LRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLD 440
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ + KEM+K R Y SL+S Y+ G D+ + I+K+M+ + + Y V
Sbjct: 441 SEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAV 500
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+S+L + G +E+AE ++ E E++ D + LL AY N +L+ ++ + + I
Sbjct: 501 LSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKI 560
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + + L K + + + F + +G R+ D ++ A + + +
Sbjct: 561 ESHHGLVKTLVLVNSKVNNLSETEKAFLE-LGR-RRCSLDINVLNAMVSVYGKNRMVKKV 618
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
E +L ++ + ++ST YNSL+ Y++ G
Sbjct: 619 EEILSLMKGSSINLSTATYNSLMHMYSRLG 648
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 153/382 (40%), Gaps = 44/382 (11%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ A ++ R + + A+ R F +PD + T + LL + QN +E
Sbjct: 392 YNALIKLHGVRGKFPEMMAVFDDLRSAGF--VPDVV----TWNTLLAVFGQNGLDSEVSG 445
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACA 125
+ ++M + G++ Y +++ Y G D+ ++ + ++ PD+ TYN L+A A
Sbjct: 446 VFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALA 505
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI------------------KMELPEK 167
E AEK F E++ PD +SYS+L Y K+E
Sbjct: 506 RGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHG 565
Query: 168 AATTLK-----------------EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
TL E+ +R C + ++++S+Y +V I M
Sbjct: 566 LVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLM 625
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ A Y ++ +LG+ EK ENI E +S D N ++ AY + Q+
Sbjct: 626 KGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQM 685
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A ++ + + G+ P T+ + Y+ E+ ++ + + R P+ R
Sbjct: 686 KEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMV--TRGCKPNERTYN 743
Query: 331 AAYNKLEEQGDIDGAEHLLVTL 352
+ + G I A+ L L
Sbjct: 744 SILQEYCRHGKIADAKSFLSNL 765
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 113/281 (40%), Gaps = 20/281 (7%)
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
+PD +Y+ L S + + A + M + V Y+ +L +Y+ +
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVP----- 229
Query: 206 IWKKMMSLFAKM-NDA------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
WK +++L M ND Y +IS + +++A ++DE + D N
Sbjct: 230 -WKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFN 288
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LL Y + A + G P T+ L Y+K G +++ E ++
Sbjct: 289 SLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEM--E 346
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKMP 377
V+ PD T + L+ G ID A LRN + YN+L++ + GK P
Sbjct: 347 VKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFP 406
Query: 378 --LIIVERMQKDNVQMDAET-QKVLKITSEMPV-SEVSSIF 414
+ + + ++ D T +L + + + SEVS +F
Sbjct: 407 EMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVF 447
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 147/331 (44%), Gaps = 6/331 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK--VPQMLQEL 106
+A++ Y ++ + +A L++ M + G + +N ++N +G L +L E+
Sbjct: 225 NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEV 284
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PDV+TYN ++AC+ ++ E A F ++ ++ PD +Y+ + S++ +
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKA 344
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A +E+ ++ + + Y+SLL + G D+V ++++ K N+ Y +
Sbjct: 345 EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTM 404
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G + A +YDE ++ T D +++ + N++ A + G+
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGL 464
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP + L Y K G+ F I S K PD + GD +
Sbjct: 465 KPTLIAFSALICAYAKGGRRADAENTFDCMIASGVK--PDRLAYLVMLDVFARSGDTEKM 522
Query: 346 EHLLVTLRNAGH-VSTEIYNSLLRTYAKAGK 375
L + N + ++Y LL AK K
Sbjct: 523 LCLYRKMMNDNYRPDDDMYQVLLVALAKEDK 553
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L +K PD T ++LL+++ + + E E++ + GF K + YN M+++
Sbjct: 348 ERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHM 407
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+LD + E++ +PD VTY + + + N A K ++ + P
Sbjct: 408 YGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPT 467
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I++S L Y K A T M + +R+AY +L ++ G +++L +++
Sbjct: 468 LIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYR 527
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
KMM+ + +D Y ++ +L K + E+ E + + E
Sbjct: 528 KMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 108/243 (44%), Gaps = 3/243 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE++ PD T +A++ + + K+ EAE L ++ E GF+ + YN +L +
Sbjct: 316 FEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAK 375
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +DKV ++L K + +TYN + + A + E++ PD ++
Sbjct: 376 EGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVT 435
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ + KM +A L++M + +A+S+L+ Y G + + + M+
Sbjct: 436 YTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMI 495
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ K + Y ++ + G+ EK +Y + + + D + +LL A ++ E
Sbjct: 496 ASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCE 555
Query: 272 MAE 274
E
Sbjct: 556 EIE 558
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 133/314 (42%), Gaps = 17/314 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
LL ++ + E + M G+L Y M++L + + V M+ E++
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD+ N L + + + + + + + ++PD +Y+TL +Y + PE+
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T L EM KR +Y SLL+ +++ +I+++M S ++N + Y ++
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G KAEN+ + +IL+ +Y Q AE+ N L + ++
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVST 1095
Query: 290 TTWELLTWGYLKKGQME----KVLECFKKAIGSVRKWVPDHRLITA---AYNKLEEQGDI 342
+ + YLK G K+LE + + PDH++ T A + E+ D
Sbjct: 1096 LPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVE------PDHQVWTCFIRAASLCEQTAD- 1148
Query: 343 DGAEHLLVTLRNAG 356
A LL +L++ G
Sbjct: 1149 --AILLLKSLQDCG 1160
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 117/292 (40%), Gaps = 36/292 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+AL+H+Y ++ +A A+ + M + G L N M+ I +G+LD++ +++EL+
Sbjct: 784 NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQD 843
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N T L L A A D K + +K P+ Y ++ SL
Sbjct: 844 MNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRD 903
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL-------------- 213
+ EME + + ++LL++YT G D ++++ ++
Sbjct: 904 VELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIV 963
Query: 214 -----------FAKMNDA----------EYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
F +N+ Y ++++ K E+A+ I++E S S
Sbjct: 964 MYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQL 1023
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ + ++++ Y N AE+ + GI+P T +L Y GQ
Sbjct: 1024 NRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQ 1075
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L++A + LE A + + ++ +P T+ + + + G+ E+ F++ +
Sbjct: 297 NTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVE 356
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ ++PD + ++G++D EH L AG EI YN+++ Y K G++
Sbjct: 357 --KGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 377 PLII--VERMQKDNVQMDAETQKVL 399
L + + M+ DA T V+
Sbjct: 415 DLAVGLYDEMRAMGCTPDAVTYTVM 439
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 140/335 (41%), Gaps = 21/335 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SAL+ +Y + + A+AE + M G L Y ML+++ +G +K+ + +++
Sbjct: 472 SALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMN 531
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N PD Y + L A A ++ E E+ +++ ++ ++++ IK +
Sbjct: 532 DNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLC----RMNLGIISTMLIKARCVSQ 587
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A LK+ + + + + S+++ Y +E L + + + + D C
Sbjct: 588 GAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISEC--- 644
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDP----RVPNILLAAYINRNQLEMAESFYNRLVTK 283
S++ L + + + Y+++ P + L+ I A + +
Sbjct: 645 SIMLLCRKQTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEFFSEACQVFCDMQFI 704
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLE--EQ 339
GI+ + +E + Y K G E A+ G + +I AY K++ +Q
Sbjct: 705 GIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQ 764
Query: 340 GDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+I L+ LR A + I+N+L+ YA++G
Sbjct: 765 AEI-----LVKGLRQASGIDRRIWNALIHAYAESG 794
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 151/339 (44%), Gaps = 11/339 (3%)
Query: 44 GPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS-NGQLDKVP 100
PD +AL+ ++ + + +A A+ ++M + G + YN + + Y + +V
Sbjct: 181 APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVV 240
Query: 101 QMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
++ +K++ D TYN ++ C + A + F E+K +PD +++++L +Y
Sbjct: 241 ALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVY 300
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K E+A LK ME C + V Y+SL+S Y G +E L + ++M K +
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +IS L ++G+ + A Y E + + N L+ + R + + ++
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLE 337
L + G P TW L + + G +V FK K G ++P+ + +
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAG----YIPERDTYVSLISSYS 476
Query: 338 EQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
G D A + + AG + YN++L A+ G+
Sbjct: 477 RCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 515
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 171/377 (45%), Gaps = 51/377 (13%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T ++LL Y + +K EA ++++M G + YN +++ Y+ +G L++
Sbjct: 288 PDKV----TFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEE 343
Query: 99 VPQMLQELK-KNTSPDVVTYNLWL----------AACASQND------------------ 129
++ QE++ + PDVVTY + AA A+ ++
Sbjct: 344 ALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIK 403
Query: 130 ------KETAEKA-FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
K T A F +L+ PD ++++TL S++ + L + + KEM+K
Sbjct: 404 LHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIP 463
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
R Y SL+S Y+ G D+ + I+K+M+ + + Y V+S+L + G +E+AE ++
Sbjct: 464 ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLF 523
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E D + LL AY N +L+ ++ + + I+ W + T +
Sbjct: 524 AEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIE--RHNWLVKTLVLVNN 581
Query: 303 -----GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
+ EK + ++ S+ V + + NK+ ++ + E L + + N+ +
Sbjct: 582 KVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVE----EVLSLMMENSIN 637
Query: 358 VSTEIYNSLLRTYAKAG 374
S YNSL+ Y++ G
Sbjct: 638 HSAATYNSLMHMYSRLG 654
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 142/356 (39%), Gaps = 40/356 (11%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F++L PD T + LL + QN +E + ++M + G++ Y +++ Y
Sbjct: 418 FDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 477
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G D+ ++ + + + PD+ TYN L+A A E AEK F E+ PD +S
Sbjct: 478 CGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELS 537
Query: 152 YSTLTSLYIKMELPEKAAT-----------------------------------TLKEME 176
YS+L Y + +K T +E+
Sbjct: 538 YSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELR 597
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
+R C + ++++S+Y +V + MM + A Y ++ +LG+ E
Sbjct: 598 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCE 657
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
K E+I E +S D N ++ AY + Q++ A ++ + G+KP T+ +
Sbjct: 658 KCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFI 717
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
Y+ E+ ++ + + + P+ R + G + A+ L L
Sbjct: 718 KSYVANIMFEEAIDLVRYLV--TQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNL 771
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 6/272 (2%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ +PD Y ++A + A F + + P ++Y+ + Y KM +P
Sbjct: 176 LEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVP 235
Query: 166 EKAATTLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
K L + M++ ++R Y++L+S G E +++ +M + + + +
Sbjct: 236 WKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNS 295
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ K + E+A + E+ T N L++AY+ LE A + +G
Sbjct: 296 LLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG 355
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE-QGDID 343
+KP T+ L G + G+++ L + + VR + A KL +G
Sbjct: 356 MKPDVVTYTTLISGLDRVGKIDAALATYSEM---VRNGCSPNLCTYNALIKLHGVRGKFT 412
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ LR+AG+V + +N+LL + + G
Sbjct: 413 EMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNG 444
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 163/359 (45%), Gaps = 11/359 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ LL S V+ + ++ + E M + G ++ +N + G+++ Q+ ++
Sbjct: 281 TCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 339
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K SP+VVTYN + + + A + ++ K ++ I+YS L + +K+E
Sbjct: 340 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 399
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + LKE ++ N V Y++L+ Y MG + LRI M+S N +
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 459
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G+ E+AE I +E S + +P ++ ++ E A F ++ + +
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDID 343
+P L G K+G+ +E + + + G V + LI + L + G++
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI----HGLCKTGNMQ 575
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
A LL + G V +I YN+L+ K GK+ + M K ++ D T +L
Sbjct: 576 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 36/297 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H + EA L++KM E GF+ + YN +++ G++++ ++ E+
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ PD TYNL + + A + E K + P+ +Y + Y K +
Sbjct: 620 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 679
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------------- 210
E+ E+ + N V Y++L+ Y G E ++ M
Sbjct: 680 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 739
Query: 211 ---MSLFAKMNDAE-----------------YTCVISSLVKLGEFEKAENIYDEWESISG 250
M +M DA+ YT +I KLG+ +K N+ E S
Sbjct: 740 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 799
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ +++ Y ++ A + +V KGI P T+ +LT G+ K+G++E+
Sbjct: 800 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 124/308 (40%), Gaps = 9/308 (2%)
Query: 97 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
D V + L+K ++VT N + + + A + ++ + D I+Y+TL
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
S K E+ EM K+ + Y+ L+ +G DE + +W + S
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N Y +I K + E+ E ++ E + + + V N L+ AY A
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYN 334
++ + +KGI P T+ L G G+ME K I +RK +P+ TA
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA----KCLIDEMRKEGLLPNVVCYTALIG 776
Query: 335 KLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQM 391
+ G +D ++L + + H + Y ++ Y+K+G M ++ M +
Sbjct: 777 GYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVP 836
Query: 392 DAETQKVL 399
D T VL
Sbjct: 837 DTVTYNVL 844
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++ Y + K E E L ++ + YN ++ Y NG + ++ ++
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K P TY+ + + E A+ E++K + P+ + Y+ L Y K+
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 784
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+K L+EM N++ Y+ ++ Y+ G ++ +M+ + Y +
Sbjct: 785 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 844
Query: 226 ISSLVKLGEFEKAE 239
+ K G+ E+ +
Sbjct: 845 TNGFCKEGKIEEGK 858
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 163/359 (45%), Gaps = 11/359 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ LL S V+ + ++ + E M + G ++ +N + G+++ Q+ ++
Sbjct: 214 TCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 272
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K SP+VVTYN + + + A + ++ K ++ I+YS L + +K+E
Sbjct: 273 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 332
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + LKE ++ N V Y++L+ Y MG + LRI M+S N +
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G+ E+AE I +E S + +P ++ ++ E A F ++ + +
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDID 343
+P L G K+G+ +E + + + G V + LI + L + G++
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI----HGLCKTGNMQ 508
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
A LL + G V +I YN+L+ K GK+ + M K ++ D T +L
Sbjct: 509 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 36/297 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H + EA L++KM E GF+ + YN +++ G++++ ++ E+
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ PD TYNL + + A + E K + P+ +Y + Y K +
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------------- 210
E+ E+ + N V Y++L+ Y G E ++ M
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672
Query: 211 ---MSLFAKMNDAE-----------------YTCVISSLVKLGEFEKAENIYDEWESISG 250
M +M DA+ YT +I KLG+ +K N+ E S
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ +++ Y ++ A + +V KGI P T+ +LT G+ K+G++E+
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 128/344 (37%), Gaps = 46/344 (13%)
Query: 97 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
D V + L+K ++VT N + + + A + ++ + D I+Y+TL
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
S K E+ EM K+ + Y+ L+ +G DE + +W + S
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 593
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N Y +I K + E+ E ++ E + + + V N L+ AY A
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653
Query: 277 YNRLVTKGIKP--------------------------------------CYTTWELLTWG 298
++ + +KGI P CYT L G
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA---LIGG 710
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV 358
Y K GQM+KV+ ++ S P+ T + + GD+ A LL + G V
Sbjct: 711 YCKLGQMDKVVNVLQEM--SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV 768
Query: 359 -STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
T YN L + K GK+ I + M ++ + +D T L
Sbjct: 769 PDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTL 812
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 160/368 (43%), Gaps = 13/368 (3%)
Query: 12 RAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM 71
R S + A+ + AR++ + P +C+ L+ +++ EA + KM
Sbjct: 139 RLCSRGKLTVAARLIDVMARKSQIPHFP-------SCTNLIRGFIRKGLVDEACKTLNKM 191
Query: 72 SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDK 130
G + + YN ++ NG+L +++++ SPD +TYN + + +
Sbjct: 192 VMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNF 251
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A + + + P I+Y+ L L K +A L++M C + V Y+SL
Sbjct: 252 NQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSL 311
Query: 191 LSLYTNMG-YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
++L + G Y+D L I ++S + N Y +I SL+ G +++ ++I S
Sbjct: 312 VNLTSKQGKYEDTALVIL-NLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETS 370
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
NILL L+ A SFY+ +VT+ P T+ L G K+G +++ +
Sbjct: 371 SPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGI 430
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLR 368
+ +G+ P + L G ++ A+ L + + G + EI ++SL
Sbjct: 431 QLLNLLVGT--SCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTW 488
Query: 369 TYAKAGKM 376
+ +A ++
Sbjct: 489 GFCRADQL 496
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 129/322 (40%), Gaps = 47/322 (14%)
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNL 119
+A A ++E M+ G + YN ++NL G+ D +L L P+ VTYN
Sbjct: 286 AARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNT 345
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ + + + + + +T P ++Y+ L + K L ++A + M
Sbjct: 346 LIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTEN 405
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C + + Y++LLS G+ DE +++ ++ Y VI L +LG E A+
Sbjct: 406 CSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAK 465
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
+YDE +V KGI P T LTWG+
Sbjct: 466 ELYDE-----------------------------------MVDKGIIPDEITHSSLTWGF 490
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN----KLEEQGDIDGAEHLL-VTLRN 354
+ Q+E+ E K+ + + R+ AY L Q +D A +L + ++
Sbjct: 491 CRADQLEEATELLKEM------SMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKG 544
Query: 355 AGHVSTEIYNSLLRTYAKAGKM 376
+ IY++L++ A G +
Sbjct: 545 QCNPDERIYSALIKAVADGGML 566
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 1/236 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+HS + + E + +++ M+E + YN +LN +G LD+ +
Sbjct: 342 TYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTM 401
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N SPD++TYN L+ + + + L T P ++Y+ + ++
Sbjct: 402 VTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSM 461
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A EM + + + +SSL + +E + K+M ++ + Y CV
Sbjct: 462 ESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCV 521
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
I L + + + A + D D R+ + L+ A + L+ A + L+
Sbjct: 522 ILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLI 577
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 149/334 (44%), Gaps = 13/334 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S+L+ Y + + A +++++M+E + YN + + G+ + + ++
Sbjct: 520 SSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIEL 579
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+PD VTYN + Q E A E+K + P+ ++Y+ L K EK
Sbjct: 580 GLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKV 639
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ L EM + + LL Y+ D +L+I KK++ + +N Y +I+
Sbjct: 640 ISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITV 699
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L +LG +KA + E + D N L+ Y + +E A + Y++++ GI P
Sbjct: 700 LCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPN 759
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPD---HRLITAAYNKLEEQGDID 343
TT+ L G G M K + +R+ VP+ + ++ + + ++ + D
Sbjct: 760 ITTYNALLEGLSTNGLMRDA----DKLVSEMRERGLVPNATTYNILVSGHGRVGNKRD-- 813
Query: 344 GAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+ L + G + +T YN L++ YAKAGKM
Sbjct: 814 -SIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKM 846
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 6/282 (2%)
Query: 29 RARENFF---ENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
R ++FF E + PD TCS++L+ ++ K EA L+ +M G + Y
Sbjct: 250 RGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSY 309
Query: 84 NHMLNLYISNGQ-LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+++ + +G+ ++ Q + + S D+V + + AE+ F + K
Sbjct: 310 TTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILK 369
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ P+ ++Y+ L + K+ E A T L++MEK N V +SS+++ Y G ++
Sbjct: 370 LNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNK 429
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ + +KM+ + N Y ++ + G+ E A Y E +S + + +ILL
Sbjct: 430 AVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLN 489
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
++ A+S +++KGI + L GY K+G
Sbjct: 490 NLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGN 531
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 140/332 (42%), Gaps = 17/332 (5%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++++++Y K+ A L+ +M G + + YN ++ G ++KV +
Sbjct: 583 PDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISV 642
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E L P + + L A + + + +L ++ + + Y+TL ++ +
Sbjct: 643 LHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCR 702
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + +KA L EM + + V Y++L+ Y + ++ + +M+ N
Sbjct: 703 LGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITT 762
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y ++ L G A+ + E + NIL++ + + Y ++
Sbjct: 763 YNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMI 822
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEE 338
TKG P T+ +L Y K G+M + E + + R +P+ + ++ + KL
Sbjct: 823 TKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEML--TRGRIPNSSTYDVLICGWCKLSC 880
Query: 339 QGDIDG---------AEHLLVTLRNAGHVSTE 361
Q ++D A+ LL + GHV +E
Sbjct: 881 QPEMDRLLKLSYQNEAKKLLREMCEKGHVPSE 912
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 137/327 (41%), Gaps = 28/327 (8%)
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q + PDVVT + L A E+ +DP+ +SY+T+ S +K
Sbjct: 261 QMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSG 320
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A +M R + V ++++ G E +++ ++ L N YT
Sbjct: 321 RVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYT 380
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYN 278
++ K+G+ E AE + + E + +PN+ ++ Y + L A
Sbjct: 381 ALLDGHCKVGDVEFAETVLQKMEK-----EHVLPNVVTFSSIINGYAKKGMLNKAVEVLR 435
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV--PDHRLITAAYNKL 336
++V I P + +L GY + GQ E +K+ ++ W ++ + N L
Sbjct: 436 KMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKE----MKSWGLEENNIIFDILLNNL 491
Query: 337 EEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK--MPLIIVERMQKDNVQMD- 392
+ G + A+ L+ + + G ++ Y+SL+ Y K G L +V+ M + ++Q D
Sbjct: 492 KRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDV 551
Query: 393 ----AETQKVLKITSEMPVSEVSSIFS 415
A T+ +L++ P S+FS
Sbjct: 552 VAYNALTKGLLRLGKYEP----KSVFS 574
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 73/396 (18%), Positives = 148/396 (37%), Gaps = 61/396 (15%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL+ + + ++ + L +M CG + N +++ G L L +N+
Sbjct: 16 LLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYL----RNS 71
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
D VTYN + + + E+ K + D ++ + L Y ++ L + A
Sbjct: 72 VFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEW 131
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ + + + ++L+ Y +G L + + K + Y ++++
Sbjct: 132 IMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFC 191
Query: 231 KLGEFEKAENIYDEW-----------------ESISGTGD--PRVPN--ILLAAYINRNQ 269
K G+ KAE++ +E E+ G D P V L+AAY
Sbjct: 192 KRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRG 251
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME----------------------- 306
++ S Y +++ G+ P T + +G + G++
Sbjct: 252 IDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTT 311
Query: 307 ---------KVLECFK-KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+V+E F ++ VR D L T + L + G AE + T+
Sbjct: 312 IISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLN 371
Query: 357 HVSTEI-YNSLLRTYAKAGKMPL--IIVERMQKDNV 389
V + Y +LL + K G + ++++M+K++V
Sbjct: 372 LVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHV 407
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 47 TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYI----SNGQLDKVPQ 101
T + LL +K++++A + ++ +M+E G + YN++L S L+ +
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M + + PDVV+YN L + D + A + E+ I PD ++YS++ + K
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +KA L M K + + Y+S+L Y + G E + KKM S + N
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +++ L K G +A I+D D LL Y + L + + +V
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
GI+P + + +L Y K+ ++++ + F K
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 1/273 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S+L++ +N +S EA + + M++ G Y +L Y + G L ++ +L +
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N PD +N+ + A A Q + A F ++++ ++P+ + Y T+ + K
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A ++M N + Y+SL+ D+ + +M+ +N + +
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I S K G ++E ++D I D N L+ +++ A +V+ G+
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
KP T+ L GY + +M+ L FK+ + S
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 134/312 (42%), Gaps = 5/312 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE + D+ P+ ++L+H K +AE L+ +M + G + +N +++ +
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++ + ++ + + PD++TYN + C + A K + + PD +
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y TL + Y ++ + A KEM N + Y+ +L + ++ +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ + Y ++ L K ++A ++ + R NI++ A + ++
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A+ + G+ P T+ L+ +++G +E++ + F D R++
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM--EENGCSADSRMLN 730
Query: 331 AAYNKLEEQGDI 342
+ KL ++GDI
Sbjct: 731 SIVRKLLQRGDI 742
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 125/306 (40%), Gaps = 40/306 (13%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T S+++ + + + +A ++ M + G + + YN +L+ Y S+GQ
Sbjct: 233 LPDVV----TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288
Query: 98 KVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST-- 154
+ L++++ + P+VVTY+ + A K F + K ++PD +Y T
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348
Query: 155 ---------------------------------LTSLYIKMELPEKAATTLKEMEKRTCR 181
L Y K E ++A +M +
Sbjct: 349 QGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLN 408
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N V Y +++ + G D+ + +++M+ N YT +I L +++KAE +
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
E + N ++ ++ ++ +E ++ +V G+KP T+ L G
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 302 KGQMEK 307
G+M++
Sbjct: 529 AGKMDE 534
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 147/331 (44%), Gaps = 6/331 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK--VPQMLQEL 106
+A++ Y ++ + +A L++ M + G + +N ++N +G L +L E+
Sbjct: 225 NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEV 284
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PDV+TYN ++AC+ ++ E A F ++ ++ PD +Y+ + S++ +
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKA 344
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A +E+ ++ + + Y+SLL + G D+V ++++ K N+ Y +
Sbjct: 345 EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTM 404
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G + A +YDE ++ T D +++ + N++ A + G+
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGL 464
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP + L Y K G+ F I S K PD + GD +
Sbjct: 465 KPTLIAFSALICAYAKGGRRADAENTFDCMIASGVK--PDRLAYLVMLDVFARSGDTEKM 522
Query: 346 EHLLVTLRNAGH-VSTEIYNSLLRTYAKAGK 375
L + N + ++Y LL AK K
Sbjct: 523 LCLYRKMMNDNYRPDDDMYQVLLVALAKEDK 553
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F L +K PD T ++LL+++ + + E E++ + GF K + YN M+++
Sbjct: 348 ERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHM 407
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+LD + E++ +PD VTY + + + N A K ++ + P
Sbjct: 408 YGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPT 467
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I++S L Y K A T M + +R+AY +L ++ G +++L +++
Sbjct: 468 LIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYR 527
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
KMM+ + +D Y ++ +L K + E+ E + + E
Sbjct: 528 KMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 108/243 (44%), Gaps = 3/243 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE++ PD T +A++ + + K+ EAE L ++ E GF+ + YN +L +
Sbjct: 316 FEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAK 375
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +DKV ++L K + +TYN + + A + E++ PD ++
Sbjct: 376 EGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVT 435
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ + KM +A L++M + +A+S+L+ Y G + + + M+
Sbjct: 436 YTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMI 495
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ K + Y ++ + G+ EK +Y + + + D + +LL A ++ E
Sbjct: 496 ASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCE 555
Query: 272 MAE 274
E
Sbjct: 556 EIE 558
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 133/314 (42%), Gaps = 17/314 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
LL ++ + E + M G+L Y M++L + + V M+ E++
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD+ N L + + + + + + + ++PD +Y+TL +Y + PE+
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T L EM KR +Y SLL+ +++ +I+++M S ++N + Y ++
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G KAEN+ + +IL+ +Y Q AE+ N L + ++
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVST 1095
Query: 290 TTWELLTWGYLKKGQME----KVLECFKKAIGSVRKWVPDHRLITA---AYNKLEEQGDI 342
+ + YLK G K+LE + + PDH++ T A + E+ D
Sbjct: 1096 LPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVE------PDHQVWTCFIRAASLCEQTAD- 1148
Query: 343 DGAEHLLVTLRNAG 356
A LL +L++ G
Sbjct: 1149 --AILLLKSLQDCG 1160
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 117/292 (40%), Gaps = 36/292 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+AL+H+Y ++ +A A+ + M + G L N M+ I +G+LD++ +++EL+
Sbjct: 784 NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQD 843
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N T L L A A D K + +K P+ Y ++ SL
Sbjct: 844 MNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRD 903
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL-------------- 213
+ EME + + ++LL++YT G D ++++ ++
Sbjct: 904 VELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIV 963
Query: 214 -----------FAKMNDA----------EYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
F +N+ Y ++++ K E+A+ I++E S S
Sbjct: 964 MYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQL 1023
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ + ++++ Y N AE+ + GI+P T +L Y GQ
Sbjct: 1024 NRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQ 1075
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L++A + LE A + + ++ +P T+ + + + G+ E+ F++ +
Sbjct: 297 NTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVE 356
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ ++PD + ++G++D EH L AG EI YN+++ Y K G++
Sbjct: 357 --KGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 377 PLII--VERMQKDNVQMDAETQKVL 399
L + + M+ DA T V+
Sbjct: 415 DLAVGLYDEMRAMGCTPDAVTYTVM 439
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 137/332 (41%), Gaps = 15/332 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SAL+ +Y + + A+AE + M G L Y ML+++ +G +K+ + +++
Sbjct: 472 SALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMN 531
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N PD Y + L A A ++ E E+ +++ ++ ++++ IK +
Sbjct: 532 DNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLC----RMNLGIISTMLIKARCVSQ 587
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A LK+ + + + + S+++ Y +E L + + + + D C I
Sbjct: 588 GAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIM 647
Query: 228 SLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L + A Y + + G + + L+ I A + + GI+
Sbjct: 648 LLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIE 707
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLE--EQGDI 342
+ +E + Y K G E A+ G + +I AY K++ +Q
Sbjct: 708 ASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQ--- 764
Query: 343 DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
AE L+ LR A + I+N+L+ YA++G
Sbjct: 765 --AEILVKGLRQASGIDRRIWNALIHAYAESG 794
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 151/357 (42%), Gaps = 6/357 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + + +A+ L+++M++ G P YN ++ Y G L + + +E+
Sbjct: 274 TFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM 333
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ SP V ++N + + A + ++ K + PD ISY+TL + ++
Sbjct: 334 VTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNI 393
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L E+ R N V Y++L+ +G + L++ + M++ + YT +
Sbjct: 394 GEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ KLG A+ +DE + D + + A ++TKG
Sbjct: 454 VNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGF 513
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + G K G +E+ E +K I VPDH T+ + E G +
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD--GHVPDHVTYTSFMHAHMENGHLREG 571
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ + + G T + Y L+ +A G++ + MQ+ V + T VL
Sbjct: 572 REIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVL 628
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWL 121
EA L++KM G + + Y ++ ++ NG L + ++ + L + +P VVTY + +
Sbjct: 535 EAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI 594
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
A A + A FLE+++ + P+ I+Y+ L + + K+ ++A EM+++
Sbjct: 595 HAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIF 654
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
N+ Y+ L++ NMG E LR++ +M+
Sbjct: 655 PNKYTYTILINENCNMGKWQEALRLYAQMLG 685
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L++ + + EA L++++ + YN +++ G L+ ++
Sbjct: 375 PDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKL 434
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ + + PDVVTY + + + A++ F E+ + PD +Y+ +K
Sbjct: 435 KEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELK 494
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ KA +EM + + + Y+ ++ +G +E + +KM+ +
Sbjct: 495 LGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVT 554
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT + + ++ G + I+ + S T +L+ A+ +L+ A +++ +
Sbjct: 555 YTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQ 614
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
KG+ P T+ +L G+ K +M++ + F
Sbjct: 615 EKGVVPNVITYNVLINGFCKVRKMDQACKFF 645
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 15/272 (5%)
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F ++ + + PD + + + + L KA + M + R Y+++L +
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G L + KM ++ + +I+ L K GE ++A+ + E P
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
N L+ Y + L A + + +VT+G+ P + + +G+ K+G+M +
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368
Query: 316 IGSVRKWVPDHRLITAAYNKLE----EQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRT 369
+ + +PD +YN L G+I A LL LR ++S I YN+L+
Sbjct: 369 LK--KNLMPD----IISYNTLIYGFCRLGNIGEAFILLDELRFR-NLSFNIVTYNTLIDG 421
Query: 370 YAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ G + L + E M + D T VL
Sbjct: 422 LCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 2/243 (0%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L +PD Y + D A K E+ PD I+Y+ + K+
Sbjct: 474 LHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNL 533
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A L++M + + V Y+S + + G+ E I+ M+S YT +
Sbjct: 534 EEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVL 593
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + G + A + E + + N+L+ + +++ A F+ + KGI
Sbjct: 594 IHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGI 653
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ +L G+ ++ L + + +G ++ PD A KL++ +
Sbjct: 654 FPNKYTYTILINENCNMGKWQEALRLYAQMLG--KRIRPDSCTHGALLKKLDKDYKVQAV 711
Query: 346 EHL 348
+ +
Sbjct: 712 QFI 714
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 118/334 (35%), Gaps = 69/334 (20%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P V TYN L + + + A ++++ P ++++ L + K ++A
Sbjct: 235 PTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGL 294
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF----------------- 214
++EM K R + Y+ L+ Y G E L +W++M++
Sbjct: 295 IQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCK 354
Query: 215 -AKMNDA-----------------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
KM+DA Y +I +LG +A + DE + + +
Sbjct: 355 EGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVT 414
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--- 313
N L+ LE A ++ +GI P T+ +L G K G M E F
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEML 474
Query: 314 -------------KAIGSV-----------------RKWVPDHRLITAAYNKLEEQGDID 343
+ +G + + + PD N L + G+++
Sbjct: 475 HVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLE 534
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A LL + GHV + Y S + + + G +
Sbjct: 535 EAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHL 568
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 12/304 (3%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPDTCSALLHSYV-----------QNKKSAEAEALME 69
A ++ +Q E F + + P T ++ S + ++ + ++AE
Sbjct: 127 AYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFR 186
Query: 70 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQN 128
M + G L + M+N+Y DK + + ++K P++ TY + A A +
Sbjct: 187 DMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREG 246
Query: 129 DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYS 188
+ AE+ F EL+ PD +Y+ L Y + E P A + M + R ++V+Y+
Sbjct: 247 NCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYN 306
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
L+ + G + ++ M K + ++SS K G+ +AE + E E+
Sbjct: 307 ILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENS 366
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D + N LL+AY N +++ ES +V+ KP +T L Y + G +EK
Sbjct: 367 GVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKA 426
Query: 309 LECF 312
E F
Sbjct: 427 EEVF 430
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 147/355 (41%), Gaps = 56/355 (15%)
Query: 38 LPDKMRGPDT-C-SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
L M PD C + L+ +Y ++K+ EAE M + L +N +L Y Q
Sbjct: 74 LQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQ 133
Query: 96 LDKVPQMLQELKK-NTSPDVV---------TYNLWLAACASQNDKETAEKAFLELKKTKI 145
L+K ++ E+K+ N SP V TYN +L AE F +++K I
Sbjct: 134 LEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGI 193
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P +++ + ++Y K +KA + M K C N Y++L++ + G
Sbjct: 194 LPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREG------- 246
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
CV +AE I+ E +S+ D N LL AY
Sbjct: 247 -----------------NCV-----------RAEEIFAELQSVGFIPDVYTYNALLEAYS 278
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGSVRKW 322
A+ + +V G++P ++ +L + + G + V + K+A +
Sbjct: 279 RGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEA--GFKPT 336
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ H L+ ++Y K G + AE L+ + N+G T ++NSLL Y +G++
Sbjct: 337 MKSHMLLLSSYAK---AGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRI 388
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
++ F ++ + P+ T +AL++++ + AE + ++ GF+ YN +L
Sbjct: 217 DDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEA 276
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y ++ Q + + PD V+YN+ + A A+ + +K+ P
Sbjct: 277 YSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPT 336
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
S+ L S Y K +A ++E+E + + ++SLLS Y N G DE+ + +
Sbjct: 337 MKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLE 396
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+S AK + + +I++ + G EKAE +++ ES T D L+ AY R
Sbjct: 397 SMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRK 456
Query: 269 QLEMAESFYNRLVTKGIKP 287
S + ++V G P
Sbjct: 457 LFRKCVSIFQKMVKAGCIP 475
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 123/284 (43%), Gaps = 9/284 (3%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQM 102
+T + +++ Y + S +A+ L M + CP Y ++N + G + ++
Sbjct: 198 NTFTIMINIYGKAYYSDKADDLFRSMRKA---LCPPNLYTYTALMNAHAREGNCVRAEEI 254
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
EL+ PDV TYN L A + A++ F + + + PD +SY+ L + +
Sbjct: 255 FAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGR 314
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
L A M++ + ++ LLS Y G E R+ +++ + K +
Sbjct: 315 AGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFM 374
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++S+ G ++ E++ + S D N L+ AY +E AE +N L
Sbjct: 375 FNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLE 434
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+KG+ P +W L Y ++ K + F+K + + +PD
Sbjct: 435 SKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKA--GCIPD 476
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 5/335 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SAL+ +Y ++ EA + E M G + YN +++ G + +V ++ +E+
Sbjct: 226 SALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEML 285
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+N PD +TYN LA C+ E A F E+ ID D +Y+TL K +
Sbjct: 286 RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMD 345
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A + EM + N V YS++ Y G ++ L ++ +M L ++ Y ++
Sbjct: 346 LAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLL 405
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S KLG FE A + E S D N LL Y + + + + +
Sbjct: 406 SIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVF 465
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L Y K E+ +E F++ + K D L + N L + G +D A
Sbjct: 466 PNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLK--ADVVLYSELINALCKNGLVDSAV 523
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII 380
LL + G + YNS++ + ++ ++
Sbjct: 524 LLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 8/235 (3%)
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG-EFEKAENIYDE 244
A+S+L+S Y GY DE +++++ M K N Y VI + K G EF++ I++E
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEE 283
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
D N LLA E A + +N ++ +GI T+ L K GQ
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-Y 363
M+ E + G +K +P+ + + + G ++ A +L ++ G + Y
Sbjct: 344 MDLAYEIMLEMPG--KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 364 NSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
N+LL YAK G+ L + + M V+ D T L + +EV+ +F
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVF 456
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 45 PDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT C+ +L Y + +A AL EK E G P YN ++ +K Q+
Sbjct: 453 PDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQL 512
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L LK+N PDVV Y+ ++ A + + E A F+++ K I + +Y+ L +L+I
Sbjct: 513 LPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFIS 572
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A K M++ +++AY+SL++ + N G ++ +M N
Sbjct: 573 DCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVT 632
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YTC I+ +KL + +A +Y++ + D + +L+AA+ N ++ AE+ ++ +
Sbjct: 633 YTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMK 692
Query: 282 TKG-IKPCYTTWELLTWGYL---KKGQMEKVLE 310
+G P + L Y+ K+ Q EK+ E
Sbjct: 693 QEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYE 725
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 130/310 (41%), Gaps = 6/310 (1%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
+L+ Y ++K+ A A M + G + NH+L++Y +K + ++ ++N
Sbjct: 425 SLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQEN 484
Query: 110 -TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ +YN ++ + E A + + K + PD ++YSTL S + K EKA
Sbjct: 485 GVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKA 544
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+M K N Y+ L++L+ + D R++K M + YT +++
Sbjct: 545 VMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAG 604
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
GE +A ++DE + + + Y+ N+ A Y ++ +G+ P
Sbjct: 605 FCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPD 664
Query: 289 YTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+ +L + G+M + F K G V + + +Y KL ++ D AE
Sbjct: 665 QILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKR---DQAE 721
Query: 347 HLLVTLRNAG 356
L +R G
Sbjct: 722 KLYEEMRAKG 731
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L+ + + S +A L KM++ G Y ++NL+IS+ ++D ++
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRL 582
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ +K++ PD + Y +A + + A F E+ + P+ ++Y+ + Y+K
Sbjct: 583 FKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLK 642
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDA 220
+ +A ++M++R +++ Y+ L++ + N G + ++ +M N
Sbjct: 643 LNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVV 702
Query: 221 EYTCVISSLVKLGEFEKAENIYDE 244
YTC+I+S +KL + ++AE +Y+E
Sbjct: 703 MYTCLINSYIKLNKRDQAEKLYEE 726
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/365 (18%), Positives = 145/365 (39%), Gaps = 39/365 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S L+ + + + +A + ++M G L Y+ +++ + G++DK ++ +E+K
Sbjct: 319 SILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKN 378
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ PDV +Y++ + + D ++A K + E+ P +Y +L Y K +
Sbjct: 379 SGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFAN 438
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTN-----------------------MGYKDEVL 204
A + M+K + +A + +LS+Y Y + +
Sbjct: 439 ALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIH 498
Query: 205 RIWK-----KMMSLFAKM-------NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
RI + K + L M + Y+ +IS K EKA ++ + + T
Sbjct: 499 RICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITF 558
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ + IL+ +I+ ++++A + + + P + L G+ G+M + F
Sbjct: 559 NVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
+ S P+ T N+ + + A L ++ G +I Y L+ +
Sbjct: 619 DEM--SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFC 676
Query: 372 KAGKM 376
G+M
Sbjct: 677 NTGEM 681
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 5/207 (2%)
Query: 84 NHMLNLYI----SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFL 138
NH N I G LD+ ++ +E+K + PDV +Y++ + + + A + F
Sbjct: 280 NHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK 339
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E++ + I P+ SYS L + K +KA +EM+ + +YS L+ + G
Sbjct: 340 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKG 399
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
D ++ W++M S + Y +I K +F A + + + D N
Sbjct: 400 DMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACN 459
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGI 285
+L+ Y + A + + G+
Sbjct: 460 HILSIYCRKPDFNKALALSEKFQENGV 486
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 113/276 (40%), Gaps = 13/276 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYI----SNGQLDK 98
+C+ LL V++ + L E + + G P P Y M+N + + + +
Sbjct: 173 SCNFLLKCLVEDNRVDGVRLLFEVLIKFG----PRPNIHTYTIMMNFFCRGVGCSVDIRR 228
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++L ++ +P+VVTY ++ A + L + + ++ +
Sbjct: 229 ASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIY 288
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ + ++A+ KEM+ + +YS L+ + G D+ ++K+M +
Sbjct: 289 GLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILP 348
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
N Y+ +I K G +KA +++E ++ D +IL+ + + ++ A F+
Sbjct: 349 NIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFW 408
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ + P + L GY K Q L+ F+
Sbjct: 409 EEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFR 444
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
V +++ + AS + E A F+ K I+ + +S + L ++ + +
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196
Query: 175 MEKRTCRKNRVAYSSLLSLYT-NMGYKDEVLR---IWKKMMSLFAKMNDAEYTCVISSLV 230
+ K R N Y+ +++ + +G ++ R I K+ N Y I L
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVP------NILLAAYINRNQLEMAESFYNRLVTKG 284
K+G F A W I P N ++ L+ A + + G
Sbjct: 257 KVGLFGVA------WRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I P ++ +L G+ +KG++++ E FK+ S +P+ + + ++G +D
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS--GILPNIYSYSILIDGFCKEGRVDK 368
Query: 345 AEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
A + ++N+G + Y+ L+ + + G M
Sbjct: 369 ALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 157/365 (43%), Gaps = 12/365 (3%)
Query: 21 AQAQALQTRARENFFENLPDKMR---GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
A ++AL A F +LP + G + + LL ++V+ ++ ++A+A +S F
Sbjct: 92 AFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFG 151
Query: 78 KCPLP----YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKET 132
+ P YN +L + G +D+ + L++ +PD VTY+ ++ A + +
Sbjct: 152 RRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDN 211
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSLL 191
A E+ + D + Y+ L S + + EKA +++ + N Y +L
Sbjct: 212 ALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVML 271
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+G E +W +MM+ + + Y +I L + G+ + A +Y +
Sbjct: 272 DGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLV 331
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D V N L+ + + A F++ GI+ TT+ ++T G L G + + E
Sbjct: 332 LDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQ-ITTYNIMTKGLLDSGMVSEATEL 390
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
K+ + + PD + L E G + A +L RN+G + Y+S++ +
Sbjct: 391 LKQ-LENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF 449
Query: 371 AKAGK 375
K G+
Sbjct: 450 CKDGR 454
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 5/255 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T L+H +N + A ++E G Y+ M+N + +G+
Sbjct: 402 PDKV----TFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHD 457
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ + + K P+ YN + + A K ++E+ P I+Y+TL
Sbjct: 458 ANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLID 517
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K E ++A++ KEM +R + + Y+SL+ D LRIW +++ ++
Sbjct: 518 GLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV 577
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ + +I L G+ ++A IY E + + + + N L+ + ++ A S +
Sbjct: 578 DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLW 637
Query: 278 NRLVTKGIKPCYTTW 292
++ G+KP T+
Sbjct: 638 TAILDNGLKPDIVTY 652
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 117/296 (39%), Gaps = 38/296 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++L+ + + ++ EA + G + YN M + +G + + ++L++L+
Sbjct: 338 NSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELLKQLEN 396
Query: 109 NTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ S PD VT+ + A + + + + + D SYS++ + + K
Sbjct: 397 DASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH 456
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A K M K C+ N Y++L++ + + ++ ++I+ +M S Y +I
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516
Query: 227 SSLVKLGEFEKAENIYDE--------------------------------WESISGTG-- 252
L K ++++A ++ E W+ I G
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQ 576
Query: 253 -DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D V NIL+ + +++ A Y + K P T+ L G+ + G ++K
Sbjct: 577 VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 36/259 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+AL++ + + K +A + +M+ G + YN +++ + + + +E L+
Sbjct: 478 NALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLE 537
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ PD+ TY + + A + + E+ + D + ++ L ++
Sbjct: 538 RGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDE 597
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A EM+++ C N V Y++L+ + +G D+ +W ++ K + Y I
Sbjct: 598 AFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIK 657
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L R P +L N ++ GI P
Sbjct: 658 GLCSCN---------------------RTPEGVL--------------LLNEVLATGIMP 682
Query: 288 CYTTWELLTWGYLKKGQME 306
TW +L +K G ++
Sbjct: 683 TVITWSILVRAVIKYGPIQ 701
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 144/335 (42%), Gaps = 15/335 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ Y K EA +L+E+ G + + YN +L G+L + + +E+KK
Sbjct: 342 NTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK 401
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ +P++ TYN+ + + E A K +K+ + P+ ++ + + K + ++A
Sbjct: 402 DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEA 461
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ + M + C + V + SL+ G D+ R++++M+ N YT +I S
Sbjct: 462 CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKS 521
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K G E I+ E + D R+ N + + + + + ++G P
Sbjct: 522 FFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPD 581
Query: 289 YTTWELLTWGYLKKGQMEKVLECF--KKAIGSVRKWVPDHRLITAAYNKLEE----QGDI 342
++ +L G +K G + E F K G V L T AYN + G +
Sbjct: 582 VMSYSILIHGLVKAGFARETYELFYAMKEQGCV--------LDTHAYNTFIDGFCKSGKV 633
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ A LL ++ G T + Y S++ AK ++
Sbjct: 634 NKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRL 668
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 138/311 (44%), Gaps = 5/311 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACA 125
L +M E G+ + ++ ++ G+LD +L E+K N D+V YN+ +
Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFG 279
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A K F E+K + PD ++Y+++ + K ++A ++ME+
Sbjct: 280 KAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAY 339
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++++ Y + G DE + ++ + + Y C+++ L K G +A ++E
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + N+L+ ++E A + + G+ P T ++ K ++
Sbjct: 400 KK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYN 364
++ F+ + + PD + + L +QG +D A L + ++ + + +Y
Sbjct: 459 DEACSIFEGM--NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYT 516
Query: 365 SLLRTYAKAGK 375
SL++++ K G+
Sbjct: 517 SLIKSFFKCGR 527
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 48/320 (15%)
Query: 24 QALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A +T FE + + PD + S L+H V+ + E L M E G +
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTH 618
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ + +G+++K Q+L+E+K K P VVTY + A
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLA--------------- 663
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K++ ++A +E + N V YSSL+ + +G
Sbjct: 664 --------------------KIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRI 703
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
DE I +++M N + C++ +LVK E +A + +++ GT + +IL
Sbjct: 704 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSIL 763
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGS 318
+ + A F+ + +G+KP T+ + G K G + + F+ KA G
Sbjct: 764 INGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823
Query: 319 VRKWVPDHRLITAAYNKLEE 338
VPD +A+YN + E
Sbjct: 824 ----VPD----SASYNAIIE 835
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 152/362 (41%), Gaps = 8/362 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ +A+ L + FE + K+ PD T +L+ + + +A L E+M +
Sbjct: 451 RLCKAKKLDEAC--SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK 508
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ + Y ++ + G+ + ++ +E + + SPD+ N ++ +
Sbjct: 509 IPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRA 568
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F E+K PD +SYS L +K + M+++ C + AY++ + +
Sbjct: 569 LFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G ++ ++ ++M + + Y VI L K+ ++A +++E +S +
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+ + L+ + +++ A L+ KG+ P TW L +K ++ + L CF+
Sbjct: 689 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
K P+H + N L + A ++ G +T Y +++ AKAG
Sbjct: 749 --KNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAG 806
Query: 375 KM 376
+
Sbjct: 807 NI 808
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E + K R P T +++ + + EA L E+ G + Y+ +++ +
Sbjct: 639 LLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFG 698
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++D+ +++EL +K +P+V T+N L A + A F +K K P+ I
Sbjct: 699 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHI 758
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+YS L + ++ KA +EM+K+ + N + Y+++++ G E ++++
Sbjct: 759 TYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERF 818
Query: 211 MSLFAKMNDAEYTCVISSL 229
+ + A Y +I L
Sbjct: 819 KANGGVPDSASYNAIIEGL 837
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 126/317 (39%), Gaps = 49/317 (15%)
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 137
CP Y+ +L + N + D Q+L E+ P T + +C N
Sbjct: 127 CPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLI 186
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++K K P + +Y+TL A ++++E
Sbjct: 187 QCMRKFKFRPAFSAYTTLIG----------ALSSVQE----------------------- 213
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
D +L ++ +M L +++ +T VI + G + A ++ DE +S D +
Sbjct: 214 --SDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLY 271
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N+ + + +++MA F++ + + G+ P T+ + K ++++ +E F++
Sbjct: 272 NVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQM-- 329
Query: 318 SVRKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ VP AYN + G D A LL + G + + I YN +L K
Sbjct: 330 EQNRNVP----CAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGK 385
Query: 373 AGKM--PLIIVERMQKD 387
G++ L E M+KD
Sbjct: 386 KGRLGEALRTFEEMKKD 402
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 154/361 (42%), Gaps = 12/361 (3%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ +Y + +AEA+ +M G + YN +N + G DK ++ +
Sbjct: 191 DTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKR 250
Query: 106 LKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KK+ P TY + + A K F E+ P+ +Y+ L + + + L
Sbjct: 251 MKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGL 310
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA ++M++ + AY++L+ Y+ GY I+ M + + + A Y
Sbjct: 311 CEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 370
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + K G + AE ++ + + + T + +LL+AY + E N++ G
Sbjct: 371 LVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSG 430
Query: 285 IK-PCYTTWELLT-WGYLKK-GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K Y +L +G L + G+ME+VL +K +V D N+ + G
Sbjct: 431 LKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKG-----SYVADISTYNILINRYGQAGF 485
Query: 342 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKV 398
I+ E L L + G + S + Y+K L I E M D D T KV
Sbjct: 486 IERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKV 545
Query: 399 L 399
L
Sbjct: 546 L 546
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 9/302 (2%)
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
LQ L+ P TY L + A E AE F E++ + + Y+ + +K
Sbjct: 179 LQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKG 238
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+KA K M+K C+ Y+ L++LY G L+++ +MMS K N Y
Sbjct: 239 GNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTY 298
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T ++++ + G EKAE ++++ + D N L+ AY A ++ +
Sbjct: 299 TALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQH 358
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQG 340
G +P ++ +L Y K G + FK K +G + + H ++ +AY+K+ G
Sbjct: 359 MGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVG-ITPTMKSHMVLLSAYSKM---G 414
Query: 341 DIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQK 397
++ E +L + +G + T + NS+L Y + G+ + ++ M+K + D T
Sbjct: 415 SVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYN 474
Query: 398 VL 399
+L
Sbjct: 475 IL 476
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 138/337 (40%), Gaps = 9/337 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L+ ++ Q EAE+ ++ E + Y ++ Y +G L+K + E++
Sbjct: 161 LIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYG 220
Query: 111 SP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P V YN ++ + + AE+ F +KK P +Y+ L +LY K A
Sbjct: 221 LPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMAL 280
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM C+ N Y++L++ + G ++ ++++M + + Y ++ +
Sbjct: 281 KLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAY 340
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G A I+ + + D NIL+ AY + AE+ + + GI P
Sbjct: 341 SRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTM 400
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ +L Y K G + K E + S K D ++ + N G E +L
Sbjct: 401 KSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKL--DTYVLNSMLNLYGRLGQFGKMEEVL 458
Query: 350 VTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQ 385
+ +V+ YN L+ Y +AG +ERM+
Sbjct: 459 RVMEKGSYVADISTYNILINRYGQAG-----FIERME 490
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 109/268 (40%), Gaps = 44/268 (16%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P+ C+ AL++++ + +AE + E+M E G YN ++ Y G ++
Sbjct: 293 PNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEI 352
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ PD +YN+ + A ++ AE F ++K+ I P S+ L S Y K
Sbjct: 353 FSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSK 412
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY---KDEVLRIWKKMMSLFAKMN 218
M K L +M K + + +S+L+LY +G +EVLR+ +K S A +
Sbjct: 413 MGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKG-SYVADI- 470
Query: 219 DAEYTCVISSLVKLGEFEKAENIYD------------EWESISGT--------------- 251
+ Y +I+ + G E+ E+++ W S G
Sbjct: 471 -STYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFE 529
Query: 252 --------GDPRVPNILLAAYINRNQLE 271
D +LLAA N +Q E
Sbjct: 530 EMIDDGCYPDGGTAKVLLAACSNEDQTE 557
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
LL +Y + + E ++ +M + G N MLNLY GQ K+ ++L+ ++K
Sbjct: 405 VLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKG 464
Query: 110 T-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ D+ TYN+ + E E F L + PD +++++ Y K +L K
Sbjct: 465 SYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKC 524
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+EM C + LL+ +N ++V + + M
Sbjct: 525 LEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 566
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 5/335 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 107
SAL+ +Y ++ EA + E M G + YN +++ G + +V ++ +E+
Sbjct: 226 SALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEML 285
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+N PD +TYN LA C+ E A F E+ ID D +Y+TL K +
Sbjct: 286 RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMD 345
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A + EM + N V YS++ Y G ++ L ++ +M L ++ Y ++
Sbjct: 346 LAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLL 405
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S KLG FE A + E S D N LL Y + + + + +
Sbjct: 406 SIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVF 465
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L Y K E+ +E F++ + K D L + N L + G +D A
Sbjct: 466 PNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLK--ADVVLYSELINALCKNGLVDSAV 523
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII 380
LL + G + YNS++ + ++ ++
Sbjct: 524 LLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 8/235 (3%)
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG-EFEKAENIYDE 244
A+S+L+S Y GY DE +++++ M K N Y VI + K G EF++ I++E
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEE 283
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
D N LLA E A + +N ++ +GI T+ L K GQ
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-Y 363
M+ E + G +K +P+ + + + G ++ A +L ++ G + Y
Sbjct: 344 MDLAYEIMLEMPG--KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 364 NSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
N+LL YAK G+ L + + M V+ D T L + +EV+ +F
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVF 456
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 151/346 (43%), Gaps = 6/346 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + +K P+ T + L+ + K EA ++ +MSE G + + YN +++ Y
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 91 ISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G +D ++L ++ N+ P+ TYN + + A ++ + K+ P
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y++L K+ E A L M + ++ YS + G +E ++
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + K N+ YT +I K+G+ + A ++ + + + + N+L+ +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
++ A S +++T G+KP T+ +L LK G + L+ F + + PD
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS--LGYQPDVCTY 617
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
TA + QG ++ + ++ + G + + Y L+ YA+ G
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%)
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
L+ L SP++ T+N + + AE ++ + + PD +Y++L + +
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ + A M ++ C++N V+Y++L+ G +E L+++ M Y
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T +I +L G +A N+++E + + +L+ N+++ A + +
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLE 310
KG+ P T+ L GY K+G ++ E
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFE 390
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 9/243 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + KK EA +L+ KM G + Y ++ + +G D ++ +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
PDV TY +L A SQ E + ++ + I PD ++Y+ L Y ++ L
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDAEYTC 224
+A LK M C+ + S L+ N+ +++ + ++ + + +N +
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIK---NLSHENRMKETRSEIGIDSVSNVNSVD--- 719
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I+ + K E+E A ++++ T D + L+A + + +LE A+ + + +G
Sbjct: 720 -IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG 778
Query: 285 IKP 287
+ P
Sbjct: 779 MSP 781
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 152/345 (44%), Gaps = 5/345 (1%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE+L R P T + ++ Y K EA +L+E+ G + + YN +L
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRK 355
Query: 93 NGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G++D+ ++ +E+KK+ +P++ TYN+ + +TA + ++K + P+ +
Sbjct: 356 MGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ + K + ++A +EM+ + C + + + SL+ +G D+ ++++KM+
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ N YT +I + G E IY + + + + D ++ N + + E
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
+ + + + P ++ +L G +K G + E F + V D R
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM--KEQGCVLDTRAYNIV 593
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ + G ++ A LL ++ G T + Y S++ AK ++
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 141/311 (45%), Gaps = 5/311 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACA 125
L ++M E G+ + ++ + G++D +L E+K ++ D+V YN+ + +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A K F E++ + PD ++Y+++ + K ++A + +EK
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++++ Y + G DE + ++ + + + Y C+++ L K+G+ ++A +++E
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + NIL+ +L+ A + + G+ P T ++ K ++
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYN 364
++ F++ + PD + + L + G +D A + + ++ ++ +Y
Sbjct: 429 DEACAMFEEM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 365 SLLRTYAKAGK 375
SL++ + G+
Sbjct: 487 SLIKNFFNHGR 497
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 38/289 (13%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + + PD + S L+H ++ + E L M E G + YN +++ +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+++K Q+L+E+K K P VVTY + A + + A F E K +I+ + +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 152 YSTLT--------------------------SLY---------IKMELPEKAATTLKEME 176
YS+L +LY +K E +A + M+
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
+ C N+V Y L++ + ++ W++M K + YT +IS L K G
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+A ++D +++ G D N ++ N N+ A S + +G+
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 134/343 (39%), Gaps = 11/343 (3%)
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 137
CP YN +L + D + Q+L E+ P V T + C N
Sbjct: 97 CPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVV 156
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++K K P + +Y+TL + + + T ++M++ +++L+ +
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G D L + +M S + Y I S K+G+ + A + E E+ D
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF--KKA 315
++ N+L+ A + L PC + + GY G+ ++ ++A
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
GS+ + + ++T L + G +D A + ++ + YN L+ +AGK
Sbjct: 337 KGSIPSVIAYNCILTC----LRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 376 M--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
+ + + MQK + + T ++ ++ + E ++F
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 125/282 (44%), Gaps = 3/282 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + K+ PD T +L+ + + +A + EKM + + Y ++ + +
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G+ + ++ +++ +N SPD+ N ++ + E F E+K + PD S
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS L IK + M+++ C + AY+ ++ + G ++ ++ ++M
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + Y VI L K+ ++A +++E +S + + + L+ + +++
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
A L+ KG+ P TW L +K ++ + L CF+
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 4/280 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLW 120
EA L +M G YN +++ + GQ ++L E+ K++ PDV T+N+
Sbjct: 214 EACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNIL 273
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ A A F + K ++PD +S + L + + +A M +R
Sbjct: 274 VDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGK 333
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
N ++YS+L++ Y + DE LR+ +M + Y C++ L K G +
Sbjct: 334 LPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD 393
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ + + D N+LL Y+ R L+ A + + +V GI P T+ +L G
Sbjct: 394 LVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLC 453
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
K G+M+ E F+ + SV+ P+ R N L +G
Sbjct: 454 KGGRMKAAKEIFQ--LLSVKGCRPNIRTYNIMINGLRREG 491
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 14/260 (5%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D + Y TL + KM A L++MEK R N + Y+ ++ G E +
Sbjct: 160 DEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLC 219
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW---ESISGTGDPRVPNILLAAY 264
+M+ ++ Y +I G+F+ A + +E E + D NIL+ A
Sbjct: 220 SEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR--PDVYTFNILVDAL 277
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKW 322
+ A + + ++ +G++P + L G+ +G M + E F + + G +
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNV 337
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPL--I 379
+ LI Y K++ +D A LL + V T YN LL +K+G++
Sbjct: 338 ISYSTLIN-GYCKVKM---VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD 393
Query: 380 IVERMQKDNVQMDAETQKVL 399
+VE M+ D T VL
Sbjct: 394 LVEAMRASGQAPDLITYNVL 413
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 159/376 (42%), Gaps = 17/376 (4%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ +LQ ENF +++P+ RG LL + V +AE L KM E F
Sbjct: 214 VAKVHSLQKA--ENFLKDIPESFRGEVVYRTLLANCVLKHHVNKAEDLFNKMKELKFPTS 271
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
N +L LY + + +L ++N P TY + + D EK
Sbjct: 272 VFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKIVET 331
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K+ I+ D +TL YI+ L E+A +KE+E + ++ SLL LY ++G
Sbjct: 332 MKEEGIEVDPELQATLAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGD 391
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD--PRVP 257
D V R +S F N Y IS++ G+ ++ E +E + P +P
Sbjct: 392 SDNVRR-----LSTFVDQN-LRYDNCISAIRAWGKLKEVEEAEAVFERLVEKYKIFPMLP 445
Query: 258 NI-LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
L+ Y L + R+ G+ +TW L Y+K G++ K +A
Sbjct: 446 YFALMEIYTENKMLAKGKDLVKRMGNAGVTIGPSTWHALVKLYIKAGEVGKAELILNRAT 505
Query: 317 --GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
+R + I Y K +GD+ E + + ++ A + + + Y ++L Y KA
Sbjct: 506 KDNKMRPMFISYMAILEEYAK---RGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYIKA 562
Query: 374 GKMPLIIVERMQKDNV 389
+ ERM+ DNV
Sbjct: 563 KTPAYGMFERMKADNV 578
>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 755
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 123/300 (41%), Gaps = 3/300 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
S+ L + A + +++ E G L Y M++ Y + G+ DK Q L K
Sbjct: 444 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLK 503
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P ++TY L + AC+ AE F +K + PD ++Y+ L Y K K
Sbjct: 504 SGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNK 563
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ EM + Y+ L+ GY DE I +++ + +T VI
Sbjct: 564 VFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIG 623
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L K G+F++A ++ + D + LL Y ++E A +++L+ G+KP
Sbjct: 624 GLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKP 683
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ L GY G +EK E + R +P+ A LE + ++ EH
Sbjct: 684 DVVLYNTLIHGYCSVGDIEKACELIGLMVQ--RGMLPNESTHHALVVGLEGKRFMNSEEH 741
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 5/267 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P++ Y+ +L+ S D A F E+ + + PD Y+T+ Y + +KA
Sbjct: 438 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQF 497
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ K + + Y+ L+ + G + +++ M + + Y ++ K
Sbjct: 498 FGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGK 557
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+ K + DE S + D NIL+ + + R ++ A + L+ +G P
Sbjct: 558 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALA 617
Query: 292 WELLTWGYLKKGQM-EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + G K+G E + F A V+ PD +A + ++ A L
Sbjct: 618 FTDVIGGLSKRGDFQEAFILWFYMADLRVK---PDVVTCSALLHGYCRAQRMEKAIVLFD 674
Query: 351 TLRNAG-HVSTEIYNSLLRTYAKAGKM 376
L +AG +YN+L+ Y G +
Sbjct: 675 KLLDAGLKPDVVLYNTLIHGYCSVGDI 701
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 27 QTRARENFFENLPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+T FE L D+MR PD T + L+HS V EA ++ ++ GF+
Sbjct: 557 KTHQLNKVFE-LIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSA 615
Query: 81 LPYNHMLNLYISNGQLDKVPQM---LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
L + ++ G + + + +L+ PDVVT + L E A F
Sbjct: 616 LAFTDVIGGLSKRGDFQEAFILWFYMADLR--VKPDVVTCSALLHGYCRAQRMEKAIVLF 673
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+L + PD + Y+TL Y + EKA + M +R N + +L+
Sbjct: 674 DKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 727
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD TCSALLH Y + ++ +A L +K+ + G + YN +++ Y S G ++K ++
Sbjct: 648 PDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 707
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+ + ++ P+ T++ + + + E A + L++ +
Sbjct: 708 IGLMVQRGMLPNESTHHALVVGLEGKRFMNSEEHASMLLEEIVV 751
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 129/289 (44%), Gaps = 3/289 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ + + ++A+A + M + G + + YN +++ G++D+ ++L+++
Sbjct: 119 TYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 178
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PD TYN+ + +S E A F +K+ K PD ++Y+TL + K+
Sbjct: 179 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 238
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A EM+ C + + +L+ G ++ L +++ + N Y +
Sbjct: 239 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNAL 298
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS + G+ +K ++ + S D IL+ + R MA +V +G
Sbjct: 299 ISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 358
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
P T+ +L GQ+E FK+ I + + PD + +A N
Sbjct: 359 TPALATYNVLIRSLSMAGQVEDAYTLFKEMIA--KGFNPDMQTYSALPN 405
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 121/299 (40%), Gaps = 5/299 (1%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTS--PDVVTYNLWLAACASQNDKETAEKAFL 138
+ YN ++ Y G D+ M + LK+ S P+ V+++ + + A F
Sbjct: 12 VAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQ 71
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ + D +TL ++ + +A L M + YS L+ G
Sbjct: 72 EMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAG 131
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+ L ++ M + Y +IS L K G+ ++A + ++ D R N
Sbjct: 132 RAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYN 191
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
I++ + + E A SF+ + + P T+ L G K + ++ + F +
Sbjct: 192 IVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM--Q 249
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
K +PD + L + G ++ A L GHV ++ IYN+L+ + ++G++
Sbjct: 250 ANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQV 308
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 4/319 (1%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYN 118
++ +A A+ ++M G N +++ G L + ++L + + DV TY+
Sbjct: 62 RATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYS 121
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ A A + F ++K PD + Y+ L S K ++A L++M ++
Sbjct: 122 YLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 181
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
+ Y+ ++ + ++ G ++ + M + Y +++ L KL ++A
Sbjct: 182 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 241
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+++DE ++ D L+ ++E A RLV G P + L G
Sbjct: 242 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISG 301
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV 358
+ + GQ++K E F+ I PD T +G A LL + GH
Sbjct: 302 FCRSGQVDKGYELFQDMIEC--SCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 359
Query: 359 -STEIYNSLLRTYAKAGKM 376
+ YN L+R+ + AG++
Sbjct: 360 PALATYNVLIRSLSMAGQV 378
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+AL+ + ++ + + L + M EC + Y ++ + G ++LQE+ +
Sbjct: 296 NALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 355
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ +P + TYN+ + + + E A F E+ +PD +YS L +L
Sbjct: 356 EGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 406
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ + +GQ+DK ++ Q++ + + PD +TY + + + + A + E+
Sbjct: 295 YNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 354
Query: 142 KTKIDPDWISYSTLT-SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
+ P +Y+ L SL + ++ E A T KEM + + YS+L +L T
Sbjct: 355 REGHTPALATYNVLIRSLSMAGQV-EDAYTLFKEMIAKGFNPDMQTYSALPNLST 408
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ P TY L L A + AE E+++ I P Y+ +K
Sbjct: 6 LEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCA 65
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA + M++ CR N Y+ ++++Y ++++K+M S+ K N YT +
Sbjct: 66 EKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTAL 125
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++ + G EKAE +++E + D N L+ AY + A ++ + G
Sbjct: 126 VNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGC 185
Query: 286 KPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+P ++ +L Y + G + E V E K+ + + H L+ AA+ + G++
Sbjct: 186 EPDRASYNILVDAYGRAGLHREAEAVFESLKRQ--GMAPTMKSHMLLLAAHAR---SGNV 240
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
E ++ L +G I N++L Y +AG++
Sbjct: 241 ARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRL 275
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 35/269 (13%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y M+N+Y + Q ++ +E++ ++ TY + A A + E AE+ F E++
Sbjct: 87 YTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQ 146
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ +PD +Y+ L Y + P+ A+ M+ C +R +Y+ L+ Y G
Sbjct: 147 QAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHR 206
Query: 202 EVLRIW------------KKMMSLFAKM----NDAEYTCVISSLVKLG------EFEKAE 239
E ++ K M L A N A V++ L K G
Sbjct: 207 EAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAML 266
Query: 240 NIY------DEWESI------SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
N Y D+ E + GT D N+ + AY LE E+ + L +G+
Sbjct: 267 NAYGRAGRLDDMERLLAAMERRGTRDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAA 326
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAI 316
TW Y +K + + LE F++ +
Sbjct: 327 DVVTWTSRMGAYARKKEYRRCLEIFEEMV 355
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 29 RARENFFENLPDKMRGPDTCSA--LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
R E FE+L + P S LL ++ ++ A E +M ++ + G + N M
Sbjct: 206 REAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAM 265
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
LN Y G+LD + ++L +++ + DV TYN+ + A E E AF L++ +
Sbjct: 266 LNAYGRAGRLDDMERLLAAMERRGTRDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLA 325
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
D +++++ Y + + + +EM C
Sbjct: 326 ADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGC 359
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 10/267 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL++++ + +AE + E+M + G YN ++ Y G PQ E+
Sbjct: 121 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG----FPQAASEI 176
Query: 107 -----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
PD +YN+ + A AE F LK+ + P S+ L + + +
Sbjct: 177 FSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHAR 236
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + ++ K + +A +++L+ Y G D++ R+ M + +
Sbjct: 237 SGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGT 295
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +++ + G E+ E + E D + AY + + + +V
Sbjct: 296 YNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMV 355
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKV 308
G P T ++L + Q+E+V
Sbjct: 356 DAGCYPDAGTAKVLVAACSDERQVEQV 382
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 149/331 (45%), Gaps = 3/331 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ +++QN + +A ++++M E G YN ++ ++D+ L E+ +
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P+ TY +++ ++ +A+K E+++ + P+ + + L + Y K E +
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIE 575
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + + M + + Y+ L++ D+ I+++M + Y +I+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
KLG +KA +I+DE T + + N+LL + ++E A+ + + KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + GY K G + + F + ++ VPD + T + D++ A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 348 LLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
+ T + ST +N+L+ K GK L
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 136/330 (41%), Gaps = 4/330 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
++L+ Y + K + L+ +M + + P Y ++ S+G LD +++E +
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P+VV Y + + A + E+K+ I PD Y++L K + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + L EM + + N Y + +S Y + K+M N T +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K + +A + Y GD + +L+ ++++ AE + + KGI P
Sbjct: 566 EYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ +L G+ K G M+K F + + P+ + G+I+ A+
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
LL + G H + Y +++ Y K+G +
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 135/354 (38%), Gaps = 56/354 (15%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + K PD S L++ + + +A ++ ++M E G + YN +L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ +G+++K ++L E+ K P+ VTY + D A + F E+K + PD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEK------------------------------- 177
Y+TL ++ E+A T +K
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 178 -------RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
R + N V Y+ ++ G + ++ +M + YT +++
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA-----ESFYNRLVTKGI 285
K+G + ++DE + D + ++++ A++ A + F V G
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 286 KPCYTTWELLTWGYLKKGQM---EKVLECFKKAIGSVR-KWVPDHRLITAAYNK 335
K +T L G+ K G+M EKV+E VR +++PD + N+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVME------NMVRLQYIPDSATVIELINE 959
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/415 (18%), Positives = 157/415 (37%), Gaps = 57/415 (13%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L+ + K+ +A++L+ +M G Y+ +++ + D ++ E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 107 KK---NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
N P Y+ + + + E A+ F + + + P +Y++L Y + +
Sbjct: 339 VSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ L EM+KR + Y +++ + G D I K+M++ + N YT
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I + ++ F A + E + D N L+ +++ A SF +V
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKK------------AIGSVRKWVPDHRLITA 331
G+KP T+ GY++ + + K+ G + ++ ++I A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEA 576
Query: 332 --AYNKLEEQG-------------------DIDGAEHLLVTLRNAGHVSTEI--YNSLLR 368
AY + +QG +D AE + +R G ++ ++ Y L+
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLIN 635
Query: 369 TYAKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEMPV 407
++K G M P +I+ M E +K ++ EM V
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 141/338 (41%), Gaps = 16/338 (4%)
Query: 43 RGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDK 98
R PD TC+AL+ + ++AEA ++ + CG P + YN M+ Y GQLD
Sbjct: 92 RRPDAGTCAALIKKLSASGRTAEARRVL---AACG----PDVMAYNAMVAGYCGAGQLDA 144
Query: 99 VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+++ E+ PD TYN + + A E+ + + PD ++Y+ L
Sbjct: 145 ARRLVAEMP--VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEA 202
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
K ++A L EM + C + V Y+ +++ G D+ + K + S + N
Sbjct: 203 TCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 262
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y V+ L +E AE + E + N+L++ + +E A
Sbjct: 263 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 322
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
++ G P ++ L + K+ +M+K + + R PD L
Sbjct: 323 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS--RGCYPDIVSYNTLLTALCR 380
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
G++D A LL L++ G I YN+++ KAGK
Sbjct: 381 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 137/297 (46%), Gaps = 13/297 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLN 88
F +NLP P+T S +L ++ +AE LM +M + G CP + +N +++
Sbjct: 250 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG---CPPNVVTFNMLIS 306
Query: 89 LYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-ID 146
G ++ ++L+++ K +P+ ++YN L A Q + A AFL+L ++
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA-MAFLDLMVSRGCY 365
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD +SY+TL + + + A L +++ + C ++Y++++ T G E L +
Sbjct: 366 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 425
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+M+S + + Y+ + + L + E A + + + + + + N ++
Sbjct: 426 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 485
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRK 321
R + A + ++ G P +T+ +L G +G +++ + + G VRK
Sbjct: 486 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRK 542
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 13/304 (4%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
LL+ K+ EA + L+++M E G + + YN +L + + ++ ++L + +
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194
Query: 110 ----TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+VV+Y+ + ++ + FLE+ I PD ++Y+T+ K +L
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLF 254
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A ++M + N Y+ L+ Y ++G EV+R+ ++M + K N Y +
Sbjct: 255 DRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSL 314
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVT 282
++ L K G +A +D S+ G G P V I+L Y + L N +V
Sbjct: 315 LNYLCKNGRCREARFFFD---SMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVA 371
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
GI P + + + Y K G ++K ++ F K + PD A + L + G +
Sbjct: 372 NGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM--RQQGLSPDAVSYGALIDALCKLGRV 429
Query: 343 DGAE 346
D AE
Sbjct: 430 DDAE 433
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 3/275 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P+ C+ +LL+ +N + EA + M G Y ML+ Y + G L ++ +
Sbjct: 306 PNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDL 365
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L + N SP+ +N++ +A A + A F ++++ + PD +SY L K
Sbjct: 366 LNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCK 425
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A +M + V +SSL+ + ++V ++ +M+++ N
Sbjct: 426 LGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF 485
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ +L K G + + + D E + D N L+ + ++ A +V
Sbjct: 486 FNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV 545
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ G+KP ++ L GY K G+++ F+K +
Sbjct: 546 SVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKML 580
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 143/357 (40%), Gaps = 16/357 (4%)
Query: 29 RAREN--FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
R RE FF+++ K P T +LH Y +E L+ M G P +
Sbjct: 323 RCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGIS----PNH 378
Query: 85 HMLNLYISN----GQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
H+ N++ S G +DK + ++++ SPD V+Y + A + AE F +
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + PD + +S+L ++ EK EM N V ++++L G
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E R+ + + + + Y +I G ++A + + S+ D N
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
LL Y +++ A S + ++++ GI P T+ + G + + + E + I S
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
KW D N L + +D A + L + G ++ +N ++ K G+
Sbjct: 619 TKW--DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 161/422 (38%), Gaps = 75/422 (17%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYN 84
A + + +P+ PDT S LL K++ EA L+ M++ CP + Y+
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYS 207
Query: 85 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++N + + GQ+DK + E+ + PDVVTY + + AE F ++
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN 267
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL---------- 193
+ P+ +Y+ L Y+ + ++ L+EM + N Y SLL+
Sbjct: 268 GVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA 327
Query: 194 -------------------------YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
Y G E+ + M++ N + S+
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSA 387
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K G +KA +I+++ + D L+ A +++ AE +N+++ +G+ P
Sbjct: 388 YAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSV------------------RKWVPDHRLIT 330
+ L +G + EKV E F + + + + RL+
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVD 507
Query: 331 A-----------AYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ +YN L + G ID A LL + + G YN+LL Y KAG
Sbjct: 508 SIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAG 567
Query: 375 KM 376
++
Sbjct: 568 RI 569
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 163/375 (43%), Gaps = 16/375 (4%)
Query: 37 NLPDKMR----GPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
++ +KMR PD S AL+ + + + +AE +M G + ++ ++
Sbjct: 399 DIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGL 458
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ + +KV ++ E L P++V +N L + ++ ++ + PD
Sbjct: 459 CTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDV 518
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
ISY+TL + ++A+ L+ M + + +Y++LL Y G D ++K
Sbjct: 519 ISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRK 578
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S Y ++ L + F +A+ +Y + D NI+L N
Sbjct: 579 MLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNC 638
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHR 327
++ A + L +KG++ T+ ++ LK G+ E ++ F A G V+ V +R
Sbjct: 639 VDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVT-YR 697
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKMPL--IIVERM 384
L+ L E+G ++ + L + +N ++++ N+L+R G + + ++
Sbjct: 698 LVV---ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 754
Query: 385 QKDNVQMDAETQKVL 399
+ N ++A T +L
Sbjct: 755 DERNFSVEASTTSML 769
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 172/442 (38%), Gaps = 86/442 (19%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T + +LH Q K+ +EA+ L M G YN +LN + +D+ +M
Sbjct: 587 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMF 646
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT------ 156
Q L K +++T+N+ + A KE A F + + + ++Y +
Sbjct: 647 QNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEE 706
Query: 157 -------SLYIKME----LP------------------EKAATTLKEMEKRTCRKNRVAY 187
SL+ ME P +A L ++++R
Sbjct: 707 GSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTT 766
Query: 188 SSLLSLYTNMGYKDEVLRIWKK---------------------MMSLFAKM-------ND 219
S L+S++++ Y+ + KK SLF +M +
Sbjct: 767 SMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDV 826
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y ++ L + G F +A+ +Y + + NI+L N ++ A +
Sbjct: 827 VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQS 886
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKL 336
L +KG++ T+ ++ LK G+ E ++ F A VPD +RL+ L
Sbjct: 887 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF--AAIPANGLVPDVVTYRLVA---ENL 941
Query: 337 EEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKMPL--IIVERMQKDNVQMDA 393
E+G ++ + L +T+ +G + + + N+L+R + G + + ++ + N ++A
Sbjct: 942 IEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEA 1001
Query: 394 ETQKVLKITSEMPVSEVSSIFS 415
T SE+ S+FS
Sbjct: 1002 ST-----------TSELISLFS 1012
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 164/376 (43%), Gaps = 26/376 (6%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F + DK P+ T + L++ +A L+++M E GF+ + YN +LN Y
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278
Query: 91 ISNGQLDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK---ID 146
G+ +++ + K DV TYN+++ + + + KA+L LKK + I
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNH---RSAKAYLLLKKMRKEMIS 335
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ ++Y+TL + ++K AA EM K N V Y++L+ + ++G +E LR+
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
M + ++N+ G +A +Y D N+L+++
Sbjct: 396 LDHMEAAGLRLNEH------------GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCR 443
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+L AE F + G+ P T++ + GY G F I + P
Sbjct: 444 DGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH--PSF 501
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKM--PLIIVER 383
+ L + G++ A+ L L G V + +YN+LL K+G + + + ++
Sbjct: 502 FTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDK 561
Query: 384 MQKDNVQMDAETQKVL 399
M ++NV D+ T L
Sbjct: 562 MVQNNVLPDSYTYSSL 577
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 144/398 (36%), Gaps = 56/398 (14%)
Query: 43 RGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKV 99
G D TC+ L+ S ++ K EAE + MS G + + Y+ ++N Y S G L+
Sbjct: 427 HGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAF 486
Query: 100 PQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
+K P TY L + A+K L D + Y+TL +
Sbjct: 487 SFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAET 546
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM---SLFAK 216
K +A +M + + YSSLL+ G + ++ M +LF
Sbjct: 547 CKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP- 605
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N YTC++ L K G + A ++E D N ++ + R Q+ A F
Sbjct: 606 -NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 664
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK----------------AIGSVR 320
++ + G+ P T+ +L G+ KK + + L + +G +
Sbjct: 665 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 724
Query: 321 KWVPD-----------------------------HRLITAAYNKLEEQGDIDGAEHLLVT 351
+PD H N + GDI GA L
Sbjct: 725 SGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 784
Query: 352 LRNAGHVSTEIYNS-LLRTYAKAGKM--PLIIVERMQK 386
+ G S E+ S ++R GK +++++ M +
Sbjct: 785 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR 822
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/384 (17%), Positives = 137/384 (35%), Gaps = 67/384 (17%)
Query: 18 QRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
R A+A L + R+ P+++ T + L++ +V+ K A + +MS+
Sbjct: 317 HRSAKAYLLLKKMRKEMIS--PNEV----TYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 370
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELK------------------------KNTSPD 113
+ YN ++ + G ++ ++L ++ D
Sbjct: 371 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGAD 430
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
T N+ +++ AEK + + + P+ I+Y + + Y + P A +
Sbjct: 431 HFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD 490
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
+M K + Y SLL L K G
Sbjct: 491 DMIKCGQHPSFFTYGSLL-----------------------------------KGLCKGG 515
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+A+ + I G D + N LLA L A + ++++V + P T+
Sbjct: 516 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 575
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
L G +KG+ + F A+G P+H + T + L + G A + +
Sbjct: 576 SLLTGLCRKGKAVTAVCLFGTAMGR-GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 634
Query: 354 NAGHV-STEIYNSLLRTYAKAGKM 376
G T +N+++ + ++ G+M
Sbjct: 635 KKGTCPDTVAFNAIIDSCSRRGQM 658
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/217 (16%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+KK T PD V +N + +C+ + A F ++ + P+ +Y+ L + K +
Sbjct: 634 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 693
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-----SLFAKM--- 217
+ + M + +++ + SL+ + G D +++ KM+ + +M
Sbjct: 694 LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLEN 753
Query: 218 ----NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
A+Y +I+ + ++G+ + A + DE E++ + ++ ++ + E A
Sbjct: 754 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 813
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ ++ + P T+ L + + ++ + L+
Sbjct: 814 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 850
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H + ++ K AEA L M CG + YN ++ +NG ++ +E+
Sbjct: 831 TFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM 890
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+ ++ P++ TY + + A ++ N+ EK +L++
Sbjct: 891 RHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 927
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 146/366 (39%), Gaps = 38/366 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++ QN +S EA L+E+M G Y ++ + G + + L+ +
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N PD+ YN + ++ E AE+ + +++K + PD +YS L Y K
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS------------- 212
EKA L++M + N Y+ LL Y ++V I + M+
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636
Query: 213 ------------LFAKMNDAE----------YTCVISSLVKLGEFEKAENIYDEWESISG 250
F + + E Y+ +IS L K+ + EKA + DE
Sbjct: 637 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
N L+ + + A + ++ ++ KG+ P T+ L G K G + +
Sbjct: 697 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFD 756
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTY 370
+K + R PD + + D++ A L + N G+ ++++L+R +
Sbjct: 757 LYKDMLD--RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGF 814
Query: 371 AKAGKM 376
K G++
Sbjct: 815 CKRGRL 820
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 147/366 (40%), Gaps = 18/366 (4%)
Query: 24 QALQTRAR----ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+ L T R E ++ + + PD T S L+H Y + + +A+ L+++M G
Sbjct: 533 KGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLK 592
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKA 136
Y +L Y + +KV +LQ L PD Y + + + + E A
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 652
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E++K + PD YS+L S KM EKA L EM K V Y++L+ +
Sbjct: 653 LTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 712
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G ++ +++ N YT +I K G+ A ++Y + D V
Sbjct: 713 SGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFV 772
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM---EKVLECFK 313
N+L + LE A + +G + + L G+ K+G++ EK+L
Sbjct: 773 YNVLATGCSDAADLEQALFLTEEMFNRGYAH-VSLFSTLVRGFCKRGRLQETEKLLHVMM 831
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL--RNAGHVSTEIYNSLLRTYA 371
R+ VP+ + + + + G + A + L + A ST+ ++ L
Sbjct: 832 D-----REIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMI 886
Query: 372 KAGKMP 377
G +P
Sbjct: 887 NKGLIP 892
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 1/223 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+ L + D ++ +E+++ + + + VTYN+ ++ E A E+
Sbjct: 248 YSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV 307
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +Y L + K ++A L EM + N V Y++L+ + G
Sbjct: 308 DYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAA 367
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E I +M+S + N Y +I L K+G+ +A + +E + D + L+
Sbjct: 368 EAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLM 427
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ + A N + GI P T+ ++ G + G+
Sbjct: 428 QGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGE 470
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 127/329 (38%), Gaps = 4/329 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ ++ EA E+M + G Y ++N G+L + +L E+
Sbjct: 282 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM 341
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+VV Y + + A E+ + P+ I Y L K+
Sbjct: 342 SCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQL 401
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A+ L EM K R + Y L+ + KD + +M + N Y +
Sbjct: 402 GRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ L + GE ++A N+ +E S + + L+ + + +A + +
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + L G G++E+ E + + R VPD + + + +++ A
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQV--QKRGLVPDEFTYSGLIHGYCKTRNLEKA 579
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
+ LL + N+G + + Y LL Y K+
Sbjct: 580 DQLLQQMLNSGLKPNADTYTDLLEGYFKS 608
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 134/297 (45%), Gaps = 6/297 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y QL+K + + L+ + P TY L L A + AE E++
Sbjct: 168 YNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQ 227
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K + P Y+ +K EKA + M+K CR N Y+ ++++Y
Sbjct: 228 KNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPM 287
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
L+++ +M ++ K N YT ++++ + G EKAE +++E + D N L+
Sbjct: 288 SSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 347
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK-AIGSVR 320
AY + A ++ + G +P ++ +L Y + G ++ F++ +R
Sbjct: 348 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMR 407
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ H L+ +A+ K G++ E ++ L +G T N++L Y +AG++
Sbjct: 408 PTMKSHMLLLSAHAK---SGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRL 461
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 145/333 (43%), Gaps = 11/333 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L+ +Y Q ++ +AE++ + E + Y +L Y ++GQL + ++ E++KN
Sbjct: 171 LIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNG 230
Query: 111 SPDVVT-YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P T YN +L E A + + +KK + + +Y+ + ++Y K + P +
Sbjct: 231 LPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSL 290
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM+ C+ N Y++L++ + G ++ ++++M + + Y ++ +
Sbjct: 291 KVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 350
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G + A I+ E + D NIL+ AY + AE+ + L +G++P
Sbjct: 351 SRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTM 410
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ LL + K G + + E + S + PD + A N G +D E LL
Sbjct: 411 KSHMLLLSAHAKSGNVARCEEVMAQLHKSGLR--PDTFALNAMLNAYGRAGRLDDMERLL 468
Query: 350 VTLRNAGHV--------STEIYNSLLRTYAKAG 374
+ G T YN L+ Y +AG
Sbjct: 469 GAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAG 501
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 154/379 (40%), Gaps = 11/379 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + + AE ++ +M + G YN L+ + +K ++ Q
Sbjct: 201 DTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQR 260
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KK + TY L + ++ K F E+K P+ +Y+ L + + + L
Sbjct: 261 MKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGL 320
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +EM++ + AY++L+ Y+ G I+ M + + + A Y
Sbjct: 321 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNI 380
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G ++AE + E + + +LL+A+ + E +L G
Sbjct: 381 LVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSG 440
Query: 285 IKPCYTTWELLTWGYLKKGQ---MEKVLECFKK--AIGSVRKWVPDHRLITAAYNKLEEQ 339
++P + Y + G+ ME++L ++ + PD N
Sbjct: 441 LRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRA 500
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQ 396
G +D E L G + + + S + YA+ + L I E M DA T
Sbjct: 501 GYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTA 560
Query: 397 KVL--KITSEMPVSEVSSI 413
KVL + E V +V++I
Sbjct: 561 KVLLAACSDERQVEQVTAI 579
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 10/250 (4%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE + PD + AL+ +Y + A + M G YN +++
Sbjct: 325 EEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDA 384
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + QELK+ P + ++ L L+A A + E+ +L K+ + PD
Sbjct: 385 YGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPD 444
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK-------NRVAYSSLLSLYTNMGYKD 201
+ + + + Y + + L ME+ + Y+ L+++Y GY D
Sbjct: 445 TFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLD 504
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ ++ + + + +T I + + E+ + I++E D +LL
Sbjct: 505 RMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLL 564
Query: 262 AAYINRNQLE 271
AA + Q+E
Sbjct: 565 AACSDERQVE 574
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL ++ ++ A E +M ++ + G N MLN Y G+LD + ++L +++
Sbjct: 416 LLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGG 475
Query: 111 S--------PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
PD TYN+ + + E AF L + D +++++ Y +
Sbjct: 476 DDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARK 535
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM----SLFA 215
+ + +EM C + LL+ ++ ++V I + M +LFA
Sbjct: 536 KEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDAKTLFA 592
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 47 TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYI----SNGQLDKVPQ 101
T + LL +K++++A + ++ +M+E G + YN++L S L+ +
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M + + PDVV+YN L + D + A + E+ I PD ++YS++ + K
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +KA L M K + + Y+S+L Y + G E + KKM S + N
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +++ L K G +A I+D D LL Y + L + + +V
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
GI+P + + +L Y K+ ++++ + F K
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 1/273 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S+L++ +N +S EA + + M++ G Y +L Y + G L ++ +L +
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N PD +N+ + A A Q + A F ++++ ++P+ + Y T+ + K
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A ++M N + Y+SL+ D+ + +M+ +N + +
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I S K G ++E ++D I D N L+ +++ A +V+ G+
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
KP T+ L GY + +M+ L FK+ + S
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 134/312 (42%), Gaps = 5/312 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE + D+ P+ ++L+H K +AE L+ +M + G + +N +++ +
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++ + ++ + + PD++TYN + C + A K + + PD +
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y TL + Y ++ + A KEM N + Y+ +L + ++ +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ + Y ++ L K ++A ++ + R NI++ A + ++
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A+ + G+ P T+ L+ +++G +E++ + F D R++
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM--EENGCSADSRMLN 730
Query: 331 AAYNKLEEQGDI 342
+ KL ++GDI
Sbjct: 731 SIVRKLLQRGDI 742
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 125/306 (40%), Gaps = 40/306 (13%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T S+++ + + + +A ++ M + G + + YN +L+ Y S+GQ
Sbjct: 233 LPDVV----TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288
Query: 98 KVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST-- 154
+ L++++ + P+VVTY+ + A K F + K ++PD +Y T
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348
Query: 155 ---------------------------------LTSLYIKMELPEKAATTLKEMEKRTCR 181
L Y K E ++A +M +
Sbjct: 349 QGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLN 408
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N V Y +++ + G D+ + +++M+ N YT +I L +++KAE +
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
E + N ++ ++ ++ +E ++ +V G+KP T+ L G
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 302 KGQMEK 307
G+M++
Sbjct: 529 AGKMDE 534
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 4/298 (1%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y+ ++N Y G+L KV +++QE++ K P++ TYN + + AE+ E
Sbjct: 11 VSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLRE 70
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ I PD + Y+TL + K+ + A EMEK+ + +AY++++ G
Sbjct: 71 MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E +++ KM S + ++ YT +I K GE EKA +++++ T +
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L Q++ A + + KG++ T+ L G K G + + ++ ++ V
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM--EV 248
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD T + + G++ A LL + + G T I +N L+ + +G +
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 3/231 (1%)
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD +SYST+ + Y +K ++EM+ + + N Y+S++ L G D+ R+
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++M++ + YT +I KLG + A ++DE E D ++
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
++ A+ +N++ ++G++P T+ L GY K G+MEK + + S P+
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS--GLTPNV 185
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
TA + L + G +D A LL + G ++ YNSL+ K+G +
Sbjct: 186 VTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 132/324 (40%), Gaps = 25/324 (7%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVV 115
++ K +AE ++ +M G + + Y +++ + G + ++ E+ K+ PD +
Sbjct: 57 KSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFI 116
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
Y + A+K F ++ ++PD ++Y+TL Y K EKA + +M
Sbjct: 117 AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ N V Y++L +G D + +M ++N Y +++ L K G
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+A + +E E D L+ AY ++ A ++ +G++P T+ +L
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI--TAAYNKLEEQGDIDGAEHLLVTLR 353
G+ G +E + W+ + ++ T YN L +Q +R
Sbjct: 297 MNGFCMSGMLEDG--------ERLLAWMLEKGIMPNTTTYNSLMKQ----------YCIR 338
Query: 354 NAGHVSTEIYNSLLRTYAKAGKMP 377
N +TEIY + G MP
Sbjct: 339 NNMRCTTEIYKGM----CARGVMP 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PDVV+Y+ + + + K E++ + P+ +Y+++ L K +
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+EM + + V Y++L+ + +G +++ +M + YT VI
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L + G+ +A+ ++++ S D L+ Y ++E A S +N++V G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G K GQ++ E + G + + + N L + G+I A
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCG--KGLQLNICTYNSLVNGLCKSGNIRQAVK 241
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
L+ + AG + T + +L+ Y K G+M
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEM 271
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 20/353 (5%)
Query: 13 AQSYRQRVAQAQALQTRARENFFENLPDKMRGPD----TCSALLHSYVQNKKSAEAEALM 68
AQS +++A L T++ + L D PD S L+ Y K EA +
Sbjct: 97 AQSLLEKIAYRDFLSTQSVLSALVRLHDD---PDINSHVFSWLVIVYANTKMKQEAIQVF 153
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-----NTSPDVVTYNLWLAA 123
E M GF P+ H + +++ D++ M+ ++ K ++ YN+ + A
Sbjct: 154 EHMMVNGFR----PHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHA 209
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
C D E A+ E++ + PD +Y+TL SLY K + +A + ME+ + +
Sbjct: 210 CCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPD 269
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y+SL+ + G E +R++K++ A N YT +I +L + ++A + +
Sbjct: 270 IVTYNSLIHGFCKEGRMREAMRLFKEIRD--ATPNHVTYTTLIDGYCRLNDLDQALRLRE 327
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
E E+ N +L ++ A N + K I+P T L Y K G
Sbjct: 328 EMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIG 387
Query: 304 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
M+ L+ + + + K D A + + ++DGA+ LL+++ +AG
Sbjct: 388 DMKSALKVKNRMVEAGLKL--DQFTYKALIHGFCKIREMDGAKELLLSMLDAG 438
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 146 DPDWIS--YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
DPD S +S L +Y ++ ++A + M R + A + LL+ D V
Sbjct: 125 DPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMV 184
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++KKM + + N Y +I + K G+ EKA+N+ E ES D N L++
Sbjct: 185 WKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISL 244
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + A S +R+ +GIKP T+ L G+ K+G+M + + FK+ +R
Sbjct: 245 YCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKE----IRDAT 300
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
P+H T + D+D A L + G T + YNS+LR + G++
Sbjct: 301 PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRI 354
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 110/263 (41%), Gaps = 5/263 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L+H + + + EA L +++ + + Y +++ Y LD+ ++
Sbjct: 268 PDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTLIDGYCRLNDLDQALRL 325
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E++ + P VVTYN L A K E+ + KI+PD ++ +TL + Y K
Sbjct: 326 REEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCK 385
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A M + + ++ Y +L+ + + D + M+ +
Sbjct: 386 IGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCT 445
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ ++ E + DE+ D + L+ + R Q++ A+ ++ +
Sbjct: 446 YSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQ 505
Query: 282 TKGIKPCYTTWELLTWGYLKKGQ 304
KG + L + Y K G+
Sbjct: 506 EKGTLGDSVIYTSLAYAYWKLGK 528
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 3/241 (1%)
Query: 27 QTRARE--NFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
+ R RE F+ + D T + L+ Y + +A L E+M G + YN
Sbjct: 283 EGRMREAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYN 342
Query: 85 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+L G++ ++L E+ +K PD VT N + A D ++A K + +
Sbjct: 343 SILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEA 402
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ D +Y L + K+ + A L M + YS L+ Y N ++ V
Sbjct: 403 GLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAV 462
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
L++ + + ++ + Y +I K + + A+ I+ + GD + L A
Sbjct: 463 LKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYA 522
Query: 264 Y 264
Y
Sbjct: 523 Y 523
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 140/317 (44%), Gaps = 4/317 (1%)
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLW 120
EA AL +M G + YN +++ Y G L++V Q++ E++K+ + DVVTYN
Sbjct: 217 VEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNAL 276
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ + E A F E+K+ + + +++ST + K L ++A +M R
Sbjct: 277 INCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGM 336
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
N Y+SL+ G D+ + + +M+ N YT ++ L K G+ +A+N
Sbjct: 337 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADN 396
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ E + + L+ + N E A N++ KG++ + + L WG
Sbjct: 397 VLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLC 456
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
K ++++ K G + P+ + T + L + G A LL + ++G
Sbjct: 457 KDQKVDEAKSLLHKMAGCGLR--PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPN 514
Query: 361 EI-YNSLLRTYAKAGKM 376
+ Y +L+ KAG +
Sbjct: 515 VVTYCALIDGLCKAGSI 531
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 1/233 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
L+ +++K EA++L+ KM+ CG + Y +++ G+ + +L + L
Sbjct: 449 GTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILD 508
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P+VVTY + A F ++++ +DP+ +Y+ L + K+ K
Sbjct: 509 SGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNK 568
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + EM + ++V Y+SL+ Y + + KM+ +++ YTC IS
Sbjct: 569 AMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFIS 628
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+ ++A + E T D V N L+ Y +E A S N +
Sbjct: 629 GFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%), Gaps = 9/306 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ + K AEA+ ++ M G L Y +++ + N ++ +L ++
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K DV Y + + A+ ++ + P+ + Y+T+ K
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L ++ + N V Y +L+ G E + + KM L N YT +
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G KA ++ +E + D V L+ Y+ + L+ A + +++ G+
Sbjct: 557 IDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616
Query: 286 KP---CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+ CYT + G+ M++ + IG+ PD + K ++ G++
Sbjct: 617 QLDLYCYTCF---ISGFCNMNMMQEARGVLSEMIGT--GITPDKTVYNCLIRKYQKLGNM 671
Query: 343 DGAEHL 348
+ A L
Sbjct: 672 EEASSL 677
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 141/336 (41%), Gaps = 6/336 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L+ Y + E E L+ +M + G + YN ++N + G+++K
Sbjct: 233 PDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+K+ +VVT++ ++ A + + A K F +++ + P+ +Y++L K
Sbjct: 293 FGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 352
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A L EM + N V Y+ ++ G E + M K N+
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELL 412
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT +I E+A ++ ++ ++ D + L+ +++ A+S +++
Sbjct: 413 YTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G++P + + K G+ + + K + S + P+ A + L + G
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDS--GFQPNVVTYCALIDGLCKAGS 530
Query: 342 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
I A +R G + + Y +L+ + K G +
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSL 566
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
NH+L N Q V ++ L P+V T+N+ + + + A F+ +K
Sbjct: 173 NHILLRLARNRQGGLVRRLFDLLP---VPNVFTFNIVIDFLCKEGELVEARALFVRMKAM 229
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
PD ++Y++L Y K E+ + EM K C + V Y++L++ ++ G ++
Sbjct: 230 GCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKA 289
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ +M N ++ + + K G ++A ++ + + L+
Sbjct: 290 YSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDG 349
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+L+ A + +V +G+ P T+ ++ G K+G++
Sbjct: 350 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 158/393 (40%), Gaps = 67/393 (17%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP------------------LPYNHM 86
P ++L+HSY K A A L+ +M+ CG CP LP +
Sbjct: 346 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG---CPPGYVVYNIFIGSICGQEKLPSPDL 402
Query: 87 LNLY------------------ISN--------GQLDKVPQMLQE-LKKNTSPDVVTYNL 119
L+L ++N G+ DK Q+++E ++K PD TY+
Sbjct: 403 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 462
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ E A F E+K + PD +Y+ L + K L E+A +EM
Sbjct: 463 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 522
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C V Y++L+ Y + I+ +M+ + ND Y ++ L K G KA
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582
Query: 240 NIYDEWESISGTGDPR-----------VPNI-----LLAAYINRNQLEMAESFYNRLVTK 283
+Y + S + D PN+ L+ ++++ A + +++
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 642
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G +P + ++ L G+ K G+++ E F + ++P T+ +++ + G +D
Sbjct: 643 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC--GYLPSVHTYTSLIDRMFKDGRLD 700
Query: 344 GAEHLLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
A +L L+++ + Y +++ + G+
Sbjct: 701 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 733
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 86/209 (41%), Gaps = 17/209 (8%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H+Y++ K+ +A + +M + G + Y +++ G + K ++ +L
Sbjct: 529 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588
Query: 107 -----------------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +P+VVTY + + + A + + + +P+
Sbjct: 589 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 648
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I Y L + K + A +M K + Y+SL+ G D +++ +
Sbjct: 649 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 708
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
M+ N YT +I L ++GE EKA
Sbjct: 709 MLKDSCTPNVVTYTAMIDGLCRIGESEKA 737
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/303 (17%), Positives = 106/303 (34%), Gaps = 52/303 (17%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYN 118
K +A L+++M GF+ Y+ ++ +++K + QE+K +PDV TY
Sbjct: 437 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 496
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + + E A+ F E++ P ++Y+ L Y+K + +A M
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK----------------------------- 209
CR N V Y +L+ G + ++ K
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616
Query: 210 ----------------------MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
M+S + N Y +I K G+ + A+ ++ +
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
L+ +L++A ++++ P T+ + G + G+ EK
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736
Query: 308 VLE 310
L+
Sbjct: 737 ALK 739
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM-LQE 105
T AL+ + K A L++ M G + Y+ +++ + G++D ++ LQ
Sbjct: 615 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 674
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P V TY + + A K ++ K P+ ++Y+ + ++
Sbjct: 675 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 734
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLL 191
EKA L ME++ C N V Y++L+
Sbjct: 735 EKALKLLSLMEEKGCSPNVVTYTALI 760
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y +++ ++D ++L L P+ + Y+ + ++A++ FL+
Sbjct: 614 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 673
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ K P +Y++L K + A L +M K +C N V Y++++ +G
Sbjct: 674 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 733
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
++ L++ M N YT +I L
Sbjct: 734 SEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 148/347 (42%), Gaps = 5/347 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ Y K EA L+E+ G + + YN +L ++++ ++ +E+K+
Sbjct: 339 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ P+V TYN+ + + A + ++++ + P+ ++ + + K + E+A
Sbjct: 399 DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEA 458
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ + M+ + C N V +SSL+ G D+ +++KM+ YT +I S
Sbjct: 459 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 518
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K G E IY E + D + N + + E + + + G P
Sbjct: 519 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD 578
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
++ +L G +K G + E F + V D A + + G ++ A L
Sbjct: 579 ARSYSILIHGLVKAGLANETYELFYAM--KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 636
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
L ++ GH T + Y S++ AK ++ ++ E + + ++++
Sbjct: 637 LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLN 683
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 141/313 (45%), Gaps = 9/313 (2%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACA 125
L +M E G+ + ++ ++ G++D +L E+K N+ D+V YN+ +
Sbjct: 217 LFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFG 276
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ + K F E+K + PD ++Y+++ + K ++A +++E+
Sbjct: 277 KAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAY 336
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++++ Y + G DE + ++ + + + Y C+++ L K E+A I++E
Sbjct: 337 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396
Query: 246 ESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ P VP NIL+ +L A + + G+ P T ++ K
Sbjct: 397 KR---DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 453
Query: 304 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI- 362
++E+ F+ V P+ ++ + L + G +D A L + + GHV I
Sbjct: 454 KLEEACSIFEGMDDKV--CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 511
Query: 363 YNSLLRTYAKAGK 375
Y SL+R++ K G+
Sbjct: 512 YTSLIRSFFKCGR 524
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 36/272 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
S L+H V+ + E L M E G + YN +++ + +G+++K Q+L+E+K
Sbjct: 583 SILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 642
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM----- 162
K P VVTY + A + + A F E K I + + YS+L + K+
Sbjct: 643 KGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDE 702
Query: 163 ------ELPEKAAT------------------------TLKEMEKRTCRKNRVAYSSLLS 192
EL +K T + M+ C N++ YS L++
Sbjct: 703 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILIN 762
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ ++ W++M L K N YT +IS L K G +A ++ +++ G
Sbjct: 763 GLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 822
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
D N ++ + N+ A + + KG
Sbjct: 823 DSASYNAMIEGLSSANKAMDAYALFEETRLKG 854
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/345 (18%), Positives = 138/345 (40%), Gaps = 11/345 (3%)
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAA-CASQNDKETAEK 135
+ CP YN +L + N + D + ++L+E+ + ++ L A C A
Sbjct: 122 VHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFD 181
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
++K K P + +Y+ L ++ P+ +M++ N +++L+ ++
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFA 241
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G D L + +M S + Y I K G+ + + + E +S D
Sbjct: 242 REGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF--K 313
++ N+L+ A + +L PC + + GY G+ ++ +
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKA 373
KA GS+ + + ++T L ++ ++ A + ++ + YN L+ +
Sbjct: 362 KAKGSIPSVIAYNCILTC----LGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCRE 417
Query: 374 GKM--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
GK+ L I + M++ + + T ++ ++ + E SIF
Sbjct: 418 GKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIF 462
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 141/333 (42%), Gaps = 17/333 (5%)
Query: 33 NFF---ENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
N+F E +K+ P+ ++LL +N + E ++E+MS GF ++
Sbjct: 110 NYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVAN 169
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ + +L + ++Q ++K P Y + + A + + + F ++++ + +
Sbjct: 170 CVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVN 229
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++TL ++ + + A + L EM+ + + V Y+ + + G D + +
Sbjct: 230 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFH 289
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-----NILLAA 263
+M S +D YT +I L K ++A ++++ E + +VP N ++
Sbjct: 290 EMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQ-----NRKVPCAYAYNTMIMG 344
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + + + A R KG P + + KK ++E+ L F++ V
Sbjct: 345 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNV 404
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
P + ++ + L +G ++ A + + AG
Sbjct: 405 PTYNILI---DMLCREGKLNAALEIRDDMERAG 434
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 162/384 (42%), Gaps = 23/384 (5%)
Query: 15 SYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSEC 74
S+ +A+ Q L E + +P+ RG LL +YV +AE + +M +
Sbjct: 213 SHLDLIAKVQGLHKA--ETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDL 270
Query: 75 GFLKCPLPYNHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKET 132
F Y+ ML LY I ++ + +++ K+N P TY + + A ND
Sbjct: 271 EFPMTTFAYDQMLILYKRIDRRRIADILSLME--KENVKPRPFTYKILIDAKGLSNDISG 328
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
E+ +K I D + L Y+ L +KA LK E+ + +R LL
Sbjct: 329 MEQVVDTMKAEGIKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPCRYLLP 388
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESI 248
LY + +DEV R+W+ N E I + KL ++AE I+D W+ +
Sbjct: 389 LYGELQMEDEVRRLWEICE---PNPNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRL 445
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
S + + ++ Y + L + N++ G + W+ + Y++ G++EK
Sbjct: 446 S----TKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKLYVEAGEVEKA 501
Query: 309 LECFKKAIG--SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNS 365
KA+ ++ +R + Y + +GD+ +E + +R +G+ + +
Sbjct: 502 DSFLFKAVKQYGMKPLFDSYRTLMVHYAR---KGDVHNSEKIFHKIRQSGYPTHFGQFVT 558
Query: 366 LLRTYAKAGKMPLIIVERMQKDNV 389
L++ Y A + ERM DNV
Sbjct: 559 LVQAYLNAKTPAYGMRERMMADNV 582
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 162/371 (43%), Gaps = 15/371 (4%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F ++ K P S AL+ +Y + K+ +AE++ +M G L Y +L +
Sbjct: 160 ERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKI 219
Query: 90 YISNGQLDKVPQMLQEL----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
++ + + + + L K PD +++ + + E A K F +++ +
Sbjct: 220 FVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGV 279
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
++Y++L S + + + T +M++ R + V+Y+ L++ Y ++E L
Sbjct: 280 PQSTVTYNSLMSFETNYK---EVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALA 336
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
++++M+ + Y ++ + G ++A ++ T D +L+AY+
Sbjct: 337 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYV 396
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
N + +E AE F+ RL G +P T+ L GY K +EK++E +++ V +
Sbjct: 397 NASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEM--QVHGIKAN 454
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAG----HVSTEIYNSLLRTYAKAGKMPLIIV 381
+ TA + + D A + G +T I SL +T A+ + L++
Sbjct: 455 QAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEAEKEEANLLVG 514
Query: 382 ERMQKDNVQMD 392
+ N QMD
Sbjct: 515 YSSKYSNGQMD 525
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 134/342 (39%), Gaps = 61/342 (17%)
Query: 81 LPYNHMLNLYISNGQLDK---VPQMLQELKKNTSPDV--VTYNLWLAACASQNDKETAEK 135
LP + +L + QL K V ++L+ L+ D + + + + A Q D AE+
Sbjct: 102 LPRDLVLGTLVRFKQLKKWSLVSEILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAER 161
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F ++ K P IS++ L Y K + KA + + M + + Y +L ++
Sbjct: 162 VFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFV 221
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAE----------YTCVISSLVKLGEFEKAENIYD-- 243
G K +K+ F + D E + +I K G +EKA I+
Sbjct: 222 E-GNK------FKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLM 274
Query: 244 --------------------EWESISGTGD--------PRVPN--ILLAAYINRNQLEMA 273
++ +S T D P V + +L+ AY + E A
Sbjct: 275 RERGVPQSTVTYNSLMSFETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEA 334
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPDHRLITA 331
+ + ++ G++P + + +L + G +++ FK S+R + PD T
Sbjct: 335 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK----SMRRDRCTPDICSYTT 390
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ D++GAE L+ G + Y +L++ YAK
Sbjct: 391 MLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAK 432
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 133/280 (47%), Gaps = 5/280 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK--VPQMLQEL 106
+A++ Y ++ + +A L++ M + + +N ++N +G L ++L E+
Sbjct: 225 NAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEV 284
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD +TYN ++AC+ ++ + A F E+ ++ PD +Y+ + S++ +
Sbjct: 285 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 344
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A KE+ ++ + + V Y+SLL + G + V R+ ++++ + + Y +
Sbjct: 345 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 404
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G + A +YDE +I T D +L+ + +++ A + G+
Sbjct: 405 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 464
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
KP T+ L Y K G+ + F + + S K PD
Sbjct: 465 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVK--PD 502
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F+ L +K PD T ++LL+++ + E + E++ + GF K + YN M+++
Sbjct: 348 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 407
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+LD + E++ +PD VTY + + + + A K E+ + P
Sbjct: 408 YGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 467
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++S L Y K + A T M + + +R+AY +L ++ +++ +++
Sbjct: 468 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 527
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+ K +D Y ++++L K E ++ E + + E++ + +IL+ A
Sbjct: 528 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA----E 583
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD-HR 327
+ S R +G +P + + Y K G+ EK L + +R+ VP+ H
Sbjct: 584 CISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE----WIRQHVPNSHN 639
Query: 328 LIT 330
LI+
Sbjct: 640 LIS 642
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 9/270 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKM--SECGFLKCPL-PYNHMLNLYISNGQLDKV 99
PD T + L+ + Q +A A+ E+M SEC + L YN M++++ G+ +
Sbjct: 291 PDAITYNTLISACSQGSNLDDAVAVFEEMIASEC---RPDLWTYNAMVSVHGRCGKAQEA 347
Query: 100 PQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
M +EL +K PD VTYN L A A + D E E+ EL K D I+Y+T+ +
Sbjct: 348 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 407
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y KM + A EM C + V Y+ L+ M E ++ ++M K
Sbjct: 408 YGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 467
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
++ +I + K G + AE +D D ++L + ++ Y
Sbjct: 468 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 527
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
++ G KP +++L K + +++
Sbjct: 528 AMIKDGYKPDDGLYQVLLAALAKGNEHDEI 557
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 158/377 (41%), Gaps = 23/377 (6%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
ENF + L + G D +AL+H+Y ++ A A+ + M + G L N M+
Sbjct: 768 ENFVKGLKQE-SGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRA 826
Query: 90 YISNGQLDK---VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
I +G+LD+ V Q LQ+L S V L L A A D K + +K
Sbjct: 827 LIVDGRLDELYVVVQELQDLDIKISKSTVL--LMLEAFAKAGDVFEVMKIYNGMKAAGYL 884
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ Y + SL + + EME + + V ++LL +YT G D + +
Sbjct: 885 PNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEV 944
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN--ILLAAY 264
+ ++ + ++ Y +I + F E +E P++ + ILLAA
Sbjct: 945 YHSILEAGLEPDEDTYNTLIVMYSR--NFRPEEGFTLLYEMGKRGLTPKLESYKILLAAS 1002
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY---LKKGQMEKVLECFKKAIGSVRK 321
E A+ + + TKG + + + ++ Y + E +L K+ +
Sbjct: 1003 GKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKE--DGIEP 1060
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII 380
+ ++ +Y G D AE +L +L+++ +ST Y+++L Y + L I
Sbjct: 1061 TIATMHILMTSYGT---SGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGI 1117
Query: 381 VE--RMQKDNVQMDAET 395
+ M++D V+ D +
Sbjct: 1118 TKLLEMKRDGVEPDHQV 1134
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 126/315 (40%), Gaps = 11/315 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L ++ + E + M G+L Y M++L N + V M+ E+
Sbjct: 854 TVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEM 913
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD+V N L + + + + + + ++PD +Y+TL +Y + P
Sbjct: 914 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 973
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ T L EM KR +Y LL+ ++ ++++M + ++N + Y +
Sbjct: 974 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 1033
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ KAE++ + +IL+ +Y + AE N L + +
Sbjct: 1034 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNL 1093
Query: 286 KPCYTTWELLTWGYLKKGQ----MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ + + YL+ + K+LE + + PDH++ T+
Sbjct: 1094 EISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVE------PDHQVWTSFIRAASLCEQ 1147
Query: 342 IDGAEHLLVTLRNAG 356
D A LL +L++ G
Sbjct: 1148 TDDAILLLKSLQDCG 1162
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 57/320 (17%), Positives = 118/320 (36%), Gaps = 107/320 (33%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N M+ +Y +G+ D Q+L ++ ++ PD+V++N + A A
Sbjct: 224 FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAK--------------- 268
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
S + + +EL L E+ + R + + Y++L+S + D
Sbjct: 269 -----------SGCLAAGVALEL-------LHEVRQAGLRPDAITYNTLISACSQGSNLD 310
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ + ++++M++ + + Y ++S + G+ ++A
Sbjct: 311 DAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA----------------------- 347
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
E + LV KG +P T+ L + + K+G +E+V ++
Sbjct: 348 ------------ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEE------- 388
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI-- 379
L+ A + K DG YN+++ Y K G++ L
Sbjct: 389 ------LVKAGFRK-------DGI----------------TYNTMIHMYGKMGRLDLALG 419
Query: 380 IVERMQKDNVQMDAETQKVL 399
+ + M+ DA T VL
Sbjct: 420 LYDEMRAIGCTPDAVTYTVL 439
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 130/296 (43%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+++++ + +G +D+ +++ E++++ + Y+ + D++ F LK
Sbjct: 385 YSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 444
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P ISY L +LY+K+ KA KEME + N YS L+S + ++
Sbjct: 445 ECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFT 504
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
RI+++M+ + + A Y +I + K+G ++A I ++ + R ++
Sbjct: 505 NAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPII 564
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ ++ A + + G P T+ L G ++K Q+E+ + K S+
Sbjct: 565 EGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKM--SIAG 622
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
P+ T GDI A ++ G + IY +LLR K+G+M
Sbjct: 623 ITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRM 678
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 98/240 (40%), Gaps = 1/240 (0%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 125
+++ M G + YN +++ I Q+++ +L ++ +P+ TY + + A
Sbjct: 579 ILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYA 638
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ D A + F ++K+ + D Y TL K + A +EM + +N
Sbjct: 639 ATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTF 698
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y+ L+ + G E + K+M N YT I++ K G+ ++A+ + DE
Sbjct: 699 VYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEM 758
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + + L+ + + + A + + G+KP + L L + +
Sbjct: 759 SDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATV 818
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 113/283 (39%), Gaps = 7/283 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + L + A + DK A F ++ I+P+ +++L Y A +
Sbjct: 275 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 334
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+EM+ V YS L+S + + ++K+ + +N Y+ +I + +
Sbjct: 335 TEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQ 394
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G ++AE + E E + ++ Y + + RL P +
Sbjct: 395 SGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 454
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ L Y+K G++ K + K+ S ++ + ++ + + L D A +
Sbjct: 455 YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLH---DFTNAFRIFE 511
Query: 351 TLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
+ +G IYN L+ + K G M + I+E+MQK+ +Q
Sbjct: 512 EMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQ 554
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 87/220 (39%), Gaps = 36/220 (16%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H ++ + A +++ KMS G Y ++ Y + G + K + ++
Sbjct: 594 TYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKI 653
Query: 107 KKNT-SPDVVTYNLWLAAC-----------------------------------ASQNDK 130
K+ DV Y L AC A + D
Sbjct: 654 KEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDV 713
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A ++K+ + P+ +Y++ + K ++A T + EM + N Y++L
Sbjct: 714 WEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTL 773
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ + D L+ +++M K ++A Y C+++SL+
Sbjct: 774 IKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLL 813
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 36/281 (12%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
+++EA+ +++K E GF+ L YN +++ +I G + +E+ + SP+V+TY
Sbjct: 573 RTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYT 632
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ N+ + A K E++ ++ D +Y L + K + E A+ E+
Sbjct: 633 TLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS-------------------------- 212
N V Y+SL+S Y N+ + L + K+M+
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA 752
Query: 213 --LFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
L+++M+ YT +I+ L G+ E A+ I E E S T + + N L+A
Sbjct: 753 LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAG 812
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ L+ A +N ++ KG+ P TT+++L G +K G
Sbjct: 813 HFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 156/367 (42%), Gaps = 39/367 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++LL + K +EA L +KM + G + YN M+ + G LD + +
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD----------------- 148
L P+V+TY++ + D E A F + I P
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574
Query: 149 ------------------WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
++Y+++ +IK A T +EM + N + Y++L
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ + D L++ +M + +++ A Y +I K + E A ++ E
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ + + N L++ Y N N +E A + R++ +GI T+ L G LK+G++ L+
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRT 369
+ + S + +PD + T N L +G ++ A+ +L + R++ + IYN+L+
Sbjct: 755 LYSEM--SAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAG 812
Query: 370 YAKAGKM 376
+ KAG +
Sbjct: 813 HFKAGNL 819
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 142/331 (42%), Gaps = 7/331 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
LL+SY++ K +A ++ E + N +L + N + + ++ +++ K
Sbjct: 180 LLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKG 239
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
D T ++ + A N++E A+K FLE K + D +YS + + K E A
Sbjct: 240 VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELAC 299
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M + + ++S++ G E LR+ +M+S +MN T ++
Sbjct: 300 GLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN-QLEMAESFYNRLVTKGIKPC 288
K + A +D+ +G RV +L + +N + A Y ++ K I P
Sbjct: 360 CKQDKLVSALEFFDKMNE-NGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPT 418
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
L G+LK E+ + F +A+ + + + + L ++G + A L
Sbjct: 419 VFIVNSLIRGFLKVESREEASKLFDEAVACD---IANIFTYNSLLSWLCKEGKMSEATTL 475
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKMPL 378
+ + G T++ YNS++ + + G + +
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDM 506
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 129/326 (39%), Gaps = 5/326 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ L+ Y + K A +KM+E G + Y ++ NG + K + ++K
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
KN P V N + +E A K F E I + +Y++L S K +
Sbjct: 413 KNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSE 471
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A T ++M + +V+Y+S++ + G D ++ M+ K N Y+ ++
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMD 531
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G+ E A ++D + NI + + A+ + V KG P
Sbjct: 532 GYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVP 591
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + G++K+G + L +++ S P+ T N + + D A
Sbjct: 592 VCLTYNSIMDGFIKEGSVSSALTAYREMCES--GVSPNVITYTTLINGFCKNNNTDLALK 649
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAK 372
+ +RN G + Y +L+ + K
Sbjct: 650 MRNEMRNKGLELDIAAYGALIDGFCK 675
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 151/377 (40%), Gaps = 19/377 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY--NHMLNL 89
FF+ + + P+ T + L+ +N A+A L +M CP + N ++
Sbjct: 371 FFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNI--CPTVFIVNSLIRG 428
Query: 90 YISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
++ ++ ++ E ++ TYN L+ + A + ++ + P
Sbjct: 429 FLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTK 488
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+SY+++ + + + AA+ +M + N + YS L+ Y G + ++ +
Sbjct: 489 VSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDR 548
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ +D Y I+ L K+G +A+++ ++ N ++ +I
Sbjct: 549 MVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGS 608
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A + Y + G+ P T+ L G+ K + L K +R L
Sbjct: 609 VSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLAL----KMRNEMRN--KGLELD 662
Query: 330 TAAYNKLEE----QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVE 382
AAY L + + DI+ A L L + G ++ IYNSL+ Y M L + +
Sbjct: 663 IAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQK 722
Query: 383 RMQKDNVQMDAETQKVL 399
RM + + D +T L
Sbjct: 723 RMLGEGISCDLQTYTTL 739
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 145/333 (43%), Gaps = 7/333 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQMLQEL 106
S +L + N S A L++ M++ G P + Y+ +++ + + G+ K + E+
Sbjct: 232 SIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEM 291
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PDVVTYNL + A + AE ++ PD ++YS + Y +
Sbjct: 292 TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRL 351
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++AA +EM+KR N V +S L+ G E + M + K + Y +
Sbjct: 352 KEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTL 411
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ G F +++ +S + V IL+ AY R ++ A + + +G+
Sbjct: 412 LHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGV 471
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + + + G++ +E F + + R P+ + ++ G + A
Sbjct: 472 SPDVVTYSTVISTFSRMGRLTDAMEKFNQMV--ARGIQPNTAVYSSIIQGFCMHGGLVKA 529
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ L+ + N G +I ++S++ + K G++
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 7/335 (2%)
Query: 47 TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + LL ++ EA L+ +MSE G + + Y+ +L N + +LQ
Sbjct: 194 TANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQM 253
Query: 106 LKKN---TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ K SPDVV Y+ + ++ + A F E+ + + PD ++Y+ + K
Sbjct: 254 MAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+KA L++M + + V YS ++ Y +G E +++++M N
Sbjct: 314 RAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTC 373
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
++SL K G ++A +D + D LL Y + +N + +
Sbjct: 374 NSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKS 433
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
GI + +L Y K+G ++ + F + + PD + + G +
Sbjct: 434 NGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM--QQQGVSPDVVTYSTVISTFSRMGRL 491
Query: 343 -DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
D E + +T +Y+S+++ + G +
Sbjct: 492 TDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 160/400 (40%), Gaps = 85/400 (21%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + ++ + + + +AE ++ +M+ G + Y+ M++ Y + G+L + +M
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM 357
Query: 103 LQELKK-NTSPDVVTYNLWLAA-CASQNDKETAEKAFLELKKTKIDPDWISYST------ 154
+E+KK P++VT N +LA+ C KE AE F + PD SY T
Sbjct: 358 FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE-FFDSMTAKGHKPDIFSYCTLLHGYA 416
Query: 155 -----------------------------LTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
L Y K + + A EM+++ + V
Sbjct: 417 SEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV 476
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
YS+++S ++ MG + + + +M++ + N A Y+ +I G KA+ + E
Sbjct: 477 TYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM 536
Query: 246 ESISGTGDPRVPNILLAAYINR----NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ G PR + ++ IN ++ A ++ G +P T+ L GY
Sbjct: 537 IN---KGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCL 593
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
G+M+K K+ + ++ G E +VT
Sbjct: 594 VGKMDKAF-------------------------KILDAMEVVGVEPDIVT---------- 618
Query: 362 IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
YN+LL Y K G++ L + MQ+ V+ + T ++
Sbjct: 619 -YNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 129/307 (42%), Gaps = 12/307 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDKVPQMLQ 104
S+++ + + +A+ L+ +M G P P ++ ++N +G++ +
Sbjct: 514 SSIIQGFCMHGGLVKAKELVSEMINKGI---PRPDIVFFSSVINSLCKDGRVMDAHDIF- 569
Query: 105 ELKKNTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+L + P V+T+N + + A K ++ ++PD ++Y+TL Y K
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKN 629
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
T +EM+++ + N V Y +L+ G + + +M+ + + Y
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
++ L + ++A ++ + +++ + N ++ A + E A+ + +
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G+ P +T+ ++ LK G +E F S VP RL+ L E+G+I
Sbjct: 750 SGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS--GIVPGSRLLNRIIRMLLEKGEI 807
Query: 343 DGAEHLL 349
A + L
Sbjct: 808 AKAGNYL 814
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T ++L+ Y K +A +++ M G + YN +L+ Y NG+++ +
Sbjct: 580 GVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLF 639
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+E+ +K P+ VTY + LA A K F E+ ++ Y + +
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++A +++ + + +++++ + K+E ++ + + N++ Y
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTY 759
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I +L+K G E A N++ E R+ N ++ + + ++ A ++ +++
Sbjct: 760 GVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDG 819
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEK 307
K I +T L+ + +KG+ ++
Sbjct: 820 KRILLEASTTSLMLSLFSRKGKYQE 844
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 125/269 (46%), Gaps = 5/269 (1%)
Query: 51 LLHSYVQNKKSAEAEA-LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-- 107
LL K+ EA L+ +MSE G + YN +L + + ++ ++L +
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 108 --KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P++V+YN + ++ + A FL++ I P+ ++Y+ + K ++
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A ++M + R N V Y+ L+ Y ++G EV+R+ K+M + + + Y +
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K G+ +A ++D D + I+L Y + L SF + +V GI
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
P + + ++ + KK + + ++ F K
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 115/276 (41%), Gaps = 14/276 (5%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID-------PDWISYSTLTSLYIK 161
+P+VV+YN L +N E A LEL D P+ +SY+T+ + +
Sbjct: 161 GCTPNVVSYNTLLKGFCDENRAEEA----LELLHMMADGQVRSCPPNLVSYNTVINGFFT 216
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+KA +M + N V Y+ ++ D ++++M+ + N
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT 276
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YTC+I + +G++++ + E + D +LL + + A ++ ++
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMI 336
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
KGIKP + + ++ GY KG + ++ +G+ P+H + + ++
Sbjct: 337 RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGN--GISPNHYIFNIVFCAFAKKAM 394
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
I A + +R G + Y +L+ K G++
Sbjct: 395 IGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRV 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 18/287 (6%)
Query: 101 QMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK--IDPDWISYSTLTSL 158
+M+++ +PDV TY++ + E AF + KT ++ + L L
Sbjct: 81 RMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGL 140
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM- 217
+ E L+ M + C N V+Y++LL + + +E L + M +
Sbjct: 141 CDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSC 200
Query: 218 --NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-----ILLAAYINRNQL 270
N Y VI+ G+ +KA N++ + ++ G P PN I++ +
Sbjct: 201 PPNLVSYNTVINGFFTEGQVDKAYNLFLD---MTDQGIP--PNVVTYTIVIDGLCKAQVV 255
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ AE + +++ KG++P T+ L GYL GQ ++V+ K+ S PD
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM--SAHGLEPDCFTYG 313
Query: 331 AAYNKLEEQGDIDGAEHLLVT-LRNAGHVSTEIYNSLLRTYAKAGKM 376
+ L ++G A L + +R IY +L YA G +
Sbjct: 314 LLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGAL 360
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 122/298 (40%), Gaps = 4/298 (1%)
Query: 28 TRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
T AR+ F+++ K PD +LH Y +E + ++ M G +N
Sbjct: 326 TEARK-LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNI 384
Query: 86 MLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
+ + + + + ++++ SP+VV Y + A + AE F ++
Sbjct: 385 VFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEG 444
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ P+ + +++L ++ EKA EM + N V +++++ G +
Sbjct: 445 VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQ 504
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
R+ M + + + Y +I +G+ ++A + D S+ + N LL Y
Sbjct: 505 RLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGY 564
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+++ A S + +++ GI P T+ + G K + + E + I S ++W
Sbjct: 565 CRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQW 622
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 114/264 (43%), Gaps = 7/264 (2%)
Query: 54 SYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD----KVPQMLQELKKN 109
++ + EA + KM + G + Y +++ G++D K QM+ E
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE---G 444
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+P++V + + + + E A + F E+ I P+ + ++T+ KA
Sbjct: 445 VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQ 504
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ ME+ R + ++Y++L+ + +G DE ++ M+S+ K N+ Y ++
Sbjct: 505 RLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGY 564
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G + A +++ E S T N +L + A+ Y ++T G +
Sbjct: 565 CRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSI 624
Query: 290 TTWELLTWGYLKKGQMEKVLECFK 313
T+ ++ G K +++ L+ F+
Sbjct: 625 YTYNIILNGLSKNNCVDEALKMFQ 648
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +LH + ++ +EA+ L M G YN +LN N +D+ +M Q L
Sbjct: 591 TYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSL 650
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ D++T+N+ + A KE A F + + PD +Y + I+
Sbjct: 651 CSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSL 710
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLL 191
E+ EMEK C N + + L+
Sbjct: 711 EEFDGMFSEMEKSGCAPNSLMLNFLV 736
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S AL+ + K+ EA L++ M G YN +L+ Y +G++D +
Sbjct: 517 PDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSV 576
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
QE+ N +P VVTYN L L KT+ +S LY+
Sbjct: 577 FQEMLSNGITPVVVTYNTILHG----------------LFKTR------RFSEAKELYLN 614
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
M T+ K+ T Y+ +L+ + DE L++++ + S +++
Sbjct: 615 M------ITSGKQWSIYT-------YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIIT 661
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAA--YINRNQLEMAESFYN 278
+ +I +L+K G E A N++ +IS G P V L A I LE + ++
Sbjct: 662 FNIMIGALLKDGRKEDAMNLF---ATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFS 718
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ G P L L +G + +
Sbjct: 719 EMEKSGCAPNSLMLNFLVRRLLLRGDISR 747
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 7/280 (2%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLN 88
+FE + PDTC+ ++H V+ EA L M E + CP + Y ++
Sbjct: 280 YFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTI-CPPDVVTYTSIMY 338
Query: 89 LYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y GQ + + + + P++V+YN L A AS A + F LK+ P
Sbjct: 339 SYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKP 398
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +SY++L + Y + LPEKA EM K C+ N+V+Y++L+ Y + G E + +
Sbjct: 399 DIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLL 458
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+M + + + ++++ + + K I +S + N + +Y++
Sbjct: 459 HEMEQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSL 518
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ A Y + T +KP T+ +L G K G K
Sbjct: 519 GDYKKALELYTSMRTGNVKPDAVTYNILISGSCKLGSFRK 558
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 170/404 (42%), Gaps = 16/404 (3%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSA 62
R +G +R + +V QA+ L +E + PD DT ++L+H++ + +
Sbjct: 152 RNDIYGMMIRLHARHNQVDQARGLFFEMQE--WRCKPDT----DTYNSLIHAHARAGQWR 205
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWL 121
A +M+ M YN+++N + G K ++ +++ +N PD++T+N+ L
Sbjct: 206 WAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVL 265
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRT- 179
+A + A F +K +K+ PD + + + +K+ L +A M E+RT
Sbjct: 266 SAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTI 325
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C + V Y+S++ Y+ G + ++ M++ + N Y ++ + G +A
Sbjct: 326 CPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEAL 385
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
+ + D LL AY E A +N + KP ++ L Y
Sbjct: 386 ETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAY 445
Query: 300 LKKGQMEKVLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-H 357
G +++ + + ++ V + A + + I +L ++ G
Sbjct: 446 GSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCRQPTKIG---IILAAAKSRGIQ 502
Query: 358 VSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
++T YNS + +Y G K L + M+ NV+ DA T +L
Sbjct: 503 LNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAVTYNIL 546
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 138/335 (41%), Gaps = 17/335 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SAL+ + ++ EA AL+E M+E G + YN ++ + ++D+ ++++
Sbjct: 113 SALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVA 172
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ PD++TY + D + E+ + PD ++YST+ K
Sbjct: 173 EGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 232
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM +C + Y+SL+ Y G DE +R+ KM+ + YT ++S
Sbjct: 233 AVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMS 289
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ K+G + A ++ + + + D L+ ++E A + +G P
Sbjct: 290 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE----EQGDID 343
T+ + GY K Q+ K E A R +VP+ T YN L G D
Sbjct: 350 TIYTYNCVVDGYCKANQVRKAEELV--ADFRSRGFVPN----TVTYNILVAGCCRAGRTD 403
Query: 344 GAEHLLVTLRNAGH---VSTEIYNSLLRTYAKAGK 375
A L L + G S +Y +L + G+
Sbjct: 404 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 438
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 128/333 (38%), Gaps = 42/333 (12%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
L Y +++ +L Q+LQE+ PD T + + + + + A + E
Sbjct: 40 LTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 99
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + + I+YS L K E ++A ++ M +R C V Y+S+++ +
Sbjct: 100 MLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR 159
Query: 200 KDEVLRIWKKMMS---------------LFAKMND--------------------AEYTC 224
DE ++M++ F K D Y+
Sbjct: 160 VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
VI L K G A +I++E +S N L+ Y ++ A ++V
Sbjct: 220 VIDGLCKAGRLRDAVDIFEE---MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P T+ L + K G+++ E F++ + + K PD T+ + L +G ++
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVAN--KLSPDVVTFTSLVDGLCGEGRMED 334
Query: 345 AEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
A LL + G T YN ++ Y KA ++
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQV 367
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/321 (18%), Positives = 116/321 (36%), Gaps = 41/321 (12%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
L +N ++ G+L + +++ PD +TY + + A + E+
Sbjct: 6 LLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ PD + + + + + A ++EM R N + YS+L+
Sbjct: 66 VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 125
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
DE + + + M AE C + + N +
Sbjct: 126 DEAVALVETM---------AERGCAPTVVTY--------------------------NSI 150
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ + +++ A F ++V +G P T+ L G+ K + + LE + + R
Sbjct: 151 ITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEV--TRR 208
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PL 378
+ PD + + L + G + A + + A T YNSL+ Y +AG M +
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT--YNSLIGGYCRAGDMDEAI 266
Query: 379 IIVERMQKDNVQMDAETQKVL 399
++ +M D D T L
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTL 287
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 151/346 (43%), Gaps = 6/346 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + +K P+ T + L+ + K EA ++ +MSE G + + YN +++ Y
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 91 ISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G +D ++L ++ N+ P+ TYN + + A ++ + K+ P
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y++L K+ E A L M + ++ YS + G +E ++
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + K N+ YT +I K+G+ + A ++ + + + + N+L+ +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
++ A S +++T G+KP T+ +L LK G + L+ F + + PD
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS--LGYQPDVCTY 617
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
TA + QG ++ + ++ + G + + Y L+ YA+ G
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 18/242 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + KK EA +L+ KM G + Y ++ + +G D ++ +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
PDV TY +L A SQ E + ++ + I PD ++Y+ L Y ++ L
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A LK M C+ SLY ++ I K +S +M +
Sbjct: 666 HRAFDFLKCMVDTGCKP---------SLY--------IVSILIKNLSHENRMKETRSEIG 708
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I S+ E+E A ++++ T D + L+A + + +LE A+ + + +G+
Sbjct: 709 IDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 768
Query: 286 KP 287
P
Sbjct: 769 SP 770
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%)
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
L+ L SP++ T+N + + AE ++ + + PD +Y++L + +
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ + A M ++ C++N V+Y++L+ G +E L+++ M Y
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T +I +L G +A N+++E + + +L+ N+++ A + +
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLE 310
KG+ P T+ L GY K+G ++ E
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFE 390
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
AL+ + Q ++ EA+ L+ M E G YN +L+ G + +++ + +
Sbjct: 741 GALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVE 800
Query: 109 NTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P + +Y L + + E A+ F L + D +++ L +K +L ++
Sbjct: 801 NGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDE 860
Query: 168 AATTLKEMEKRTCRKNRVAYSSLL 191
+ + ME++ C+ N + YS L+
Sbjct: 861 CSELIDIMEEKGCQPNPLTYSLLI 884
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 150/344 (43%), Gaps = 14/344 (4%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD M T +++LH Y + + EA ++KM G + Y+ ++N NG+
Sbjct: 241 MPDCM----TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 296
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ ++ + K+ PD+ TY L + +EK F + + + PD I+Y+TL
Sbjct: 297 EARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 356
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
++A L M + + V Y +L++ Y + D+ L ++K+M+S
Sbjct: 357 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 416
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMA 273
N Y ++ L A+ +Y SI+ +G + NI+L N + A
Sbjct: 417 PNIITYNIILQGLFHTRRTAAAKELY---VSITKSGTQLELSTYNIILHGLCKNNLTDEA 473
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
+ L ++ T+ ++ LK G+M++ + F A S VPD R +
Sbjct: 474 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF--AAHSANGLVPDVRTYSLMA 531
Query: 334 NKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
L EQG ++ + L +++ N + + NS++R + G +
Sbjct: 532 ENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 575
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 47 TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYI----SNGQLDKVPQ 101
T + LL +K++++A + ++ +M+E G + YN++L S L+ +
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 102 MLQELKKNTSPDVVTYNLWLAA----------CASQNDKETAEKAFLELKKTKIDPDWIS 151
M + + PDVV+YN L A DK A + + K + PD ++
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDK--AMEVLNTMVKNGVMPDCMT 246
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+++ Y P++A TLK+M N V YSSL++ G E +I+ M
Sbjct: 247 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 306
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + A Y ++ K G ++E ++D I D N L+ +++
Sbjct: 307 KRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 366
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
A +V+ G+KP T+ L GY + +M+ L FK+ + S
Sbjct: 367 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 413
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 14/268 (5%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNG----- 94
PD S LL +S EA L+ M++ P + YN +LN + G
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKL 220
Query: 95 ---QLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+DK ++L + KN PD +TYN L S + A +++ ++P+ +
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+YS+L + K +A M KR + Y +LL + G E +++ M
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLM 340
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + K + Y +I G+ ++A + S+ D L+ Y +++
Sbjct: 341 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 400
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ A + + +V+ G+ P T+ ++ G
Sbjct: 401 DDALALFKEMVSSGVSPNIITYNIILQG 428
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 160/371 (43%), Gaps = 24/371 (6%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G D ++ S + A+A + E M + + YN ++N + G+ K +
Sbjct: 9 GGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF 68
Query: 104 QELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q +K K PD TYN ++ S + E A K E++ I + +YS++ +K
Sbjct: 69 QSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVK 128
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
PE++ L+EM C + A++ ++ + ++ +++ M+ K ++
Sbjct: 129 EAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS 188
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESF 276
Y +I L K+G+ +++ I E ++ G VPN+ L+ +LE A
Sbjct: 189 YHILIHGLAKIGKLDESLKILSEM-AMRAAG--YVPNVITFSTLIHGLCRTGELEKALEV 245
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
+ ++ G KP T+ L G + ++ + E F+K + +P + AYN L
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKM---TQACIPPDAV---AYNSL 299
Query: 337 E----EQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKMPLI--IVERMQKDN 388
++G +D AE L + + I +N+L+ + K GK+ +V M
Sbjct: 300 IAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 359
Query: 389 VQMDAETQKVL 399
+ D T ++L
Sbjct: 360 LAADTCTYRIL 370
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 10/234 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKC-PLPYNHMLNLYISNGQLDKVPQMLQE 105
T S L+H + + +A + M E G C P Y + L + +KV Q +
Sbjct: 225 TFSTLIHGLCRTGELEKALEVFGSMLEAG---CKPNKYTYT-TLIAGLCRAEKVIQAREL 280
Query: 106 LKKNTS----PDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDWISYSTLTSLYI 160
+K T PD V YN +A + + AEK + E+ + P ++++TL +
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K+ +A + EM + + Y L++ + DE L ++K+M ++
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 400
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
+ L K G ++A +++ +P IL + I ++E A+
Sbjct: 401 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQ 454
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 2/199 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + +K +A L EKM++ + YN ++ Y G +D+ ++ +E+
Sbjct: 260 TYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 319
Query: 107 KKNTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
P +VT+N + A + E+ + D +Y L + +
Sbjct: 320 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATK 379
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A K+M ++ + V+ S + G D+ +++ A N +
Sbjct: 380 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 439
Query: 225 VISSLVKLGEFEKAENIYD 243
+ SL+KLG E A+ + +
Sbjct: 440 LSESLIKLGRVEDAQKLME 458
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 154/332 (46%), Gaps = 12/332 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
L++S + K EA L+ +M G + + Y +++ Y G+L KV Q+++E++ K
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175
Query: 110 TSPDVVTYN-LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P++ TY+ + L C S E EK E+ K + PD + Y+TL + K+ + A
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVE-GEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
EME R + +A+S+L+ + G E +++ +M+ + ++ YT +I
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
KLGE +KA ++++ I T + L +L+ A + + KG++
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354
Query: 289 YTTWELLTWGYLKKG---QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+T+ + G K G Q K++E K+A PD T + + G++ A
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEA-----GLHPDTITYTTLMDAYYKTGEMVKA 409
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
LL + + G T + +N L+ +GK+
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKL 441
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 5/287 (1%)
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
+YN+ + + A + ++ PD +SY+T+ Y + +K +KEM
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + + N YSS++ L G E ++ ++MM + YT +I KLG
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ A ++ E E+ D + L+ ++ A+ +N ++ KG +P T+ L
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RN 354
GY K G+M+K + + P+ TA + L + G++D A LL + R
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQI--GLTPNVVTYTALADGLCKSGELDTANELLHEMCRK 349
Query: 355 AGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
++ YN+++ KAG + + ++E M++ + D T L
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 135/323 (41%), Gaps = 21/323 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S+++ ++ K E E ++ +M + G + Y +++ + G ++ E+
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + PD + ++ + + A+K F E+ K +PD ++Y+ L Y K+
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA +M + N V Y++L G D + +M ++N + Y +
Sbjct: 302 KKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTI 361
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K G +A + +E + D L+ AY ++ A ++ +G+
Sbjct: 362 VNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGL 421
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI--TAAYNKLEEQGDID 343
+P T+ +L G G++E + KW+ + ++ A YN + +Q
Sbjct: 422 QPTVVTFNVLMNGLCMSGKLEDG--------ERLLKWMLEKGIMPNAATYNSIMKQ---- 469
Query: 344 GAEHLLVTLRNAGHVSTEIYNSL 366
+RN +STEIY +
Sbjct: 470 ------YCIRNNMRISTEIYRGM 486
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 163/372 (43%), Gaps = 11/372 (2%)
Query: 28 TRAREN--FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+R RE F E + PD TC+ L+ ++ EA +++ M G + + Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
N +++ G++ + ++L+ + + SPD+VT+N L A + E+ +
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM--SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
I PD I+Y+ L + ++ + A L+E+ ++ + +AY+SL+ G +E
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
++ K+M + Y+ ++S + G KA I E SI+ NI+L
Sbjct: 361 HKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGG 420
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
I + A S + LV +G P T+ L G K ++ + + + + R
Sbjct: 421 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM--ASRGCF 478
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLII 380
P+ + + L G +D A L+V + H + +Y SL+ K+ +M ++
Sbjct: 479 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMV 538
Query: 381 VERMQKDNVQMD 392
++ M+ V +D
Sbjct: 539 LDAMRGQGVALD 550
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 8/291 (2%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
DV +YN L K + +L + P+ +++ L K +A L
Sbjct: 26 DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
+ +++ + + ++ L+ G D+ +++++ M S K Y VIS L K
Sbjct: 86 RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145
Query: 233 GEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
G EKA + +E G P + N L+ A+ +++ A +F ++ GI P
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T +L G K G +E+ LE + VPD + + L G + A +L
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGM--KLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263
Query: 351 TLRNAGHVSTEIYNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKVL 399
T+ + + T +N+LL + KAG +P L ++E M ++N+ D T +L
Sbjct: 264 TMSCSPDLVT--FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 15/290 (5%)
Query: 94 GQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ + + L+ L + + +PDV +N+ + + + A K F ++ +++ P+ ++Y
Sbjct: 76 GQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTY 135
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRK--NRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+T+ S K EKA L+EM ++ + + V Y++L++ + E +KM
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195
Query: 211 MSLFAKMNDAEYTC--VISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-ILLAAYINR 267
+ A +N TC ++S + K G+ E+A I D + D N I+ A +
Sbjct: 196 KA--AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+E AE L T P T+ L G+ K G + + LE ++ +PD
Sbjct: 254 KVVEAAEI----LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM--CRENILPDVI 307
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
T N L G + A +LL + G++ I Y SL+ K+G++
Sbjct: 308 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 155/402 (38%), Gaps = 51/402 (12%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSEC 74
R QA+ RA E F L + PD + L+H ++ +A L E M
Sbjct: 70 RGNCKAGQAM--RALE-FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK---NTSPDVVTYNLWL---------- 121
+ YN +++ +G L+K ++L+E+ + ++PD+VTYN +
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 122 AACA-------------------------SQNDKETAEKAFLELKKTKIDPDWISY-STL 155
ACA D E A + +K PD I+Y S +
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+L + ++ E AA LK M +C + V +++LL + G L + ++M
Sbjct: 247 HALCVAGKVVE-AAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 302
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
+ YT +++ L ++G+ + A + +E D L+ ++E A
Sbjct: 303 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK 335
+ +G + + L GY + G + K E + + VP
Sbjct: 363 LVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSI--NMVPPLFTYNIVLGG 420
Query: 336 LEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L + G I A L+ L G+V + YN+L+ KA ++
Sbjct: 421 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 10/387 (2%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+N+ R P +C++LL++ V+N ++ A + ++M G + + M+N +
Sbjct: 179 FDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCK 238
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G++D+ +++++ P++VTY+ + S D E A+ + + + + ++
Sbjct: 239 DGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT 298
Query: 152 YSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+ L Y K ++A L+ M E+ + AY L+ Y G D+ +R+ +M
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ L K N +I+ K GE +AE + + D N LL Y
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A + ++++ +GI+P T+ L G + G + L+ + + PD +
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKX--GVAPDEVGYS 476
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKD 387
+ L + + +GA L + G + I +N+++ K GKM I ++M+
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536
Query: 388 NVQMDAETQKVLKITSEMPVSEVSSIF 414
D T + L I S V F
Sbjct: 537 GCSPDGITYRTL-IDGYCKASNVGQAF 562
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 2/262 (0%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P +L YV+ + A + + M +CG + N +LN + NG+ + Q
Sbjct: 156 PTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQ 215
Query: 105 E-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ ++ PDV ++ + A + A +++ ++P+ ++Y +L + Y+ +
Sbjct: 216 QMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLG 275
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE-Y 222
E A LK M ++ +N V Y+ L+ Y DE ++ + M A + D Y
Sbjct: 276 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 335
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + G+ + A + DE + + + N L+ Y R ++ AE R+V
Sbjct: 336 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 395
Query: 283 KGIKPCYTTWELLTWGYLKKGQ 304
+KP ++ L GY ++G
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGH 417
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ----LDKVPQML 103
C++L++ Y + + EAE ++ +M + YN +L+ Y G + +ML
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
QE P V+TYN L + A + + + K + PD + YSTL KME
Sbjct: 430 QE---GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKME 486
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
E A+T K++ R K+R+ +++++S MG E I+ KM L + Y
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I K +A + E + + N L++ +L + +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR 606
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECF 312
G+ P T+ L G+ K+G ++K +
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSY 635
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 5/267 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSE-CGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + L+ Y + K EAE ++ M E + Y +++ Y G++D ++L E
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ ++ N + + + AE + + PD SY+TL Y +
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A +M + + Y++LL +G D+ L+IW MM ++ Y+
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L K+ FE A ++ + + T N +++ ++ AE ++++ G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537
Query: 285 IKPCYTTWELLTWGYLKK---GQMEKV 308
P T+ L GY K GQ KV
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKV 564
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 139/362 (38%), Gaps = 36/362 (9%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S LL + + A L + + GF K + +N M++ G++ + ++ ++K
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
SPD +TY + ++ A K +++ I P Y++L S K +
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVE 595
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
L EM R N V Y +L+ + G D+ + +M N + ++S
Sbjct: 596 XTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 655
Query: 228 SLVKLGE----------------------FEKAENIYDEWESISGTGDPR---------- 255
L +LG F K++ Y + I+ + D
Sbjct: 656 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNI 715
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
V NI +A +++ A F++ L KG P T+ L GY G +++ +
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ R VP+ A N L + ++D A+ L L G + YN+L+ Y K G
Sbjct: 776 LR--RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 833
Query: 375 KM 376
M
Sbjct: 834 NM 835
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 131/328 (39%), Gaps = 19/328 (5%)
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAE 134
F P ++ +L +Y+ G + + K P + + N L + TA
Sbjct: 152 FAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 211
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ ++ + I PD S + + + K ++AA +K+ME N V Y SL++ Y
Sbjct: 212 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW-ESISGTGD 253
++G + + K M N YT +I K + ++AE + E + D
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 331
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
R +L+ Y +++ A + ++ G+K L GY K+G++ + +
Sbjct: 332 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEA----E 387
Query: 314 KAIGSVRKW--VPDHRLITAAYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI-YNSL 366
I + W PD + +YN L + +G A +L + G T + YN+L
Sbjct: 388 GVITRMVDWNLKPD----SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443
Query: 367 LRTYAKAGKM--PLIIVERMQKDNVQMD 392
L+ + G L I M K V D
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKXGVAPD 471
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 139/380 (36%), Gaps = 74/380 (19%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI--SN-GQLDKVPQML 103
T + ++ + K EAE + +KM + G + Y +++ Y SN GQ KV +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ ++ SP + YN ++ E+ + P+ ++Y L + K
Sbjct: 569 E--REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS----------- 212
+ +KA ++ EM + N + S+++S +G DE + +KM+
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL 686
Query: 213 ---------------------LFAKMNDAEYTCVISSLVKLGEFEKAENIY--------- 242
F N+ Y I+ L K G+ + A +
Sbjct: 687 KSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFV 746
Query: 243 -DEWE--------SISGTGDPR------------VPNI-----LLAAYINRNQLEMAESF 276
D + S +G D VPNI L+ ++ A+
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
+++L KG+ P T+ L GY K G M+ + K I P +A N L
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE--EGISPSVVTYSALINGL 864
Query: 337 EEQGDIDGAEHLLVTLRNAG 356
+ GDI+ + LL + AG
Sbjct: 865 CKHGDIERSMKLLNQMIKAG 884
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVV 115
+ K +A +S GF+ Y +++ Y + G +D+ ++ E L++ P++V
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TYN + + + A++ F +L + + P+ ++Y+TL Y K+ + A +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + V YS+L++ G + +++ +M+ EY ++ K +
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNY 905
Query: 236 EK 237
+
Sbjct: 906 NE 907
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF L K PD T L+H Y EA L ++M G + + YN ++N
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ +D+ ++ +L +K P+VVTYN + + + A K ++ + I P +
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+YS L + K E++ L +M K + Y +L+
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 158/393 (40%), Gaps = 67/393 (17%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP------------------LPYNHM 86
P ++L+HSY K A A L+ +M+ CG CP LP +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG---CPPGYVVYNIFIGSICGQEKLPSPDL 233
Query: 87 LNLY------------------ISN--------GQLDKVPQMLQE-LKKNTSPDVVTYNL 119
L+L ++N G+ DK Q+++E ++K PD TY+
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ E A F E+K + PD +Y+ L + K L E+A +EM
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C V Y++L+ Y + I+ +M+ + ND Y ++ L K G KA
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 240 NIYDEWESISGTGDPR-----------VPNI-----LLAAYINRNQLEMAESFYNRLVTK 283
+Y + S + D PN+ L+ ++++ A + +++
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G +P + ++ L G+ K G+++ E F + ++P T+ +++ + G +D
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC--GYLPSVHTYTSLIDRMFKDGRLD 531
Query: 344 GAEHLLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
A +L L+++ + Y +++ + G+
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/355 (18%), Positives = 144/355 (40%), Gaps = 32/355 (9%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H+Y++ K+ +A + +M + G + Y +++ G + K ++ +L
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 107 -----------------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +P+VVTY + + + A + + + +P+
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I Y L + K + A +M K + Y+SL+ G D +++ +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ N YT +I L ++GE EKA + E + + L+ +
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR-----KWVP 324
++++ + ++ KG P Y T+ +L G ++K + +G ++ K++
Sbjct: 600 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA----RLLLGEMKQTYWPKYLQ 655
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKMPL 378
+R ++K + +L + + G V +Y L+ ++KAG++ +
Sbjct: 656 GYRCAIQGFSK-----SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 705
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 151/337 (44%), Gaps = 7/337 (2%)
Query: 44 GPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS-NGQLDKVP 100
PD +AL+ + + + +A A+ +M + G + YN +L++Y + +V
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241
Query: 101 QMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
++ +K++ D TYN ++ C + A + F E+K +PD +++++L +Y
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K E+A LK+ME C + V Y+SL+S Y G +E L + ++M K +
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +IS L ++G+ + A Y E + + N L+ + R + ++
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
L + G P TW L + + G +V FK+ + ++P+ + +
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKA--GYIPERDTYVSLISSYSRC 479
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
G D A + + AG + YN++L A+ G+
Sbjct: 480 GLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 516
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 49/376 (13%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK+ T ++LL Y + ++ EA +++KM G + YN +++ Y+ +G L++
Sbjct: 289 PDKV----TFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEE 344
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEK---------------------- 135
++ QE++ + PDVVTY ++ + A
Sbjct: 345 ALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIK 404
Query: 136 -------------AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
F +L+ PD ++++TL +++ + L + + KEM+K
Sbjct: 405 MHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 464
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
R Y SL+S Y+ G D+ + I+K+M+ + + Y V+S+L + G + +AE ++
Sbjct: 465 ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLF 524
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP---CYTTWELLTWGY 299
E E D + LL AY N +L+ ++ + + I+P T L+
Sbjct: 525 AEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKV 584
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHV 358
+ EK + ++ R+ D ++ A + + + E +L ++ N+ +
Sbjct: 585 NSLSETEKAFQELRR-----RRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINH 639
Query: 359 STEIYNSLLRTYAKAG 374
S YNSL+ Y++ G
Sbjct: 640 SAATYNSLMHMYSRLG 655
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 124/267 (46%), Gaps = 9/267 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A+L + + + +AE L +M + L Y+ +L+ Y + +LDK+ +
Sbjct: 499 PDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKAL 558
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETA----EKAFLELKKTKIDPDWISYSTLTSL 158
+++ + +N + N+K + EKAF EL++ + D + + S+
Sbjct: 559 SEDIYAQR---IEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSI 615
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y K ++ +K L M++ + + Y+SL+ +Y+ +G ++ I ++ S + +
Sbjct: 616 YGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPD 675
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y VI + + G+ ++A ++ E + D NI + +Y+ E A
Sbjct: 676 RYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVR 735
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQM 305
LV +G KP T+ + GY + G+M
Sbjct: 736 YLVAQGCKPNERTYNSILEGYCRHGRM 762
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 127/317 (40%), Gaps = 38/317 (11%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F++L PD T + LL + QN +E + ++M + G++ Y +++ Y
Sbjct: 419 FDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 478
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G D+ ++ + + + PD+ TYN L+A A AEK F E++ PD +S
Sbjct: 479 CGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELS 538
Query: 152 YSTLTSLYIKMELPEKAAT-----------------------------------TLKEME 176
YS+L Y + +K +E+
Sbjct: 539 YSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELR 598
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
+R C + ++++S+Y +V + M + A Y ++ +LG+ E
Sbjct: 599 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCE 658
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
K E I E +S D N ++ AY + Q++ A ++ + G+KP T+ +
Sbjct: 659 KCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFI 718
Query: 297 WGYLKKGQMEKVLECFK 313
Y+ E+ ++ +
Sbjct: 719 KSYVANLMFEEAIDLVR 735
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 38/248 (15%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKM------------------ 71
E F + D+ PD + S+LLH+Y KK + +AL E +
Sbjct: 521 EKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLV 580
Query: 72 ---------SECGF-----LKCPLPYN---HMLNLYISNGQLDKVPQMLQELKKNT-SPD 113
+E F +C L N M+++Y N + KV ++L +K+N+ +
Sbjct: 581 NNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHS 640
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
TYN + + D E E E+K + + PD SY+T+ Y + ++A+
Sbjct: 641 AATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFS 700
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM+ + + V Y+ + Y +E + + + +++ K N+ Y ++ + G
Sbjct: 701 EMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHG 760
Query: 234 EFEKAENI 241
+A++
Sbjct: 761 RMVEAKSF 768
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 132/300 (44%), Gaps = 3/300 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ N K ++A L+++M E GF + Y +LN+ +GQ ++L+++
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ +N D V Y++ + + A F E++ D I+Y+TL +
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L++M KR N V +S L+ + G E ++ K+MM N Y +
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K E+A + D S D NIL+ Y N+++ + + +G+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ L G+ + G++E + F++ + R+ PD + L + G+++ A
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS--RRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 151/355 (42%), Gaps = 6/355 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
S ++ ++ A L +M GF + YN ++ + + G+ D ++L++ +K
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SP+VVT+++ + + + A++ E+ + I P+ I+Y++L + K E+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M + C + + ++ L++ Y D+ L ++++M N Y ++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ G+ E A+ ++ E S D ILL + +LE A + ++ ++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ ++ G +++ + F ++ D R ++L + + A+
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSL--PLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
L + GH E+ YN L+R + ++E M+ D T K++
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +++ + + +EA ++ E GF+ + YN +++ +I G +D + +E+
Sbjct: 536 TFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM 595
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ SP+VVTY + N + A K E+++ ++ D +YS L + K
Sbjct: 596 CEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDM 655
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A E+ + NR+ Y+S++S + ++ + L +KKM++ + YT +
Sbjct: 656 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTL 715
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L+K G A ++Y E S D ++L+ N+ QLE A + K +
Sbjct: 716 IDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNM 775
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
P + L GY ++G +++ + + R VPD
Sbjct: 776 TPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD--RGLVPD 813
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 136/355 (38%), Gaps = 35/355 (9%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVV 115
+ K EA +L++ M G + + YN M+ + G +D + + L ++ P+VV
Sbjct: 441 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 500
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY++ + + D E A F ++ I P +++T+ + K+ +A LK
Sbjct: 501 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 560
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + + Y+S++ + G D L ++++M N YT +I+ K
Sbjct: 561 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 620
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ A DE D + L+ + R +E A+ + L+ G+ P + +
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680
Query: 296 TWGYLKKGQMEKVLECFKKAIGS---------------------------------VRKW 322
G+ ME L +KK I +
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
VPD N L +G ++ A +L + R S IYN+L+ Y + G +
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 795
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 149/386 (38%), Gaps = 57/386 (14%)
Query: 42 MRGPDT---CSALLHSYVQNKKSAEAEALMEKMSECG----FLKCPLPYNHMLNLYISNG 94
MR P+T LL+ YV ++ + C F +N++LN YI
Sbjct: 105 MRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRAN 164
Query: 95 QL-------------DKVP---------------QMLQELK--------KNTSPDVVTYN 118
++ D +P M+ EL+ + D T +
Sbjct: 165 RIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVH 224
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + AC + E AE+ F E K+ + D +YS + K L+EM++R
Sbjct: 225 VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKER 284
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
+ ++S++ G E LR+ ++M++ MN T ++ G + A
Sbjct: 285 GWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 344
Query: 239 ENIYDEWESISGTGDPRVPN-----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
N++++ T D PN +L+ N +E A Y ++ GI P
Sbjct: 345 LNLFNKI-----TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN 399
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
L GYLK E+ + F +A+ + + ++ + L + G +D A LL +
Sbjct: 400 SLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSW---LCKGGKMDEACSLLDNMV 456
Query: 354 NAGHVSTEI-YNSLLRTYAKAGKMPL 378
N G V + YN ++ + + G M +
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDM 482
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 124/303 (40%), Gaps = 35/303 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++++ + V EA L E+M CG + ++ Y + G LD + ++
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+ VTY++ + C + + E A + + ++K I P + ++L Y+K L
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411
Query: 166 EKAA----------------------------------TTLKEMEKRTCRKNRVAYSSLL 191
E+A+ + L M + N V+Y+ ++
Sbjct: 412 EEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 471
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+ G D ++ M++ K N Y+ +I K G+ EKA +++D+ S++
Sbjct: 472 LGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIA 531
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
N ++ Q+ A + +G P T+ + G++K+G ++ L
Sbjct: 532 PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAV 591
Query: 312 FKK 314
+++
Sbjct: 592 YRE 594
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +++ + G+L + E L K PD++T+++ + ++ E A K E+
Sbjct: 712 YTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMD 771
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
+ + P + Y+TL + Y + ++A T EM R + V Y L++
Sbjct: 772 RKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 158/393 (40%), Gaps = 67/393 (17%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP------------------LPYNHM 86
P ++L+HSY K A A L+ +M+ CG CP LP +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG---CPPGYVVYNIFIGSICGQEKLPSPDL 233
Query: 87 LNLY------------------ISN--------GQLDKVPQMLQE-LKKNTSPDVVTYNL 119
L+L ++N G+ DK Q+++E ++K PD TY+
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ E A F E+K + PD +Y+ L + K L E+A +EM
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C V Y++L+ Y + I+ +M+ + ND Y ++ L K G KA
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 240 NIYDEWESISGTGDPR-----------VPNI-----LLAAYINRNQLEMAESFYNRLVTK 283
+Y + S + D PN+ L+ ++++ A + +++
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G +P + ++ L G+ K G+++ E F + ++P T+ +++ + G +D
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC--GYLPSVHTYTSLIDRMFKDGRLD 531
Query: 344 GAEHLLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
A +L L+++ + Y +++ + G+
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/355 (18%), Positives = 144/355 (40%), Gaps = 32/355 (9%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H+Y++ K+ +A + +M + G + Y +++ G + K ++ +L
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 107 -----------------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +P+VVTY + + + A + + + +P+
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I Y L + K + A +M K + Y+SL+ G D +++ +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ N YT +I L ++GE EKA + E + + L+ +
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR-----KWVP 324
++++ + ++ KG P Y T+ +L G ++K + +G ++ K++
Sbjct: 600 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA----RLLLGEMKQTYWPKYLQ 655
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKMPL 378
+R ++K + +L + + G V +Y L+ ++KAG++ +
Sbjct: 656 GYRCAIQGFSK-----SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 705
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 134/280 (47%), Gaps = 5/280 (1%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T + L+ S + K EA + + M+ G Y MLN Y + G L
Sbjct: 325 LPDVV----TLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380
Query: 98 KVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ + L +PD+ T+++ + A A+ + A F E++ + PD ++Y+T+
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ ++ + A +M + ++ AY L+ + G + + ++M+ +
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ ++ +I++L KLG A+NI+D ++ D V ++L+ Y ++E A
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ +V+ GI+P + L GY K G++++ L F++ +
Sbjct: 561 FDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREML 600
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 165/411 (40%), Gaps = 58/411 (14%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYIS---NGQLDKVPQMLQEL 106
LL + + K++ EA + L+ + E G + Y+ +L +GQ D + +M+ E
Sbjct: 156 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 215
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
SPDVV Y + + D A F E+ + I PD ++YS++ K
Sbjct: 216 GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMG 275
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA L++M + + Y++L+ Y++ G E +R++K+M + ++
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335
Query: 227 SSLVKLGEFEKAENIYDEWE-------------SISG-----------------TGDPRV 256
SL K G+ ++A +++D ++G GD
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395
Query: 257 PNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
P+I L+ AY N L+ A +N + G+KP T+ + + G+M+ +E
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
F + I + PD G + A+ L++ + N G + ++S++
Sbjct: 456 FNQMID--QGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNL 513
Query: 371 AKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEM 405
K G++ P +V M D + + +K L++ M
Sbjct: 514 CKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 564
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 109/295 (36%), Gaps = 38/295 (12%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F + D PD T + ++ + + K +A +M + G Y+ ++ + +
Sbjct: 421 FNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 480
Query: 93 NGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G L K +++ E+ N D+V ++ + A+ F PD +
Sbjct: 481 HGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVV 540
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS L Y + EKA M N V Y +L++ Y +G DE L ++++M+
Sbjct: 541 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREML 600
Query: 212 ----------------SLFA-------------------KMNDAEYTCVISSLVKLGEFE 236
LF +N Y V+ K F+
Sbjct: 601 QKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFD 660
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+A ++ E +++ D N ++A ++E A+ + + G+ PC T
Sbjct: 661 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 154/366 (42%), Gaps = 11/366 (3%)
Query: 34 FFENLPDKMRGPDTCS----ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FE L + P C+ ++ Y K EA L+E+ G + + YN +L
Sbjct: 77 LFEQLEQNRKVP--CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTC 134
Query: 90 YISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
++++ ++ +E+K++ P+V TYN+ + + A + ++++ + P+
Sbjct: 135 LGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 194
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++ + + K + E+A + + M+ + C N V +SSL+ G D+ +++K
Sbjct: 195 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEK 254
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ YT +I S K G E IY E + D + N + +
Sbjct: 255 MLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE 314
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
E + + + G P ++ +L G +K G + E F + V D
Sbjct: 315 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM--KEQGCVLDTHAY 372
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQK 386
A + + G ++ A LL ++ GH T + Y S++ AK ++ ++ E +
Sbjct: 373 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 432
Query: 387 DNVQMD 392
+ ++++
Sbjct: 433 NGIKLN 438
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 36/272 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
S L+H V+ + E L M E G + YN +++ + +G+++K Q+L+E+K
Sbjct: 338 SILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 397
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM----- 162
K P VVTY + A + + A F E K I + + YS+L + K+
Sbjct: 398 KGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDE 457
Query: 163 ------ELPEKAAT------------------------TLKEMEKRTCRKNRVAYSSLLS 192
EL +K T + M+ C N++ YS L++
Sbjct: 458 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILIN 517
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ ++ W++M L K N YT +IS L K G +A ++ +++ G
Sbjct: 518 GLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 577
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
D N ++ + N+ A + + KG
Sbjct: 578 DSASYNAMIEGLSSANKAMDAYALFEETRLKG 609
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS----------LYIKMELPEKAAT 170
+A C A ++K K P + +Y+ L + K ++A
Sbjct: 17 VANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVE 76
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+++E+ AY++++ Y + G DE + ++ + + + Y C+++ L
Sbjct: 77 LFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLG 136
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K E+A I++E + P VP NIL+ +L A + + G+ P
Sbjct: 137 KKRRVEEALRIFEEMKR---DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPN 193
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T ++ K ++E+ F+ V P+ ++ + L + G +D A L
Sbjct: 194 VLTVNIMIDRLCKAQKLEEACSIFEGMDDKV--CTPNAVTFSSLIDGLGKCGRVDDAYSL 251
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
+ + GHV I Y SL+R++ K G+
Sbjct: 252 YEKMLDCGHVPGAIVYTSLIRSFFKCGR 279
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 133/280 (47%), Gaps = 5/280 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK--VPQMLQEL 106
+A++ Y ++ + +A L++ M + + +N ++N +G L ++L E+
Sbjct: 65 NAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEV 124
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD +TYN ++AC+ ++ + A F E+ ++ PD +Y+ + S++ +
Sbjct: 125 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 184
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A KE+ ++ + + V Y+SLL + G + V R+ ++++ + + Y +
Sbjct: 185 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 244
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G + A +YDE +I T D +L+ + +++ A + G+
Sbjct: 245 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 304
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
KP T+ L Y K G+ + F + + S K PD
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVK--PD 342
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F+ L +K PD T ++LL+++ + E + E++ + GF K + YN M+++
Sbjct: 188 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 247
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+LD + E++ +PD VTY + + + + A K E+ + P
Sbjct: 248 YGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 307
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++S L Y K + A T M + + +R+AY +L ++ +++ +++
Sbjct: 308 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 367
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+ K +D Y ++++L K E ++ E + + E++ + +IL+ A
Sbjct: 368 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA----E 423
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD-HR 327
+ S R +G +P + + Y K G+ EK L + +R+ VP+ H
Sbjct: 424 CISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE----WIRQHVPNSHN 479
Query: 328 LIT 330
LI+
Sbjct: 480 LIS 482
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 9/270 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKM--SECGFLKCPL-PYNHMLNLYISNGQLDKV 99
PD T + L+ + Q +A A+ E+M SEC + L YN M++++ G+ +
Sbjct: 131 PDAITYNTLISACSQGSNLDDAVAVFEEMIASEC---RPDLWTYNAMVSVHGRCGKAQEA 187
Query: 100 PQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
M +EL +K PD VTYN L A A + D E E+ EL K D I+Y+T+ +
Sbjct: 188 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 247
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y KM + A EM C + V Y+ L+ M E ++ ++M K
Sbjct: 248 YGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 307
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
++ +I + K G + AE +D D ++L + ++ Y
Sbjct: 308 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 367
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
++ G KP +++L K + +++
Sbjct: 368 AMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 158/377 (41%), Gaps = 23/377 (6%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
ENF + L + G D +AL+H+Y ++ A A+ + M + G L N M+
Sbjct: 608 ENFVKGLKQE-SGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRA 666
Query: 90 YISNGQLDK---VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
I +G+LD+ V Q LQ+L S V L L A A D K + +K
Sbjct: 667 LIVDGRLDELYVVVQELQDLDIKISKSTVL--LMLEAFAKAGDVFEVMKIYNGMKAAGYL 724
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ Y + SL + + EME + + V ++LL +YT G D + +
Sbjct: 725 PNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEV 784
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN--ILLAAY 264
+ ++ + ++ Y +I + F E +E P++ + ILLAA
Sbjct: 785 YHSILEAGLEPDEDTYNTLIVMYSR--NFRPEEGFTLLYEMGKRGLTPKLESYKILLAAS 842
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY---LKKGQMEKVLECFKKAIGSVRK 321
E A+ + + TKG + + + ++ Y + E +L K+ +
Sbjct: 843 GKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKE--DGIEP 900
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII 380
+ ++ +Y G D AE +L +L+++ +ST Y+++L Y + L I
Sbjct: 901 TIATMHILMTSYGT---SGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGI 957
Query: 381 VE--RMQKDNVQMDAET 395
+ M++D V+ D +
Sbjct: 958 TKLLEMKRDGVEPDHQV 974
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 126/315 (40%), Gaps = 11/315 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L ++ + E + M G+L Y M++L N + V M+ E+
Sbjct: 694 TVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEM 753
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD+V N L + + + + + + ++PD +Y+TL +Y + P
Sbjct: 754 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 813
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ T L EM KR +Y LL+ ++ ++++M + ++N + Y +
Sbjct: 814 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 873
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ KAE++ + +IL+ +Y + AE N L + +
Sbjct: 874 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNL 933
Query: 286 KPCYTTWELLTWGYLKKGQ----MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ + + YL+ + K+LE + + PDH++ T+
Sbjct: 934 EISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVE------PDHQVWTSFIRAASLCEQ 987
Query: 342 IDGAEHLLVTLRNAG 356
D A LL +L++ G
Sbjct: 988 TDDAILLLKSLQDCG 1002
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 148/338 (43%), Gaps = 21/338 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T SAL+ +Y ++ + +AE ++M E G L Y ML+++ + + K+ + + +
Sbjct: 310 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 369
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMEL 164
K+ PD Y + LAA A N+ + E +++ +++P IS S+ IK E
Sbjct: 370 IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVIS-----SILIKAEC 424
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ A+ LK + + + S+L Y MG ++ L + + + ++ C
Sbjct: 425 ISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISEC 484
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL--LAAYINRNQL--EMAESFYNRL 280
I L K G+ A Y + + + ++ L Y+ +L E + F + +
Sbjct: 485 SIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCD-M 543
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRL-ITAAYNKLE- 337
GI P ++ + + + G E + A S + + R+ + AY KL+
Sbjct: 544 QFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKL 603
Query: 338 -EQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+Q AE+ + L+ V I+N+L+ YA++G
Sbjct: 604 WQQ-----AENFVKGLKQESGVDRRIWNALIHAYAESG 636
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 109/292 (37%), Gaps = 75/292 (25%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL--PEKAA 169
P V +N + A + A + ++ I+PD +S++TL + K A
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L E+ + R + + Y++L+S + D+ + ++++M++ + + Y ++S
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G+ ++A E + LV KG +P
Sbjct: 179 GRCGKAQEA-----------------------------------ELMFKELVEKGFQPDA 203
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ L + + K+G +E+V ++ L+ A + K DG
Sbjct: 204 VTYNSLLYAFAKEGDVERVERVCEE-------------LVKAGFRK-------DGI---- 239
Query: 350 VTLRNAGHVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
YN+++ Y K G++ L + + M+ DA T VL
Sbjct: 240 ------------TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVL 279
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 171/400 (42%), Gaps = 54/400 (13%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T + L+ +Y + + EA KM + G + +N M+N+ ++GQL++V ++
Sbjct: 272 GSHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLV 331
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+++++ SP+ TYN+ ++ A +D A K F +K+ ++PD +SY TL Y
Sbjct: 332 RKMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKEACLEPDLVSYRTLLYAYSIR 391
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++ +A +KEM++R ++ S+L +Y G D+ L +W + M Y
Sbjct: 392 KMVGEAEELVKEMDERRLEIDQYTQSALTRMYIKAGMLDQSL-LWFLRFHVAGNMTSECY 450
Query: 223 TCVISSLVKLGE----------------------------------FEKAENIYDEWESI 248
I + + G +EKA ++D E
Sbjct: 451 AASIDAYGEHGHTLEAEKVFIWSQKQKNLSVLEFNVMIKAYGIGKCYEKACQLFDSMEQH 510
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D L+ +Q MA+ + ++ G+ + ++ + K GQ+E
Sbjct: 511 GVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQEAGLVSDCIPYCVVICSFAKLGQLEMA 570
Query: 309 LECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSL 366
+ + + I R V PD + + N + G + A + ++ AG +T IYNSL
Sbjct: 571 EDIYWEMI---RHGVQPDVIVYSILINVFSDAGRVKEAISYVDEMKKAGLPGNTVIYNSL 627
Query: 367 LRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMP 406
++ YAK DN++ E K+L+++ E P
Sbjct: 628 IKLYAKI-------------DNLEKAQEAYKLLQLSEEGP 654
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 153/383 (39%), Gaps = 49/383 (12%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE + + PD S LL++Y K EAE L+++M E + + +YI
Sbjct: 365 YFEIMKEACLEPDLVSYRTLLYAYSIRKMVGEAEELVKEMDERRLEIDQYTQSALTRMYI 424
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVT--YNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G LD+ +L L+ + + ++ + Y + A AEK F+ +K K +
Sbjct: 425 KAGMLDQ--SLLWFLRFHVAGNMTSECYAASIDAYGEHGHTLEAEKVFIWSQKQK-NLSV 481
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ ++ + Y + EKA ME+ +R +Y+SL+ + T KK
Sbjct: 482 LEFNVMIKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYLKK 541
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINR 267
M + Y VI S KLG+ E AE+IY WE I P V +IL+ + +
Sbjct: 542 MQEAGLVSDCIPYCVVICSFAKLGQLEMAEDIY--WEMIRHGVQPDVIVYSILINVFSDA 599
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK-------------- 313
+++ A S+ + + G+ + L Y K +EK E +K
Sbjct: 600 GRVKEAISYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQEAYKLLQLSEEGPNVYSS 659
Query: 314 ----------KAIGSVRKWVPDHR-----------LITAAYNKLEEQGDIDGAEHLLVTL 352
+G ++ + ++ Y K+E D A + +
Sbjct: 660 NCMIDLYVKQSMVGQAKQIFDTLKKNGGANEFTFAMMLCLYKKIER---FDEAIQIAKQI 716
Query: 353 RNAGHVSTEIYNSLLRTYAKAGK 375
R G ++ YN++L YA AG+
Sbjct: 717 RKLGPLTELSYNNVLDLYAIAGR 739
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 17/152 (11%)
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM R Y +L+ +Y+ G +D+ L M+ + ++ V+ K G
Sbjct: 176 EMNARGIAATCSTYGTLIDVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAG 235
Query: 234 EFEKAENIYDEWESISGTG------DPRVP-----------NILLAAYINRNQLEMAESF 276
EF+KAE + +W + D RV N L+ Y QL+ A
Sbjct: 236 EFQKAEEFFKKWSLGNDNAMATLELDERVVCANASFGSHTYNTLIDTYGKAGQLKEASET 295
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
+ +++ +G+ P T+ + GQ+E+V
Sbjct: 296 FAKMLKQGVAPTTVTFNTMINICGNHGQLEEV 327
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPY--NHMLNLYISNGQLDKVPQMLQELKKN 109
L++ + N + A+ + ++SE G P Y N M++LY+ + + Q+ LKKN
Sbjct: 630 LYAKIDNLEKAQEAYKLLQLSEEG----PNVYSSNCMIDLYVKQSMVGQAKQIFDTLKKN 685
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP-DWISYSTLTSLYIKMELPEKA 168
+ T+ + L C + + E + + K+ P +SY+ + LY P++A
Sbjct: 686 GGANEFTFAMML--CLYKKIERFDEAIQIAKQIRKLGPLTELSYNNVLDLYAIAGRPKEA 743
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
T KEM + + + N + SL +L G
Sbjct: 744 IETFKEMVRASIQVNDCSLRSLGNLLLRYG 773
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 8/342 (2%)
Query: 41 KMRG----PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-Q 95
KM+G T A+++ + + K + L+ +MSE G YN++++ +G +
Sbjct: 234 KMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCR 293
Query: 96 LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++ + +K PD+ TYN+ + S + AE+ + K + P+ +SY+ L
Sbjct: 294 IEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPL 353
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
Y K +A L +M +R + + V Y++L+ G D L + KM+
Sbjct: 354 IHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGV 413
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
+ Y ++S L K G A+ + E + D + L+ +I E A+
Sbjct: 414 LPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKK 473
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK 335
+ + KGI P + + GY K G M+ L CFK+ I + PD + +
Sbjct: 474 LFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHS--PDEFTYSTIIDG 531
Query: 336 LEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ D+ GA + + ++ A + Y L+ + +G +
Sbjct: 532 YIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDI 573
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 3/257 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +AL+H + + A + KM E G L YN +++ G+L +
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E L +N +PD + D E A+K F + IDP + Y+ + Y K
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCK 499
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A K M + + YS+++ Y M LR++ M+ K N
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT +I+ G+ +AE + + S+ + IL+ + L A SF+ +++
Sbjct: 560 YTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQML 619
Query: 282 TKGIKPCYTTWELLTWG 298
+ P T+ L G
Sbjct: 620 MEKCLPNDVTYNYLMNG 636
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 142/342 (41%), Gaps = 6/342 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++ + K + L+EK G + + YN +++ Y G ++ + +EL
Sbjct: 174 TVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKEL 233
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K P V TY + + E +K +E+ + +D Y+ + K
Sbjct: 234 KMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCR 293
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+AA T+ M K C + Y+ L++ + G + ++ ++ + N YT +
Sbjct: 294 IEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPL 353
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + K GE+ +A ++ + D L+ I ++++A + N++V KG+
Sbjct: 354 IHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGV 413
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + +L G KKG++ + + + PD + + GD + A
Sbjct: 414 LPDANIYNVLMSGLCKKGRLPAAKVLLAEMLD--QNVAPDAFITATLVDGFIRHGDFEEA 471
Query: 346 EHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERM 384
+ L +T+ YN++++ Y K G M L+ +RM
Sbjct: 472 KKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRM 513
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC--VIS 227
+ LK M+ + R A+S ++S++ + G D L ++ + + + D ++C +++
Sbjct: 87 SLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDV-FSCNSLLN 145
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
LVK G+ E A +YDE +G D I++ ++E + +G P
Sbjct: 146 VLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMP 205
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ L GY KKG E+ FK+ ++ ++P + A N ++G + +
Sbjct: 206 NIVFYNTLIDGYCKKGDTERANVLFKEL--KMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
LLV + G VS IYN+++ K G
Sbjct: 264 LLVEMSERGLDVSIHIYNNIIDAQFKHG 291
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 109/280 (38%), Gaps = 40/280 (14%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LP+K+ + + L+H+Y + + A L+ KMSE G + Y +++ I G++D
Sbjct: 344 LPNKV----SYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVD 399
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ ++ +K PD YN+ ++ + A+ E+ + PD +TL
Sbjct: 400 VALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLV 459
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+I+ E+A + ++ V Y++++ Y G + L +K+M+
Sbjct: 460 DGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHS 519
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ Y+ +I YI N L A
Sbjct: 520 PDEFTYSTIID-----------------------------------GYIKMNDLHGALRM 544
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ +V KP T+ LL G+ G + + + FK+ +
Sbjct: 545 FGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML 584
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+ +++ YI L +M + K P+VVTY L + D AEK F ++
Sbjct: 525 YSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML 584
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
++ P+ ++Y+ L + K KA + ++M C N V Y+ L++ TN
Sbjct: 585 SLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTN 639
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 113/288 (39%), Gaps = 31/288 (10%)
Query: 40 DKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
D+ PD + L+ ++++ EA+ L E E G + YN M+ Y G +
Sbjct: 445 DQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMK 504
Query: 98 KV----PQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
+M+Q L SPD TY+ + ND A + F + K P+ ++Y+
Sbjct: 505 DALLCFKRMIQGLH---SPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYT 561
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
L + + +A T K+M + N V Y+ L+ + + +++M+
Sbjct: 562 LLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLME 621
Query: 214 FAKMNDAEYTCVISSLVKLGEF-------EKAEN----------IYDEWESISGTGDPRV 256
ND Y +++ L +F E+ EN I D W+ + +
Sbjct: 622 KCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAAS----- 676
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
N +L ++ A +++++KG P + L G +G+
Sbjct: 677 YNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGR 724
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 17/292 (5%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL 67
G V+A YR + + L T + N L+H+ K EA+ +
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNL----------------LIHALFLEGKMDEADGM 398
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACAS 126
++ M + G + + YN ++N Y G K + E + K P +VTY + +
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSK 458
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+N + A+ F ++ + PD I ++ L + ++A LKEM+KR + V
Sbjct: 459 RNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVT 518
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y++L+ G +E + K+M + + Y +IS K G+ A I DE
Sbjct: 519 YNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML 578
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
SI N L+ Q ++AE +V+KGI P +T+ L G
Sbjct: 579 SIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 57/340 (16%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N M+N+ G+L K + ++ P+VVTYN + S+ E A +K
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMK 298
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN----- 196
++PD +Y +L S K E+A+ L++M++ V Y++L+ Y N
Sbjct: 299 NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLV 358
Query: 197 --MGYKDEVLR-----------IWKKMMSLFAKMNDAE-----------------YTCVI 226
GY+DE++R + + L KM++A+ Y +I
Sbjct: 359 KAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILI 418
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI--NRNQLEMAESFYNRLVTKG 284
+ + G +KA N++DE IS P + Y+ RN+++ A+ + +++ +G
Sbjct: 419 NGYCRCGNAKKAFNLHDEM--ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE----QG 340
P + L G+ G +++ K+ R VPD YN L + +G
Sbjct: 477 ASPDLIMFNALIDGHCANGNLDRAFALLKEM--DKRNIVPDE----VTYNTLMQGRCREG 530
Query: 341 DIDGAEHLLVTLRNAG----HVSTEIYNSLLRTYAKAGKM 376
++ A LL ++ G H+S YN+L+ Y+K G +
Sbjct: 531 KVEEARELLKEMKRRGIRPDHIS---YNTLISGYSKRGDI 567
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 41 KMRG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
K RG PD T +L+ + K EA ++EKM E G L + YN +++ Y + G L
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357
Query: 97 DKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
K E+ ++ P V TYNL + A + + A+ ++ + I PD I+Y+ L
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+ Y + +KA EM + + V Y+SL+ + + +++K++ A
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
+ + +I G ++A + E + + D N L+ ++E A
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ +GI+P + ++ L GY K+G +
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDI 567
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L++ + + A+ L EK+ G + +N +++ + +NG LD+ +L+E+
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N PD VTYN + + E A + E+K+ I PD ISY+TL S Y K
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A T EM + Y++L+ D + K+M+S +D+ Y +
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627
Query: 226 ISSLVKLGEFEKAEN 240
I + K+ + +A +
Sbjct: 628 IEGIGKVDDSSEASD 642
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 101 QMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
M++E K P + T+N L+ N ET + E+ + KI +++ + ++
Sbjct: 190 DMMKE--KGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLC 247
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K +KA + ME + N V Y++++ Y + G + + M + + +
Sbjct: 248 KEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSY 307
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +IS + K G+ E+A I ++ + I N L+ Y N+ L A + + +
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM 367
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEK 307
V + I P +T+ LL +G+M++
Sbjct: 368 VRRAILPTVSTYNLLIHALFLEGKMDE 394
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 108/265 (40%), Gaps = 11/265 (4%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+ +++ + AC + A + F +K+ + P +++ + SL++K+ E E
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + + ++ ++++ G + M +L K N Y VI G
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
E A + D ++ D L++ +LE A ++ G+ P T+
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 295 LTWGYLKKGQMEKVL----ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
L GY KG + K E ++AI V + L+ A L +G +D A+ ++
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAI---LPTVSTYNLLIHA---LFLEGKMDEADGMIK 400
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAG 374
+ ++G V I YN L+ Y + G
Sbjct: 401 DMGDSGIVPDSITYNILINGYCRCG 425
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 5/323 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++++ ++ K + + ++ E G + YN +++ Y S G +++ +++ +
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAM 286
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K SP V TYN + E A++ F E+ ++ + PD +Y +L K
Sbjct: 287 PSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDA 346
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ +M R + V +SS++SL+T G D+ L + + ++ YT +
Sbjct: 347 VETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 406
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + G +A N+ +E D N +L R L A+ +N + +G+
Sbjct: 407 IQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL 466
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P T +L G+ K G ++ +E FKK ++ V + + + K+ GDID
Sbjct: 467 FPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV---GDIDT 523
Query: 345 AEHLLVTLRNAGHVSTEIYNSLL 367
A+ + + + + T I S+L
Sbjct: 524 AKEIWADMVSKEILPTPISFSIL 546
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 143/325 (44%), Gaps = 10/325 (3%)
Query: 8 GAQVRAQSYRQRVAQA----QALQTRARENFFENLPDKMRGPD-TC-SALLHSYVQNKKS 61
G + +YR + +A A++T EN F ++ + PD C S+++ + ++
Sbjct: 325 GLSPDSTTYRSLLMEACKKGDAVET---ENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 381
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLW 120
+A + E G + + Y ++ Y G + + + E L++ + DVVTYN
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L + A+K F E+ + + PD + + L + K+ + A K+M+++
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI 501
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ + V Y++LL + +G D IW M+S ++ ++++L G +A
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFR 561
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
++DE S S + N ++ Y E F +++++G P ++ L +G++
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPD 325
K+ M K KK VPD
Sbjct: 622 KEENMSKAFGLVKKMEEKQGGLVPD 646
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 123/285 (43%), Gaps = 5/285 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +LH + K EA+ L +M+E G +++ + G L ++ +++
Sbjct: 437 TYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM 496
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K DVVTYN L D +TA++ + ++ +I P IS+S L +
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM ++ + + +S++ Y G + +KM+S + Y +
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTK 283
I VK KA + + E G P V N +L + NQ++ AE+ +++ +
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
G+ P +T+ L G++ + + + + + R + PD +
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ--RGFSPDDKF 719
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 140/361 (38%), Gaps = 35/361 (9%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN- 109
L+ ++VQ +K EA + G+ N ++ + G ++ ++ QE+ ++
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+V T N+ + A E E+++ + PD ++Y+TL S Y L E+A
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ M + Y+++++ G + ++ +M+ + Y ++
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G+ + ENI+ + S D + +++ + L+ A ++N + G+ P
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400
Query: 290 TTWELLTWGYLKKGQMEKVLE------------------------CFKKAIGSV------ 319
+ +L GY +KG + + + C +K +G
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460
Query: 320 ---RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
R PD +T + + G++ A L ++ + YN+LL + K G
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 376 M 376
+
Sbjct: 521 I 521
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 139/365 (38%), Gaps = 39/365 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ Y +N A L +++ GFL Y M+N + G+ + V ++L E+K+
Sbjct: 241 NTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKE 300
Query: 109 ------------------------------------NTSPDVVTYNLWLAACASQNDKET 132
PD+ TYN + S+
Sbjct: 301 RGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVRE 360
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
AE+ + + P+ SY+ L + K +A+ L EM +R + +AY +L+
Sbjct: 361 AEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVH 420
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
G D L + KMM + Y ++S L K G F A+ + E + T
Sbjct: 421 GLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTP 480
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D V L+ +I L+ A+ + + +GI + GY K G M L CF
Sbjct: 481 DAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCF 540
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYA 371
K+ V PD + + +Q D+ GA + + L+ + + SL+ +
Sbjct: 541 KRMFNGVHS--PDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFC 598
Query: 372 KAGKM 376
+ G +
Sbjct: 599 RNGDL 603
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 141/329 (42%), Gaps = 6/329 (1%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYN 118
K E L+EK G + + YN +++ Y NG +++ + +ELK K P V TY
Sbjct: 217 KVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYG 276
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ A + E +K +E+K+ + ++ + K +AA ++ M +
Sbjct: 277 AMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIES 336
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C + Y++L++ + G E + + + N YT +I + K GE+ +A
Sbjct: 337 GCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRA 396
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E T D L+ + ++++A + ++++ +GI P + +L G
Sbjct: 397 SELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSG 456
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGH 357
KKG+ + + + + PD + + G++D A+ L +T+
Sbjct: 457 LCKKGRFPAAKQLLVEMLD--QNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGID 514
Query: 358 VSTEIYNSLLRTYAKAGKM--PLIIVERM 384
S N++++ Y K G M L+ +RM
Sbjct: 515 TSVVECNAMIKGYCKYGMMNDALLCFKRM 543
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 1/251 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
AL+H V + A + +KM E G L YN +++ G+ Q+L E L
Sbjct: 416 GALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLD 475
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+N +PD + + + A+K F + ID + + + Y K +
Sbjct: 476 QNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMND 535
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A K M + YS+++ Y LR++ M+ K N +T +I+
Sbjct: 536 ALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLIN 595
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ G+ +AE +++E S + IL+ + +L A F+ +++ P
Sbjct: 596 GFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIP 655
Query: 288 CYTTWELLTWG 298
T+ L G
Sbjct: 656 NDATFNYLVNG 666
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 6/230 (2%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D S+L L + + ++ L+ M+ + A S ++S Y G E L ++
Sbjct: 95 DGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELY 154
Query: 208 KKMMSLFAKMNDAEYTC--VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
++ + + D + C +++ LV G+ E A +YDE +G D I+
Sbjct: 155 NTVIDVHNCVPDV-FACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLC 213
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
++E + KG P + L GY K G +E+ FK+ V+ ++P
Sbjct: 214 KEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKEL--KVKGFLPT 271
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
+ A N ++G + + LLV ++ G VS +I+N ++ K G
Sbjct: 272 VKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHG 321
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 43 RGPDT----CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
RG DT C+A++ Y + +A ++M Y+ +++ Y+ L
Sbjct: 511 RGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRG 570
Query: 99 VPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+M LKK P+VVT+ + D AEK F E++ +P+ ++Y+ L
Sbjct: 571 ALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIG 630
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ K KA ++M C N ++ L++ TN
Sbjct: 631 YFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTN 669
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 14/271 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ ++++ EA+ L + E G + N M+ Y G ++ + +
Sbjct: 486 ATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFN 545
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAF-LELKKTKIDPDWISYSTLTSLYIKMELPE 166
SPD TY+ + QND A + F L LKKT P+ +++++L + + +
Sbjct: 546 GVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKT-CKPNVVTFTSLINGFCRNGDLN 604
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A +EM N V Y+ L+ + G + +++M+ NDA + ++
Sbjct: 605 RAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLV 664
Query: 227 SSL-------VKLGEFEKAENIYDEWES--ISGTGDPRVP--NILLAAYINRNQLEMAES 275
+ L + N+ E+ IS D R+ N +L ++ A
Sbjct: 665 NGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQ 724
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
++++++KG P ++ L G +G+++
Sbjct: 725 LHDKMMSKGFPPDPVSFIALLHGLCLEGRLQ 755
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 188/405 (46%), Gaps = 40/405 (9%)
Query: 26 LQTRARENFFENLPDKMRG-----PDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
L R R N ++ D+M G PDT + L+ + +N E ++MS
Sbjct: 142 LLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEP 201
Query: 79 CPLPYNHMLNLYISNGQL----DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAE 134
+ YN +++ G++ + V M++++K + SPDVVTY + + + + A
Sbjct: 202 DVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMK-DLSPDVVTYTTLVRGYCMKQEIDEAL 260
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK-EMEKRTCRKNRVAYSSLLSL 193
F E+ + P+ I+Y+TL +++ +K L + R + Y++L++
Sbjct: 261 VVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNA 320
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW--ESISGT 251
+ G DE L+++KKM L + + A Y+ +I +L + G+FE+AE ++D+ E I
Sbjct: 321 QCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLR 380
Query: 252 GDPRVPNILLAAY-------INRNQLEMAESFYNRLVTKGIK--PCYTTWELLTWGYLKK 302
D P L+AAY + AE + +L+ KG + P Y T L G+ K+
Sbjct: 381 DDGCTP--LVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKT---LIIGHCKE 435
Query: 303 GQMEKVLECFKKAIGSVRK-WVPDHRLITAAYNKLEEQGD-IDGAEHLLVTLRNAGHVST 360
G E +K + +R+ +VPD N ++G+ I + L L+++ T
Sbjct: 436 GTFE---AGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKT 492
Query: 361 EIYNSLLRTYAK------AGKMPLIIVERMQKDNVQMDAETQKVL 399
+++S+L K + +++++R + N+ + T ++L
Sbjct: 493 SVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLL 537
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 161/383 (42%), Gaps = 25/383 (6%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E + DK PD T +A++H Y + E+ + KM+ G + + ++ ++
Sbjct: 287 EFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSS 346
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+G+ ++ Q + K PD+V+Y++ L A++ F + I +
Sbjct: 347 LCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSN 406
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+ L S + K + ++A EM+ + R N V YS+L+S + MG + + +
Sbjct: 407 CHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFS 466
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M+S+ + N A Y +I G+ KA+ E S G R PNI+ + I +
Sbjct: 467 QMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMS---KGLHR-PNIVFFSSIIHS 522
Query: 269 -----QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKW 322
++ A+ +N ++ G +P T+ L GY G+MEK + +
Sbjct: 523 LCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH----VSTEIYNSLLRTYAKAGKMPL 378
V + + + Y K G ID L+ R H +T YN +L +AG+
Sbjct: 583 VVTNNTLVSGYCK---SGKIDDG---LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSA 636
Query: 379 I--IVERMQKDNVQMDAETQKVL 399
+ M +D +T K+L
Sbjct: 637 AKKMFHEMIDSGTAVDIDTYKIL 659
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 146/333 (43%), Gaps = 7/333 (2%)
Query: 49 SALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
+ L K++ EA + L+ +MSE + + YN ++ + + + M+Q +
Sbjct: 163 TTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMA 222
Query: 108 K---NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
K SPDVV++N + Q + A F E+ + + PD +Y+++ K
Sbjct: 223 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARA 282
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+KA L++M + + V Y++++ Y+ G+ E ++++KM S + ++
Sbjct: 283 MDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSS 342
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+SSL K G + AE I+ + D +ILL Y + + ++ + KG
Sbjct: 343 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKG 402
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDID 343
I +L + K+G M++ + F + G VR V + + +A+ ++ D
Sbjct: 403 IVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLA--D 460
Query: 344 GAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
E + +T +Y+SL+ + G +
Sbjct: 461 AMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDL 493
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 94/231 (40%), Gaps = 2/231 (0%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P +VT+N + E A + I+PD ++ +TL S Y K +
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+EM + + V Y+ +L G +++ +M+ ++ Y ++ L +
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
++A ++ + ++ D + N ++ A + E A + + T G+ P +T
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+ ++ LK+G +E+ F S P RL+ L ++GDI
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKS--GCAPSSRLLNDIIRMLLQKGDI 774
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 6/270 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QEL 106
++LL+S + KK +A A+ M SE F+ + Y+ +++ + +L + ++ Q +
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
N P+V TYN +L + A+ + E+ PD I+YSTL + +
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + M R CR N V Y+ LL DE +++KM+ + YT ++
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKG 284
+G+ E+A ++DE +S DP V N LL + + A+ + +V++
Sbjct: 630 YGFCNVGKIEQAVEVFDEM--VSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KP + ++ G K +++ +E F++
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFER 717
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 124/274 (45%), Gaps = 4/274 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L+ + + + AE L ++M + + YN LN + G++ +
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+ SPDV+TY+ + + + A + F + P+ ++Y+ L K
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
P++A ++M +R C +RV Y++LL + N+G ++ + ++ +M+S +
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 659
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL- 280
Y C++ + G+ +A+ ++ S D NI++ +L+ A + R+
Sbjct: 660 YNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 719
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
G P T+ L +G + ++ + ++ FK+
Sbjct: 720 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKE 753
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 12/251 (4%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSEC 74
+ R+A AQ + +E + PD T S L+H + +K +A L E M
Sbjct: 530 KGRIADAQGV--------YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETA 133
G + YN +L+ + D+ ++ +++ ++ PD VTY L + E A
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
+ F E+ DPD ++Y+ L + + P +A + M R C+ + V+++ ++
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMND-AEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ D+ + ++++M D Y +I L +A ++ E + + +
Sbjct: 702 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761
Query: 253 DPRVPNILLAA 263
DP N+LL A
Sbjct: 762 DPHAFNVLLEA 772
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 129/289 (44%), Gaps = 11/289 (3%)
Query: 94 GQLDKVPQMLQE-LKKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D +L+ +K+ PD+ T+++ + C + +E E FL+ KI S
Sbjct: 388 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE--FLQGMDRKISSRSSS 445
Query: 152 ---YSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
Y++L + K + +A M +R+ + V+YS L+ + + +++
Sbjct: 446 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLY 505
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
K+M+ L N Y ++ L++ G A+ +Y+E + + D + L+ +
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+ + A + ++++G +P T+ L G K+ + ++ E F+K + R PD
Sbjct: 566 RKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE--RGCDPDRV 623
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
T G I+ A + + + GH + YN LL+ + +AGK
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 672
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/364 (17%), Positives = 142/364 (39%), Gaps = 47/364 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH--MLNLYISNGQLDKVPQMLQ 104
TC +++ + + A +L+E M + G+ CP H ++N ++ + + LQ
Sbjct: 376 TCHSVIQELCKAGRVDSALSLLETMIKRGY--CPDMATHSMLINELCKADKIQEAQEFLQ 433
Query: 105 ELKKNTS---------------------------------------PDVVTYNLWLAACA 125
+ + S PDVV+Y++ +
Sbjct: 434 GMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFC 493
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
++ AEK + ++ P+ +Y+ + ++ A +EM C + +
Sbjct: 494 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
YS+L+ ++ D+ +++ M+S + N Y C++ L K + ++A ++ +
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 613
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
D LL + N ++E A ++ +V+KG P + L G+ + G+
Sbjct: 614 VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 673
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--Y 363
+ + F+ + R+ PD + L + +D A + + S ++ Y
Sbjct: 674 GEAKQLFQVMVS--RQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 731
Query: 364 NSLL 367
NSL+
Sbjct: 732 NSLI 735
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 43/335 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QE 105
T + L+ S + S EA +M + GF Y + + G+ + ++ ++
Sbjct: 166 TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD 225
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+K + +++ L Q+ A K F + K+ PD YS + + K+E
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+ M + + A +N+ +T
Sbjct: 286 DEA----------------------FKLFLEMAVESK------------APLNNVAWTAF 311
Query: 226 ISSLVKLGEFEKA-ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+S L K G+ E+A E ES+S + P V ++L+ I +++ AE + +
Sbjct: 312 LSGLCKSGKIEQAFEACRTMQESLS-SSQP-VYDMLIRLLIESGRIDKAEEACLEIAGRN 369
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I+P T + K G+++ L + I R + PD + N+L + I
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIK--RGYCPDMATHSMLINELCKADKIQE 427
Query: 345 AEHLLVTLRN---AGHVSTEIYNSLLRTYAKAGKM 376
A+ L + + S YNSLL + KA K+
Sbjct: 428 AQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 145/339 (42%), Gaps = 16/339 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + ++H Y + + +A KM E F N +L + G LD ++
Sbjct: 266 TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 325
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME-L 164
+ K + D VTYN ++ + E A E+++ K+ PD +Y+ + E
Sbjct: 326 ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQ 385
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +M +++ + + + LL G D L+++ +S ++ Y
Sbjct: 386 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNT 445
Query: 225 VISSLVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+IS L K G FE+A ++ E E +G D N ++ Y Q+E A F N++V K
Sbjct: 446 IISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEK 505
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA-YNK----LEE 338
KP T +L G ++G + K L+ F W+ + I A YN L +
Sbjct: 506 SFKPDLFTCNILLRGLCREGMLVKALKLF-------NTWISKGKAIDAVTYNTIISGLCK 558
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+G + A LL ++ YN++L A AG+M
Sbjct: 559 EGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 23/278 (8%)
Query: 112 PDVVTYN-----LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD +YN LWL C S ++ +K EL ++ + P I+Y+T+ Y + E
Sbjct: 225 PDNASYNTILDVLWL--CRSGKTDQSIDK-LNELLESGLVPHQITYNTIIHGYCREGQVE 281
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA +M +++ + + + LL G D L+++ +S ++ Y +I
Sbjct: 282 KAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTII 341
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN-RNQLEMAESFYNRLVTKGI 285
S L K G FE+A ++ E E D N +L A + Q+E A F N++V K
Sbjct: 342 SGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSF 401
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA-YNK----LEEQG 340
KP T +L G +G ++ L+ F W+ + I A YN L ++G
Sbjct: 402 KPDLFTCNILLRGLCTEGMLDNALKLF-------NTWISKGKAIDAVTYNTIISGLCKEG 454
Query: 341 DIDGAEHLLVTL--RNAGHVSTEIYNSLLRTYAKAGKM 376
+ A LL + +N YN+++ Y + G++
Sbjct: 455 RFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQV 492
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 9/280 (3%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENF--FENLPDKMRGPD--TCSALLHSYVQNKKSAE 63
G + A +Y + + R E F + +K GPD T +A+L + + E
Sbjct: 329 GKAIDAVTYNT-IISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVE 387
Query: 64 -AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWL 121
A KM E F N +L + G LD ++ + K + D VTYN +
Sbjct: 388 KAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTII 447
Query: 122 AACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ + E A E++ K + PD +Y+T+ Y + EKA +M +++
Sbjct: 448 SGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSF 507
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ + + LL G + L+++ +S ++ Y +IS L K G FE+A +
Sbjct: 508 KPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 567
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+ E + D N +L A + ++E AE F +++
Sbjct: 568 LLAEMKEKKLGPDCYTYNAILCALADAGRME-AEEFMSKI 606
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 83 YNHML-NLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN +L L + GQ++K Q ++ +K+ PD+ T N+ L ++ + A K F
Sbjct: 372 YNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 431
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME-KRTCRKNRVAYSSLLSLYTNMGY 199
D ++Y+T+ S K E+A L EME K ++ Y++++ Y G
Sbjct: 432 ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQ 491
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
++ + KM+ K + ++ L + G KA +++ W S D N
Sbjct: 492 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNT 551
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKP-CYTTWELLTWGYLKKGQME 306
+++ + E A + K + P CY T+ + G+ME
Sbjct: 552 IISGLCKEGRFEEAFDLLAEMKEKKLGPDCY-TYNAILCALADAGRME 598
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 145/332 (43%), Gaps = 4/332 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T S L+ + + K+ EA+ ++E+M G + Y +++ ++ G + ++ +E
Sbjct: 308 TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM 367
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + ++ TYN + D E A+ E+ I PD +Y+ + Y+K +
Sbjct: 368 LARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNT 427
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ L EM+K +++ G ++ R+++ M+SL K N YT +
Sbjct: 428 SRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTL 487
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I V+ G F++A I + D N ++ ++E A+ + ++ +G+
Sbjct: 488 IKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL 547
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP T+ L GY K G+M+ FK+ +G P+ + TA + ++G A
Sbjct: 548 KPNVYTYGALIHGYCKSGEMQVADRYFKEMLGC--GIAPNDVVCTALIDGYCKEGSTTEA 605
Query: 346 EHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ L + H Y++L+ + GK+
Sbjct: 606 TSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 154/389 (39%), Gaps = 36/389 (9%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC +++ ++ +A + E M G + Y ++ ++ G+ + ++L+ +
Sbjct: 448 TCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM 507
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK PDV+ YN + E A+ +E+ + + P+ +Y L Y K
Sbjct: 508 DKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEM 567
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A KEM N V ++L+ Y G E I++ M+ + Y+ +
Sbjct: 568 QVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSAL 627
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L++ G+ + A + E+ D N +++ + + + A + + KGI
Sbjct: 628 IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI 687
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---------------------------- 317
P T+ L G K G++E+ E F G
Sbjct: 688 SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR 747
Query: 318 -----SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAK 372
+++ PD + +A + ++G+ + A L + G ST N+L+ + K
Sbjct: 748 LFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCK 807
Query: 373 AGKMPLI--IVERMQKDNVQMDAETQKVL 399
+GK+ ++E M +V+ D T +L
Sbjct: 808 SGKVIEANQLLEDMVDKHVKPDHVTYTIL 836
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 149/355 (41%), Gaps = 12/355 (3%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G C+ LL ++ K M E L Y H++N + G + ++L
Sbjct: 200 GLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLL 259
Query: 104 QELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
E++ K SP +VTYN+ + + + A + + K + D +YS L + K
Sbjct: 260 FEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQ 319
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ +A L+EM + + VAY++L+ + G E R+ ++M++ K+N Y
Sbjct: 320 KRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTY 379
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
++ + K G+ EKA+ + +E + D + N ++ Y+ + + +
Sbjct: 380 NALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKK 439
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+ P T ++ G + G +E F+ + K P+ + T ++G
Sbjct: 440 SNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVK--PNAVIYTTLIKGHVQEGRF 497
Query: 343 DGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKMP------LIIVERMQKDNV 389
A +L + G V ++ YNS++ K+ KM + ++ER K NV
Sbjct: 498 QEAVRILKVMDKKG-VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 116/268 (43%), Gaps = 4/268 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
C+AL+ Y + + EA ++ M Y+ +++ + NG+L ++L E
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+K PDV TYN ++ Q A + + + I P+ I+Y+ L + K
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A + + N V Y++++ Y G + R++ +M + Y+ +
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767
Query: 226 ISSLVKLGEFEKAENIYDEWESIS-GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I K G EKA +++ ES+ G N L+ + ++ A +V K
Sbjct: 768 IDGCRKEGNTEKALSLF--LESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKH 825
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECF 312
+KP + T+ +L + K G +++ + F
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFF 853
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 130/338 (38%), Gaps = 37/338 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL++ + + A L + + G + Y +++ Y +G L K ++ E+
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLE-------------------------- 139
K PD Y+ + C + + E A FLE
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812
Query: 140 --------LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+ + PD ++Y+ L + K ++A +M+KR N + Y++LL
Sbjct: 813 EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
S Y G + E+ ++ +M++ + + ++ +I + +K G+ K + D+ G
Sbjct: 873 SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGN 932
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
V ++L+ + + ++ +G+ T L + K G+M+
Sbjct: 933 VSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARV 992
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
K + KWVPD + N ++ D + A L
Sbjct: 993 LKSMV--RFKWVPDSTELNDLINVEQDSTDSENAGDFL 1028
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 149/366 (40%), Gaps = 19/366 (5%)
Query: 45 PDT-C-SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD C ++++ +++K EA+ + +M E G Y +++ Y +G++ +
Sbjct: 514 PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573
Query: 103 LQE-LKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+E L +P DVV L C + E A F + + PD +YS L +
Sbjct: 574 FKEMLGCGIAPNDVVCTALIDGYCKEGSTTE-ATSIFRCMLGRSVHPDVRTYSALIHGLL 632
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ + A L E ++ + Y+S++S + G + ++ + M N
Sbjct: 633 RNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNII 692
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFY 277
Y +I+ L K GE E+A ++D I G G + ++ Y L A +
Sbjct: 693 TYNALINGLCKAGEIERARELFD---GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF 749
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
+ + KG+ P + L G K+G EK L F + SV+K + A +
Sbjct: 750 DEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF---LESVQKGFASTSSLNALMDGFC 806
Query: 338 EQGDIDGAEHLLVTLRNAGHVSTE--IYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDA 393
+ G + A LL + + HV + Y L+ + K G K MQK N+ +A
Sbjct: 807 KSGKVIEANQLLEDMVDK-HVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865
Query: 394 ETQKVL 399
T L
Sbjct: 866 LTYTAL 871
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 91/214 (42%), Gaps = 1/214 (0%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
+A F E++ + +AL+ + ++ K EA L+E M + + Y +++
Sbjct: 779 KALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILID 838
Query: 89 LYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
+ G L + Q ++ K+N P+ +TY L+ + F E+ I+P
Sbjct: 839 YHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEP 898
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +++S + ++K K + +M K+ ++ L+ + EVL++
Sbjct: 899 DGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVL 958
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+K+ ++ A + ++ K G+ + A +
Sbjct: 959 EKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARV 992
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 156/349 (44%), Gaps = 12/349 (3%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
A LH + + SA A AL + C +N ML + G+ + ++L+++ +
Sbjct: 86 ASLHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR- 144
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMELPEKA 168
P+ VTYN +A ++ + A + E++ + I PD +Y+TL S + K+ E A
Sbjct: 145 --PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDA 202
Query: 169 ATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
EM K + V Y++L+ Y ++G D L+ + M+ M A Y ++
Sbjct: 203 VKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L A + +E + + D NIL+ Y + A + + KG++
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAE 346
T+ L + + +KGQ+++ F A V+K + PD + A N GD++ A
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVA---VKKGIRPDVVMYNALINSHCTGGDMERAY 379
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
++ + ++ YN+L+R + G++ +++ M K +Q D
Sbjct: 380 EIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPD 428
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 7/236 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
R + A A+ ++N F PD T + L++ Y + +A + E+MS+ G
Sbjct: 269 RASDAYAVLEEMQKNGFS--PDVF----TYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ Y ++ ++ GQ+ + ++ +KK PDVV YN + + + D E A +
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++K +I PD ++Y+TL + + ++A T + EM KR + + V+Y++L+S Y+
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMK 442
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G + LR+ +MM Y +I L K+ + + AEN+ E + T D
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPD 498
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ Y G+LD Q +++ ++ + V TYNL + A A E++
Sbjct: 222 YNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ 281
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K PD +Y+ L + Y K +KA +EM ++ R V Y+SL+ +++ G
Sbjct: 282 KNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQ 341
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E R++ + + + Y +I+S G+ E+A I E E D N L+
Sbjct: 342 ETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLM 401
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ +L+ A + + + +GI+P ++ L GY KG ++ L
Sbjct: 402 RGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDAL 449
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L++ + + + E + L + G + YN ++N + + G +++ +++ E+
Sbjct: 326 TYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEM 385
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK PD +TYN + + A E+ K I PD +SY+TL S Y
Sbjct: 386 EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDI 445
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + + Y++L+ + D+ + K+M++ +D+ Y +
Sbjct: 446 KDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISL 505
Query: 226 ISSL 229
I L
Sbjct: 506 IEGL 509
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 131/296 (44%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+++++ + +G +D+ ++++E++++ + Y+ + D++ F LK
Sbjct: 377 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 436
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P ISY L +LYIK+ KA KEME + N YS L+S + ++
Sbjct: 437 ECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFA 496
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
I+++M+ + + A Y +I + K+G ++A I ++ + R ++
Sbjct: 497 NAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPII 556
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ ++ A + + + G P T+ L G +KK Q+E+ + K S+
Sbjct: 557 EGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKM--SIAG 614
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
P+ T GDI A ++ G + IY +LLR K+G+M
Sbjct: 615 ITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRM 670
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 98/240 (40%), Gaps = 1/240 (0%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 125
+++ M G + YN +++ I Q+++ +L ++ +P+ TY + + A
Sbjct: 571 ILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYA 630
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ D A + F ++K+ + D Y TL K + A +EM + +N
Sbjct: 631 ANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTF 690
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y+ L+ + G E + K+M N YT I++ K G+ ++A+ + +E
Sbjct: 691 VYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEM 750
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + + L+ + + + A + + G+KP + L L + +
Sbjct: 751 ADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATV 810
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 2/237 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H ++ + A +++ KMS G Y ++ Y +NG + K + ++
Sbjct: 586 TYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKI 645
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ DV Y L AC ++A E+ KI + Y+ L + +
Sbjct: 646 KEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDV 705
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+AA +K+M++ N Y+S ++ G ++ ++M + K N YT +
Sbjct: 706 WEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTL 765
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
I K ++A ++E + D + L+ + ++R + M S Y +++
Sbjct: 766 IKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATV-MEGSTYTGILS 821
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 112/283 (39%), Gaps = 7/283 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + L + A + DK A F ++ I+P+ +++L Y +
Sbjct: 267 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSC 326
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
++EM+ V YS +++ + + ++K+ + +N Y+ +I + +
Sbjct: 327 VEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQ 386
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G ++AE + E E + ++ Y + + RL P +
Sbjct: 387 SGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 446
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ L Y+K G++ K + K+ ++ + ++ + + L D A +
Sbjct: 447 YGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLH---DFANAFSIFE 503
Query: 351 TLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
+ +G IYN L+ + K G M + I+E+MQK+ +Q
Sbjct: 504 EMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQ 546
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +++ + + +EA ++ E GF+ + YN +++ +I G +D + +E+
Sbjct: 576 TFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM 635
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ SP+VVTY + N + A K E+++ ++ D +YS L + K
Sbjct: 636 CEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDM 695
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A E+ + NR+ Y+S++S + ++ + L +KKM++ + YT +
Sbjct: 696 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTL 755
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L+K G A ++Y E S D ++L+ N+ QLE A + K +
Sbjct: 756 IDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNM 815
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
P + L GY ++G +++ + + R VPD
Sbjct: 816 TPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD--RGLVPD 853
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 136/355 (38%), Gaps = 35/355 (9%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVV 115
+ K EA +L++ M G + + YN M+ + G +D + + L ++ P+VV
Sbjct: 481 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 540
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY++ + + D E A F ++ I P +++T+ + K+ +A LK
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 600
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + + Y+S++ + G D L ++++M N YT +I+ K
Sbjct: 601 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 660
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ A DE D + L+ + R +E A+ + L+ G+ P + +
Sbjct: 661 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 720
Query: 296 TWGYLKKGQMEKVLECFKKAIGS---------------------------------VRKW 322
G+ ME L +KK I +
Sbjct: 721 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
VPD N L +G ++ A +L + R S IYN+L+ Y + G +
Sbjct: 781 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 835
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 149/386 (38%), Gaps = 57/386 (14%)
Query: 42 MRGPDT---CSALLHSYVQNKKSAEAEALMEKMSECG----FLKCPLPYNHMLNLYISNG 94
MR P+T LL+ YV ++ + C F +N++LN YI
Sbjct: 145 MRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRAN 204
Query: 95 QL-------------DKVP---------------QMLQELK--------KNTSPDVVTYN 118
++ D +P M+ EL+ + D T +
Sbjct: 205 RIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVH 264
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + AC + E AE+ F E K+ + D +YS + K L+EM++R
Sbjct: 265 VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKER 324
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
+ ++S++ G E LR+ ++M++ MN T ++ G + A
Sbjct: 325 GWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 384
Query: 239 ENIYDEWESISGTGDPRVPN-----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
N++++ T D PN +L+ N +E A Y ++ GI P
Sbjct: 385 LNLFNKI-----TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN 439
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
L GYLK E+ + F +A+ + + ++ + L + G +D A LL +
Sbjct: 440 SLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSW---LCKGGKMDEACSLLDNMV 496
Query: 354 NAGHVSTEI-YNSLLRTYAKAGKMPL 378
N G V + YN ++ + + G M +
Sbjct: 497 NQGMVPNVVSYNDMILGHCRKGNMDM 522
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 124/303 (40%), Gaps = 35/303 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++++ + V EA L E+M CG + ++ Y + G LD + ++
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+ VTY++ + C + + E A + + ++K I P + ++L Y+K L
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451
Query: 166 EKAA----------------------------------TTLKEMEKRTCRKNRVAYSSLL 191
E+A+ + L M + N V+Y+ ++
Sbjct: 452 EEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 511
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+ G D ++ M++ K N Y+ +I K G+ EKA +++D+ S++
Sbjct: 512 LGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIA 571
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
N ++ Q+ A + +G P T+ + G++K+G ++ L
Sbjct: 572 PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAV 631
Query: 312 FKK 314
+++
Sbjct: 632 YRE 634
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +++ + G+L + E L K PD++T+++ + ++ E A K E+
Sbjct: 752 YTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMD 811
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
+ + P + Y+TL + Y + ++A T EM R + V Y L++
Sbjct: 812 RKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 54/398 (13%)
Query: 49 SALLHSYVQNKKSAEAEALME-----------------------------------KMSE 73
+AL+ ++ + KK EA L+E KM E
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 74 CGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWL-AACASQNDKE 131
GF + +N +++ + G +D ++L + K P+VVTY+ + C SQ E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A++ E+K + + PD +YS L K + E+A L+ M C + V YSS++
Sbjct: 181 -AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+ G E + ++M + Y VI L KLG+ +A+ I D+ + SG
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE-SGD 298
Query: 252 GDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK-- 307
P V + ++ + L A+ +R+ G P T+ + G K G++E+
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358
Query: 308 -VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNS 365
+L+ K+A P+ T + L + +D AE ++ +RNAG + YN+
Sbjct: 359 YLLQGMKRA-----GCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413
Query: 366 LLRTYAKAGKMPLI--IVERMQKDNVQM--DAETQKVL 399
++ +G++ +V+RM+ + DA T + +
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 451
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 139/311 (44%), Gaps = 10/311 (3%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACAS 126
L+E+M GF + ++ + G LD L+ + P+VVTY +AA A
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM--GCDPNVVTYTALIAAFAR 69
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E A K E+++ P+ ++Y+ L K+ + A +K+M + N +
Sbjct: 70 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 129
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
++SL+ + G D+ ++ M++ + N Y+ +I L K +F +A+ + +E +
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 189
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ T D + L+ +++E AE R+ G P + + + K G
Sbjct: 190 ASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG--- 246
Query: 307 KVLECFKKAIGSVRKW--VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-- 362
K+LE +K + +RK PD + L + G I A+ +L ++ +G V ++
Sbjct: 247 KLLE-AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVT 305
Query: 363 YNSLLRTYAKA 373
Y++++ K+
Sbjct: 306 YSTVINGLCKS 316
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 9/220 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T SAL+H + K EAE ++ +M+ G + Y+ +++ + +G+L + +
Sbjct: 195 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 254
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYI 160
LQE++K SPDVVTYN + A+ +++++ + PD ++YST+ +
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLC 314
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K ++ +A L M K C + V Y++++ G +E + + M N
Sbjct: 315 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 374
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
YT +IS L K + ++AE + +E + G P PN++
Sbjct: 375 TYTTLISGLCKARKVDEAERVMEEMRN---AGCP--PNLV 409
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 125/303 (41%), Gaps = 2/303 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
SAL+ +++K EA+ ++E+M G Y+ +++ ++++ QML+ +
Sbjct: 166 SALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 225
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+PDVV Y+ + A A+K E++K + PD ++Y+T+ K+ +
Sbjct: 226 SGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAE 285
Query: 168 AATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A L +M E + V YS++++ E ++ +M + YT +I
Sbjct: 286 AQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 345
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K G E+AE + + + L++ +++ AE + G
Sbjct: 346 DGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 405
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ + G G++++ + ++ + PD N L + AE
Sbjct: 406 PNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAE 465
Query: 347 HLL 349
LL
Sbjct: 466 QLL 468
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 100/209 (47%), Gaps = 6/209 (2%)
Query: 43 RGPD--TCSALLHSYVQNKKSAEAEALMEKMSECG-FLKCPLPYNHMLNLYISNGQLDKV 99
+ PD T + ++ + K AEA+ ++++M E G L + Y+ ++N + L +
Sbjct: 263 KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 322
Query: 100 PQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
++L + K +PDVVTY + E AE +K+ P+ ++Y+TL S
Sbjct: 323 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 382
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM- 217
K ++A ++EM C N V Y+++++ G E ++ ++M A+
Sbjct: 383 LCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 442
Query: 218 -NDAEYTCVISSLVKLGEFEKAENIYDEW 245
+ A Y ++++L+ ++AE + ++
Sbjct: 443 PDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 163/373 (43%), Gaps = 17/373 (4%)
Query: 34 FFENLPDKM--RGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE +P R + +AL++SY ++ + + L+E+M + L YN ++N
Sbjct: 164 IFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCA 223
Query: 92 SNG-QLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G + + + E++ + PD++TYN L ACA++ + AE F + + + PD
Sbjct: 224 RGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDI 283
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y L + K+ EK + LKEME + +Y+ LL Y + G + ++++
Sbjct: 284 TTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQ 343
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M N Y+ +++ G ++ ++ E + + D N+L+ +
Sbjct: 344 MQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGY 403
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK----VLECFKKAIGSVRKWVPD 325
+ + ++ +V + ++P T+E L + K G E +L +K I VP
Sbjct: 404 FKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGI------VPS 457
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAG--KMPLIIVE 382
+ T + + A + T+ G T E YNSL+ +A+ G K I+
Sbjct: 458 TKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMW 517
Query: 383 RMQKDNVQMDAET 395
+M + V D ++
Sbjct: 518 KMGESGVARDRDS 530
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 45/293 (15%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
NLPD + + LL +Y A + +M E + + Y+ +LNLY +G+
Sbjct: 314 NLPD----ISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRY 369
Query: 97 DKVPQMLQELK------------------------------------KNTSPDVVTYNLW 120
D V ++ E+K +N P++ TY
Sbjct: 370 DDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGL 429
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ AC E A+K L + + I P +Y+ + Y + E+A M +
Sbjct: 430 IYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGS 489
Query: 181 RKNRVAYSSLLSLYTNMG-YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
+ Y+SL++++ G YK+ +WK S A+ D+ + VI + G+FE+A
Sbjct: 490 KPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDS-FNGVIEGYRQGGQFEEAI 548
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP---CY 289
Y E E D R +L+ Y ++ +E + + GI P CY
Sbjct: 549 KTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCY 601
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 146/351 (41%), Gaps = 12/351 (3%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + + PD T L+ ++ + K + L+++M G L YN +L
Sbjct: 268 EMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEA 327
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y S G + + +++++ P+ VTY++ L + + FLE+K + +PD
Sbjct: 328 YASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPD 387
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ L ++ + ++ T +M + N Y L+ G ++ +I
Sbjct: 388 VGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILL 447
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M + YT VI + + +E+A +++ + N L+ +
Sbjct: 448 HMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGG 507
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF---KKAIGSVRKWVPD 325
+ +E+ ++ G+ ++ + GY + GQ E+ ++ + +KA ++ PD
Sbjct: 508 LYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKA-----RFQPD 562
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
R A + G +D +E +R +G + S Y ++ YA++ +
Sbjct: 563 ERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNR 613
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ Y+ + SL + L EK+ +EM ++ +Y++L++ Y G + L +
Sbjct: 140 PNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLEL 199
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLG-EFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
++M + Y VI+S + G +E +++ E D N LL A
Sbjct: 200 LERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACA 259
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
NR + AE + + G+ P TT+ L + K ++EKV E K+ S +PD
Sbjct: 260 NRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGN--LPD 317
Query: 326 HRLITAAYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI- 379
++YN L E +GDI A + ++ A V + Y+ LL Y G+ +
Sbjct: 318 ----ISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVR 373
Query: 380 -IVERMQKDNVQMDAETQKVL 399
+ M+ N + D T VL
Sbjct: 374 ELFLEMKVSNTEPDVGTYNVL 394
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/248 (18%), Positives = 100/248 (40%), Gaps = 16/248 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+ ++ +Y Q EA + M+E G YN ++N++ G + ++ ++ +
Sbjct: 462 TGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGE 521
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ D ++N + E A K ++EL+K + PD ++ + S+Y L ++
Sbjct: 522 SGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDE 581
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS--------LFAKMND 219
+ +E+ + + Y ++++Y D+ + +M++ + KM
Sbjct: 582 SEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMK 641
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
+Y ++ E ++D+ S R N LL A Q E A +
Sbjct: 642 GDYD-------DYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSE 694
Query: 280 LVTKGIKP 287
+ +G+ P
Sbjct: 695 AIKRGLFP 702
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/298 (17%), Positives = 118/298 (39%), Gaps = 18/298 (6%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+ Y + ++ + E + + F E+ + SY+ L + Y + E +
Sbjct: 140 PNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLEL 199
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM-------NDAEYTC 224
L+ M+K + + Y+++++ G W+ ++SLFA+M + Y
Sbjct: 200 LERMKKEKVTPSILTYNTVINSCARGGLN------WEGLLSLFAEMRHEGIQPDIITYNT 253
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++++ G ++AE ++ D L+ + N+LE + + G
Sbjct: 254 LLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSG 313
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P +++ +L Y KG + + F++ + VP+ + N G D
Sbjct: 314 NLPDISSYNVLLEAYASKGDIRHAMGVFRQM--QEARCVPNAVTYSMLLNLYGGHGRYDD 371
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
L + ++ + YN L+ + + G K + + M ++NV+ + T + L
Sbjct: 372 VRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGL 429
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 136/327 (41%), Gaps = 3/327 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
++ Y ++ +A L+E++ E G + + +N +L ++D+ + +KK+
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA 381
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
P++ TYN+ + A K E++ + P+ +S + + K E+A
Sbjct: 382 KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ +R C N V Y SL+ G D+ R+++KM+ N YT +I +
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
G E IY E G D + N + ++E + + + + G P
Sbjct: 502 MHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVR 561
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
++ +L G K GQ + F+ S + + D R A + L + G +D A +L
Sbjct: 562 SYSILIHGLTKAGQARETSNIFQAM--SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLE 619
Query: 351 TLR-NAGHVSTEIYNSLLRTYAKAGKM 376
++ H + Y S++ AK ++
Sbjct: 620 EMKVKHVHPTVATYGSIVDGLAKIDRL 646
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 169/417 (40%), Gaps = 47/417 (11%)
Query: 41 KMRGPDTC-SALLHSYVQNKKSAEAEALMEKMSECGF-LKCPLPYNHMLNLYISNGQLDK 98
K R P + + L+ + + ++ A L+ +M + G+ + PL + ++ GQ++
Sbjct: 171 KFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPL-FTTLVRALAREGQMEP 229
Query: 99 VPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT- 156
++ E+K + PD+V YN+ + + A K F ELK + PD +SY+++
Sbjct: 230 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVW 289
Query: 157 ------------SLYIKME----LP------------------EKAATTLKEMEKRTCRK 182
L+ +ME +P + A L+ + +R C
Sbjct: 290 VLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIP 349
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ V+++S+L+ DE L ++ +M AK N + Y +I L G +A I
Sbjct: 350 SVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIR 408
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
DE E + NI++ NQLE A + +G P T+ L G KK
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG-DIDGAEHLLVTLRNAGHVSTE 361
G+++ F+K + + P + T+ G DG + +R G
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANP--IIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLT 526
Query: 362 IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
+ N+ + KAG++ I E M+ D + +L +T E S+IF
Sbjct: 527 LLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIF 583
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 42/304 (13%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE++ PD + S L+H + ++ E + + MS+ GF YN +++
Sbjct: 547 IFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLC 606
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G++DK ++L+E+K K+ P V TY + A + + A F E K I+ + I
Sbjct: 607 KSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVI 666
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRT------------------------------- 179
YS+L + K+ ++A L+EM K+
Sbjct: 667 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSM 726
Query: 180 ----CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
C N YS L++ + ++ W++M N YT +IS L K+G
Sbjct: 727 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNI 786
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG----IKPCYTT 291
A ++++ +++ G D N L+ N N+ A + +G +K C +
Sbjct: 787 TDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISL 846
Query: 292 WELL 295
+ L
Sbjct: 847 LDAL 850
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 130/299 (43%), Gaps = 5/299 (1%)
Query: 18 QRVAQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECG 75
R+ +A L+ R FE+ ++ P++ + +L+ + K +A L EKM + G
Sbjct: 428 DRLCKANQLEEAHR--IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG 485
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAE 134
P+ Y ++ + +G+ + ++ +E +++ PD+ N ++ + E
Sbjct: 486 HDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGR 545
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
F ++K PD SYS L K + + + M ++ + AY++++
Sbjct: 546 AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G D+ + ++M A Y ++ L K+ ++A +++E +S +
Sbjct: 606 CKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 665
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ + L+ + +++ A ++ KG+ P TW L +K ++++ L CF+
Sbjct: 666 ILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQ 724
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 126/301 (41%), Gaps = 11/301 (3%)
Query: 43 RGPDTCSALLHSYVQNK-KSAEAE---ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
RG LL++Y+ K+ E E A+ E M GFL Y+ +++ GQ +
Sbjct: 519 RGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARE 578
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ Q + ++ + D YN + + A + E+K + P +Y ++
Sbjct: 579 TSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVD 638
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K++ ++A +E + + N + YSSL+ + +G DE I ++MM
Sbjct: 639 GLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 698
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
N + ++ +LVK E ++A + + + + + +IL+ + A F+
Sbjct: 699 NVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFW 758
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
+ +G+ P T+ + G K G + F++ +PD +A++N L
Sbjct: 759 QEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERF--KTNGGIPD----SASFNALI 812
Query: 338 E 338
E
Sbjct: 813 E 813
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 102/241 (42%), Gaps = 11/241 (4%)
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L + ++ E A + M R AY+ L+ + L + ++M
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ +++ +T ++ +L + G+ E A + DE + D + N+ + + ++M
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDM 264
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP---DHRLI 329
A F++ L G++P ++ + W K G++ + E F + + VP + +
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM--EAERDVPCAYAYNTM 322
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQK 386
Y E D A LL LR G + + + +NS+L K K+ L + + M+K
Sbjct: 323 IMGYGSAER---FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK 379
Query: 387 D 387
D
Sbjct: 380 D 380
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 155/359 (43%), Gaps = 11/359 (3%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
+ A+A Q + F+ + K PD T ++L++ Y + +A L + G
Sbjct: 347 KTGNAEAAQVK-----FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGL 401
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 135
L YN +++ Y G L+ ++ +E+ +++ PDV TY + + +
Sbjct: 402 GPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRI 461
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F E+ ++PD +Y+T S + + A +EM R + V Y+ L+
Sbjct: 462 FFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLC 521
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G + +W KM++ +++ YTC+I + + G +A+NI+D + +
Sbjct: 522 KTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVV 581
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
I + Y R L +A ++ +++ +G++P T+ +L + G+ E + F +
Sbjct: 582 TYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEM 641
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
+ R VP+ T + ++G+ A L + G H +N+L + + +
Sbjct: 642 LE--RGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEG 698
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSE--CGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
T + LL S+ + + +A AL++ M G L + YN ++N G+L+K Q++
Sbjct: 231 TYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD 290
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ + TYN + +++ E A LE++ I P ++Y+TL K
Sbjct: 291 IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGN 350
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E A EM + + + Y+SL++ Y G + L ++ + Y
Sbjct: 351 AEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNI 410
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I +LG+ E A + +E D IL+ L M F++ +++KG
Sbjct: 411 LIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKG 470
Query: 285 IKP-CY 289
++P C+
Sbjct: 471 LEPDCF 476
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 133/321 (41%), Gaps = 6/321 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ ++ ++K +L E++ + P VVTYN + + E A+ F E++
Sbjct: 303 YNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMR 362
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD I+Y++L + Y K ++A ++++ + Y+ L+ Y +G +
Sbjct: 363 AKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLE 422
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
R+ ++M + YT +++ + +DE S D N +
Sbjct: 423 GARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRI 482
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+A + + A ++ +GI T+ +L G K G ++ + K + +
Sbjct: 483 SAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLR 542
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII 380
D T + E+G + A+++ + +G S Y + TY + G + L
Sbjct: 543 L--DCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAY 600
Query: 381 --VERMQKDNVQMDAETQKVL 399
+M ++ V+ + T VL
Sbjct: 601 GWFRKMLEEGVEPNEVTYNVL 621
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT--CRKNRVAYSSLLSLYTN 196
++ + ++P +Y+TL + K ++A LK+ME R C N V Y+ +++
Sbjct: 219 DMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLAR 278
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G ++ ++ +M L K + Y +I+ L+ EKA + E E+
Sbjct: 279 KGELEKAAQL-VDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVT 337
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF---K 313
N L+ E A+ ++ + KG+ P T+ L GY K G +++ L F K
Sbjct: 338 YNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLK 397
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
+A + V + ++ Y +L GD++GA L
Sbjct: 398 RA--GLGPTVLTYNILIDGYCRL---GDLEGARRL 427
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 156/367 (42%), Gaps = 46/367 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ +Y ++ + EA ++M E G + + +N M+++Y +NGQL +V +++ +
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K + +PD TYN+ ++ ND E A F E+K + PD +SY TL + + E
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR---IWKKMMSLFAKMNDAEYT 223
+A + EM+ + S+L +Y + E+L W K + M+ Y+
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYV----EAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
I + + G +AE ++ + ++ N+++ AY E A + +++
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVNKRTVIEY-NVMIKAYGISKSCEKACELFESMMSY 534
Query: 284 GIKPCYTTWELLTW-----------------------------------GYLKKGQMEKV 308
G+ P T+ L ++K GQ+
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLL 367
E +K+ + PD + N + G++ A + ++ AG ++ IYNSL+
Sbjct: 595 EEVYKEMVE--YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 368 RTYAKAG 374
+ Y K G
Sbjct: 653 KLYTKVG 659
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 135/285 (47%), Gaps = 13/285 (4%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAE----AEALMEKMSECGFLKCPLPYNHMLNL 89
FE++ PD C+ ++ VQ SA+ +EKM E G++ +PY +++
Sbjct: 527 LFESMMSYGVTPDKCT--YNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISS 584
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ GQL+ ++ +E+ + N PDVV Y + + A A + + A +K+ I +
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGN 644
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV--AYSS--LLSLYTNMGYKDEVL 204
+ Y++L LY K+ ++A +++ ++C K + Y+S +++LY+ +
Sbjct: 645 SVIYNSLIKLYTKVGYLDEAEAIYRKL-LQSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
I+ M + N+ + ++ K G FE+A I + + DP N +L +
Sbjct: 704 AIFDSMKQR-GEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLF 762
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ + A + +V+ GI+P +T++ L +K G +K +
Sbjct: 763 ALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAV 807
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 115/298 (38%), Gaps = 42/298 (14%)
Query: 83 YNHMLNLYISNGQLDKVPQML---QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
Y+ ++ Y G L + ++ QE+ K T V+ YN+ + A E A + F
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRT---VIEYNVMIKAYGISKSCEKACELFES 530
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + PD +Y+TL + ++P K L++M + + + Y +++S
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS------- 583
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
S VKLG+ AE +Y E + D V +
Sbjct: 584 ----------------------------SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L+ A+ + ++ A S+ + GI + L Y K G +++ ++K + S
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 320 RK-WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
K PD N E+ + AE + +++ G + + +L Y K G+
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRF 733
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 12/235 (5%)
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM ++ + Y +L+ +Y+ G K L KM + + ++ V+ K
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 234 EFEKAENIYDEWESISGTGDPRVP------NILLAAYINRNQLEMAESFYNRLVTKGIKP 287
EF+KAE + +W D V N ++ Y Q++ A + R++ +GI P
Sbjct: 272 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + Y GQ+ +V K PD R + + DI+ A
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTM---KLHCAPDTRTYNILISLHTKNNDIERAGA 388
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
+++ G + Y +LL ++ + ++ M DNV++D TQ L
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSAL 443
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPY--NHMLNLYISNGQLDKVPQMLQE 105
++L+ Y + EAEA+ K+ C + P Y N M+NLY + K +
Sbjct: 649 NSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDS 708
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K+ + T+ + L E A + ++++ KI D +SY+++ L+
Sbjct: 709 MKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRF 768
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A T KEM + + + SL ++ +G + +R +++ K +
Sbjct: 769 KEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWIST 828
Query: 226 ISSLVKLGE 234
+SSLV +G+
Sbjct: 829 LSSLVGIGD 837
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 157/366 (42%), Gaps = 11/366 (3%)
Query: 34 FFENLPDKMRGP----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+L D+ R P +C+ LL + + + A+ ++ G +N +
Sbjct: 114 LLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQA 173
Query: 90 YISNGQLDKVPQMLQELKKNTSP--DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
++ G L + ML+ + ++ +P + +YN+ +A A + F E+ + + P
Sbjct: 174 CVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLP 233
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+ I+Y+T+ +IK E +M + N + Y+ LLS G E +
Sbjct: 234 NHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 293
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+M S + Y+ + L + G+ + +++ ++ T +ILL
Sbjct: 294 DEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKD 353
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
++ +AE LV G+ P + L GY + G++E F + R PDH
Sbjct: 354 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM--KSRHIKPDHI 411
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERM 384
A N L + I A+ LL+ +++ G + + E +N+L+ Y + G++ I++ M
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471
Query: 385 QKDNVQ 390
Q++ ++
Sbjct: 472 QENGLK 477
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 143/355 (40%), Gaps = 51/355 (14%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G TCS LL+ ++ K + AE +++ + G + + YN ++N Y G+L
Sbjct: 339 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL------- 391
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E A F ++K I PD I+Y+ L + K E
Sbjct: 392 ---------------------------EGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 424
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
A L EM+ +++L+ Y G ++ + +M K N Y
Sbjct: 425 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 484
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
++++ K G+ +A I D+ + +V N ++ AY+ + A ++ +
Sbjct: 485 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 544
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA--YNKLEE--- 338
GI P T+ LL G + Q+ + E + +HRLI A YN L
Sbjct: 545 GISPSIVTYNLLIKGLCNQSQISEAEEIINS--------LSNHRLIPDAVSYNTLISACC 596
Query: 339 -QGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKMPLI--IVERMQKDNV 389
+G+ID A L + G ST Y+ L+ AG++ + + ++M ++NV
Sbjct: 597 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 651
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++++++ +N K EA A+++ M L YN +++ Y+ +G D+ +++++K
Sbjct: 484 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 543
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N SP +VTYNL + +Q+ AE+ L ++ PD +SY+TL S +K
Sbjct: 544 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 603
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M K + Y L+S G +E+ +++KMM ++A + ++
Sbjct: 604 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 663
Query: 228 SLVKLGEFEKAENIYDE 244
+ K G KAE++ E
Sbjct: 664 AYSKYGNEIKAEDLRKE 680
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 1/220 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T + L+ +Y + + + ++ +M E G + Y ++N + NG++ + +L +
Sbjct: 446 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 505
Query: 106 L-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ K+ P+ YN + A + A ++K I P ++Y+ L
Sbjct: 506 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 565
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A + + + V+Y++L+S G D+ L + ++M K Y
Sbjct: 566 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 625
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+IS L G + E +Y + + + NI++ AY
Sbjct: 626 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 140/313 (44%), Gaps = 21/313 (6%)
Query: 44 GPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
P+ S AL+ +Y + + AEA+ +M G Y +L ++ + + +
Sbjct: 172 APNVVSQTALMEAYGKGGRYNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNKFKEAEE 231
Query: 102 MLQEL----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ +L K PD +N+ + E A + F + + I ++Y++L S
Sbjct: 232 VFDKLLNDEKSPLRPDQKMFNMMIYMYKKSGSHEKARQTFALMAERGIKKATVTYNSLMS 291
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ + + +M++ R + V+Y+ L++ Y ++E L ++++M+ +
Sbjct: 292 FETNYK---EVSNIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 348
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEM 272
Y ++ + G E+A ++ S D +P++ +L+AY+N +E
Sbjct: 349 TRKAYNILLDAFSISGMVEQARIVFK-----SMRRDKYMPDLCSYTTMLSAYVNAPDMEG 403
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
AE F+ RL+ G +P T+ L GY K +EKV+E +++ +G R + ++T
Sbjct: 404 AEKFFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLG--RGIKANQTILTTI 461
Query: 333 YNKLEEQGDIDGA 345
+ + GD D A
Sbjct: 462 MDAHGKNGDFDSA 474
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 111/269 (41%), Gaps = 7/269 (2%)
Query: 24 QALQTRARENFFENLPDKMRGP-----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
Q + + E F+ L + + P + +++ Y ++ +A M+E G K
Sbjct: 222 QGNKFKEAEEVFDKLLNDEKSPLRPDQKMFNMMIYMYKKSGSHEKARQTFALMAERGIKK 281
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+ YN +++ + ++ + +Q + + PDVV+Y L + A +E A F
Sbjct: 282 ATVTYNSLMSFETNYKEVSNIYDQMQ--RADLRPDVVSYALLINAYGKARREEEALAVFE 339
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ + P +Y+ L + + E+A K M + + +Y+++LS Y N
Sbjct: 340 EMLDAGVRPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAP 399
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+ + +K+++ + N Y +I K + EK Y+E + +
Sbjct: 400 DMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRGIKANQTILT 459
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKP 287
++ A+ + A +++ + G+ P
Sbjct: 460 TIMDAHGKNGDFDSAVNWFKEMALNGLLP 488
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNT 110
L S+ N K E + ++M + Y ++N Y + ++ + +E L
Sbjct: 289 LMSFETNYK--EVSNIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 346
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
P YN+ L A + E A F +++ K PD SY+T+ S Y+ E A
Sbjct: 347 RPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEK 406
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
K + + N V Y +L+ Y ++V+ +++M+ K N T ++ +
Sbjct: 407 FFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRGIKANQTILTTIMDAHG 466
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
K G+F+ A N + E D + NILL+
Sbjct: 467 KNGDFDSAVNWFKEMALNGLLPDQKAKNILLS 498
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 152/345 (44%), Gaps = 5/345 (1%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE+L R P T + ++ Y K EA +L+E+ G + + YN +L
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRK 355
Query: 93 NGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G++D+ ++ +E+KK+ +P++ TYN+ + + A + ++K + P+ +
Sbjct: 356 MGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTV 415
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ + K + ++A ++M+ + C + + + SL+ +G D+ +I++KM+
Sbjct: 416 NIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD 475
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ N YT +I + G E IY + + + + D ++ N + + E
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
+ + + ++ P ++ +L G +K G + E F + V D R
Sbjct: 536 GRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM--KEQGCVLDTRAYNIV 593
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ + G ++ A LL ++ G T + Y S++ AK ++
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 141/311 (45%), Gaps = 5/311 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACA 125
L ++M E G+ + ++ + G++D +L E+K ++ D+V YN+ + +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A K F E++ + PD ++Y+++ + K ++A + +EK
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++++ Y + G DE + ++ + + + Y C+++ L K+G+ ++A +++E
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + NIL+ +L+ A + + G+ P T ++ K ++
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYN 364
++ F++ + PD + + L + G +D A + + ++ ++ +Y
Sbjct: 429 DEACAIFEQM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYT 486
Query: 365 SLLRTYAKAGK 375
SL++ + G+
Sbjct: 487 SLIKNFFNHGR 497
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 38/289 (13%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + + PD + S L+H ++ + E L M E G + YN +++ +
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+++K Q+L+E+K K P VVTY + A + + A F E K +I+ + +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 152 YSTLTSLY-----------------------------------IKMELPEKAATTLKEME 176
YS+L + +K E +A + M+
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
+ C N+V Y L++ + ++ W++M K + YT +IS L K G
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+A ++D +++ G D N ++ N N+ A S + +G+
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 134/343 (39%), Gaps = 11/343 (3%)
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 137
CP YN +L + D + Q+L E+ P V T + +C N
Sbjct: 97 CPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVV 156
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
++K K P + +Y+TL + + + T ++M++ +++L+ +
Sbjct: 157 QNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G D L + +M S + Y I S K+G+ + A + E E+ D
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF--KKA 315
++ N+L+ A + L PC + + GY G+ ++ ++A
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
GS+ + + ++T L + G +D A + ++ + YN L+ +AGK
Sbjct: 337 KGSIPSVIAYNCILTC----LRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 376 MPLIIVER--MQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
+ R MQK + + T ++ ++ + E +IF
Sbjct: 393 LDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIF 435
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 131/299 (43%), Gaps = 5/299 (1%)
Query: 18 QRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECG 75
R+ ++Q L FE + K+ PD T +L+ + + +A + EKM +
Sbjct: 420 DRLCKSQKLDEACA--IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD 477
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAE 134
+ Y ++ + ++G+ + ++ +++ +N SPD+ N ++ + E
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
F E+K + PD SYS L IK + M+++ C + AY+ ++ +
Sbjct: 538 AMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G ++ ++ ++M + + Y VI L K+ ++A +++E +S +
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ + L+ + +++ A L+ KG+ P TW L +K ++ + L CF+
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 716
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 158/393 (40%), Gaps = 67/393 (17%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP------------------LPYNHM 86
P ++L+HSY K A A L+ +M+ CG CP LP +
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG---CPPGYVVYNIFIGSICGQEKLPSPDL 168
Query: 87 LNLY------------------ISN--------GQLDKVPQMLQE-LKKNTSPDVVTYNL 119
L+L ++N G+ DK Q+++E ++K PD TY+
Sbjct: 169 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ E A F E+K + PD +Y+ L + K L E+A +EM
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C V Y++L+ Y + I+ +M+ + ND Y ++ L K G KA
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348
Query: 240 NIYDEWESISGTGDPR-----------VPNI-----LLAAYINRNQLEMAESFYNRLVTK 283
+Y + S + D PN+ L+ ++++ A + +++
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G +P + ++ L G+ K G+++ E F + ++P T+ +++ + G +D
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC--GYLPSVHTYTSLIDRMFKDGRLD 466
Query: 344 GAEHLLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
A +L L+++ + Y +++ + G+
Sbjct: 467 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/355 (18%), Positives = 144/355 (40%), Gaps = 32/355 (9%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H+Y++ K+ +A + +M + G + Y +++ G + K ++ +L
Sbjct: 295 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354
Query: 107 -----------------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +P+VVTY + + + A + + + +P+
Sbjct: 355 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 414
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I Y L + K + A +M K + Y+SL+ G D +++ +
Sbjct: 415 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 474
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ N YT +I L ++GE EKA + E + + L+ +
Sbjct: 475 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 534
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR-----KWVP 324
++++ + ++ KG P Y T+ +L G ++K + +G ++ K++
Sbjct: 535 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA----RLLLGEMKQTYWPKYLQ 590
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKMPL 378
+R ++K + +L + + G V +Y L+ ++KAG++ +
Sbjct: 591 GYRCAIQGFSK-----SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 640
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 156/377 (41%), Gaps = 17/377 (4%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ Q L E++ +P +G LL +YV +AE + KM + F
Sbjct: 214 IAKVQGLHKA--ESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDLEFPMT 271
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
YN +L LY N + +L K+N P TY + + A D E+
Sbjct: 272 TFAYNQVLVLYKRNDRRKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGMEQVVDT 331
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K I+ D + L Y+ L +KA TLKEME+ + +R LL LY +
Sbjct: 332 MKAEGIELDVFALCLLAKHYVSCGLKDKAKATLKEMEEINSKGSRWPCRLLLPLYGELEM 391
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN- 258
+DEV R+W+ A + E I + KL +AE I+D + + ++
Sbjct: 392 EDEVRRLWEICE---ANPHIEECMAAIVAWGKLKNIHEAEKIFD--KVVKTWPKKKISTK 446
Query: 259 ---ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
++ Y + L + N++ G W+ + Y++ G++EK KA
Sbjct: 447 HYCTMIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVKLYVEAGEVEKADTFLVKA 506
Query: 316 IG--SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAK 372
+ +R +R + Y + +GD+ AE + +R +G+ + +L++ Y
Sbjct: 507 VKKYEMRPLYCSYRTLMNHYAR---RGDVHNAEKIFYKMRQSGYGPWFNQFETLIQAYVN 563
Query: 373 AGKMPLIIVERMQKDNV 389
+ + ERM D +
Sbjct: 564 SKTPAYGMRERMMADKL 580
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 157/354 (44%), Gaps = 22/354 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQML 103
T + ++H V+ + EA L M E KCP + Y +++ Y GQ++ +
Sbjct: 153 TLNIIIHCLVKIGQCGEAIELFNSMRE-RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIF 211
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ + P++V YN L A AS+ A F +KK + PD +SY++L + Y +
Sbjct: 212 DLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRS 271
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
PEKA +M+K +C+ N+V+Y++L+ Y + G E + + +M + +
Sbjct: 272 AQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSI 331
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ ++++ + + + E I + S + N + +Y++ E A Y +
Sbjct: 332 STLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRE 391
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+KP T+ +L G K G+ + L F+ + D ++ + KL E
Sbjct: 392 SNVKPDAVTYNILISGSSKLGKYTESLRFFEDMV--------DSKVSSTKEGKLSE---- 439
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLIIVERMQKDNVQMDA 393
AE +++ +G + Y +L++ Y G K + + M+ + + DA
Sbjct: 440 --AESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 491
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 139/359 (38%), Gaps = 41/359 (11%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
D ++ Y ++ + +A L +M E YN +++ + GQ ++++
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMED 71
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ P TYN + AC + + + A + ++ + + PD ++++ + S
Sbjct: 72 MLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQ 131
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM--NDAEY 222
KA + + M+ + + ++ +G E + ++ M K + Y
Sbjct: 132 YSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY 191
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T ++ S G+ E + I+D + + N LL AY +R A + +N +
Sbjct: 192 TSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK 251
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G++P ++ L Y + Q EK E F NK++
Sbjct: 252 NGLRPDIVSYTSLLNAYGRSAQPEKAREVF---------------------NKMK----- 285
Query: 343 DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+N+ + YN+L+ Y AG K + ++ M+KD +Q D + L
Sbjct: 286 ----------KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTL 334
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 44/312 (14%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + S LL + + ++ E ++E G + YN + Y+S G +K ++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKET------------------------AEKAF 137
+++ N PD VTYN+ ++ +S+ K T AE F
Sbjct: 386 YTSMRESNVKPDAVTYNILISG-SSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTF 444
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+KK+ PD ++Y+TL Y ++A KEME + + SSL+ +
Sbjct: 445 SSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKG 504
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA----ENIYDEWESISGTGD 253
G + VL++ + M +N Y +I+S + +++ A E + SIS
Sbjct: 505 GEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTL 564
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
V N L N +++ FY ++VT +T+ ++ L G+ K +E
Sbjct: 565 NHVLNFLGKCGKTENMMKL---FY-KMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIE--- 617
Query: 314 KAIGSVRKWVPD 325
V +W+ D
Sbjct: 618 -----VLQWMED 624
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 148/360 (41%), Gaps = 9/360 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+A Q + F + + G DT S L+ +++ K A L ++M+ G
Sbjct: 137 VKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHA 196
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
+ +L GQ +E+ K PD VTYN + + + + A + E+
Sbjct: 197 GVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 256
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
P+ SY+T+ + K E A L++M R C + V+Y+++++ +
Sbjct: 257 VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQV 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
DE R+ KM+ + N Y ++ ++G+ + A + + + N +
Sbjct: 317 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 376
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ + RN +E A ++ G P + + G+ K G++ + + ++ I R
Sbjct: 377 MHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR--R 434
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLL---VTLRNAGHVSTEIYNSLLRTYAKAGKMP 377
PD ++ + L + ID A+ LL + + A V Y+ L+ KA ++P
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA--YSILIHALCKAKRLP 492
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 159/364 (43%), Gaps = 14/364 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S +++ + + EA +M+KM + G + Y +++ + G LD ++
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++++ ++ P+ +TYN + +ND E A + + +T PD I+YST+ S + K
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+A L++M +R CR + S+L+ D + + + + +
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +I +L K +AE+ D D N ++ ++ A ++R+
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537
Query: 282 TKGIKPCYTTWELLTWGYLKKGQME---KVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
G+ P T+ ++ + K ++ K+LE K+A K VPD +A N L +
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA-----KCVPDVVTYSALINGLCK 592
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAET 395
G +D A + + G + YN+L+ K K+ ++E M+K + D+ T
Sbjct: 593 AGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSIT 652
Query: 396 QKVL 399
L
Sbjct: 653 YTCL 656
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 12/276 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQMLQ 104
TC+ LL + ++ K+ +A + C P + +++ G + ++L+
Sbjct: 846 TCNCLLQALLRLKRPKDALQVYRNKLCCS----PNMFTFTILIHGLCRAGDIGTAYELLK 901
Query: 105 ELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKM 162
E+ ++ P +V+ +N+ + S ++A + F E++++ PD +YST+ +K
Sbjct: 902 EMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKS 961
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ A +++M + C N V YSSLL G DE + ++M N Y
Sbjct: 962 GKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 1021
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRL 280
+I KLG ++A ++ +E + G P V +LL A+ + E A +
Sbjct: 1022 NTIIDGHCKLGRIDEAYHLLEEM--VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 1079
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
V KG P T+ L + KK ++E+ + I
Sbjct: 1080 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 9/269 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S ++ S V++ K +A L+E M G + Y+ +L+ G+LD+ +
Sbjct: 946 PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
LQ + + SP++VTYN + + A E+ P+ ++Y+ L + K
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 1065
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM---N 218
E A ++ M ++ N Y+SLL ++ KDEV R + + S+ K N
Sbjct: 1066 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK---KDEVERACQLLSSMIQKGCVPN 1122
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y VI+ L K + + + ++ S + D N ++ A ++++A +N
Sbjct: 1123 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 1182
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ G P T+ L G K + ++
Sbjct: 1183 LIQESGCTPNLVTYNSLVHGLCKSRRFDQ 1211
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 1/229 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S L+H+ + K+ EAE+ ++ M + + YN +++ + +++ + ++
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PDVVTY++ + + N+ ++A K +K+ K PD ++YS L + K +K
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM C N V Y++L+ + ++ + + M + YTC+I+
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
L E+A + E + D LL A N LE+ E
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++++ ++++ +A L ++M G + + Y+ +++ + + LD +M
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKM 567
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+ +K+ PDVVTY+ + + A F E+ P+ ++Y+TL K
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCK 627
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E+AA L+ M K++C + + Y+ L++ N +E R+ ++M +
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687
Query: 222 YTCVISSLVKLGEFEKAENIYDEWES 247
Y ++ +L K E E + E E+
Sbjct: 688 YGTLLRALQKTNNLELVEQLLKEMEA 713
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 9/304 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + ++ + + + A L + E G + YN +++ + + D+ +
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215
Query: 103 LQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
L+E+ K+ SPD++TYN + + A K FL++ + PD ++YS + S
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K ++A L+ M K + Y +L+ + G D+ L I + ++S + +
Sbjct: 1276 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
++ I L K G +A + + D N LL + + + E A + +
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Query: 281 VTKGIKPCYTTWELLTWGYL--KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
G +P T+ L G+L KK + + E K + + K +H L + +E
Sbjct: 1396 RQCGCEPDNATYTTLV-GHLVDKKSYKDLLAEVSKSMVDTGFKL--NHELSSKLEASIEV 1452
Query: 339 QGDI 342
+ D+
Sbjct: 1453 EADV 1456
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PDVVTYN + A F ++ + PD ++YS + + K
Sbjct: 502 VKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNL 561
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L+ M++ C + V YS+L++ G D+ ++++M+ N Y +
Sbjct: 562 DSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTL 621
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K+ + E+A + + S T D L+ N ++LE A + KG
Sbjct: 622 IDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGC 681
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
P T+ L K +E V + K+
Sbjct: 682 LPDRMTYGTLLRALQKTNNLELVEQLLKE 710
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 56/339 (16%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +LN G +D++ Q+ E L+ P++ TYN + + E A + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ +DPD+ +Y++L Y + + + A EM + CR+N VAY+ L+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC------ 299
Query: 202 EVLRIWKKMMSLFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
V R + M LF KM D E YT +I SL +A N+ E E +
Sbjct: 300 -VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK- 313
+L+ + ++ + E A +++ KG+ P T+ L GY K+G +E ++ +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 314 --------------------------KAIGSV-----RKWVPDHRLITAAYNKLEE---- 338
KA+G + RK +PD YN L +
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPD----VVTYNSLIDGQCR 474
Query: 339 QGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
G+ D A LL + + G V + Y S++ + K+ ++
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 150/345 (43%), Gaps = 11/345 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ S K +A L+ +M E G + + YN ++N Y G ++ +++ +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 107 K-KNTSPDVVTYN-LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ + SP+ TYN L C S K A ++ + K+ PD ++Y++L +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHK--AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ A L M R ++ Y+S++ +E ++ + N YT
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I K G+ ++A + ++ S + + N L+ +L+ A ++V G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
++P +T +L LK G + F++ + S K PD T +G +
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK--PDAHTYTTFIQTYCREGRLLD 655
Query: 345 AEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGK--MPLIIVERMQ 385
AE ++ +R G VS ++ Y+SL++ Y G+ +++RM+
Sbjct: 656 AEDMMAKMRENG-VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 133/342 (38%), Gaps = 23/342 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T +AL+H + K EA L EKM + G +++ + +G D Q+
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L T PD TY ++ + AE ++++ + PD +YS+L Y +
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSL------------------LSLYTNMGYKDEVLRIW 207
A LK M C ++ + SL L +NM D V+ +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR-VPNILLAAYIN 266
+KM+ N Y +I + ++G AE ++D + G V N LL+
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+ A + ++ G P + ++L G KKG+ E+ F+ + + D
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC--GYYEDE 866
Query: 327 RLITAAYNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLL 367
+ + +QG ++ L V +N S++ Y+ L+
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 155/371 (41%), Gaps = 12/371 (3%)
Query: 25 ALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
L ++ + E L DK+ P+ T + +++ Y + EA + K+ E G
Sbjct: 197 GLVDEMKQVYMEMLEDKV-CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 83 YNHMLNLYISNGQLDKVPQMLQE--LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
Y ++ Y LD ++ E LK +V +L C ++ E A F+++
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE-AMDLFVKM 314
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K + P +Y+ L E +A +KEME+ + N Y+ L+ +
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ + +M+ N Y +I+ K G E A ++ + ES + + R N L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ Y N + A N+++ + + P T+ L G + G + ++ + R
Sbjct: 435 IKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL--SLMNDR 491
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--P 377
VPD T+ + L + ++ A L +L G + + +Y +L+ Y KAGK+
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 378 LIIVERMQKDN 388
+++E+M N
Sbjct: 552 HLMLEKMLSKN 562
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 47/287 (16%)
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCR-KNRV-AYSSLLSLYTNMGYKDEVLRIW 207
IS S ++SL+ ++L K A + R K+ V +Y+SLL+L N GY V +I
Sbjct: 88 ISPSHVSSLF-SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 208 KKM-------------MSLFAKMNDAE------------YTCVISSLVKLGEFEKAENIY 242
M + L KMN E Y +++SL + G ++ + +Y
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 243 DEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
E D PNI ++ Y +E A + +++V G+ P + T+ L
Sbjct: 207 MEMLE-----DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 298 GYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
GY ++ ++ + F + G R V LI + L ID A L V +++
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI----HGLCVARRIDEAMDLFVKMKDD 317
Query: 356 GHVST-EIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
T Y L+++ + + L +V+ M++ ++ + T VL
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 49/405 (12%)
Query: 33 NFFENLPDKMRGPDTCSALLHSYV-----QNKKSAEA-EALMEKMSECGFLKCPLPYNHM 86
++FE + PDT + + Y QN K+ + ++ EK SEC + + +
Sbjct: 288 SYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSEC--YPDVVTFTTI 345
Query: 87 LNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
++LY GQ++ L + P++V+YN + A AS + A F E+KK
Sbjct: 346 IHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGF 405
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
PD +SY++L + Y K PEKA + M + C+ N V+Y++L+ Y + G E +
Sbjct: 406 HPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVE 465
Query: 206 IWKKM------------MSLFA-----------------------KMNDAEYTCVISSLV 230
I +M +L A K+N Y I S +
Sbjct: 466 ILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYL 525
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
+GE++KA ++Y + DP N+L++ ++ A F + ++ I
Sbjct: 526 SVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKE 585
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + Y K+GQ+ + F K + PD TA + + + + A L +
Sbjct: 586 VYSSVICAYSKQGQVTEAESMFTKM--KMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643
Query: 351 TLRNAGHVSTEIY-NSLLRTYAKAGKMP--LIIVERMQKDNVQMD 392
+ I +SL+R + K G+ L++ E M++ + +
Sbjct: 644 EMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFN 688
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 152/343 (44%), Gaps = 16/343 (4%)
Query: 44 GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
GPD T + +L +Y + + ++ + E M N ++ + GQ K
Sbjct: 264 GPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAID 323
Query: 102 MLQELKKNTS---PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ +K+ S PDVVT+ + + E + AF + + P+ +SY+ L
Sbjct: 324 IFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGA 383
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y + ++A + E++K + V+Y+SLL+ Y G ++ +++++ M K N
Sbjct: 384 YASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPN 443
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESF 276
Y +I + G +A I E E +G P + +I LLAA Q +S
Sbjct: 444 LVSYNALIDAYGSKGLLTEAVEILHEMER-NGV-QPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAY 333
+ +GIK T + YL G+ +K L ++ +K PD + ++ +
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM--RTKKVKPDPVTYNVLISGC 559
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
K+ + G+ G ++ L+ +S E+Y+S++ Y+K G++
Sbjct: 560 CKMSKYGEALGFLDEMMDLKIP--LSKEVYSSVICAYSKQGQV 600
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 6/297 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ + +AR FFE + + PD T +AL++++ + + A +M+ M
Sbjct: 170 RLHARHNIVDQARGLFFEMQKWRCK-PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 228
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEK 135
YN+++N S+G + + +++ +N PD+VT+N+ L+A N
Sbjct: 229 PPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLS 288
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRT-CRKNRVAYSSLLSL 193
F +K T I PD + + + +K+ KA M EKR+ C + V +++++ L
Sbjct: 289 YFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHL 348
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
Y+ G + + M++ K N Y +I + G ++A ++++E + D
Sbjct: 349 YSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPD 408
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
LL AY + E A + + KP ++ L Y KG + + +E
Sbjct: 409 VVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVE 465
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 58/278 (20%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAAC----------------- 124
YN + Y+S G+ DK + + ++ K PD VTYN+ ++ C
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 125 ------------------ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ Q AE F ++K PD I+Y+ + Y E E
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA+ EME + + +A SSL+ + G +VL + + M N++ + ++
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMV 696
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL-----------EMAES 275
S A ++ EW I G P+I + + NQL M +
Sbjct: 697 S----------ACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKL 746
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
FY ++V G + + T+ +L L G K +E +
Sbjct: 747 FY-KIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQ 783
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 137/342 (40%), Gaps = 50/342 (14%)
Query: 94 GQLDKVPQMLQELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G L+ Q+ + +K KN YN+ + A N + A F E++K + PD +
Sbjct: 140 GSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM- 210
Y+ L + + + A + +M + +R Y++L++ + G E L + KKM
Sbjct: 200 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 259
Query: 211 ---------------------------MSLFAKM-------NDAEYTCVISSLVKLGEFE 236
+S F M + VI LVKLG+
Sbjct: 260 ENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNG 319
Query: 237 KAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
KA +I++ + P V ++ Y Q+E ++ +N ++ +G+KP ++
Sbjct: 320 KAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNA 379
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L Y G ++ F + ++K + PD T+ N + G + A + +
Sbjct: 380 LIGAYASHGMDKEAFSVFNE----IKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 353 RNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
R H + YN+L+ Y G + + I+ M+++ VQ
Sbjct: 436 RR-NHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQ 476
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 134/301 (44%), Gaps = 8/301 (2%)
Query: 24 QALQTRA-RENFFENLPDKMRGPD------TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
+AL R RE + D MRG T + L+ ++ + + AE L+ M E G
Sbjct: 162 RALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGV 221
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ +N ++N G+++ +M E+ ++ +PD V+YN ++ A
Sbjct: 222 RPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F E+ + + PD +++++L + E+A + +M +R R N +++L+ +
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G+ D+ L K+M + + Y +I+ KLG ++A + E E+ D
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVV 401
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+ +L+ Y + A +++ KG+ P T+ L G ++ ++ E F+K
Sbjct: 402 TYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM 461
Query: 316 I 316
+
Sbjct: 462 L 462
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 120/273 (43%), Gaps = 3/273 (1%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ + + PD S L+ Y + EA A+ +M++ G + + + +++
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G L++ ++ +++ + + T+ + + A A E+++ +I P +
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVC 367
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L + Y K+ ++A + EME + + + V YS++LS Y +G D + +KM+
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ Y+ +I L + A ++++ + D L+ + ++
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
A S ++ ++ KG+ P T+ +L G K +
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSAR 520
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 140/331 (42%), Gaps = 10/331 (3%)
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWL-AACASQNDKET 132
G+ L YN +L L +S+ L ++L L+ +P+V TYN+ + A CA +E
Sbjct: 115 GYAPSLLAYNAVL-LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
+++ P+ ++Y+TL + + + + A + M + R + V ++++++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
G ++ +++ +M + Y ++S K G +A ++ E
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D L+ A LE A + ++ +G++ T+ L G+ + G ++ L
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353
Query: 313 KKAI-GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
K+ ++ V + ++ Y KL G +D A L+ + G + Y+++L Y
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKL---GRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410
Query: 371 AKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
K G + +M K V DA T L
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSL 441
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 141/376 (37%), Gaps = 70/376 (18%)
Query: 9 AQVRAQSYRQRVAQAQALQTRA-RENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL 67
A RA + + VA ++ R R N F T +AL+ + +N +A
Sbjct: 304 AMCRAGNLERAVALVGQMRERGLRMNEF-----------TFTALIDGFCRNGFLDDALLA 352
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE---------------------- 105
M++M EC + YN ++N Y G++D+ +++ E
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412
Query: 106 --------------LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
LKK PD +TY+ + + A + F ++ + + PD +
Sbjct: 413 IGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFT 472
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + K +KA + EM K+ + V YS L+ + E R+ K+
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLY 532
Query: 212 ------------SLFAKMNDAEYTCVISSLVKL---GEFEKAENIYDEWESISGTGDPRV 256
+L AE+ V++ L G +A+ +Y D V
Sbjct: 533 YEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSV 592
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ-------MEKVL 309
++L+ + + A SF+ +L+ G P T+ L G ++G ++++L
Sbjct: 593 YSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652
Query: 310 ECFKKAIGSVRKWVPD 325
C A K + D
Sbjct: 653 NCCSLADAETSKALID 668
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 129/275 (46%), Gaps = 5/275 (1%)
Query: 55 YVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK--VPQMLQELKK-NTS 111
Y ++ + +A L++ M + + +N ++N +G L ++L E+++
Sbjct: 4 YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD +TYN ++AC+ ++ + A F E+ ++ PD +Y+ + S++ + ++A
Sbjct: 64 PDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELM 123
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
KE+ ++ + + V Y+SLL + G + V R+ ++++ + + Y +I K
Sbjct: 124 FKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+G + A +YDE +I T D +L+ + +++ A + G+KP T
Sbjct: 184 MGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVT 243
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+ L Y K G+ + F + + S K PD
Sbjct: 244 FSALICAYAKSGRQDDAERTFDRMVESGVK--PDR 276
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 149/330 (45%), Gaps = 17/330 (5%)
Query: 30 ARENFFEN---LPDKMRG----PDTCS--ALLHSYVQNKKSAEAEAL--MEKMSECGFLK 78
AR F++ L D MR PD S L+++ ++ A AL + ++ + G
Sbjct: 5 ARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRP 64
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ YN +++ LD + +E+ PD+ TYN ++ + AE F
Sbjct: 65 DAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMF 124
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
EL + PD ++Y++L + K E+ +E+ K RK+ + Y++++ +Y M
Sbjct: 125 KELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKM 184
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G D L ++ +M ++ + YT ++ SL K+ +A + +E
Sbjct: 185 GRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTF 244
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
+ L+ AY + + AE ++R+V G+KP + ++ + + + K++ ++ I
Sbjct: 245 SALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIK 304
Query: 318 SVRKWVPD---HRLITAAYNKLEEQGDIDG 344
+ PD ++++ AA K E +I+G
Sbjct: 305 D--GYKPDDGLYQVLLAALAKGNEHDEIEG 332
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 120/259 (46%), Gaps = 7/259 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F+ L +K PD T ++LL+++ + E + E++ + GF K + YN M+++
Sbjct: 121 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 180
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G+LD + E++ +PD VTY + + + + A K E+ + P
Sbjct: 181 YGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 240
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++S L Y K + A T M + + +R+AY +L ++ +++ +++
Sbjct: 241 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 300
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+ K +D Y ++++L K E ++ E + + E++ + +IL+ A
Sbjct: 301 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA----E 356
Query: 269 QLEMAESFYNRLVTKGIKP 287
+ S R +G +P
Sbjct: 357 CISQGASLLKRACLQGYEP 375
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 49/405 (12%)
Query: 33 NFFENLPDKMRGPDTCSALLHSYV-----QNKKSAEA-EALMEKMSECGFLKCPLPYNHM 86
++FE + PDT + + Y QN K+ + ++ EK SEC + + +
Sbjct: 288 SYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSEC--YPDVVTFTTI 345
Query: 87 LNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
++LY GQ++ L + P++V+YN + A AS + A F E+KK
Sbjct: 346 IHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGF 405
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
PD +SY++L + Y K PEKA + M + C+ N V+Y++L+ Y + G E +
Sbjct: 406 HPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVE 465
Query: 206 IWKKM------------MSLFA-----------------------KMNDAEYTCVISSLV 230
I +M +L A K+N Y I S +
Sbjct: 466 ILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYL 525
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
+GE++KA ++Y + DP N+L++ ++ A F + ++ I
Sbjct: 526 SVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKE 585
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + Y K+GQ+ + F K + PD TA + + + + A L +
Sbjct: 586 VYSSVICAYSKQGQVTEAESMFTKM--KMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643
Query: 351 TLRNAGHVSTEIY-NSLLRTYAKAGKMP--LIIVERMQKDNVQMD 392
+ I +SL+R + K G+ L++ E M++ + +
Sbjct: 644 EMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFN 688
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 152/343 (44%), Gaps = 16/343 (4%)
Query: 44 GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
GPD T + +L +Y + + ++ + E M N ++ + GQ K
Sbjct: 264 GPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAID 323
Query: 102 MLQELKKNTS---PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ +K+ S PDVVT+ + + E + AF + + P+ +SY+ L
Sbjct: 324 IFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGA 383
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y + ++A + E++K + V+Y+SLL+ Y G ++ +++++ M K N
Sbjct: 384 YASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPN 443
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESF 276
Y +I + G +A I E E +G P + +I LLAA Q +S
Sbjct: 444 LVSYNALIDAYGSKGLLTEAVEILHEMER-NGV-QPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAY 333
+ +GIK T + YL G+ +K L ++ +K PD + ++ +
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM--RTKKVKPDPVTYNVLISGC 559
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
K+ + G+ G ++ L+ +S E+Y+S++ Y+K G++
Sbjct: 560 CKMSKYGEALGFLDEMMDLKIP--LSKEVYSSVICAYSKQGQV 600
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 6/297 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ + +AR FFE + + PD T +AL++++ + + A +M+ M
Sbjct: 170 RLHARHNIVDQARGLFFEMQKWRCK-PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 228
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEK 135
YN+++N S+G + + +++ +N PD+VT+N+ L+A N
Sbjct: 229 PPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLS 288
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRT-CRKNRVAYSSLLSL 193
F +K T I PD + + + +K+ KA M EKR+ C + V +++++ L
Sbjct: 289 YFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHL 348
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
Y+ G + + M++ K N Y +I + G ++A ++++E + D
Sbjct: 349 YSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPD 408
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
LL AY + E A + + KP ++ L Y KG + + +E
Sbjct: 409 VVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVE 465
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 58/278 (20%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAAC----------------- 124
YN + Y+S G+ DK + + ++ K PD VTYN+ ++ C
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 125 ------------------ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ Q AE F ++K PD I+Y+ + Y E E
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA+ EME + + +A SSL+ + G +VL + + M N++ + ++
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMV 696
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL-----------EMAES 275
S A ++ EW I G P+I + + NQL M +
Sbjct: 697 S----------ACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKL 746
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
FY ++V G + + T+ +L L G K +E +
Sbjct: 747 FY-KIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQ 783
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 137/342 (40%), Gaps = 50/342 (14%)
Query: 94 GQLDKVPQMLQELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G L+ Q+ + +K KN YN+ + A N + A F E++K + PD +
Sbjct: 140 GSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM- 210
Y+ L + + + A + +M + +R Y++L++ + G E L + KKM
Sbjct: 200 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 259
Query: 211 ---------------------------MSLFAKM-------NDAEYTCVISSLVKLGEFE 236
+S F M + VI LVKLG+
Sbjct: 260 ENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNG 319
Query: 237 KAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
KA +I++ + P V ++ Y Q+E ++ +N ++ +G+KP ++
Sbjct: 320 KAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNA 379
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L Y G ++ F + ++K + PD T+ N + G + A + +
Sbjct: 380 LIGAYASHGMDKEAFSVFNE----IKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 353 RNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
R H + YN+L+ Y G + + I+ M+++ VQ
Sbjct: 436 RR-NHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQ 476
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 10/333 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
S ++ S +N+ EA L M G + YN ++ ++GQ + + +E L+
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N PDVVT+++ + A + A F ++ + ++PD ++YS+L K L ++
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKE 367
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
++T L EM R R + V +S + ++ G E I M+ + N Y ++
Sbjct: 368 SSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMD 427
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ ++A ++D + D NIL+ Y +++ A+ ++ + KG+ P
Sbjct: 428 GYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T L G + G+ E FKK +GS PD + + + G +D A
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKELFKK-MGS-HGCPPDLITYSTLLSGFCKHGHLDEALA 545
Query: 348 LLVTLRNA----GHVSTEIYNSLLRTYAKAGKM 376
L L+ + HV +I LL KAGK+
Sbjct: 546 LFEALKKSQLKPNHVICKI---LLGGMCKAGKL 575
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 122/284 (42%), Gaps = 5/284 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L+ + + EA ++ KM + + Y+ +++ + + +
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTL 371
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E L +N PDVVT+++W+ + A+ + + + P+ ++Y++L Y
Sbjct: 372 LNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCL 431
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A M + C + ++Y+ L+ Y DE +++ +M N
Sbjct: 432 HSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSIT 491
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+T +IS L + G A+ ++ + S D + LL+ + L+ A + + L
Sbjct: 492 HTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK 551
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+KP + ++L G K G++E E F S+ + PD
Sbjct: 552 KSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL--SIEELQPD 593
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/350 (18%), Positives = 138/350 (39%), Gaps = 45/350 (12%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAAC 124
+++ K+ + GF + +N ++N L I ++ + Q+ + + P V T+ + +
Sbjct: 160 SVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGL 219
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
A ++ + +P+ +SYS + K L +A M
Sbjct: 220 CKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTV 279
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKM----------------------------MSLFAK 216
V Y+SL+ N G + ++K+M +S+F K
Sbjct: 280 VTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGK 339
Query: 217 M-------NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + Y+ +I + K ++++ + +E S + D +I + + +
Sbjct: 340 MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM 399
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---H 326
+ A+S N ++ +G++P T+ L GY QM++ + F + + PD +
Sbjct: 400 VSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVN--KGCAPDVLSY 457
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
++ Y K E ID A+ L + + G I + +L+ +AG+
Sbjct: 458 NILIKGYCKSER---IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 169/381 (44%), Gaps = 19/381 (4%)
Query: 40 DKMRG----PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
D M G PD + L +N ++++A +++ M + G + YN ++N
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352
Query: 94 GQLDKVPQMLQEL-KKNTSPDVVTYN-LWLAACASQNDKETAEKAFLEL-KKTKIDPDWI 150
G++D +L+ + KK PDVVTY+ L C E + L + K+ I PD
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++ + K A M +R N V Y+ L+ Y + G + L +WK
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRN 268
+ N A YT +I+ L K+ A+ ++++ + SGT P V N L+A+ +
Sbjct: 473 VDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRA-SGT-RPTVSEYNTLMASLCRES 530
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+E A + + + P ++ ++ G LK G +E E VPD+
Sbjct: 531 SVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKE--LLLEMLNMNLVPDNIT 588
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLII--VERMQ 385
+ N+ + G +D A L + + GHV + ++SLL+ Y+ GK ++ +++M
Sbjct: 589 FSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMA 648
Query: 386 KDNVQMDAE-TQKVLKITSEM 405
+V +D++ T +L M
Sbjct: 649 DKDVVLDSKLTSTILACLCNM 669
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 157/371 (42%), Gaps = 47/371 (12%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKM--SECGFLKCPLPYNHMLNLYISNGQLDKVP 100
PD S +++ + K+ EA+ L ++M EC + ++ +++ + NG +++
Sbjct: 162 PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECK--PNSVTFSALIDGFCKNGDVEEGF 219
Query: 101 QMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
+L+E++K DV Y+ ++ S+ D E ++ F E+ + + P+ ++YS L +
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K + ++AA L M R + VAY+ L + G + +++ M+ + N+
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEW----------------ESISGTG----------- 252
Y +I+ L K G + A I + + + G G
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNL 399
Query: 253 ----------DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
D N+++ + +L A+ Y +V +G T+ +L GYL
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSA 459
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-E 361
G++ K LE +K A+ S P+ T N L + + A+ L R +G T
Sbjct: 460 GKLTKALELWKDAVDS--GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVS 517
Query: 362 IYNSLLRTYAK 372
YN+L+ + +
Sbjct: 518 EYNTLMASLCR 528
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 151/347 (43%), Gaps = 10/347 (2%)
Query: 35 FENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG 94
++ P+ + +C+ L+ + + K ++ KM+ C + ++ +++
Sbjct: 49 LQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQ 108
Query: 95 QLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
+ +L + K+ +V +NL L D A F +K+ + PD +SY+
Sbjct: 109 KPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYN 168
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
T+ + K + +A KEM+ C+ N V +S+L+ + G +E + ++M +
Sbjct: 169 TVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM 228
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
+ + Y+ +IS G+ E+ + +++E + T + + L+ A + + + A
Sbjct: 229 GLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEA 288
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLECFKKAIGSVRKWVPDHRLIT 330
+ + ++P + +L G K G+ KVL+ K R P++
Sbjct: 289 AQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVK-----RGEEPNNVTYN 343
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A N L ++G +D A +L T+ G + Y++L++ GK+
Sbjct: 344 AIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + + + A+ L K G YN ++ +++ + QE+
Sbjct: 483 TYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEM 542
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ N PDVV++N+ + D E+A++ LE+ + PD I++S L + ++K+
Sbjct: 543 RNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQL 602
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++AA+ + M + V + SLL Y+ G ++V+ + ++M ++ + +
Sbjct: 603 DEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTI 662
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTG 252
++ L + + E I ++ + G
Sbjct: 663 LACLCNMSKDVDIEKILPKFSQHTSVG 689
>gi|356557983|ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 707
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 146/321 (45%), Gaps = 29/321 (9%)
Query: 38 LPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
L +KM G PD TCSA++++Y + +A +L ++ + ++ ++ +Y
Sbjct: 227 LFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYS 286
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G D+ ++ QE+K P+VVTYN L A A+ + E++ + PD+I
Sbjct: 287 MAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMRSNGVSPDFI 346
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L +Y E A KEM+ Y+ LL++Y +MGY D + I+ +M
Sbjct: 347 TYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEM 406
Query: 211 MSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S D+ + +I+ + G+ +AE + +E V L+ Y +
Sbjct: 407 NSSGTCQPDSWTFASLIAIYSRSGKVSEAEGMLNEMIQSGFQPTIFVLTSLVHCYGKAKR 466
Query: 270 LEMAESFYNRLVTKGIKP----CYTTWELLTWGYLKKGQMEKVLECFKKA---IGSVRKW 322
+ + +L+ GI P C + +LT K ++ K+ +C +KA +GSV K+
Sbjct: 467 TDDVVKVFKQLLELGIVPNDHFCCSLLNVLTQA--PKEELGKLTDCIEKANTKLGSVVKY 524
Query: 323 VPDHRLITAAYNKLEEQGDID 343
+ +EE+GD D
Sbjct: 525 L------------VEEEGDGD 533
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 134/300 (44%), Gaps = 25/300 (8%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
N M+N Y + L V Q++K S VV YN+ L + D E AEK F E+ +
Sbjct: 151 NSMVNPYTA---LLAVNYFNQKIKP--SRHVVLYNVTLKLFRASRDFEGAEKLFDEMLQR 205
Query: 144 KIDPDWISYSTLTSLYIK-MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ P+ ++ST+ + K +EL EK + E + TC AY +L N+ D+
Sbjct: 206 GVKPNNFTFSTMVNCANKPVELFEKMSGFGYEPDGITCSAMVYAY----ALSNNV---DK 258
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ ++ + ++ ++ A ++ +I G +++ IY E + + + N LL
Sbjct: 259 AVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLG 318
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
A + + A++ Y + + G+ P + T+ L Y E L +K+ G+
Sbjct: 319 AMLKAEKHRQAKAIYKEMRSNGVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDM 378
Query: 323 VPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTE--IYNSLLRTYAKAGKM 376
D YNKL + G ID A + + ++G + + SL+ Y+++GK+
Sbjct: 379 TAD------LYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTFASLIAIYSRSGKV 432
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 158/354 (44%), Gaps = 16/354 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
LL + V+ KK +L +KM G +N ++N + Q+ +L + LK
Sbjct: 91 LLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLG 150
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD VT + +N A ++ + PD ++Y+ + K A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDAL 210
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
KE+ ++ R N V Y++L++ N G ++ R+ + M+ N Y+ ++ +
Sbjct: 211 DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAF 270
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
VK G+ +A+ I++E +S D + L+ ++++ A ++ +V+KG P
Sbjct: 271 VKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDV 330
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ----GDIDGA 345
++ L G+ K ++E ++ F+K S R V + T YN L + GD+D A
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFRKM--SQRGLVNN----TVTYNTLIQGFFQVGDVDKA 384
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
+ + + G VS +I YN LL G + L+I E MQK + +D T
Sbjct: 385 QEFFSQMDSFG-VSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVT 437
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 151/340 (44%), Gaps = 13/340 (3%)
Query: 4 RRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKS 61
R G+ V R RV+ A +L + E + PD + A++ S + ++
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR--------PDIVAYNAIIDSLCKTRRV 206
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLW 120
+A +++ G + Y ++N ++G+ + ++L++ +K+ +P+V+TY+
Sbjct: 207 NDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSAL 266
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L A A++ F E+ + IDPD ++YS+L + + ++A M + C
Sbjct: 267 LDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ V+Y++L++ + ++ +++++KM N Y +I ++G+ +KA+
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ + +S + D NILL + LE A + + + T+ + G
Sbjct: 387 FFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMC 446
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
K G++E F S++ PD T + L +G
Sbjct: 447 KTGKVEDAWGLFCSL--SLKGLKPDIVTYTTMMSGLCTKG 484
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T +L++ + + + ++A +L++KM E G+ + YN +++ +++
Sbjct: 153 PDRV----TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVND 208
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+E+ +K P+VVTY + + A + ++ K KI P+ I+YS L
Sbjct: 209 ALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLD 268
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++K +A +EM + + + V YSSL++ DE +++ M+S
Sbjct: 269 AFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I+ K E ++ + + N L+ + ++ A+ F+
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+++ + G+ P T+ +L G G +EK L F+
Sbjct: 389 SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+ + K PD S L++ + + K+ + L KMS+ G + + YN ++ +
Sbjct: 318 FDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQ 377
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +DK + ++ SPD+ TYN+ L E A F +++K+++D D ++
Sbjct: 378 VGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVT 437
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+T+ K E A + + + + V Y++++S G + EV ++ KM
Sbjct: 438 YTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKM 496
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 86/217 (39%), Gaps = 2/217 (0%)
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A F E+ KT+ P + ++ L S +KM+ + + K+ME R + ++ +++
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ L + KM+ L + + +++ + A ++ D+ I
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N ++ + ++ A F+ + KGI+P T+ L G G+
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ I RK P+ +A + + G + A+ +
Sbjct: 249 RDMIK--RKITPNVITYSALLDAFVKNGKVLEAKEIF 283
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 5/211 (2%)
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM K + V ++ LLS M D V+ + KKM L + + + VI+
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ A ++ + + D L+ + RN++ A S +++V G +P
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAE 346
+ + K ++ L+ FK+ IG RK + P+ TA N L G + A
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKE-IG--RKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
LL + I Y++LL + K GK+
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKV 276
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 8/299 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ +Y ++ + EAE L +M G + YN +++ Y Q + + +L E++
Sbjct: 352 NTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQD 411
Query: 109 -NTSPDVVTYNLWLAACASQND-KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
P+V +Y ++A Q + A AFL +KK I P SY+ L Y E
Sbjct: 412 MGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHE 471
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA T + M++ + + Y++LL + G +++IWK M+S + + ++
Sbjct: 472 KAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILL 531
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
K G + +A ++ E+ I N+L+ AY Q + + +K
Sbjct: 532 DGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLK 591
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + + Y++ ++ K+ + S + VPD + +Y KL D+ A
Sbjct: 592 PDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQ--VPDPQ----SYQKLRSILDVKAA 644
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 38 LPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
L DK+ G T + LL + + EA ++ + + GF + YN ++N Y GQ
Sbjct: 516 LSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQH 575
Query: 97 DKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++PQ+L+E+ N PD +TY+ + A D + A ++ K+ PD SY L
Sbjct: 576 SRLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQVPDPQSYQKL 635
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
S+ L KAAT KNR S++L +
Sbjct: 636 RSI-----LDVKAAT-----------KNRKDRSAILGI 657
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 8/286 (2%)
Query: 94 GQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G D + +L+ L K DV YN ++ +S + A K + E++ I PD ++
Sbjct: 221 GMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHVTC 280
Query: 153 STLTSLYIKMELPEKAA-TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
S + ++ K K A + M ++ + + +L+ + + G K+E L I +M
Sbjct: 281 SIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEME 340
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
N Y ++ + K E+AE ++ E ++ NIL+ AY R Q E
Sbjct: 341 KKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPE 400
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLI 329
+ E+ + G++P ++ L Y G+ +K+ + A ++K P
Sbjct: 401 IIENLLLEMQDMGLEPNVKSYTCLISAY---GRQKKMSDMAADAFLRMKKVGIKPTSHSY 457
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
TA + G + A ++ G S E Y +LL + +AG
Sbjct: 458 TALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAG 503
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 11/268 (4%)
Query: 45 PD--TCSALLHSYVQNKKSA-EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
PD TCS ++ ++ SA +A ++M+ G ++ + G ++
Sbjct: 275 PDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALI 334
Query: 102 MLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ E+ KK S + + YN + A + N E AE F E+K + P +Y+ L Y
Sbjct: 335 IQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYS 394
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM-GYKDEVLRIWKKMMSLFAKMND 219
+ PE L EM+ N +Y+ L+S Y D + +M + K
Sbjct: 395 RRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTS 454
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--NILLAAYINRNQLEMAESF 276
YT +I + G EKA Y +E++ G P + LL A+ +
Sbjct: 455 HSYTALIHAYSVGGWHEKA---YTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKI 511
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ +++ I+ T+ +L G+ K+G
Sbjct: 512 WKLMLSDKIEGTRVTFNILLDGFAKQGH 539
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 125/274 (45%), Gaps = 3/274 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + + PD T + LL + +A + + M+E G + + Y +++ +
Sbjct: 174 NLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTF 233
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ QL +V ++L+E++ + SPD+ YN + A A + A F ++++ PD
Sbjct: 234 AGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDV 293
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YSTL +Y E+ + +M++ + Y+SL+ ++ GY E + ++
Sbjct: 294 ETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHD 353
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ K +DA Y+ ++S + G +A I+ + T L+++Y
Sbjct: 354 MVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAM 413
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ A Y R+ G+ P + ++ L GY K G
Sbjct: 414 YKDALVSYYRIREAGLDPQVSAYDALIQGYAKGG 447
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 127/322 (39%), Gaps = 20/322 (6%)
Query: 65 EALMEKMSECGFLKCP--------LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVV 115
E L+EK SE F P + ++N Y NGQ + +L +KK P+++
Sbjct: 95 EGLLEKCSEI-FEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLI 153
Query: 116 TYNLWLAACASQN-DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
TYN L AC+ D E F +++ I PD I+Y+TL S L E+AA K
Sbjct: 154 TYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKT 213
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + + V Y SL+ + V + ++M + A Y +I + G
Sbjct: 214 MNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGN 273
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
A ++ + + D + LL Y N+ E S ++ + P T+
Sbjct: 274 VHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNS 333
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA----EHLLV 350
L + + G ++ + F + S K PD +A + G A +H+L
Sbjct: 334 LIQVFGEGGYFQESINLFHDMVDSGVK--PDDATYSALLSVCGRGGLTREAAKIHQHMLT 391
Query: 351 TLRNAGHVSTEIYNSLLRTYAK 372
N S E L+ +Y K
Sbjct: 392 ---NESTPSLEASAGLISSYGK 410
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 148/331 (44%), Gaps = 3/331 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ +++QN + +A ++++M E G YN ++ ++D+ L E+ +
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P+ TY +++ ++ +A+K E+++ + P+ + + L + Y K +
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + + M + + Y+ L++ D+ I+++M + Y +I+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
KLG +KA +I+DE T + + N+LL + ++E A+ + + KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + GY K G + + F + ++ VPD + T + D++ A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 348 LLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
+ T + ST +N+L+ K GK L
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 5/333 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T A + Y++ + A A+ +++M ECG L + ++N Y G++ + + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ D TY + + + + AE+ F E++ I PD SY L + + K+
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA++ EM + N + Y+ LL + G ++ + +M N Y +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ +A ++DE + D V L+ N +E A + + KG
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGC 762
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWV-PDHRLITAAYNKLEEQGDID 343
+ L K G+ E E + + GS ++ P+ + L ++G+++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
A+ L ++NA + T I Y SLL Y K G+
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 4/287 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y ++ ++ N + ++L+E+K + +PD+ YN + + + A +E+
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + P+ +Y S YI+ A +KEM + N+V + L++ Y G
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E ++ M+ + YT +++ L K + + AE I+ E D +L+
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ ++ A S ++ +V +G+ P + +L G+ + G++EK E + SV+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM--SVKG 692
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
P+ + + GD+ A L ++ G V + +Y +L+
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 4/330 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
++L+ Y + K + L+ +M + + P Y ++ S+G LD +++E +
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P+VV Y + + A + E+K+ I PD Y++L K + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + L EM + + N Y + +S Y + K+M N T +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G+ +A + Y GD + +L+ ++++ AE + + KGI P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ +L G+ K G M+K F + + P+ + G+I+ A+
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
LL + G H + Y +++ Y K+G +
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 135/354 (38%), Gaps = 56/354 (15%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + K PD S L++ + + +A ++ ++M E G + YN +L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ +G+++K ++L E+ K P+ VTY + D A + F E+K + PD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEK------------------------------- 177
Y+TL ++ E+A T +K
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 178 -------RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
R + N V Y+ ++ G + ++ +M + YT +++
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA-----ESFYNRLVTKGI 285
K+G + ++DE + D + ++++ A++ A + F V G
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 286 KPCYTTWELLTWGYLKKGQM---EKVLECFKKAIGSVR-KWVPDHRLITAAYNK 335
K +T L G+ K G+M EKV+E VR +++PD + N+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVME------NMVRLQYIPDSATVIELINE 959
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/415 (18%), Positives = 157/415 (37%), Gaps = 57/415 (13%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L+ + K+ +A++L+ +M G Y+ +++ + D ++ E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 107 KK---NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
N P Y+ + + + E A+ F + + + P +Y++L Y + +
Sbjct: 339 VSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ L EM+KR + Y +++ + G D I K+M++ + N YT
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I + ++ F A + E + D N L+ +++ A SF +V
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKK------------AIGSVRKWVPDHRLITA 331
G+KP T+ GY++ + + K+ G + ++ ++I A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 332 --AYNKLEEQG-------------------DIDGAEHLLVTLRNAGHVSTEI--YNSLLR 368
AY + +QG +D AE + +R G ++ ++ Y L+
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLIN 635
Query: 369 TYAKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEMPV 407
++K G M P +I+ M E +K ++ EM V
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 8/299 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ +Y ++ + EAE L +M G + YN +++ Y Q + + +L E++
Sbjct: 352 NTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQD 411
Query: 109 -NTSPDVVTYNLWLAACASQND-KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
P+V +Y ++A Q + A AFL +KK I P SY+ L Y E
Sbjct: 412 MGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHE 471
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA T + M++ + + Y++LL + G +++IWK M+S + + ++
Sbjct: 472 KAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILL 531
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
K G + +A ++ E+ I N+L+ AY Q + + +K
Sbjct: 532 DGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLK 591
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + + Y++ ++ K+ + S + VPD + +Y KL D+ A
Sbjct: 592 PDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQ--VPDPQ----SYQKLRSILDVKAA 644
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 38 LPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
L DK+ G T + LL + + EA ++ + + GF + YN ++N Y GQ
Sbjct: 516 LSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQH 575
Query: 97 DKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++PQ+L+E+ N PD +TY+ + A D + A ++ K+ PD SY L
Sbjct: 576 SRLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQVPDPQSYQKL 635
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
S+ L KAAT KNR S++L +
Sbjct: 636 RSI-----LDVKAAT-----------KNRKDRSAILGI 657
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 8/286 (2%)
Query: 94 GQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G D + +L+ L K DV YN ++ +S + A K + E++ I PD ++
Sbjct: 221 GMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHVTC 280
Query: 153 STLTSLYIKMELPEKAA-TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
S + ++ K K A + M ++ + + +L+ + + G K+E L I +M
Sbjct: 281 SIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEME 340
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
N Y ++ + K E+AE ++ E ++ NIL+ AY R Q E
Sbjct: 341 KKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPE 400
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLI 329
+ E+ + G++P ++ L Y G+ +K+ + A ++K P
Sbjct: 401 IIENLLLEMQDMGLEPNVKSYTCLISAY---GRQKKMSDMAADAFLRMKKVGIKPTSHSY 457
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
TA + G + A ++ G S E Y +LL + +AG
Sbjct: 458 TALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAG 503
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 7/202 (3%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
KK S + + YN + A + N E AE F E+K + P +Y+ L Y + PE
Sbjct: 341 KKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPE 400
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNM-GYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
L EM+ N +Y+ L+S Y D + +M + K YT +
Sbjct: 401 IIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTAL 460
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVT 282
I + G EKA Y +E++ G P + LL A+ + + +++
Sbjct: 461 IHAYSVGGWHEKA---YTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLS 517
Query: 283 KGIKPCYTTWELLTWGYLKKGQ 304
I+ T+ +L G+ K+G
Sbjct: 518 DKIEGTRVTFNILLDGFAKQGH 539
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 142/317 (44%), Gaps = 19/317 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+AL+ +Y + + AEA+ +M + G Y +L ++ + + ++ L
Sbjct: 174 TALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLN 233
Query: 109 NTS----PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ + PD +N+ + E A K F + + I ++Y++L S +
Sbjct: 234 DENSPLKPDQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVTYNSLMSFETDYK- 292
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ + +M++ R + V+Y+ L+S Y ++E L ++++M+ + Y
Sbjct: 293 --EVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNI 350
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNR 279
++ + G E+A+ ++ S D P++ +L+AY+N + +E AE F+ R
Sbjct: 351 LLDAFSISGMVEQAQTVFK-----SMRRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKR 405
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
L+ +P T+ L GY K +E V++ +++ + VR + ++T + +
Sbjct: 406 LIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEEML--VRGIKANQTILTTIMDAYGKS 463
Query: 340 GDIDGAEHLLVTLRNAG 356
GD D A H + + G
Sbjct: 464 GDFDSAVHWFKEMESNG 480
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 112/280 (40%), Gaps = 42/280 (15%)
Query: 23 AQALQTRARENFFENLPDKMRGP-----DTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
Q + R E F+NL + P + +++ Y + +A M+E G
Sbjct: 216 VQGNKYREAEELFDNLLNDENSPLKPDQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQ 275
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTY-------------------- 117
+ + YN +++ ++ + +Q + + PDVV+Y
Sbjct: 276 QTTVTYNSLMSFETDYKEVSNIYDQMQ--RADLRPDVVSYALLVSAYGKARREEEALAVF 333
Query: 118 ---------------NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
N+ L A + E A+ F +++ + PD SY+T+ S Y+
Sbjct: 334 EEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNA 393
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ E A K + + N V Y +L+ Y + + V++ +++M+ K N
Sbjct: 394 DDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTIL 453
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
T ++ + K G+F+ A + + E ES D + N+LL+
Sbjct: 454 TTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLS 493
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
LL ++ + +A+ + + M + Y ML+ Y++ ++ + + L + +
Sbjct: 351 LLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDD 410
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+VVTY + A ND E K + E+ I + +T+ Y K + A
Sbjct: 411 FEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAV 470
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSL 193
KEME ++ A + LLSL
Sbjct: 471 HWFKEMESNGIPPDQKAKNVLLSL 494
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 6/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + + GQ +KV Q+ E+ + + PD VTY+ ++A +++A + E+
Sbjct: 164 YNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEM 223
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+ L +L+ K A + +EM + CR + Y+ L+ G
Sbjct: 224 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 283
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-I 259
DE + +M + + +I+ L K G + A ++ E E++ N I
Sbjct: 284 DEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTI 343
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ A + ++++ S++ R+ GI P T+ +L G+ K +MEK + ++
Sbjct: 344 IKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM--DE 401
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + + L + D A L L+ N G S +Y +++ KAG++
Sbjct: 402 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 459
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 137/346 (39%), Gaps = 7/346 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + + PD T + L+ + + EA +M G + N+M+N
Sbjct: 253 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL 312
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPD 148
G+LD ++ QE++ P VVTYN + A + + ++ E +K++ I P
Sbjct: 313 GKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 372
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS L + K EKA L+EM+++ AY SL+ D +++
Sbjct: 373 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 432
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
++ + Y +I L K G + A N++DE + D N L++
Sbjct: 433 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTG 492
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
L+ A S R+ G P ++ ++ G K G + +E S + PD
Sbjct: 493 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR--PDVVS 550
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
L G + A L+ + G I Y+S+L K
Sbjct: 551 YNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 596
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 9/239 (3%)
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND-AEYTCV 225
+A T +++ R C+ AY+S++ + + G ++V +++ +M + D Y+ +
Sbjct: 144 QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSAL 203
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ KLG + A + +E + I ++ +L+A + N A S + + +
Sbjct: 204 ISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYC 263
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P T+ L G K G++++ F + PD + N L + G +D A
Sbjct: 264 RPDVFTYTELIRGLGKAGRIDEAYHFFCEM--QREGCRPDTVFMNNMINFLGKAGRLDDA 321
Query: 346 EHL---LVTLRNAGHVST--EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L + TLR V T I +L + ++A ++P ERM++ + + T +L
Sbjct: 322 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWF-ERMKESGISPSSFTYSIL 379
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 146/330 (44%), Gaps = 4/330 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+ L+ + + K+S E ++++++M G + Y ++N ++ + Q+ +E+
Sbjct: 306 ATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFA 365
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ + TY + D E AE F E+ I PD +Y+ L Y K++ EK
Sbjct: 366 RKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEK 425
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L E++K N ++++ + G ++++M+S K N YT ++
Sbjct: 426 AYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVK 485
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
LVK G FE+A I + + D N ++ + ++E +S+ ++ KG+KP
Sbjct: 486 GLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKP 545
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ GY + G+M+ F + + S P+ + T + + G+ A
Sbjct: 546 NVYTYGAFIHGYCRAGEMQAAERSFIEMLDS--GIAPNDVICTDLIDGYCKDGNTTKAFA 603
Query: 348 LLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+ + G + + ++ L+ +K GK+
Sbjct: 604 KFRCMLDQGVLPDVQTHSVLIHGLSKNGKL 633
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 146/313 (46%), Gaps = 18/313 (5%)
Query: 75 GFLKCPLP----YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQND 129
G L +P Y +++N Y G++++ +L +++ K P++VTY++ +A D
Sbjct: 223 GMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGD 282
Query: 130 KETAEKAFLELKKTKID----PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A LELK++ + PD Y+TL + + + + + L EM + + V
Sbjct: 283 VDEA----LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV 338
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
AY++L++ + ++ ++M + K+N Y +I L K+G+ EKAE+++ E
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM 398
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ D + N L+ Y +E A + + + + G G +
Sbjct: 399 TMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDL 458
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--Y 363
+ E F++ I K P+ + T L ++G + A +L +++ G +S ++ Y
Sbjct: 459 TRANELFQEMISWGLK--PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG-LSPDVFCY 515
Query: 364 NSLLRTYAKAGKM 376
N+++ + KAGKM
Sbjct: 516 NTVIIGFCKAGKM 528
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 163/379 (43%), Gaps = 12/379 (3%)
Query: 28 TRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
TRA E F E + ++ P+ + ++ V+ + EA ++ M + G YN
Sbjct: 459 TRANELFQEMISWGLK-PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517
Query: 86 MLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++ + G++++ L E + K P+V TY ++ + + AE++F+E+ +
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
I P+ + + L Y K KA + M + + +S L+ + G E +
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
++ +++ + YT +IS+L K G+ + A ++D+ + N L+
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKW 322
++ A ++ + KG+ T+ + GY K + + + F K +G
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGV---- 753
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLII 380
PD + A + + G+ + A L + + G ST +N+L+ + K GK+ +
Sbjct: 754 PPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQL 813
Query: 381 VERMQKDNVQMDAETQKVL 399
VE M +++ + T +L
Sbjct: 814 VEDMVDNHITPNHVTYTIL 832
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+A + +A E F + D P+ C+ L+ Y ++ + +A A M + G L
Sbjct: 558 CRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDV 617
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
++ +++ NG+L + + EL K PDV TY ++ + D + A + +
Sbjct: 618 QTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDD 677
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ K I+P+ ++Y+ L + K+ KA + ++ +N V YS++++ Y
Sbjct: 678 MCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSAN 737
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW--ESISGTGDPRVP 257
E +++ M + + Y +I K G EKA +++ E I+ T P
Sbjct: 738 LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST--PAF- 794
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
N L+ + +L A +V I P + T+ +L + G +++ + F
Sbjct: 795 NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLF 849
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 137/329 (41%), Gaps = 4/329 (1%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK- 108
AL+H + +AE L +M+ G YN ++ Y ++K ++L E+KK
Sbjct: 377 ALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKE 436
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
N + + + D A + F E+ + P+ + Y+T+ +K E+A
Sbjct: 437 NLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEA 496
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L M+ + + Y++++ + G +E +M++ K N Y I
Sbjct: 497 IKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
+ GE + AE + E + + L+ Y A + + ++ +G+ P
Sbjct: 557 YCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPD 616
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T +L G K G++++ + F + + + VPD T+ + L ++GD+ A L
Sbjct: 617 VQTHSVLIHGLSKNGKLQEAMGVFSELLD--KGLVPDVFTYTSLISNLCKEGDLKAAFEL 674
Query: 349 LVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ G + + YN+L+ K G++
Sbjct: 675 HDDMCKKGINPNIVTYNALINGLCKLGEI 703
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 121/307 (39%), Gaps = 35/307 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL++ + + A+A L + + E G + + Y+ ++ Y + L + Q+ +
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFL--------------------------- 138
K PD Y + C + E A FL
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLI 808
Query: 139 -------ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
++ I P+ ++Y+ L + + ++A EM+KR N + Y+SLL
Sbjct: 809 EAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLL 868
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
Y +G + E+ ++ +M++ K +D ++ ++ + +K G + KA + D+ S
Sbjct: 869 HGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVN 928
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
+ IL+ A N L + + +G K T L + + G+ ++ L
Sbjct: 929 VCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRV 988
Query: 312 FKKAIGS 318
+ + S
Sbjct: 989 LESMVRS 995
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 148/331 (44%), Gaps = 3/331 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ +++QN + +A ++++M E G YN ++ ++D+ L E+ +
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P+ TY +++ ++ +A+K E+++ + P+ + + L + Y K +
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + + M + + Y+ L++ D+ I+++M + Y +I+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
KLG +KA +I+DE T + + N+LL + ++E A+ + + KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + GY K G + + F + ++ VPD + T + D++ A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 348 LLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
+ T + ST +N+L+ K GK L
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 5/333 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T A + Y++ + A A+ +++M ECG L + ++N Y G++ + + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ D TY + + + + AE+ F E++ I PD SY L + + K+
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA++ EM + N + Y+ LL + G ++ + +M N Y +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G+ +A ++DE + D V L+ N +E A + + KG
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGC 762
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWV-PDHRLITAAYNKLEEQGDID 343
+ L K G+ E E + + GS ++ P+ + L ++G+++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
A+ L ++NA + T I Y SLL Y K G+
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 4/287 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y ++ ++ N + ++L+E+K + +PD+ YN + + + A +E+
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + P+ +Y S YI+ A +KEM + N+V + L++ Y G
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E ++ M+ + YT +++ L K + + AE I+ E D +L+
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ ++ A S ++ +V +G+ P + +L G+ + G++EK E + SV+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM--SVKG 692
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
P+ + + GD+ A L ++ G V + +Y +L+
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 4/330 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
++L+ Y + K + L+ +M + + P Y ++ S+G LD +++E +
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P+VV Y + + A + E+K+ I PD Y++L K + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + L EM + + N Y + +S Y + K+M N T +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G+ +A + Y GD + +L+ ++++ AE + + KGI P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ +L G+ K G M+K F + + P+ + G+I+ A+
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
LL + G H + Y +++ Y K+G +
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 135/354 (38%), Gaps = 56/354 (15%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + K PD S L++ + + +A ++ ++M E G + YN +L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ +G+++K ++L E+ K P+ VTY + D A + F E+K + PD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEK------------------------------- 177
Y+TL ++ E+A T +K
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 178 -------RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
R + N V Y+ ++ G + ++ +M + YT +++
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA-----ESFYNRLVTKGI 285
K+G + ++DE + D + ++++ A++ A + F V G
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 286 KPCYTTWELLTWGYLKKGQM---EKVLECFKKAIGSVR-KWVPDHRLITAAYNK 335
K +T L G+ K G+M EKV+E VR +++PD + N+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVME------NMVRLQYIPDSATVIELINE 959
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/415 (18%), Positives = 157/415 (37%), Gaps = 57/415 (13%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L+ + K+ +A++L+ +M G Y+ +++ + D ++ E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 107 KK---NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
N P Y+ + + + E A+ F + + + P +Y++L Y + +
Sbjct: 339 VSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ L EM+KR + Y +++ + G D I K+M++ + N YT
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I + ++ F A + E + D N L+ +++ A SF +V
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKK------------AIGSVRKWVPDHRLITA 331
G+KP T+ GY++ + + K+ G + ++ ++I A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 332 --AYNKLEEQG-------------------DIDGAEHLLVTLRNAGHVSTEI--YNSLLR 368
AY + +QG +D AE + +R G ++ ++ Y L+
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLIN 635
Query: 369 TYAKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEMPV 407
++K G M P +I+ M E +K ++ EM V
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 157/404 (38%), Gaps = 49/404 (12%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNL 89
+FE + PDTC+ ++H V+ EA L M E P + Y ++
Sbjct: 280 YFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYS 339
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y GQ + + + + P++V+YN L A AS A + F LK+ + PD
Sbjct: 340 YSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPD 399
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+SY++L + Y + PEKA EM K C+ N+V+Y++L+ Y + G E + +
Sbjct: 400 IVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLH 459
Query: 209 KM-----------------------------------MSLFAKMNDAEYTCVISSLVKLG 233
+M S ++N Y I S + LG
Sbjct: 460 EMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLG 519
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+++KA +Y + + D NIL++ + + F+ ++ I +
Sbjct: 520 DYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYS 579
Query: 294 LLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ Y+K+G++ + F K G PD T + G A L
Sbjct: 580 SVICSYVKQGKLTEAASTFNSMKETGC----FPDVLTYTTLIKAYSDDGSWRRAWDLFKE 635
Query: 352 LRNAGHVSTEIYNSLLRTYAKAGKMP---LIIVERMQKDNVQMD 392
+ N G I S L G P L ++E M++ +Q++
Sbjct: 636 MENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLN 679
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 173/405 (42%), Gaps = 18/405 (4%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMR-GPDTCSALLHSYVQNKKS 61
R +G +R + +V QA+ L FFE + + DT ++L+H++ + +
Sbjct: 152 RNDIYGMMIRLHARHNKVDQARGL-------FFEMQEWRCKPNTDTYNSLIHAHARAGQW 204
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLW 120
A +M+ M YN+++N + G K ++ +++ +N PD++T+N+
Sbjct: 205 CWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIV 264
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-- 178
L+A + A F +K +K+ PD + + + +K+ L +A M +R
Sbjct: 265 LSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRT 324
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
TC + V Y+S++ Y+ G + ++ M++ + N Y ++ + G +A
Sbjct: 325 TCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEA 384
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ + D LL AY Q E A +N + KP ++ L
Sbjct: 385 LETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDA 444
Query: 299 YLKKGQMEKVLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG- 356
Y G +++ + + ++ V + A + ++ ID +L ++ G
Sbjct: 445 YGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKID---IILAAAKSRGI 501
Query: 357 HVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
++T YNS + +Y G K L++ M+ NV+ DA T +L
Sbjct: 502 QLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNIL 546
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 4/291 (1%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+ + T A E F + +R PD S +LL++Y ++ + +A + +M +
Sbjct: 377 SHGMHTEALETFKLLKQNGLR-PDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNK 435
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +++ Y S G L + +L E++++ PDV++ + L AC +
Sbjct: 436 VSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAA 495
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
K I + ++Y++ Y+ + +KA M + + V Y+ L+S +G
Sbjct: 496 AKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGR 555
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E L+ ++ M+ L + Y+ VI S VK G+ +A + ++ + D
Sbjct: 556 YVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTT 615
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
L+ AY + A + + G +P L K GQ E+VL+
Sbjct: 616 LIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQ 666
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 122/327 (37%), Gaps = 46/327 (14%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + S LL + + K+ + + ++ G + YN + Y+S G K +
Sbjct: 468 PDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVL 527
Query: 103 LQELKK-NTSPDVVTYNLWLAA---------------------------------CA--S 126
++ N PD VTYN+ ++ C+
Sbjct: 528 YTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVK 587
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
Q A F +K+T PD ++Y+TL Y +A KEME + + +
Sbjct: 588 QGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIV 647
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
SSL+ G + VL++ + M ++N Y +ISS L +++ A I + +
Sbjct: 648 CSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLD 707
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S + N +L + E + ++VT +T+ +L L G+
Sbjct: 708 SSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWR 767
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAY 333
K +E V +W+ D + Y
Sbjct: 768 KYVE--------VLQWMEDAGVCPTLY 786
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 34 FFENLPD--KMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FFE++ D + S+++ SYV+ K EA + M E G L Y ++ Y
Sbjct: 562 FFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYS 621
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G + + +E++ N T PD + + + A E + +K+ KI +
Sbjct: 622 DDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQK 681
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y + S + + A+ ++ ++ + + +L+ G + +++++ KM
Sbjct: 682 AYFEIISSCTMLRDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRTESMMKLFYKM 741
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEK 237
++ + + + YT ++ +L+ +G++ K
Sbjct: 742 VTSCSTVGLSTYTILLRNLLIVGKWRK 768
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 167/387 (43%), Gaps = 25/387 (6%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+ + D+ P+ S +L Q KK +A+ L KM G + + YN +LN +
Sbjct: 220 LFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFC 279
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G LD +LQ L K+ V+ Y + E A + ++ + I PD +
Sbjct: 280 KSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM 339
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV--LRIWK 208
Y+ + + +A T L EM +R R + + Y++L+ + +MGY DE LR+
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
F N+ Y+ +I + K G KA++I+ E E + N L+ N
Sbjct: 400 SKHDCFP--NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457
Query: 269 QLEMAESFYNRL-----------VTKGIKPCY--TTWELLTWGYLKKGQMEKVLECFKKA 315
+LE A + ++ +++G + + +++ + G + K + +
Sbjct: 458 RLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQL 517
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ S +PD R N + G+I+GA L ++ GH+ + Y +L+ +AG
Sbjct: 518 VDS--GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAG 575
Query: 375 KM--PLIIVERMQKDNVQMDAETQKVL 399
+ L I E+M K ++ T K +
Sbjct: 576 RNEDALEIFEQMVKKGCVPESSTYKTI 602
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 133/333 (39%), Gaps = 9/333 (2%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
V ++Y + +A+++ F+ PD + +LH V+ + A A+ +
Sbjct: 133 VLIEAYSEAGMDEKAVESFGLMRDFDCKPDLF----AFNLILHFLVRKEAFLLALAVYNQ 188
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQND 129
M +C + Y +++ + + E+ + P+ + Y++ L+
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A++ F +++ + + D I+Y+ L + + K + A T L+ + K + Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L++ +E ++KM+ K + YT +I L + G +A + E
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D N L+ + + L+ AES + P T+ +L G K G + K
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428
Query: 310 ECFKKA--IGSVRKWVPDHRLITAAY--NKLEE 338
FK+ +G + V + LI N+LEE
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKANRLEE 461
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 119/301 (39%), Gaps = 6/301 (1%)
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVT--YNLWLAACASQNDKETAE 134
L+C + ++ I + ++LQELK N++ + + +++ + A + E A
Sbjct: 90 LRCRTVQDLIIGKLIKENAFELYWKVLQELK-NSAIKISSEAFSVLIEAYSEAGMDEKAV 148
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
++F ++ PD +++ + ++ E A +M K + V Y L+
Sbjct: 149 ESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGL 208
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+ L ++ +M N Y+ V+S L + + A+ ++ + + D
Sbjct: 209 CKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDL 268
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N+LL + L+ A + L G + L G + + E+ ++K
Sbjct: 269 ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQK 328
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
+ K PD L T L ++G + A LL + G T YN+L++ +
Sbjct: 329 MLRENIK--PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386
Query: 374 G 374
G
Sbjct: 387 G 387
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 18/168 (10%)
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWL 121
A + +ME++ E G + L ++Q + PD+ TYN+ +
Sbjct: 492 ASLQVMMERLCESGMI------------------LKAYKLLMQLVDSGVLPDIRTYNILI 533
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ A K F E++ PD ++Y TL + E A ++M K+ C
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV 593
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
Y ++++ L +W K + F D + V S
Sbjct: 594 PESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESF 641
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
K AEAE +M G L + Y +++ + G + + E+ ++ +PDV+TY
Sbjct: 754 KLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 813
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
++ D A K F E+ ++PD I+++ L + Y K + A M +
Sbjct: 814 AIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA 873
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C N V Y++L+ G D + +M + + N Y +++ L K G E+A
Sbjct: 874 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 933
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E+E+ D L+ AY +++ A+ ++ KG++P T+ +L G
Sbjct: 934 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993
Query: 299 YLKKGQME 306
+ G +E
Sbjct: 994 FCLHGMLE 1001
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 124/293 (42%), Gaps = 5/293 (1%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
RA FF + + PD T +A++ + Q EA L +M G + + +
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850
Query: 87 LNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+N Y G + D ++ SP+VVTY + + D ++A + E+ K +
Sbjct: 851 MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P+ +Y+++ + K E+A + E E + V Y++L+ Y G D+
Sbjct: 911 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAY 264
I +M+ + + +++ G E E + + W G + N L+ Y
Sbjct: 971 ILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIAPNATTFNCLVKQY 1029
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
RN L+ A + Y + ++G++P T+E L G+ M++ F++ G
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKG 1082
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 136/357 (38%), Gaps = 8/357 (2%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S +++ Y + + + L+EKM + G Y ++ L +L + +
Sbjct: 702 PDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEA 761
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E + + PD + Y + + D A K F E+ I PD ++Y+ + S + +
Sbjct: 762 FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 821
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +A EM R + + ++ L++ Y G+ + R+ M+ N
Sbjct: 822 IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT 881
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT +I L K G+ + A + E I + N ++ +E A
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G+ T+ L Y K G+M+K E + +G + P N G
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG--KGLQPTIVTFNVLMNGFCLHGM 999
Query: 342 IDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAET 395
++ E LL + G + +N L++ Y K I + M V+ D +T
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKT 1056
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 110/265 (41%), Gaps = 3/265 (1%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
+V +YN+ + A L ++ PD ISYST+ + Y + +K +
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
++M+++ + N Y S++ L + E + +M+ + YT ++ K
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
G+ A + E S T D +++ + + A ++ ++ +G++P T+
Sbjct: 788 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847
Query: 293 ELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L GY K G ++ I + P+ T + L ++GD+D A LL +
Sbjct: 848 TELMNGYCKAGHIKDAFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905
Query: 353 RNAG-HVSTEIYNSLLRTYAKAGKM 376
G + YNS++ K+G +
Sbjct: 906 WKIGLQPNIFTYNSIVNGLCKSGNI 930
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 3/273 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L++ Y + +A + M + G + Y +++ G LD ++
Sbjct: 842 PDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 901
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E+ K P++ TYN + + E A K E + ++ D ++Y+TL Y K
Sbjct: 902 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 961
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+KA L EM + + V ++ L++ + G ++ ++ M++ N
Sbjct: 962 SGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1021
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ C++ + A IY + S D + L+ + N ++ A + +
Sbjct: 1022 FNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMK 1081
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KG +T+ +L G+ K+ + + E F +
Sbjct: 1082 GKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 5/300 (1%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQ-NDKETAEKAF 137
P ++ + + G L + ++ ++ L V + N++LA + N TA F
Sbjct: 598 PRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVF 657
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E + + + SY+ + ++ +A L ME + + ++YS++++ Y
Sbjct: 658 REFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRF 717
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G D+V ++ +KM K N Y +I L ++ + +AE + E D V
Sbjct: 718 GELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVY 777
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
L+ + R + A F+ + ++ I P T+ + G+ + G M + + F + +
Sbjct: 778 TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML- 836
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
R PD T N + G I A + + AG + Y +L+ K G +
Sbjct: 837 -CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 144/345 (41%), Gaps = 8/345 (2%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + D PD T ++ S Q + +A +++K GF Y + +
Sbjct: 148 FERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCK 207
Query: 93 NGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G+L ++ + + SPD + YN + +ND + A + E+ + K+ PD +Y
Sbjct: 208 TGRLKDALEIFRNIP---SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTY 264
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L K +KA+ L EM R + V ++S++ G + + M
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ + Y +IS L K ++A+++ DE+ S D +IL R +++
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
A + KG P T+ L G K + EK E + + S +VPD T
Sbjct: 385 AFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS--GFVPDVVTYTII 442
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ L ++G +D A ++ + G + I Y +L+ + G++
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 487
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 141/349 (40%), Gaps = 17/349 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F N+P PD + A++H + + A +++M+E YN +++
Sbjct: 217 IFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLC 272
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ DK +ML E+ + +PD VT+N + E A + + P
Sbjct: 273 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 332
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+TL S K + ++A + E + V YS L G DE + K+M
Sbjct: 333 TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINR 267
N Y +I L K + EKA Y+ ES+ +G D I++
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKA---YELLESLVSSGFVPDVVTYTIIVDGLCKE 449
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+L+ A ++ +G P T+ L G + G++++ FK+ + + D
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS--KDCTADAL 507
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ N + A+ ++ +R ++ ++YN+L+ Y K G++
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI--DVYNALMDGYCKEGRL 554
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 135/350 (38%), Gaps = 43/350 (12%)
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETA 133
GF N L + NG D++P M + L +PD TY+L + + N
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQ---I 176
Query: 134 EKAFLELKKTKI----------------------------------DPDWISYSTLTSLY 159
+KAF L K K+ PD I+Y+ + +
Sbjct: 177 DKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGH 236
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+ + A LKEM +R + Y+ L+ D+ + +M+ +
Sbjct: 237 CRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDT 296
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
+ ++ L K G+FE+A ++ + N L++ + ++ A+ +
Sbjct: 297 VTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDE 356
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
V+ G P T+ +L G K+G++++ E K+ G + P+ + L +
Sbjct: 357 FVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSG--KGCTPNLVTYNTLIDGLCKA 414
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQK 386
+ A LL +L ++G V + Y ++ K G++ L +VE M K
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK 464
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 148/349 (42%), Gaps = 14/349 (4%)
Query: 36 ENLPDKMRGP---DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
+ + D +RG D +AL+ Y + + E + E M+ G + YN +++
Sbjct: 526 QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 585
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G++D+ L+ + PDVV+YN+ + + + A + ++ + I PD ++
Sbjct: 586 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 645
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + + K E + A LK M K + V Y++L+S + + + +M+
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705
Query: 212 SLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ Y +I L K G ++A + D + NI + +L
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 765
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH--RL 328
+ A S + + T + YTT + G K Q+++ + ++ + + H L
Sbjct: 766 DEASSLLSEMDTLRDEVSYTT---VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNL 822
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ A+ K + +D A LL + G + I YN ++ K K+
Sbjct: 823 LIDAFTKTKR---LDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKV 868
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKM--SECGFLKCPLPYNHMLNLYISNGQLDKVP 100
PD T + L+ Q + +A LM +M + C C YN +++ G L +
Sbjct: 676 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT-TYNTIIDRLCKEGCLKQAL 734
Query: 101 QMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
++ + + + VTYN+++ + + A E+ + D +SY+T+
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGL 791
Query: 160 IKMELPEKAATTLKEME--KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K E ++A+ +EM K C + ++ L+ +T DE L + M+
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHT-FNLLIDAFTKTKRLDEALTLLGLMVQRGCSP 850
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDE 244
+ Y VI+ L KL + +KA ++DE
Sbjct: 851 SVITYNMVITCLCKLDKVDKAWELFDE 877
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 167/385 (43%), Gaps = 21/385 (5%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A A++ F +L TC+ LL S V+ + ++ + + + G +
Sbjct: 206 ADVFSLLAKKGLFPSL-------KTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHL 258
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
++ M+N + + D + +++K +P+VVTYN + + A + ++
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMV 318
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K K+ P I+YS + IK+E ++A LKEM + N V Y++L+ Y MG
Sbjct: 319 KEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNIS 378
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E L+I M+S N +I K + +AEN+ +E + G G P +
Sbjct: 379 EALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEE---MIGRGLP-INQGSF 434
Query: 262 AAYIN----RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
+ IN + + A F ++ + ++P L G K G+ + +E + + +G
Sbjct: 435 SMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLG 494
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ +VP+ A + L + G++ LL + G V I YN+L+ K GK+
Sbjct: 495 --KGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552
Query: 377 --PLIIVERMQKDNVQMDAETQKVL 399
+ E M K +Q D T +L
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLL 577
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 133/305 (43%), Gaps = 13/305 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H + E L+ M E G + + YN +++ G++ + ++ +E+
Sbjct: 503 TSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM 562
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK PD+ T+NL L + + + A + + E KK P+ +Y + Y K
Sbjct: 563 VKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKV 622
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ L E+ + N V Y+SL+ Y G + R+ M S ++ A Y+ +
Sbjct: 623 EEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSL 682
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
+ L +G + A+++ DE + +PN+ ++ Y Q+ +
Sbjct: 683 MHGLCNIGLVDDAKHLLDEMRK-----EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 737
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
+ I P T+ ++ G+ K G+ ++ + + + + +PD A N L ++G
Sbjct: 738 SSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEM--TEKGILPDAVTYNAFTNGLCKEG 795
Query: 341 DIDGA 345
++ A
Sbjct: 796 KVEEA 800
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 26/343 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T S ++ ++ +K EA ++++MSE GF+ + YN +++ Y G + + ++ +
Sbjct: 328 TYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDM 387
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS-LYIKMEL 164
L K SP+ VT N + + AE E+ + + S+S + + L +K
Sbjct: 388 LSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRF 447
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
A ++EM R R N ++L+S G + E + +W +++ N
Sbjct: 448 V-TALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNA 506
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L K G ++ + + D N L++ +++ +V KG
Sbjct: 507 LIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566
Query: 285 IKPCYTTWELLTWGYLKKGQMEKV----LECFKKAIGSVRKWVPD---HRLITAAY---N 334
I+P T+ LL G ++++ EC K +VP+ + ++ Y N
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNG------YVPNVYTYGVMIDGYCKAN 620
Query: 335 KLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
K+EE E+LL L + +++ +YNSL+R Y G M
Sbjct: 621 KVEE------GENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 1/202 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++ Y + K E E L+ ++ + YN ++ Y NG ++ ++ ++
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + TY+ + + + A+ E++K + P+ + Y+T+ Y K+
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
K L+EM N+ Y+ ++ + +G E ++ +M + Y
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787
Query: 226 ISSLVKLGEFEKAENIYDEWES 247
+ L K G+ E+A + DE S
Sbjct: 788 TNGLCKEGKVEEAFKVCDEMSS 809
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++L+ +Y N A L + M G L Y+ +++ + G +D +L E++K
Sbjct: 645 NSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK 704
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P+VV Y + + E+ I P+ +Y+ + + K+ ++
Sbjct: 705 EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKE 764
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
AA L EM ++ + V Y++ + G +E ++ +M S +++ YT +I
Sbjct: 765 AAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824
Query: 228 S 228
Sbjct: 825 G 825
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 42/298 (14%)
Query: 106 LKKNTSPDVVTYN-LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L K P++VT N L C + N +ET K ++ + + D I+Y+TL S K
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETL-KLLRDMLERGLVFDRITYNTLISGCCKEGK 551
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++ +EM K+ + + ++ LL N DE R+W + N Y
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I K + E+ EN+ +E S + V N L+ AY + A + + ++G
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ T+ L G L G +D
Sbjct: 672 VLLSCATYSSLMHG-------------------------------------LCNIGLVDD 694
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPL--IIVERMQKDNVQMDAETQKVL 399
A+HLL +R G + + Y +++ Y+K G+M I+++ M N+ + T ++
Sbjct: 695 AKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIM 752
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 147/332 (44%), Gaps = 4/332 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL++ N K ++A L+++M E GF + Y +L + +GQ ++L+++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ D V Y++ + + A F E++ D I Y+TL +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L++M KR + VA+S+L+ + G E + K+M+ + YT +
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K + +KA ++ D S + R NIL+ Y N ++ + ++ +G+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ L G+ + G++E E F++ + R+ PD + L + G+ + A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVS--RRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 346 EHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
+ + ++ + IYN ++ A K+
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ ++ +++ ++ G+L + ++ +E +++ SPD VTY + +N + A
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ P+ +++ L + Y K L + ++M R + V Y++L+ + +G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ ++++M+S + + Y ++ L GE EKA I+++ E D + NI
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++ N ++++ A + L KG+KP T+ ++ G KKG + + F+K
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/359 (18%), Positives = 142/359 (39%), Gaps = 39/359 (10%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNT 110
L S + + K +A L ++M+ + ++ + ++ Q D V + ++++ K
Sbjct: 44 LRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI 103
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI-------KME 163
+ ++ T ++ + C A A ++ K +PD +++STL + +E
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 164 LPEK----------------------------AATTLKEMEKRTCRKNRVAYSSLLSLYT 195
L ++ A + M + + N V Y +L +
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G + + +KM K++ +Y+ +I L K G + A N+++E E D
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+ L+ + + + ++ + I P + L ++K+G++ + E K+
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
I R PD T+ + ++ +D A H+L + + G + +N L+ Y KA
Sbjct: 344 IQ--RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 38/260 (14%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD SAL+ +V+ K EAE L ++M + G + Y +++ + QLDK M
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 103 LQEL-KKNTSP-----------------------------------DVVTYNLWLAACAS 126
L + K P D VTYN +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E A++ F E+ ++ PD +SY L PEKA +++EK +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+ ++ N D+ ++ + K + Y +I L K G +A+ ++ + E
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 247 SISGTGDPRVPNILLAAYIN 266
+ + NIL+ A++
Sbjct: 555 EDGHSPNGCTYNILIRAHLG 574
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 27/205 (13%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F +LP K PD T + ++ + +EA+ L KM E G YN ++ +
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 91 ISNGQLDKVPQMLQELKK-----------------------NTSPDVVTYNLWLAA-CAS 126
+ G K ++++E+K+ PDV T+ L C
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLE 632
Query: 127 QNDKE-TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+N A F +K P+ ++Y+T+ + + + L +M +R C+ N V
Sbjct: 633 ENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAV 692
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKM 210
S+ +S + + +KM
Sbjct: 693 TKSTFISGLCKQDLHGSAILLLRKM 717
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 154/371 (41%), Gaps = 39/371 (10%)
Query: 43 RGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-------- 94
R DT + S +A + +EKM E GF+ YN +++ + +G
Sbjct: 157 RNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEV 216
Query: 95 ---------------------------QLDKVPQMLQELKK-NTSPDVVTYNLWLAACAS 126
+ V +L+E++ P++ TY + +
Sbjct: 217 YRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGR 276
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ A + + PD ++Y+ L + A +M+ + + ++V
Sbjct: 277 DGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVT 336
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y +LL +++ G+ D+V +IW +M + + +T ++++L K G +A ++ D
Sbjct: 337 YVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR 396
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ N L++ + N+L+ A ++ + + G++P T+ LL + K G
Sbjct: 397 KQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPG 456
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNS 365
K LE F+K R P+ A+ L E G + A+ + L+++G + YN
Sbjct: 457 KALETFEKM--KARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNM 514
Query: 366 LLRTYAKAGKM 376
+++ Y+K G++
Sbjct: 515 MMKCYSKVGQV 525
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 148/333 (44%), Gaps = 16/333 (4%)
Query: 23 AQALQTRARENFFENLPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
AL R N +L D MR P+ T + L+ ++ + +A L M G
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEK 135
Y +++ + +G K + +++K + +P++V N L + A A+
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKA 495
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F ELK + + PD ++Y+ + Y K+ ++A L EM K C + + +SL+
Sbjct: 496 MFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLY 555
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG--- 252
G +E +++ +M + Y +++ L K G+ +KA ++ ES++G G
Sbjct: 556 KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF---ESMNGHGCSP 612
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ N LL +++++A + ++ T +P T+ + G++K+ Q++ + F
Sbjct: 613 NTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ +R PDH + + + G I+ A
Sbjct: 673 HQMKKLLR---PDHVTLCTLLPGVIKSGQIEDA 702
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 5/227 (2%)
Query: 132 TAEKAFLEL-KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A F++ K+ + P Y+ L ++++ E A +EM+ C + Y+SL
Sbjct: 772 VARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSL 831
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + G +E+ ++ +M++ K N Y VIS+LVK +KA ++Y S
Sbjct: 832 IDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF 891
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ P L+ + +L+ A ++ +V G +P + +L GY K G ++ E
Sbjct: 892 SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACE 951
Query: 311 CFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
FK+ + +R PD + T + L G +D A H L+ AG
Sbjct: 952 FFKRMVKEGIR---PDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 164/396 (41%), Gaps = 52/396 (13%)
Query: 23 AQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+AL+T FE + + P+ C+A L+S + + EA+A+ ++ G
Sbjct: 456 GKALET------FEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN M+ Y GQ+D+ ++L E+ K PDV+ N + E A + F
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+++ + P ++Y+ L + K +KA + M C N + +++LL
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D L+++ KM ++ + + + +I +K + + A ++ + + + D
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLL-RPDHVTLCT 688
Query: 260 LLAAYINRNQLE----MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
LL I Q+E + E F+ ++ G + WE + G L + EK + ++
Sbjct: 689 LLPGVIKSGQIEDAFRITEDFFYQV---GSNIDRSFWEDVMGGILTEAGTEKAILFGERL 745
Query: 316 IG-----------SVRKWVPDHRLITAAYNKL----EEQGD----------IDG------ 344
+ + K + H+ + A N +E G IDG
Sbjct: 746 VCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHN 805
Query: 345 ---AEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
A +L +++AG T YNSL+ + K+GK+
Sbjct: 806 VEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 132/308 (42%), Gaps = 7/308 (2%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
+ A +++ A L T+ + + + PDK+ T LL + + E + +
Sbjct: 306 IDALCTARKLDDAMCLFTKMKSS--SHKPDKV----TYVTLLDKFSDCGHLDKVEKIWTE 359
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQND 129
M G+ + + ++N G++++ +L ++K P++ TYN ++ N
Sbjct: 360 MEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANR 419
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
+ A F ++ ++P +Y L + K P KA T ++M+ R N VA ++
Sbjct: 420 LDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNA 479
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L MG E ++ ++ S + Y ++ K+G+ ++A + E +
Sbjct: 480 SLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ 539
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D V N L+ ++E A + R+ + P T+ +L G K+GQ++K +
Sbjct: 540 CEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAV 599
Query: 310 ECFKKAIG 317
+ F+ G
Sbjct: 600 QLFESMNG 607
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 3/264 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + YNL + ++ E A F E+K PD +Y++L + K +
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
EM R C+ N + Y+ ++S D+ + ++ ++S + +I L+K
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G + A ++D + + NIL+ Y ++ A F+ R+V +GI+P +
Sbjct: 908 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKS 967
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ +L G+++ L F+K PD N L + A L
Sbjct: 968 YTILVDILCIAGRVDDALHYFEKL--KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025
Query: 352 LRNAGHV-STEIYNSLLRTYAKAG 374
++N G V YNSL+ G
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVG 1049
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 107/258 (41%), Gaps = 1/258 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L+ +++ A L E+M G YN +++ + +G+++++ + E L +
Sbjct: 796 LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG 855
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ +TYN+ ++ N + A + L P ++ L +K + A
Sbjct: 856 CKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAH 915
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
M CR N Y+ L++ Y +G+ D +K+M+ + + YT ++ L
Sbjct: 916 EMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G + A + +++ + D N+++ + E A S ++ + +GI P
Sbjct: 976 CIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDL 1035
Query: 290 TTWELLTWGYLKKGQMEK 307
T+ L G +E+
Sbjct: 1036 YTYNSLILNLGIVGMIEE 1053
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Query: 37 NLPDKM--RG--PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+L D+M RG P+T + ++ + V++ + +A L + F P + +++
Sbjct: 846 DLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +G+LD +M + P+ YN+ + +TA + F + K I PD
Sbjct: 906 LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
SY+ L + + A +++++ + VAY+ +++ +E L ++ +
Sbjct: 966 KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + + Y +I +L +G E+A IY+E + I + N L+ Y
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGN 1085
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELL 295
E+A Y +++ G P T+ L
Sbjct: 1086 SELAYGIYKKMMVGGCDPNTGTFAQL 1111
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 26/236 (11%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAE-AEALMEKMSECGFLKCPLPYNHMLNLY 90
E FF+++P M + LL SY +++ + + AEA EKM E GFL P P+N M++LY
Sbjct: 123 EKFFKSIPKNMTDYFVYATLLSSYTKSENTLDKAEATFEKMRELGFLLKPSPFNSMISLY 182
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+LD V ++++E+++ D T N L A +T + +E KT +D
Sbjct: 183 GQLQKLDMVEKLVREMQETKVECDSPTVNNVLRVYA-----DTCKIKAMETFKTWVDEQG 237
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM-GYKDEVLRIWK 208
I K+E T+ M K R + + + +Y N+ G + EV R+W
Sbjct: 238 I----------KLE-----GGTIVAMAKAYLRSGSIEKA--IEMYGNVAGSEKEVYRLWD 280
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
+ K+ND Y V+SSL+KL + AE IY+EW+ D +P++LL+ Y
Sbjct: 281 EYKKE-TKVNDNGYRTVLSSLLKLDNVQGAEKIYEEWKPEGPKLDMSIPSLLLSRY 335
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 5/298 (1%)
Query: 13 AQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEK 70
++ R+++A + +FF ++ P T + ++ + A +L E+
Sbjct: 100 CNAFLHRLSKAG--EGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQ 157
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQND 129
M + G + YN +++ Y G LD+ + +E+K PDV+TYN + +
Sbjct: 158 MKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKG 217
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A + F E+K + P+ ISYSTL K + + A +M + N YSS
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSS 277
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L+ G E + +M+ +N YT ++ L + G +AE ++
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
T + + L+ +I ++ A +N + K IKP W + WG + ++E+
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEE 395
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 8/352 (2%)
Query: 25 ALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
A Q R F LP K R +C+A LH + + + M G YN
Sbjct: 81 AGQCFLRMTKFRVLP-KAR---SCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYN 136
Query: 85 HMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
M+ G + + +++KK +PD+VTYN + + + F E+K
Sbjct: 137 IMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFM 196
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+PD I+Y+ L + + K + +A +EM+ + + N ++YS+L+ G
Sbjct: 197 GCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMA 256
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
++ + M + N+ Y+ +I + K G +A + DE + LL
Sbjct: 257 IKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDG 316
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
+ AE + + G+ P + L G++K M+K +E F + +
Sbjct: 317 LCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEM--REKDIK 374
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
PD L L + ++ + ++ ++ +G + IY +L+ Y KAG
Sbjct: 375 PDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 129/303 (42%), Gaps = 3/303 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + EAE L M + G Y +++ +I +DK ++ E+
Sbjct: 309 TYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEM 368
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K+ PD++ + + S++ E + E+K++ I + + Y+TL Y K
Sbjct: 369 REKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNR 428
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L+EM V + +L+ G E + + +M + N A YT +
Sbjct: 429 TEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTAL 488
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K A+ ++DE + + D ++ + + A + N+++ GI
Sbjct: 489 IDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGI 548
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + L WG + GQ+++ + + IG + +PD L T K E G+ID A
Sbjct: 549 ELDLYAYTSLVWGLSQCGQVQQARKFLAEMIG--KGIIPDETLCTRLLRKHYELGNIDEA 606
Query: 346 EHL 348
L
Sbjct: 607 IEL 609
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 1/227 (0%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYN 118
K E + +M +M E G P+ Y +++ Y G + +L+E++ T VVT+
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFC 451
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + + A F + + P+ Y+ L K A EM+ +
Sbjct: 452 ALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDK 511
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
+++AY++++ G E L + KMM + +++ YT ++ L + G+ ++A
Sbjct: 512 NMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQA 571
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
E D + LL + ++ A N LV KG+
Sbjct: 572 RKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 125/298 (41%), Gaps = 8/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQ-MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
++ + ++ + G L+ Q L+ K P + N +L + + + + F ++
Sbjct: 65 FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMV 124
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
I P +Y+ + K A + ++M+K + V Y++L+ Y +G D
Sbjct: 125 GAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLD 184
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E + ++++M + + + Y +I+S K +A + E + + + L+
Sbjct: 185 ESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLI 244
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
A ++MA F+ + G+ P T+ L K G + E F A +++
Sbjct: 245 DALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLG---EAFMLADEMLQE 301
Query: 322 WVPDHRLI--TAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
V D ++ T + L E+G ++ AE L + AG + + Y +L+ + K M
Sbjct: 302 HV-DLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 76/411 (18%), Positives = 163/411 (39%), Gaps = 63/411 (15%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHML 87
+ FE + PD T + L+ Y + E+ L E+M F+ C + YN ++
Sbjct: 153 SLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMK---FMGCEPDVITYNALI 209
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT--- 143
N + + + + +E+K K+ P+V++Y+ + A + + A K F+++ +
Sbjct: 210 NSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLL 269
Query: 144 --------------------------------KIDPDWISYSTLTSLYIKMELPEKAATT 171
+D + ++Y+TL + + +A
Sbjct: 270 PNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEEL 329
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ M K N AY++L+ + + D+ + ++ +M K + + ++ L
Sbjct: 330 FRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCS 389
Query: 232 LGEFEKAENIYDEWESISGTG-DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
+ E+ + I E + SG G +P + L+ AY A + + G +
Sbjct: 390 ESKLEECKIIMTEMKE-SGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL------ITAAYNKLEEQGDIDG 344
T+ L G K+G +++ + F + +PDH L TA + L + I
Sbjct: 449 TFCALIDGLCKRGLVQEAIYYFGR--------MPDHDLQPNVAVYTALIDGLCKNNCIGD 500
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
A+ L +++ + +I Y +++ K G L + +M + +++D
Sbjct: 501 AKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELD 551
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
K AEAE +M G L + Y +++ + G + + E+ ++ +PDV+TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
++ D A K F E+ ++PD ++++ L + Y K + A M +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C N V Y++L+ G D + +M + + N Y +++ L K G E+A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E+E+ D L+ AY +++ A+ ++ KG++P T+ +L G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 299 YLKKGQME 306
+ G +E
Sbjct: 571 FCLHGMLE 578
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 5/293 (1%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
RA FF + + PD T +A++ + Q EA L +M G + + +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 87 LNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+N Y G + D ++ SP+VVTY + + D ++A + E+ K +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P+ +Y+++ + K E+A + E E + V Y++L+ Y G D+
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAY 264
I K+M+ + + +++ G E E + + W G + N L+ Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIAPNATTFNSLVKQY 606
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
RN L+ A + Y + ++G+ P T+E L G+ K M++ F++ G
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 133/358 (37%), Gaps = 39/358 (10%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-- 108
++H Q + EA L+ M G+ + Y+ ++N Y G+LDKV ++++ +K+
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 109 ----------------------------------NTSPDVVTYNLWLAACASQNDKETAE 134
PD V Y + + D A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
K F E+ I PD ++Y+ + S + ++ +A EM + + V ++ L++ Y
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G+ + R+ M+ N YT +I L K G+ + A + E I +
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N ++ +E A G+ T+ L Y K G+M+K E K+
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYA 371
+G + P N G ++ E LL + G + +NSL++ Y
Sbjct: 552 MLG--KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 141/336 (41%), Gaps = 9/336 (2%)
Query: 46 DTCSALLHSYVQN-KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
D+C+ L ++ K+A A + + E G YN +++ G++ + +L
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 105 ELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
++ K +PDV++Y+ + + + K +K+ + P+ Y ++ L ++
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A EM ++ + V Y++L+ + G + + +M S + YT
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+IS ++G+ +A ++ E D L+ Y ++ A +N ++
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRKWVPDHRLITAAYNKLEEQGD 341
G P T+ L G K+G ++ E + IG P+ + N L + G+
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG----LQPNIFTYNSIVNGLCKSGN 506
Query: 342 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
I+ A L+ AG + T Y +L+ Y K+G+M
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 3/273 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L++ Y + +A + M + G + Y +++ G LD ++
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E+ K P++ TYN + + E A K E + ++ D ++Y+TL Y K
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+KA LKEM + + V ++ L++ + G ++ ++ M++ N
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ + A IY + S D + L+ + ++ A + +
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KG +T+ +L G+LK+ + + E F +
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 148/344 (43%), Gaps = 39/344 (11%)
Query: 70 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQN 128
KM E GF YN +++L + +G + +M + + + P + T++ + A +
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243
Query: 129 DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYS 188
D ET + E++ + P+ +Y+ + + ++A +K ME C + V Y+
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYT 303
Query: 189 SLLSLYTNMGYKDEVLRIWKKM------------MSLFAKMNDA---------------- 220
L+ G D+ + ++ KM +++ K +D
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363
Query: 221 -------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
+T ++++L K G ++A ++ D + N L++ + N+L+ A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
+N + T G+ P T+ L Y K G+ +K LE F+K +R P+ A+
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKM--KIRGIAPNIVACNASL 481
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L E G + A+ + L++ G + YN +++ Y+KAG++
Sbjct: 482 YSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQV 525
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 8/273 (2%)
Query: 132 TAEKAFLEL-KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A+ F+ K+ + P SY+ L ++ + E A EM+ C + Y+ L
Sbjct: 772 VAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLL 831
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
L + G +E+ ++++M+ K N + +I++LVK +KA +++ + S
Sbjct: 832 LDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDF 891
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ P LL + +LE A+ + +V G +P + +L G+ K G + E
Sbjct: 892 SPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE 951
Query: 311 CFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
FK+ VR+ + PD + T+ L E G +D A H L+ G ++ + YN ++
Sbjct: 952 LFKRM---VREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMID 1008
Query: 369 TYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
++ ++ L + + MQ + D T L
Sbjct: 1009 GLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 13/278 (4%)
Query: 41 KMRG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
K+RG P+ C+A L+S + + EA+ + ++ G + YN M+ Y GQ+
Sbjct: 466 KIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQV 525
Query: 97 DKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
D+ ++L ++ +N PD++ N + + A K F LK K+ P ++Y+TL
Sbjct: 526 DEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTL 585
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+ K ++A M C N + ++++L D L++ KM ++
Sbjct: 586 IAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNC 645
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE---- 271
+ + +I LV A ++ + + + T D LL + +E
Sbjct: 646 MPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKML-TPDCVTLCTLLPGVVKNGLMEDAFK 704
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+AE F +RL G+ WE L G L + EK +
Sbjct: 705 IAEDFVHRL---GVYVDRRFWEDLMGGILTQAGTEKTI 739
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
L+ ++ A L +M G YN +L+ + +G+++++ ++ +++ +
Sbjct: 796 LIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSS 855
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ +T+N+ +A N + A F +L P +Y L +K E+A
Sbjct: 856 CKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAK 915
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+EM CR N Y+ L++ + G + ++K+M+ + + YT ++ L
Sbjct: 916 ELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCL 975
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G + A + +++ + D N+++ +++E A + Y+ + ++GI P
Sbjct: 976 CEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDL 1035
Query: 290 TTWELLTWGYLKKGQMEK 307
T+ L G +E+
Sbjct: 1036 FTYNSLILNLGVAGMVEQ 1053
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 131/346 (37%), Gaps = 46/346 (13%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALM 68
+R R+ +A + R + D GPD T + L+ + K +A L
Sbjct: 271 IRVLGRAGRIDEACRIMKR--------MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELF 322
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQ 127
KM + Y ML+ + G L +V + E++ + +PDV+T+ + + A
Sbjct: 323 VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKA 382
Query: 128 NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
+ + A ++K + P+ +Y+TL S +++ + A ME Y
Sbjct: 383 GNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTY 442
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+ Y G D+ L ++KM N + SL ++G +A+ I++ +S
Sbjct: 443 ILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKS 502
Query: 248 ISGTGDPRVPNILLAAY---------------INRNQLE----MAESFYNRLVTKG---- 284
D N+++ Y ++ NQ E + S N L G
Sbjct: 503 NGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDE 562
Query: 285 ------------IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+ P T+ L G K+GQ+++ +E F G+
Sbjct: 563 AWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGN 608
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + +YN + ++ E A F E+K PD +Y+ L + K +
Sbjct: 788 PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
++M +C+ N + ++ +++ D+ L ++ ++S Y ++ L+K
Sbjct: 848 YEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLK 907
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G E+A+ +++E + + NIL+ + + A + R+V +GI+P +
Sbjct: 908 SGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKS 967
Query: 292 WELLTWGYLKKGQMEKVLECFKK 314
+ L + G+++ L F+K
Sbjct: 968 YTSLVGCLCEAGRVDDALHYFEK 990
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 107/250 (42%), Gaps = 1/250 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ + V++ +A L + F P Y +L+ + +G+L++ ++ +E+
Sbjct: 862 THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+ YN+ + D TA + F + + I PD SY++L +
Sbjct: 922 VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A +++++ + +AY+ ++ +E L ++ +M S + Y +
Sbjct: 982 DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I +L G E+A +Y+E + I + N L+ Y + A + Y R++ G
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101
Query: 286 KPCYTTWELL 295
P T+ L
Sbjct: 1102 SPNTGTFAQL 1111
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 149/331 (45%), Gaps = 4/331 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ + + EA KM + G + YN ++N + ++ + +L+E+K+
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +P+VVTY+ + Q +TA K F ++ + P+ ++Y+TL S + L ++
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 249
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM +R + ++ +Y +L++ G D L++++ + + Y+ +I+
Sbjct: 250 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 309
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L K G ++A ++++ S D L+ ++L+ A+ + + P
Sbjct: 310 GLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G K GQ+ E FK+ I VR P+ + + +D A
Sbjct: 370 NVITYSSLIDGLCKTGQVRDAQEVFKRMI--VRGIEPNVVTYNSLIHGFCMTNGVDSALL 427
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP 377
L+ + G + I YN+L+ K G+ P
Sbjct: 428 LMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 150/356 (42%), Gaps = 7/356 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
S L+ + + EA L EKM E + + +++ +L + Q+L+ ++
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+N +P+V+TY+ + A++ F + I+P+ ++Y++L + +
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A ++EM C + + Y++L+ G E R++ M + F + Y+C+I
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
KL + A ++D+ + D + L+ Y N ++ AE +V P
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G+ K G+M + K+ + R P+ TA + G A
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRM--AKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKD-NVQMDAETQKVL 399
LL + G I Y SL+ + G + I+ER+++D N + D +V+
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVM 658
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 146/358 (40%), Gaps = 8/358 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + LL +N EA L+++M E G Y+ ++ G++D ++ ++
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PDVV Y+ +A + A K F ++++ +PD ++++ L K +
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+ ME R C N + YSSL+ G + ++K+M+ + N Y +
Sbjct: 353 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + A + +E + D N L+ + A + + K
Sbjct: 413 IHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 472
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ K +++ F + + +PD + G +D A
Sbjct: 473 NPDVITYSCLIGGFCKLERIDMARTLFDDMLK--QAVLPDVVTFSTLVEGYCNAGLVDDA 530
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
E LL + A S ++ Y SL+ + K G+M +++RM K Q + T L
Sbjct: 531 ERLLEEMV-ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 587
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 129/279 (46%), Gaps = 3/279 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+F + K P+ T + L++ + + K A L+++M E G + Y+ +++ +
Sbjct: 148 YFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFC 207
Query: 92 SNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++D ++ +++ +N P++VTYN L+ + A + E+++ + PD
Sbjct: 208 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 267
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY TL + K + A ++ C + VAYS+L++ G DE ++++KM
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + +T ++ L K ++A+ + + E + T + + L+ Q+
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
A+ + R++ +GI+P T+ L G+ ++ L
Sbjct: 388 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 140/339 (41%), Gaps = 21/339 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI--------SNGQLDK 98
T + ++ ++ +A L+E+M E G P+P + N I + LD
Sbjct: 61 TYAVVIQGLCKSGDLDKACELLEEMRESG----PVPDAAIYNFVIHALCKARNTAKALDY 116
Query: 99 VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
M E +KN V+T+ + + N A F ++KK P+ +Y+ L +
Sbjct: 117 FRSM--ECEKN----VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLING 170
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ K+ +A LKEM++ N V YS+++ + D +++++M+ N
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y ++S L + G ++A + DE D + L+A +++MA +
Sbjct: 231 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 290
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
P + L G K G++++ + F+K PD TA + L +
Sbjct: 291 DNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM--RENSCEPDVVTFTALMDGLCK 348
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ A+ +L T+ + I Y+SL+ K G++
Sbjct: 349 GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 131/327 (40%), Gaps = 21/327 (6%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN + + ++D+ +L+ +P+V TY + + D + A + E++
Sbjct: 27 YNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMR 86
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
++ PD Y+ + K KA + ME C KN + ++ ++
Sbjct: 87 ESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKANRLP 143
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-- 259
E + KM N+ Y +I+ K+ + +A + E + SG PN+
Sbjct: 144 EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE-SGLA----PNVVT 198
Query: 260 ---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ + + +++ A + ++V G P T+ L G + G M++ E +
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM- 257
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
R PD L + G ID A + N G ++ Y++L+ KAG
Sbjct: 258 -RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN-GDCPPDVVAYSTLIAGLCKAG 315
Query: 375 KM--PLIIVERMQKDNVQMDAETQKVL 399
++ + E+M++++ + D T L
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTAL 342
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 149/331 (45%), Gaps = 4/331 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ + + EA KM + G + YN ++N + ++ + +L+E+K+
Sbjct: 11 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 70
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +P+VVTY+ + Q +TA K F ++ + P+ ++Y+TL S + L ++
Sbjct: 71 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 130
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM +R + ++ +Y +L++ G D L++++ + + Y+ +I+
Sbjct: 131 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 190
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L K G ++A ++++ S D L+ ++L+ A+ + + P
Sbjct: 191 GLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 250
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G K GQ+ E FK+ I VR P+ + + +D A
Sbjct: 251 NVITYSSLIDGLCKTGQVRDAQEVFKRMI--VRGIEPNVVTYNSLIHGFCMTNGVDSALL 308
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP 377
L+ + G + I YN+L+ K G+ P
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 150/356 (42%), Gaps = 7/356 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
S L+ + + EA L EKM E + + +++ +L + Q+L+ ++
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+N +P+V+TY+ + A++ F + I+P+ ++Y++L + +
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A ++EM C + + Y++L+ G E R++ M + F + Y+C+I
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
KL + A ++D+ + D + L+ Y N ++ AE +V P
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G+ K G+M + K+ + R P+ TA + G A
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRM--AKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKD-NVQMDAETQKVL 399
LL + G I Y SL+ + G + ++ER+++D N + D +V+
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVM 539
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 145/356 (40%), Gaps = 8/356 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ LL +N EA L+++M E G Y+ ++ G++D ++ ++
Sbjct: 116 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 175
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ PDVV Y+ +A + A K F ++++ +PD ++++ L K + ++
Sbjct: 176 GDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 235
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+ ME R C N + YSSL+ G + ++K+M+ + N Y +I
Sbjct: 236 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 295
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ A + +E + D N L+ + A + + K P
Sbjct: 296 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 355
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G+ K +++ F + + +PD + G +D AE
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLK--QAVLPDVVTFSTLVEGYCNAGLVDDAER 413
Query: 348 LLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
LL + A S ++ Y SL+ + K G+M +++RM K Q + T L
Sbjct: 414 LLEEMV-ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 468
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 129/279 (46%), Gaps = 3/279 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+F + K P+ T + L++ + + K A L+++M E G + Y+ +++ +
Sbjct: 29 YFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFC 88
Query: 92 SNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
++D ++ +++ +N P++VTYN L+ + A + E+++ + PD
Sbjct: 89 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 148
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY TL + K + A ++ C + VAYS+L++ G DE ++++KM
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + +T ++ L K ++A+ + + E + T + + L+ Q+
Sbjct: 209 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 268
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
A+ + R++ +GI+P T+ L G+ ++ L
Sbjct: 269 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 112/265 (42%), Gaps = 3/265 (1%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
+V+T+ + + N A F ++KK P+ +Y+ L + + K+ +A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
KEM++ N V YS+++ + D +++++M+ N Y ++S L +
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
G ++A + DE D + L+A +++MA + P +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 293 ELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
L G K G++++ + F+K PD TA + L + + A+ +L T+
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKM--RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Query: 353 RNAGHVSTEI-YNSLLRTYAKAGKM 376
+ I Y+SL+ K G++
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQV 268
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 144/300 (48%), Gaps = 10/300 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ + + GQ +KV ++ E+ + + PD +TY+ +++ ++A + F E+
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K + P Y+TL +Y K+ EKA +EM++ C Y+ L+ G
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-- 258
+E ++K M++ + +++ L K+G E+ N+++E + T P V +
Sbjct: 320 EEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCT--PTVVSYN 377
Query: 259 -ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
++ A + ++ + S+++++ G+ P T+ +L GY K ++EK L ++
Sbjct: 378 TVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEM-- 435
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + N L + + A L L+ N G+VS+ +Y +++ + K GK+
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 117/275 (42%), Gaps = 9/275 (3%)
Query: 48 CSALLHSYVQNKKS-------AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
CS +++Y + K EA L + M G + N+++N+ G+L+++
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELT 358
Query: 101 QMLQELKK-NTSPDVVTYNLWLAAC-ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ E+ +P VV+YN + A S+ F ++K + P +YS L
Sbjct: 359 NVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDG 418
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y K EKA L+EM+++ AY SL++ + ++K++ F ++
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y +I K G+ +A ++++E ++ D N L++ + + A S
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLR 538
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
++ G + ++ G+ + G + +E F+
Sbjct: 539 KMEENGCTADINSHNIILNGFARTGVPRRAIEMFE 573
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ Y + + +A L+E+M E GF CP Y ++N + + ++ +EL
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N + Y + + A F E+K PD +Y+ L S +K +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMV 530
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + L++ME+ C + +++ +L+ + G + +++ M K + Y +
Sbjct: 531 NEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTL 590
Query: 226 ISSLVKLGEFEKAENIYDE 244
+ G FE+A + E
Sbjct: 591 LGCFAHAGMFEEAARLMRE 609
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
+ A +R A L +ENF N+ ++ + ++ + + K +EA L +
Sbjct: 451 INALGKAKRYEAANELFKELKENF-GNVSSRVY-----AVMIKHFGKCGKLSEAVDLFNE 504
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQND 129
M G YN +++ + G +++ +L+++++N + D+ ++N+ L A
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGV 564
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A + F +K I PD ++Y+TL + + E+AA ++EM+ + + + YSS
Sbjct: 565 PRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSS 624
Query: 190 LLSLYTNMGY-KDEV 203
+L NM + KD+V
Sbjct: 625 ILDAVGNMDHEKDDV 639
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 13/257 (5%)
Query: 60 KSAEAEALMEKMSECGFLKCP---LPYNHMLN-LYISNGQLDKVPQMLQELKKN-TSPDV 114
K E L +E G +C + YN ++ L+ S + +V ++K + SP
Sbjct: 350 KVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSE 409
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
TY++ + N E A E+ + P +Y +L + K + E A KE
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
+++ + Y+ ++ + G E + ++ +M + + + Y ++S +VK G
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAY----INRNQLEMAESFYNRLVTKGIKPCYT 290
+A ++ + E T D NI+L + + R +EM E+ + GIKP
Sbjct: 530 VNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKH----CGIKPDGV 585
Query: 291 TWELLTWGYLKKGQMEK 307
T+ L + G E+
Sbjct: 586 TYNTLLGCFAHAGMFEE 602
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 3/205 (1%)
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++ T + + S L + ++ KA + + + R C+ Y+S++ + G
Sbjct: 153 VRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQ 212
Query: 200 KDEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
++V ++ +M + D Y+ +ISS KLG + A ++DE + ++
Sbjct: 213 HEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYT 272
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LL Y ++E A + + G P T+ L G K G++E+ + +K +
Sbjct: 273 TLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNML-- 330
Query: 319 VRKWVPDHRLITAAYNKLEEQGDID 343
PD + N L + G ++
Sbjct: 331 TDGLTPDVVFLNNLMNILGKVGRLE 355
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/226 (18%), Positives = 88/226 (38%), Gaps = 1/226 (0%)
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLW 120
+E + +KM G Y+ +++ Y +++K +L+E+ +K P Y
Sbjct: 391 SEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ A E A + F ELK+ + Y+ + + K +A EM+ +
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ AY++L+S G +E + +KM + + +++ + G +A
Sbjct: 511 GPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIE 570
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+++ + D N LL + + E A + KG +
Sbjct: 571 MFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFE 616
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 158/375 (42%), Gaps = 38/375 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+Y ++ K A L +KM G + YN ML++Y G+ ++ ++L E++
Sbjct: 220 TTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMR 279
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K D T + ++AC + + A K ELK P + Y+++ ++ K +
Sbjct: 280 SKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYT 339
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + LKEME C + + Y+ L + Y G+ DE + + M S N YT VI
Sbjct: 340 EALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVI 399
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ K G + A ++ + + + + N +LA +++ E + G
Sbjct: 400 DAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA 459
Query: 287 PCYTTWELLTWGYLKKGQ---MEKVL------------ECFKKAIGSVRK---------- 321
P TW + ++G+ + KVL + F I S +
Sbjct: 460 PNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKM 519
Query: 322 --------WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ P A N L +GD AE ++ ++ G E Y+ LL Y+K
Sbjct: 520 YGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSK 579
Query: 373 AGKMPLIIVERMQKD 387
AG + I E+++K+
Sbjct: 580 AGNVRGI--EKVEKE 592
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 13/266 (4%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK DT + L+ SY + ++ + +M + GF C YN +LN G
Sbjct: 495 PDK----DTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKA 550
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++Q+++ K P+ +Y+L L + + EK E+ ++ P WI TL
Sbjct: 551 AESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVL 610
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K +++K + + V +S+LS+++ ++++ ++M+ +
Sbjct: 611 SNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFS----RNKMFSKAREMLHFIHEC 666
Query: 218 ----NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
N Y C++ V+ E KAE + ++ D N ++ + + ++ A
Sbjct: 667 GLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEA 726
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGY 299
+ + TKGI+P T+ GY
Sbjct: 727 IRVLSEMTTKGIQPTIVTYNTFLSGY 752
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ML+++ N K +ML + + P++ TYN + +++ AE+ ++
Sbjct: 641 NSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQN 700
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ +PD +SY+T+ + + L ++A L EM + + V Y++ LS Y M DE
Sbjct: 701 SVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDE 760
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
+ + M+ + ++ Y ++ K G+ E+A + + + I + D +
Sbjct: 761 ANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDISFDDK 813
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 9/246 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ +Y + + +A L KM + G YN +L + + + V ++L E+
Sbjct: 394 TYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 453
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N +P+ T+N LA C+ + K E+K +PD +++TL S Y +
Sbjct: 454 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSE 513
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM K Y++LL+ + G + + M + K N+ Y+ +
Sbjct: 514 VDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLL 573
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN----QLEMAESFYNRLV 281
+ K G E + E E G P ILL + N L E +++L
Sbjct: 574 LHCYSKAGNVRGIEKV--EKEIYDGQVFPSW--ILLRTLVLSNHKCRHLRGMERAFDQLQ 629
Query: 282 TKGIKP 287
G KP
Sbjct: 630 KYGYKP 635
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 81/224 (36%), Gaps = 48/224 (21%)
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A K F + K D +Y+T+ Y + ++A +ME V Y+ +L
Sbjct: 200 ASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLD 259
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDA-----EYTC--VISS----------------- 228
+Y MG R W +++ L +M E+TC VIS+
Sbjct: 260 VYGKMG------RSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAEL 313
Query: 229 ------------------LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
K G + +A +I E E + D N L A Y+ L
Sbjct: 314 KLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFL 373
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ + + + +KG+ P T+ + Y K G+ + L F K
Sbjct: 374 DEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSK 417
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 147/332 (44%), Gaps = 4/332 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL++ N K ++A L+++M E GF + Y +L + +GQ ++L+++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ D V Y++ + + A F E++ D I Y+TL +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L++M KR + VA+S+L+ + G E + K+M+ + YT +
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K + +KA ++ D S + R NIL+ Y N ++ + ++ +G+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ L G+ + G++E E F++ + R+ PD + L + G+ + A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVS--RRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 346 EHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
+ + ++ + IYN ++ A K+
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ ++ +++ ++ G+L + ++ +E +++ SPD VTY + +N + A
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ P+ +++ L + Y K L + ++M R + V Y++L+ + +G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ ++++M+S + + Y ++ L GE EKA I+++ E D + NI
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++ N ++++ A + L KG+KP T+ ++ G KKG + + F+K
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/359 (18%), Positives = 142/359 (39%), Gaps = 39/359 (10%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNT 110
L S + + K +A L ++M+ + ++ + ++ Q D V + ++++ K
Sbjct: 44 LRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI 103
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI-------KME 163
+ ++ T ++ + C A A ++ K +PD +++STL + +E
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 164 LPEK----------------------------AATTLKEMEKRTCRKNRVAYSSLLSLYT 195
L ++ A + M + + N V Y +L +
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G + + +KM K++ +Y+ +I L K G + A N+++E E D
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+ L+ + + + ++ + I P + L ++K+G++ + E K+
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
I R PD T+ + ++ +D A H+L + + G + +N L+ Y KA
Sbjct: 344 IQ--RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 38/260 (14%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD SAL+ +V+ K EAE L ++M + G + Y +++ + QLDK M
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 103 LQEL-KKNTSP-----------------------------------DVVTYNLWLAACAS 126
L + K P D VTYN +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E A++ F E+ ++ PD +SY L PEKA +++EK +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+ ++ N D+ ++ + K + Y +I L K G +A+ ++ + E
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 247 SISGTGDPRVPNILLAAYIN 266
+ + NIL+ A++
Sbjct: 555 EDGHSPNGCTYNILIRAHLG 574
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 6/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + + GQ +KV Q+ E+ + + PD VTY+ ++A +++A + E+
Sbjct: 1187 YNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEM 1246
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+ L +L+ K A + +EM + CR + Y+ L+ G
Sbjct: 1247 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 1306
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-I 259
DE + +M + + +I+ L K G + A ++ E E++ N I
Sbjct: 1307 DEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTI 1366
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ A + ++++ S++ R+ GI P T+ +L G+ K +MEK + ++
Sbjct: 1367 IKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM--DE 1424
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + + L + D A L L+ N G S +Y +++ KAG++
Sbjct: 1425 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 1482
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 118/292 (40%), Gaps = 5/292 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE-LK 141
N+M+N G+LD ++ QE++ P VVTYN + A + + ++ E +K
Sbjct: 1329 NNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMK 1388
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
++ I P +YS L + K EKA L+EM+++ AY SL+ D
Sbjct: 1389 ESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 1448
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++++ + Y +I L K G + A N++DE + D N L+
Sbjct: 1449 LACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALM 1508
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ L+ A S R+ G P ++ ++ G K G + +E S +
Sbjct: 1509 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR 1568
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
PD L G + A L+ + G I Y+S+L K
Sbjct: 1569 --PDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 40/246 (16%)
Query: 27 QTRARE--NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
++RA E ++FE + + P T S L+ + + + +A L+E+M E GF CP
Sbjct: 1374 KSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 1433
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-------------------------------- 110
Y +++ + D ++ QELK+N
Sbjct: 1434 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 1493
Query: 111 ----SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+PDV YN ++ A + A +++ PD SY+ + + K P
Sbjct: 1494 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 1553
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L M++ T R + V+Y+++L ++ G +E ++ K+M +L + + Y+ ++
Sbjct: 1554 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSIL 1613
Query: 227 SSLVKL 232
++ K+
Sbjct: 1614 EAIGKV 1619
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 9/239 (3%)
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND-AEYTCV 225
+A T +++ R C+ AY+S++ + + G ++V +++ +M + D Y+ +
Sbjct: 1167 QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSAL 1226
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ KLG + A + +E + I ++ +L+A + N A S + + +
Sbjct: 1227 ISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYC 1286
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P T+ L G K G++++ F + PD + N L + G +D A
Sbjct: 1287 RPDVFTYTELIRGLGKAGRIDEAYHFFCEM--QREGCRPDTVFMNNMINFLGKAGRLDDA 1344
Query: 346 EHL---LVTLRNAGHVST--EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L + TLR V T I +L + ++A ++P ERM++ + + T +L
Sbjct: 1345 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWF-ERMKESGISPSSFTYSIL 1402
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 22/349 (6%)
Query: 52 LHSYVQ-------NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL-DKVPQML 103
LH Y++ +K EA L + M E G+ YN +L Y Q D + +
Sbjct: 322 LHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFI 381
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
K +PDV++++ ++ACA+ E A + +K + P+ +S+ L Y K
Sbjct: 382 WIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTG 441
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
EKA M C N VA+ SLLS Y +VL +K+ L K++ ++
Sbjct: 442 NWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWS 501
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYN 278
IS+L K G++E AE ++++ ++ +G +PNI L+ AY + E AES +
Sbjct: 502 TTISALAKAGQWELAE---EKFKQMTKSGC--LPNIVTYSSLIKAYGDVGLWEKAESVFK 556
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
++ GI+P L Y K ++EKV+ F +++ PD A +
Sbjct: 557 LMLRVGIRPNPQACCALLRAYGKGKELEKVI-IFFESMEPQYGVEPDKYAYAAIFWACWT 615
Query: 339 QGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERM 384
G+ A + + AG + IY +L+ Y G++ + ++ERM
Sbjct: 616 CGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLERM 664
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 121/305 (39%), Gaps = 54/305 (17%)
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
+ T+N + AC +TA + F E++K I PD I+++ L S L ++A + +
Sbjct: 252 IFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFID 311
Query: 174 EMEKR--------------TC---RKNRVAYSSLLSLYTNMGYK------------DEVL 204
M+ R C RK R AY L + GY+ E
Sbjct: 312 MMQARGFSIGLHEYIEMQWACARARKPREAY-GLFQVMLEQGYELKLESYNALLCAYERT 370
Query: 205 RIWKKMMSLFAKMND-------AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
W+ M F + D ++ +IS+ G+ E+A + + + T D + P
Sbjct: 371 AQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMK----TSDCQ-P 425
Query: 258 NI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
N+ LL AY E AE ++ ++ G P W L Y K Q +KVL
Sbjct: 426 NVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTI 485
Query: 313 KK--AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+K +G V I+A L + G + AE + +G + + Y+SL++
Sbjct: 486 EKLEELGMKLDVVAWSTTISA----LAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKA 541
Query: 370 YAKAG 374
Y G
Sbjct: 542 YGDVG 546
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 47/365 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SAL+ ++ ++A L ++ E G L + YN +++ S G+ +V Q+L ++ +
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+N PD T+N+ + A + A+ + K PD ++Y+ L Y E +
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M KR + + Y+ L+ Y DE + ++K++ + A Y +I
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA------------------------ 263
L G + + DE + D NIL+ A
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Query: 264 -----------YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
Y RN + +A+ +NR+V G++P + +L GY K +++ + F
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQ----GDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
K+ + +PD A+YN L + G I + LL + ++G I YN LL
Sbjct: 499 KEM--RHKNLIPD----IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Query: 368 RTYAK 372
+ K
Sbjct: 553 DAFCK 557
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 162/396 (40%), Gaps = 24/396 (6%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL 67
GA VR Y ++ LQ++ T + L++ Y +A A +L
Sbjct: 63 GAIVRMGHYPTAISLFTQLQSKGISPSIA----------TFTILINCYFHQSHTAFAFSL 112
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACAS 126
+ + + G+ + +N ++N + NG + K Q L + D TY + +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ A E++K+ + P+ + YS L K A ++ +R + V
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+SL+ ++G EV ++ KM+ +D + +I +L K G +A+ +
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
D N L+ Y +R + A +NR+V +G++P + +L GY K ++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI 362
+ + FK+ + VP A+YN L + G I + LL + + +
Sbjct: 353 EAMVLFKELCN--KNLVP----TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406
Query: 363 -YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
YN L+ K G++ L ++ M K V+ + T
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 141/344 (40%), Gaps = 10/344 (2%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ A + R+ V +A+ L R + E PD + + L+ Y + K EA
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLE--PDVLNY----NVLIDGYCKTKMVDEAMV 356
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACA 125
L +++ + YN +++ ++G++ V ++L E+ + P DVVTYN+ + A
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A + + K + P+ ++Y+ + Y A M K + +
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y+ L++ Y DE + ++K+M + A Y +I L LG + + DE
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ D NILL A+ + A S + R + +GI P + T + K ++
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLF-RQIVEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ + K + + P+ + T N L + G A LL
Sbjct: 596 KMAEDALKHLL--MHGCSPNVQTYTILINALCKDGSFGEAMLLL 637
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 101/249 (40%), Gaps = 20/249 (8%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +A++ Y A+ + +M + G L YN ++N Y +D+ + +E+
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ KN PD+ +YN + + ++ E+ + PD I+Y+ L + K +
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR---------IWKKMMSLFAK 216
+KA + ++ + YTN D + + K ++
Sbjct: 562 DKAISLFRQ----------IVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N YT +I++L K G F +A + + E D I++ + RN+ + AE
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671
Query: 277 YNRLVTKGI 285
++ +G+
Sbjct: 672 REEMIARGL 680
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 167/387 (43%), Gaps = 25/387 (6%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+ + D+ P+ S +L Q KK +A+ L KM G + + YN +LN +
Sbjct: 220 LFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFC 279
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G LD +LQ L K+ V+ Y + E A + ++ + I PD +
Sbjct: 280 KSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM 339
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV--LRIWK 208
Y+ + + +A T L EM +R R + + Y++L+ + +MGY DE LR+
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
F N+ Y+ +I + K G KA++I+ E E + N L+ N
Sbjct: 400 SKHDCFP--NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457
Query: 269 QLEMAESFYNRL-----------VTKGIKPCY--TTWELLTWGYLKKGQMEKVLECFKKA 315
+LE A + ++ +++G + + +++ + G + K + +
Sbjct: 458 RLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQL 517
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ S +PD R N + G+I+GA L ++ GH+ + Y +L+ +AG
Sbjct: 518 VDS--GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAG 575
Query: 375 KM--PLIIVERMQKDNVQMDAETQKVL 399
+ L I E+M K ++ T K +
Sbjct: 576 RNEDALEIFEQMVKKGCVPESSTYKTI 602
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 134/333 (40%), Gaps = 9/333 (2%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
V ++Y + +A+++ + F+ PD + +LH V+ + A A+ +
Sbjct: 133 VLIEAYSEAGMDEKAVESFSLMRDFDCKPDLF----AFNLILHFLVRKEAFLLALAVYNQ 188
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQND 129
M +C + Y +++ + + E+ + P+ + Y++ L+
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A++ F +++ + + D I+Y+ L + + K + A T L+ + K + Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L++ +E ++KM+ K + YT +I L + G +A + E
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D N L+ + + L+ AES + P T+ +L G K G + K
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428
Query: 310 ECFKKA--IGSVRKWVPDHRLITAAY--NKLEE 338
FK+ +G + V + LI N+LEE
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKANRLEE 461
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 6/279 (2%)
Query: 101 QMLQELKKNTSPDVVT--YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
++LQELK N++ + + +++ + A + E A ++F ++ PD +++ +
Sbjct: 114 KVLQELK-NSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHF 172
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
++ E A +M K + V Y L+ + L ++ +M N
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y+ V+S L + + A+ ++ + + D N+LL + L+ A +
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
L G + L G + + E+ ++K + K PD L T L +
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK--PDVMLYTIMIRGLSQ 350
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+G + A LL + G T YN+L++ + G +
Sbjct: 351 EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 18/168 (10%)
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWL 121
A + +ME++ E G + L ++Q + PD+ TYN+ +
Sbjct: 492 ASLQVMMERLCESGMI------------------LKAYKLLMQLVDSGVLPDIRTYNILI 533
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ A K F E++ PD ++Y TL + E A ++M K+ C
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV 593
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
Y ++++ L +W K + F D + V S
Sbjct: 594 PESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESF 641
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 158/377 (41%), Gaps = 12/377 (3%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T A+++ + + + L+ +M+ G YN +++ +G + K + ++
Sbjct: 275 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ + PD+VTYN ++ A++ + + P+ SY+ L Y K
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A+ L EM +R + + V Y +L+ G D L I +KM+ + Y
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 454
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S L K + A+ + E S D V L+ +I L+ A + + KG
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P + + GY K G M+ + C + R PD + + +Q D+DG
Sbjct: 515 MNPGIVGYNAMIKGYCKFGMMKDAMACINRM--KKRHLAPDEFTYSTVIDGYVKQHDLDG 572
Query: 345 AEHL---LVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
A+ + +V ++ +V T Y SL+ + + G + L I MQ + + T +L
Sbjct: 573 AQKMFREMVKMKCKPNVVT--YTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630
Query: 400 --KITSEMPVSEVSSIF 414
E + + +S F
Sbjct: 631 IGSFCKEAKLIDAASFF 647
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 3/274 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N+ + ++ PD T AL+H V + A + EKM E G YN +++
Sbjct: 400 NWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+L +L E L ++ PD Y + + + A K F + ++P
Sbjct: 460 CKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI 519
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ Y+ + Y K + + A + M+KR + YS+++ Y D +++++
Sbjct: 520 VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 579
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ + K N YT +I+ + G+ ++ I+ E ++ + +IL+ ++ +
Sbjct: 580 MVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAK 639
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
L A SF+ ++ P T+ L G+ K G
Sbjct: 640 LIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG 673
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 148/353 (41%), Gaps = 7/353 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC ++ + K E L+E G + + YN +++ Y G ++ + EL
Sbjct: 207 TC-IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL 265
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K P V TY + + D + ++ +E+ + + Y+T+ K
Sbjct: 266 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 325
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA T++ M + C+ + V Y++L+S G E ++ ++ + N YT +
Sbjct: 326 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 385
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + K G +++A N E D L+ + ++++A + +++ +G+
Sbjct: 386 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 445
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + +L G KK ++ + + + +PD + + G++D A
Sbjct: 446 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD--QSVLPDAFVYATLVDGFIRNGNLDEA 503
Query: 346 EHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
L +T+ + YN++++ Y K G M + + RM+K ++ D T
Sbjct: 504 RKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT 556
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 22/248 (8%)
Query: 148 DWIS------------YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
DW+S YS+L L + + + L+ M R A S ++ Y+
Sbjct: 81 DWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYS 140
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTC--VISSLVKLGEFEKAENIYDEWESISGTGD 253
+ G ++ L ++ ++ + D C +++ LVKLG E A +YDE I G GD
Sbjct: 141 DSGLVEKALELYYFVLKTYTYFPDV-IACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGD 199
Query: 254 PRVPN----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
V N I++ +LE +G P + L GY KKG ME
Sbjct: 200 RCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMAN 259
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
F + ++ ++P A N ++GD + LL+ + + G V+ ++YN+++
Sbjct: 260 GLFIEL--KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIID 317
Query: 369 TYAKAGKM 376
K G +
Sbjct: 318 ARYKHGHI 325
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 134/275 (48%), Gaps = 14/275 (5%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN--LYISNGQLDKVPQMLQE 105
C+++L+ V+N K + L +M G + Y+ ML + + +G K ++L+E
Sbjct: 175 CNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGY-AKAMELLKE 233
Query: 106 LKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ N D V+Y +A CAS N E AE+ F +++ P+ Y +L + Y
Sbjct: 234 LQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMFHYGSLLNAYSINGD 293
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+KA +++M+ N+V ++LL +Y G ++ ++ ++ SL N+ Y
Sbjct: 294 YKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCL 353
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L K G +A+ ++DE ++ + D +I+++A+ LE A +L+ K
Sbjct: 354 LMDGLAKAGSIREAKTVFDEMKAKNVKTDGYAHSIMISAFCRGGLLEEA-----KLLAKD 408
Query: 285 IKPCYTTWELLTW-----GYLKKGQMEKVLECFKK 314
+ Y ++++ Y + G+ME V++ +K
Sbjct: 409 FEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRK 443
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 126/283 (44%), Gaps = 11/283 (3%)
Query: 124 CASQNDK-ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP-EKAATTLKEMEKRTCR 181
C +N K +T+ K F ++K + PD ++YST+ + I+++ KA LKE++
Sbjct: 181 CLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGYAKAMELLKELQDNGLC 240
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ V+Y +L+++ + ++ R + +M + N Y ++++ G+++KA+ +
Sbjct: 241 MDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADEL 300
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
++ + + + LL Y+ E + + L + G + LL G K
Sbjct: 301 IEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAK 360
Query: 302 KGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH--V 358
G + + F + +V+ H ++ +A+ + G + LL A +
Sbjct: 361 AGSIREAKTVFDEMKAKNVKTDGYAHSIMISAFCR----GGLLEEAKLLAKDFEATYDRY 416
Query: 359 STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
I N++L Y +AG+M + ++ +M + D T +L
Sbjct: 417 DIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHIL 459
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 47/365 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SAL+ ++ ++A L ++ E G L + YN +++ S G+ +V Q+L ++ +
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+N PD T+N+ + A + A+ + K PD ++Y+ L Y E +
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M KR + + Y+ L+ Y DE + ++K++ + A Y +I
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA------------------------ 263
L G + + DE + D NIL+ A
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Query: 264 -----------YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
Y RN + +A+ +NR+V G++P + +L GY K +++ + F
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQ----GDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
K+ + +PD A+YN L + G I + LL + ++G I YN LL
Sbjct: 499 KEM--RHKNLIPD----IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Query: 368 RTYAK 372
+ K
Sbjct: 553 DAFCK 557
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 153/375 (40%), Gaps = 22/375 (5%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL 67
GA VR Y ++ LQ++ T + L++ Y +A A +L
Sbjct: 63 GAIVRMGHYPTAISLFTQLQSKGISPSIA----------TFTILINCYFHQSHTAFAFSL 112
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACAS 126
+ + + G+ + +N ++N + NG + K Q L + D TY + +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ A E++K+ + P+ + YS L K A ++ +R + V
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+SL+ ++G EV ++ KM+ +D + +I +L K G +A+ +
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
D N L+ Y +R + A +NR+V +G++P + +L GY K ++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEE----QGDIDGAEHLLVTLRNAGHVSTEI 362
+ + FK+ + VP A+YN L + G I + LL + + +
Sbjct: 353 EAMVLFKELCN--KNLVP----TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406
Query: 363 -YNSLLRTYAKAGKM 376
YN L+ K G++
Sbjct: 407 TYNILIDALCKEGRI 421
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 141/344 (40%), Gaps = 10/344 (2%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+ A + R+ V +A+ L R + E PD + + L+ Y + K EA
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLE--PDVL----NYNVLIDGYCKTKMVDEAMV 356
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACA 125
L +++ + YN +++ ++G++ V ++L E+ + P DVVTYN+ + A
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A + + K + P+ ++Y+ + Y A M K + +
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y+ L++ Y DE + ++K+M + A Y +I L LG + + DE
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ D NILL A+ + A S + R + +GI P + T + K ++
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLF-RQIVEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ + K + + P+ + T N L + G A LL
Sbjct: 596 KMAEDALKHLL--MHGCSPNVQTYTILINALCKDGSFGEAMLLL 637
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 101/249 (40%), Gaps = 20/249 (8%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +A++ Y A+ + +M + G L YN ++N Y +D+ + +E+
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ KN PD+ +YN + + ++ E+ + PD I+Y+ L + K +
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR---------IWKKMMSLFAK 216
+KA + ++ + YTN D + + K ++
Sbjct: 562 DKAISLFRQ----------IVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N YT +I++L K G F +A + + E D I++ + RN+ + AE
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671
Query: 277 YNRLVTKGI 285
++ +G+
Sbjct: 672 REEMIARGL 680
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T ++L+ S ++ K +A + + M+ G Y MLN Y + G L
Sbjct: 318 LPDVV----TLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLV 373
Query: 98 KVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ ++ L +PD +N+ + A A + A F E+++ ++PD ++YST+
Sbjct: 374 DLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVI 433
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG----YKDEVLRIWKKMMS 212
+ ++ + A +M + + Y L+ + G KD VL++ K M
Sbjct: 434 AALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGM- 492
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ + + +I++L KLG A+NI+D SI + V N L+ Y ++E
Sbjct: 493 ---RPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMEN 549
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
A ++ +V+ GI+P + L GY K G++++ L F++ +
Sbjct: 550 ALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL 593
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 6/287 (2%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLY 90
FF + G DT S LL + K++AEA + L+ +M G + Y +L
Sbjct: 130 FFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSL 189
Query: 91 ISN---GQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
S+ GQ D++ +M+ E P+ V YN + + D A F E+ + I P
Sbjct: 190 CSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISP 249
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y+ + + K +KA L++M + + Y+SL+ Y++ G E +R+
Sbjct: 250 DLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVS 309
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
KKM S + +++SL K G+ + A +++D D I+L Y +
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
L +N +++ GI P + +L Y K G +++ F +
Sbjct: 370 GCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNE 416
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 158/379 (41%), Gaps = 55/379 (14%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVP 100
PD S +L S ++KS +A+ L+ M+E G + P + YN +++ + G ++K
Sbjct: 177 PDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKAC 236
Query: 101 QMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
+ E+ ++ SPD+ TYN + A + AE ++ + PD +Y++L Y
Sbjct: 237 DLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY 296
Query: 160 I-------------KME----LPEKAATTLKEMEKRTCRKNRV----------------- 185
KM LP+ TL + C+ ++
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPD--VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKT 354
Query: 186 ---AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+Y +L+ Y G ++ ++ M+S + + +I + K G ++A I+
Sbjct: 355 DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIF 414
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+E D + ++AA +++ A +N+++ +G+ P +T+ L G+
Sbjct: 415 NEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTH 474
Query: 303 GQMEK----VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGH 357
G + K VL+ K + PD N L + G + A+++ T+ H
Sbjct: 475 GDLLKAKDLVLQMMNKGMR------PDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLH 528
Query: 358 VSTEIYNSLLRTYAKAGKM 376
+ +YN+L+ Y GKM
Sbjct: 529 PNVMVYNTLMDGYCLVGKM 547
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 5/289 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+ ++ + ++G L K + LQ + K PD+ +N + A+ F
Sbjct: 464 YHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTI 523
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P+ + Y+TL Y + E A M + N V Y +L++ Y +G D
Sbjct: 524 SIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRID 583
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E L ++++++ K + Y ++ L + G A+ + E D +I+L
Sbjct: 584 EGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVL 643
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ + A + L +K TT ++ G + ++E+ + F S
Sbjct: 644 GGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASI--SRSG 701
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG--HVSTEIYNSLLR 368
VP + L ++G ++ A+ + ++ NAG ++++ N ++R
Sbjct: 702 LVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVR 750
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
K AEAE +M G L + Y +++ + G + + E+ ++ +PDV+TY
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
++ D A K F E+ ++PD ++++ L + Y K + A M +
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C N V Y++L+ G D + +M + + N Y +++ L K G E+A
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E+E+ D L+ AY +++ A+ ++ KG++P T+ +L G
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 299 YLKKGQME 306
+ G +E
Sbjct: 1014 FCLHGMLE 1021
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 5/293 (1%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
RA FF + + PD T +A++ + Q EA L +M G + + +
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 87 LNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+N Y G + D ++ SP+VVTY + + D ++A + E+ K +
Sbjct: 871 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P+ +Y+++ + K E+A + E E + V Y++L+ Y G D+
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAY 264
I K+M+ + + +++ G E E + + W G + N L+ Y
Sbjct: 991 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIAPNATTFNSLVKQY 1049
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
RN L+ A + Y + ++G+ P T+E L G+ K M++ F++ G
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 1102
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 133/358 (37%), Gaps = 39/358 (10%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-- 108
++H Q + EA L+ M G+ + Y+ ++N Y G+LDKV ++++ +K+
Sbjct: 695 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754
Query: 109 ----------------------------------NTSPDVVTYNLWLAACASQNDKETAE 134
PD V Y + + D A
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
K F E+ I PD ++Y+ + S + ++ +A EM + + V ++ L++ Y
Sbjct: 815 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G+ + R+ M+ N YT +I L K G+ + A + E I +
Sbjct: 875 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N ++ +E A G+ T+ L Y K G+M+K E K+
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYA 371
+G + P N G ++ E LL + G + +NSL++ Y
Sbjct: 995 MLG--KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 141/336 (41%), Gaps = 9/336 (2%)
Query: 46 DTCSALLHSYVQN-KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
D+C+ L ++ K+A A + + E G YN +++ G++ + +L
Sbjct: 654 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 713
Query: 105 ELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
++ K +PDV++Y+ + + + K +K+ + P+ Y ++ L ++
Sbjct: 714 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A EM ++ + V Y++L+ + G + + +M S + YT
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+IS ++G+ +A ++ E D L+ Y ++ A +N ++
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRKWVPDHRLITAAYNKLEEQGD 341
G P T+ L G K+G ++ E + IG P+ + N L + G+
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG----LQPNIFTYNSIVNGLCKSGN 949
Query: 342 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
I+ A L+ AG + T Y +L+ Y K+G+M
Sbjct: 950 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 985
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 3/273 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L++ Y + +A + M + G + Y +++ G LD ++
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E+ K P++ TYN + + E A K E + ++ D ++Y+TL Y K
Sbjct: 922 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+KA LKEM + + V ++ L++ + G ++ ++ M++ N
Sbjct: 982 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ + A IY + S D + L+ + ++ A + +
Sbjct: 1042 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KG +T+ +L G+LK+ + + E F +
Sbjct: 1102 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 150/355 (42%), Gaps = 9/355 (2%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
+++SYVQ++ + + +M + GF+ +N++L + + ++ E K
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
DV ++ + + C + E + +EL + P+ + Y+TL K EKA
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM K N Y+ L++ G K + +++KM N Y CV++ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + A ++DE + + N L+ +L A +++ + GI P
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 290 TTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G+ G++ K L + K+ G V + L++ K GD GA
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK----GDTSGAAK 394
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLIIVERMQKDNVQM--DAETQKVL 399
++ + G +++ Y L+ T+A++ M I R+ + + + D T VL
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 2/288 (0%)
Query: 29 RARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+A++ FFE + + T + L++ +N + + EKM E G YN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
N +G+ Q+ E++ + S ++VTYN + + A K ++K I+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ I+Y+TL + + KA + ++++ R + V Y+ L+S + G ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
K+M K + YT +I + + EKA + E + D ++L+ +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ Q+ A + +V K +P + + GY K+G + L+ K+
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 11/256 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + K EA ++++M G + YN +++ + G+L K + ++L
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + SP +VTYN+ ++ + D A K E+++ I P ++Y+ L + + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA ME+ + YS L+ + G +E R++K M+ + N+ Y +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I K G +A + E E PN+ ++ + + AE ++
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEE-----KELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 281 VTKGIKPCYTTWELLT 296
+ GI P + L++
Sbjct: 540 IDSGIDPSTSILSLIS 555
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 159/354 (44%), Gaps = 19/354 (5%)
Query: 30 ARENFFENLPDKMRG-PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPY 83
AR F E L RG PD S LL+ +S EA L+ M++ G CP + Y
Sbjct: 36 ARHVFDELL---RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGG-DCPPDVVSY 91
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+ ++N + G LDK+ L + SP+VVTYN +AA + A + + K+
Sbjct: 92 STVINGFFKEGDLDKM------LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ PD ++Y+++ + P++A LK+M + V Y+SL+ G E
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+I+ M K + Y ++ G + + D + V +IL+ A
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + ++E A ++++ +G+ P T+ + K G++E + F++ I +
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR-- 323
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
PD + + + L + AE L + + + G +ST +NS++ ++ K G++
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD M T ++++H + + + EA ++KM G + YN +++ NG+
Sbjct: 148 MPDCM----TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ ++ + K+ PD+ TY L A++ + + I P+ +S L
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
Y K E E+A +M ++ N V Y +++ + G ++ + +++M+ +
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR 323
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ Y +I SL ++EKAE ++ E N ++ ++ ++ +
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383
Query: 277 YNRLVTKGIKPCYTTWELLTWG 298
++ +V G+KP +++T G
Sbjct: 384 FDLMVRIGVKP-----DIITLG 400
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 4/310 (1%)
Query: 8 GAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEA 64
G Q+ SY + +A +TRA N+ + P+ S +++S ++K +A
Sbjct: 79 GFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDA 138
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAA 123
L +M + YN ++ + G+L + + Q L KN PD+ T+N+ +
Sbjct: 139 FDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDG 198
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
+ + + A + K +DPD I+Y++L Y ++ KA M +R +
Sbjct: 199 LCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 258
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
+YS +++ DE + + K+M S N Y+ +I L K G A ++ +
Sbjct: 259 VHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVN 318
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
E + D N LL A +Q++ A + ++ +GI+P T+ +L G K G
Sbjct: 319 EMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNG 378
Query: 304 QMEKVLECFK 313
+++ E ++
Sbjct: 379 RLKDAQEVYQ 388
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 33 NFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N + + K P+T S+L+ ++ + +A L+ +M G + YN +L+
Sbjct: 280 NLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDAL 339
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
N Q+DK +L ++K + PD+ TY + + + A++ + L
Sbjct: 340 CKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQIL--------L 391
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I L SL+ +KA + L +ME C N V + L+ D+ + + ++
Sbjct: 392 IKGYHLDSLF------DKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLRE 445
Query: 210 MMS 212
M++
Sbjct: 446 MIA 448
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 48/393 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++LL+ + + EA+ ++E+M GF+ Y + + ++ G +D + +E
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++K T ++ L A + + E AE+ + + + P + ++T+ + Y ++
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-------------- 211
KA TT+++ME R N V Y+SL+ + M +E + KKM+
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468
Query: 212 -------SLF--------------AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
LF K N Y C+I+ L K +AE I +
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ ++ N+L+ +L+ A F++ +V + I P T+ +L G KKG KV+E
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG---KVME 585
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKL----EEQGDIDGAEHLLVTLRNAGHVSTEIYNSL 366
A RK + +IT YN L G++ A L T++ +G T N+
Sbjct: 586 AENLASEITRKGL-SFDVIT--YNSLISGYSSAGNVQKALELYETMKKSGIKPT--LNTY 640
Query: 367 LRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
R A GK L++VE++ ++ +QM+ +V+
Sbjct: 641 HRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVI 673
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 143/338 (42%), Gaps = 45/338 (13%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ + + K EAE ++KM E G L YN +++ Y + D+ Q+L+E+
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 107 -KKNTSPDVVTYNLWL-AACASQNDKET-------------------------------- 132
KK P+V++Y + C N E
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548
Query: 133 --AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A + F E+ +I P ++Y+ L + K +A E+ ++ + + Y+SL
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+S Y++ G + L +++ M K Y +I+ K G E IY E ++
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNL 667
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D + N L+ Y+ ++ A S ++ + +GI+P T+ L G+ K+G+M KV
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKN 727
Query: 311 CFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGA 345
+R +P + ++ + KL+ D DGA
Sbjct: 728 LVNDM--KIRGLIPKTETYDILIVGHCKLK---DFDGA 760
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 130/331 (39%), Gaps = 10/331 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
LL ++K +E+ L M + G L N L +S + + Q+ E+ +
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD Y + A D + A + +K+ + P Y+ + K + + A
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM R NR+ Y++L+ Y +G +E I ++M + + +++ L
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGL 297
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ E+A+ + +E E D L ++ ++ + + V KG++
Sbjct: 298 CRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILD 357
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T +L K+G MEK E KK + + P N + GDI+ A +
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLEN--GLAPVGVFFNTIVNGYCQVGDINKAYTTI 415
Query: 350 VTLRNAG----HVSTEIYNSLLRTYAKAGKM 376
+ G HV+ YNSL++ + + M
Sbjct: 416 EKMEAVGLRPNHVT---YNSLVKKFCEMKNM 443
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 143/335 (42%), Gaps = 5/335 (1%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T S L+ + +A ++++M G Y ++ Y+ + + ++L+
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 105 ELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ N PD+ YN + E A+ +++ + I P+ +Y +LY K
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ A K+M N V Y+ L+ + ++G E L +K M+ + Y+
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I SL K G+ ++A ++ ++ D + N L++ + +E A Y+ ++
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 284 GIKPCYTTWELLT--WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
GI P + L +GY K G + + + F + I + PD + + ++G+
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS--KGISPDGYIYCILIDGCGKEGN 748
Query: 342 IDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
++ A L + S +NSL+ ++ K GK+
Sbjct: 749 LEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKV 783
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 145/342 (42%), Gaps = 42/342 (12%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELK 141
Y +++ + G + K +L E++K P++ TYN ++ C + E E L ++
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K + PD +Y+ L + K + ++A + M NR Y++L+ + G +
Sbjct: 305 K-GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----------WES---I 248
E LRI +M++ K+N Y +I + K GE KA ++++E W I
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLI 423
Query: 249 SG----------------------TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
G T P ++L++ + + L+ A ++++ G+K
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + L Y+++ + E +E K I + +PD L ++ A+
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIAN--GVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
LLV + G + Y + + Y+K+G++ + ER KD
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ--VAERYFKD 581
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N +++ + +G++ + ++ ++ K +P++VTY + + A E AE+ FL+++
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
I P+ ++Y++L Y ++ K + K+ME R + +AY + S Y G
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 889
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
E L++ K + K+ D + +I L K
Sbjct: 890 EALKLLNKSLVEGIKLEDDVFDALIFHLCK 919
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 112/334 (33%), Gaps = 107/334 (32%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE--- 105
SA++HS +N K+ EA + K + G + YN +++ + G ++K Q+ E
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 106 -----------------------------------LKKNTSPDVVTYNLWLAACASQNDK 130
+ K SPD Y + + C + +
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 749
Query: 131 ETAEKAFLELKKT----------------------------------KIDPDWISYSTLT 156
E A F E ++ K+ P+ ++Y+ L
Sbjct: 750 EKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 809
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
Y K E+ E+A +ME R N + Y+SLL Y +G + KM+SLF
Sbjct: 810 DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR-------FKMISLFKD 862
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
M C D ++ +AY + A
Sbjct: 863 MEARGIAC----------------------------DAIAYGVMASAYCKEGKSLEALKL 894
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
N+ + +GIK ++ L + K+ Q+ VLE
Sbjct: 895 LNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 928
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 147/361 (40%), Gaps = 39/361 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S ++ S + +S A+ + ++ GF Y+ ++ Y +G+L K ++ + +K
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P++V YN + AC+ D TA + F E+ + + PD I+++TL S + E+
Sbjct: 184 VCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEEC 243
Query: 169 ATTLKEMEKRT---------------CRKNR---------------------VAYSSLLS 192
EME+R CR + + YS+++
Sbjct: 244 DRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMID 303
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
Y +G E + ++++M + + + Y ++ +LG F++A +I E
Sbjct: 304 GYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAK 363
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N LL +Y + + A S + +G P T+ L Y K G + F
Sbjct: 364 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALF 423
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
+ + + PD L + + + G D A LL + + G I YNSLL Y
Sbjct: 424 QDVKKAGLQ--PDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYG 481
Query: 372 K 372
+
Sbjct: 482 R 482
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 122/278 (43%), Gaps = 4/278 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + ++ PD T + L+ + + + E + + +M E G + + YN ++ Y
Sbjct: 211 IFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYC 270
Query: 92 SNGQLDKVPQMLQELKKNTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
GQ+ +++ + K++ P V+TY+ + A A F E++ ++PD
Sbjct: 271 RGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDG 330
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I Y+T+ ++ ++ ++A + + ME+ K+ V Y++LL Y G E + + ++
Sbjct: 331 ICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEE 390
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M A N Y+ +I + K G A ++ + + D + + L+
Sbjct: 391 MKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGS 450
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ A + + GI+P T+ L Y ++ M +
Sbjct: 451 PDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVR 488
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 44/245 (17%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL SY + K EA +L+E+M + G L Y+ +++ Y +G + Q++
Sbjct: 367 TYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDV 426
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY------ 159
KK PDVV Y+ + C + A E+ I P+ I+Y++L Y
Sbjct: 427 KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLM 486
Query: 160 IKMELPE-----------------------------------KAATTLKEMEKRTCRKNR 184
++ P+ AA +EM K + N
Sbjct: 487 VRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNV 546
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
V +SS+L+ ++ ++ + + M ++ + ++ +++ + AE +++E
Sbjct: 547 VTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLMGFRIRV--WRDAETLFNE 604
Query: 245 WESIS 249
++
Sbjct: 605 LTTLG 609
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 14/277 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++ + +++ +A L+++M + G YN ++ +LD+ +ML+E+ +
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PDVVTYN ++ + + A K L + + PD +SY+T+ + K + A+
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSAS 234
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L M R C + V YSSL+ + G + + + M+ L + N Y ++ +L
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+LG KAE++ E E T D N + +++ A++ ++R+V +G P
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354
Query: 290 TTWELLTW----------GYLKKGQMEKVLECFKKAI 316
+++ +L G K G+ ++ F K +
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 52/342 (15%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S +++ ++ A +++ MS G + Y+ +++ + G++++ +
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L LK P++V YN L A AE +E+++ PD +SY+ K
Sbjct: 272 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLS---LYTNM-------GYKDEVLRIWKKMM 211
E +KA M +R C N +YS L+ LYT + G DE ++ K++
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391
Query: 212 SLFAKMNDAE---YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
K+ + + Y ++ S K + +KA I+ + + NIL+ +
Sbjct: 392 D--EKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE-KNCCNVVTWNILVHGLCVDD 448
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSV------- 319
+L AE+ +V +G P + T+ L K G+ LE F++A+ G V
Sbjct: 449 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 508
Query: 320 ------------------------RKWVPDHRLITAAYNKLE 337
R+WVPD + + + KL+
Sbjct: 509 ALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLK 550
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 106/265 (40%), Gaps = 6/265 (2%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
+V TYN L ++ + A F E+ PD +++ L + EKA L
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
M++ C + Y++L+S Y+ + + +M+ YT ++ L K
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
A + DE + + N+++ +L+ A+ + +G P T+
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 293 ELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
G K ++++ +K + + PD T N L + GD+D A +L +
Sbjct: 186 NSFIKGLCKCDRVDEA----RKFLARM-PVTPDVVSYTTVINGLCKSGDLDSASRMLDHM 240
Query: 353 RNAGHVSTEI-YNSLLRTYAKAGKM 376
N G + Y+SL+ + K G++
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEV 265
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 123/332 (37%), Gaps = 21/332 (6%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
LL + + +A A+ ++M + + +L + QL+K ++L +K+
Sbjct: 13 LLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG 72
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD YN ++ + D A K E+ K P ++Y+ + K E A
Sbjct: 73 CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAV 132
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L EM + C N Y+ ++ DE ++ ++M + Y I L
Sbjct: 133 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 192
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKG 284
K ++A P P++ ++ L+ A + + +G
Sbjct: 193 CKCDRVDEARKFLARM--------PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRKWVPDHRLITAAYNKLEEQGDI 342
P T+ L G+ K G++E+ + +G V + L+ A L G I
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA----LHRLGHI 300
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
AE +LV + G + YN+ + KA
Sbjct: 301 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 332
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L+H + + ++AE ++ M + GF+ + Y +++ G+ ++ +E +K
Sbjct: 440 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL---PE 166
PDVVTY+ + +N E A F +L + + PD TL L+ K++L P
Sbjct: 500 CVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDD---KTLGLLHRKLKLLNKPR 556
Query: 167 KA 168
KA
Sbjct: 557 KA 558
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 155/362 (42%), Gaps = 14/362 (3%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
R A+ QALQ F + + C ++ + K A + E MS+ G
Sbjct: 7 RGARRQALQVF---RFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAP 63
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDK-ETAEKA 136
Y +L+ Y G L + + + +K K SP+V+TYN + AC + +
Sbjct: 64 SVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGL 123
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
F E+K+ + P+ I+Y+ + + + + L + A+ LKEM+ C N ++Y+++++
Sbjct: 124 FEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGR 183
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G DE + ++++M L N Y ++ + + G +EKA ++ E D
Sbjct: 184 SGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYT 243
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK---KGQMEKVLECFK 313
N ++ AE + + KG P T+ + Y K +G+ +L+ K
Sbjct: 244 YNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMK 303
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+A + W + L A + G A + L+ AGH + +++L+ Y +
Sbjct: 304 RAGCTPDLWTYNILLDAAG-----KAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGR 358
Query: 373 AG 374
G
Sbjct: 359 LG 360
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ +++S ++ + EA L E+M E G YN +L Y G+ +K + ++
Sbjct: 175 TTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMED 234
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ PD+ TYN + C AE FLE+++ PD ++Y+T+ Y K +
Sbjct: 235 EGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGR 294
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A LK M++ C + Y+ LL G E ++I+ ++ + N ++ +I+
Sbjct: 295 ARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALIN 354
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+LG FE+AE W + TG VPN
Sbjct: 355 MYGRLGYFEEAER---AWVEMRATGC--VPN 380
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + + R P+ T ++LL +Y + + +A L M + G + YN ++++
Sbjct: 193 LFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCG 252
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + E+ +K +PD VTYN L A + + + A +K+ PD
Sbjct: 253 RGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLW 312
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K +A E++ N V++S+L+++Y +GY +E R W +M
Sbjct: 313 TYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEM 372
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFE 236
+ N Y +++S G ++
Sbjct: 373 RATGCVPNATAYCGLMNSYSHHGMYK 398
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 122/322 (37%), Gaps = 43/322 (13%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAAC 124
L E+M + G + YN M+N + D Q+L+E+K N P+V++Y + +
Sbjct: 122 GLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSL 181
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ A + F E+K+ P+ +Y++L Y + EKA ME C
Sbjct: 182 GRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGC---- 237
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ LYT Y VI + G F +AE ++ E
Sbjct: 238 -----IPDLYT--------------------------YNTVIDMCGRGGLFAEAEGVFLE 266
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ T D N +L AY ++ A + G P T+ +L K G
Sbjct: 267 MQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGS 326
Query: 305 MEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STE 361
+ ++ F KA G V LI Y +L G + AE V +R G V +
Sbjct: 327 ASEAMQIFHELKAAGHSPNLVSFSALIN-MYGRL---GYFEEAERAWVEMRATGCVPNAT 382
Query: 362 IYNSLLRTYAKAGKMPLIIVER 383
Y L+ +Y+ G ++ R
Sbjct: 383 AYCGLMNSYSHHGMYKVLCCIR 404
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 168/391 (42%), Gaps = 14/391 (3%)
Query: 21 AQAQALQTRARENFFENLPDKMR---GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
A ++A+ A + F LP + G + +ALL ++V+ ++ ++A+A +S F
Sbjct: 92 AFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFG 151
Query: 78 KCPLP----YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKET 132
+ P YN +L + G LD+ + L++ +PD +TY+ + A Q+ +
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDH 211
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLL 191
A E+ ++ + PD + Y+ L K EK ++ K R N Y+ +L
Sbjct: 212 ALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVML 271
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
G EV +W++M++ + + Y +I L + G+ + A +Y E
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D + N L+ + +++ A F++ G++ T+ ++ G G +++ +E
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKGLFDSGMVDEAIEL 390
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
+ V +PD + L + G + A + R +G + Y+S++
Sbjct: 391 WDLLEKDV-ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449
Query: 371 AKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
G++ + + E+M KD + ++ L
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 128/310 (41%), Gaps = 4/310 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++L+ + Q + EA + G L+ YN M+ +G +D+ ++ L+K
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396
Query: 109 NTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ + PD VT+ + A F E + + D SYS++ + +
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A ++M+K C+ N Y++L+S + + + +RI+ KM Y +I
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K ++++A ++ E T D L+ + +++ A S + +++ KG+K
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+L G G++++ L F + + P+ + L E G ID A
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSD-MKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 347 HLLVTLRNAG 356
L ++ G
Sbjct: 636 TLWTSITEDG 645
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 123/301 (40%), Gaps = 39/301 (12%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + L+H QN + +A + E+ G Y+ M+N + G+L ++
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++ K+ P+ YN ++ A + + ++ P I+Y+TL K
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E ++A++ +EM + + Y SL+ + D+ L IWK+++ K++
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 222 YTCVISSLVKLGEFEKAENIYDE---------------------------------WESI 248
+ +I L G+ ++A +++ + W SI
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 249 SGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ G +P + N + + +++ + ++++GI P TW +L +K G +
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701
Query: 306 E 306
+
Sbjct: 702 Q 702
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 169/391 (43%), Gaps = 14/391 (3%)
Query: 21 AQAQALQTRARENFFENLPDKMR---GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
A ++A+ A + F LP + G + +ALL ++V+ ++ ++A+A +S F
Sbjct: 92 AFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFG 151
Query: 78 KCPLP----YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKET 132
+ P YN +L + G LD+ + L++ +PD +TY+ + A Q+ +
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDH 211
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSLL 191
A E+ ++++ PD + Y+ L K EK ++ K R N Y+ +L
Sbjct: 212 ALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVML 271
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
G EV +W++M++ + + Y +I L + G+ + A +Y E
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D + N L+ + +++ A F++ G++ T+ ++ G G +++ +E
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKGLFDSGMVDEAIEL 390
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
+ V +PD + L + G + A + R +G + Y+S++
Sbjct: 391 WDLLEKDV-ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449
Query: 371 AKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
G++ + + E+M KD + ++ L
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 128/310 (41%), Gaps = 4/310 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++L+ + Q + EA + G L+ YN M+ +G +D+ ++ L+K
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396
Query: 109 NTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ + PD VT+ + A F E + + D SYS++ + +
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A ++M+K C+ N Y++L+S + + + +RI+ KM Y +I
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K ++++A ++ E T D L+ + +++ A S + +++ KG+K
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+L G G++++ L F + + P+ + L E G ID A
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSD-MKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 347 HLLVTLRNAG 356
L ++ G
Sbjct: 636 TLWTSITEDG 645
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 123/301 (40%), Gaps = 39/301 (12%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + L+H QN + +A + E+ G Y+ M+N + G+L ++
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++ K+ P+ YN ++ A + + ++ P I+Y+TL K
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E ++A++ +EM + + Y SL+ + D+ L IWK+++ K++
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 222 YTCVISSLVKLGEFEKAENIYDE---------------------------------WESI 248
+ +I L G+ ++A +++ + W SI
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 249 SGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ G +P + N + + +++ + ++++GI P TW +L +K G +
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701
Query: 306 E 306
+
Sbjct: 702 Q 702
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 147/361 (40%), Gaps = 39/361 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S ++ S + +S A+ + ++ GF Y+ ++ Y +G+L K ++ + +K
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 184
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P++V YN + AC+ D TA + F E+ + + PD I+++TL S + E+
Sbjct: 185 VCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEEC 244
Query: 169 ATTLKEMEKRT---------------CRKNR---------------------VAYSSLLS 192
EME+R CR + + YS+++
Sbjct: 245 DRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMID 304
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
Y +G E + ++++M + + + Y ++ +LG F++A +I E
Sbjct: 305 GYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAK 364
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N LL +Y + + A S + +G P T+ L Y K G + F
Sbjct: 365 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALF 424
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
+ + + PD L + + + G D A LL + + G I YNSLL Y
Sbjct: 425 QDVKKAGLQ--PDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYG 482
Query: 372 K 372
+
Sbjct: 483 R 483
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 122/278 (43%), Gaps = 4/278 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + ++ PD T + L+ + + + E + + +M E G + + YN ++ Y
Sbjct: 212 IFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYC 271
Query: 92 SNGQLDKVPQMLQELKKNTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
GQ+ +++ + K++ P V+TY+ + A A F E++ ++PD
Sbjct: 272 RGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDG 331
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I Y+T+ ++ ++ ++A + + ME+ K+ V Y++LL Y G E + + ++
Sbjct: 332 ICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEE 391
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M A N Y+ +I + K G A ++ + + D + + L+
Sbjct: 392 MKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGS 451
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ A + + GI+P T+ L Y ++ M +
Sbjct: 452 PDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVR 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 44/245 (17%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL SY + K EA +L+E+M + G L Y+ +++ Y +G + Q++
Sbjct: 368 TYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDV 427
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY------ 159
KK PDVV Y+ + C + A E+ I P+ I+Y++L Y
Sbjct: 428 KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLM 487
Query: 160 IKMELPE-----------------------------------KAATTLKEMEKRTCRKNR 184
++ P+ AA +EM K + N
Sbjct: 488 VRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNV 547
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
V +SS+L+ ++ ++ + + M ++ + ++ +++ + AE +++E
Sbjct: 548 VTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLMGFRIRV--WRDAETLFNE 605
Query: 245 WESIS 249
++
Sbjct: 606 LTTLG 610
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 166/392 (42%), Gaps = 58/392 (14%)
Query: 36 ENLPDKMRGPD----------TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
+NL D M D T + L+ +Y + +EA +L E+M GFL + Y+
Sbjct: 137 DNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSS 196
Query: 86 MLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNL-----------W------------- 120
++N G L + +L+E+ K +P+ V Y + W
Sbjct: 197 IINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCG 256
Query: 121 ----LAACASQND-------KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
L C + D + AE F L K P+ I+Y+ + Y K+ + A
Sbjct: 257 VSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAE 316
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ L++MEK+ N V YSS+++ YT G D +RI KKM+ N Y +I
Sbjct: 317 SLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGH 376
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR----NQLEMAESFYNRLVTKGI 285
+K G+ + A ++Y+E + ++G + + ++ A+IN ++E AE +++KG+
Sbjct: 377 LKAGKQDAAVDLYNEMK-LNGLEE---NSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGL 432
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ L G+ K G+ +K + K+ D N L G D A
Sbjct: 433 LLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKF--DVVAYNVLINGLLRLGKYD-A 489
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
E + +R G YN+++ Y K GK+
Sbjct: 490 ESVYSGIRELGLAPDRATYNTMINAYCKQGKL 521
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 9/356 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD--KVPQMLQEL 106
++L+ + + + + A + EKM+E G + YN ++N + G+ D V ++EL
Sbjct: 440 TSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIREL 499
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+PD TYN + A Q E A K + E+K + P+ I+ + L K E
Sbjct: 500 --GLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETE 557
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L EM N + +LL+ + D +L++ K+++ + K N Y +I
Sbjct: 558 RAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLI 617
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ L LG ++A + + + D N L+ + + +E A + Y +++ +G+
Sbjct: 618 TVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVS 677
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ LL G L G M K E K S PD L + + G+ A
Sbjct: 678 PGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLD--PDASLYNTLISGHGKIGNKKEAI 735
Query: 347 HLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
+ G V T YN L+ +AK GKM ++ MQ V ++ T +L
Sbjct: 736 KFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDIL 791
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H + ++ +A A +M G YN +L ++ G + K ++L ++
Sbjct: 647 TYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKM 706
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD YN ++ +K+ A K + E+ + P +Y+ L + K+
Sbjct: 707 KDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKM 766
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-----SLFAKMNDA 220
++A L EM+ R N Y L+ + N+ + E+ RI KK +LFA+MN+
Sbjct: 767 DQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEK 826
Query: 221 EYT-------CVISSLVKLGEFEKAENI 241
+ C+ S+ + G A+++
Sbjct: 827 GFVPCENTLACISSTFARPGMVVDAKHM 854
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK-VPQMLQELKKNTSPDVVTYNLWLA 122
A ++ M++ G + YN +++ + + ++K + Q L + SP + TYNL L
Sbjct: 629 ATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLG 688
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ A + ++K + +DPD Y+TL S + K+ ++A EM +
Sbjct: 689 GLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVP 748
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
Y+ L+ + +G D+ + +M N + Y +I L
Sbjct: 749 KTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNL 798
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 152/367 (41%), Gaps = 40/367 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ V + AE + E M + + YN M+ Y G+L K + +++
Sbjct: 222 TYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDM 281
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ KN PD +TY + AC S+ D +T +LE+++ ++ SYS + K
Sbjct: 282 EMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKC 341
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------------- 210
+A + M ++ CR N Y++L+ Y+ G +E +R++++M
Sbjct: 342 MEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVL 401
Query: 211 -------------MSLF-------AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
M LF +N Y +I L K G E AEN+++E
Sbjct: 402 VNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGC 461
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D N ++ A +++ A + + R+ +G T+ +L G K+ + E+ ++
Sbjct: 462 ARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIK 521
Query: 311 CFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRT 369
+ K I + V R + L G + A +L L G + + ++ T
Sbjct: 522 FWDKMIDKGITPTVASFRALAIG---LCLCGKVARACKILDDLAPMGIIPETAFEDMINT 578
Query: 370 YAKAGKM 376
KA ++
Sbjct: 579 LCKAQRI 585
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 145/317 (45%), Gaps = 13/317 (4%)
Query: 92 SNGQLDKVPQML---QELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
S G L V ++L + +K+N P + TYN + + E+AEK F + KI P
Sbjct: 194 SFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVP 253
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL-SLYTNMGYKDEVLRI 206
D ++Y+ + Y K +KA ++ME + + +++ Y +L+ + Y+ + D L +
Sbjct: 254 DTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF-DTCLSL 312
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ +M ++ Y+ VI L K + +A +++ + + L+ +Y
Sbjct: 313 YLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSK 372
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+E A + R+ +G +P T+ +L G K G+++ +E F K V +
Sbjct: 373 NGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFC---RNKGVAIN 429
Query: 327 RLITAA-YNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVE 382
+ A+ + L + G I+ AE+L + G + YN+++ AK GK+ L +
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 489
Query: 383 RMQKDNVQMDAETQKVL 399
RM+++ T +L
Sbjct: 490 RMEEEGCDQTVYTFTIL 506
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 13/304 (4%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALM 68
+RA R RV A A+ F+++ + P T S LL + + +A L+
Sbjct: 169 IRALCVRGRVPDALAV--------FDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLL 220
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAA-CAS 126
++M G + YN ++N + G +D+ +L +L + PD VTY L + C S
Sbjct: 221 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGS 280
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ KE E+ F E+ K PD ++++T+ + + L ++A + M + C + V
Sbjct: 281 ERWKEV-EELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVT 339
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
YSS+L ++G D+ + + ++ S K + YT V+ L + ++E AE + E
Sbjct: 340 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
D N ++A+ + ++ A ++ G P T+ + G + ++
Sbjct: 400 CSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCID 459
Query: 307 KVLE 310
+E
Sbjct: 460 DAME 463
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 140/347 (40%), Gaps = 6/347 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N +LP PD T + +L S +++ E E L +M+ + +N ++
Sbjct: 253 NILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSL 312
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G +D+ +++ + ++ PD+VTY+ L + A + LK PD
Sbjct: 313 CQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 372
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y+T+ +E E A + EM C + V ++++++ G D +++ ++
Sbjct: 373 IAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQ 432
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + Y +I L + A + +S D N LL + ++
Sbjct: 433 MSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR 492
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
E AE ++ P TT+ + +KG + + +E K I + +P+
Sbjct: 493 WEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLK--IMAENGCIPNQSTY 550
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ L + G A LL + N G YN+++ KAGKM
Sbjct: 551 NIVVDALLKAGKTQEALKLLSGMTN-GTPDLITYNTVISNITKAGKM 596
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 141/351 (40%), Gaps = 10/351 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C+ L+ + A+AE + + G + YN M+N Y G+++ +++ +
Sbjct: 101 CNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP 157
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PD T+N + A + A F ++ P ++YS L K +
Sbjct: 158 --FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + C + V Y+ L++ N G DE L I + S K + YT V+
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
SL +++ E ++ E S D N ++ + + ++ A + + G P
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + G G+++ +E + K PD T L + AE
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK--PDTIAYTTVLKGLCSIEQWEHAEE 393
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
L+ + + E+ +N+++ + + G + + +VE+M ++ D T
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT 444
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 153/366 (41%), Gaps = 42/366 (11%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
L++S + AE L M+ GF + Y +++ + +G++ + + E+ +
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PDV+T+ + + + E A K+F E+ + P+ ++Y+T+ K+ A
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+K M C + V Y LL + +G DE ++ ++ + N Y+ +++ L
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480
Query: 230 VKLGEFEKA-ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
G EK ++++++ ++ + T DP + ++ +L+ A + R+V++G KP
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540
Query: 289 YTTWELLT-----------------------WGYL--------------KKGQMEKVLEC 311
TT+ +L GYL K G++++ ++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTY 370
++A S R W D TA L QG +D A L + R G Y ++
Sbjct: 601 LEEA--SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658
Query: 371 AKAGKM 376
K K+
Sbjct: 659 IKVKKL 664
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 17/279 (6%)
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWL-AACASQNDKETAEKAFL---ELKKTKIDP 147
G+LD+ ++ Q + + PD TYN+ + C S+ ++ E+AF +L+K P
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR--VERAFALLHDLEKVGYLP 576
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D ++Y+ L K+ ++A L+E R + VAY++L + G D + ++
Sbjct: 577 DAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYI 265
++M+ + A Y C+I+ L+K+ + E A +DE I P V L+ A
Sbjct: 637 QEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEM--IGKGQKPTVATYTALVQALC 694
Query: 266 NRNQLEMAESFYNRLVTKG-IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
+ ++ A + ++ +G + ++ L G+ K +++ L+ F+ I R VP
Sbjct: 695 HAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS--RGNVP 752
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG---HVST 360
+ ++ L G + A+ LL + G H +T
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 134/341 (39%), Gaps = 42/341 (12%)
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETA 133
GF YN ++NL ++ + + +E LK +P+ ++N+ + + A + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE------------------- 174
F +K+ + PD ++ L K + EKA E
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 175 -----------------MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
MEK + +AY++++ G+ E L++ M++
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +++SL K G E+AE ++ + + + L+ + +++ A S +
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKL 336
+ +V G +P T ++ G K G E+ + F++ + G + V + I +K+
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
G + A ++ + G + Y LL + K G++
Sbjct: 414 ---GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 3/245 (1%)
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A + F +++K PD I+Y+T+ K ++A L M + C V Y L++
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
G + +++ M + + N YT +I K G ++A +++DE
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRP 363
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D +++ E A + ++ G KP T+ + G K G++
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYA 371
K I PD + + G +D A LL L + + + ++Y+SL+
Sbjct: 424 KGMI--AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLC 481
Query: 372 KAGKM 376
G +
Sbjct: 482 DGGSV 486
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 135/324 (41%), Gaps = 4/324 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T +AL++ ++N + A + M + G L YN ++ Y + G +K ML
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
LK +P +VTYN+ + D + A + +K PD SY+ L S + K+
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A+ EM R N V Y++L+S Y D R+ ++M + N Y +
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K F AE + + D + ++ N + +A +N++V G
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L ++G++E+ E F + + +PD G +D A
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSEL--KKQGLIPDEVTYVKMIEVCVMSGKVDRA 699
Query: 346 EHLLVTLRNAGHVST-EIYNSLLR 368
L + NAG T + Y+ L++
Sbjct: 700 FDFLGEMINAGCQPTLQTYDVLIK 723
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 135/320 (42%), Gaps = 4/320 (1%)
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTY 117
+ S A L +MS G + + YN ++N+ + N ++D + + K+ P+ +Y
Sbjct: 379 RVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSY 438
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
N + + D E A + K + P ++Y+ + Y + A L+ M+
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
C+ + +Y+ L+S + + + ++ +MM N+ YT +IS K + +
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDC 558
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
A + + + + + N+L+ +N AE ++ + I P T+ +
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVIN 618
Query: 298 GYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
G G + LE F K + +P+ ++ L ++G ++ AE + L+ G
Sbjct: 619 GLCNNGAIPLALEMFNKMVK--HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL 676
Query: 358 VSTEI-YNSLLRTYAKAGKM 376
+ E+ Y ++ +GK+
Sbjct: 677 IPDEVTYVKMIEVCVMSGKV 696
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 23/313 (7%)
Query: 89 LYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
L +++ +D+ Q+L+E P+++ YN + A + AE ++ K+ + PD
Sbjct: 206 LNMTSTVMDRYHQILRE---GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPD 262
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+++ Y + + A M++ C N YS+L++ N G +E L
Sbjct: 263 TFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFIS 322
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M +T I +L +G E A I+ + + PN+ +
Sbjct: 323 EMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCK-----PNVYTYTSLISG 377
Query: 269 QL--EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
Q MA ++R+ G+ P T+ L ++ +++ L F + +P+
Sbjct: 378 QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFN--MMGKHGCLPN- 434
Query: 327 RLITAAYNKLEEQ----GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLII- 380
T++YN+L GD + A +L + T + YN +++ Y +G + I
Sbjct: 435 ---TSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIR 491
Query: 381 -VERMQKDNVQMD 392
+E M+ + Q D
Sbjct: 492 VLELMKANGCQPD 504
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQ-AQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQ 57
+E + +G Q SY + ++ + + F + D+ P+ T +AL+ Y +
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ-ELKKNTSPDVVT 116
++K A ++E+M G YN +++ ++ + L++ SPDVVT
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
Y+ + + A + F ++ K P+ +YS+L + E+A E++
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
K+ + V Y ++ + G D +M++ + Y +I L
Sbjct: 673 KQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 144/331 (43%), Gaps = 3/331 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ +++Q + +A ++++M E G YN ++ ++D+ L E+ +
Sbjct: 459 TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE 518
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N PD TY +++ + +A+K E+ + + P+ + + L + Y K +
Sbjct: 519 NGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIE 578
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + + M ++ + Y+ L++ G ++ I+ +M + Y +I
Sbjct: 579 ACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLID 638
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
KLG +KA +I+DE T + + N+LL + ++E A+ + + KG P
Sbjct: 639 GFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPP 698
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + GY K G + + + F + ++ VPD + T + D++ A
Sbjct: 699 NAVTYCTIIDGYCKSGDLAEAFQLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAIT 756
Query: 348 LLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 378
+ T S+ +N+L+ K GK L
Sbjct: 757 IFETNEKGCASSSAPFNALINWVFKFGKTEL 787
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F + K PD S L+ + + +A ++ ++M + G + YN +L
Sbjct: 615 EEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGG 674
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ +G+++K ++L E+ K P+ VTY + D A + F E+K + PD
Sbjct: 675 FCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPD 734
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG----YKDEVL 204
Y+TL ++ E+A T + EK C + +++L++ G D +
Sbjct: 735 SFVYTTLVDGCCRLNDVERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMIN 793
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
R+ F K ND Y +I L K G E A+ ++ + + LL Y
Sbjct: 794 RLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGY 853
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ S ++ ++ GI+P + ++ +LK+G K L
Sbjct: 854 DKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKAL 898
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 143/336 (42%), Gaps = 6/336 (1%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G ++L+ + + K + L+ ++ + + P Y + S+G LD ++
Sbjct: 384 GARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIV 443
Query: 104 QELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+E+ + P+VV Y + ++ A + E+++ I PD Y++L K
Sbjct: 444 KEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ ++A + L EM + + + Y + +S Y G + K+M+ N
Sbjct: 504 KKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC 563
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T +I+ K G+ +A + + GD + +L+ + ++ AE ++ +
Sbjct: 564 TGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRG 623
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQGD 341
KGI P ++ L G+ K G M+K F + + + V + ++ + + G+
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCR---SGE 680
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
I+ A+ LL + G + Y +++ Y K+G +
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDL 716
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 146/362 (40%), Gaps = 37/362 (10%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
L+ + K+ +A++L+ +M+ G + Y+ +++ + D ++ E+
Sbjct: 286 LIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHG 345
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
S D + Y+ ++ + + E A+ F + + P +Y++L + + + K
Sbjct: 346 FSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGY 405
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L E++KR + Y + + + G D I K+M + + N YT +I +
Sbjct: 406 ELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTF 465
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
++ F A + E D N L+ +++ A SF +V G KP
Sbjct: 466 LQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDA 525
Query: 290 TTWELLTWGYLKKGQ-------MEKVLEC---------------------FKKAIGSVRK 321
T+ GY++ G+ ++++LEC +A + R
Sbjct: 526 FTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRS 585
Query: 322 WV-----PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
V D + T N L + G ++ AE + +R G ++ ++ Y +L+ ++K G
Sbjct: 586 MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG-IAPDVFSYGTLIDGFSKLG 644
Query: 375 KM 376
M
Sbjct: 645 NM 646
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 82 PYNHMLNLYISNGQLDKVPQMLQEL-----KKNTSPDVVTYNLWLAACASQNDKETAEKA 136
P+N ++N G+ + M+ L K P+ VTYN+ + + + E A++
Sbjct: 771 PFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKEL 830
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
F ++K + P I+Y++L + Y KM + + E+ + + YS +++ +
Sbjct: 831 FHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLK 890
Query: 197 MGYKDEVLRIWKKMMSLFA-----KMNDAEYTCVISSLVKLGEFEKAENI 241
G + L + +M + A K++ + ++S K+GE E AE +
Sbjct: 891 EGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 940
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 115/310 (37%), Gaps = 60/310 (19%)
Query: 84 NHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFL---- 138
NH+L+ + +LD + + + ++N DV +Y + + A + + A+ L
Sbjct: 193 NHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEE 252
Query: 139 -------------ELKKT----KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
ELKK+ + P SY+ L K + E A + L EM
Sbjct: 253 ELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLF 312
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ VAYS L I L+K + A +
Sbjct: 313 ADNVAYSIL-----------------------------------IDGLLKGRNADAANGL 337
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
E S + DP + + + +E A++ ++ ++T G+ P + L G+ +
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVST 360
+ + K E + R V A + GD+DGA +++ + +G +
Sbjct: 398 EKNVRKGYELLVEI--KKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNV 455
Query: 361 EIYNSLLRTY 370
IY +L++T+
Sbjct: 456 VIYTTLIKTF 465
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 6/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ + + G +KV ++ E+ + + PD VTY+ ++A A N ++A + F E+
Sbjct: 191 YNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEM 250
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+TL +Y K+ E+A +KEM R C Y+ L+ G
Sbjct: 251 KENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRV 310
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ +K M+ K + +I+ L + A ++DE + ++ + N +
Sbjct: 311 EDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTI 370
Query: 261 LAAYIN-RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ + + L A S++ R+ GI P T+ +L GY K ++EK L ++
Sbjct: 371 IKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEM--DE 428
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + N L D A L L+ N G S +Y +++ + K G++
Sbjct: 429 KGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRL 486
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 7/233 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ Y + + +A L+E+M E GF CP Y ++N + D ++ QEL
Sbjct: 402 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQEL 461
Query: 107 KKN---TSPDVVTYNL-WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
K+N +S V + C N+ A F E+KK PD +Y+ L + ++
Sbjct: 462 KENCGCSSARVYAVMIKHFGKCGRLNE---AINLFNEMKKLGCTPDVYAYNALMTGMVRA 518
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
E ++A + + ME+ C + +++ +L+ G L ++ KM + K + +
Sbjct: 519 ERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSF 578
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
++ L + G FE+A + E S D + +L A + +M ES
Sbjct: 579 NTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVDDCKMVES 631
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 13/255 (5%)
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
S + + K ++ +A + +++ R CR Y+S++ + G+ ++V ++ +M S
Sbjct: 157 SEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCS 216
Query: 213 LFAKMND-AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
D Y+ +IS+ KL + A ++DE + ++ L+ Y ++E
Sbjct: 217 EVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVE 276
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A + + T+ L G K G++E +K + K PD L+
Sbjct: 277 EALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCK--PDVVLMNN 334
Query: 332 AYNKLEEQGDIDGAEHL---LVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIV----ERM 384
N L + A L + L A +V T YN+++++ +A K PL ERM
Sbjct: 335 LINILGRSNHLRDAIKLFDEMKLLNCAPNVVT--YNTIIKSLFEA-KAPLSEASSWFERM 391
Query: 385 QKDNVQMDAETQKVL 399
+KD + + T +L
Sbjct: 392 KKDGIVPSSFTYSIL 406
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 39/262 (14%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAAC-ASQNDKETAEKAFLELK 141
N+++N+ + L ++ E+K N +P+VVTYN + + ++ A F +K
Sbjct: 333 NNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMK 392
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT---------------------- 179
K I P +YS L Y K EKA L+EM+++
Sbjct: 393 KDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYD 452
Query: 180 --------------CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
C RV Y+ ++ + G +E + ++ +M L + Y +
Sbjct: 453 VANELFQELKENCGCSSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNAL 511
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ +V+ ++A +++ E T D NI+L + A + ++ I
Sbjct: 512 MTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTI 571
Query: 286 KPCYTTWELLTWGYLKKGQMEK 307
KP ++ + + G E+
Sbjct: 572 KPDVVSFNTILGCLSRAGLFEE 593
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 42/348 (12%)
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q ++K PD +TY + + + + A K + +P ++Y ++ + K++
Sbjct: 458 QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLD 517
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ +A + +M +R C ++SLLS Y + G +E ++ +M + + YT
Sbjct: 518 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYT 577
Query: 224 CVISSLVKLGEFEKAENIYD----------------------------------EWESIS 249
+I L G +A +++D E + S
Sbjct: 578 SLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKS 637
Query: 250 GTG-DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
G G D N L+ Y+ +++ A Y+R+V GIKP T+ +L G K G+ ++
Sbjct: 638 GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRA 697
Query: 309 LECFKKAIGSVRKWVPDHRL-ITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSL 366
FK+ + + VP + T + L + G + A + + G + Y SL
Sbjct: 698 FSLFKEMLE--KDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSL 755
Query: 367 LRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVLKITSEMPVSEVSS 412
+ + AKAG++P +VE M K V D + L IT + S V +
Sbjct: 756 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL-ITGLIDSSMVDT 802
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 163/366 (44%), Gaps = 24/366 (6%)
Query: 43 RGPD----TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
+GP+ T +++H + + EA+ ++ +M E G + +L+ Y+S G+ ++
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
Q+L E+ + +PDV+ Y + S A F + + PD ++Y T+
Sbjct: 557 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 616
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ K+ E A L+ M K + AY+SL+ Y + D+ ++ +M++ K
Sbjct: 617 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL----EMA 273
N + ++ L K G+ ++A +++ E VP L++ I + L ++
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLE-----KDEVPPTLVSYTILIDGLGKAGRVS 731
Query: 274 ESF--YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV--PDHRLI 329
E+F + ++ +GI P T+ L + K G++ + KK + + K PD +
Sbjct: 732 EAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA----KKLVEDMVKLGVNPDVQAY 787
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK-MPLIIVERMQKD 387
+A L + +D A + + G E+ Y L R + AG+ + L V++
Sbjct: 788 SALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQ 847
Query: 388 NVQMDA 393
V M+A
Sbjct: 848 GVAMEA 853
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 125/304 (41%), Gaps = 45/304 (14%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PDVV N+ L + A + FLE+ +P +SY+T+ S ++ ++A
Sbjct: 18 PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77
Query: 172 LKEMEKRTCRKNRVAYSSLLS---------------------------LYTNM------- 197
M C + +A+++L+ LYT++
Sbjct: 78 FNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKA 137
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G D +I ++M++ + A Y +I L KLG ++A +++ GD
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
L+ A N +L+ A Y ++ +G +P + L + K G++++ E ++
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV-- 255
Query: 318 SVRKWVPDHRLITAAYNKLEEQ----GDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
V K V R+ AYN L + G +D LL+ + + + YN L+ +++
Sbjct: 256 -VAKKVATSRV---AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSR 311
Query: 373 AGKM 376
A ++
Sbjct: 312 ANRL 315
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 136/347 (39%), Gaps = 13/347 (3%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF ++ D PD + L+H + + + L+ + + F Y +++ Y
Sbjct: 77 FFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFRPDVFLYTSVIHGYC 135
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G LD ++L+E L PD Y + + + A + F ++K+ D++
Sbjct: 136 KAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYV 195
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++ TL ++A +EM +R SL+ G DE I++ +
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV 255
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ + Y ++ KLG + + + D + NIL+A + N+L
Sbjct: 256 VAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRL 315
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A + L + G KP T+ + G +ME+ F +A+ + T
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVIS--------YT 367
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L + ID A L L+ AG + Y +++ KAG++
Sbjct: 368 TVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRI 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/381 (18%), Positives = 143/381 (37%), Gaps = 70/381 (18%)
Query: 81 LPYNHMLNLYISNGQLDK-VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +++ Y G++D + +LQ ++ + PD+ TYN+ +A + N + A + F
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKL 324
Query: 140 LKKTKIDP-----------------------------DWISYSTLTSLYIKMELPEKAAT 170
L P D ISY+T+ + ++A
Sbjct: 325 LSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACE 384
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
++++ C N VAY++++ G ++ L+ ++ M YT VI L
Sbjct: 385 LFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLC 444
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K A ++++ D L+ + ++++ A + ++TKG +P
Sbjct: 445 KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAV 504
Query: 291 TWELLTWG-----------------------------------YLKKGQMEKVLECFKKA 315
T+ + G YL KG+ E+ + +
Sbjct: 505 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 564
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ R PD L T+ + L G + A H+ ++ G + Y ++++ ++K G
Sbjct: 565 --TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 622
Query: 375 KMPLI--IVERMQKDNVQMDA 393
+ I+E M K V D
Sbjct: 623 NVEAAGEILELMAKSGVGPDC 643
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 118/294 (40%), Gaps = 48/294 (16%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F+++ +K PD T ++ ++ + A ++E M++ G YN +++ Y
Sbjct: 594 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 653
Query: 91 ISNGQLDKVPQML----QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKI 145
+ +L++V Q + + P+ VT+N+ + + A F E L+K ++
Sbjct: 654 V---KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P +SY+ L K +A + +EM R Y+SL
Sbjct: 711 PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSL--------------- 755
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
I SL K G +A+ + ++ + D + + L+ I
Sbjct: 756 --------------------IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLI 795
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEKVLECFKKAI 316
+ + ++ A + ++ +G P T+++L G+ G+ +E V + F + +
Sbjct: 796 DSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGV 849
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 117/307 (38%), Gaps = 41/307 (13%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A E+ T + PD ++ + + + K +KA EM C V+Y+++
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 191 LSLYTNMGYKDEVLRIWKKMMS---------------LFAKMNDAE-------------- 221
+S ++ DE + + M+ F K +
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121
Query: 222 -----YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
YT VI K G+ + I +E + D +L+ +++ A
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
+ R+ G Y T+ L G++++ E +++ I R + P + + L
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIE--RGYEPYLEVQDSLIFAL 239
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP---LIIVERMQKDNVQMD 392
+ G +D A + T+ ++ + YNSL+ Y K G++ ++++ ++ DN D
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP-D 298
Query: 393 AETQKVL 399
+T +L
Sbjct: 299 IQTYNIL 305
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 151/366 (41%), Gaps = 38/366 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ V + AE + E M + + YN M+ Y G+L K + +++
Sbjct: 220 TYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDM 279
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ KN PD +TY + AC S+ D +T +LE+++ ++ SYS + K
Sbjct: 280 EMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKC 339
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------------- 210
+A + M ++ CR N Y++L+ Y+ G +E +R++++M
Sbjct: 340 MEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVL 399
Query: 211 -------------MSLF-------AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
M LF +N Y +I L K G E AEN+++E
Sbjct: 400 VNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGC 459
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D N ++ A +++ A + + R+ +G T+ +L G K+ + E+ ++
Sbjct: 460 ARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIK 519
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTY 370
+ K I + P A L G + A +L L G + + ++ T
Sbjct: 520 FWDKMID--KGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTL 577
Query: 371 AKAGKM 376
KA ++
Sbjct: 578 CKAQRI 583
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 145/317 (45%), Gaps = 13/317 (4%)
Query: 92 SNGQLDKVPQML---QELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
S G L V ++L + +K+N P + TYN + + E+AEK F + KI P
Sbjct: 192 SFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVP 251
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL-SLYTNMGYKDEVLRI 206
D ++Y+ + Y K +KA ++ME + + +++ Y +L+ + Y+ + D L +
Sbjct: 252 DTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF-DTCLSL 310
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ +M ++ Y+ VI L K + +A +++ + + L+ +Y
Sbjct: 311 YLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSK 370
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+E A + R+ +G +P T+ +L G K G+++ +E F K V +
Sbjct: 371 NGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFC---RNKGVAIN 427
Query: 327 RLITAA-YNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVE 382
+ A+ + L + G I+ AE+L + G + YN+++ AK GK+ L +
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 487
Query: 383 RMQKDNVQMDAETQKVL 399
RM+++ T +L
Sbjct: 488 RMEEEGCDQTVYTFTIL 504
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 4/286 (1%)
Query: 42 MRGPDTCSALLHSYVQNKKSAE-AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
M G + +A+L + ++ K+S + AE + ++M E G YN ++ + + G L+
Sbjct: 164 MPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGL 223
Query: 101 QMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
E+++N P+VVTYN + A A K + ++P+ ISY+ + +
Sbjct: 224 XFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+ ++ + L+EM KR +RV +++L++ Y N+G + L + +M+ N
Sbjct: 284 CREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +I+S+ K G +A D+ + R L+ + + L+ A
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+V G P T+ L G+ G+ME ++ I R ++PD
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE--RGFIPD 447
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 137/307 (44%), Gaps = 4/307 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWL 121
E ++E+MS+ ++ + +N ++N Y + G + + E+ KN SP+VVTY +
Sbjct: 291 ETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLI 350
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + A + +++ + P+ +Y+TL + + ++A +KEM +
Sbjct: 351 NSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ Y++L++ + +G ++ + ++M+ + Y+ +IS + E EKA +
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
E + + D + L+ + +L + +++ G+ P T+ L Y
Sbjct: 471 KVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCI 530
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+G ++K L + I + + PD N +Q A+ LL+ L V E
Sbjct: 531 EGDLDKALRLHDEMIQ--KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Query: 362 I-YNSLL 367
I YN+L+
Sbjct: 589 ITYNTLI 595
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 149/332 (44%), Gaps = 24/332 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++S + A +++M + G Y +++ + G L + Q+++E+
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N +P ++TYN + E A E+ + PD +SYST+ S + + +
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA EM + + YSSL+ EV ++++M+SL ++ YT +
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I++ G+ +KA ++DE + D N+L+ + +++ + A+ +L+ +
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L +E FK A+ ++ + +G ++ A
Sbjct: 585 VPNEITYNTLID---NCNNLE-----FKSALALMKGFCM--------------KGLMNEA 622
Query: 346 EHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKM 376
+ +L ++ G+ ++ E+YN ++ ++K G +
Sbjct: 623 DRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 144/336 (42%), Gaps = 24/336 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM-LQE 105
T +AL++ + + +A L+++M E GF+ + Y+ +++ + N +L+K Q+ ++
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K SPDV TY+ + Q F E+ + PD ++Y++L + Y
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA EM ++ + V Y+ L++ + E R+ K++ + N+ Y +
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + L EF+ A L+ + + + A+ ++ KG
Sbjct: 595 IDNCNNL-EFKSAL-------------------ALMKGFCMKGLMNEADRVLESMLQKGY 634
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG-DIDG 344
K + ++ G+ K G +EK +K+ + S + P I A L +G +++
Sbjct: 635 KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS--GFAPHSVTIMALAKSLYHEGKEVEL 692
Query: 345 AEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLII 380
+ L TL++ + L+ +K G M +
Sbjct: 693 NQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVF 728
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 10/299 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y QL+K + L+ P TY L L A + AE E++
Sbjct: 190 YNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQ 249
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P Y+ +K KA + M+K CR N Y+ ++++Y
Sbjct: 250 EHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPM 309
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++I+ +M S+ K N YT ++++ + G EKAE ++++ + D N L+
Sbjct: 310 SAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALM 369
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGS 318
AY + A ++ + G +P ++ +L Y + G + E E K+
Sbjct: 370 EAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQ--G 427
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ + H L+ +A+ + G++ E ++ L +G T N++L YA+AG++
Sbjct: 428 MAPTMKSHMLLLSAHAR---SGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRL 483
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 157/380 (41%), Gaps = 16/380 (4%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + AE ++ +M E G YN L+ + K ++ Q
Sbjct: 223 DTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQR 282
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KK + TY L + +A K F E++ + +Y+ L + + + L
Sbjct: 283 MKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGL 342
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA ++M++ + AY++L+ Y+ G+ I+ M + + + A Y
Sbjct: 343 CEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNI 402
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G +AE ++ + + +LL+A+ + E +L G
Sbjct: 403 LVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSG 462
Query: 285 IKPCYTTWELLTWGYLKKGQ---MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
++P + Y + G+ ME++L A GS V H + AY + G
Sbjct: 463 LRPDTFALNAMLHAYARAGRLDDMERLLAAMDLA-GSAD--VGSHNVAVNAYARAGYLGR 519
Query: 342 IDGA-EHLLVTLRNAGHVSTEI--YNSLLRTYAKA---GKMPLIIVERMQKDNVQMDAET 395
++ A E + G + ++ + S + YA+ GK L I E M DA T
Sbjct: 520 MEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKC-LEIFEEMVDAGCYPDAGT 578
Query: 396 QKVL--KITSEMPVSEVSSI 413
KVL + E V +V++I
Sbjct: 579 AKVLMAACSDERQVEQVAAI 598
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 7/167 (4%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPDTCSA--LLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A R E FE+L + P S LL ++ ++ E +M ++ + G
Sbjct: 406 AYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRP 465
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
N ML+ Y G+LD + ++L + S DV ++N+ + A A E AF
Sbjct: 466 DTFALNAMLHAYARAGRLDDMERLLAAMDLAGSADVGSHNVAVNAYARAGYLGRMEAAFE 525
Query: 139 ELKKTK-----IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+++ K ID D +S+++ Y + + K +EM C
Sbjct: 526 GIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVDAGC 572
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 4/328 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELK 107
+A++ + + + A ++ +M GFL + YN M+ + +L ++L Q L
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P V+TY + + A + A K E+ + PD +Y+ + K + E+
Sbjct: 201 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVER 260
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
AA + + + C+ + ++Y+ LL + N G DE ++ +M S + N Y+ +IS
Sbjct: 261 AAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 320
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
SL + G ++A ++ T D + L++A +L++A + +++ G P
Sbjct: 321 SLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLP 380
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ + K G + LE F K G P+ + L GD A
Sbjct: 381 DIVNYNTILAALCKNGNANQALEIFNKLRG--MGCPPNVSSYNTMISALWSCGDRSRALG 438
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
++ + + G EI YNSL+ + G
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDG 466
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + EA L+E+M G L YN ++ G +++ +++ L
Sbjct: 209 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 268
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K PDV++YN+ L A +Q + EK E+ +P+ ++YS L S +
Sbjct: 269 TSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 328
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + LK M ++ + +Y L+S G D + I M+S + Y +
Sbjct: 329 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 388
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++L K G +A I+++ + + N +++A + A +++KG+
Sbjct: 389 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGV 448
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ L + G +E+ +
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEAI 472
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 139/325 (42%), Gaps = 3/325 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL+ + K E+ +E + G+ + ++ + + ++K ++++ L+ +T
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV YN ++ N E A + +K PD ++Y+ + A
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
L ++ C + Y+ L+ G +E +++ ++M++ + Y +I +
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G E+A + S D NILL A++N+ + + E + ++G +P
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T+ +L + G++++ + K I ++ PD + L ++G +D A ++
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIE--KELTPDTYSYDPLISALCKEGRLDLAIGIMD 371
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAG 374
+ + G + + YN++L K G
Sbjct: 372 YMISNGCLPDIVNYNTILAALCKNG 396
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+ + RA E +L K PD S LL +++ K E E L+ +M G +
Sbjct: 255 EGMVERAAE-LITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313
Query: 82 PYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
Y+ +++ G++D+ +L+ ++K +PD +Y+ ++A + + A +
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
PD ++Y+T+ + K +A ++ C N +Y++++S + G +
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-NI 259
L + M+S ++ Y +IS L + G E+A + D+ E SG + NI
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ-SGFRPTVISYNI 492
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+L +++ A + ++ KG +P TT+ LL G
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 531
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 117/275 (42%), Gaps = 3/275 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +A++ + A L+ ++ G + YN +L +++ G+ D+ ++
Sbjct: 240 PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKL 299
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ E+ + P+ VTY++ +++ + A + + ++ PD SY L S K
Sbjct: 300 VAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCK 359
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A + M C + V Y+++L+ G ++ L I+ K+ + N +
Sbjct: 360 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSS 419
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +IS+L G+ +A + S D N L++ +E A + +
Sbjct: 420 YNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDME 479
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
G +P ++ ++ G K +++ + F + I
Sbjct: 480 QSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMI 514
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT S L+ + + + A +M+ M G L + YN +L NG ++ ++
Sbjct: 345 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEI 404
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+L+ P+V +YN ++A S D+ A + +DPD I+Y++L S +
Sbjct: 405 FNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCR 464
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
L E+A L +ME+ R ++Y+ +L + D+ + ++ +M+ + N+
Sbjct: 465 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 524
Query: 222 YTCVISSL 229
Y +I +
Sbjct: 525 YILLIEGI 532
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQ----LDKVPQ 101
+ +L + +N + +A + K+ G CP YN M++ S G L VP
Sbjct: 386 NTILAALCKNGNANQALEIFNKLRGMG---CPPNVSSYNTMISALWSCGDRSRALGMVPA 442
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M+ K PD +TYN ++ E A +++++ P ISY+ + K
Sbjct: 443 MIS---KGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 499
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ + A EM ++ CR N Y L+ G++ E + + + S
Sbjct: 500 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 550
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 129/301 (42%), Gaps = 10/301 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ +Y ++ + E E + +M G +N +++ Y Q + V ++L E++
Sbjct: 372 NTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQD 431
Query: 109 -NTSPDVVTYNLWLAACASQND-KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
PD +Y ++A QN + A AFL +KK I P SY+ L Y E
Sbjct: 432 AGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHE 491
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA +T + M+ + + Y++LL + G ++RIWK MMS + + ++
Sbjct: 492 KAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILL 551
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
K G + +A ++ E+ + N+L+ AY Q + T +K
Sbjct: 552 DGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMATLNLK 611
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH------RLITAAYNKLEEQG 340
P T+ + + Y++ + K + S + VPD R I A +K++ +
Sbjct: 612 PDSITYLTMIYAYIRVRDFRRAFFYHKTMVKSGQ--VPDAKSYEKLRAILEAKSKIKNRK 669
Query: 341 D 341
D
Sbjct: 670 D 670
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 140/361 (38%), Gaps = 49/361 (13%)
Query: 45 PD--TCSALLHSYVQNKKSA-EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
PD TCS ++ +N +SA EA EKM+ G P ++ + G ++
Sbjct: 295 PDHVTCSIMITMMRKNGRSAKEAWEFFEKMNRKGVKWSPEILGALVKSFCDEGLKNEALI 354
Query: 102 MLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ E+ KK + + YN + A N E E F E+K + P +++ L Y
Sbjct: 355 IQVEMAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYS 414
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG-YKDEVLRIWKKMMSLFAKMND 219
+ PE L EM+ + + +Y+ L+S Y D + +M + K
Sbjct: 415 RRMQPEIVEELLLEMQDAGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTS 474
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +I + G EKA Y +E++
Sbjct: 475 HSYTALIHAYSVSGWHEKA---YSTFENMQ------------------------------ 501
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL-ITAAYNKLEE 338
T+GIKP T+ L + + G + ++ +K + + V R+ + +
Sbjct: 502 --TEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMS---EKVEGTRVTFNILLDGFAK 556
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG---KMPLIIVERMQKDNVQMDAE 394
QG A ++ G H + YN L+ YA+ G K+P ++ E M N++ D+
Sbjct: 557 QGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE-MATLNLKPDSI 615
Query: 395 T 395
T
Sbjct: 616 T 616
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 8/286 (2%)
Query: 94 GQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G+ D++ + L +N DV YN L+ + A K + ++ + PD ++
Sbjct: 241 GKGDELMVLFMNLPQNKEFRDVHVYNASLSGLLYCQRYDDACKVYEAMEAQNVSPDHVTC 300
Query: 153 STLTSLYIKMELPEKAA-TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
S + ++ K K A ++M ++ + + +L+ + + G K+E L I +M
Sbjct: 301 SIMITMMRKNGRSAKEAWEFFEKMNRKGVKWSPEILGALVKSFCDEGLKNEALIIQVEMA 360
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
A N Y ++ + K + E+ E I+ E ++ NIL+ AY R Q E
Sbjct: 361 KKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPE 420
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLI 329
+ E + G++P ++ L Y G+ K+ + A ++K P
Sbjct: 421 IVEELLLEMQDAGLQPDAKSYTCLISAY---GRQNKMTDMAANAFLRMKKVGIKPTSHSY 477
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
TA + G + A ++ G S E Y +LL + ++G
Sbjct: 478 TALIHAYSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSG 523
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + + EA ++ + + G + YN ++N Y GQ K+PQ+L+E+
Sbjct: 546 TFNILLDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 605
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
N PD +TY + A D A + K+ PD SY L ++
Sbjct: 606 ATLNLKPDSITYLTMIYAYIRVRDFRRAFFYHKTMVKSGQVPDAKSYEKLRAI 658
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 41/335 (12%)
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q ++K PD +TY + + + + A K + +P ++Y ++ + K++
Sbjct: 203 QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLD 262
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ +A + +M +R C ++SLLS Y + G +E ++ +M + + YT
Sbjct: 263 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYT 322
Query: 224 CVISSLVKLGEFEKAENIYD----------------------------------EWESIS 249
+I L G +A +++D E + S
Sbjct: 323 SLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKS 382
Query: 250 GTG-DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
G G D N L+ Y+ +++ A Y+R+V GIKP T+ +L G K G+ ++
Sbjct: 383 GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRA 442
Query: 309 LECFKKAIGSVRKWVPDHRL-ITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSL 366
FK+ + ++ VP + T + L + G + A + + G + Y SL
Sbjct: 443 FSLFKEML--EKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSL 500
Query: 367 LRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
+ + AKAG++P +VE M K V D + L
Sbjct: 501 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 163/366 (44%), Gaps = 24/366 (6%)
Query: 43 RGPD----TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
+GP+ T +++H + + EA+ ++ +M E G + +L+ Y+S G+ ++
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
Q+L E+ + +PDV+ Y + S A F + + PD ++Y T+
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 361
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ K+ E A L+ M K + AY+SL+ Y + D+ ++ +M++ K
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL----EMA 273
N + ++ L K G+ ++A +++ E VP L++ I + L ++
Sbjct: 422 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLE-----KEEVPPTLVSYTILIDGLGKAGRVS 476
Query: 274 ESF--YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV--PDHRLI 329
E+F + ++ +GI P T+ L + K G++ + KK + + K PD +
Sbjct: 477 EAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA----KKLVEDMVKLGVNPDVQAY 532
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK-MPLIIVERMQKD 387
+A L + +D A + + G E+ Y L R + AG+ + L V++
Sbjct: 533 SALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQ 592
Query: 388 NVQMDA 393
V M+A
Sbjct: 593 GVAMEA 598
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 132/350 (37%), Gaps = 43/350 (12%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
+ + +++ + GQ ++L + K PDV Y + D +T +
Sbjct: 43 IAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRA 99
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K D ISY+T+ + ++A +E++ C N VAY++++ G
Sbjct: 100 VTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRI 159
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ L+ +++M YT VI L K A ++++ D L
Sbjct: 160 EDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTL 219
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG---------------------- 298
+ + ++++ A + ++TKG +P T+ + G
Sbjct: 220 IDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC 279
Query: 299 -------------YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
YL KG+ E+ + + + R PD L T+ + L G + A
Sbjct: 280 EPGLFIFTSLLSYYLSKGRAEEAYQVLTEM--TARGCAPDVILYTSLIDLLFSTGRVPEA 337
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMD 392
H+ ++ G + Y ++++ ++K G + I+E M K V D
Sbjct: 338 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 110/262 (41%), Gaps = 7/262 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P +V+YN ++ AS + + A K F + +PD I+++TL + K P+
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L + KR R + Y+S++ Y G D + + ++ A ++ YT VI L
Sbjct: 65 LNQALKRF-RPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKGLAD 120
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
++A +++E ++ + + ++ + ++E + + P TT
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ ++ G K + + F++ + + VPD T + + +D A LL
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMV--QKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 238
Query: 352 LRNAGHVSTEI-YNSLLRTYAK 372
+ G T + Y S++ + K
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCK 260
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 95/219 (43%), Gaps = 10/219 (4%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F+++ +K PD T ++ ++ + A ++E M++ G YN +++ Y
Sbjct: 339 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 398
Query: 91 ISNGQLDKVPQML----QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKI 145
+ +L++V Q + + P+ VT+N+ + + A F E L+K ++
Sbjct: 399 V---KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEV 455
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P +SY+ L K +A +EM R Y+SL+ G E +
Sbjct: 456 PPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 515
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
+ + M+ L + Y+ +I+ L+ + A +++ E
Sbjct: 516 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 554
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 142/327 (43%), Gaps = 6/327 (1%)
Query: 26 LQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
L T A E F + ++ P+ T S++LH + +S EA +L ++M E + + +
Sbjct: 132 LITEAME-FLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTF 190
Query: 84 NHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N +++ G + + + + + +K P+V TYN + SQ+ + A+K F + +
Sbjct: 191 NILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR 250
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P SY+ L + K ++A L EM + + V YS+L+ + G +
Sbjct: 251 KGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQD 310
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
++ ++M S + Y+ V+ L K G ++A + + + + IL+
Sbjct: 311 AQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQ 370
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
N +LE A ++ L KGI+P T+ ++ G LK G + E F+ +V
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDM--AVHGC 428
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLL 349
+P+ GD A L+
Sbjct: 429 LPNSCTYNVIIQGFLRNGDTSNAGRLI 455
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P+ VT++ L +S+ A K F E+ K +PD I+YST+ + KM
Sbjct: 39 FKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGST 98
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A LK+ME++ C+ N V YS+++ E + +M++ N Y+ +
Sbjct: 99 TMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSI 158
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ LG +A +++ + + D NIL+ + A+ + ++ KG+
Sbjct: 159 LHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLITAAYNKLEEQGDIDG 344
+P T+ L GY + QM++ + F VRK P R + G ID
Sbjct: 219 EPNVNTYNALMDGYCSQSQMDEAQKLFNIM---VRKGCAPSVRSYNILIKGHCKSGRIDE 275
Query: 345 AEHLLVTLRN-AGHVSTEIYNSLLRTYAKAGK 375
A+ LL + + A T Y++L++ + + G+
Sbjct: 276 AKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 143/317 (45%), Gaps = 8/317 (2%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLA 122
A +++ M + G + ++ +LN S ++ ++ E+ K PDV+TY+ +
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
A + ++++ P+ + YST+ K +L +A L EM R
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N V YSS+L + N+G +E ++K+M+ + + ++ L K G +A+ ++
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210
Query: 243 DEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ I +P V N L+ Y +++Q++ A+ +N +V KG P ++ +L G+
Sbjct: 211 ETM--IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
K G++++ + S + PD + + G A+ LL +R+ G +
Sbjct: 269 KSGRIDEAKGLLAEM--SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326
Query: 361 EI-YNSLLRTYAKAGKM 376
+ Y+ +L K G +
Sbjct: 327 LMTYSIVLDGLCKQGHL 343
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 114/265 (43%), Gaps = 3/265 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + +K P+ T +AL+ Y + EA+ L M G YN ++ +
Sbjct: 210 FETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCK 269
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+G++D+ +L E+ K +PD VTY+ + + A+K E++ + PD ++
Sbjct: 270 SGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMT 329
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS + K ++A LK M++ N Y+ L+ N G + ++ +
Sbjct: 330 YSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLF 389
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + YT +IS L+K G +A ++ + + N+++ ++
Sbjct: 390 VKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTS 449
Query: 272 MAESFYNRLVTKGIKPCYTTWELLT 296
A +V +G +T+++L+
Sbjct: 450 NAGRLIEEMVGRGFSADSSTFQMLS 474
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 132/315 (41%), Gaps = 5/315 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S +++ + + A L++KM E G + Y+ +++ + + + +
Sbjct: 80 PDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEF 139
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E+ + SP+VVTY+ L + A F ++ + + PD ++++ L K
Sbjct: 140 LSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK 199
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +A + M ++ N Y++L+ Y + DE +++ M+ +
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I K G ++A+ + E + T D + L+ + + + A+ +
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ G+ P T+ ++ G K+G +++ E K S K P+ + T + G
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQES--KIEPNIFIYTILIQGMCNFGK 377
Query: 342 IDGAEHLLVTLRNAG 356
++ A L L G
Sbjct: 378 LEAARELFSNLFVKG 392
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 56/339 (16%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +LN G +D++ Q+ E L+ P++ TYN + + E A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ +DPD+ +Y++L Y + + + A KEM + CR+N VAY+ L+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC------ 299
Query: 202 EVLRIWKKMMSLFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
V R + M LF KM D + YT +I +L +A N+ E E +
Sbjct: 300 -VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNI 358
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK- 313
+L+ + ++ +LE A +++ KG+ P T+ L GY K+G +E L+ +
Sbjct: 359 HTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVEL 418
Query: 314 --------------------------KAIGSV-----RKWVPDHRLITAAYNKLEE---- 338
KA+G + RK +PD YN L +
Sbjct: 419 MESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPD----VVTYNSLIDGQCR 474
Query: 339 QGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
G+ D A LL + + G V Y S++ + K+ ++
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRV 513
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 20/290 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T +AL+H + K EA L EKM + +++ + +G D + Q+
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L T PD TY ++ + + AE ++K+ + PD +YS+L Y +
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLL------------------SLYTNMGYKDEVLRIW 207
A LK M C ++ + SL+ + +NM D V+ +
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELL 748
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR-VPNILLAAYIN 266
+KM+ N Y ++ + ++G AE ++D + G V N LL+
Sbjct: 749 EKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCK 808
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ A + ++ G P + ++L KKG+ E+ F+ +
Sbjct: 809 LEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLL 858
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 146/347 (42%), Gaps = 15/347 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ S K +A L+ +M E G + + YN ++N Y G ++ +++ +
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT---KIDPDWISYSTLTSLYIKM 162
+ +N P+ TYN + +N KA L K K+ PD ++Y++L +
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKRN----VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ A L M R + Y+S++ +E ++ + N Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T +I K G+ +A + ++ S + + N L+ +L+ A ++V
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK 595
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
++P +T +L LK G + F++ + S K PD T +G +
Sbjct: 596 IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK--PDAHTYTTFIQTYCREGRL 653
Query: 343 DGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQ 385
AE ++ ++ G VS ++ Y+SL++ Y G+ ++++RM
Sbjct: 654 QDAEDMVAKMKENG-VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH 699
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 127/317 (40%), Gaps = 5/317 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
+A ++ KM E L + YN +++ +G D ++L + + PD TY +
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ E A F L++ + P+ + Y+ L Y K +A L++M + C
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL 564
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N + +++L+ G E + +KM+ + + + T +I L+K G+F+ A
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ + S D + Y +L+ AE ++ G+ P T+ L GY
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE-EQGDIDGAEHLLVTLRNAGHVST 360
G+ K+ + H ++ + LE + G + G E + + N +
Sbjct: 685 LGRTNSAFVVLKR-MHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNM--MEF 741
Query: 361 EIYNSLLRTYAKAGKMP 377
+I LL + G P
Sbjct: 742 DIVVELLEKMVEHGVTP 758
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 160/390 (41%), Gaps = 50/390 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ L+H ++ EA L KM + Y ++ + + + +++E++
Sbjct: 292 THLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEE 351
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K P++ TY + + + SQ E A + ++ + + P+ I+Y+ L + Y K + E
Sbjct: 352 KGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTN------MGYKDEVL--RIWKKMMS------- 212
A ++ ME R R N Y+ L+ Y MG +++L ++ +++
Sbjct: 412 ALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 213 ------------LFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
L + MND YT +I SL K E+A +++D E
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQ-----K 526
Query: 254 PRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
+PN+ L+ Y ++ A ++++K P T+ L G G++++
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLL 367
+K + P T ++L + GD D A + ++G Y + +
Sbjct: 587 TLLEEKMVKI--DLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Query: 368 RTYAKAGKMPLI--IVERMQKDNVQMDAET 395
+TY + G++ +V +M+++ V D T
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFT 674
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 140/350 (40%), Gaps = 44/350 (12%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L+ Y Q K A + ++M G + + Y H+++ ++D+ +
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDL 310
Query: 103 LQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++K + P V TY + + A K A E+++ I P+ +Y+ L
Sbjct: 311 FVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCS 370
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
EKA L +M ++ N + Y++L++ Y
Sbjct: 371 QCKLEKARELLGQMLEKGLMPNVITYNALINGYC-------------------------- 404
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
K G E A ++ + ES + + R N L+ Y RN + A N+++
Sbjct: 405 ---------KRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKML 454
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ + P T+ L G + G + ++ + R VPD T+ + L +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL--SLMNDRGLVPDPWTYTSMIDSLCKSKR 512
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDN 388
++ A L +L + + Y +L+ Y KAGK+ +++E+M N
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKN 562
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCR-KNRV-AYSSLLSLYTNMGYKDEVLRIW 207
IS S ++SL+ ++L K A + R K+ V +Y+SLL+L N GY V +I
Sbjct: 88 ISPSHVSSLF-SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 208 KKMM--------SLFA-----KMNDAE------------YTCVISSLVKLGEFEKAENIY 242
M+ +LF KMN E Y +++SL + G ++ + +Y
Sbjct: 147 LLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 243 DEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
E D PNI ++ Y +E A + + +V G+ P + T+ L
Sbjct: 207 MEMLE-----DKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIM 261
Query: 298 GYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
GY ++ ++ + FK+ G R V LI + L + ID A L V +++
Sbjct: 262 GYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLI----HGLCVERRIDEAMDLFVKMKDD 317
Query: 356 G-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ + Y L++ + + L +V+ M++ ++ + T VL
Sbjct: 318 DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 143/346 (41%), Gaps = 6/346 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F+N+ R P +C++LL + VQN ++ +A + E+M G L Y M+N Y
Sbjct: 209 FDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCK 268
Query: 93 NGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D+ ++E++++ P+VVTYN + S D A+K + + I + +
Sbjct: 269 EGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRT 328
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L Y K E+A M ++ + Y L+ Y G D+ LRI M+
Sbjct: 329 YTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML 388
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ KMN +I+ KLG KA + + + D N LL + +
Sbjct: 389 KVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFI 448
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A + + KG+ T+ L G +E L + + R P+
Sbjct: 449 KAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN--LMHKRGVAPNEVTYCT 506
Query: 332 AYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+ + G D A + + G S +YN+++ + K K+
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKL 552
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 47/338 (13%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P +L Y + + A + + M +CG + N +L+ + NG+
Sbjct: 186 PTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGE--------- 236
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFL---ELKKTKIDPDWISYSTLTSLYIK 161
A KA L ++ I PD SY+ + + Y K
Sbjct: 237 ----------------------------AFKALLVYEQMIALGILPDIFSYTIMVNAYCK 268
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A +KEME+ C N V Y+SL+ Y ++G ++ M N
Sbjct: 269 EGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRT 328
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT +I K G+ E+AE ++ + D V +L+ AY +++ A + ++
Sbjct: 329 YTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML 388
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW--VPDHRLITAAYNKLEEQ 339
G+K L GY K G + K E + S++ W PD + +Q
Sbjct: 389 KVGLKMNTVICNSLINGYCKLGHVNKAAE----VLVSMKDWNLKPDSYGYNTLLDGFCKQ 444
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
D A L + N G + + YN+LL+ G +
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHV 482
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 36 ENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
+ +P+ R T + L+ Y + + +AE L M E Y +++ Y + G+
Sbjct: 320 KGIPENSR---TYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGR 376
Query: 96 LDKVPQ----MLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+D + ML+ LK NT V+ +L C + + AE + +K + PD
Sbjct: 377 VDDALRIRDAMLKVGLKMNT---VICNSLINGYCKLGHVNKAAE-VLVSMKDWNLKPDSY 432
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+TL + K E KA EM + V Y++LL ++G+ + L IW M
Sbjct: 433 GYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM 492
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
N+ Y ++ + K+G F++A I+ + S T + N ++ + +L
Sbjct: 493 HKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKL 552
Query: 271 EMAESFY 277
A+ +
Sbjct: 553 VQAQEIF 559
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 156/355 (43%), Gaps = 8/355 (2%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQML 103
P V+ +EA L++K+ G + N L+ +N + ++ ++
Sbjct: 190 PIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF 249
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E S + +YN+ + + + A + +++ PD +SYST+ Y +
Sbjct: 250 CEY--GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+KA + +M+ + + NR Y+S++ L +G E ++ ++MMS ++ YT
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I KLG A +DE S + D L+ + ++ ++ ++ ++++
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+KP T+ L Y K G+M + + P+ A + L + G++D
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQ--MGMTPNIVTYGALIDGLCKHGELD 485
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
A LL +R G ++ IYNS++ KAG + + +++ M+ + DA T
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 134/315 (42%), Gaps = 5/315 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+N F + + PD T + L+ Y + + A +L +M + G + Y +++
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+G+LD ++L E+ KK +V YN + + E A K E++ IDPD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I+Y+T+ Y ++ +KA L+EM R + V ++ L++ + +G ++ R+
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+ + Y ++ IY + D NIL+ +
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
L+ A Y ++ KG P T++ L + KK ++ + E F++ G V D +
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG--HGLVADGEI 715
Query: 329 ITAAYNKLEEQGDID 343
+ E+GD++
Sbjct: 716 YNFFVDMCYEEGDVE 730
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 130/322 (40%), Gaps = 16/322 (4%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYN 118
KS EAE ++ +M + + Y +++ + G + + E L K SPD +TY
Sbjct: 343 KSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYT 402
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + F E+ + PD ++Y+TL +Y K A + EM +
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
N V Y +L+ G D + +M ++N Y +++ + K G E+A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E E D ++ AY ++ A ++ +G++P T+ +L G
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582
Query: 299 YLKKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQ----GDIDGAEHLLVTL 352
+ G +E + +G + + VPD YN L +Q ++ + +
Sbjct: 583 FCMLGMLEDG----DRLLGWMLEKGIVPD----AITYNTLMKQHCIRNSMNTTTKIYKRM 634
Query: 353 RNAGHV-STEIYNSLLRTYAKA 373
RN G + YN L++ + KA
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKA 656
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 16/350 (4%)
Query: 34 FFENLPDKMRGPDTC----SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FFE+L K RG C +ALL + + EA ++++M E G + YN +
Sbjct: 280 FFEDL--KSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGS 337
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G ++ + L + K P+ TYN + A + + A F +KK P
Sbjct: 338 YARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPY 397
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y+ + + K L EM + C NRV ++++L++ G + V R+ +
Sbjct: 398 VNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLE 457
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M S ++ + +IS+ + G A +YDE + T N LL+ +
Sbjct: 458 RMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQG 517
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSV-RKWVPD 325
A+S N++ +G KP ++ LL + K G + E +K + G+V WV
Sbjct: 518 DWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGI-EAIEKEVYEGTVFPSWVIL 576
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
L+ + + ++G E + GH I+NS+L YAK G
Sbjct: 577 RTLVISNFKCRR----LEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNG 622
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 149/378 (39%), Gaps = 44/378 (11%)
Query: 38 LPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
LP G D + +LH+ + A L ++ G + YN ML++Y G+
Sbjct: 178 LPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGR 237
Query: 96 -LDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
++ ML+E++ PD T + +AAC + A F +LK P ++Y+
Sbjct: 238 SWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYN 297
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
L ++ K +A LKEME+ C+ + V Y+ L Y G+ +E + M+S
Sbjct: 298 ALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSK 357
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEW---------------------------- 245
N Y ++++ G+ ++A ++D W
Sbjct: 358 GILPNAFTYNTIMTAYGNAGKVDEALALFD-WMKKNGFIPYVNTYNLILGMLGKKSRFNV 416
Query: 246 -------ESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
S SG RV N +LA R R+ + G++ C T+ L
Sbjct: 417 MLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLIS 476
Query: 298 GYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
Y + G + + + + + P A + L QGD A+ ++ ++N G
Sbjct: 477 AYGRCGSRANAFKMYDEMTAA--GFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGF 534
Query: 358 VSTEI-YNSLLRTYAKAG 374
++ Y+ LL+ +AK G
Sbjct: 535 KPNDMSYSLLLQCHAKGG 552
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ML++Y NG K +M +K+ SPD++TYN + A N+ AEK LK
Sbjct: 611 FNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLK 670
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+++ PD +SY+T+ + + K L ++A L EM R V Y +L+ Y +
Sbjct: 671 TSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFS 730
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E + M+ + Y V+ S K F++A E D ++ + L
Sbjct: 731 EAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTLT 790
Query: 262 A 262
A
Sbjct: 791 A 791
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 109/258 (42%), Gaps = 1/258 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ +Y + A A + ++M+ GF C YN +L++ G ++ +
Sbjct: 469 DTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINK 528
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K + P+ ++Y+L L A + E E+ + + P W+ TL K
Sbjct: 529 MKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRR 588
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E +E+ R + + V ++S+LS+Y G + ++ + + Y
Sbjct: 589 LEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNS 648
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ K E +AE I ++ D N ++ + + ++ A+ + ++ G
Sbjct: 649 MMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADG 708
Query: 285 IKPCYTTWELLTWGYLKK 302
++PC T+ L GY +
Sbjct: 709 VRPCVVTYHTLVGGYASR 726
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 2/273 (0%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACA 125
++E+M CG C +N +++ Y G +M E+ +P + TYN L+ +
Sbjct: 455 VLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLS 514
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
Q D A+ ++K P+ +SYS L + K KE+ + T + V
Sbjct: 515 RQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWV 574
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
+L+ + + R ++++M+ K + + ++S K G + KA ++D
Sbjct: 575 ILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSI 634
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + D N ++ Y N+ AE RL T +KP ++ + G+ K+G +
Sbjct: 635 KQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLI 694
Query: 306 EKVLECFKKAIG-SVRKWVPDHRLITAAYNKLE 337
++ + I VR V + + Y E
Sbjct: 695 KEAQRILSEMIADGVRPCVVTYHTLVGGYASRE 727
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 16/317 (5%)
Query: 94 GQLDKVPQMLQEL----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
GQ D V +L E+ + DV Y L A + + E A + F ELK+ + P
Sbjct: 163 GQHDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTH 222
Query: 150 ISYSTLTSLYIKM--ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
+ Y+ + +Y +M P+ A L+EM + S++++ G DE + +
Sbjct: 223 VMYNVMLDVYGRMGRSWPQIVA-MLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFF 281
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+ + S Y ++ K G + +A + E E D N L +Y
Sbjct: 282 EDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARA 341
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPD 325
E A + +V+KGI P T+ + Y G++++ L F K G + +V
Sbjct: 342 GFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFI-PYVNT 400
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVE 382
+ LI K + + +L + +G + +N++L K G + ++E
Sbjct: 401 YNLILGMLGK---KSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLE 457
Query: 383 RMQKDNVQMDAETQKVL 399
RM+ V++ +T L
Sbjct: 458 RMKSCGVELCRDTFNTL 474
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
AQ++ + + F+ P+ M + S LL + + +A EA+ +++ E
Sbjct: 522 AQSIINKMKNEGFK--PNDM----SYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFP---S 572
Query: 83 YNHMLNLYISN---GQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+ + L ISN +L+ + + QE + + PD+V +N L+ A A + F
Sbjct: 573 WVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFD 632
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+K+ + PD I+Y+++ +Y K +A LK ++ + + V+Y+++++ + G
Sbjct: 633 SIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQG 692
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
E RI +M++ D CV++ +G + E + E +S
Sbjct: 693 LIKEAQRILSEMIA------DGVRPCVVTYHTLVGGYASREMFSEAREVVS 737
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 157/353 (44%), Gaps = 16/353 (4%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F + DK P+ T + L++ +A L+++M E GF+ + YN +LN Y
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK---ID 146
G+ +++ + K DV TYN+++ + + + KA+L LKK + I
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNH---RSAKAYLLLKKMRKEMIS 335
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ ++Y+TL + ++K AA EM K N V Y++L+ + ++G +E LR+
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
M + ++N+ Y +++ L K +FE A+ + + +L+
Sbjct: 396 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 455
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
L+ A + G+ P T+ L G+ + G ++ E + R + +
Sbjct: 456 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM---YRSGLVLN 512
Query: 327 RLI--TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++I T YN + G++ A + + GH + N L+ + + GK+
Sbjct: 513 KIIYSTLIYN-FCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 564
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 145/334 (43%), Gaps = 8/334 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC+ +L S V++K++ +L +MS+ G +N ++N G L K +L+++
Sbjct: 200 TCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM 259
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++N P +VTYN L + + A + + I+ D +Y+
Sbjct: 260 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRS 319
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA LK+M K N V Y++L++ + G +++ +M N Y +
Sbjct: 320 AKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 379
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I +G+FE+A + D E+ + LL + E+A+ R+ +
Sbjct: 380 IGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 439
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDID 343
+ + +L G K G +++ ++ +G++ K PD ++ N G+I
Sbjct: 440 VVGHIAYTVLIDGLCKNGMLDEAVQ----LVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495
Query: 344 GAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
A+ ++ + +G V + IY++L+ + + G +
Sbjct: 496 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 529
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 155/395 (39%), Gaps = 43/395 (10%)
Query: 46 DTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
D C+ + + N +SA+A L++KM + + YN ++N ++ G++ Q+
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 361
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
E+ K + SP+ VTYN + D E A + ++ + + ++Y TL + K
Sbjct: 362 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 421
Query: 163 E-----------------------------------LPEKAATTLKEMEKRTCRKNRVAY 187
E + ++A + M K + + Y
Sbjct: 422 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 481
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
SSL++ + +G I +M +N Y+ +I + + G +A +Y
Sbjct: 482 SSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNC 541
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D N+L+++ +L AE F + G+ P T++ + GY G
Sbjct: 542 NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLN 601
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSL 366
F I + P + L + G++ A+ L L G V + +YN+L
Sbjct: 602 AFSFFDDMIKCGQH--PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTL 659
Query: 367 LRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
L K+G + + + ++M ++NV D+ T L
Sbjct: 660 LAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 694
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 146/367 (39%), Gaps = 38/367 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T LL+ +++K A+ L+E+M + + Y +++ NG LD+ Q++ +
Sbjct: 410 TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 469
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT--------- 156
K +PDV+TY+ + + ++A++ + ++ + + I YSTL
Sbjct: 470 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 529
Query: 157 ----SLYIKMELPEKAA---------------TTLKEMEKRTCRKNRVA-------YSSL 190
+Y M A L E EK C +R+ Y +
Sbjct: 530 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 589
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ Y ++G + M+ + Y ++ L K G +A+ + I G
Sbjct: 590 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 649
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D + N LLA L A + ++++V + P T+ L G +KG+ +
Sbjct: 650 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 709
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRT 369
F A+G P+H + T + L + G A + + G T +N+++ +
Sbjct: 710 LFGTAMGR-GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 768
Query: 370 YAKAGKM 376
++ G+M
Sbjct: 769 CSRRGQM 775
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/205 (15%), Positives = 84/205 (40%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+KK T PD V +N + +C+ + A F ++ + P+ +Y+ L + K +
Sbjct: 751 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 810
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ + M + +++ + SL+ + G D +++ KM+ + + +
Sbjct: 811 LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNIL 870
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ + G+ KA ++ + ++ D N + ++ + + ++ G+
Sbjct: 871 INKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGV 930
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
P + + L G + G ++ +
Sbjct: 931 IPKHAQYITLINGMCRVGDIQGAFK 955
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H + ++ K AEA L M CG + YN ++ +NG ++ +E+
Sbjct: 1006 TFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM 1065
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+ ++ P++ TY + + A ++ N+ EK +L++
Sbjct: 1066 RHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1102
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 172/405 (42%), Gaps = 67/405 (16%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
S LLH Y + + + E+MS G + Y +++ +G++ K +++ + +
Sbjct: 168 SCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTE 227
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT----KIDPDWISYSTL-TSLYIKM 162
+ P+VVTYN+ + + KE + + L+L+K + PD ++Y+TL T L +
Sbjct: 228 RGLEPNVVTYNVLINSMC----KEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVL 283
Query: 163 ELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+ E A + M+ T R + + ++S++ +G+ + L++ M + N
Sbjct: 284 EMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVA 343
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I L+++ + +KA + DE S D +IL+ + Q+E AES+ + +
Sbjct: 344 FNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMR 403
Query: 282 TKGIKP------------C----------------------YTTWELLTWGYLKKGQMEK 307
+G++P C + + G K G+ +
Sbjct: 404 HQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKI 463
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSL 366
E K I +PD + N + GD+ AE +L + +G V +++SL
Sbjct: 464 AEEFLKDMID--EGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSL 521
Query: 367 LRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPVSEVS 411
++ Y G +T+K+L++T EM +V+
Sbjct: 522 IQGYGAKG-------------------DTEKILELTREMTAKDVA 547
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 99/264 (37%), Gaps = 36/264 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ + ++++A+A L+ M +CG
Sbjct: 98 TTLMRALCADRRAAQAVGLLRSMQDCG--------------------------------- 124
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
PDVVTY + D +TA + E+ ++ I+P+ + YS L Y K E
Sbjct: 125 -VRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESV 183
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+EM R + V Y++L+ G + R+ M + N Y +I+S
Sbjct: 184 GKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINS 243
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT--KGIK 286
+ K G +A ++ D N L+ + +++ A + ++ ++
Sbjct: 244 MCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVR 303
Query: 287 PCYTTWELLTWGYLKKGQMEKVLE 310
P T+ + G K G M + L+
Sbjct: 304 PDLMTFNSVIHGLCKIGWMRQALQ 327
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 17/261 (6%)
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAE---KAFLELKKT 143
LN ++ L + P +L L + D V+YN LAA Q + A + +
Sbjct: 31 LNRHLRLLPLPESPALLSALP--SVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRL 88
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
P+ ISY+TL +A L+ M+ R + V Y +L+ + D
Sbjct: 89 ASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTA 148
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--NIL 260
+ + +M + N Y+C++ K G +E +++E +SG G +P V L
Sbjct: 149 VELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEE---MSGRGIEPDVVMYTAL 205
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ + +++ A + + +G++P T+ +L K+G + + L+ K S +
Sbjct: 206 IDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNM--SEK 263
Query: 321 KWVPD----HRLITAAYNKLE 337
PD + LIT + LE
Sbjct: 264 GVQPDVVTYNTLITGLSSVLE 284
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L++ + + ++ AE+ + +M G P+ Y +L G + + +
Sbjct: 374 PDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDL 433
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
E+ +N D Y+ + +K+ AE+ ++ + PD ++YS +++ K
Sbjct: 434 FNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKS 493
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
A LK+M + + SL+ Y G +++L + ++M + ++
Sbjct: 494 GDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKII 553
Query: 223 TCVISSL 229
+ +++SL
Sbjct: 554 STIVTSL 560
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 8/224 (3%)
Query: 182 KNRVAYSSLLSLYTNMGYKDE---VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
++ V+Y+++L+ G D +LR+ L ++ N YT ++ +L +A
Sbjct: 54 RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ + D L+ + ++ A N + GI+P + L G
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-H 357
Y K G+ E V + F++ G R PD + TA + L G + A ++ + G
Sbjct: 174 YCKTGRWESVGKVFEEMSG--RGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231
Query: 358 VSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ YN L+ + K G + L + + M + VQ D T L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 14/359 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD CS ++ + A L+E+M GF + ++ + G LD
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
L+ + P+VVTY +AA A E A K E+++ P+ ++Y+ L K+
Sbjct: 170 LRSM--GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ A +K+M + N + ++SL+ + G D+ ++ M++ + N Y
Sbjct: 228 SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY 287
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ +I L K +F +A+ + +E ++ T D + L+ +++E AE R+
Sbjct: 288 SALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW--VPDHRLITAAYNKLEEQG 340
G P + + + K G K+LE +K + +RK PD + L + G
Sbjct: 348 SGCTPDVVVYSSIIHAFCKSG---KLLEA-QKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 403
Query: 341 DIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
I A+ +L ++ +G V ++ Y++++ K+ + +++RM K D T
Sbjct: 404 KIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 462
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 134/309 (43%), Gaps = 17/309 (5%)
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETA 133
GF +N +L + + + + + + EL + PDV +YN+ ++ + D A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
+ E+K PD +++ + + + A L+ M C N V Y++L++
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
+ +E +++ ++M N Y ++ +L KL A+++ + I G
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM--IEGGFA 246
Query: 254 PRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM---EKV 308
P V N L+ + R ++ A +V KG++P T+ L G K + ++V
Sbjct: 247 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
LE K R PD +A + L + I+ AE +L + +G +Y+S++
Sbjct: 307 LEEMK-----TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361
Query: 368 RTYAKAGKM 376
+ K+GK+
Sbjct: 362 HAFCKSGKL 370
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 41/242 (16%)
Query: 41 KMRG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
K RG PD T SAL+H + K EAE ++ +M+ G + Y+ +++ + +G+L
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370
Query: 97 DKVPQMLQELKK-------------------------------------NTSPDVVTYNL 119
+ + LQE++K + PDVVTY+
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ + A+K + K +PD ++Y+T+ K E+A L+ M++
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C N V Y++L+S DE R+ ++M + N Y +++ L G ++A+
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550
Query: 240 NI 241
+
Sbjct: 551 QL 552
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 6/215 (2%)
Query: 43 RGPD--TCSALLHSYVQNKKSAEAEALMEKMSECG-FLKCPLPYNHMLNLYISNGQLDKV 99
+ PD T + ++ + K AEA+ ++E+M E G L + Y+ ++N + L +
Sbjct: 385 KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 444
Query: 100 PQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
++L + K +PDVVTY + E AE +K+ P+ ++Y+TL S
Sbjct: 445 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 504
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM- 217
K ++A ++EM C N V Y+++++ G E ++ ++M A+
Sbjct: 505 LCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 564
Query: 218 -NDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+ A Y ++++L+ ++AE + ++ +S + +
Sbjct: 565 PDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSS 599
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 156/355 (43%), Gaps = 8/355 (2%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQML 103
P V+ +EA L++K+ G + N L+ +N + ++ ++
Sbjct: 190 PIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF 249
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E S + +YN+ + + + A + +++ PD +SYST+ Y +
Sbjct: 250 CEY--GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+KA + +M+ + + NR Y+S++ L +G E ++ ++MMS ++ YT
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I KLG A +DE S + D L+ + ++ ++ ++ ++++
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+KP T+ L Y K G+M + + P+ A + L + G++D
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQ--MGMTPNIVTYGALIDGLCKHGELD 485
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
A LL +R G ++ IYNS++ KAG + + +++ M+ + DA T
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 133/315 (42%), Gaps = 5/315 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+N F + + PD T + L+ Y + + A +L +M + G + Y +++
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+G+LD ++L E+ KK +V YN + + E A K E++ IDPD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I+Y+T+ Y ++ +KA L+EM R + V ++ L++ + +G ++ R+
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+ + Y ++ IY + D NIL+ +
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
L+ A Y ++ KG P T++ L + KK + + E F++ G V D +
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG--HGLVADGEI 715
Query: 329 ITAAYNKLEEQGDID 343
+ E+GD++
Sbjct: 716 YNFFVDMCYEEGDVE 730
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 130/322 (40%), Gaps = 16/322 (4%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYN 118
KS EAE ++ +M + + Y +++ + G + + E L K SPD +TY
Sbjct: 343 KSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYT 402
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + F E+ + PD ++Y+TL +Y K A + EM +
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
N V Y +L+ G D + +M ++N Y +++ + K G E+A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E E D ++ AY ++ A ++ +G++P T+ +L G
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582
Query: 299 YLKKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQ----GDIDGAEHLLVTL 352
+ G +E + +G + + VPD YN L +Q ++ + +
Sbjct: 583 FCMLGMLEDG----DRLLGWMLEKGIVPD----AITYNTLMKQHCIRNSMNTTTKIYKRM 634
Query: 353 RNAGHV-STEIYNSLLRTYAKA 373
RN G + YN L++ + KA
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKA 656
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + ++ +Y + +A L+++M + G + +N ++N + G L+ ++
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595
Query: 103 LQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L L+K PD +TYN + +N T K + ++ + PD +Y+ L + K
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A KEM ++ +Y++L+ + E ++++M +
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEI 715
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
Y + + G+ E N+ DE
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCDE 738
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 156/360 (43%), Gaps = 10/360 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV++A L R E + PD + T + L++ + K AEA L++KM E G
Sbjct: 173 RVSEALELVDRMVE--MGHKPDLI----TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ Y +LN+ +GQ ++L+++ ++N D V Y++ + + A F
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++ I + I+Y+ L + + A L++M KR N V +S L+ +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G E + K+M+ + YT +I K +KA + D S + R
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
NIL+ Y N+++ + ++ +G+ T+ L G+ + G++ E F++ +
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
RK P+ + L + G+ + A + + ++ + IYN ++ A K+
Sbjct: 467 --RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 129/301 (42%), Gaps = 5/301 (1%)
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M + +K P+ +T++ + + A + + + PD I+ +TL +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+A + +M + C+ N V Y +L++ G + + +KM K++ +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +I L K G + A N+++E E T + NIL+ + N + + ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ I P T+ +L ++K+G++ + E K+ I R PD T+ + ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH--RGIAPDTITYTSLIDGFCKENH 383
Query: 342 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKV 398
+D A ++ + + G + +N L+ Y KA ++ L + +M V D T
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 399 L 399
L
Sbjct: 444 L 444
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 36/256 (14%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ S+V+ K EAE L ++M G + Y +++ + LDK QM+ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P++ T+N+ + N + + F ++ + D ++Y+TL + ++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------------- 210
A +EM R N V Y LL + G ++ L I++K+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 211 ---MSLFAKMNDA-----------------EYTCVISSLVKLGEFEKAENIYDEWESISG 250
M +K++DA Y +I L K G +AE ++ + E
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 251 TGDPRVPNILLAAYIN 266
D NIL+ A++
Sbjct: 575 APDGWTYNILIRAHLG 590
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++++ + + +EA + + F+ + YN +++ Y+ G +D + +E+
Sbjct: 538 TFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREM 597
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ SP+V+TY + N + A K ++K+ ++ D Y+TL + + KM+
Sbjct: 598 CRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDM 657
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A ++ + N + Y+ ++S Y N+ + L + K+M++ + YT +
Sbjct: 658 ENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSL 717
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L+K G+ A ++Y E D + N+L+ N QLE A + I
Sbjct: 718 IDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNI 777
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
P + L G+ K+G +++ + + + VPD
Sbjct: 778 TPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLD--KGLVPD 815
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 146/355 (41%), Gaps = 41/355 (11%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYN 118
K EA L +KM G + YNHM+ + G +D +++ ++ P+ +TY
Sbjct: 446 KVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYT 505
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDP-DW---------------------------- 149
+ + + D E A F ++ I P D+
Sbjct: 506 ILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ 565
Query: 150 ------ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
++Y+ + Y+K + A + +EM + N + Y+SL++ + D
Sbjct: 566 SFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLA 625
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
L++ M +++ Y +I+ K+ + E A + + + T + V NI+++A
Sbjct: 626 LKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISA 685
Query: 264 YINRNQLEMAESFYNRLVTKGIKPC-YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
Y N N +E A + + ++ I PC + L G LK+G++ L+ + + + R
Sbjct: 686 YRNLNNMEAALNLHKEMINNKI-PCDLKIYTSLIDGLLKEGKLSFALDLYSEML--CRGI 742
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
VPD + N L G ++ A +L + T +YN+L+ + K G +
Sbjct: 743 VPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNL 797
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 122/273 (44%), Gaps = 1/273 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+ + A + ++M G + +N ++N G++ + L
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K++ P +TYN + + ++AE + E+ +++I P+ I+Y++L + + K
Sbjct: 563 IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKM 622
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A +M+++ + Y++L++ + M + + + K++ + N Y +
Sbjct: 623 DLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIM 682
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ L E A N++ E + D ++ L+ + +L A Y+ ++ +GI
Sbjct: 683 ISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGI 742
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
P + +L G GQ+E + K+ G+
Sbjct: 743 VPDIFMYNVLINGLCNHGQLENAGKILKEMDGN 775
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 135/338 (39%), Gaps = 20/338 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSEC----GF-LKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
LL+ YV + A+ L+E + EC GF L +N++L Y+ ++ + + +
Sbjct: 118 LLNKYVFGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRA 177
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ P V N+ L A +N E A + F E+ + +I D + L +K
Sbjct: 178 MLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGK 237
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A + R + + +YS ++ D ++ + L ++ Y
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVP-NI-----LLAAYINRNQLEMAESFYN 278
VI + V+LG F +A + DE D RVP N+ L+ Y R + A ++
Sbjct: 298 VIGACVRLGNFGEALRLKDEMV------DSRVPVNVAVATSLIKGYCVRGDVNSALRLFD 351
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+V G+ P + +L K G +EK E + + P ++ +
Sbjct: 352 EVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRM--KCMGLQPTVFILNFLLKGFRK 409
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
Q ++ A LL G S YN +L + GK+
Sbjct: 410 QNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKV 447
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 130/328 (39%), Gaps = 5/328 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
LL SYV+ K EA M E G + N +L I ++ ++ E+ ++
Sbjct: 158 LLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERR 217
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
D T + + AC AE+ F + + D SYS + + + A+
Sbjct: 218 IYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLAS 277
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
++ E+ + Y++++ +G E LR+ +M+ +N A T +I
Sbjct: 278 KLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGY 337
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G+ A ++DE + T + + ++L+ +E A Y R+ G++P
Sbjct: 338 CVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTV 397
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
L G+ K+ +E A+ + V + ++ L E G ++ A +L
Sbjct: 398 FILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLW---LCELGKVNEACNLW 454
Query: 350 VTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ G + + YN ++ + K G M
Sbjct: 455 DKMIGKGITPSLVSYNHMILGHCKKGCM 482
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 19/322 (5%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLA 122
A L+E E G++ Y ++ + G + ++ E+ + P +V +
Sbjct: 276 ASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIK 335
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ D +A + F E+ + + P+ +S L K+ EKA M+ +
Sbjct: 336 GYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQP 395
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND----AEYTCVISSLVKLGEFEKA 238
+ LL G++ + L ++ A N Y V+ L +LG+ +A
Sbjct: 396 TVFILNFLLK-----GFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEA 450
Query: 239 ENIYDEWESISGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
N+ W+ + G G P + N ++ + + ++ A N ++ G+KP T+ +L
Sbjct: 451 CNL---WDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTIL 507
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
G KKG E F + + + VP + N L + G + A L T
Sbjct: 508 MEGSFKKGDCEHAFNMFDQMVAA--GIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ 565
Query: 356 GHVSTEI-YNSLLRTYAKAGKM 376
+ T + YN ++ Y K G +
Sbjct: 566 SFIPTSMTYNCIIDGYVKEGAI 587
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 143/348 (41%), Gaps = 20/348 (5%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PDK T S ++ + + +A AL+ +M G + +N +L + G +
Sbjct: 311 VPDKF----TYSTVVSALADAGRVDDAVALVHEMVVDGVVAAEA-FNPVLGAMLRTGDVT 365
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
++ ++ K +P TYN+ L + A +++ ++ P ++Y +
Sbjct: 366 GAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVV 425
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
++ E A ++EM + N +S +++ + +G D R+W M++ K
Sbjct: 426 DGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIK 485
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE-- 274
N Y+ +I L + G+ +AE ++ E VPNI+ + + R ++ +
Sbjct: 486 PNVVLYSAMIDGLARCGKMTEAELLFREMIEAKC-----VPNIMTYSSMVRGYFQIGDSS 540
Query: 275 ---SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
SF+ ++ G P T+ +L G G+ + + +K +G R VPD T+
Sbjct: 541 QALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLG--RGCVPDTIAYTS 598
Query: 332 AYNKLEEQGDIDGAEHLLVTL--RNAGHVSTEIYNSLLRTYAKAGKMP 377
G +D L + R H YN LL +A +P
Sbjct: 599 MIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLP 646
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L++ +S +A + + M G + + Y M+ + +G +D ++ ++
Sbjct: 560 TYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDM 619
Query: 107 --KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ +T PDV+ YN+ L D A ++ DPD ++ +T ++E+
Sbjct: 620 LARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLR---EIEV 676
Query: 165 PEKAATTLKEMEKRTCRKNR 184
+K L+ + R C + R
Sbjct: 677 GQKGQEFLEGLVVRLCNRKR 696
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 156/374 (41%), Gaps = 13/374 (3%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
VA+ +LQ E F +++P+ RG LL + V +AE + KM E F
Sbjct: 219 VAKVHSLQKA--EIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTS 276
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
N +L LY + + +L ++N P TY+ + + D EK
Sbjct: 277 VFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVET 336
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K+ I+ D S L YI+ L E+A +KE+E + ++ SLL LY ++G
Sbjct: 337 IKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGD 396
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD--PRVP 257
D V R +S F N Y IS++ G+ ++ E +E + P +P
Sbjct: 397 SDNVRR-----LSRFVDQN-PRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMP 450
Query: 258 NI-LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
L+ Y L R+ GI +TW L Y+K G++ K +A
Sbjct: 451 YFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRAT 510
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
K P A + ++GD+ E + + ++ A + + + Y ++L Y A
Sbjct: 511 KD-NKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKT 569
Query: 376 MPLIIVERMQKDNV 389
++ERM+ DNV
Sbjct: 570 PAYGMIERMKADNV 583
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 160/362 (44%), Gaps = 9/362 (2%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
F E+ + C+ +L + K+ EA L+ KM G + YN+++ +
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 94 GQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
+D + L+K P+ TY++ + C +D++ A + + + I+ + + Y
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 153 STLTSLYIKMELPEKAATTLKEM--EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
T+ + K+ KA L M EKR C + ++Y+S++ + G D + +++M
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
N YT +++ L K ++A + DE ++ D L+ + R+ +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
E A + ++ L+ +G+ P + L G+ G M L+ +KK + + D T
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC--DLGTYT 728
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKMPLII--VERMQKD 387
+ L + G++ A L ++ G V E IY ++ +K G+ ++ E M+K+
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 388 NV 389
NV
Sbjct: 789 NV 790
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 100/230 (43%), Gaps = 1/230 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +++ + G++D +E+ N SP+V+TY + N + A + E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K + D +Y L + K E A+ E+ + ++ Y+SL+S + N+G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
L ++KKM+ + + YT +I L+K G A +Y E +++ D + +
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
++ + Q + + + P + + G+ ++G +++
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 128/275 (46%), Gaps = 5/275 (1%)
Query: 28 TRARENFFENLPDKMRGPDTC---SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
++ARE N+ ++ R +C ++++ + + + A A E+M G + Y
Sbjct: 565 SKARE-LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 85 HMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++N N ++D+ +M E+K K D+ Y + +++ E+A F EL +
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
++P Y++L S + + A K+M K R + Y++L+ G
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
++ +M ++ ++ YT +++ L K G+F K +++E + + T + + N ++A
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ L+ A ++ ++ KGI P T+++L G
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 142/332 (42%), Gaps = 8/332 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY-NHMLNLYISNGQLDKVPQMLQELKK- 108
LL++Y +++++ A ++ +M E + PY N L+ + L + ++ +
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPF-FPYVNRTLSALVQRNSLTEAKELYSRMVAI 227
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
D VT L + A + A + + +PD + YS K A
Sbjct: 228 GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMA 287
Query: 169 ATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ L+EM EK+ C ++ Y+S++ G D+ +R+ +M+S MN T +I+
Sbjct: 288 NSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLIT 347
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K + A ++D+ E + + ++L+ + ++E A FY ++ G+ P
Sbjct: 348 GHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ G+LK + E+ L+ F + S + + + + L +QG D A
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDE---SFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPL 378
LL + + G + YN+++ + + M L
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 14/373 (3%)
Query: 38 LPDKMR--GPD----TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
L DKM GP T S L+ + +N + +A +KM G + ++ ++
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ ++ ++ E + +V N L+ Q + A + +++ I P+ +S
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ + + + + + A + ++ + N YS L+ + L + M
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKA-ENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S ++N Y +I+ L K+G+ KA E + + E N ++ + ++
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEM 600
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLI 329
+ A + Y + GI P T+ L G K +M++ LE + V+ +P + +
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQK 386
+ K + +++ A L L G + S IYNSL+ + G M L + ++M K
Sbjct: 661 IDGFCK---RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 387 DNVQMDAETQKVL 399
D ++ D T L
Sbjct: 718 DGLRCDLGTYTTL 730
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ +++ A L +M G + + Y ++N GQ KV +M +E+
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KKN +P+V+ YN +A + + + A + E+ I PD ++ L S + P
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQP 845
Query: 166 EKAAT 170
+AA+
Sbjct: 846 VRAAS 850
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
AL+ + + A AL ++ E G YN +++ + + G + + ++ LK
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
D+ TY + + A + + E++ + PD I Y+ + + K K
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+EM+K N + Y+++++ + G DE R+ +M+ + A + ++S
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Query: 228 SLV 230
V
Sbjct: 838 GQV 840
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 143/325 (44%), Gaps = 4/325 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
L+ Y + A L+++M + + + Y M+N L ++L+++
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+VV Y+ + AS+ E A + + + + PD Y+ + S K E+A+
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T L E++ R + + V + + + Y+ G E + + +M+ N+ YT +I+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G +A +I+ ++ D + + + + +++ A ++ L KG+ P
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ L G+ K+G++EK E + ++ P+ + A + L + GDI A L
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEM--CLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 418
Query: 350 VTLRNAGHVSTEI-YNSLLRTYAKA 373
+ G + Y++++ Y K+
Sbjct: 419 DGMPEKGLEPDSVTYSTMIDGYCKS 443
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 161/394 (40%), Gaps = 26/394 (6%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + PD CSAL+ +++ E + + M CG + YN +++
Sbjct: 33 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 92
Query: 93 NGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G+++K ++L+ + P+ T+ L + +++ A + E++K + P +S
Sbjct: 93 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 152
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y + + + A L++M + N V YS+L+ Y + G +E R+ M
Sbjct: 153 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 212
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ Y +IS L K G+ E+A E + D + Y ++
Sbjct: 213 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 272
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLI 329
A +++ ++ G+ P + +L G+ K G + + L F+ A+G +PD +
Sbjct: 273 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG----VLPDVQTC 328
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM------------ 376
+A + L + G + A + L+ G V Y+SL+ + K G++
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388
Query: 377 ----PLIIVERMQKDNVQMDAETQKVLKITSEMP 406
P I + D + + Q+ K+ MP
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 130/301 (43%), Gaps = 27/301 (8%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
RAR+ F+ +P+K PD T S ++ Y +++ AEA +L +M G YN +
Sbjct: 413 RARK-LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
++ G ++K + +E+ + +++N + + A + F E+ +I
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 531
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD ++Y+T+ + K E+A KEM++R N + D V +
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQER----NLIV--------------DTVFAL 573
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++KM++ K ++ Y VI + K +A + DE + ++L+ A
Sbjct: 574 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 633
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVP 324
R L A + + G+KP L + + G+M++ F+ K++G VP
Sbjct: 634 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG----LVP 689
Query: 325 D 325
D
Sbjct: 690 D 690
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/420 (19%), Positives = 165/420 (39%), Gaps = 81/420 (19%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
A+++ K + A L+EKM+ G + Y+ ++ Y S G++++ ++L +
Sbjct: 154 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 213
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+PD+ YN ++ + E A LE++ + PD +++ Y K +
Sbjct: 214 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----------------- 210
AA EM N Y+ L++ + G E L I++ +
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 333
Query: 211 -----------MSLFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEW------- 245
+ +F+++ + Y+ +IS K GE EKA ++DE
Sbjct: 334 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 393
Query: 246 ---------ESISGTGDPR--------VP-----------NILLAAYINRNQLEMAESFY 277
+ + +GD + +P + ++ Y + A S +
Sbjct: 394 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 453
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY---N 334
+ + +KG++P + L G K+G MEK + F++ + + Y
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 513
Query: 335 KLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
K++E + + ++ HV+ Y +++ + KAGKM ++ + MQ+ N+ +D
Sbjct: 514 KIQEASQL--FQEMIAKQIMPDHVT---YTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 568
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ +Y+ +T+ + + +A T +EM+K + + A S+L+ + G DEVLRI
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
M+S +N Y +I L K G+ EKA I ++ + R +L+ Y
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLECFKKAIGSVRKWV 323
+ + A + + + + P ++ + G + K+LE K ++ V
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE--KMTFSGLKPNV 185
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ + Y +G I+ A LL + +G V+ +I YN+++ +KAGKM
Sbjct: 186 VVYSTLIMGY---ASEGRIEEARRLLDGMSCSG-VAPDIFCYNAIISCLSKAGKM 236
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 3/271 (1%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+K P+ TY + A A+ F E++KT + PD+ + S L +++ +
Sbjct: 3 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+ M N + Y+ L+ G ++ I K M++L K N + +I
Sbjct: 63 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ +A + DE E + ++ + L +A ++ G+K
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + L GY +G++E+ S PD A + L + G ++ A
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGM--SCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L+ ++ G + + + + Y+K GKM
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 154/341 (45%), Gaps = 16/341 (4%)
Query: 43 RG-PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQL 96
RG PD S LL+ +S EA L+ M++ G CP + Y+ ++N + G L
Sbjct: 46 RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGG-DCPPDVVSYSTVINGFFKEGDL 104
Query: 97 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
DK+ L + SP+VVTYN +AA + A + + K+ + PD ++Y+++
Sbjct: 105 DKM------LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ P++A LK+M + V Y+SL+ G E +I+ M K
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ Y ++ G + + D + V +IL+ AY + ++E A
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
++++ +G+ P T+ + K G++E + F++ I + PD + + + L
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR--PDSIVYNSLIHSL 336
Query: 337 EEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ AE L + + + G +ST +NS++ ++ K G++
Sbjct: 337 CIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD M T ++++H + + + EA ++KM G + YN +++ NG+
Sbjct: 148 MPDCM----TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ ++ + K+ PD+ TY L A++ + + I P+ +S L
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
Y K E E+A +M ++ N V Y +++ + G ++ + +++M+ +
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR 323
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ Y +I SL ++EKAE ++ E N ++ ++ ++ +
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383
Query: 277 YNRLVTKGIKPCYTTWELLTWG 298
++ +V G+KP +++T G
Sbjct: 384 FDLMVRIGVKP-----DIITLG 400
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 30/244 (12%)
Query: 101 QMLQELKKNTSPDVVTYNLWLAACASQNDKETA--------------------------- 133
+ EL + PDV +YN+ L +N + A
Sbjct: 38 HVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 134 ---EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E ++ +I P+ ++Y+++ + K + +KA L M K + + Y+S+
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + + G E + KKM S + + Y ++ L K G +A I+D
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D LL Y + L + +V GI P + + +L Y K+ ++E+ +
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 311 CFKK 314
F K
Sbjct: 278 VFSK 281
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 6/272 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L++ +Q+KK +A AL+ KM E G + Y ++ + D ++ + +
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMM 554
Query: 107 KKNT-SPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KN +PD YN+ A C S AE+A+ L + + ++Y++L + K
Sbjct: 555 EKNGLTPDEQAYNVLTDALCKSGR----AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 610
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ AA +++M C+ + YS LL +E L I +M K N YT
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+IS ++K G+ + A+++++E S + +++Y Q+E AE + G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 730
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ P T+ + G G M++ K+ +
Sbjct: 731 VTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV 762
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 162/406 (39%), Gaps = 67/406 (16%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L++ K EAE L+ GF + + +++N Y ++D ++
Sbjct: 352 PDDWTYNSLIYGLCGGKLD-EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410
Query: 103 LQEL-KKNTSPDVVTY----NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ N D+ Y N+ + C + KET + F + P+ + Y+++
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF----ANGLAPNVVIYTSIID 466
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
Y K+ + A K ME C N Y SL+ +D+ L K M+L KM
Sbjct: 467 GYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI----QDKKLH---KAMALITKM 519
Query: 218 ND-------AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ YT +I K EF+ A +++ E T D + N+L A +
Sbjct: 520 QEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRA 579
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ-------MEKVLE------------- 310
E A SF LV KG+ T+ L G+ K G +EK++
Sbjct: 580 EEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVL 636
Query: 311 ----CFKKAIGSVRKWVPDHRLITA------AY----NKLEEQGDIDGAEHLLVTLRNAG 356
C +K + + D ++ AY +++ ++G D A+ L + ++G
Sbjct: 637 LQALCKQKKLNEALS-ILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSG 695
Query: 357 H-VSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
H S Y + +Y K G++ ++ M++D V D T +
Sbjct: 696 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIF 741
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 112/295 (37%), Gaps = 49/295 (16%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD VTYN + A + A + F L+++ + D + + L Y + KA
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236
Query: 172 LKEMEKRTCRKNRVAYSSLL-SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
L M CR+N +Y+ L+ LY ++ ++ ++ M+ +N YT +I L
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVF-MMVQDGCSLNLHMYTLLIKGLC 295
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G A + DE + +G+ P
Sbjct: 296 KEGRIHDARGLLDE-----------------------------------MPLRGVVPSVW 320
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE---QGDIDGAEH 347
T+ + GY K G+M+ L KA+ PD YN L G +D AE
Sbjct: 321 TYNAMIDGYCKSGRMKDALGI--KALMEQNGCNPDDW----TYNSLIYGLCGGKLDEAEE 374
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
LL G T I + +L+ Y KA ++ L + M N ++D + VL
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/275 (17%), Positives = 104/275 (37%), Gaps = 17/275 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ ++ K A++L +M G Y ++ Y GQ+++ ++ E+++
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 728
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PDVVTY++++ C + A + +P+ +Y L ++KM L
Sbjct: 729 DGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788
Query: 168 AATT----------------LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
L+ M K V YSS+++ + +E + M+
Sbjct: 789 HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
N+ YT +I + F K + + + L+ + +
Sbjct: 849 GKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
A+S + L+ W++L G LK G ++
Sbjct: 909 RAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 104/272 (38%), Gaps = 20/272 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ + + + A L+EKM G Y+ +L +L++ +L ++
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++V Y + ++ + + A+ F E+ + P +Y+ S Y K+
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQI 716
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A + EME+ + V Y ++ +MGY D K+M+ + N Y
Sbjct: 717 EEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTY--- 773
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L F K I + SG N +L R++ G+
Sbjct: 774 ---WLLLKHFLKMSLINAHYIDTSGM-------------WNWIELNTVWQLLERMMKHGL 817
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
P T+ + G+ K ++E+ +G
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLG 849
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 142/327 (43%), Gaps = 9/327 (2%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS 111
L+ ++ K E+ ++ M G+ + ++ + + +++K Q+++ L+K+
Sbjct: 84 LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK 143
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PDV YN ++ + + A K +KK +PD ++Y+ L + + A
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ ++ K C+ + Y+ L+ G DE +++ +M+S + + Y V++ + K
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G ++A NILL +N + E E + ++ KG +P T
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323
Query: 292 WELLTWGYLKKGQMEK---VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
+ L + G++++ VL+ K+ + PD + L +G +D A
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKE-----KALAPDGYSYDPLISALCREGKVDLAIEF 378
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAG 374
L + + GH+ + YNS+L + K G
Sbjct: 379 LDDMISGGHLPDILSYNSILASLCKNG 405
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 150/328 (45%), Gaps = 4/328 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELK 107
+A++ + + + A ++++M + GF + YN ++ + G+LD +++ Q LK
Sbjct: 150 NAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLK 209
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P V+TY + + A +Q + A K E+ + PD +Y+ + + K + ++
Sbjct: 210 DNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDR 269
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L + K C Y+ LL N G + ++ M+ + N Y+ +I+
Sbjct: 270 AFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLIT 329
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L + G+ ++A+N+ + + D + L++A ++++A F + +++ G P
Sbjct: 330 ALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP 389
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ + K G ++ L F+K +G V P+ + L GD A
Sbjct: 390 DILSYNSILASLCKNGNADEALNIFEK-LGEV-GCPPNAGSYNTLFGALWSSGDKIRALG 447
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+++ + + G EI YNSL+ + G
Sbjct: 448 MILEMLSNGIDPDEITYNSLISCLCRDG 475
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + EA L+++M G YN ++N G LD+ + L +
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KN V TYN+ L ++ E EK ++ +P+ I+YSTL + +
Sbjct: 278 SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKI 337
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A LK M+++ + +Y L+S G D + M+S + Y +
Sbjct: 338 DEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSI 397
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++SL K G ++A NI+++ + + N L A + A +++ GI
Sbjct: 398 LASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGI 457
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
P T+ L + G +++ +E
Sbjct: 458 DPDEITYNSLISCLCRDGLVDQAIE 482
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 18/345 (5%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPD + T + L + + + S++A L+E+M E G + +N ++ +G+L+
Sbjct: 342 LPDVV----TYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE 397
Query: 98 KVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
L ++ + +PDV+TYN + A + A E+ + + D + +T+
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL 457
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
K + E+A L+ +R + V+Y ++++ Y + LR+W +M+
Sbjct: 458 YNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLT 517
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ + Y +I L ++G ++A + +E D NI++ AY LE A F
Sbjct: 518 PSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQF 577
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA-AYNK 335
+N++V KP T L G G+++K L+ F+ WV + + YN
Sbjct: 578 HNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFE-------SWVEKGKKVDVITYNT 630
Query: 336 LEE----QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
L + GD+D A H + G YN +L ++AG+
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 675
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 141/355 (39%), Gaps = 25/355 (7%)
Query: 4 RRPHGAQVRAQSYRQRVAQAQALQT----------------RARENFFENLPDKMRGPD- 46
R PH A S R+RV +LQ +A + F ++ P+
Sbjct: 145 RLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNH 204
Query: 47 -TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + L+H++ A+A + + M G + YN +LN + G L + +L
Sbjct: 205 YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLAR 264
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KK+ +P TYN ++A A + A K + +PD +Y+ L + +
Sbjct: 265 MKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGK 324
Query: 165 PEKAATTLKEMEK-RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++A EME+ T + V Y++L + LR+ ++M K +
Sbjct: 325 VDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHN 384
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
VI L K GE E A ++ D N L+ A+ + A + + +V +
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNK 335
G+K T + + K+ + E+ + R ++PD + + AAY K
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSP--PQRGFMPDEVSYGTVMAAYFK 497
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 153/365 (41%), Gaps = 10/365 (2%)
Query: 38 LPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
+ D PD T + L+H++ + A+A LM++M G N +L +
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKR 465
Query: 96 LDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
++ +LQ ++ PD V+Y +AA + + E A + + E+ + K+ P +Y+T
Sbjct: 466 YEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNT 525
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L +M ++A L E+ ++ + Y+ ++ Y G + + KM+
Sbjct: 526 LIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS 585
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
K + +++ L G+ +KA +++ W D N L+ ++ A
Sbjct: 586 FKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTAL 645
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAA 332
F+ + +G++P T+ ++ + G+ E+ K G++ + L ++
Sbjct: 646 HFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSS 705
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQ 390
++ E D E T+ N ++E Y L+ +G K I++ M + +
Sbjct: 706 VDEAESGKDAKTEEE---TVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMS 762
Query: 391 MDAET 395
+D+ T
Sbjct: 763 VDSST 767
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 5/293 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N +++ + S G L L ++ SPD VTYN L A + A +K
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K + P +Y+TL S Y ++ ++A ++ M + Y+ L + G D
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326
Query: 202 EVLRIWKKMMSLFAKMND-AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
E R+ +M L + D Y + + K A + +E NI+
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ +LE A N++ G+ P T+ L + K G + K + +
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
K + L T YN +E+ + A+ LL + G + E+ Y +++ Y K
Sbjct: 447 K-LDTFTLNTVLYNLCKEK-RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFK 497
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 38/225 (16%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + ++H+Y + A KM E F + N ++N NG+LDK ++
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ ++K DV+TYN + D +TA F +++ + PD +Y+ + S +
Sbjct: 613 FESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 672
Query: 162 MELPEKAATTLKEM---------------------EKRTCRKNRV--------------A 186
E+A L ++ E + + + A
Sbjct: 673 AGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEA 732
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
Y+ L++ G E I +MM ++ + Y ++ LVK
Sbjct: 733 YTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 123/306 (40%), Gaps = 16/306 (5%)
Query: 101 QMLQELKKNTS--PDVVTYNLWLAACA--SQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
Q+L L++ P + N L+A A + + AF + ++ P+ +++ L
Sbjct: 152 QLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLV 211
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ A +TL M+ + V Y++LL+ + G E + +M
Sbjct: 212 HTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVA 271
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
Y ++S+ +LG ++A + + + D N+L A +++ A
Sbjct: 272 PTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRL 331
Query: 277 YNRLVTKG-IKPCYTTWELLTWGYLK---KGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
+ + G + P T+ L K ++LE ++ V+ + H ++
Sbjct: 332 KDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK--GVKATLVTHNIVIKG 389
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNV 389
K G+++GA L + + G I YN+L+ + KAG + +++ M + +
Sbjct: 390 LCK---DGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446
Query: 390 QMDAET 395
++D T
Sbjct: 447 KLDTFT 452
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQML 103
T + ++H V+ + EA L M E KCP + Y +++ Y GQ++ +
Sbjct: 153 TLNIIIHCLVKIGQCGEAIELFNSMRE-RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIF 211
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ + P++V YN L A AS+ A F +KK + PD +SY++L + Y +
Sbjct: 212 DLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRS 271
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
PEKA +M+K +C+ N+V+Y++L+ Y + G E + + +M + +
Sbjct: 272 AQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSI 331
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ ++++ + + + E I + S + N + +Y++ E A Y +
Sbjct: 332 STLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRE 391
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+KP T+ +L G K G+ + L F+ + S
Sbjct: 392 SNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDS 427
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 139/359 (38%), Gaps = 41/359 (11%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
D ++ Y ++ + +A L +M E YN +++ + GQ ++++
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMED 71
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L+ P TYN + AC + + + A + ++ + + PD ++++ + S
Sbjct: 72 MLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQ 131
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM--NDAEY 222
KA + + M+ + + ++ +G E + ++ M K + Y
Sbjct: 132 YSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY 191
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T ++ S G+ E + I+D + + N LL AY +R A + +N +
Sbjct: 192 TSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK 251
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G++P ++ L Y + Q EK E F NK++
Sbjct: 252 NGLRPDIVSYTSLLNAYGRSAQPEKAREVF---------------------NKMK----- 285
Query: 343 DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+N+ + YN+L+ Y AG K + ++ M+KD +Q D + L
Sbjct: 286 ----------KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTL 334
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L++ N K EA AL ++M + +N +LN + N + + ++ ++
Sbjct: 273 TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ +P+V TYN+ + A + E A + + + PD +Y+ L + +
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + EM+ + + + + Y+ L+ N G + LR+ +M K + Y +
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G A N+ + E + + N+L+ + +++LE A N ++ KG+
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512
Query: 286 KPCYTTWELLTWGYLKKG 303
P T+E++T ++KG
Sbjct: 513 IPNRMTYEIVTEEMMEKG 530
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 129/277 (46%), Gaps = 8/277 (2%)
Query: 41 KMRGPD----TCSALLHSYVQNKKSAE---AEALMEKMSECGFLKCPLPYNHMLNLYISN 93
K+RG T + L+ Y + K + A+A++++M G + +N +++ + +
Sbjct: 190 KVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKD 249
Query: 94 GQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
+ ++ E+ ++ P+VVTYN + + A ++ + + P+ I++
Sbjct: 250 KNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L + + K ++ ++A +M K+ N Y+ L+ Y ++ +++ M+
Sbjct: 310 NALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLG 369
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ + Y C+I+ L + G+ E A N+ E ++ D NIL+ + N+ +++
Sbjct: 370 KGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKK 429
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
A + + KG+KP T+ + GY K+G + L
Sbjct: 430 ALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAAL 466
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 140/332 (42%), Gaps = 9/332 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKN 109
L+ +Y +N ++ ++ S+ G N +++ + G++ + + +E+ ++
Sbjct: 99 LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR 158
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE--- 166
P ++++N+ + A ++K + + I+Y+TL Y KM
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA LKEM N V ++ L+ + ++++ +M K N Y +I
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ L G+ +A + D+ + + N LL + ++ A ++ + +GI
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P TT+ +L Y K ME ++ +G + PD L +GD++ A
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLG--KGVCPDVSTYNCLIAGLCRKGDLEAAR 396
Query: 347 HLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ LV+ + H+ ++ YN L+ + G+M
Sbjct: 397 N-LVSEMDTKHLKADLITYNILIDSLCNKGEM 427
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 157/353 (44%), Gaps = 16/353 (4%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F + DK P+ T + L++ +A L+++M E GF+ + YN +LN Y
Sbjct: 970 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 1029
Query: 91 ISNGQLDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK---ID 146
G+ +++ + K DV TYN+++ + + + KA+L LKK + I
Sbjct: 1030 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNH---RSAKAYLLLKKMRKEMIS 1086
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ ++Y+TL + ++K AA EM K N V Y++L+ + ++G +E LR+
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 1146
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
M + ++N+ Y +++ L K +FE A+ + + +L+
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 1206
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
L+ A + G+ P T+ L G+ + G ++ E + R + +
Sbjct: 1207 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM---YRSGLVLN 1263
Query: 327 RLI--TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++I T YN + G++ A + + GH + N L+ + + GK+
Sbjct: 1264 KIIYSTLIYN-FCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 1315
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 155/395 (39%), Gaps = 43/395 (10%)
Query: 46 DTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
D C+ + + N +SA+A L++KM + + YN ++N ++ G++ Q+
Sbjct: 1053 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 1112
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
E+ K + SP+ VTYN + D E A + ++ + + ++Y TL + K
Sbjct: 1113 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 1172
Query: 163 E-----------------------------------LPEKAATTLKEMEKRTCRKNRVAY 187
E + ++A + M K + + Y
Sbjct: 1173 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 1232
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
SSL++ + +G I +M +N Y+ +I + + G +A +Y
Sbjct: 1233 SSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNC 1292
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D N+L+++ +L AE F + G+ P T++ + GY G
Sbjct: 1293 NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLN 1352
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSL 366
F I + P + L + G++ A+ L L G V + +YN+L
Sbjct: 1353 AFSFFDDMIKCGQH--PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTL 1410
Query: 367 LRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
L K+G + + + ++M ++NV D+ T L
Sbjct: 1411 LAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 1445
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 146/367 (39%), Gaps = 38/367 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T LL+ +++K A+ L+E+M + + Y +++ NG LD+ Q++ +
Sbjct: 1161 TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 1220
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT--------- 156
K +PDV+TY+ + + ++A++ + ++ + + I YSTL
Sbjct: 1221 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 1280
Query: 157 ----SLYIKMELPEKAA---------------TTLKEMEKRTCRKNRVA-------YSSL 190
+Y M A L E EK C +R+ Y +
Sbjct: 1281 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 1340
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ Y ++G + M+ + Y ++ L K G +A+ + I G
Sbjct: 1341 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 1400
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D + N LLA L A + ++++V + P T+ L G +KG+ +
Sbjct: 1401 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 1460
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRT 369
F A+G P+H + T + L + G A + + G T +N+++ +
Sbjct: 1461 LFGTAMGR-GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 1519
Query: 370 YAKAGKM 376
++ G+M
Sbjct: 1520 CSRRGQM 1526
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 105/285 (36%), Gaps = 42/285 (14%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+KK T PD V +N + +C+ + A F ++ + P+ +Y+ L + K +
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 1561
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ + M + +++ + SL+ + G D +++ KM+
Sbjct: 1562 LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMI-------------- 1607
Query: 226 ISSLVKLGEFEKAENIYDEWESISGT-GDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+ GT D NIL+ Y ++ A N + T G
Sbjct: 1608 ----------------------MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLG 1645
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P T+ + G KK + + + + +P H N + GDI G
Sbjct: 1646 VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN--GVIPKHAQYITLINGMCRVGDIQG 1703
Query: 345 AEHLLVTLRNAGHVSTEIYNS-LLRTYAKAGKM--PLIIVERMQK 386
A L + G S E+ S ++R GK +++++ M +
Sbjct: 1704 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR 1748
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H + ++ K AEA L M CG + YN ++ +NG ++ +E+
Sbjct: 1757 TFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM 1816
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+ ++ P++ TY + + A ++ N+ EK +L++
Sbjct: 1817 RHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1853
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 7/298 (2%)
Query: 24 QALQTRAR-ENFFENLPDKMRG---PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+ L R R +N L D +R PD T + LL + + +A L+++M + G
Sbjct: 160 RGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCA 219
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN ++N G++D + L+ L P+ V+YN+ L + E AEK
Sbjct: 220 PDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL 279
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E+ + P+ ++++ L S + L E A L ++ K C N ++Y+ +L +
Sbjct: 280 MAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCK 339
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
D + + M+S + Y ++++L + GE + A + + + T
Sbjct: 340 QKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 399
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N ++ + E A N +VTKG++P T+ ++ G ++G++E+ ++ F K
Sbjct: 400 YNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 137/335 (40%), Gaps = 16/335 (4%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQ 101
GP C+AL+ + ++AEA ++ P + YN M+ Y GQLD +
Sbjct: 91 GP--CAALIKKLCASGRTAEARRVLASCE-------PDVMSYNAMVAGYCVTGQLDNARR 141
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ + PD TYN + + + A ++ + PD ++Y+ L K
Sbjct: 142 LVAAMP--MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCK 199
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A L EM + C + V Y+ +++ G D+ + K + S + N
Sbjct: 200 RSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVS 259
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y V+ L +E AE + E + N+L++ R +E A +++
Sbjct: 260 YNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP 319
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G P ++ + + K+ +M++ + + + S PD L G+
Sbjct: 320 KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS--GCYPDIVSYNTLLTALCRGGE 377
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
+D A LL L++ G I YN+++ KAGK
Sbjct: 378 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 131/281 (46%), Gaps = 5/281 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F ++LP P+T S +L ++ +AE LM +MS G + +N +++
Sbjct: 244 FLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLC 303
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
G ++ ++L ++ K +P+ ++YN L A Q + A AF+EL + PD
Sbjct: 304 RRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA-MAFVELMVSSGCYPDI 362
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+SY+TL + + + A L +++ + C ++Y++++ T G +E L + +
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M++ + + Y+ + S L + G E+A + + + + + + N +L R
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
A + +V+ G P +T+ +L G +G +++ E
Sbjct: 483 THSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEARE 523
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 32 ENFFENLPDKMRGPDTCS-ALLHSYVQNKKSAE-AEALMEKMSECGFLKCPLPYNHMLNL 89
E + K R P+ + +L S++ + E A +++++ + G L YN +L+
Sbjct: 277 EKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHA 336
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ ++D+ ++ + PD+V+YN L A + + A + +LK P
Sbjct: 337 FCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 396
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
ISY+T+ K E+A L EM + + + + YS++ S G +E ++ +
Sbjct: 397 LISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFC 456
Query: 209 KMMSLFAKMNDAEYTCVISSLVK 231
K+ + + N Y ++ L K
Sbjct: 457 KVQDMGIRPNTVLYNAILLGLCK 479
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 48/372 (12%)
Query: 47 TCSALLHSYVQNK-KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + ++H Y++ K K A L+E M E G + YN ++N +++G+L+ ++L +
Sbjct: 19 TYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ S ++VTY + A+ + K F E+K P+ +Y+ L Y + L
Sbjct: 79 MKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGL 138
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A EM+ C K+ Y+ +++Y G +++ R+ +M + + Y
Sbjct: 139 FKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNT 198
Query: 225 VISSLVKLGEFEKAENIYDE--------------------------------WESISGTG 252
++ K F KA I E +E++ G
Sbjct: 199 LLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKG 258
Query: 253 DPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
VPNI +L+ Y A ++ ++ G PC + L Y G ++
Sbjct: 259 --VVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQE 316
Query: 308 VLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
L CF+ +RK VPD ++ TA + + G AE L + G V I Y
Sbjct: 317 ALACFQ----DMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYG 372
Query: 365 SLLRTYAKAGKM 376
L+R +A AG++
Sbjct: 373 ILVRAFANAGRL 384
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 26 LQTRARENFFEN---LPDKMRGPDTCSALLHSY-----VQNKKS--AEAEALMEKMSECG 75
+Q R+ F+ L D+M G C+ +H+Y + K+ + E L+++M G
Sbjct: 130 IQGYGRKGLFKEALELYDEMDGVG-CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAE 134
+ YN +L++Y K ++L+E+ + P++ TYN+ L++ + A
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ F LK + P+ ++YS + SLY + L +AA EM + C +AYS L+ Y
Sbjct: 249 QLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESY 308
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+ G E L ++ M + YT ++ + K G +AE +Y E D
Sbjct: 309 GHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDG 368
Query: 255 RVPNILLAAYINRNQL 270
IL+ A+ N +L
Sbjct: 369 ITYGILVRAFANAGRL 384
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 6/272 (2%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPDWISYSTLTSLYIKMEL 164
+K VVTY + + Q K LE +K++ PD I Y+ L + +
Sbjct: 9 MKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGR 68
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E A L +M++ N V Y++L+ Y N G + +++++M N Y
Sbjct: 69 LEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNA 128
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I + G F++A +YDE + + D NI +A Y R LE E + + TKG
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQGDID 343
+ P T+ L Y KK K E ++ R + + ++ ++ K EQ +
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK--EQ-SVA 245
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
A L L++ G V + Y+++L Y + G
Sbjct: 246 EATQLFENLKSKGVVPNIVTYSAMLSLYGRHG 277
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 152/352 (43%), Gaps = 14/352 (3%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+F + + PD T ++++H + EA L ++M + G + YN +++
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313
Query: 91 ISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ ++ L E+ + PDVVTY L A + F ++++ PD
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+T+ K L A L EM R N V YS++L + N+G DE +++K+
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ N ++ ++ L + G +A +++ + N L+ Y R +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A + +V KG P ++ +L GY +M+K + SV+K P+
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQM--SVKKLTPN---- 547
Query: 330 TAAYNKLEEQ----GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
T YN + + G + A+ L + ++G + T + Y+ LL K G +
Sbjct: 548 TVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHL 599
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 147/351 (41%), Gaps = 41/351 (11%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLA 122
A ++ KM + G + + ++N + G++ ++ E+ + PDV++YN +
Sbjct: 147 AVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLIN 206
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ + A F ++++ P+ ++Y+T+ K L A L EM R
Sbjct: 207 GLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPP 266
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMM----------------SLFAK--MNDAE--- 221
+ + Y+S++ +G +E R++K+M SL+ +NDA
Sbjct: 267 DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFL 326
Query: 222 --------------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
YT ++ L LG+ +A ++ + E D N ++ +
Sbjct: 327 SEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+ A F + +V +GI P T+ + G+ GQ+++ + FK+ +G R +P+
Sbjct: 387 RLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG--RNVMPNTL 444
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ + L ++G + A + T+ G V I YN+L+ Y KM
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKG-VEPNIYTYNALMNGYCLRCKM 494
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 3/284 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + D+ P+ T S +LH + + EA L ++M + L ++ +++
Sbjct: 395 FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + + + + +K P++ TYN + + A K F + PD
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLH 514
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY+ L + Y +KA L +M + N V Y++++ +G + ++KKM
Sbjct: 515 SYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S Y+ +++ L K G ++A ++ + D + IL+ +L
Sbjct: 575 CSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKL 634
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
E+A+ +++L GI+P T+ ++ G LK+G ++ E F+K
Sbjct: 635 EVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/264 (17%), Positives = 94/264 (35%), Gaps = 17/264 (6%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A +F + + P + + KM+ +M+ + + L
Sbjct: 75 DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNIL 134
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ + + D + +W KM L + + +T +I+ + G+ + A +Y+E
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D N L+ N MA + ++ G KP T+ + K + ++
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRT 369
+ +G R PD + + L G ++ A L + +N YN
Sbjct: 255 FLSEMVG--RGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN----- 307
Query: 370 YAKAGKMPLIIVERMQKDNVQMDA 393
II++ + KD + DA
Sbjct: 308 ---------IIIDSLYKDRLVNDA 322
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 143/334 (42%), Gaps = 12/334 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S ++H + K EA L +M++ G + YN +++ +DK +L+++
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N PD VTYN + ++ + A + F E+ + P+ ++ ST + K E+
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M + + N ++YS+LL Y G ++ ++ M+ N + +++
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G +A I+++ + D ++ A+ ++ A +N ++ KG++P
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEP 454
Query: 288 CYTTWELLTWGYLKKGQM----EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
+ ++ L G+ G + E V E K +G P + N L ++G +
Sbjct: 455 NFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG------PCILSFASLINHLCKEGRVF 508
Query: 344 GAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
A+ + + +R I+ SL+ Y GKM
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKM 542
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 9/334 (2%)
Query: 49 SALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQ----LDKVPQML 103
S+LL K++ EA + L +M E G + + Y+ +L +G+ LD + +M
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALD-ILRMA 200
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ +VV Y+ + + A F E+ + + P+ ++Y+++ K
Sbjct: 201 VKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKAR 260
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+KA L++M + + V Y++L+ Y+ +G + +R++K+M S N +
Sbjct: 261 AVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCS 320
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
++ L K G E+A +D + + + LL Y L + +N +V
Sbjct: 321 TFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRD 380
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GI P + +L GY K G + + + F+ R PD A + G +D
Sbjct: 381 GIVPNQHVFNILVNGYAKCGMVREAMFIFEDM--QKRGLNPDVLTYLAVIHAFCRMGSMD 438
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
A + + G + +Y L++ + G +
Sbjct: 439 DAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDL 472
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/311 (16%), Positives = 123/311 (39%), Gaps = 5/311 (1%)
Query: 35 FENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F ++ DK P+ L+ + + +AE L+ ++ G C L + ++N
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++ + ++ + + DV + + A + + I+PD ++
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y TL + K + +E+ + + Y +L + G ++++M+
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI 623
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ Y+ +++ L + E+A ++ + +++ D + NI+++ + E
Sbjct: 624 ESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRRE 683
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
AE + + G+ P T+ ++ +K+G +E+ F + S P I
Sbjct: 684 EAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKS--GLSPTSHFINV 741
Query: 332 AYNKLEEQGDI 342
L E+G+I
Sbjct: 742 IVRTLLEKGEI 752
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 123/266 (46%), Gaps = 1/266 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + +AEA+ +M + GF + YN ++ + G K ++ +
Sbjct: 242 DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFER 301
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ P TY + + + A K F E++ K P+ +++ L + + + L
Sbjct: 302 MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 361
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +++++ + AY++L+ Y+ G+ I+ M + + + A Y
Sbjct: 362 CEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 421
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E A+ +++ + + T + +LL+AY ++ E N++ G
Sbjct: 422 MVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 481
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
IKP + Y + GQ EK+ E
Sbjct: 482 IKPDTFVLNSMLNLYGRLGQFEKMEE 507
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 10/323 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y K L+ L+ P TY L L A + E AE F E++
Sbjct: 209 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 268
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K P + Y+ +K +KA + M++ C+ + Y+ L++LY
Sbjct: 269 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 328
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
L+++ +M S K N +T ++++ + G EKAE I+++ + D N L+
Sbjct: 329 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 388
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSV 319
AY A ++ + G +P ++ ++ Y + G E F+ K +G +
Sbjct: 389 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG-I 447
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPL 378
+ H L+ +AY++ G + E ++ + +G T + NS+L Y + G+
Sbjct: 448 TPTMKSHMLLLSAYSR---AGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 504
Query: 379 I--IVERMQKDNVQMDAETQKVL 399
+ ++ M+K D T +L
Sbjct: 505 MEEVLTAMEKGPYPADISTYNIL 527
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL +Y + K A+ E ++ +M + G N MLNLY GQ +K+ ++L ++K
Sbjct: 457 LLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 516
Query: 111 SP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P D+ TYN+ + E+ F L + PD +++++ Y + + +
Sbjct: 517 YPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCL 576
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+EM C + LLS +N EV + + M
Sbjct: 577 EVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTM 617
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE L + PD + AL+ +Y + A + M G YN M++
Sbjct: 366 EEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 425
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + + + +K+ +P + ++ L L+A + E+ ++ K+ I PD
Sbjct: 426 YGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 485
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++ +LY ++ EK L MEK + Y+ L+++Y G+ + +++
Sbjct: 486 TFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 545
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ + + +T I + + ++ + +++E D +LL+A N +
Sbjct: 546 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGD 605
Query: 269 QLE 271
Q++
Sbjct: 606 QIQ 608
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 47 TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYI----SNGQLDKVPQ 101
T + LL +K++++A + ++ +M+E G + YN++LN S L+ +
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHM 183
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M + + PDVV+Y + + D + A + E+ I PD ++YS++ + K
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 243
Query: 162 MELPEKAATTLKE------------MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +K + KE M + + + + YS+L+ Y G DE +++
Sbjct: 244 GQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 303
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S+ K N Y+ +I+ K+ E A ++ E ES + D NI+L +
Sbjct: 304 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 363
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
A+ Y R+ G + +T+ ++ G K + L+ F+
Sbjct: 364 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 407
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 124/314 (39%), Gaps = 53/314 (16%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQMLQE-L 106
LL+ +S EA L+ M++ P + Y ++N + G DK E L
Sbjct: 164 LLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 107 KKNTSPDVVTYNLWLAA-CASQN-DKE----------TAEKAFLELKKTKIDPDWISYST 154
+ PDVVTY+ +AA C Q DK +EK F + + + PD I+YST
Sbjct: 224 DRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 283
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L Y ++A L M + N V YS+L++ Y + ++ L ++K+M S
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 343
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG---------------------- 252
+ Y ++ L + A+ +Y SGT
Sbjct: 344 VSPDIITYNIILQGLFQTRRTAAAKELYVRITE-SGTQIELSTYNIILHGLCKNKLTDDA 402
Query: 253 --------------DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ R NI++ A + + + A+ + + G+ P Y T+ L+
Sbjct: 403 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 462
Query: 299 YLKKGQMEKVLECF 312
+ +G +E++ + F
Sbjct: 463 IIGQGLLEELDQLF 476
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/227 (18%), Positives = 93/227 (40%), Gaps = 3/227 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L+ Y K EA L+ M G + Y+ ++N Y +++ +
Sbjct: 276 PDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 335
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E++ + SPD++TYN+ L A++ ++ + ++ + +Y+ + K
Sbjct: 336 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 395
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+L + A + + + ++ ++ +G DE ++ S N
Sbjct: 396 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 455
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
Y + +++ G E+ + ++ E T D + N ++ + R
Sbjct: 456 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 502
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 126/292 (43%), Gaps = 7/292 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +LLH + + +A +L+ M + G+ + YN +++ NG+L+ ++L E+
Sbjct: 143 TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK DVVTYN L A + ++ K I+PD ++++ L +++K
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL 262
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A KEM + + N V Y+S+++ G + + + M S N Y +
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS K ++ ++ D N L+ Y +L +A + +V++ +
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECF------KKAIGSVRKWVPDHRLITA 331
P T +L G G++E L F +K IG V + H L A
Sbjct: 383 TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 8/213 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P +VT+ L N A + + K+ +P+ + Y+TL K
Sbjct: 133 MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL 192
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L EMEK+ + V Y++LL+ G + R+ + MM + +T +
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN----RNQLEMAESFYNRLV 281
I VK G ++A+ +Y E I + DP N+ + IN +L A+ ++ +
Sbjct: 253 IDVFVKQGNLDEAQELYKEM--IQSSVDPN--NVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+KG P T+ L G+ K +++ ++ F++
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +L+ + + EA L +KM E G + + YN +++ Y + G L++
Sbjct: 241 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 300
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+ KK P V TYNL + A + A+ E++K I PD I+Y+ L + Y +
Sbjct: 301 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A EM + V Y+SL+ + + E +++K++ +
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I G E+A + E + S D N L+ ++E A + +
Sbjct: 421 FNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 480
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+GIKP + ++ L GY ++G ++
Sbjct: 481 XRGIKPDHISYNTLISGYGRRGDIKDAF 508
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+H+ + EA+ ++++M + G + + YN ++N Y G + + E
Sbjct: 315 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P VTY + + +N + A+ F ++ + PD I ++ + +
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A LKEM++++ + V +++L+ G +E + +M K + Y +
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS + G+ + A + DE SI N L+ + ++AE +V KGI
Sbjct: 495 ISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 554
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
P +T+ L G G ++ ++E
Sbjct: 555 SPDDSTYLSLIEGM---GNVDTLVE 576
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+VV+YN + +S+ + E A + ++ I+PD +Y +L S K E+A+
Sbjct: 206 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 265
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMG-------YKDEVLRIWKKMMSLFAKMNDAEYTC 224
+M + N V Y++L+ Y N G Y+DE+++ K +M + Y
Sbjct: 266 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK--KGIMPSVST-----YNL 318
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ +L G +A+++ E D NIL+ Y + A +N +++KG
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I+P + T+ L + ++ +M++ + F+K + + PD + A + G+++
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD--QGVSPDVIMFNAMIDGHCANGNVER 436
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A LL + E+ +N+L++ + GK+
Sbjct: 437 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 469
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 148/331 (44%), Gaps = 29/331 (8%)
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTY 117
KK+ E ME + GF + YN +++ Y S G ++ ++L ++ K PD TY
Sbjct: 190 KKAREFIGFMEGL---GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
++ + E A F ++ + + P+ ++Y+TL Y E+A + EM K
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 178 RTCRKNRVAYSSL---LSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLG 233
+ + Y+ L L + MG D++++ +K + DA Y +I+ + G
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK----GIIPDAITYNILINGYSRCG 362
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
++A ++++E S L+ RN+++ A+ + +++ +G+ P +
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE----QGDIDGAEHLL 349
+ G+ G +E+ K+ RK VP + +N L + +G ++ A LL
Sbjct: 423 AMIDGHCANGNVERAFMLLKEM---DRKSVPPDEV---TFNTLMQGRCREGKVEEARMLL 476
Query: 350 VTLRNAG----HVSTEIYNSLLRTYAKAGKM 376
++ G H+S YN+L+ Y + G +
Sbjct: 477 DEMKXRGIKPDHIS---YNTLISGYGRRGDI 504
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 128/288 (44%), Gaps = 2/288 (0%)
Query: 29 RARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+A++ FFE + + T + L+H +N + + EKM E G YN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
N +G+ ++ E++ + S ++VTYN + + A + ++K I+
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ I+Y+TL + + KA + ++++ R + V Y+ L+S + G ++
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
K+M K + YT +I + + EKA + E + T D ++L+ +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ ++ A + +V K +P + + GY K+G + L F++
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFRE 503
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 147/354 (41%), Gaps = 7/354 (1%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
++++YVQ++ + +M + GF+ +N++L + + ++ E K
Sbjct: 99 VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK 158
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
DV ++ + + C + E + +EL++ P+ + Y+TL K EKA
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM K N Y+ L+ G K + +++KM N Y CV++ L
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQL 278
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + A ++DE + + N L+ + A +++ + GI P
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNL 338
Query: 290 TTWELLTWGYLKKGQMEKVLE-CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L G+ ++ K L C + + + ++ + + K +GD GA +
Sbjct: 339 ITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCK---KGDTSGAGKV 395
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLIIVER--MQKDNVQMDAETQKVL 399
+ + G +++ Y L+ T+A++ M I R M++ + D T VL
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 20/307 (6%)
Query: 2 ERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD------TCSALLHSY 55
E+ + HG +Y + Q R ++ F + D+MR T + L+
Sbjct: 257 EKMQEHGVFPNLHTYNCVMNQL-CKDGRTKDAF--KVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 56 VQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDV 114
+ K+ EA +M++M G + YN +++ + +L K + ++LK + SP +
Sbjct: 314 CREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSL 373
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
VTYN+ ++ + D A K E+++ I P ++Y+ L + + + EKA
Sbjct: 374 VTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSS 433
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
ME+ + YS L+ + G +E R++K M+ + N+ Y ++ K G
Sbjct: 434 MEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGS 493
Query: 235 FEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+A ++ E E PN+ ++ + + AE +++ GI P
Sbjct: 494 SYRALRLFREMEE-----KELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSD 548
Query: 290 TTWELLT 296
+ L++
Sbjct: 549 SILNLIS 555
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 146/339 (43%), Gaps = 16/339 (4%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E + + ++ PD T SAL++++V+ K EAE L ++M + + Y+ M++
Sbjct: 308 EQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDG 367
Query: 90 YISNGQLDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ +LD M K SPD++T+N +A + K E+ + + +
Sbjct: 368 FCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
I+Y+TL + ++ A L+EM N V ++LL + G + L ++K
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487
Query: 209 KM----MSLFAK--MNDAE-----YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
M M + A N E Y +I L+ G+F +AE +Y+E D
Sbjct: 488 AMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
+ ++ +++L+ A ++ + +K P T+ L GY K G ++ LE F +
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEM-- 605
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
R V D + +IDGA + + ++G
Sbjct: 606 GQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG 644
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 146/331 (44%), Gaps = 15/331 (4%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVV 115
++ + ++A L +M E + YN M+N + +G+ Q+LQE L++ +PDVV
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVV 324
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
T++ + A + AE+ + E+ I P ++YS++ + K + A
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLT 384
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ C + + +++L++ Y D+ +++ +M N YT +I ++G+
Sbjct: 385 PTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 444
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT-----------KG 284
A+++ E S + N LL + +L+ A + + G
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG 504
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
++P T+ +L G + +G+ + E +++ R VPD ++ + L +Q +D
Sbjct: 505 VEPDVQTYNILICGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
A + ++ + + +N+L+ Y KAG
Sbjct: 563 ATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 149/352 (42%), Gaps = 42/352 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + + EA AL+++M E G + Y +++ G +L+++
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243
Query: 107 KK--NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ + P+VV YN + A F+E+++ +I PD ++Y+ + + +
Sbjct: 244 EEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGR 303
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
A L+EM +R + V +S+L
Sbjct: 304 WSDAEQLLQEMLERKINPDVVTFSAL---------------------------------- 329
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I++ VK G+F +AE +YDE S + ++ + +N+L+ AE + TKG
Sbjct: 330 -INAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG 388
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P T+ L GY + +++ ++ + + V + T + + GD++
Sbjct: 389 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEM--TEAGLVANTITYTTLIHGFCQVGDLNA 446
Query: 345 AEHLLVTLRNAGHVSTEIY-NSLLRTYAKAGKM--PLIIVERMQKDNVQMDA 393
A+ LL + ++G + N+LL GK+ L + + MQK + +DA
Sbjct: 447 AQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 498
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 125/305 (40%), Gaps = 17/305 (5%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A E+ F P K PD T + L+ Y + K+ + L+ +M+E G + + Y ++
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435
Query: 88 NLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ + G L+ +LQE + P+VVT N L + A + F ++K+K+D
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495
Query: 147 -----------PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
PD +Y+ L I +A +EM R + + YSS++
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
DE +++ M S + + +I+ K G + ++ E D
Sbjct: 556 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAI 615
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLECF 312
L+ + + ++ A + +++ G+ P T + G K ++E+ +LE
Sbjct: 616 TYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Query: 313 KKAIG 317
+ ++G
Sbjct: 676 QMSVG 680
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 120/286 (41%), Gaps = 14/286 (4%)
Query: 98 KVPQMLQELKKNT----SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
K+P L K T P VVT+N L ++ A F ++ K P+ ++++
Sbjct: 131 KLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFT 186
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
TL + + +A L M + + N++ Y +++ MG L + +KM +
Sbjct: 187 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 246
Query: 214 FAKM-NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ N Y +I L K G A N++ E + D N ++ + +
Sbjct: 247 SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSD 306
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
AE ++ + I P T+ L ++K+G+ + E + + + R +P ++
Sbjct: 307 AEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP--RSIIPSTVTYSSM 364
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ +Q +D AEH+ G S +I +N+L+ Y +A ++
Sbjct: 365 IDGFCKQNRLDAAEHMFYLTPTKG-CSPDIITFNTLIAGYCRAKRV 409
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 5/277 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + L+ + +EA + E M+E G YN +++ Y + Q+D+ ++
Sbjct: 304 PDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKV 363
Query: 103 LQ-ELKKNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
L + K +P++ +YN+ + C S+ E A++ E+ + + PD ++YSTL
Sbjct: 364 LGIMIGKGCAPNLSSYNILINGYCKSKRMNE-AKRLLSEMSEKNLTPDTVTYSTLMQGLC 422
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
++ P +A KEM + +AYS LL + G+ DE L++ K+M K N
Sbjct: 423 QVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNII 482
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
YT +I + G+ E A+ ++ + + D N+++ + + A F+ ++
Sbjct: 483 LYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM 542
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
G P ++ ++ G+L+ ++ + +G
Sbjct: 543 EDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVG 579
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 138/315 (43%), Gaps = 4/315 (1%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLA 122
A ++M KM + G + +N ++N + G++ + + E+ P+V++YN +
Sbjct: 150 AVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVIN 209
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ A + F ++++ + P+ ++Y+T+ K L +A L EM R
Sbjct: 210 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ V Y+++L + ++G +E R++K+M+ + + ++ L K G +A +
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ + N L+ Y NQ++ A ++ KG P +++ +L GY K
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
+M + + S + PD + L + G A +L + ++G + +
Sbjct: 390 KRMNEAKRLLSEM--SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLM 447
Query: 363 -YNSLLRTYAKAGKM 376
Y+ LL + K G +
Sbjct: 448 AYSILLDGFCKHGHL 462
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 48/310 (15%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ S +++ EA + +M + G + YN +L+ + S GQL++ ++ +E+
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297
Query: 107 -KKNTSPDVVTYNLWL-----------AACASQ------------------------NDK 130
+N PD VT+N+ + A C S+ N
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A K + P+ SY+ L + Y K + +A L EM ++ + V YS+L
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ +G E L ++K+M S + Y+ ++ K G ++A + E
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH---- 473
Query: 251 TGDPRV-PNILLAAYINR-----NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ R+ PNI+L + R +LE+A+ +++L GI+P T+ ++ G LK+G
Sbjct: 474 --ERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGL 531
Query: 305 MEKVLECFKK 314
++ E F+K
Sbjct: 532 SDEAYEFFRK 541
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 125/297 (42%), Gaps = 6/297 (2%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +++ + +++ + L E+ + PDVVTYN L S A + F E
Sbjct: 237 VTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKE 296
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + PD ++++ L K + +A + M ++ N Y++L+ Y
Sbjct: 297 MVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ 356
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
DE +++ M+ N + Y +I+ K +A+ + E + T D +
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L+ + A + + + + G+ P + +L G+ K G +++ L+ K+
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM--HE 474
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
R+ P+ L T + G ++ A+ L L G + +I YN +++ K G
Sbjct: 475 RRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG-IRPDIWTYNVMIKGLLKEG 530
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 144/362 (39%), Gaps = 10/362 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L++ K EA L +M G + YN ++N NG ++
Sbjct: 164 PDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRV 223
Query: 103 LQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++++N P+VVTYN + + A + E+ I PD ++Y+T+ +
Sbjct: 224 FRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCS 283
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +A KEM R + V ++ L+ G E + + M A+ N
Sbjct: 284 LGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYT 343
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y ++ + ++A + + NIL+ Y ++ A+ + +
Sbjct: 344 YNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMS 403
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
K + P T+ L G + G+ + L FK+ S +PD + + + G
Sbjct: 404 EKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSS--GLLPDLMAYSILLDGFCKHGH 461
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQK 397
+D A LL + + I Y L+R AGK+ + + ++ D ++ D T
Sbjct: 462 LDEALKLLKEMHER-RIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYN 520
Query: 398 VL 399
V+
Sbjct: 521 VM 522
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 135/325 (41%), Gaps = 14/325 (4%)
Query: 53 HSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSP 112
H ++ E +L +K CGF N ++ I D + + ++ N P
Sbjct: 46 HHHITTSACTEKPSLPQK--HCGF-----GSNTSNDISID----DALTSFYRMVRMNPRP 94
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
VV + +L + A + +A ++ + + S + L + ++ + A + +
Sbjct: 95 SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
+M K + + + +++L++ N G E + ++ +M+ + N Y VI+ L K
Sbjct: 155 GKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKN 214
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
G A ++ + E G + N ++ + + A F + +V +GI P T+
Sbjct: 215 GNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTY 274
Query: 293 ELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
+ G+ GQ+ + FK+ +G R +PD + L ++G + A + T+
Sbjct: 275 NTILHGFCSLGQLNEATRLFKEMVG--RNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332
Query: 353 RNAG-HVSTEIYNSLLRTYAKAGKM 376
G + YN+L+ Y +M
Sbjct: 333 TEKGAEPNAYTYNALMDGYCLHNQM 357
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 84/213 (39%), Gaps = 42/213 (19%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT S L+ Q + EA L ++M G L + Y+ +L+ + +G LD+ ++
Sbjct: 409 PDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKL 468
Query: 103 LQELKK------------------------------------NTSPDVVTYNLWLAACAS 126
L+E+ + PD+ TYN+ +
Sbjct: 469 LKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLK 528
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ + A + F +++ PD SY+ + +++ + A + EM + +
Sbjct: 529 EGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSST 588
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+ LL L ++ DE++ + + S KMND
Sbjct: 589 FQMLLDLESH----DEIISRFMRGSSQHTKMND 617
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 156/360 (43%), Gaps = 10/360 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV++A L R E + PD + T + L++ + K AEA L++KM E G
Sbjct: 271 RVSEALELVDRMVE--MGHKPDLI----TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 324
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ Y +LN+ +GQ ++L+++ ++N D V Y++ + + A F
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E++ I + I+Y+ L + + A L++M KR N V +S L+ +
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 444
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G E + K+M+ + YT +I K +KA + D S + R
Sbjct: 445 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 504
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
NIL+ Y N+++ + ++ +G+ T+ L G+ + G++ E F++ +
Sbjct: 505 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 564
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
RK P+ + L + G+ + A + + ++ + IYN ++ A K+
Sbjct: 565 --RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 622
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 155/359 (43%), Gaps = 10/359 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L+ ++ ++A A L+ KM E + Y+ +++ +G LD + E+
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K + +++TYN+ + + + K ++ K KI+P+ +++S L ++K
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A KEM R + + Y+SL+ + + D+ ++ M+S N + +
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ K + ++ + D N L+ + +L +A+ + +V++ +
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 567
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+++L G G+ EK LE F+K S K D + + + +D A
Sbjct: 568 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKS--KMELDIGIYNIIIHGMCNASKVDDA 625
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPL----IIVERMQKDNVQMDAETQKVL 399
L +L G + YN ++ K G PL ++ +M++D D T +L
Sbjct: 626 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKG--PLSEAELLFRKMEEDGHAPDGWTYNIL 682
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 167/399 (41%), Gaps = 11/399 (2%)
Query: 9 AQVRAQSYRQRVAQAQALQTRARE--NFFENLPDKMRGPDTC--SALLHSYVQNKKSAEA 64
A R SYR+R+ ++ + +A + + F ++ P S L + + K+
Sbjct: 147 ANDRNLSYRERL-RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 205
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLD-KVPQMLQELKKNTSPDVVTYNLWLAA 123
AL ++M G + M+N + +L M + +K P+ +T++ +
Sbjct: 206 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 265
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
+ A + + + PD I+ +TL + +A + +M + C+ N
Sbjct: 266 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 325
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y +L++ G + + +KM K++ +Y+ +I L K G + A N+++
Sbjct: 326 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 385
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
E E T + NIL+ + N + + ++ + I P T+ +L ++K+G
Sbjct: 386 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 445
Query: 304 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEI 362
++ + E K+ I R PD T+ + ++ +D A ++ + + G +
Sbjct: 446 KLREAEELHKEMIH--RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 503
Query: 363 YNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKVL 399
+N L+ Y KA ++ L + +M V D T L
Sbjct: 504 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 36/256 (14%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ S+V+ K EAE L ++M G + Y +++ + LDK QM+ +
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 492
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P++ T+N+ + N + + F ++ + D ++Y+TL + ++
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 552
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------------- 210
A +EM R N V Y LL + G ++ L I++K+
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 612
Query: 211 ---MSLFAKMNDA-----------------EYTCVISSLVKLGEFEKAENIYDEWESISG 250
M +K++DA Y +I L K G +AE ++ + E
Sbjct: 613 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 672
Query: 251 TGDPRVPNILLAAYIN 266
D NIL+ A++
Sbjct: 673 APDGWTYNILIRAHLG 688
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 153/376 (40%), Gaps = 51/376 (13%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+H Q +K EA L EKM+E G + Y+ +L Y NG +D+ ++
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID--------------- 146
E+ K +P+VVTY + ++ + A E+K+ +
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503
Query: 147 --------------------PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
P ++Y+++ + +IK + A ++M + N V
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVT 563
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+S + Y D L++ + + + A Y +I + G A +
Sbjct: 564 YTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL---- 619
Query: 247 SISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ D +PNI + Y N +E A FY +++ +GI T+ L G+ K
Sbjct: 620 -VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSK 678
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVST 360
G + L+ + + + + +PDH TA + L GDID A LL + R +
Sbjct: 679 DGNVTFALKLYSEMVA--KGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736
Query: 361 EIYNSLLRTYAKAGKM 376
+YN L+ Y + GK+
Sbjct: 737 LMYNMLINGYLRNGKL 752
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 154/381 (40%), Gaps = 18/381 (4%)
Query: 29 RARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+A + F E L D + D T + L+ + +A L +M + G L +N ++
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 88 NLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
+++ + +E+ + PD TYN+ + + A + ++ +T + P
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
++Y +L Y ++A EM + N V Y++L+ + N D+ +
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+M ND Y +I+ L +G + + +E+ N ++ +I
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPD 325
+ A + Y ++ KGI P T+ GY K + L K + VR PD
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL----KMLNDVRCKGLRPD 595
Query: 326 HRLITAAYNKLE----EQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PL 378
AAYN L ++G++ A +LV + G + + +YNS + Y M L
Sbjct: 596 ----IAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651
Query: 379 IIVERMQKDNVQMDAETQKVL 399
E+M K+ + +D T L
Sbjct: 652 RFYEKMIKEGIDLDTATYTTL 672
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 119/280 (42%), Gaps = 3/280 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + E ++++ GF+ + YN ++N +I G + + Q++
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P++VTY ++ + + A K +++ + PD +Y++L + +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNM 612
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L M K N Y+S ++ Y N+ +E LR ++KM+ ++ A YT +
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTL 672
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G A +Y E + D L ++ A + + I
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+P + +L GYL+ G++++ + + RK +PD
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLE--RKIMPD 770
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 147/359 (40%), Gaps = 31/359 (8%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+ +P PD CS + S + + + A ++ KM + GF+ +N ++++ +
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLV 258
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++++ + E L VV + Q + A F E + + P +
Sbjct: 259 KGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDV 318
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L + +PEKA ++M + ++ ++ N ++WK
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLND-------KLWKDA 371
Query: 211 MSLFAKMNDA------EYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--NILL 261
+SLF +M D+ Y +I L + + +A N+ WE ++ TG P + + LL
Sbjct: 372 VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNL---WEKMNETGVKPYIVTYHSLL 428
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLECFKKAIGS 318
Y ++ A Y + KG P T+ L G++ K +K +L K+ S
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ + + N L G + +L G V T + YNS++ + KAG M
Sbjct: 489 CNDYTYNTLI-----NGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++++ +++ A A+ ++M G + Y ++ Y D +ML ++
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDV 587
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PD+ YN + + + A + + + K + P+ Y++ + Y +++
Sbjct: 588 RCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A ++M K + Y++L+ ++ G L+++ +M++ + +T +
Sbjct: 648 EEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
L + G+ + A + DE + + + N+L+ Y+ +L+ A ++ ++ + I
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767
Query: 286 KPCYTTWELLT 296
P TT+++L
Sbjct: 768 MPDDTTYDILV 778
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 33/288 (11%)
Query: 105 ELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E++ P D +++ + AC + + A + F E+ ++I+PD S + K+
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A L++M+ ++S++ + G +E L I ++++ KM+ T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-----NILLAAYINRNQLEMAESFYN 278
++ E KA +I++E D VP +L+ E A
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLR-----DGLVPTDVTYTVLIRGCTEEGMPEKAYELCR 341
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS----------VRKWVPDHRL 328
++ G+ P + ++ G L + + FK+ S + W+ R
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRK 401
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
I A N E+ + G + +VT Y+SLL Y G M
Sbjct: 402 IREALNLWEKMNET-GVKPYIVT-----------YHSLLLCYCVNGCM 437
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 165/405 (40%), Gaps = 49/405 (12%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F + +K+ GP S ++ + + A + M + G L YN +L+
Sbjct: 259 FLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCV 318
Query: 93 NGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +D+ +++K+ PDVVTYN A K ++ ++PD ++
Sbjct: 319 AGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVT 378
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + +M E+A +E R + N + Y+ LLS +G +E L ++ +M
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438
Query: 212 SLFAKMNDAEYTCVISSLVK------------------------------LGEFE----- 236
+L + + Y+ +I L K LG F+
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
+A N +D W + D + NI++ Y+ + + A Y +++ +GI P T+ L
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558
Query: 297 WGYLKKGQM---EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
G+ ++G + K+LE + ++ VP T N E G++ H L +
Sbjct: 559 NGFCRRGDLMEARKMLEVIR-----LKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME 613
Query: 354 NAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
V T + Y L++ + KM L ++E M + D+ T
Sbjct: 614 ANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVT 658
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 153/369 (41%), Gaps = 44/369 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQMLQ 104
T S L+H + K +A + + ++ + P + N +++ + G +D
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNK---VVGPSIVSINTIMSKFCKVGLIDVARSFFC 295
Query: 105 ELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ KN D +YN+ L + A +++K ++PD ++Y+TL ++ +
Sbjct: 296 LMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLG 355
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
L A +++M + + V Y++L+ + MG +E L++ ++ +S K+N Y
Sbjct: 356 LMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYN 415
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY------ 277
++S L K+G E+A ++DE E++ D V +IL+ ++ A Y
Sbjct: 416 MLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK 475
Query: 278 --------NRLVTKGI---------KPCYTTW------------ELLTWGYLKKGQMEKV 308
R V G+ + + TW ++ GY++ + +
Sbjct: 476 RKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
++ + K I R P N +GD+ A +L +R G V S Y +L+
Sbjct: 536 MQLYYKMIE--RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 368 RTYAKAGKM 376
Y + G M
Sbjct: 594 NAYCEVGNM 602
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 139/332 (41%), Gaps = 14/332 (4%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ----E 105
A+L +N +EA + + ++ + YN M++ Y+ +LD + + +Q
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV---RLDGIAEAMQLYYKM 542
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ +P VVT+N + + D A K ++ + P ++Y+TL + Y ++
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ L EME V Y+ L+ E L++ + M + + Y +
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPR--VPNILLAAYINRNQLEMAESFYNRLVTK 283
I K E KA +Y+ + DP +L+ A L+ + + +
Sbjct: 663 IQCFCKGKEITKALQLYNMM--LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDR 720
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
I T+ + + KGQ+ K L F + + + +V R +A N+L ++G I
Sbjct: 721 NITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLA--KGFVISIRDYSAVINRLCKRGLIT 778
Query: 344 GAEHLLVTLRNAGHV-STEIYNSLLRTYAKAG 374
A++ V + + G EI ++L + + G
Sbjct: 779 EAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 36/219 (16%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ-E 105
T + L+ + K E+ L+E M G L + YN ++ + ++ K Q+
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L N P VTY + + A D + ++ + ++ I ++Y T+
Sbjct: 683 LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTII--------- 733
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
K C K +V S L + M K V+ I +Y+ V
Sbjct: 734 -----------KAHCAKGQV--SKALGYFNQMLAKGFVISI-------------RDYSAV 767
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
I+ L K G +A+ + S T DP + +L A+
Sbjct: 768 INRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 123/266 (46%), Gaps = 1/266 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + +AEA+ +M + GF + YN ++ + G K ++ +
Sbjct: 204 DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFER 263
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ P TY + + + A K F E++ K P+ +++ L + + + L
Sbjct: 264 MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 323
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +++++ + AY++L+ Y+ G+ I+ M + + + A Y
Sbjct: 324 CEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 383
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E A+ +++ + + T + +LL+AY ++ E N++ G
Sbjct: 384 MVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 443
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
IKP + Y + GQ EK+ E
Sbjct: 444 IKPDTFVLNSMLNLYGRLGQFEKMEE 469
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 10/323 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y K L+ L+ P TY L L A + E AE F E++
Sbjct: 171 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 230
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K P + Y+ +K +KA + M++ C+ + Y+ L++LY
Sbjct: 231 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 290
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
L+++ +M S K N +T ++++ + G EKAE I+++ + D N L+
Sbjct: 291 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 350
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSV 319
AY A ++ + G +P ++ ++ Y + G E F+ K +G +
Sbjct: 351 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG-I 409
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPL 378
+ H L+ +AY++ G + E ++ + +G T + NS+L Y + G+
Sbjct: 410 TPTMKSHMLLLSAYSR---AGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 466
Query: 379 I--IVERMQKDNVQMDAETQKVL 399
+ ++ M+K D T +L
Sbjct: 467 MEEVLTAMEKGPYPADISTYNIL 489
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL +Y + K A+ E ++ +M + G N MLNLY GQ +K+ ++L ++K
Sbjct: 419 LLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 478
Query: 111 SP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P D+ TYN+ + E+ F L + PD +++++ Y + + +
Sbjct: 479 YPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCL 538
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+EM C + LLS +N EV + + M
Sbjct: 539 EVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTM 579
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE L + PD + AL+ +Y + A + M G YN M++
Sbjct: 328 EEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 387
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + + + +K+ +P + ++ L L+A + E+ ++ K+ I PD
Sbjct: 388 YGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 447
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++ +LY ++ EK L MEK + Y+ L+++Y G+ + +++
Sbjct: 448 TFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 507
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ + + +T I + + ++ + +++E D +LL+A N +
Sbjct: 508 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGD 567
Query: 269 QLE 271
Q++
Sbjct: 568 QIQ 570
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 10/299 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT----SPDVVTYNLWLAACASQNDKETAEKAFL 138
+N ++ + G LDK + L ++ + + +VT L C E AE F
Sbjct: 274 WNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGR---TEEAEAIFE 330
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E++ + P +Y+ L Y+K L A + EME+ N YS L+ Y N
Sbjct: 331 EMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAE 390
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+ + K+M + + N ++ +++S GE++K + E E D N
Sbjct: 391 RWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYN 450
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+L+ + N L+ A + ++R++++GI+P TW L + K G+ ++ E F++ +
Sbjct: 451 VLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMME- 509
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ ++P + N +Q D ++LL +R+ G + + Y +L+ Y K+G+
Sbjct: 510 -KGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRF 567
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 156/344 (45%), Gaps = 6/344 (1%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYN 118
++ EAEA+ E+M + G YN +L Y+ G L ++ E++++ P+ TY+
Sbjct: 321 RTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYS 380
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
L + A + E+A E++ + + P+ +S + + Y +K L+EME
Sbjct: 381 LLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS 440
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
R +R+ Y+ L+ + D + + +M+S + + + ++ K G+ ++A
Sbjct: 441 GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRA 500
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
E +++E NI++ ++ ++ + + ++ + ++G+ P T+ L
Sbjct: 501 EELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDI 560
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-H 357
Y K G+ + +EC + K P + A N ++G D A +R+ G
Sbjct: 561 YGKSGRFDDAIECLDDMKAAGLK--PSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLK 618
Query: 358 VSTEIYNSLLRTYAKAGK--MPLIIVERMQKDNVQMDAETQKVL 399
S NSL+ + K + ++++ M++++++ D T L
Sbjct: 619 PSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTL 662
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + L+ + + K AE L E+M E G+L C +N M+N + + D V +
Sbjct: 479 PDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNL 538
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L ++ + P+ VTY + + A + ++K + P Y+ L + Y +
Sbjct: 539 LTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQ 598
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
L ++A + M + + +A +SL++ + E + + M K +
Sbjct: 599 RGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVT 658
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
YT ++ +L+ + +F+K ++Y+E
Sbjct: 659 YTTLMKALILVEKFDKVPSVYEE 681
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 122/291 (41%), Gaps = 4/291 (1%)
Query: 1 MERRRPHGAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQ 57
E R +G Q R ++Y + +A R E + P+ T S L+ +Y
Sbjct: 329 FEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGN 388
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVT 116
++ A ++++M ++ +L Y G+ K Q+L+E++ + PD +
Sbjct: 389 AERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIF 448
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
YN+ + N + A F + I+PD I+++TL + K ++A +EM
Sbjct: 449 YNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMM 508
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
++ ++ +++ + + D+V + M S N YT +I K G F+
Sbjct: 509 EKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFD 568
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
A D+ ++ + N LL AY R + A S + + G+KP
Sbjct: 569 DAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKP 619
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 125/312 (40%), Gaps = 10/312 (3%)
Query: 94 GQLDKVPQ-MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ +K+ + L K+N +P +TYN ++ACA ND E A +++ D ++Y
Sbjct: 180 GQSEKLYEAFLLSQKQNLTP--LTYNALISACARNNDIEKALNLICRMREDGYPSDLVNY 237
Query: 153 STLTSLYIKMELPEKAAT--TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
S + +K + +E+++ + ++ ++ + G D+ L +
Sbjct: 238 SLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVV 297
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ A VI L G E+AE I++E R N LL Y+ L
Sbjct: 298 QGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLL 357
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
AE + + G+ P T+ LL Y + E K+ S + P+ + +
Sbjct: 358 RDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQ--PNAYVFS 415
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
++G+ +L + ++G I YN L+ T+ K + + +RM +
Sbjct: 416 RILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSE 475
Query: 388 NVQMDAETQKVL 399
++ D T L
Sbjct: 476 GIEPDTITWNTL 487
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 152/335 (45%), Gaps = 10/335 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + K A ++M ECG P+ Y +++ + +G++D +
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+ +++ +P+V +YN + + +N AEK ++ + + P+ I+Y+TL +
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A +MEKR C N YSSL+ G DE ++M + +
Sbjct: 596 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDT 651
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ ++S L + G F +AE + + + D + LL A+ +++ A ++ +
Sbjct: 652 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 711
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
KG + + + L K GQ+E+ F + ++W D + T + L ++G+
Sbjct: 712 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE--KEWNADEIVWTVLVDGLLKEGE 769
Query: 342 IDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
+D LL + + + + Y L R ++ GK
Sbjct: 770 LDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 804
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 164/392 (41%), Gaps = 49/392 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QE 105
+C+ LL + + A L ++M G L +N ++N+ G++ + +L Q
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224
Query: 106 LKKNTSPDVVTY-NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT-------- 156
+ + SPDV TY +L L C ++N + A F + K DP+ ++YSTL
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRN-LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGR 283
Query: 157 ---SLYIKMELPEKA------------------------ATTLKEMEKRTCRKNRVAYSS 189
+L + E+ EK + M+KR CR N Y++
Sbjct: 284 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 343
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L+S + +G + + ++ KM+ N Y +I+ L G F A I+ E
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME--- 306
+ + N ++ +E A + +++ G P T+ L GYL KG +
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNS 365
++L+ K+ +W + + + ++K G ++ A + G + Y +
Sbjct: 464 RLLDLMKENGCEPDEWTYNE--LVSGFSK---WGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 366 LLRTYAKAGK--MPLIIVERMQKDNVQMDAET 395
L+ ++K GK + L +++RM++ + E+
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 154/380 (40%), Gaps = 21/380 (5%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQAL-QTRARENFFENLPDKMRGPDTCS--ALLHSYVQNK 59
R + G + Q+Y ++ L + + + + P+T + AL++
Sbjct: 328 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYN 118
+ + A + M G L YN ++ G ++K + ++ LK P VVTYN
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ ++ + A + +K+ +PD +Y+ L S + K E A+ +EM +
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
N V+Y++L+ ++ G D L + K+M + N Y VI+ L K F +A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567
Query: 239 ENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
E I D+ +PN+ L+ + + A ++ + + P T+
Sbjct: 568 EKICDKM-----VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
L +G ++G+ ++ IG P + + L +G AE L+ ++
Sbjct: 623 SLIYGLCQEGKADEAER--MSEIGC----EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676
Query: 354 NAGHV-STEIYNSLLRTYAK 372
G EIY SLL + K
Sbjct: 677 ERGFCPDREIYYSLLIAHCK 696
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 162/361 (44%), Gaps = 10/361 (2%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T A++ + + ++ EAEAL E++ E G YN +L Y+ G L ++
Sbjct: 292 PSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVS 351
Query: 105 ELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E++K PD TY+L + A A E+A E++ + ++P+ YS + + Y
Sbjct: 352 EMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKG 411
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+K+ LK+M+ + +R Y+ ++ + D + +++M+S + + +
Sbjct: 412 EWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWN 471
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I+ K G AE ++ E + + NI++ + + + E F +++ ++
Sbjct: 472 TLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQ 531
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G+ P T+ L Y K G+ +EC + K+ G + P + A N ++G
Sbjct: 532 GLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG----FKPTSTMYNALINAYAQRGL 587
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKV 398
+ A + + G + + NSL+ + + +++ M+++N++ D T
Sbjct: 588 SELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTT 647
Query: 399 L 399
L
Sbjct: 648 L 648
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 13/293 (4%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI---KMELP--EKAA 169
+TYN + ACA D E A ++++ PD+++YS++ K++ P +K
Sbjct: 186 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 245
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T E+E + + ++ ++ G +R S + VI +L
Sbjct: 246 T---EIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILAL 302
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G +AE +++E R N LL Y+ L+ AE + + G+KP
Sbjct: 303 GNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDE 362
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ LL Y G+ E K+ S + P+ + + ++G+ + +L
Sbjct: 363 QTYSLLIDAYAHAGRWESARIVLKEMEASNVE--PNSYVYSRILASYRDKGEWQKSFQVL 420
Query: 350 VTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+++ G YN ++ T+ K + + ERM + ++ D T L
Sbjct: 421 KDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTL 473
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 3/232 (1%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + + PDT + L++ + ++ + AE L +M + G+ C YN M+N
Sbjct: 455 FERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGE 514
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ ++V L +++ + P+ +TY + A + LK T P
Sbjct: 515 QQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTM 574
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L + Y + L E A + M + +A +SL++ + E + + M
Sbjct: 575 YNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMK 634
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ + YT ++ +L+++ +F+K +Y+E + T D + +L +A
Sbjct: 635 ENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSA 686
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 122/304 (40%), Gaps = 14/304 (4%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQN--DKETAEKA 136
PL YN ++ NG ++K ++ +++++ PD V Y+ + N D +K
Sbjct: 185 PLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKL 244
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ E++ KI+ D + + + K P +A L + +++ N
Sbjct: 245 YTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGN 304
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G E +++++ ++ Y ++ VK G + AE + E E D +
Sbjct: 305 SGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQT 364
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++L+ AY + + E A + ++P + + Y KG+ +K + K
Sbjct: 365 YSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMK 424
Query: 317 GSVRKWVPDHRLITAAYN-KLEEQGDIDGAEHLLVT----LRNAGHVSTEIYNSLLRTYA 371
+ + PD YN ++ G + +H + T L T +N+L+ +
Sbjct: 425 SNGVQ--PDRHF----YNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHC 478
Query: 372 KAGK 375
K+G+
Sbjct: 479 KSGR 482
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 4/286 (1%)
Query: 42 MRGPDTCSALLHSYVQNKKSAE-AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
M G + +A+L + ++ K+S + AE + ++M E G YN ++ + + G L+
Sbjct: 164 MPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGL 223
Query: 101 QMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
E+++N P+VVTYN + A A K + ++P+ ISY+ + +
Sbjct: 224 FFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+ ++ + L+EM KR +RV +++L++ Y N+G + L + +M+ N
Sbjct: 284 CREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +I+S+ K G +A D+ + R L+ + + L+ A
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+V G P T+ L G+ G+ME ++ I R ++PD
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE--RGFIPD 447
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 137/307 (44%), Gaps = 4/307 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWL 121
E ++E+MS+ ++ + +N ++N Y + G + + E+ KN SP+VVTY +
Sbjct: 291 ETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLI 350
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + A + +++ + P+ +Y+TL + + ++A +KEM +
Sbjct: 351 NSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
+ Y++L++ + +G ++ + ++M+ + Y+ +IS + E EKA +
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
E + + D + L+ + +L + +++ G+ P T+ L Y
Sbjct: 471 KVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCI 530
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+G ++K L + I + + PD N +Q A+ LL+ L V E
Sbjct: 531 EGDLDKALRLHDEMIQ--KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Query: 362 I-YNSLL 367
I YN+L+
Sbjct: 589 ITYNTLI 595
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 149/332 (44%), Gaps = 24/332 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++S + A +++M + G Y +++ + G L + Q+++E+
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N +P ++TYN + E A E+ + PD +SYST+ S + + +
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA EM + + YSSL+ EV ++++M+SL ++ YT +
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I++ G+ +KA ++DE + D N+L+ + +++ + A+ +L+ +
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L +E FK A+ ++ + +G ++ A
Sbjct: 585 VPNEITYNTLID---NCNNLE-----FKSALALMKGFCM--------------KGLMNEA 622
Query: 346 EHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKM 376
+ +L ++ G+ ++ E+YN ++ ++K G +
Sbjct: 623 DRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 144/336 (42%), Gaps = 24/336 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM-LQE 105
T +AL++ + + +A L+++M E GF+ + Y+ +++ + N +L+K Q+ ++
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K SPDV TY+ + Q F E+ + PD ++Y++L + Y
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA EM ++ + V Y+ L++ + E R+ K++ + N+ Y +
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + L EF+ A L+ + + + A+ ++ KG
Sbjct: 595 IDNCNNL-EFKSAL-------------------ALMKGFCMKGLMNEADRVLESMLQKGY 634
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG-DIDG 344
K + ++ G+ K G +EK +K+ + S + P I A L +G +++
Sbjct: 635 KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS--GFAPHSVTIMALAKSLYHEGKEVEL 692
Query: 345 AEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLII 380
+ L TL++ + L+ +K G M +
Sbjct: 693 NQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVF 728
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 47 TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYI----SNGQLDKVPQ 101
T + LL +K++++A + ++ +M+E G + YN++LN S L+ +
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHM 183
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M + + PDVV+Y + + D + A + E+ I PD ++YS++ + K
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 243
Query: 162 MELPEKAATTLKE------------MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ +K + KE M + + + + YS+L+ Y G DE +++
Sbjct: 244 GQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 303
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S+ K N Y+ +I+ K+ E A ++ E ES + D NI+L +
Sbjct: 304 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 363
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
A+ Y R+ G + +T+ ++ G K + L+ F+
Sbjct: 364 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 407
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 124/314 (39%), Gaps = 53/314 (16%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQMLQE-L 106
LL+ +S EA L+ M++ P + Y ++N + G DK E L
Sbjct: 164 LLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 107 KKNTSPDVVTYNLWLAA-CASQN-DKE----------TAEKAFLELKKTKIDPDWISYST 154
+ PDVVTY+ +AA C Q DK +EK F + + + PD I+YST
Sbjct: 224 DRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 283
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L Y ++A L M + N V YS+L++ Y + ++ L ++K+M S
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 343
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG---------------------- 252
+ Y ++ L + A+ +Y SGT
Sbjct: 344 VSPDIITYNIILQGLFQTRRTAAAKELYVRITE-SGTQIELSTYNIILHGLCKNKLTDDA 402
Query: 253 --------------DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ R NI++ A + + + A+ + + G+ P Y T+ L+
Sbjct: 403 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 462
Query: 299 YLKKGQMEKVLECF 312
+ +G +E++ + F
Sbjct: 463 IIGQGLLEELDQLF 476
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 93/226 (41%), Gaps = 3/226 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L+ Y K EA L+ M G + Y+ ++N Y +++ +
Sbjct: 276 PDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 335
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E++ + SPD++TYN+ L A++ ++ + ++ + +Y+ + K
Sbjct: 336 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 395
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+L + A + + + ++ ++ +G DE ++ S N
Sbjct: 396 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 455
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
Y + +++ G E+ + ++ E T D + N ++ + R
Sbjct: 456 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 501
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 10/299 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ Y QL+K + + L+ P TY L L A + AE E++
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P+ Y+ +K EKA + M++ CR N ++ ++++Y
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 297
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++++ +M S+ K N YT ++++ + G EKAE +++E + D N L+
Sbjct: 298 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 357
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGS 318
AY + A ++ + G +P ++ +L Y + G E V E K+
Sbjct: 358 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR--G 415
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+ + H L+ AA+ + G+ E ++ L +G T N++L YA+AG++
Sbjct: 416 MSPTMKSHMLLLAAHAR---SGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 471
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 122/330 (36%), Gaps = 38/330 (11%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y AE ++ +M E G YN L+ + +K ++ Q
Sbjct: 211 DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 270
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K+ + T+ L + ++ K F E+K P+ +Y+ L + + + L
Sbjct: 271 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 330
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +EM++ + AY++L+ Y+ G I+ M + + + A Y
Sbjct: 331 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNI 390
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E AE +++E L +G
Sbjct: 391 LVDAYGRAGLHEDAEAVFEE-----------------------------------LKQRG 415
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P + LL + + G + E + S PD + A N G +D
Sbjct: 416 MSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS--GLTPDTFALNAMLNAYARAGRLDD 473
Query: 345 AEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
E L + G YN + Y +AG
Sbjct: 474 MERLFAAMERRGDADVGTYNVAVNAYGRAG 503
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 2/181 (1%)
Query: 32 ENFFENLPDKMRGPDTCSA--LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE L + P S LL ++ ++ + E +M ++ + G N MLN
Sbjct: 405 EAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNA 464
Query: 90 YISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
Y G+LD + ++ +++ DV TYN+ + A E AF + + D
Sbjct: 465 YARAGRLDDMERLFAAMERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADV 524
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++++ Y + + + ++EM C + LL+ ++ ++V I +
Sbjct: 525 VTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRS 584
Query: 210 M 210
M
Sbjct: 585 M 585
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 155/389 (39%), Gaps = 67/389 (17%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN--------------- 93
++L+H+Y +++ + A L +KM +CG L YN + SN
Sbjct: 346 NSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKA 405
Query: 94 --------------------------GQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACAS 126
G+ DK +++ E+ K PD TY+ +
Sbjct: 406 YSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLC- 464
Query: 127 QNDKETAEKAFL---ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
D EKAFL E+KK I P +Y+ L + K L ++A EM + C N
Sbjct: 465 --DASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPN 522
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y+SL+ Y + ++++ M+ +K N YT +I K G+ +KA IY
Sbjct: 523 VVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYA 582
Query: 244 EWES-ISGT----------GDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ I + D PNI L+ N++E A + + G +P
Sbjct: 583 RMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEP 642
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
++ L G+ K G++E E F K S R + P+ ++ N L ++ +D
Sbjct: 643 NQIVYDALIDGFCKTGKLENAQEVFVKM--SERGYCPNLYTYSSLINSLFKEKRLDLVLK 700
Query: 348 LLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
+L L N+ + IY ++ K GK
Sbjct: 701 VLSKMLENSCTPNVVIYTDMIDGLCKVGK 729
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 163/405 (40%), Gaps = 54/405 (13%)
Query: 25 ALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
L +AR F E L D P+ T ++L+H+Y++ +K +A L E M G +
Sbjct: 502 GLIQQARNWFDEMLRDNCT-PNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVT 560
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-----------------SPDVVTYNLWLAACA 125
Y +++ + GQ+DK Q+ ++ + +P+++TY +
Sbjct: 561 YTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLC 620
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
N E A + + +P+ I Y L + K E A +M +R N
Sbjct: 621 KANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLY 680
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
YSSL++ D VL++ KM+ N YT +I L K+G+ E+A + +
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
E + + ++ + ++E Y + +KG P + T+ +L G +
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLL 800
Query: 306 E----------------------KVLECFKK----AIG-----SVRKWVPDHRLITAAYN 334
+ K++E F + +IG S + VP L +
Sbjct: 801 DEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILID 860
Query: 335 KLEEQGDIDGAEHLLVTLRNAGHVSTE---IYNSLLRTYAKAGKM 376
+ G ++GA +LL + ++ ++ +Y SL+ + + A K+
Sbjct: 861 NFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKV 905
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 133/349 (38%), Gaps = 26/349 (7%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN------TSPDVVTYNLWL 121
+ ++ + G+ P YN ++ +++ +LD + +E+ + + Y+L
Sbjct: 193 LGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCK 252
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
A A L+K + PD + Y+ + S + L ++A L M +C
Sbjct: 253 AG--------RCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI 304
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N V Y LLS G RI MM+ N + ++ + K ++ A +
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQ------LEMAESFYNRLVTKGIKPCYTTWELL 295
+ + + NI + + + + LE+AE Y+ ++ G+
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
G+ +K E + + + +VPD + L + ++ A L ++
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMS--KGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKN 482
Query: 356 GHV-STEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITS 403
G V S Y L+ ++ KAG LI R D + D T V+ TS
Sbjct: 483 GIVPSVYTYTILIDSFCKAG---LIQQARNWFDEMLRDNCTPNVVTYTS 528
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 128/341 (37%), Gaps = 14/341 (4%)
Query: 75 GFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELKKNTSPDVV--TYNLWLAACASQNDKE 131
G+ P+ YN ++ L N D+V ++ +++ N + C
Sbjct: 128 GYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWN 187
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A + LK +Y+ L ++++ + + A +EM R +
Sbjct: 188 VALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFA 247
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
G + L + +K F + Y ++S L + F++A +I D SIS
Sbjct: 248 YSLCKAGRCGDALSLLEK--EEFVP-DTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI 304
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
+ ILL+ + + QL + + ++T+G P + L Y K +
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364
Query: 312 FKKAI--GSVRKWVPDHRLITAAYNKLEEQGD--IDGAEHLLVTLRNAGHVSTEI-YNSL 366
FKK I G ++ + I + + E G ++ AE + + G V ++ ++
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424
Query: 367 LRTYAKAGKMPL---IIVERMQKDNVQMDAETQKVLKITSE 404
R AGK II E M K V D+ KV+ +
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCD 465
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 8/297 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
++++Y + + EAE L +M E G + YN +++ Y Q + V +L E+
Sbjct: 395 IVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYSRRLQPEVVESLLLEMHDLG 454
Query: 110 TSPDVVTYNLWLAACASQND-KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P+ +YN ++A Q E AE AFL +K I P SY++L Y EKA
Sbjct: 455 LQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSSSYTSLLCAYAVNGQYEKA 514
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
T +M+K + + Y++LL ++ G D+++ W+ M++ + V+
Sbjct: 515 HITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMINEKVGGTRVTFHMVLDG 574
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L K G + +A ++ E+ +I NIL+ Y Q + +KP
Sbjct: 575 LAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYKLPQLLKEMSALELKPD 634
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ + + Y + K K+ + S + VPD + +Y KL D+ A
Sbjct: 635 SVTYSTMIYAYARVRDFSKAFYYHKQMVRSGQ--VPDAK----SYKKLLNTLDVKSA 685
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 160/417 (38%), Gaps = 103/417 (24%)
Query: 63 EAEALMEKMSECGF-LKC-------------PLPYNHMLNLYISNG--QLDKVPQMLQEL 106
E LM++M E G L+C P P ++ L + D+V ++L L
Sbjct: 215 ECVELMKRMGEEGLPLRCLDLFRWMRVLEEQPTPQAWLVALVVLGRARMADEVLEILGRL 274
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + V YN ++ A + A F ++K + PD I+ S + ++ K ++
Sbjct: 275 PHERQFREAVLYNAAMSGVAYCGRYDDAWTIFEFMEKNSVQPDHITSSIMLNVMKKQKVS 334
Query: 166 EKAA-TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
KAA + M ++ + + +SL+ ++ + G K E L I +M N + Y
Sbjct: 335 AKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQSEMERRGIPSNTSIYNE 394
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF-------- 276
++++ K + E+AE ++ E + NIL+ AY R Q E+ ES
Sbjct: 395 IVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYSRRLQPEVVESLLLEMHDLG 454
Query: 277 -------YNRLVT---------------------KGIKPCYTTWELLTWGYLKKGQMEK- 307
YN L++ GIKP +++ L Y GQ EK
Sbjct: 455 LQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSSSYTSLLCAYAVNGQYEKA 514
Query: 308 ---------------------VLECFKKA-----------------IGSVRKWVPDHRLI 329
+L+ F++A +G R V H ++
Sbjct: 515 HITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMINEKVGGTR--VTFHMVL 572
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG---KMPLIIVE 382
+ L + G A ++ N G T + YN L+ TYAK G K+P ++ E
Sbjct: 573 ----DGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYKLPQLLKE 625
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 48/372 (12%)
Query: 47 TCSALLHSYVQNK-KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + ++H Y++ K K A L+E M E G + YN ++N +++G+L+ ++L +
Sbjct: 19 TYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ S ++VTY + A+ + K F E+K P+ +Y+ L Y + L
Sbjct: 79 MKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGL 138
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A EM+ C K+ Y+ +++Y G +++ R+ +M + + Y
Sbjct: 139 FKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNT 198
Query: 225 VISSLVKLGEFEKAENIYDE--------------------------------WESISGTG 252
++ K F KA I E +E++ G
Sbjct: 199 LLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKG 258
Query: 253 DPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
VPNI +L+ Y A ++ ++ G PC + L Y G ++
Sbjct: 259 --VVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQE 316
Query: 308 VLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
L CF+ +RK VPD ++ TA + + G AE L + G V I Y
Sbjct: 317 ALACFQ----DMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYG 372
Query: 365 SLLRTYAKAGKM 376
L+R +A AG++
Sbjct: 373 ILVRAFANAGRL 384
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 26 LQTRARENFFEN---LPDKMRGPDTCSALLHSY-----VQNKKS--AEAEALMEKMSECG 75
+Q R+ F+ L D+M G C+ +H+Y + K+ + E L+++M G
Sbjct: 130 IQGYGRKGLFKEALELYDEMDGVG-CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAE 134
+ YN +L++Y K ++L+E+ + P++ TYN+ L++ + A
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ F LK + P+ ++YS + SLY + L +AA EM + C +AYS L+ Y
Sbjct: 249 QLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESY 308
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+ G E L ++ M + YT ++ + K G +AE +Y E D
Sbjct: 309 GHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDG 368
Query: 255 RVPNILLAAYINRNQL 270
IL+ A+ N +L
Sbjct: 369 ITYGILVRAFANAGRL 384
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 6/272 (2%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPDWISYSTLTSLYIKMEL 164
+K VVTY + + Q K LE +K++ PD I Y+ L + +
Sbjct: 9 MKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGR 68
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E A L +M++ N V Y++L+ Y N G + +++++M N Y
Sbjct: 69 LEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNA 128
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I + G F++A +YDE + + D NI +A Y R LE E + + TKG
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQGDID 343
+ P T+ L Y KK K E ++ R + + ++ ++ K EQ +
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK--EQ-SVA 245
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
A L L++ G V + Y+++L Y + G
Sbjct: 246 EATQLFENLKSKGVVPNIVTYSAMLSLYGRHG 277
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 6/270 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QEL 106
++LL+S + KK +A A+ M SE + + Y+ +++ + +L + ++ Q +
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
N P+V TYN +L + A+ + E+ PD I+YSTL + +
Sbjct: 185 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD 244
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + M R CR N V Y+ LL DE +++KM+ + YT ++
Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLL 304
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKG 284
+G+ E+A ++DE +S DP V N LL + + A + +V++
Sbjct: 305 YGFCNVGKIEQAVEVFDEM--VSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KP + ++ G K +++ +E F++
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFER 392
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
S L+ + + + AE L ++M + + YN LN + G++ + +E+
Sbjct: 161 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMIS 220
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
SPDV+TY+ + + + A + F + P+ ++Y+ L K P++
Sbjct: 221 AGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDE 280
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A ++M +R C ++V Y++LL + N+G ++ + ++ +M+S + Y C++
Sbjct: 281 AHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 340
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKGIK 286
+ G+ +A ++ S D NI++ +L+ A + R+ G
Sbjct: 341 GFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 400
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKK 314
P T+ L +G + ++ + ++ FK+
Sbjct: 401 PDLVTYNSLIFGLCGEQRLSEAMKVFKE 428
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 11/289 (3%)
Query: 94 GQLDKVPQMLQEL-KKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKID---PD 148
G++D +L+ + K+ PD+ T+++ + C + +E E FL+ I
Sbjct: 63 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE--FLQGMNRTISTRASS 120
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
SY++L + K + +A M +R+ + V+YS L+ + + +++
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
K+M+ L N Y ++ L++ G A+ +Y+E S + D + L+ +
Sbjct: 181 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLA 240
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+ + A + ++++G +P T+ L G K+ + ++ E F+K + R PD
Sbjct: 241 RKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE--RGCDPDKV 298
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
T G I+ A + + + GH + YN LL+ + +AGK
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 347
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 12/251 (4%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSEC 74
+ R+A AQ + +E + PD T S L+H + +K +A L E M
Sbjct: 205 KGRIADAQGV--------YEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETA 133
G + YN +L+ + D+ ++ +++ ++ PD VTY L + E A
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
+ F E+ DPD ++Y+ L + + P +A + M R C+ + V+++ ++
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG 376
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMND-AEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ D+ + ++++M D Y +I L +A ++ E + + +
Sbjct: 377 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436
Query: 253 DPRVPNILLAA 263
DP N+LL A
Sbjct: 437 DPHAFNVLLEA 447
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 149/355 (41%), Gaps = 21/355 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH--MLNLYISNGQLDKVPQMLQ 104
TC +++ + + A +L+E M + G+ CP H ++N ++ + + LQ
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGY--CPDMATHSMLINELCKADKIQEAQEFLQ 108
Query: 105 ELKKNTS---PDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDWISYSTLTSLYI 160
+ + S +YN L + A F + + + PD +SYS L +
Sbjct: 109 GMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFC 168
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K++ +A K+M C N Y++ L+ G + ++++M+S +
Sbjct: 169 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y+ +I + ++A +++ S + N LL ++ + A + ++
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE-- 338
V +G P T+ L +G+ G++E+ +E F + + + PD AYN L +
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVS--KGHDPD----VVAYNCLLKGF 342
Query: 339 --QGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDN 388
G A L V + T +N ++ +KA ++ + + ERM++D+
Sbjct: 343 FRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 397
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 3/274 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + + PD T + LL + +A + + M+E G + + Y +++ +
Sbjct: 174 NLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTF 233
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ QL +V ++L+E++ + PD+ YN + A A + A F ++++ PD
Sbjct: 234 AGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDV 293
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+YSTL +Y E+ + +M+ + Y+SL+ ++ GY E + ++
Sbjct: 294 ETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHD 353
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ K +DA Y+ ++S + G +A I+ + T L+++Y
Sbjct: 354 MVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAM 413
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ A Y R+ G+ P + ++ L GY K G
Sbjct: 414 YKDALVSYYRIREAGLDPQVSAYDALIQGYAKGG 447
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 127/322 (39%), Gaps = 20/322 (6%)
Query: 65 EALMEKMSECGFLKCP--------LPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVV 115
E L+EK SE F P + ++N Y NGQ + +L +KK P+++
Sbjct: 95 EGLLEKCSEI-FEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLI 153
Query: 116 TYNLWLAACASQN-DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
TYN L AC+ D E F +++ I PD I+Y+TL S L E+AA K
Sbjct: 154 TYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKT 213
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + + V Y SL+ + V + ++M + A Y +I + G
Sbjct: 214 MNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGN 273
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
A ++ + + D + LL Y N+ E S ++ + P T+
Sbjct: 274 VHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNS 333
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA----EHLLV 350
L + + G ++ + F + S K PD +A + G A +H+L
Sbjct: 334 LIQVFGEGGYFQESINLFHDMVDSGVK--PDDATYSALLSVCGRGGLTREAAKIHQHMLT 391
Query: 351 TLRNAGHVSTEIYNSLLRTYAK 372
N S E L+ +Y K
Sbjct: 392 ---NESTPSLEASAGLISSYGK 410
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 166/385 (43%), Gaps = 12/385 (3%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV +A E F PD++ T ++L++ + + +A +++ M E GF
Sbjct: 243 RVEEALRFVLEVSEEGFS--PDQV----TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDP 296
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 137
YN +++ G+ +K ++LQ++ + SP+ VTYN ++A +N+ E A
Sbjct: 297 DVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLA 356
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
L + PD +++TL + + A +EM+ + C+ + YS L+
Sbjct: 357 RILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE 416
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
E L + K+M S N Y +I L K E AE I+D+ E + +
Sbjct: 417 RRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTY 476
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L+ ++E A ++++ +G+KP T+ L + + G +EK + +
Sbjct: 477 NTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM-- 534
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYA--KAG 374
+ PD L G +D A LL +++ G V T YN +++ K
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594
Query: 375 KMPLIIVERMQKDNVQMDAETQKVL 399
K + + M + + DA T K++
Sbjct: 595 KEGMRLFREMMEKSDPPDALTHKIV 619
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 118/291 (40%), Gaps = 5/291 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD YN+ L A N + E ++ I D +++ L K A
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L+EM + + + +++L+ + G + L++ K+M+ + + +++ K
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G E+A E + D N L+ + + A + ++ KG P T
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L G K G+ EK +E ++ I +R+ P+ + L ++ +I+ A L
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMI--LRECSPNTVTYNTLISALCKENEIEAATDLARI 358
Query: 352 LRNAGHV-STEIYNSLLR--TYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L + G + +N+L++ +K + + + E M+ + D T +L
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 113/273 (41%), Gaps = 9/273 (3%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + +K PD T S L+ S ++ EA L+++M G + + YN +++
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +++ ++ +++ S VTYN + E A + ++ + PD +
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y++L + + ++ EKA ++ M C + Y +L+ G D ++ + +
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQ 570
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ-L 270
+ Y VI +L ++ ++ E S D I+ N +
Sbjct: 571 MKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPI 630
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ A F ++ KGI P E ++G+L +G
Sbjct: 631 QEAIDFTVEMLEKGILP-----EFPSFGFLAEG 658
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 156/354 (44%), Gaps = 6/354 (1%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
+L+ N +++ K E G + N ++ + + G +++V + + +K+N
Sbjct: 149 SLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKEN 208
Query: 110 -TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P + +YN + + E+AE+ F ++ KI PD ++Y+T+ Y ++ KA
Sbjct: 209 GIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKA 268
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
LK ME R +++ Y +L+ G D L ++ +M ++ Y+ VI
Sbjct: 269 FEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGG 328
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L K G+ + +++ S + + L+ + + A + R+ +G++P
Sbjct: 329 LCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPD 388
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ ++ K G++++ LE + G + + ++ + L + G +D AE +
Sbjct: 389 EVTYGVIVNSLCKSGRLDEALEYMEFCSG--KGVAVNAMFYSSLIDGLGKSGRVDEAERI 446
Query: 349 LVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ G + YN+L+ AK GK+ L + +RM+ D T +L
Sbjct: 447 FYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTIL 500
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 139/362 (38%), Gaps = 38/362 (10%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
L++ V +K AE + E M + YN M+ Y G+ K + L+ ++ +N
Sbjct: 220 LVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRN 279
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+PD +TY + AC ++ D ++ + E+ + ++ YS + K +
Sbjct: 280 VAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGY 339
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T + M + C+ N Y++L+ G E + ++K+M + ++ Y +++SL
Sbjct: 340 TVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSL 399
Query: 230 VKLG---------EF--------------------------EKAENIYDEWESISGTGDP 254
K G EF ++AE I+ E D
Sbjct: 400 CKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDS 459
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N L+ A +++ A + R+ G T+ +L G ++ + E+ L +
Sbjct: 460 YCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDL 519
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
I + P A L G + A +L + G + ++ ++ KAG
Sbjct: 520 MID--KGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMINILCKAG 577
Query: 375 KM 376
++
Sbjct: 578 RI 579
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 6/272 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S+L++ +Q++K +A AL+ KM E G + Y ++ + D ++ + +
Sbjct: 406 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 465
Query: 107 KKNT-SPDVVTYN-LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++N +PD YN L A C S AE+A+ L + + ++Y++L + K
Sbjct: 466 EQNGLTPDEQAYNVLTHALCKSGR----AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 521
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ AA +++M C+ + YS LL +E L I +M K N YT
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+IS ++K G+ + A+++++E S + +++Y Q+E AE + G
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ P T+ + G G M++ K+ I
Sbjct: 642 VAPDVVTYNVFINGCGHMGYMDRAFSTLKRMI 673
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 150/366 (40%), Gaps = 19/366 (5%)
Query: 46 DTCSALLHSY-------VQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
D CS LH+Y + + A ++E+M G + YN M++ Y +G++
Sbjct: 189 DGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 248
Query: 99 VPQMLQELKKN-TSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ +++N +PD TYN+ + C + D+ AE+ + P I+++ +
Sbjct: 249 ALGIKALMERNGCNPDDWTYNILIYGLCGEKPDE--AEELLNDAIVRGFTPTVITFTNII 306
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ Y K E + A M C+ + AY L+++ E +M +
Sbjct: 307 NGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLA 366
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N YT +I K+G+ A ++ E + + L+ I +L A +
Sbjct: 367 PNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMAL 426
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
++ GI P T+ L G KK + + F+ + PD + + L
Sbjct: 427 ITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE--MMEQNGLTPDEQAYNVLTHAL 484
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPL--IIVERMQKDNVQMDA 393
+ G + A LV G V T++ Y SL+ ++KAG +++E+M + + D+
Sbjct: 485 CKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADS 541
Query: 394 ETQKVL 399
T VL
Sbjct: 542 YTYSVL 547
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 108/276 (39%), Gaps = 18/276 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ ++ K A+++ +M G Y ++ Y GQ+++ ++ E+++
Sbjct: 580 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 639
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PDVVTYN+++ C + A + +P++ +Y L ++KM L +
Sbjct: 640 DGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDA 699
Query: 168 AATT----------------LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
L+ M K V YSS+++ + +E ++ M
Sbjct: 700 HYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMR 759
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
N+ YT +I + F KA + + + L+ + +
Sbjct: 760 GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYD 819
Query: 272 MAES-FYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
A+S F + L + W++L G LK G ++
Sbjct: 820 KAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVD 855
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 145/394 (36%), Gaps = 71/394 (18%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ + + + A L+EKM G Y+ +L +L++ +L ++
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++V Y + ++ + + A+ F E+ + P +Y+ S Y K+
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A + EME+ + V Y+ ++ +MGY D K+M+ + N Y
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTY--- 684
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L F K + + SG N +L+ R+V G+
Sbjct: 685 ---WILLKHFLKMSLVDAHYVDTSGMW-------------NWIELDTVWQLLERMVKHGL 728
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK------------------------KAIGSVRK 321
P T+ + G+ K ++E+ F K G
Sbjct: 729 NPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVS 788
Query: 322 WVPD-------------HRLITAAYNKLEEQGDIDGAEHLLVTL-----RNAGHVSTEIY 363
+V D H LI L ++GD D A+ L L N V+ +I
Sbjct: 789 FVTDMIEFGFQPHLESYHYLIVG----LCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKIL 844
Query: 364 NSLLRTYAKAGKMPLI--IVERMQKDNVQMDAET 395
N L KAG + ++ M+ + Q+D+ET
Sbjct: 845 NDGL---LKAGHVDFCSQLLSAMENRHCQIDSET 875
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 132/331 (39%), Gaps = 9/331 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
L++ ++ + EA+ + +M G + Y +++ Y G++ ++ + ++
Sbjct: 338 GVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEH 397
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ TY+ + A ++++ I P I+Y+TL K +
Sbjct: 398 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 457
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + ME+ + AY+ L G +E + + K+ YT ++
Sbjct: 458 AFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVT---YTSLVD 514
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G + A + ++ + D ++LL A + +L A S +++ G+K
Sbjct: 515 GFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKC 574
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ ++ +K+G+ + F + I S K P T + + G I+ AEH
Sbjct: 575 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK--PSATTYTVFISSYCKIGQIEEAEH 632
Query: 348 LLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
L+ + G V+ ++ YN + G M
Sbjct: 633 LIGEMERDG-VAPDVVTYNVFINGCGHMGYM 662
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 123/266 (46%), Gaps = 1/266 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + +AEA+ +M + GF + YN ++ + G K ++ +
Sbjct: 134 DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFER 193
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ P TY + + + A K F E++ K P+ +++ L + + + L
Sbjct: 194 MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 253
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +++++ + AY++L+ Y+ G+ I+ M + + + A Y
Sbjct: 254 CEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 313
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E A+ +++ + + T + +LL+AY ++ E N++ G
Sbjct: 314 MVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 373
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
IKP + Y + GQ EK+ E
Sbjct: 374 IKPDTFVLNSMLNLYGRLGQFEKMEE 399
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 9/302 (2%)
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
L+ L+ P TY L L A + E AE F E++K P + Y+ +K
Sbjct: 122 LELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKG 181
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+KA + M++ C+ + Y+ L++LY L+++ +M S K N +
Sbjct: 182 GDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTF 241
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T ++++ + G EKAE I+++ + D N L+ AY A ++ +
Sbjct: 242 TALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQH 301
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQG 340
G +P ++ ++ Y + G E F+ K +G + + H L+ +AY++ G
Sbjct: 302 MGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG-ITPTMKSHMLLLSAYSR---AG 357
Query: 341 DIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQK 397
+ E ++ + +G T + NS+L Y + G+ + ++ M+K D T
Sbjct: 358 KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYN 417
Query: 398 VL 399
+L
Sbjct: 418 IL 419
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 136/352 (38%), Gaps = 36/352 (10%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
++H+Y + AEA+M M E G YN +++ Y+ +DK + + LK T
Sbjct: 303 IIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKART 362
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+T + P +SY L +LY K+ +KA
Sbjct: 363 -------------------------------ETGLSPTVVSYGCLINLYSKLGKMDKALQ 391
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
EME + + NR YS ++ Y +G +++ M + K + Y ++++
Sbjct: 392 ISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFC 451
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G+ +A + ES R I++ ++ L MA + G +P
Sbjct: 452 KNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAA 511
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T+ ++ G + GQM++ + + V P+ R T GD+ A
Sbjct: 512 TYNVIMHGLAQAGQMDRAASIIDEMV--VAGVHPNERSYTTLIEGYACIGDMGLAFKYFN 569
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
++ G I Y SLL+ KAG+M L I M V M+ +L
Sbjct: 570 RIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNIL 621
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 17/324 (5%)
Query: 101 QMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+++ K+ P + L + + DK +A AF ++ I+P+ SY+ L Y
Sbjct: 179 KVVDAFKRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYA 238
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ A ++EME N YS ++S Y +G + R +++ +S ND
Sbjct: 239 VAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDV 298
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +I + K G E+AE I E + N+L+ Y++ ++ + + RL
Sbjct: 299 IYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRL 358
Query: 281 VTK---GIKPCYTTWELLTWGYLKKGQMEKVL----ECFKKAIGSVRKWVPDHRLITAAY 333
+ G+ P ++ L Y K G+M+K L E + I RK + +I Y
Sbjct: 359 KARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRK---TYSMIIDGY 415
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
+L GD A + + NAG I YN L+ + K G+M L ++ RM+ +
Sbjct: 416 VQL---GDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCP 472
Query: 391 MDAETQKVLKITSEMPVSEVSSIF 414
T ++ I M + ++ F
Sbjct: 473 PTLRTYTII-IDGFMKIGDLRMAF 495
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/379 (17%), Positives = 144/379 (37%), Gaps = 26/379 (6%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L++ Y + K +A + +M + G Y+ +++ Y+ G + +++
Sbjct: 376 LINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAG 435
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD +TYN+ + A A + ++ P +Y+ + ++K+ A
Sbjct: 436 IKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAF 495
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T+++M+ R + Y+ ++ G D I +M+ N+ YT +I
Sbjct: 496 ETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGY 555
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+G+ A ++ + + D LL A +++ + + G+
Sbjct: 556 ACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNN 615
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ +L G+ ++G M + + +K PD T+ N + GD+ A +
Sbjct: 616 YIYNILLDGWAQRGDMWEASDIMQKM--RHEGLTPDIHSYTSFINACCKAGDMLKATETI 673
Query: 350 VTLRNAG-HVSTEIYNSLLRTYA----------------KAGKMP------LIIVERMQK 386
++ G + + Y +L+ +A AG +P I+ + +
Sbjct: 674 EQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSR 733
Query: 387 DNVQMDAETQKVLKITSEM 405
V + VL++TSEM
Sbjct: 734 AAVARETVFDGVLRVTSEM 752
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 117/245 (47%), Gaps = 3/245 (1%)
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
AE F E++ + P +Y+ L Y+K L + A + EME+ N YS L+
Sbjct: 324 AEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLID 383
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
Y N G + + K+M + + N ++ ++SS GE++K+ + E E+
Sbjct: 384 AYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRP 443
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N+++ + N L+ A + ++R++++GI+P TW L + + G+ ++ E F
Sbjct: 444 DRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELF 503
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
++ + + P + N +Q D ++LL +R+ G V + Y +L+ Y
Sbjct: 504 EEMMEG--GYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYG 561
Query: 372 KAGKM 376
K+G+
Sbjct: 562 KSGRF 566
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + L+ + + K AE L E+M E G+ C +N M+N + + D V +
Sbjct: 478 PDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNL 537
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L ++ + P+ VTY + A + ++K + P Y+ L + Y +
Sbjct: 538 LAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQ 597
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
L E+A + + M + + +A +SL++ + E + + M K +
Sbjct: 598 RGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVT 657
Query: 222 YTCVISSLVKLGEFEKAENIYDE 244
YT ++ +L+++ +F+K ++Y+E
Sbjct: 658 YTTLMKALIRVEKFDKVPSVYEE 680
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 153/380 (40%), Gaps = 45/380 (11%)
Query: 27 QTRARENFFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
+T E FE + D P T +ALL YV+ +AE ++ +M G
Sbjct: 320 RTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSG--------- 370
Query: 85 HMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
SP+ TY+ + A + E+A E++ +
Sbjct: 371 -------------------------VSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASN 405
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ P+ +S + S Y +K+ L+EME R +RV Y+ ++ + D +
Sbjct: 406 VQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAM 465
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP--RVPNILLA 262
+ +M+S + + + +I + G+ ++AE +++E + G P NI++
Sbjct: 466 ATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEM--MEGGYSPCNTTFNIMIN 523
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
++ ++ + + ++ + ++G+ P T+ L Y K G+ +EC + K
Sbjct: 524 SFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLK- 582
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYA--KAGKMPLI 379
P + A N ++G + A +R G S NSL+ + +
Sbjct: 583 -PSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFT 641
Query: 380 IVERMQKDNVQMDAETQKVL 399
+++ M++++++ D T L
Sbjct: 642 VLQYMKENDLKPDVVTYTTL 661
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 128/312 (41%), Gaps = 10/312 (3%)
Query: 94 GQLDKVPQ-MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ +K+ + L ++N +P +TYN ++ACA ND E A +++ D+++Y
Sbjct: 179 GQSEKLYEAFLLSQRQNLTP--LTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNY 236
Query: 153 STLT-SLYIKMELPEKAATTL-KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
S + SL K + L +E+E + + ++ + G + L +
Sbjct: 237 SLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVV 296
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ A VI +L G +AE I++E R N LL Y+ L
Sbjct: 297 QGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLL 356
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ AE + + G+ P T+ L Y G+ E K+ S + P+ + +
Sbjct: 357 KDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQ--PNAYVFS 414
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
+ ++G+ + +L + N+G + YN ++ T+ K + + +RM +
Sbjct: 415 RILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSE 474
Query: 388 NVQMDAETQKVL 399
++ D T L
Sbjct: 475 GIEPDTVTWNTL 486
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 153/382 (40%), Gaps = 40/382 (10%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F+N + PD T S L++ + + + +A L+++M + G + YN ++
Sbjct: 153 DLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGL 212
Query: 91 ISNGQLDKVPQMLQELKKNTSPDVVTYNLWL---------------------AACASQ-- 127
NG++D +++++N +P V+TY + + A CA
Sbjct: 213 CDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVV 272
Query: 128 ------------NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
+ + A F ++ + PD +Y+ L Y K E P+ A L+EM
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 332
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
K C N + Y++L+ G + + + M+ K + + +I K+G+
Sbjct: 333 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 392
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ A ++ D NI+++ N+++ A R+ G P T+ +
Sbjct: 393 DLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 452
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RN 354
G K Q+++ E ++ + + D + + L + +D AE LL + RN
Sbjct: 453 VSGLCKASQVDEAYEVYE--VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERN 510
Query: 355 AGHVSTEIYNSLLRTYAKAGKM 376
Y L+ + KA ++
Sbjct: 511 GSAPDVVAYTILIHGFCKADQL 532
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 152/368 (41%), Gaps = 8/368 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + + PD T + L+ Y + ++ + L+++M + G + YN +++ +
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352
Query: 92 SNGQ-LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G+ +D L+++ P T+NL + + A + F + PD
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 412
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + S + + A L+ M + C + V Y+S++S DE +++ +
Sbjct: 413 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 472
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ ++ + +I L K + AE + E E D IL+ + +QL
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 532
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ + +F++ ++ KG P T+ ++ K ++ K + R PD + T
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE--RGVTPDAIVYT 590
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
+ + L + D A L ++ G T + YN L+ K ++ + ++E M+ D
Sbjct: 591 SVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESD 650
Query: 388 NVQMDAET 395
D T
Sbjct: 651 GCLPDTVT 658
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 7/242 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
TCS L+ ++++ +AE L+ +M G + Y +++ + QLDK E
Sbjct: 483 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542
Query: 106 LKKNTSPDVVTYNLW---LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
L K P V+TY++ L A D K LE T PD I Y+++ K
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT---PDAIVYTSVIDGLCKS 599
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ ++A K M++ C V Y+ L+ + DE + + + M S + Y
Sbjct: 600 DSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
V K E +KA ++ +S + P + ++LL + +++ A + +
Sbjct: 660 NSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALE 719
Query: 283 KG 284
G
Sbjct: 720 AG 721
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/275 (18%), Positives = 116/275 (42%), Gaps = 3/275 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++++ + + EA + E + G+ + + +++ + +LD ++
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 503
Query: 103 LQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+E+++N S PDVV Y + + + + + F E+ P I+YS + K
Sbjct: 504 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
LK M +R + + Y+S++ DE ++K M
Sbjct: 564 SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y ++ L K+ ++A ++ + ES D N + + + + A + +
Sbjct: 624 YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK 683
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++G P + LL + + +M++ +E +++A+
Sbjct: 684 SRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEAL 718
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 124/318 (38%), Gaps = 41/318 (12%)
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
T N L+A + + A F + PD I+YSTL + + K ++A L EM
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-----------------MSLFAKMN 218
EKR + Y++++ + G D L ++ M + A+++
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARIS 253
Query: 219 DAE-----------------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
DA Y +I+ KLG ++A ++++ S + D NIL+
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
Y + + + +V G +P + T+ L +K G K ++ F A +R+
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG---KYIDAFNLAQMMLRR 370
Query: 322 WV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI 379
P H + + G +D A L + + G + YN ++ +A ++
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 430
Query: 380 --IVERMQKDNVQMDAET 395
++ERM + D T
Sbjct: 431 RQLLERMTEAGCPPDVVT 448
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 41 KMRGPD----TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
+ RG D T SAL++ ++ + A+ + ++M E G + YN ++++Y+ Q
Sbjct: 303 RSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQW 362
Query: 97 DKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
++ ++L L+K +V TYN ++AC E A K + ++ + P +Y+ L
Sbjct: 363 EEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTAL 422
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
S Y K EKA ++M +R C +N + YSSL+S G + L ++ KM
Sbjct: 423 ISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENC 482
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
K N + +I++ G +EKA ++++ ++ D L+ AY Q A
Sbjct: 483 KPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALK 542
Query: 276 FYNRLVTKGIKP 287
+ ++ T+G P
Sbjct: 543 AFEQMQTQGCHP 554
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 134/296 (45%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y M++ S+ QL + +++ E++ + +V TY+ + C N+ + A+ + ++
Sbjct: 279 YTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQML 338
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P+ ++Y+ L +Y+K E+A L +EK+ + Y++++S G +
Sbjct: 339 EEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPE 398
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L++++KM++ K + YT +IS+ K G+ EKA I+ + + + L+
Sbjct: 399 QALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLI 458
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+A + EMA ++++ + KP T+ L G EK E F++ +
Sbjct: 459 SACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQM--QTQG 516
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
PD E G A ++ G H ++NSL+ ++G +
Sbjct: 517 CKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVL 572
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y+T+ S + +A + EM R N YS+L+++ D ++
Sbjct: 275 DLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY 334
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
K+M+ N Y +I VK ++E+A + D E + + R N +++A
Sbjct: 335 KQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKS 394
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPD 325
Q E A Y +++ G+KP TT+ L Y KKGQ+EK LE F+ I G R +
Sbjct: 395 GQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITY 454
Query: 326 HRLITA 331
LI+A
Sbjct: 455 SSLISA 460
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 3/265 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +L+ + + EA L +KM E G + + YN +++ Y + G L++
Sbjct: 295 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 354
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+ KK P V TYNL + A + A+ E++K I PD I+Y+ L + Y +
Sbjct: 355 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+KA EM + V Y+SL+ + + E +++K++ +
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ G E+A + E + S D N L+ ++E A + +
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 534
Query: 282 TKGIKPCYTTWELLTWGYLKKGQME 306
+GIKP + ++ L GY ++G ++
Sbjct: 535 RRGIKPDHISYNTLISGYGRRGDIK 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 166/358 (46%), Gaps = 20/358 (5%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+TC+ +L +++ + A L +M +N M+N+ G+L K + +
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 252
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ P+VV+YN + +S+ + E A + ++ I+PD +Y +L S K
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG-------YKDEVLRIWKKMMSLFAKM 217
E+A+ +M + N V Y++L+ Y N G Y+DE+++ K +M
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK--KGIMP----- 365
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ + Y ++ +L G +A+++ E D NIL+ Y + A +
Sbjct: 366 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLH 425
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
N +++KGI+P + T+ L + ++ +M++ + F+K + + PD + A +
Sbjct: 426 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD--QGVSPDVIMFNAMVDGHC 483
Query: 338 EQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
G+++ A LL + E+ +N+L++ + GK+ ++++ M++ ++ D
Sbjct: 484 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+H+ + EA+ ++++M + G + + YN ++N Y G K + E
Sbjct: 369 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P VTY + + +N + A+ F ++ + PD I ++ + +
Sbjct: 429 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 488
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A LKEM++++ + V +++L+ G +E + +M K + Y +
Sbjct: 489 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 548
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS + G+ + A + DE SI N L+ + ++AE +V KGI
Sbjct: 549 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 608
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
P +T+ L G G ++ ++E
Sbjct: 609 SPDDSTYLSLIEGM---GNVDTLVE 630
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 11/275 (4%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+K P + T N L+ N E A + E+ + +I +++ + ++ K +
Sbjct: 185 EKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLK 244
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA + ME + N V+Y++++ Y++ G + RI M + + Y +I
Sbjct: 245 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI 304
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S + K G E+A ++D+ I + N L+ Y N+ LE A S+ + +V KGI
Sbjct: 305 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 364
Query: 287 PCYTTWELLTWGYLKKGQM----EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
P +T+ LL +G+M + + E KK I +PD N G+
Sbjct: 365 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI------IPDAITYNILINGYSRCGNA 418
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A L + + G T + Y SL+ ++ +M
Sbjct: 419 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 105/265 (39%), Gaps = 11/265 (4%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+ ++L + C + A K F +K+ I P + + + SL++K+ E A E
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + ++ ++++ G + M L K N Y +I G
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
E A I D D L++ +LE A ++++V G+ P T+
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337
Query: 295 LTWGYLKKGQMEKVL----ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
L GY KG +E+ E KK I V + L+ A L +G + A+ ++
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGI---MPSVSTYNLLVHA---LFMEGRMGEADDMIK 391
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAG 374
+R G + I YN L+ Y++ G
Sbjct: 392 EMRKKGIIPDAITYNILINGYSRCG 416
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +L+ + + EA L +KM E G + + YN +++ Y + G L++
Sbjct: 317 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+ KK P V TYNL + A + A+ E++K I PD I+Y+ L + Y +
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+KA EM + V Y+SL+ + + E +++K++ +
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ G E+A + E + S D N L+ ++E A + +
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 556
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+GIKP + ++ L GY ++G ++
Sbjct: 557 RRGIKPDHISYNTLISGYGRRGDIKDAF 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 166/358 (46%), Gaps = 20/358 (5%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+TC+ +L +++ + A L +M +N M+N+ G+L K + +
Sbjct: 215 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 274
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ P+VV+YN + +S+ + E A + ++ I+PD +Y +L S K
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG-------YKDEVLRIWKKMMSLFAKM 217
E+A+ +M + N V Y++L+ Y N G Y+DE+++ K +M
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK--KGIMP----- 387
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ + Y ++ +L G +A+++ E D NIL+ Y + A +
Sbjct: 388 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLH 447
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
N +++KGI+P + T+ L + ++ +M++ + F+K + + PD + A +
Sbjct: 448 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD--QGVSPDVIMFNAMVDGHC 505
Query: 338 EQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
G+++ A LL + E+ +N+L++ + GK+ ++++ M++ ++ D
Sbjct: 506 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 563
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+H+ + EA+ ++++M + G + + YN ++N Y G K + E
Sbjct: 391 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P VTY + + +N + A+ F ++ + PD I ++ + +
Sbjct: 451 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 510
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A LKEM++++ + V +++L+ G +E + +M K + Y +
Sbjct: 511 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS + G+ + A + DE SI N L+ + ++AE +V KGI
Sbjct: 571 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 630
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
P +T+ L G G ++ ++E
Sbjct: 631 SPDDSTYLSLIEGM---GNVDTLVE 652
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 11/275 (4%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+K P + T N L+ N E A + E+ + +I +++ + ++ K +
Sbjct: 207 EKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLK 266
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA + ME + N V+Y++++ Y++ G + RI M + + Y +I
Sbjct: 267 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI 326
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S + K G E+A ++D+ I + N L+ Y N+ LE A S+ + +V KGI
Sbjct: 327 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 386
Query: 287 PCYTTWELLTWGYLKKGQM----EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
P +T+ LL +G+M + + E KK I +PD N G+
Sbjct: 387 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI------IPDAITYNILINGYSRCGNA 440
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A L + + G T + Y SL+ ++ +M
Sbjct: 441 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 105/265 (39%), Gaps = 11/265 (4%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+ ++L + C + A K F +K+ I P + + + SL++K+ E A E
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M + ++ ++++ G + M L K N Y +I G
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
E A I D D L++ +LE A ++++V G+ P T+
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359
Query: 295 LTWGYLKKGQMEKVL----ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
L GY KG +E+ E KK I V + L+ A L +G + A+ ++
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGI---MPSVSTYNLLVHA---LFMEGRMGEADDMIK 413
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAG 374
+R G + I YN L+ Y++ G
Sbjct: 414 EMRKKGIIPDAITYNILINGYSRCG 438
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 147/333 (44%), Gaps = 13/333 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD--KVPQMLQEL 106
+AL++SY +N K + L+E+M + L YN ++N + G LD + + E+
Sbjct: 182 TALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVIN-SCARGGLDWEGLLGLFAEM 240
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + PD+VTYN L AC+++ + AE F + + + PD +Y+ L + K+
Sbjct: 241 RHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRL 300
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+K + LKEM +Y+ LL Y +G ++ +++ M N Y+ +
Sbjct: 301 DKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSIL 360
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ K G +++ ++ E + + D N L+ + + + ++ + + +
Sbjct: 361 LGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENV 420
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P T+E L + K G + + S + +P + T +E G
Sbjct: 421 EPNMETYEGLIFACGKGGLHDDAKKILLHM--SEKGMIPSSKAYTGV---IEAYGQAAMY 475
Query: 346 EHLLVTLRNAGHVST----EIYNSLLRTYAKAG 374
E LVTL + + E YN+L+ +A+ G
Sbjct: 476 EEALVTLNTMNEMGSKPTIETYNTLIYMFARGG 508
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 133/311 (42%), Gaps = 7/311 (2%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACA 125
+ E+M G + Y ++N Y NG+ + ++L+ +KK SP ++TYN + +CA
Sbjct: 165 IFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCA 224
Query: 126 SQN-DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
D E F E++ I PD ++Y+TL L ++A + M + +
Sbjct: 225 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDI 284
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
Y+ L+ + + D+V + K+M S + Y ++ + ++G E A ++
Sbjct: 285 TTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRL 344
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ + +ILL Y + + + + +P T+ L + + G
Sbjct: 345 MQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGY 404
Query: 305 MEKVLECFKK-AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEI 362
++V+ F A +V + + + A K G D A+ +L+ + G + S++
Sbjct: 405 FKEVVTLFHDMAEENVEPNMETYEGLIFACGK---GGLHDDAKKILLHMSEKGMIPSSKA 461
Query: 363 YNSLLRTYAKA 373
Y ++ Y +A
Sbjct: 462 YTGVIEAYGQA 472
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 105/280 (37%), Gaps = 39/280 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ LL +Y + +A + M E G + Y+ +L LY +G+ D+V ++ E+K
Sbjct: 323 NVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKV 382
Query: 108 KNTSPDVVTYNL-----------------------------------WLAACASQNDKET 132
NT PD TYN + AC +
Sbjct: 383 SNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDD 442
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A+K L + + + P +Y+ + Y + + E+A TL M + + Y++L+
Sbjct: 443 AKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIY 502
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
++ G E I KM + VI + G+FE+A Y E E
Sbjct: 503 MFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVP 562
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP---CY 289
D R +L+ Y ++ + + + GI P CY
Sbjct: 563 DERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCY 602
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 146/363 (40%), Gaps = 58/363 (15%)
Query: 57 QNKKSAEAEALMEKMSEC----GFLKCPLPYNHMLNL---------YISNGQLDKVPQML 103
+ K S + E L+ K+S +C + + L+L + G + ++
Sbjct: 71 KGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLF 130
Query: 104 QELKKNT--SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ +++ P+ Y + ++ + E F E+ + SY+ L + Y +
Sbjct: 131 KHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGR 190
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E + L+ M+K + + Y+++++ G W+ ++ LFA+M
Sbjct: 191 NGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLD------WEGLLGLFAEM---- 240
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ E I D N LL A NR + AE + +
Sbjct: 241 ---------------RHEGIQP---------DIVTYNTLLCACSNRGLGDEAEMVFRTMN 276
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--AIGSVRKWVPDHRLITAAYNKLEEQ 339
G+ P TT+ L + K +++KV E K+ + G+V + + + ++ AY ++
Sbjct: 277 EGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPE-ISSYNVLLEAYARI--- 332
Query: 340 GDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQ 396
G+I+ A + ++ AG V + E Y+ LL Y K G+ + + M+ N + DA T
Sbjct: 333 GNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATY 392
Query: 397 KVL 399
L
Sbjct: 393 NTL 395
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 102/246 (41%), Gaps = 12/246 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ +Y Q EA + M+E G YN ++ ++ G + +L ++
Sbjct: 463 TGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGD 522
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ + ++N + E A KA++E++K+++ PD + + S+Y L ++
Sbjct: 523 FGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDE 582
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ +E++ N + Y +L++Y +E + +M++ A + VI
Sbjct: 583 SVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRA----SNIHQVIG 638
Query: 228 SLVKLGEFEKAEN------IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++K G+F+ N ++D+ S R N LL A Q E A
Sbjct: 639 QMIK-GDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVLGEAT 697
Query: 282 TKGIKP 287
+G P
Sbjct: 698 KRGHFP 703
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 155/340 (45%), Gaps = 11/340 (3%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD ++L+ Y + A +++++M E + YN ++ + G+ D
Sbjct: 599 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC 658
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ ++ +PD +TYN + + E A E+K I P+ ++Y+ L K
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
EKA + L EM + + L+ Y+ D++L+I +K+++ +++ Y
Sbjct: 719 GAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVY 778
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I+ +LG KA+ + DE + D N L+ Y + +E A Y+++
Sbjct: 779 NTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFV 838
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV--RKWVPD---HRLITAAYNKLE 337
GI P TT+ L G G ME+++E +K + + R VP+ + ++ + Y ++
Sbjct: 839 DGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV- 897
Query: 338 EQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
G+ L + + G V T + YN L+ YAK+GKM
Sbjct: 898 --GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKM 935
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 17/365 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD TCS++L+ + ++ K EA L +M E G + Y ++N L+ S ++
Sbjct: 354 PDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNL 413
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q + + S D+VT + + AE+ F + K + P+ ++YS L Y K
Sbjct: 414 QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 473
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E A L++MEK N + +SS+++ Y G + + + ++M+ N
Sbjct: 474 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 533
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I K GE + A++ E +S + +ILL +++ A S +
Sbjct: 534 YAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMY 593
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ-- 339
+KGI P + L GY K+G L ++ + R AYN L +
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM------KEKNIRFDVVAYNALIKGLL 647
Query: 340 --GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAE 394
G D ++ + G I YN+++ TY GK L I+ M+ + +A
Sbjct: 648 RLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAV 706
Query: 395 TQKVL 399
T +L
Sbjct: 707 TYNIL 711
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 147/350 (42%), Gaps = 42/350 (12%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+N +L + +L + Q KN P +VTY +AA E + + ++
Sbjct: 290 FNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM 349
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I PD ++ S++ + + +AA +EM + N V+Y+++++ G E
Sbjct: 350 NGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 409
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ +M+ + T V+ L K+G+ ++AE +++ ++ + + LL
Sbjct: 410 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
Y ++E+AE ++ + + P T+ + GY KKG + K ++ ++ + R
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ--RNV 527
Query: 323 VPD---HRLITAAYNKLEEQ--------------------------------GDIDGAEH 347
+P+ + ++ Y K EQ G +D A
Sbjct: 528 MPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS 587
Query: 348 LLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDA 393
L++ + + G + +I Y SL+ Y K G L IV+ M++ N++ D
Sbjct: 588 LIIDMYSKG-IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV 636
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 116/306 (37%), Gaps = 75/306 (24%)
Query: 70 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQN 128
+M E G + YN ++N Y G+ + +L E+K P+ VTYN+ +
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719
Query: 129 DKETAEKAFLELKKTKIDPDWIS-----------------------------------YS 153
E AE A E+ + P I+ Y+
Sbjct: 720 AVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYN 779
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-- 211
TL +++ ++ + KA L EM KR + V Y++L+ Y + ++ L+ + +M
Sbjct: 780 TLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD 839
Query: 212 ------------------------------SLFAKMND-------AEYTCVISSLVKLGE 234
L ++MN+ A Y ++S ++G
Sbjct: 840 GIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGN 899
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
+K ++ E + + N+L++ Y ++ A N L+TKG P T+++
Sbjct: 900 RKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDI 959
Query: 295 LTWGYL 300
LT G+L
Sbjct: 960 LTCGWL 965
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 161/396 (40%), Gaps = 48/396 (12%)
Query: 26 LQTRARENFFENLPDKMRGPD--TCSALLHSYV-QNKKSAEAEALMEKMSECGFLKCPLP 82
L ++A E E K PD T S +++ + Q + E L E ++ G +
Sbjct: 24 LTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVT 83
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL- 140
Y +++ +G++D+ +M++E+K K PD T++ + + + A K + E+
Sbjct: 84 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 143
Query: 141 -KKTKID------------------------------------PDWISYSTLTSLYIKME 163
++D PD ++Y+ L + K
Sbjct: 144 TSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSG 203
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
EKA L ME R C N V YSSLL G D+ L ++++M S N YT
Sbjct: 204 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 263
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I L + + A + DE + D N LL Y ++E A+ + + K
Sbjct: 264 TLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAK 323
Query: 284 GIKPCYTTWELLTWGYLKKGQMEK---VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
P T+ L G+ ++E+ +LE K A G + V + ++ A Y++ +
Sbjct: 324 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG-IDPDVVTYSIVVAGYSRAKRF- 381
Query: 341 DIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
++ AE + + + Y+SL+ KAG++
Sbjct: 382 -VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 416
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 34/367 (9%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHML 87
+ F + K P+ T + L+H K A LM++M+ CP + YN +L
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA---TCCPADTVSYNALL 301
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-- 144
+ Y G++++ Q+ +E+ K+ PD +TY + + + E A + LE KT
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAG 360
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
IDPD ++YS + + Y + + +AA ++EM R N V YSSL+ G + +
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLA 262
+ K + K + YT VI L E+A + +E ++ +P V N ++
Sbjct: 421 EVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLLEEM--VNKRVEPSVGTFNSVIG 474
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK------KAI 316
A ++ A + G++P T+ L G+ + G+ME E F+ K
Sbjct: 475 ALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKS 534
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN-----AGHVSTEIYNSLLRT-- 369
S VP+ +A L + +ID A ++ LR+ A I + LLR
Sbjct: 535 SSAANLVPEQAF-SALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGR 593
Query: 370 YAKAGKM 376
+AGK+
Sbjct: 594 TEEAGKL 600
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 128/315 (40%), Gaps = 49/315 (15%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMEL 164
+++ +P+ TYN+ + A + E++ K + PD ++YST+ + + K
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 165 PEKAATTLKEMEKRT----------------CRK--------------------NRVAYS 188
++A L+EM R CR ++ +S
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE-S 247
+L++ + N DE L+++K++++ +++ + +I+ L + +A ++ E E
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180
Query: 248 ISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
G P V L+ + LE A + + P T+ L G K G +
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL----VTLRNAGHVSTE 361
++ L+ F++ + + VP+ T + L +D A L+ T A VS
Sbjct: 241 DQALDLFRRM--TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVS-- 296
Query: 362 IYNSLLRTYAKAGKM 376
YN+LL Y + G++
Sbjct: 297 -YNALLDGYCRLGRI 310
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 44/277 (15%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQN---KKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
E FFE++P+ MR ++LL SY + K +AE++ +KM + G L P PYN M +
Sbjct: 128 EKFFESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTS 187
Query: 89 LYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
LY S G DKV ++L+E+K+N D VT N L A+ +D T +K FL +K
Sbjct: 188 LYSSLGNRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDK-FLADRKEITRL 246
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D ++ + Y++ G ++V R+W
Sbjct: 247 DGLTMLAMAKAYVR-----------------------------------DGEIEDVHRVW 271
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI-YDEWESISGTGDPRVPNILLAAYIN 266
K + K N+ E+ +I SL+KLG+ + AE I Y+EWE D R+P++L++ Y
Sbjct: 272 DKYKATRQKDNE-EFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYRE 330
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ + A+ N+ T I+ T LL KKG
Sbjct: 331 KGMVMKADKLVNK--TLWIRGLATPITLLLEEMDKKG 365
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 32 ENFFEN-LPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNL 89
ENFFE+ +P+ M+ LL Y ++ + ++AEA+ EKM E G P+N +++L
Sbjct: 426 ENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISL 485
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 125
Y G+L V +L ++K KN PD+VT N L A A
Sbjct: 486 YSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANA 522
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 130/276 (47%), Gaps = 9/276 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P+ S AL+ +Y + + AEA+ +M G L Y +L ++ + + ++
Sbjct: 149 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEV 208
Query: 103 LQEL--KKNT--SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ L K+N+ PD +++ + + E A K F + + + ++Y++L S
Sbjct: 209 FETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSF 268
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ + + +M++ R + V+Y+ L+ Y ++E L ++++M+ + +
Sbjct: 269 ETNYK---EVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPS 325
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y ++ + G E+A ++ T D +L+AY+N + +E AE+F+
Sbjct: 326 HKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFK 385
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
RL G+KP T+ L G+ K +EK++E +++
Sbjct: 386 RLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEE 421
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 7/261 (2%)
Query: 32 ENFFENLPDKMRGP-DTCSALLHSYVQNKKSA----EAEALMEKMSECGFLKCPLPYNHM 86
E FE L +K P + + H + +K A +A + M+E G + + YN +
Sbjct: 206 EEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSL 265
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
++ + ++ K+ +Q + PDVV+Y L + A +E A F E+ +
Sbjct: 266 MSFETNYKEVSKIYDQMQ--RSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVR 323
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P +Y+ L + + E+A K M + C + +Y+++LS Y N +
Sbjct: 324 PSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENF 383
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+K++ K N Y +I K+ EK IY+E + S + + ++ AY
Sbjct: 384 FKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGK 443
Query: 267 RNQLEMAESFYNRLVTKGIKP 287
A +Y + G+ P
Sbjct: 444 NKDFGSAVIWYKEMEHHGVPP 464
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 141/323 (43%), Gaps = 5/323 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++++ ++ K + + ++ E G + YN +++ Y S G +++ +++ +
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K SP V TYN + E A++ F E+ ++ + PD +Y +L K
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ +M R + V +SS++SL+T G D+ L + + ++ YT +
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + G A N+ +E D N +L R L A+ +N + + +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P T +L G+ K G ++ +E F+K +R V + + + K+ GDID
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV---GDIDT 533
Query: 345 AEHLLVTLRNAGHVSTEIYNSLL 367
A+ + + + + T I S+L
Sbjct: 534 AKEIWADMVSKEILPTPISYSIL 556
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 130/297 (43%), Gaps = 3/297 (1%)
Query: 32 ENFFENLPDKMRGPD-TC-SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E F ++ + PD C S+++ + ++ +A + E G + + Y ++
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + + E L++ + DVVTYN L + A+K F E+ + + PD
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+ + L + K+ + A ++M+++ R + V Y++LL + +G D IW
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+S Y+ ++++L G +A ++DE S + + N ++ Y
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
ESF +++++G P ++ L +G++++ M K KK VPD
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 15/290 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN----GQLDKVPQM 102
T + +LH + K EA+ L +M+E + P ++ L + I G L ++
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTE----RALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT-SLYI 160
Q++K K DVVTYN L D +TA++ + ++ +I P ISYS L +L
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K L E A EM + + + +S++ Y G + +KM+S +
Sbjct: 563 KGHLAE-AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYN 278
Y +I V+ KA + + E G P V N +L + +NQ++ AE
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+++ +G+ P +T+ + G++ + + + + + R + PD +
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ--RGFSPDDKF 729
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/361 (17%), Positives = 137/361 (37%), Gaps = 35/361 (9%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN- 109
L+ +YVQ +K EA + GF N ++ + G ++ + QE+ ++
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+V T N+ + A E ++++ + PD ++Y+TL S Y L E+A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ M + Y+++++ G + ++ +M+ + Y ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G+ + E ++ + S D + +++ + L+ A ++N + G+ P
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 290 TTWELLTWGYLKKGQMEKVLE------------------------CFKKAIGSV------ 319
+ +L GY +KG + + C +K +G
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 320 ---RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
R PD +T + + G++ A L ++ + YN+LL + K G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 376 M 376
+
Sbjct: 531 I 531
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSE--CGFLKCPLPYNHML 87
E+F E + + PD S L++ +V+ + ++A L++KM E G + YN +L
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 88 NLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ + Q+ + +L++ +++ +PD TY + SQ++ A + E+ +
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 147 PD 148
PD
Sbjct: 725 PD 726
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 155/367 (42%), Gaps = 46/367 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ +Y ++ + EA ++M E G + + +N M+++Y +NGQ +V +++ +
Sbjct: 299 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTM 358
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K + +PD TYN+ ++ ND E A F E+K + PD +SY TL + + +
Sbjct: 359 KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVK 418
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR---IWKKMMSLFAKMNDAEYT 223
+A + EM+ + S+L +Y + E+L W K + M+ Y+
Sbjct: 419 EAEELIAEMDDNDVEIDEYTQSALTRMYI----EAEMLEKSWSWFKRFHVAGNMSSEGYS 474
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
I + + G +AE ++ + ++ N+++ AY E A + +++
Sbjct: 475 ANIDAYGERGYLSEAERVFICCQEVNKRTVLEY-NVMIKAYGISKSCEKACELFESMMSY 533
Query: 284 GIKPCYTTWELLTW-----------------------------------GYLKKGQMEKV 308
G+ P T+ L ++K GQ+
Sbjct: 534 GVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 593
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLL 367
E +K+ + PD + N + G++ A + ++ AG ++ IYNSL+
Sbjct: 594 EEVYKEMVE--YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLI 651
Query: 368 RTYAKAG 374
+ Y K G
Sbjct: 652 KLYTKVG 658
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 143/297 (48%), Gaps = 17/297 (5%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAE----AEALMEKMSECGFLKCPLPYNHMLNL 89
FE++ PD C+ ++ VQ SA+ A+ +EKM E G++ +PY +++
Sbjct: 526 LFESMMSYGVTPDKCT--YNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISS 583
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ GQL+ ++ +E+ + N PDVV Y + + A A + + A +K+ I +
Sbjct: 584 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPEN 643
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV--AYSS--LLSLYTNMGYKDEVL 204
+ Y++L LY K+ ++A +++ R+C + + Y+S +++LY+ +
Sbjct: 644 SVIYNSLIKLYTKVGYLDEAEAIYRKL-LRSCNETQYPDVYTSNCMINLYSQRSMVRKAE 702
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
I++ M + N+ + ++ K G FE+A I + + DP N +L Y
Sbjct: 703 AIFESMKQR-REANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLY 761
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ + A + +V+ GI+P +T++ L +K G +K + + I +RK
Sbjct: 762 ALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAV----RKIEEIRK 814
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQML---QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
Y+ ++ Y G L + ++ QE+ K T V+ YN+ + A E A + F
Sbjct: 473 YSANIDAYGERGYLSEAERVFICCQEVNKRT---VLEYNVMIKAYGISKSCEKACELFES 529
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + PD +Y+TL + ++P+KA L++M + + + Y +++S + +G
Sbjct: 530 MMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 589
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ ++K+M+ + + Y +I++ G ++A + + + + + N
Sbjct: 590 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNS 649
Query: 260 LLAAYINRNQLEMAESFYNRLV 281
L+ Y L+ AE+ Y +L+
Sbjct: 650 LIKLYTKVGYLDEAEAIYRKLL 671
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 12/235 (5%)
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM ++ + Y +L+ +Y+ G K L KM + + ++ V+ K
Sbjct: 211 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 270
Query: 234 EFEKAENIYDEWESISGTGDPRVP------NILLAAYINRNQLEMAESFYNRLVTKGIKP 287
EF+KAE + +W D V N ++ Y Q++ A + R++ +GI P
Sbjct: 271 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 330
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + Y GQ +V K PD R + + DI+ A
Sbjct: 331 TTVTFNTMIHVYGNNGQFGEVTSLMKTMKFHC---APDTRTYNILISLHTKNNDIERAGT 387
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKVL 399
++ AG + Y +LL ++ K ++ M ++V++D TQ L
Sbjct: 388 YFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSAL 442
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPY--NHMLNLYISNGQLDKVPQMLQE 105
++L+ Y + EAEA+ K+ C + P Y N M+NLY + K + +
Sbjct: 648 NSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKAEAIFES 707
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K+ + T+ + L E A + ++++ +I D +SY+++ LY
Sbjct: 708 MKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRF 767
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A T KEM + + + SL ++ +G + +R +++ K +
Sbjct: 768 KEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAVRKIEEIRKKEIKRGLELWIST 827
Query: 226 ISSLVKLGEFE 236
+SSLV + + E
Sbjct: 828 LSSLVGIEDCE 838
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 141/329 (42%), Gaps = 6/329 (1%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
PD + L+ + + E LME+M S+ G + YN +++ + G+++K +
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 102 MLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ E+ K+ +P+VVT N + +A F+E ++ + D ++Y+ L + +
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ EKA EM K C + + Y +L+S ++ G + + ++ L + +
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +I + +F + + E E D N L+A L+ A+ ++
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
+ G+ P T+ + Y G + +E FK + + K P+ + N L +
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKD-MKAASKVPPNTVIYNILINSLCKNN 679
Query: 341 DIDGAEHLLVTLRNAGHV-STEIYNSLLR 368
+ A L+ ++ G +T YN++ +
Sbjct: 680 KVKSAVSLMEDMKIWGVTPNTTTYNAIFK 708
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 12/243 (4%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y ++N + + +K ++ E LK SPD + Y ++ + A E
Sbjct: 490 VTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAE 549
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
LKK I PD + Y+TL + + + LKEME+ + + + Y++L++ + G
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-- 257
++ +KM+ A Y VI++ G +A I+ + ++ S +VP
Sbjct: 610 LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAAS-----KVPPN 664
Query: 258 ----NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
NIL+ + N+++ A S + G+ P TT+ + G + +EKV E
Sbjct: 665 TVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMD 724
Query: 314 KAI 316
+ I
Sbjct: 725 RMI 727
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 133/342 (38%), Gaps = 21/342 (6%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C++LL + LMEKM E + + ++N ++D ++L+++
Sbjct: 308 CNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMS 367
Query: 108 K---------NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTS 157
+ PDVV YN + ++ ++ K PD I+Y+ L
Sbjct: 368 GGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLID 427
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ K EK EM K N V ++L+ G + + + K
Sbjct: 428 GFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKG 487
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ YT +I++ + FEKA +++E + D V L++ + ++ A
Sbjct: 488 DAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVL 547
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL- 336
L GI+P + L G+ + + +V E K+ + K PD T YN L
Sbjct: 548 AELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK--PD----TITYNTLI 601
Query: 337 ---EEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAG 374
+ GD+ A+ ++ + AG V T Y +++ Y G
Sbjct: 602 AYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNG 643
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 6/281 (2%)
Query: 33 NFF-ENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
NFF E M+G T +AL++++ +A L +M + G + Y +++ +
Sbjct: 475 NFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGF 534
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G++ +L ELKK PD V YN + N + E+++ + PD
Sbjct: 535 SQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDT 594
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y+TL + K + A +++M K Y ++++ Y G +E + I+K
Sbjct: 595 ITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKD 654
Query: 210 MMSLFAKM--NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
M + +K+ N Y +I+SL K + + A ++ ++ + T + N + +
Sbjct: 655 MKAA-SKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
LE F +R++ P Y T E+LT G++E++
Sbjct: 714 KDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERL 754
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 161/398 (40%), Gaps = 47/398 (11%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A Q R E +P PD T + ++ Y++ A + E+M E G
Sbjct: 212 ALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG--- 268
Query: 79 CP---LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAE 134
CP + N ++N + G++D+ +QE + + PD TYN + + A
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS-- 192
+ + +DPD +Y++L S K+ E+A L +M R C N V Y++++S
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388
Query: 193 --------------LYTNMGYKDEVLRI------------WKKMMSLFAKM-------ND 219
L T+ G +V K M LF +M ++
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y +I SL + E+A N+ E E + + N L+ + ++E AE ++
Sbjct: 449 FTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDE 508
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +G+ T+ L G K ++E + + I + PD + +
Sbjct: 509 MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI--MEGLRPDKFTYNSLLTHFCKT 566
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
GDI A ++ T+ ++G + Y +L+ KAG++
Sbjct: 567 GDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 152/356 (42%), Gaps = 10/356 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
R+ QA + A F PD+ T + L++ + + A +++ M G
Sbjct: 288 RIDQALSFIQEAVSEGFR--PDQF----TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDP 341
Query: 79 CPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
YN +++ G++++ ++L Q + ++ SP+ VTYN +++ +N + A +
Sbjct: 342 DIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIA 401
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
L I PD ++++L + A +EM+ + CR + Y+ L+ +
Sbjct: 402 RLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSS 461
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+E L + K+M N Y +I K E+AE I+DE E + D
Sbjct: 462 RKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTY 521
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L+ ++E A ++++ +G++P T+ L + K G ++K + +
Sbjct: 522 NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAK 372
S PD + L + G + A LL +++ G V T YN +++ K
Sbjct: 582 S--GCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFK 635
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 138/356 (38%), Gaps = 41/356 (11%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +LN+ + +L V + ++ DV T+N+ + A + A E+
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP 230
Query: 142 KTKIDPDWISYSTLTSLYI-----------------------------------KMELPE 166
+ PD +++T+ YI K +
Sbjct: 231 SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRID 290
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + ++E R ++ Y++L++ +G+ + + M+ + Y +I
Sbjct: 291 QALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLI 350
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S L KLGE E+A I D+ S + + N ++++ N+++ A L +KGI
Sbjct: 351 SGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGIL 410
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ L G + ++ F++ G + PD + L ++ A
Sbjct: 411 PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG--KGCRPDEFTYNMLIDSLCSSRKLEEAL 468
Query: 347 HLLVTLR-NAGHVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
+LL + N + IYN+L+ + K ++ I + M+ V D+ T L
Sbjct: 469 NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 3/258 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD YN+ L N + E A + + +I D +++ L K A
Sbjct: 166 PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILM 225
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
++EM + +++++ Y G D LRI ++M+ D +I+ K
Sbjct: 226 MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCK 285
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G ++A + E S D N L+ + A + ++ G+ P T
Sbjct: 286 QGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYT 345
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L G K G++E+ ++ + + R P+ A + L ++ +D A +
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVS--RDCSPNAVTYNAIISSLCKENRVDEATEIARL 403
Query: 352 LRNAGHV-STEIYNSLLR 368
L + G + +NSL++
Sbjct: 404 LTSKGILPDVCTFNSLIQ 421
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELK 107
+ L+ + +NK+ EAE + ++M G + + YN +++ + +++ Q++ Q +
Sbjct: 487 NTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM 546
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ PD TYN L D + A + + +PD ++Y+TL S K +
Sbjct: 547 EGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQV 606
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
A+ L+ ++ + AY+ ++ E +R++++M+
Sbjct: 607 ASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREML 650
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE-YTCVISSL 229
L+EM+ C +R + + Y DEV+ I K M + D Y +++ L
Sbjct: 119 VLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVL 178
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
V + + E+ + D NIL+ A +Q+ A + + G+ P
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
TT+ + GY++ G ++ L ++ + G V + LI N +QG ID A
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLI----NGFCKQGRIDQALS 294
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ + G + YN+L+ K G
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIG 322
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 142/332 (42%), Gaps = 7/332 (2%)
Query: 72 SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDK 130
S GF P PYN M++L D Q++ +K +N + T+++ +
Sbjct: 134 SRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLA 193
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A AF ++ PD I++S L S+ + +A + ++ + + + Y++L
Sbjct: 194 SEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKF-EPDVIVYTNL 252
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + G E R++ +M N YT VI +L + G+ +A +++ E +
Sbjct: 253 VRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGC 312
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ N LL ++ + E YN++ G P T+ L + K G +++ L+
Sbjct: 313 EPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALK 372
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN-AGHVSTEIYNSLLRT 369
+ + P+ + + + D++GA L ++ +T YN L+R
Sbjct: 373 VLNSMVK--KGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRM 430
Query: 370 YA--KAGKMPLIIVERMQKDNVQMDAETQKVL 399
+ K+ M L + + M +D+V+ + T VL
Sbjct: 431 FVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVL 462
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/335 (17%), Positives = 139/335 (41%), Gaps = 7/335 (2%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
++A+ R + PDK+ S L+ + +++ EA++ + + + F +
Sbjct: 194 SEAVHAFNRMEDYNCKPDKI----AFSILISILCRKRRATEAQSFFDSLKD-KFEPDVIV 248
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +++ + G + + ++ E+K P+V TY + + A A F E+
Sbjct: 249 YTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEML 308
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+P+ I+++ L +++K EK +M++ C + V Y+ L+ + G D
Sbjct: 309 DVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLD 368
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E L++ M+ N + + + S+ KL + A +Y + + + + NIL+
Sbjct: 369 EALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILM 428
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+++ +M + ++P T+ +L Y G + F++ + +
Sbjct: 429 RMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEE-KC 487
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
P + +L + G + E L+ + + G
Sbjct: 488 LKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRG 522
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 165/405 (40%), Gaps = 49/405 (12%)
Query: 35 FENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F + +K+ GP S ++ + + A + M + G L YN +L+
Sbjct: 259 FLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCV 318
Query: 93 NGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G +D+ +++K+ PDVVTYN A K ++ ++PD ++
Sbjct: 319 AGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVT 378
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + +M E+A +E R + N + Y+ LLS +G +E L ++ +M
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438
Query: 212 SLFAKMNDAEYTCVISSLVK------------------------------LGEFE----- 236
+L + + Y+ +I L K LG F+
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
+A N +D W + D + NI++ Y+ + + A Y +++ +GI P T+ L
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558
Query: 297 WGYLKKGQM---EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
G+ ++G + K+LE + ++ VP T N E G++ H L +
Sbjct: 559 NGFCRRGDLMEARKMLEVIR-----LKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME 613
Query: 354 NAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
V T + Y L++ + KM L ++E M + D+ T
Sbjct: 614 ANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVT 658
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 153/369 (41%), Gaps = 44/369 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQMLQ 104
T S L+H + K +A + + ++ + P + N +++ + G +D
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNK---VVGPSIVSINTIMSKFCKVGLIDVARSXFC 295
Query: 105 ELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ KN D +YN+ L + A +++K ++PD ++Y+TL ++ +
Sbjct: 296 LMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLG 355
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
L A +++M + + V Y++L+ + MG +E L++ ++ +S K+N Y
Sbjct: 356 LMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYN 415
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY------ 277
++S L K+G E+A ++DE E++ D V +IL+ ++ A Y
Sbjct: 416 MLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK 475
Query: 278 --------NRLVTKGI---------KPCYTTW------------ELLTWGYLKKGQMEKV 308
R V G+ + + TW ++ GY++ + +
Sbjct: 476 RKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
++ + K I R P N +GD+ A +L +R G V S Y +L+
Sbjct: 536 MQLYYKMIE--RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 368 RTYAKAGKM 376
Y + G M
Sbjct: 594 NAYCEVGNM 602
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 139/332 (41%), Gaps = 14/332 (4%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ----E 105
A+L +N +EA + + ++ + YN M++ Y+ +LD + + +Q
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV---RLDGIAEAMQLYYKM 542
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ +P VVT+N + + D A K ++ + P ++Y+TL + Y ++
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ L EME V Y+ L+ E L++ + M + + Y +
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPR--VPNILLAAYINRNQLEMAESFYNRLVTK 283
I K E KA +Y+ + DP +L+ A L+ + + +
Sbjct: 663 IQCFCKGKEITKALQLYNMM--LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDR 720
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
I T+ + + KGQ+ K L F + + + +V R +A N+L ++G I
Sbjct: 721 NITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLA--KGFVISIRDYSAVINRLCKRGLIT 778
Query: 344 GAEHLLVTLRNAGHV-STEIYNSLLRTYAKAG 374
A++ V + + G EI ++L + + G
Sbjct: 779 EAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 147/347 (42%), Gaps = 5/347 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ Y K EA +L+E+ G + + YN +L G+ DK ++ +E+K+
Sbjct: 205 NTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR 264
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ P++ TYN+ + + E A K +K+ + P+ + + + K + ++A
Sbjct: 265 DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEA 324
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ + M+ + C + + SL+ G D+ RI+++M+ N YT +I +
Sbjct: 325 CSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRN 384
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K E +Y E + D + N + + E + + + +G P
Sbjct: 385 FFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPD 444
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
++ +L +K G + E + + V D R + + G ++ A L
Sbjct: 445 TRSYSILIHSLVKAGFARETYELYYAM--KDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 502
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
L ++ GH T + Y S++ AK ++ ++ E + + ++++
Sbjct: 503 LEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELN 549
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 140/314 (44%), Gaps = 9/314 (2%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAAC 124
AL +M E G+ ++ ++ G++D +L E+K NT D+V YN+ +
Sbjct: 82 ALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCF 141
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ A K F E+K + PD ++Y+++ + K ++A ++ME+
Sbjct: 142 GKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCA 201
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
AY++++ Y + G DE + ++ + + Y C+++ L K G+ +KA I++E
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261
Query: 245 WESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ P +P NI++ +E A + + G+ P T ++ K
Sbjct: 262 MKR---DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKA 318
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STE 361
++++ F+ + PD + + L +QG +D A + + +A + +
Sbjct: 319 QKLDEACSIFEGM--DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVV 376
Query: 362 IYNSLLRTYAKAGK 375
+Y SL+R + K +
Sbjct: 377 VYTSLIRNFFKCDR 390
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 128/318 (40%), Gaps = 44/318 (13%)
Query: 24 QALQTRARENFFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A +T FE + + PDT S L+HS V+ + E L M + G +
Sbjct: 422 KAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR 481
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN +++ + +G+++K Q+L+E+K P VVTY + A + + A F E
Sbjct: 482 AYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 541
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K I+ N+V YSSL+ + +G
Sbjct: 542 KSNGIEL-----------------------------------NQVIYSSLIDGFGKVGRV 566
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
DE + ++MM N + C++ LVK E +A + + + T + IL
Sbjct: 567 DEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCIL 626
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ + A F+ + +G+KP T+ + G K G + + F++ S
Sbjct: 627 INGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRAS-- 684
Query: 321 KWVPDHRLITAAYNKLEE 338
+PD +A+YN + E
Sbjct: 685 GGIPD----SASYNAMIE 698
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 115/300 (38%), Gaps = 49/300 (16%)
Query: 96 LDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
D + Q+L E+ P T +A+C A ++ K P +
Sbjct: 7 FDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAF----- 61
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
AY++L+ + +G D +L ++ +M L
Sbjct: 62 ------------------------------SAYTTLIGALSEVGESDRMLALFNQMQELG 91
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
++N T +I + G + A ++ DE +S + D + N+ + + +++MA
Sbjct: 92 YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
F++ + G+ P T+ + K ++++ +E F++ + VP AYN
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM--EQNRQVP----CAYAYN 205
Query: 335 KL----EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
+ G D A LL R G + + + YN +L K GK L I E M++D
Sbjct: 206 TMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRD 265
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 5/271 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ALL +Y EA + ++ + GF + Y +LN Y + + K ++ + +K+
Sbjct: 366 NALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKR 425
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P++V+YN + A S E A + E+++ KI P+ +S TL + + K
Sbjct: 426 NNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVK 485
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
T L E R + N VAY+S + Y N+G D+ + ++ M K + YT +IS
Sbjct: 486 IDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLIS 545
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR----NQLEMAESFYNRLVTK 283
K+ +F +A + +E + V + ++ AY + Q+ AES +N + +
Sbjct: 546 GCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSL 605
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
G P T+ + Y + EK+ F++
Sbjct: 606 GCSPDVVTYTAMLDAYNAAEKWEKLYALFEE 636
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 175/377 (46%), Gaps = 24/377 (6%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEA----EALMEKMSECGFLKCP--LPYN 84
++FE + PDT + ++H V+ K+ +A ++ EK SEC P + +
Sbjct: 276 SYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECH----PDVVTFT 331
Query: 85 HMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
M++LY G ++ L + P++V+YN L A A++ + A + F E+K+
Sbjct: 332 SMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQN 391
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
PD +SY++L + Y + P+KA K +++ + N V+Y++L+ Y + G ++
Sbjct: 392 GFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDA 451
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ I ++M N ++++ + G+ K + + E + N + +
Sbjct: 452 IEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGS 511
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVR 320
YIN + + A YN + K IK T+ +L G K + + L ++ + +
Sbjct: 512 YINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMS 571
Query: 321 KWVPDHRLITAAYNKLEEQ-GDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKMP 377
K V + I AY+K G I AE +++ G S ++ Y ++L Y A K
Sbjct: 572 KEV--YSSIICAYSKQASALGQIIEAESTFNLMKSLG-CSPDVVTYTAMLDAYNAAEKWE 628
Query: 378 LI--IVERMQKDNVQMD 392
+ + E M++++V++D
Sbjct: 629 KLYALFEEMEENDVKLD 645
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 155/395 (39%), Gaps = 43/395 (10%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
D + ++ + ++ ++ +A L +M +C YN ++N + GQ ++ +
Sbjct: 151 DIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDD 210
Query: 106 -LKKNTSPDVVTYNLWLAACASQND-KE------------------------TAEKA--- 136
L+ P TYN + AC S + KE TA K+
Sbjct: 211 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQ 270
Query: 137 -------FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM--EKRTCRKNRVAY 187
F +K T I PD +++ + +K++ +KA M +K C + V +
Sbjct: 271 YSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTF 330
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+S++ LY+ G+ + + M++ K N Y ++ + G +A +++E +
Sbjct: 331 TSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQ 390
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D LL AY + + A + + +KP ++ L Y G +E
Sbjct: 391 NGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLED 450
Query: 308 VLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSL 366
+E ++ + V + AA + ++ ID L ++T YNS
Sbjct: 451 AIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTV--LSAAEMRGIKLNTVAYNSA 508
Query: 367 LRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ +Y G+ + + M+K ++ D+ T VL
Sbjct: 509 IGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVL 543
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 126/324 (38%), Gaps = 42/324 (12%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+KN YN+ + A N + A F E++K + PD +Y+ L + + +
Sbjct: 143 QKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWR 202
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM---------------- 210
A + +M + +R Y++L++ + G E L + KKM
Sbjct: 203 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIML 262
Query: 211 ------------MSLF-------AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+S F + + + +I LVKL +++KA +I++ +
Sbjct: 263 TAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSE 322
Query: 252 GDPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
P V ++ Y +E E+ +N ++ +G+KP ++ L Y +G + L
Sbjct: 323 CHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEAL 382
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLR 368
+ F + + PD T+ N A + + RN + YN+L+
Sbjct: 383 QVFNEI--KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALID 440
Query: 369 TYAKAGKM--PLIIVERMQKDNVQ 390
Y G + + I+ M++D +
Sbjct: 441 AYGSNGLLEDAIEILREMEQDKIH 464
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 102/270 (37%), Gaps = 40/270 (14%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQN----------- 128
+ YN + YI+ G+ DK + + KK D VTY + ++ C +
Sbjct: 503 VAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEE 562
Query: 129 --------DKET--------------------AEKAFLELKKTKIDPDWISYSTLTSLYI 160
KE AE F +K PD ++Y+ + Y
Sbjct: 563 MMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYN 622
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
E EK +EME+ + + +A ++L+ + G VL + + M ++D
Sbjct: 623 AAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDT 682
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+ ++S+ L +++ A ++ E N+ L + ++E+ + ++
Sbjct: 683 IFFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKM 742
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ G + + T+ +L L G K LE
Sbjct: 743 LASGAEVNFNTYSILLKNLLSSGNWRKYLE 772
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 3/272 (1%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T + L Y K A M E G + +N +L++ + +++ +L+
Sbjct: 136 PKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLR 195
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
LK PD V+YN+ + A + E+ + I+P ++Y+T+ Y +
Sbjct: 196 TLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQ 255
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A EM+KR C + V+Y++++ + G + R++ +M+ N A Y
Sbjct: 256 IKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNA 315
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVT 282
+I K + A +++E G P V N+++ + +E A F R+
Sbjct: 316 LIQVFCKKDSVQNAVAVFEEMVR-EGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGE 374
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
G++ T+ ++ + G++EK LE F K
Sbjct: 375 HGLRASVQTYNVVIRYFCDAGEIEKGLEVFGK 406
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 3/243 (1%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACA 125
L +M E G + YN +++ Y G L++V + E+K PD++TYN L C
Sbjct: 252 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN-GLINCY 310
Query: 126 SQNDK-ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ +K A + F E+K + P+ ++YSTL + K + + A L +M + N
Sbjct: 311 CKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNE 370
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
Y+SL+ G E ++ M+ K+N YT ++ L K G +AE ++
Sbjct: 371 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 430
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ + +V L+ YI ++E A ++ IKP + + WG+ + +
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490
Query: 305 MEK 307
+E+
Sbjct: 491 LEE 493
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 136/332 (40%), Gaps = 4/332 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ + + EA L+ M + G + Y +L+ G++ + ++ +
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
LK SP+ Y + E A K ++ + I PD I Y ++ +
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ L+EM+ R N V ++++ Y G + L +++M + + Y +
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L + G E A + + S+ + V L+ N +E A+ ++ + +G+
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T + L G LK G +++ L + ++ D + T+ + + G++ A
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF--DLHVYTSLVSGFSQCGELHQA 669
Query: 346 EHLLVTLRNAGHVSTEIYN-SLLRTYAKAGKM 376
+ G + E+ LLR Y K G++
Sbjct: 670 RKFFNEMIEKGILPEEVLCICLLREYYKRGQL 701
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 158/389 (40%), Gaps = 43/389 (11%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L+ Y + E +L +M + G + + YN ++N Y ++ + +
Sbjct: 263 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 322
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+K N P+VVTY+ + A + + A K ++++T + P+ +Y++L K
Sbjct: 323 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCK 382
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+A L +M + + N V Y++LL G E +++ M+ N
Sbjct: 383 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 442
Query: 222 YTCVISSLVKLGEFEKAEN-----------------------------------IYDEWE 246
YT ++ +K E A I +E +
Sbjct: 443 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 502
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S + +P + ++ AY + A +F+ + G++ T+ +L G + G +E
Sbjct: 503 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVE 562
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNS 365
++ F + + + P+ + T+ + L I+ A+ L ++ G + +
Sbjct: 563 LAVDYFCRMLSLGLQ--PNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTA 620
Query: 366 LLRTYAKAGKM--PLIIVERMQKDNVQMD 392
L+ K G + L+++ RM + ++ D
Sbjct: 621 LIDGNLKHGNLQEALVLISRMTELAIEFD 649
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
NGQL V + + + +P V TYN+ + + D E + + F+++++ + PD +
Sbjct: 209 GNGQL--VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV 266
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y++L Y K+ E+ A+ EM+ C + + Y+ L++ Y + +M
Sbjct: 267 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 326
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K N Y+ +I + K G + A + + + L+ A L
Sbjct: 327 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNL 386
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
A N ++ G+K T+ L G K G+M + E F+ +
Sbjct: 387 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 117/300 (39%), Gaps = 36/300 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALL + + EAE + M + G Y +++ YI +++ ++L+++
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ N PD++ Y + SQ E + E+K I + + +T+ Y K
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A +EM+ V Y L+ G + + + +M+SL + N A YT +
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586
Query: 226 ISSLVKLGEFEKAENIYDEWES-------------ISGT--------------------- 251
I L E A+ ++DE + I G
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 646
Query: 252 -GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D V L++ + +L A F+N ++ KGI P L Y K+GQ+++ +E
Sbjct: 647 EFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIE 706
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 119/286 (41%), Gaps = 20/286 (6%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD-KVPQML 103
P + ++ +Y + KS++A ++M + G + Y +++ G ++ V
Sbjct: 510 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFC 569
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ L P+V Y + N E+A+K F E++ + PD +++ L +K
Sbjct: 570 RMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHG 629
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++A + M + + Y+SL+S ++ G + + + +M+ +
Sbjct: 630 NLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCI 689
Query: 224 CVISSLVKLGEFEKAENIYDEWESI--SGTGDPRVP------NILLAAYINRNQLEMAES 275
C++ K G+ ++A + +E E + S D ++ N+ L AY+ + ++
Sbjct: 690 CLLREYYKRGQLDEAIELKNEMERMAYSFEFDAQLAYNEQGVNLTLHAYLYL-KFDIQHQ 748
Query: 276 FYNRLVTKGIKPCYTTWELLTWGY-----LKKGQMEKVLECFKKAI 316
NR T + P W ++ W + + M K+ FK I
Sbjct: 749 L-NRFGTSTMGP----WSVIGWTWTIIQLFIRWIMRKIRRSFKSLI 789
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 148/346 (42%), Gaps = 20/346 (5%)
Query: 42 MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
M +T + ++H+ ++ K EA ++ ++ + G + +N M++ G +D +
Sbjct: 235 MENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALK 294
Query: 102 MLQELK----KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++++++ + P+ VTYN + AE+ E+ K I+P+ +Y+T+
Sbjct: 295 LVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIE 354
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
Y + E+A EM +R N V Y+S++ G D + F M
Sbjct: 355 GYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLV-------FTDM 407
Query: 218 NDAE-----YTCVI--SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+D + +TC I L + G A ++ + D NIL+ N
Sbjct: 408 SDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNF 467
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A R+ +G+ P T+ L G+ K+G +E ++ + K + K P+ +
Sbjct: 468 AAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEK--PNLLVYN 525
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ N L + G +D A L+ L+ G V T YN+L+ Y GK
Sbjct: 526 SIINGLCKDGLVDVARSLVDVLQRMGLVDTITYNTLINGYFNCGKF 571
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 6/263 (2%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F ++ DK D TCS L +N A + ++ E ++ +N ++N
Sbjct: 404 FTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCK 463
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ Q+L + + PDVVT+ + + + E+A + + ++ K + P+ +
Sbjct: 464 SNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLV 523
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+++ + K L + A +L ++ +R + + Y++L++ Y N G D+ ++ M
Sbjct: 524 YNSIINGLCKDGLVD-VARSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQ 582
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN-QL 270
+ + A Y VI L K G ++A+ + + G + L IN+N
Sbjct: 583 NAGILASSATYNTVIKFLCKFGCVQEAKELM-TMMVLWGVLPDNITYRTLVININKNCSA 641
Query: 271 EMAESFYNRLVTKGIKPCYTTWE 293
E ++ +V KG+ P T+E
Sbjct: 642 EEVIELHDYMVLKGVVPDKLTYE 664
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C N + +L+ T +G + KK+ + + +S L+K+ E +
Sbjct: 164 CESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFW 223
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
+Y E S + N+++ A +L+ A S + R++ GI P T+ ++ G
Sbjct: 224 IVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGA 283
Query: 300 LKKGQMEKVLECFKK----AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL---LVTL 352
K G M+ L+ +K + GS++ P+ + + + G I AE L ++ +
Sbjct: 284 CKMGDMDLALKLVRKMEIMSAGSIK---PNSVTYNSLIDGFCKIGGITVAEELRNEMMKI 340
Query: 353 RNAGHVSTEIYNSLLRTYAKAG 374
+V T Y +++ Y++AG
Sbjct: 341 DIEPNVRT--YATMIEGYSRAG 360
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 121/270 (44%), Gaps = 7/270 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ----MLQ 104
+AL+ SY + K AEA+ +M G + Y +L ++ + + + +L
Sbjct: 178 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 237
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
E K PD Y++ + + E A K F + + ++Y++L S +
Sbjct: 238 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK- 296
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ + +M++ + + V+Y+ L+ Y ++E L ++++M+ + Y
Sbjct: 297 --EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + G E+A+ ++ D +L+AY+N + +E AE F+ R+ G
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+P T+ L GY K +EK++E ++K
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 19/309 (6%)
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDK 130
SE FL Y + N NG ++V +L K ++P+V++Y + +
Sbjct: 137 FSEIDFLMLITAYGKLGNF---NGA-ERVLSVLS--KMGSTPNVISYTALMESYGRGGKC 190
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYI---KMELPEKAATTLKEMEKRTCRKNRVAY 187
AE F ++ + +P I+Y + ++ K + E+ TL + +K + ++ Y
Sbjct: 191 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 250
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
++ +Y G ++ +++ M+ + Y ++S E K IYD+ +
Sbjct: 251 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQR 307
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D +L+ AY + E A S + ++ G++P + + +L + G +E+
Sbjct: 308 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 308 VLECFKKAIGSVR--KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
FK S+R + PD T + D++GAE ++ G + Y
Sbjct: 368 AKTVFK----SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 365 SLLRTYAKA 373
+L++ YAKA
Sbjct: 424 TLIKGYAKA 432
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 42/283 (14%)
Query: 32 ENFFENLPDKMRGP-----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
E FE L D+ + P +++ Y + +A + M G + + YN +
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTY----------------------------- 117
++ S ++ K+ +Q + + PDVV+Y
Sbjct: 289 MSFETSYKEVSKIYDQMQ--RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 346
Query: 118 ------NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
N+ L A A E A+ F +++ +I PD SY+T+ S Y+ E A
Sbjct: 347 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 406
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
K ++ N V Y +L+ Y ++++ +++KM K N T ++ + +
Sbjct: 407 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 466
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
F A Y E ES D + N+LL+ +++LE A+
Sbjct: 467 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 509
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 3/244 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKC-PLPYNHMLNLYISNGQLDKVPQMLQE 105
TC+A L + V+ + A + ++M E + Y M+ G++D +ML E
Sbjct: 187 TCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAE 246
Query: 106 L-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L + P VVTYN+ + A E A + +++ + P +++ L + + E
Sbjct: 247 LWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGER 306
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ L+EME+ N V Y+ L+ + G+ + LR++ +M+ K Y
Sbjct: 307 FGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNL 366
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN-QLEMAESFYNRLVTK 283
+ +L K GE E+AE I ++ SI T + N ++A + R +LE S N +VT+
Sbjct: 367 IAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTR 426
Query: 284 GIKP 287
G++P
Sbjct: 427 GMRP 430
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 124/281 (44%), Gaps = 3/281 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H + K EA +++ M G + YN M+ + ++++ ++ ++
Sbjct: 469 TSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDM 528
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD+ T+N L A + E ++K + PD +SY T+ + K +
Sbjct: 529 TRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDI 588
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA L E+ R + N Y++L+ Y G + + M S + + Y +
Sbjct: 589 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 648
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ + G E+A+ I+ + + I++ Y ++ A +++ + ++GI
Sbjct: 649 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 708
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
P T+ L + Y K G E+ + F + +GS +PD+
Sbjct: 709 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGS--GVIPDN 747
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 1/250 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ ++ K EA L M+ GF +N +L+ Y + G++++ +L ++
Sbjct: 504 TYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM 563
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD+V+Y + D A++ EL + P+ Y+ L Y +
Sbjct: 564 KTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDI 623
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A ++ M+ + V Y SL+ + G +E I+ + + YT +
Sbjct: 624 SGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIM 683
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I KLG+ +A ++E S + + L+ AY E A ++ +V G+
Sbjct: 684 IQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGV 743
Query: 286 KPCYTTWELL 295
P T+ L
Sbjct: 744 IPDNITYGTL 753
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S ++ + + K +A+ + ++ + G YN ++ Y NG +
Sbjct: 570 PDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDA 629
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ +K N P VTY + E A+ F + ++ +D I Y+ + Y K
Sbjct: 630 VETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCK 689
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +A +EM R N++ Y++L+ Y+ G +E +++ +M+ ++
Sbjct: 690 LGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNIT 749
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
Y +I+ ++ +K E S + T D R+ NIL
Sbjct: 750 YGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNIL 788
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPE 166
+ P + T N +L A + A + F E+++++ + + SY+ + K +
Sbjct: 179 RGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVD 238
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
L E+ + + V Y+ L+ G +E R+ +M + + +I
Sbjct: 239 AGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILI 298
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ L + F + + E E + + + + N L+ + + A ++ +V K +K
Sbjct: 299 NGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMK 358
Query: 287 PCYTTWELLTWGYLKKGQMEK 307
P T+ L+ K+G+ME+
Sbjct: 359 PTAVTYNLIAKALCKEGEMER 379
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
V +A+ + ++AREN + G + ++ Y + K EA A E+M G
Sbjct: 658 VEEAKTIFSQARENNVD------LGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQN--DKETAEKA 136
L Y ++ Y +G ++ ++ E+ PD +TY +A C+ N DK+ A
Sbjct: 712 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTA 771
Query: 137 FLELKKTKIDPDWISYSTLTS 157
EL + D Y+ L++
Sbjct: 772 --ELSSGALTKDDRMYNILSN 790
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T S+L+ + K + ++ +M + + ++ ++++++ G+L + ++ E
Sbjct: 311 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + +PD +TYN + +N A + F + +PD ++YS L + Y K +
Sbjct: 371 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 430
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ +E+ + N + Y++L+ + G + ++++M+S + Y +
Sbjct: 431 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 490
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L GE KA I+++ + T + NI++ N ++++ A S + L KG+
Sbjct: 491 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 550
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KP T+ ++ G KKG + + F+K
Sbjct: 551 KPDVVTYNVMIGGLCKKGSLSEADMLFRK 579
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 158/357 (44%), Gaps = 16/357 (4%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT S L++ + + +EA AL+++M E + + ++N G++ + +
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + + PD VTY L + A F ++++ I + YS + K
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A + EME + + + V YSSL+ N G D+ ++ ++M+ +
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 346
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++ +I VK G+ +A+ +Y+E + D N L+ + N L A ++ +V
Sbjct: 347 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 406
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE---- 337
+KG +P T+ +L Y K +++ + F++ S + +P+ T YN L
Sbjct: 407 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPN----TITYNTLVLGFC 460
Query: 338 EQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQM 391
+ G ++ A+ L + + G S Y LL G++ L I E+MQK + +
Sbjct: 461 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 517
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 4/323 (1%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-T 110
L + + + K +A L E M + L P+ +N + + Q D V + ++ N
Sbjct: 71 LRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI 130
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
D+ T + + + A K +PD I++STL + + +A
Sbjct: 131 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 190
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ M + R + V S+L++ G E L + +M+ + ++ Y V++ L
Sbjct: 191 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 250
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G A +++ + E + +I++ + + A S +N + KGIK
Sbjct: 251 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 310
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T+ L G G+ + + ++ IG R +PD +A + ++G + A+ L
Sbjct: 311 TYSSLIGGLCNDGKWDDGAKMLREMIG--RNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368
Query: 351 TLRNAGHVSTEI-YNSLLRTYAK 372
+ G I YNSL+ + K
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCK 391
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + K P+T + L+ + Q+ K A+ L ++M G + Y +L+
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 495
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
NG+L+K ++ ++++K+ + + YN+ + + + + A F L + PD +
Sbjct: 496 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 555
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+Y+ + K +A ++M++ C + Y+ L+
Sbjct: 556 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 152/358 (42%), Gaps = 14/358 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKV 99
PD S A+L K+ + LME+M G CP + +N ++ NG ++V
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVG---CPPNVVTFNTLIGYLCRNGLFERV 279
Query: 100 PQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
Q+L Q + +PD+ Y L + E A + + + P+ + Y+T+
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKG 339
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
E E+A L EM C + V ++ L+ + G V+ + ++M+ +
Sbjct: 340 LCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPD 399
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
YT VI+ K G ++A + + + I+L + + AE +
Sbjct: 400 VITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMS 459
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+++ +G P T+ + KKG +E+ +E K+ + + PD + + L +
Sbjct: 460 QMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML--LNGCSPDLISYSTVIDGLGK 517
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII--VERMQKDNVQMDA 393
G D A LL + N G +T IY+S+ +K G++ +I + +Q ++ DA
Sbjct: 518 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDA 575
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ + QN L+E+M E G + + Y ++N + G +D+ +L+ +
Sbjct: 371 LVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ ++Y + L S AE ++ + P+ ++++T+ + K L E+A
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M C + ++YS+++ G DE L + M++ N Y+ + S+L
Sbjct: 491 ELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 550
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + ++D + ++ D + N ++++ R + A F +V+ G P
Sbjct: 551 SKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNE 610
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDH 326
+T+ +L G +G +++ E + G++RK H
Sbjct: 611 STYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFMKH 649
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 119/319 (37%), Gaps = 36/319 (11%)
Query: 93 NGQLDKVPQMLQELKKN--TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G +D+ ++L++L + PDVV+YN L + E+ + P+ +
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++TL + L E+ L +M C + Y+++L G+ + I +M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S K N Y V+ L +E+AE + E D NIL+ + +
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK----------------- 313
+++ G P T+ + G+ K+G +++ + K
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIV 441
Query: 314 -KAIGSVRKWV---------------PDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAG 356
K + S +WV P+ N L ++G ++ A LL L N
Sbjct: 442 LKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC 501
Query: 357 HVSTEIYNSLLRTYAKAGK 375
Y++++ KAGK
Sbjct: 502 SPDLISYSTVIDGLGKAGK 520
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 149/341 (43%), Gaps = 15/341 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
SA++ ++ + +++ L +M + G + YN M+ + +G+ ++LQE L+
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SP+VVTYN + A + A + + E+ I P+ I+Y+++ + K + +
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M + C + +++L+ Y D+ + + +M N Y +I
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT----- 282
+G+ A ++ + S D N LL + +L+ A + +
Sbjct: 437 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 496
Query: 283 ------KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
G++P T+ +L G + +G+ + E +++ R VPD ++ + L
Sbjct: 497 DASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGL 554
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+Q +D A + V++ + + +N+L+ Y KAG++
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 151/374 (40%), Gaps = 51/374 (13%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
N F + DK P+ T + ++ + + + + A+ L+++M E + YN ++N
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ G+ + ++ E L + P+ +TYN + Q+ + AE F + PD
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++TL Y + + L EM +R N V Y++L+ + +G + L + +
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452
Query: 209 KMMS----------------------------LFAKM-------------NDAE-----Y 222
+M+S +F M N E Y
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I L+ G+F +AE +Y+E D + ++ +++L+ A + + +
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
K P T+ L GY K G+++ LE F + R V D + + G+I
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM--GRRGIVADAIIYITLIYGFRKVGNI 630
Query: 343 DGAEHLLVTLRNAG 356
+GA + + ++G
Sbjct: 631 NGALDIFQEMISSG 644
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 14/294 (4%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A E+ F + K PD T + L+ Y K+ + L+ +M G + + YN ++
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435
Query: 88 NLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ + G L+ + Q+ + PD+VT N L + A + F ++K+K+D
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495
Query: 147 -----------PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
PD ++Y+ L I +A +EM R + + YSS++
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
DE +++ M S N + +I+ K G + ++ E D
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ L+ + + A + +++ G+ P T + G+ K ++E+ +
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 669
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 112/281 (39%), Gaps = 4/281 (1%)
Query: 98 KVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+V + L + PDV+T+ + + A + + + PD I+Y T
Sbjct: 166 RVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVD 225
Query: 158 LYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
KM A L++ME+ + + N V YS+++ G + ++ +M
Sbjct: 226 GMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIF 285
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N Y C+I G + A+ + E + + N L+ A++ + A
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
Y+ ++ +GI P T+ + G+ K+ +++ + F + + + PD T +
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY--LMATKGCSPDVFTFTTLIDGY 403
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
ID LL + G V+ + YN+L+ + G +
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/246 (16%), Positives = 103/246 (41%), Gaps = 6/246 (2%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A F ++ +++ P I ++ L ++ME P+ + ++ME++ R + +++ L
Sbjct: 63 EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + + L + K+ L + +T ++ L +A +++ +
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D L+ ++ A + +R+V G++P T+ G K G L
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+K + + P+ + +A + L + G + +L + +++ G + YN ++
Sbjct: 239 LLRK-MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 370 YAKAGK 375
+ +G+
Sbjct: 298 FCISGR 303
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 149/341 (43%), Gaps = 15/341 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
SA++ ++ + +++ L +M + G + YN M+ + +G+ ++LQE L+
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SP+VVTYN + A + A + + E+ I P+ I+Y+++ + K + +
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M + C + +++L+ Y D+ + + +M N Y +I
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT----- 282
+G+ A ++ + S D N LL + +L+ A + +
Sbjct: 437 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 496
Query: 283 ------KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
G++P T+ +L G + +G+ + E +++ R VPD ++ + L
Sbjct: 497 DASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGL 554
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+Q +D A + V++ + + +N+L+ Y KAG++
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 151/374 (40%), Gaps = 51/374 (13%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
N F + DK P+ T + ++ + + + + A+ L+++M E + YN ++N
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ G+ + ++ E L + P+ +TYN + Q+ + AE F + PD
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++TL Y + + L EM +R N V Y++L+ + +G + L + +
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452
Query: 209 KMMS----------------------------LFAKM-------------NDAE-----Y 222
+M+S +F M N E Y
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I L+ G+F +AE +Y+E D + ++ +++L+ A + + +
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
K P T+ L GY K G+++ LE F + R V D + + G+I
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM--GRRGIVADAIIYITLIYGFRKVGNI 630
Query: 343 DGAEHLLVTLRNAG 356
+GA + + ++G
Sbjct: 631 NGALDIFQEMISSG 644
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 123/305 (40%), Gaps = 17/305 (5%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A E+ F + K PD T + L+ Y K+ + L+ +M G + + YN ++
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435
Query: 88 NLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ + G L+ + Q+ + PD+VT N L + A + F ++K+K+D
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495
Query: 147 -----------PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
PD ++Y+ L I +A +EM R + + YSS++
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
DE +++ M S N + +I+ K G + ++ E D
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLECF 312
+ L+ + + A + +++ G+ P T + G+ K ++E+ +LE
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Query: 313 KKAIG 317
+ ++G
Sbjct: 676 QMSVG 680
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 112/281 (39%), Gaps = 4/281 (1%)
Query: 98 KVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+V + L + PDV+T+ + + A + + + PD I+Y T
Sbjct: 166 RVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVD 225
Query: 158 LYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
KM A L++ME+ + + N V YS+++ G + ++ +M
Sbjct: 226 GMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIF 285
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
N Y C+I G + A+ + E + + N L+ A++ + A
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
Y+ ++ +GI P T+ + G+ K+ +++ + F + + + PD T +
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY--LMATKGCSPDVFTFTTLIDGY 403
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
ID LL + G V+ + YN+L+ + G +
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/246 (16%), Positives = 103/246 (41%), Gaps = 6/246 (2%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A F ++ +++ P I ++ L ++ME P+ + ++ME++ R + +++ L
Sbjct: 63 EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + + L + K+ L + +T ++ L +A +++ +
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D L+ ++ A + +R+V G++P T+ G K G L
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+K + + P+ + +A + L + G + +L + +++ G + YN ++
Sbjct: 239 LLRK-MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 370 YAKAGK 375
+ +G+
Sbjct: 298 FCISGR 303
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 166/386 (43%), Gaps = 14/386 (3%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV A + + FE PD++ T S ++ QN A ++ M + G
Sbjct: 281 RVGDALGYIQQEIADGFE--PDRV----TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEP 334
Query: 79 CPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
Y+ ++N +NG+L++ ++ Q + PD T+N + A ++N E A
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLA 394
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
EL + P+ +++ L + K+ P A +EM+ C + V Y+ L+ +
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G + L + K+M + Y +I L K E+AE ++D+ + ++G G +
Sbjct: 455 GKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD-VTGIGRNAIT 513
Query: 258 -NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
N L+ N +++ A ++++++G++P T+ + Y K+G + K + +
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM- 572
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKA-- 373
+ + D N L + A LL +R G T + YN ++++ +
Sbjct: 573 -TANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNN 631
Query: 374 GKMPLIIVERMQKDNVQMDAETQKVL 399
G+ L + M + DA T K++
Sbjct: 632 GRDALSLFREMTEVGGPPDAFTYKIV 657
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 158/387 (40%), Gaps = 12/387 (3%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A Q R E + PD T + L+ +V+ A L +MSE G
Sbjct: 205 ALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264
Query: 79 CPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ N ++N Y G++ D + + QE+ PD VT++ ++ + A K
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL 324
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+ + +PD +YST+ + E+A + +M C + +++L+
Sbjct: 325 GLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE 384
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+E L + +++ N + +I++L K+G+ A +++E +S T D
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTY 444
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--A 315
NIL+ + +L A + G T+ + G K+ ++E+ E F +
Sbjct: 445 NILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDV 504
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
G R + + LI N ID A L+ + + G + YNS+L Y K G
Sbjct: 505 TGIGRNAITFNTLIDGLCNAER----IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQG 560
Query: 375 KM--PLIIVERMQKDNVQMDAETQKVL 399
+ I++ M + ++D T L
Sbjct: 561 NISKAADILQTMTANGFEVDVVTYATL 587
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 123/296 (41%), Gaps = 4/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YNH+L + ++ + E+ + PDVVT+N + A TA E+
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ PD +++TL +++ E A M + C V + L++ Y +G
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L ++ ++ + + ++ ++ L + G + A + D + ++
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
N +LE A+ N++V G P TT+ L + Q+E+ L+ ++ +V+
Sbjct: 344 NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL--TVKG 401
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
P+ N L + GD A L ++++G E+ YN L+ +GK+
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QE 105
T + ++ + ++ EAE + ++M G + + +N +++ + ++D +++ Q
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + P+ VTYN L Q + A + + D ++Y+TL + K
Sbjct: 538 ISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRT 597
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLL-SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ A L+ M + + AY+ ++ SL+ +D L ++++M + + Y
Sbjct: 598 QAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRD-ALSLFREMTEVGGPPDAFTYKI 656
Query: 225 VISSLVKLG 233
V L + G
Sbjct: 657 VFRGLCRGG 665
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 157/344 (45%), Gaps = 24/344 (6%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + ++S++A L+E+M E G + +N ++ GQL++
Sbjct: 348 PDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR 407
Query: 103 LQEL-KKNTSPDVVTYNLWL-AACASQNDKETAEKAFL---ELKKTKIDPDWISYSTLTS 157
L+ + ++ +PDV+TYN + A+C + N KAF+ E+ ++ + D + +TL
Sbjct: 408 LEMMTEEGLTPDVITYNTLIDASCKAGN----VAKAFVLMDEMVRSGLKMDTFTLNTLLY 463
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K + E+A L+ +R + V+Y ++++ Y + L +W +M+
Sbjct: 464 NLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTP 523
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ + Y +I L +G+ +A + +E + D NI++ AY LE A F+
Sbjct: 524 SISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFH 583
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI-TAAYNKL 336
N++V KP T L G G++EK ++ F+ WV + + YN L
Sbjct: 584 NKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFE-------SWVEKGKKVDVITYNTL 636
Query: 337 EE----QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
+ D+D A + G YN LL ++AG+
Sbjct: 637 IQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGR 680
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+ T+NL + S+ A +++ + PD ++Y+TL + + + + +A T
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L M+K R Y++L+S Y +G+ + + + M + + + Y + + L +
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ 326
Query: 232 LGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G+ ++A + DE E + G P V N L+ A + A + + KG+K
Sbjct: 327 AGKVDEAFKLKDEMEQL-GIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSL 385
Query: 290 TTWELLTWGYLKKGQMEKVL 309
T ++ G ++GQ+E+ L
Sbjct: 386 VTHNIIVKGLCREGQLEEAL 405
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 155/429 (36%), Gaps = 58/429 (13%)
Query: 4 RRPHGAQVRAQSYRQR----------------VAQAQALQTRARENFFENLPDKMRGPD- 46
R PH A S+R+R +A++ + +A + F +L P+
Sbjct: 150 RLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNH 209
Query: 47 -TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + L+H++ A+A + + KM G + YN +LN + G L + +L
Sbjct: 210 YTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLAR 269
Query: 106 LKK----------NT--------------------------SPDVVTYNLWLAACASQND 129
+KK NT PD+ TYN+ A
Sbjct: 270 MKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 329
Query: 130 KETAEKAFLELKKTKI-DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYS 188
+ A K E+++ I PD ++Y+TL K + A L+EM ++ + + V ++
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHN 389
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
++ G +E L + M + Y +I + K G KA + DE
Sbjct: 390 IIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRS 449
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D N LL + E AE +G P ++ + Y K+ + E
Sbjct: 450 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLL 367
L + + I RK P L G + A L L G V + YN ++
Sbjct: 510 LCLWDEMIK--RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567
Query: 368 RTYAKAGKM 376
Y K G +
Sbjct: 568 HAYCKEGDL 576
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 122/308 (39%), Gaps = 12/308 (3%)
Query: 101 QMLQELKKN--TSPDVVTYNLWLAACA--SQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
Q+L ++ P + N L+A A + + AF L ++ P+ +++ L
Sbjct: 157 QLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLV 216
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ A +TL +M+ + V Y++LL+ + G E + +M
Sbjct: 217 HTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIV 276
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
A Y ++S+ +LG ++A ++ + + D N+L A +++ A
Sbjct: 277 PTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 336
Query: 277 YNRLVTKGI-KPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYN 334
+ + GI P T+ L K + L ++ V+ + H +I
Sbjct: 337 KDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG-- 394
Query: 335 KLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQM 391
L +G ++ A L + G I YN+L+ KAG + ++++ M + ++M
Sbjct: 395 -LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM 453
Query: 392 DAETQKVL 399
D T L
Sbjct: 454 DTFTLNTL 461
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 15/253 (5%)
Query: 157 SLYIKMELPEKAATTLKEMEKRTC-RKNRVAYSSLLSLY--TNMGYKDEVLRIWKKMMSL 213
S Y ++ LP AA L +R C R + A +++LS + L + +++L
Sbjct: 144 STYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIAL 203
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
N + ++ + G A + + + + D N LL A+ + L A
Sbjct: 204 RLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 263
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ R+ +GI P T+ L Y + G Q V+E A G + PD
Sbjct: 264 RTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAM-TAFG----FEPDLWTYN 318
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQK 386
L + G +D A L + G VS ++ YN+L+ K + L ++E M++
Sbjct: 319 VLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMRE 378
Query: 387 DNVQMDAETQKVL 399
V+ T ++
Sbjct: 379 KGVKSSLVTHNII 391
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 170/385 (44%), Gaps = 30/385 (7%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISNGQLDK 98
PD S L + + + K E M M LKC P Y+ ++++ +G+L
Sbjct: 127 PDIVSFNTLFNGFSKMKMLDEVFVYMGVM-----LKCCSPNVVTYSTWIDMFCKSGELKL 181
Query: 99 VPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ +K++ P+VVT+ + D E + E+++ ++ + ++Y+ L
Sbjct: 182 ALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALID 241
Query: 158 LYIKM-ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ K E+ L+ +E R N + Y+++++ + G D ++ KM++ +
Sbjct: 242 GFCKKGEMQRAGGMYLRMLEDRV-EPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ Y +IS L +G+ ++A I ++ E D + ++ AY +++ A +
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNM 360
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE--CFKKAIGSVRKWVPDHRLITAAYN 334
Y++L+ +G +P + G K GQ+ + + C +KA + + T +
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKA---------NDVMYTVLID 411
Query: 335 KLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLIIVERMQKDNVQM 391
L ++ D E L + AG V + +Y S + K G + + +M ++ +++
Sbjct: 412 ALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLEL 471
Query: 392 D--AETQKVLKITSEMPVSEVSSIF 414
D A T + +TS+ + E +F
Sbjct: 472 DLFAYTTLIYGLTSKGLMVEARQVF 496
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 127/311 (40%), Gaps = 8/311 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T +AL+ + + + A + +M E L Y ++N + G D + L +
Sbjct: 235 TYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKM 294
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + D+ Y + ++ + A + +++K + PD + ++T+ + Y K
Sbjct: 295 LNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRM 354
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A ++ +R + VA S+++ G E + + K ND YT +
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCT-----EKANDVMYTVL 409
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I +L K +F + E ++ + D + +A + L A ++V +G+
Sbjct: 410 IDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGL 469
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + L +G KG M + + F + + S PD + E++G++ A
Sbjct: 470 ELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRS--GVCPDSAVFDLLIRAYEKEGNMTTA 527
Query: 346 EHLLVTLRNAG 356
LL+ ++ G
Sbjct: 528 SDLLLDMQTRG 538
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 6/227 (2%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
K EA ++E M + + + + M+N Y +G++ M +L ++ PDVV +
Sbjct: 318 KLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ A A F K + Y+ L K E + ++ +
Sbjct: 378 TMIDGIAKNGQLHEAISYFCTEKANDV-----MYTVLIDALCKEEDFIEVERLFSKISEA 432
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
++ Y+S ++ G + ++ KM+ +++ YT +I L G +A
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEA 492
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++DE D V ++L+ AY + A + T+G+
Sbjct: 493 RQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGL 539
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 140/312 (44%), Gaps = 16/312 (5%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALM 68
+RA R V A A+ F+++ + P T S LL + + +A L+
Sbjct: 167 IRALCVRGCVLDALAV--------FDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLL 218
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQ 127
++M G + YN ++N S G + + ++L L PD VTY L + S
Sbjct: 219 DEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSS 278
Query: 128 NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
E A+K ++ PD ++++ + + + +A L +M + C + + Y
Sbjct: 279 ERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITY 338
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN----DAEYTCVISSLVKLGEFEKAENIYD 243
SS++ DE +++ K++++ N + +I+SL + G F++A + D
Sbjct: 339 SSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVD 398
Query: 244 EWESISGTGDPRVPNILLAAYINRN-QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E D N ++ ++ ++ + E A N +V+ G+ P TT++ L +G ++
Sbjct: 399 EMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSRE 458
Query: 303 GQMEKVLECFKK 314
+ME+ + F++
Sbjct: 459 DEMERAIGMFRR 470
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 136/326 (41%), Gaps = 8/326 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C+ L+ + + A+AE ++E + + + YN M+N Y G +D +M+ +
Sbjct: 99 CNILIKKLCADGRVADAERVVEALGPSATI---ITYNTMVNGYCRAGNIDAARRMIDSVP 155
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+PD TYN + A + A F ++ P ++YS L K ++
Sbjct: 156 --FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQ 213
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + C + V Y+ L++ + G E L++ + S K + YT V+
Sbjct: 214 AVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLK 273
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
SL +E+A+ + + S D N ++ + + + A ++ G P
Sbjct: 274 SLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTP 333
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSV--RKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ + G K+ ++++ ++ K+ + + + +PD L ++G D A
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRA 393
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTY 370
++ + G + YN ++ +
Sbjct: 394 IKVVDEMSEHGCIPDITTYNCIVDGF 419
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 19/293 (6%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
D+VTYN L+ACA + + AE F + + I PD +YS L + K+ EK + L
Sbjct: 9 DIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELL 68
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
KEME + +Y+ LL + G E + ++++M N A Y+ +++ +
Sbjct: 69 KEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRH 128
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
G ++ +++ E + + + NIL+ + + + ++ +V + ++P T+
Sbjct: 129 GRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETY 188
Query: 293 ELLTWGYLKKGQMEK----VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
E L + K G E +L +K + VP + T +E G E
Sbjct: 189 EGLIFACGKGGLHEDAKKILLHMNEKGV------VPSSKAYTGV---IEAYGQAALYEEA 239
Query: 349 LVTLRNAGHVST----EIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAET 395
LV V + E YNSL++ +AK G K I+ +M + V + +T
Sbjct: 240 LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDT 292
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 1/258 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + + EAE + M+E G L Y++++ + +L+KV ++L+E+
Sbjct: 12 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 71
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ S PD+ +YN+ L A A + A F +++ P+ +YS L +LY +
Sbjct: 72 ESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRY 131
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ EM+ N Y+ L++++ GY EV+ ++ M+ + N Y +
Sbjct: 132 DDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGL 191
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + K G E A+ I + ++ AY E A +N + G
Sbjct: 192 IFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGS 251
Query: 286 KPCYTTWELLTWGYLKKG 303
KP T+ L + K G
Sbjct: 252 KPTVETYNSLIQMFAKGG 269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 109/286 (38%), Gaps = 41/286 (14%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S LL ++ Q+ EA + +M G + Y+ +LNLY +G+ D V +
Sbjct: 78 PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDL 137
Query: 103 LQELK-KNTSPDVVTYNLWLA-----------------------------------ACAS 126
E+K NT P+ TYN+ + AC
Sbjct: 138 FLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGK 197
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
E A+K L + + + P +Y+ + Y + L E+A M + +
Sbjct: 198 GGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVET 257
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+SL+ ++ G E I KM N + VI + + G+FE+A Y E E
Sbjct: 258 YNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEME 317
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP---CY 289
D + +L+ Y +E +E + + GI P CY
Sbjct: 318 KARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCY 363
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD TCS++L+ + ++ K EA L +M E G + Y ++N L+ S ++
Sbjct: 8 PDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNL 67
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q + + S D+VT + + AE+ F + K + P+ ++YS L Y K
Sbjct: 68 QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 127
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E A L++MEK N + +SS+++ Y G + + + ++M+ N
Sbjct: 128 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 187
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I K GE + A++ E +S + +ILL +++ A S +
Sbjct: 188 YAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMY 247
Query: 282 TKGIKPCYTTWELLTWGYLKKGQ 304
+KGI P + L GY K+G
Sbjct: 248 SKGIDPDIVNYASLIDGYFKEGN 270
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 153/353 (43%), Gaps = 30/353 (8%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
LL++ + + EA +L+ M G + Y +++ Y G ++QE+K KN
Sbjct: 226 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 285
Query: 110 TSPDVVTYNLWLAAC--------------------ASQNDKETAEKAFLELKKTKIDPDW 149
DVV YN + A E A E+K I P+
Sbjct: 286 IRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNA 345
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+ L K EKA + L EM + + L+ Y+ D++L+I +K
Sbjct: 346 VTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEK 405
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+++ +++ Y +I+ +LG KA+ + DE + D N L+ Y +
Sbjct: 406 LVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSH 465
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV--RKWVPD-- 325
+E A Y+++ GI P TT+ L G G ME+++E +K + + R VP+
Sbjct: 466 VEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAA 525
Query: 326 -HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
+ ++ + Y ++ G+ L + + G V T + YN L+ YAK+GKM
Sbjct: 526 TYDILVSGYGRV---GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKM 575
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 17/291 (5%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PDVVT + L A F E+ + +DP+ +SY+T+ + K +A
Sbjct: 8 PDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNL 67
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+M R + V ++++ +G E +++ ++ L N Y+ ++ K
Sbjct: 68 QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 127
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIK 286
LG+ E AE + + E + PN+ ++ Y + L A +V + +
Sbjct: 128 LGKMELAELVLQKMEK-----EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVM 182
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + +L GY K G+ + V + F K + S R+ + + N L+ G +D A
Sbjct: 183 PNTIVYAILIDGYFKAGE-QDVADDFCKEMKS-RRLEESNVIFDILLNNLKRVGRMDEAR 240
Query: 347 HLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDA 393
L++ + + G + +I Y SL+ Y K G L IV+ M++ N++ D
Sbjct: 241 SLIIDMYSKG-IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV 290
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 5/259 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + +AE+ +++M F+ P+ + ++ Y + + DK+ Q+ ++L
Sbjct: 347 TYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKL 406
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ YN + A+ E+ K I D ++Y+ L Y
Sbjct: 407 VASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHV 466
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM----NDAE 221
EKA T +M N Y++LL +N G +E++ +K++S + N A
Sbjct: 467 EKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAAT 526
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y ++S ++G +K ++ E + + N+L++ Y ++ A N L+
Sbjct: 527 YDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLL 586
Query: 282 TKGIKPCYTTWELLTWGYL 300
TKG P T+++LT G+L
Sbjct: 587 TKGRIPNSFTYDILTCGWL 605
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 8/299 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ SY ++ + EAE L +M G +N +++ Y Q D + ++L E++
Sbjct: 85 NTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQD 144
Query: 109 -NTSPDVVTYNLWLAACASQND-KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+P+ +Y ++A Q + A AFL +KK I P SY+ L Y E
Sbjct: 145 AGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSYTALIHAYSVSGWHE 204
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA T + M++ + + Y++LL + G ++ IWK MM + + ++
Sbjct: 205 KAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMREKVEGTRVTFNILL 264
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
K G + +A ++ +E++ N+L+ AY Q + T ++
Sbjct: 265 DGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLKLE 324
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + + Y++ + K + S + VPD + +Y KL D+ A
Sbjct: 325 PDSITYTTMIYAYVRVRDFRRAFFYHKMMVKSGK--VPDAK----SYQKLRAILDVKAA 377
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I S G ++A I E E + + + N L+ +Y NQ+E AE Y+ + K
Sbjct: 51 ALIKSFCDEGLKKEALIIQTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAK 110
Query: 284 GIKPCYTTWELLTWGYLKKGQ---MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
G+KP T+ +L Y ++ Q +EK+L + A + + + +AY + ++
Sbjct: 111 GLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQDA--GLAPNAKSYTCLISAYGRQKKMS 168
Query: 341 DIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQK 397
D+ A + ++ AG T Y +L+ Y+ +G + I E MQ++ ++ ET
Sbjct: 169 DM--AADAFLRMKKAGIKPTSYSYTALIHAYSVSGWHEKAYITFENMQREGIKPSIETYT 226
Query: 398 VL 399
L
Sbjct: 227 TL 228
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 15/253 (5%)
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+++ I + I Y+TL Y K E+A EM+ + + ++ L+ Y+
Sbjct: 71 EMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRM 130
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI-YDEWESISGTGDPRVP 257
D + ++ +M N YTC+IS+ G +K ++ D + + G
Sbjct: 131 QPDIIEKLLLEMQDAGLAPNAKSYTCLISA---YGRQKKMSDMAADAFLRMKKAGIKPTS 187
Query: 258 ---NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
L+ AY E A + + +GIKP T+ L + + G + +++ +K
Sbjct: 188 YSYTALIHAYSVSGWHEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKL 247
Query: 315 AIGSVRKWVPDHRL-ITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
+ R+ V R+ + +QG A ++ + G H + YN L+ YA+
Sbjct: 248 MM---REKVEGTRVTFNILLDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYAR 304
Query: 373 AG---KMPLIIVE 382
G K+P ++ E
Sbjct: 305 GGQDSKLPQLLKE 317
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + + EA ++ + + G + YN ++N Y GQ K+PQ+L+E+
Sbjct: 259 TFNILLDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEM 318
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
PD +TY + A D A + K+ PD SY L ++
Sbjct: 319 ATLKLEPDSITYTTMIYAYVRVRDFRRAFFYHKMMVKSGKVPDAKSYQKLRAI 371
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 13/305 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H K EA ++++M E G + YN ++ + + G+++ ++ +E+
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ PD+ TYN L + + A K + E K + + + +Y + Y K
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E E+ + N + Y+ ++ + G L++ + M S N A Y+ +
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I + +G E A+++ DE + VPN+ L+ Y Q++ AES + +
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRK-----EGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
++ I P T+ ++ GY K G MEK K S VPD N +
Sbjct: 725 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES--GIVPDVVTYNVLTNGFCKAN 782
Query: 341 DIDGA 345
D+D A
Sbjct: 783 DMDNA 787
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 5/259 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL K +A L ++ G + Y M+ Y +++ V +
Sbjct: 556 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 615
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYI 160
EL K + + YN+ + A QN A LE K+K I P+ +YS+L
Sbjct: 616 FNELLSKKMELNSIVYNIIIKA-HCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ L E A + EM K N V Y++L+ Y +G D W +M+S N
Sbjct: 675 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 734
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
YT +I KLG EKA N+ + + D N+L + N ++ A +++
Sbjct: 735 TYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 794
Query: 281 VTKGIKPCYTTWELLTWGY 299
T+G+ T+ L G+
Sbjct: 795 ATEGLPVDEITYTTLVHGW 813
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ + K L E+M++ G YN +L + G+LD ++ E
Sbjct: 525 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 584
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K ++ TY + + N E E F EL K++ + I Y+ + + +
Sbjct: 585 KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 644
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L+ M+ + N YSSL+ N+G ++ + +M N YT +
Sbjct: 645 AAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 704
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I KLG+ + AE+ + E S + + +++ Y +E A + ++ GI
Sbjct: 705 IGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 764
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
P T+ +LT G+ K M+ +
Sbjct: 765 VPDVVTYNVLTNGFCKANDMDNAFK 789
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 1/220 (0%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+K T P + T N L++ N+ E + F + + PD S++ + + K E
Sbjct: 202 RKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKME 260
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A +MEK N V Y+ +++ G D + +KM + N Y +I
Sbjct: 261 NAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALI 320
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ L+KL F+K ++ DE + V N L+ Y +E A + +++K I
Sbjct: 321 NGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNIT 380
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
P T L G+ K Q+E ++ + S PD+
Sbjct: 381 PTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 138/323 (42%), Gaps = 13/323 (4%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
N +L+ + + +K ++ + + + PDV ++ + A E A + F++++K
Sbjct: 213 NFLLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKL 272
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
I P+ ++Y+ + + + + A ++M + + N Y +L++ + + D+V
Sbjct: 273 GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKV 332
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ +M+ N + +I K+G E A I D S + T L+
Sbjct: 333 NHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQG 392
Query: 264 YINRNQLEMAESFYNRLVTKG--IKP--CYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ +Q+E AE+ +++ G I P CY+ L KK + F K + S
Sbjct: 393 FCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC----KKFRYHSAFR-FTKMMLS- 446
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY-NSLLRTYAKAGKMPL 378
R + P L+T L + G A L L G ++++ N+L+ AGK+P
Sbjct: 447 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPE 506
Query: 379 I--IVERMQKDNVQMDAETQKVL 399
IV+ M + + MD T L
Sbjct: 507 ASRIVKEMLERGLPMDRITYNAL 529
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 133/347 (38%), Gaps = 34/347 (9%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + +++ QN + A L EKM+ G Y ++N I DKV +L E
Sbjct: 280 TYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEM 339
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ +P+VV +N + + E A K + I P ++ +L + K +
Sbjct: 340 IGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQI 399
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK-----------DEVLRIWKKMMSLF 214
E A L+E+ SS LS++ + Y R K M+S
Sbjct: 400 EHAENALEEI-----------LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 448
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR---VPNILLAAYINRNQLE 271
+ +D T ++ L K G+ +A + W + G P N L+ +L
Sbjct: 449 FRPSDLLLTMLVCGLCKDGKHLEATEL---WFRLLEKGSPASKVTSNALIHGLCGAGKLP 505
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLIT 330
A ++ +G+ T+ L G+ +G++E CF+ ++ + PD
Sbjct: 506 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG---CFRLREEMTKRGIQPDIYTYN 562
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
L G +D A L + +G +S Y ++ Y KA ++
Sbjct: 563 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 134/303 (44%), Gaps = 25/303 (8%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T SAL+++ + K A L ++M + G + + + +++ + NG++D + +
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q+ L K PD+V YN + D A + + + PD I+Y+TL + +
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E A KEM++ +RV +S+L+ G + R ++M+ K +D
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-----NILLAAYINRNQLEMAESF 276
YT ++ + K G+ + + E +S D VP N+LL Q++ A+
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQS-----DGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 277 YNRLVTKGIKPCYTTWELLTWG----------YLKKGQMEKV--LECFKKAIGSVRKWVP 324
+ ++ G+ P T+ L G Y++K ++ V L +K + + +
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRASK 602
Query: 325 DHR 327
DHR
Sbjct: 603 DHR 605
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 137/331 (41%), Gaps = 4/331 (1%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
C LL ++ + ++ + GF +N ++N + G + ++ E+
Sbjct: 208 CGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K++ P VV++N + + + + +++K++ PD +YS L + K +
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A EM KR N V +++L+ ++ G D + ++KM+S + + Y ++
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ K G+ A NI D D L+ + +E A + GI+
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+ L G K+G++ ++ + + K PD T + ++GD
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK--PDDVTYTMMMDAFCKKGDAQTGF 505
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
LL +++ GHV + + YN LL K G+M
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 128/277 (46%), Gaps = 9/277 (3%)
Query: 44 GPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
P+ S AL+ +Y + ++ AEA+ +M G L Y ML ++ + + +
Sbjct: 170 APNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEE 229
Query: 102 MLQEL----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ L K PD +++ + + E A K F E+ + ++Y++L S
Sbjct: 230 LFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMS 289
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ + + +M++ + + V+Y+ L+S Y ++E L ++++M+ +
Sbjct: 290 FETNYK---EVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRP 346
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
Y ++ + G E+A+ ++ + + D +L+AY+N + +E AE+F+
Sbjct: 347 THKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFF 406
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
RL G +P T+ L GY K +EK+++ +++
Sbjct: 407 RRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEE 443
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 113/263 (42%), Gaps = 11/263 (4%)
Query: 32 ENFFENLPDKMR---GPDTCSALLHSYVQNKKSA----EAEALMEKMSECGFLKCPLPYN 84
E F++L +K + PD + H + K A +A + +M+ G + + YN
Sbjct: 228 EELFDSLLNKEKPVLKPD--QKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYN 285
Query: 85 HMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
+++ + ++ K+ +Q + PDVV+Y L ++A +E A F E+
Sbjct: 286 SLMSFETNYKEVSKIYDQMQ--RAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAG 343
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
I P +Y+ L + + E+A K M++ C + +Y+++LS Y N +
Sbjct: 344 IRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAE 403
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
++++ + N Y +I K+ EK Y+E + + + ++ AY
Sbjct: 404 NFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAY 463
Query: 265 INRNQLEMAESFYNRLVTKGIKP 287
A ++N + + G++P
Sbjct: 464 GKNKDFGSAVIWFNEIESCGLRP 486
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNT 110
L S+ N K E + ++M G + Y +++ Y + ++ + +E L
Sbjct: 287 LMSFETNYK--EVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGI 344
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
P YN+ L A A E A+ F +K+ + PD SY+T+ S Y+ E A
Sbjct: 345 RPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAEN 404
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ +++ R N V Y +L+ Y + +++++ +++M ++N T ++ +
Sbjct: 405 FFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYG 464
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
K +F A ++E ES D + NILL+
Sbjct: 465 KNKDFGSAVIWFNEIESCGLRPDQKAKNILLS 496
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 85/188 (45%), Gaps = 9/188 (4%)
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
++ ++ +I++ KLG+F +AE + + + L+ AY + AE+
Sbjct: 136 FSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAI 195
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNK 335
+ R+ + G +P T++++ +++ + ++ E F + + + PD ++
Sbjct: 196 FRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYM 255
Query: 336 LEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLR---TYAKAGKMPLIIVERMQKDNVQM 391
++ G+ + A + + G T + YNSL+ Y + K I ++MQ+ +Q
Sbjct: 256 FKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSK----IYDQMQRAGLQP 311
Query: 392 DAETQKVL 399
D + +L
Sbjct: 312 DVVSYALL 319
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 147/360 (40%), Gaps = 38/360 (10%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F +P K PD T S L++ + ++ EA L+++M G L P+ +N +++
Sbjct: 197 FREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSK 256
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
NG L + +++ + K P+ VTYN + + + A ++ +K P+ ++
Sbjct: 257 NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 316
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y T+ + +K E L ME+R + N YSSL+S G + +R+WK+M
Sbjct: 317 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 376
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES----------------ISGTGDPR 255
K N Y I L + + ++AE+I E S GD +
Sbjct: 377 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 436
Query: 256 -------------------VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
++LL +L A + + ++ +G+KP + +
Sbjct: 437 KAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMI 496
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
G G ++K L+ F + K PD +N L Q ++ A LL ++ + G
Sbjct: 497 KGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 556
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 3/244 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++ V+ +++ + ++ M E G Y+ +++ G+ + ++ +E+
Sbjct: 316 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 375
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P+VV Y ++ + AE E+ P+ +YS+L + K
Sbjct: 376 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 435
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA KEM + R N V S LL+ G E L +W M+ K + Y+ +
Sbjct: 436 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSM 495
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTK 283
I L +G +K ++ E + P V NIL A ++ L A N ++ +
Sbjct: 496 IKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 555
Query: 284 GIKP 287
G P
Sbjct: 556 GCDP 559
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 127/313 (40%), Gaps = 10/313 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL----KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+N +LN+ I G + + K P+++TYNL + A + A F
Sbjct: 139 FNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFR 198
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ +PD +YSTL + K ++A L EM+ C N V ++ L+ + G
Sbjct: 199 EMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 258
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
++ M N+ Y +I L G+ +KA ++ ++ S +
Sbjct: 259 DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYG 318
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
++ + + + E + +G K + L G K+G+ E + +K+ +
Sbjct: 319 TIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM--A 376
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--- 374
+ P+ + A + L D AE +L + + G + Y+SL++ + K G
Sbjct: 377 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 436
Query: 375 KMPLIIVERMQKD 387
K L+ E M +D
Sbjct: 437 KAILVWKEMMSQD 449
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
CS LL+ ++ + EA + M G + Y+ M+ G +DK ++ E++
Sbjct: 457 CSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQ 516
Query: 108 ---KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST-LTSLYIKME 163
+ PDVVTYN+ A Q++ A + DPD ++ + L +L ++
Sbjct: 517 CQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERIN 576
Query: 164 LPEKAATTLKEMEKRTCRKNR 184
P+ L E+ R ++ R
Sbjct: 577 PPQDGRLFLDELVVRLLKRER 597
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 138/303 (45%), Gaps = 16/303 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + I GQ +KV ++ E+ + + PD VTY+ ++A +++A + E+
Sbjct: 197 YNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEM 256
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+ + SL+ K++ A + +EM CR + Y+ L+ G
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRI 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-- 258
DE + +M K + +I+ L K G + +++E +S +PN
Sbjct: 317 DEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM-GVSHC----IPNVV 371
Query: 259 ----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
I+ A + +++++ S++ R+ GI P T+ +L G+ K ++EK + ++
Sbjct: 372 TYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEE 431
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKA 373
+ + P + + L + D A L L+ N G S +Y +++ KA
Sbjct: 432 M--DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKA 489
Query: 374 GKM 376
G++
Sbjct: 490 GRL 492
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 5/293 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LK 141
N+M+N G+LD ++ +E+ + P+VVTYN + A + + ++ E +K
Sbjct: 339 NNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMK 398
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P +YS L + K EKA L+EM+++ AY SL+ D
Sbjct: 399 GSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 458
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++++ + Y +I L K G + A N++DE + T + N L+
Sbjct: 459 LACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALM 518
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ L+ A + ++ G P ++ ++ G K G + +E S K
Sbjct: 519 SGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIK 578
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
PD + L G + A L+ + G I Y+S+L K
Sbjct: 579 --PDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 40 DKMRG------PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
++M+G P T S L+ + + + +A L+E+M E GF CP Y +++
Sbjct: 395 ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454
Query: 94 GQLDKVPQMLQELKKNT------------------------------------SPDVVTY 117
+ D ++ QELK+N +P+V Y
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAY 514
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
N ++ A + A ++++ PD SY+ + + K P +A L M+
Sbjct: 515 NALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKN 574
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
T + + V+Y+++LS ++ G +E + K+M +L + + Y+ ++ ++ K+ +
Sbjct: 575 STIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/205 (18%), Positives = 92/205 (44%), Gaps = 4/205 (1%)
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS-LFAKMNDAEYTCV 225
KA T +++ R C+ AY+S++ + + G ++V ++ +M + + + Y+ +
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSAL 236
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ KLG + A + +E + ++ ++++ + + + A S + +
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC 296
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P T+ L G K G++++ + + K PD ++ N L + G +D
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCK--PDTVVMNNMINFLGKAGRLDDG 354
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRT 369
L + + + + YN++++
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKA 379
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 158/367 (43%), Gaps = 21/367 (5%)
Query: 25 ALQTRARENFF--ENLPDKMR---------GPDTCS--ALLHSYVQNKKSAEAEALMEKM 71
L T+ + FF NL MR PD S A++ + + + A + ++M
Sbjct: 98 VLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRM 157
Query: 72 SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDK 130
GF + YN M+ S G+L+ +++ EL K P V+TY + + A +
Sbjct: 158 RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRI 217
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A + F EL + PD +Y+ + K + ++A ++ + R C + V+Y+ L
Sbjct: 218 NEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNIL 277
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
L + N ++ R+ K M+ + N ++ +ISS + G +A N+ + +
Sbjct: 278 LRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGL 337
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
T D + L++A+ +L++A + ++V+ G P + + K G + L+
Sbjct: 338 TPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALD 397
Query: 311 CFKKA--IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
F+K +G P R ++ L G+ A ++ + G EI YNSL+
Sbjct: 398 VFEKLDEVGC----PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLI 453
Query: 368 RTYAKAG 374
+ G
Sbjct: 454 SCLCRDG 460
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 152/342 (44%), Gaps = 11/342 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL+ + K E+ +E + GF + ++ + ++ L K ++++ L+
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV +YN ++ + N ++A + F ++ PD ++Y+ + E A
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ E+ K C+ + + Y+ L+ G +E L ++ +++S + + Y +I +
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G ++A + + D NILL +++N+++ E E +V G +P
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 291 TWELLTWGYLKKGQMEK---VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T +L + ++G++ + VLE K+ + PD + ++G +D A
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKE-----KGLTPDSYSYDPLISAFCKEGRLDLAIE 362
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLIIVERMQK 386
L + + G + + YN++L T K G + L + E++ +
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDE 404
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + + EA L +++ G YN ++ G D+ ++ L
Sbjct: 203 TYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL 262
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ +PDVV+YN+ L + +++ E E+ ++ + +P+ +++S L S + +
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRV 322
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L+ M+++ + +Y L+S + G D + +KM+S + Y +
Sbjct: 323 REAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTI 382
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++L K G + A +++++ + + R N + +A + A + ++ KGI
Sbjct: 383 LATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGI 442
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ L + G +++ +
Sbjct: 443 DPDEITYNSLISCLCRDGLVDEAI 466
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 129/290 (44%), Gaps = 4/290 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+ ++ RA + F +L + PD S LL S++ + + E LM+ M G +
Sbjct: 249 EGMEDRALD-FVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
++ +++ + G++ + +L+ +K K +PD +Y+ ++A + + A + ++
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
PD ++Y+T+ + K + A +++++ C AY+++ S + G K
Sbjct: 368 VSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK 427
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+ L + +M+ ++ Y +IS L + G ++A + + E+ NI+
Sbjct: 428 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIV 487
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
L +++ +V KG P T++ LL G G + +E
Sbjct: 488 LLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAME 537
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 1/155 (0%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACA 125
+ EK+ E G YN M + S G K +M+ E ++K PD +TYN ++
Sbjct: 398 VFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLC 457
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A ++++ T+ P IS++ + K + L M ++ C N
Sbjct: 458 RDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNET 517
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+Y L+ G++ E + + + L D+
Sbjct: 518 SYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDS 552
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 164/404 (40%), Gaps = 23/404 (5%)
Query: 11 VRAQSYRQRVAQAQALQTRARE-NFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALME 69
+R ++ +A+++ RE + N+ T + L+ Y + + +A L +
Sbjct: 224 IRGLCSDNKIEEAESMHRAMREVGVYPNVY-------TYNTLMDGYCKLANAKQALRLYQ 276
Query: 70 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQN 128
M G + + + +++ G++ + + K + +P++ YN + A
Sbjct: 277 DMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVG 336
Query: 129 DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYS 188
D A FLEL++ ++ PD +YS L + E+A ++M K N V Y+
Sbjct: 337 DVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYN 396
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
SL+ G D+ L I +M + N ++ +I K+ + A IY E
Sbjct: 397 SLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIK 456
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP-CYTTWELLTWGYLKKGQMEK 307
S + D ++ + ++ A Y+ ++ GI P CYT LL G K G++
Sbjct: 457 SLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLD-GLCKDGKISD 515
Query: 308 VLECFKKAI-----------GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
LE F + I G + + +H TA + L + G A L +R G
Sbjct: 516 ALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYG 575
Query: 357 HVSTE-IYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
E IY +LR + + +++ M K V ++ +L
Sbjct: 576 LQPDEVIYVVMLRGLFQVKYILMMLHADMLKFGVIPNSAVHVIL 619
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 115/264 (43%), Gaps = 1/264 (0%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C+ LL+ V+ + + E+M G + + +++ G L + +M E++
Sbjct: 150 CNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMR 209
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K P V+ Y + + S N E AE +++ + P+ +Y+TL Y K+ +
Sbjct: 210 VKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAK 269
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A ++M + V + L+ G ++ M+ N A Y +I
Sbjct: 270 QALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ K+G+ +A ++ E E + D +IL+ + ++ E A + + ++ +GI
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389
Query: 287 PCYTTWELLTWGYLKKGQMEKVLE 310
T+ L G K+G+M+K LE
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALE 413
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 12/280 (4%)
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
LK +K P+ Y L + KMEL E+A L K A + LL + G
Sbjct: 108 LKSSKFTPNV--YGELIIVLCKMELVEEA---LSMYHKVGAALTIQACNVLLYVLVKTGR 162
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + RI+++M+S + + +I + G+ +A+ ++DE V I
Sbjct: 163 FELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTI 222
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L+ + N++E AES + + G+ P T+ L GY K ++ L ++ +G
Sbjct: 223 LIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLG-- 280
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT-LRNAGHVSTEIYNSLLRTYAKAGKM-- 376
VPD + L + G++ A +L V ++ + + +YNSL+ Y K G +
Sbjct: 281 EGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSE 340
Query: 377 PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
+ + +++ V D T +L + S E +IF
Sbjct: 341 AMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 157/370 (42%), Gaps = 52/370 (14%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ +Y ++ + EA ++M E G + + +N M+++Y +NGQ +V +++ +
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTM 359
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K + +PD TYN+ ++ ND E A F E+K + PD +SY TL + + +
Sbjct: 360 KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRRMVK 419
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR---IWKKMMSLFAKMNDAEYT 223
+A + EM+ + S+L +Y + E+L W + + + M+ Y+
Sbjct: 420 EAEELIAEMDDNDVEIDEYTQSALTRMYI----EAEMLEKSWSWFRRVHVAGNMSSEGYS 475
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVP---NILLAAYINRNQLEMAESFYNRL 280
I + + G +AE ++ + + + R N+++ AY E A + +
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEV----NKRTVLEYNVMIKAYGISKSCEKACELFESM 531
Query: 281 VTKGIKPCYTTWELLTW-----------------------------------GYLKKGQM 305
++ G+ P T+ L ++K GQ+
Sbjct: 532 MSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYN 364
E +K+ + PD + N + G++ A + ++ AG ++ IYN
Sbjct: 592 NMAEEVYKEMVE--YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYN 649
Query: 365 SLLRTYAKAG 374
SL++ Y K G
Sbjct: 650 SLIKLYTKVG 659
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 21/289 (7%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAE----AEALMEKMSECGFLKCPLPYNHMLNL 89
FE++ PD C+ ++ VQ SA+ A+ +EKM E G++ +PY +++
Sbjct: 527 LFESMMSYGVTPDKCT--YNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISS 584
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ GQL+ ++ +E+ + N PDVV Y + + A A + + A +K+ I +
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGN 644
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY--TNMGYKDEVLRI 206
+ Y++L LY K+ ++A +++ R+C N Y + + + N+ + ++R
Sbjct: 645 SVIYNSLIKLYTKVGYLDEAEAIYRKL-LRSC--NETQYPDVYTSHCMNNLCSERSMVR- 700
Query: 207 WKKMMSLFAKM------NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
K ++F M N+ + ++ K G FE+A I + + DP N +
Sbjct: 701 --KAEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSV 758
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
L Y + + A + +V+ GI+P +T++ L +K G +K +
Sbjct: 759 LGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAV 807
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQML---QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
Y+ ++ Y G L + ++ QE+ K T V+ YN+ + A E A + F
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRT---VLEYNVMIKAYGISKSCEKACELFES 530
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + PD +Y+TL + ++P+KA L++M + + + Y +++S + +G
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ ++K+M+ + + Y +I++ G ++A + + + G+ + N
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 260 LLAAYINRNQLEMAESFYNRLV 281
L+ Y L+ AE+ Y +L+
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLL 672
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 12/235 (5%)
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM ++ + Y +L+ +Y+ G K L KM + + ++ V+ K
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 234 EFEKAENIYDEWESISGTGDPRVP------NILLAAYINRNQLEMAESFYNRLVTKGIKP 287
EF+KAE + +W D V N ++ Y Q++ A + R++ +GI P
Sbjct: 272 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + Y GQ +V K PD R + + DI+ A
Sbjct: 332 TTVTFNTMIHVYGNNGQFGEVTSLMKTM---KFHCAPDTRTYNILISLHTKNNDIERAGT 388
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKVL 399
++ AG + Y +LL ++ + K ++ M ++V++D TQ L
Sbjct: 389 YFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELIAEMDDNDVEIDEYTQSAL 443
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 13/305 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+H K EA ++++M E G + YN ++ + + G+++ ++ +E+
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ PD+ TYN L + + A K + E K + + + +Y + Y K
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E E+ + N + Y+ ++ + G L++ + M S N A Y+ +
Sbjct: 587 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I + +G E A+++ DE + VPN+ L+ Y Q++ AES + +
Sbjct: 647 IHGVCNIGLVEDAKHLIDEMRK-----EGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
++ I P T+ ++ GY K G MEK K S VPD N +
Sbjct: 702 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES--GIVPDVVTYNVLTNGFCKAN 759
Query: 341 DIDGA 345
D+D A
Sbjct: 760 DMDNA 764
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 5/259 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + LL K +A L ++ G + Y M+ Y +++ V +
Sbjct: 533 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 592
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYI 160
EL K + + YN+ + A QN A LE K+K I P+ +YS+L
Sbjct: 593 FNELLSKKMELNSIVYNIIIKA-HCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ L E A + EM K N V Y++L+ Y +G D W +M+S N
Sbjct: 652 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 711
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
YT +I KLG EKA N+ + + D N+L + N ++ A +++
Sbjct: 712 TYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 771
Query: 281 VTKGIKPCYTTWELLTWGY 299
T+G+ T+ L G+
Sbjct: 772 ATEGLPVDEITYTTLVHGW 790
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ + K L E+M++ G YN +L + G+LD ++ E
Sbjct: 502 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 561
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K ++ TY + + N E E F EL K++ + I Y+ + + +
Sbjct: 562 KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 621
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L+ M+ + N YSSL+ N+G ++ + +M N YT +
Sbjct: 622 AAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 681
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I KLG+ + AE+ + E S + + +++ Y +E A + ++ GI
Sbjct: 682 IGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 741
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
P T+ +LT G+ K M+ +
Sbjct: 742 VPDVVTYNVLTNGFCKANDMDNAFK 766
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 1/220 (0%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+K T P + T N L++ N+ E + F + + PD S++ + + K E
Sbjct: 179 RKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKME 237
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A +MEK N V Y+ +++ G D + +KM + N Y +I
Sbjct: 238 NAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALI 297
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ L+KL F+K +I DE + V N L+ Y +E A + +++K I
Sbjct: 298 NGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNIT 357
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
P T L G+ K Q+E ++ + S PD+
Sbjct: 358 PTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 397
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 13/323 (4%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
N L+ + + +K ++ + + + PDV ++ + A E A + F++++K
Sbjct: 190 NFXLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKL 249
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
I P+ ++Y+ + + + + A ++M + + N Y +L++ + + D+V
Sbjct: 250 GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKV 309
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
I +M+ N + +I K+G E A I D S + T L+
Sbjct: 310 NHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQG 369
Query: 264 YINRNQLEMAESFYNRLVTKG--IKP--CYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ +Q+E AE+ +++ G I P CY+ L KK + F K + S
Sbjct: 370 FCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC----KKFRYHSAFR-FTKMMLS- 423
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY-NSLLRTYAKAGKMPL 378
R + P L+T L + G A L L G ++++ N+L+ AGK+P
Sbjct: 424 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPE 483
Query: 379 I--IVERMQKDNVQMDAETQKVL 399
IV+ M + + MD T L
Sbjct: 484 ASRIVKEMLERGLPMDRITYNAL 506
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 133/347 (38%), Gaps = 34/347 (9%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + +++ QN + A L EKM+ G Y ++N I DKV +L E
Sbjct: 257 TYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEM 316
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ +P+VV +N + + E A K + I P ++ +L + K +
Sbjct: 317 IGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQI 376
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK-----------DEVLRIWKKMMSLF 214
E A L+E+ SS LS++ + Y R K M+S
Sbjct: 377 EHAENALEEI-----------LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 425
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR---VPNILLAAYINRNQLE 271
+ +D T ++ L K G+ +A + W + G P N L+ +L
Sbjct: 426 FRPSDLLLTMLVCGLCKDGKHLEATEL---WFRLLEKGSPASKVTSNALIHGLCGAGKLP 482
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLIT 330
A ++ +G+ T+ L G+ +G++E CF+ ++ + PD
Sbjct: 483 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG---CFRLREEMTKRGIQPDIYTYN 539
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
L G +D A L + +G +S Y ++ Y KA ++
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 3/299 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ L+ + + EA L E+M E G + YN +L+ + G+ +V + ++ L+
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P++ T+N L D A + FLE++ PD +SY+TL P +
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+EM + + V+Y+ L+ Y+ G D ++++ ++ + + Y+ +I
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L + G+ A ++ + + D V L+ +L + + +V P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+ LL + K + + V E F + + R + PD + L D D AE
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHEL--TERGFSPDVEISKVILETLRRSDDKDAAE 457
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 126/301 (41%), Gaps = 10/301 (3%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
L YN++L + +G+ D V + L P+ TY L + E A F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ P+ SYS L + + + ++AA L EM + N V Y SLLS MG
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E + ++ +M+ + Y +I K G+ +A +++E N
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF--KKAIG 317
LL+ + + + +S + ++ +G P T+ L G+ K G M + F +++G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGK 375
V + LI +K G A+ LL + +G V +I YN L+ Y+K+G
Sbjct: 258 CPPDVVSYNTLIRGMCSK----GKPHEAQRLLREMIRSG-VGPDIVSYNILIDGYSKSGA 312
Query: 376 M 376
+
Sbjct: 313 L 313
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 1/263 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
LL S Q ++ EA ++ M+ G Y+ ++ ++D+ ++L E +
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+VVTY L+ + A F + PD + Y+ L + K +A
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+EM ++ C Y+SLLS ++ G V ++K M+ N + ++
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K+G+ +A ++ E S+ D N L+ ++ + A+ ++ G+ P
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297
Query: 290 TTWELLTWGYLKKGQMEKVLECF 312
++ +L GY K G ++ ++ F
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLF 320
>gi|356574710|ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 821
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 170/400 (42%), Gaps = 54/400 (13%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T + L+ +Y + + EA +M + G + +N M+N+ ++G+L++V ++
Sbjct: 280 GSHTYNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEVSLLV 339
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+++++ SP+ TYN+ ++ A +D A K F +K+ ++PD +SY TL Y
Sbjct: 340 RKMEELRCSPNTRTYNILISLHAKHDDIGMATKYFETMKEACLEPDLVSYRTLLYAYSIR 399
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++ +A +KEM+KR ++ S+L +Y G D L +W + M Y
Sbjct: 400 KMIREAEELVKEMDKRRLEIDQYTQSALTRMYIEAGMLDRSL-LWFLRFHVAGNMTSECY 458
Query: 223 TCVISSLVKLGE----------------------------------FEKAENIYDEWESI 248
I + + G +EKA ++D E
Sbjct: 459 AANIDAYGEHGHTLEAEKVFIWCQKQKNLSVLEFNVMIKAYGIGKCYEKACQLFDSMEKH 518
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D L+ + +Q +A+ + ++ G+ + + + K GQ+E
Sbjct: 519 GVVADRCSYTSLIHILASADQPHIAKPYLKKMQEAGLVSDCIPYCAVISSFAKLGQLEMT 578
Query: 309 LECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSL 366
+ +++ I R V PD + N + G + A + ++ AG +T IYNSL
Sbjct: 579 EDIYREMI---RHGVQPDVIVHGILINVFSDAGRVKEAIGYVDEMKKAGLPGNTVIYNSL 635
Query: 367 LRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMP 406
++ YAK DN++ E K+L+++ E P
Sbjct: 636 IKLYAKI-------------DNLEKAKEAYKLLQLSDEGP 662
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 152/383 (39%), Gaps = 49/383 (12%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE + + PD S LL++Y K EAE L+++M + + + +YI
Sbjct: 373 YFETMKEACLEPDLVSYRTLLYAYSIRKMIREAEELVKEMDKRRLEIDQYTQSALTRMYI 432
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVT--YNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G LD+ +L L+ + + ++ + Y + A AEK F+ +K K +
Sbjct: 433 EAGMLDR--SLLWFLRFHVAGNMTSECYAANIDAYGEHGHTLEAEKVFIWCQKQK-NLSV 489
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ ++ + Y + EKA MEK +R +Y+SL+ + + KK
Sbjct: 490 LEFNVMIKAYGIGKCYEKACQLFDSMEKHGVVADRCSYTSLIHILASADQPHIAKPYLKK 549
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY--------------------------- 242
M + Y VISS KLG+ E E+IY
Sbjct: 550 MQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREMIRHGVQPDVIVHGILINVFSDAGR 609
Query: 243 --------DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
DE + G+ + N L+ Y + LE A+ Y L P +
Sbjct: 610 VKEAIGYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAKEAYKLLQLSDEGPGVYSSNC 669
Query: 295 LTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
+ Y+K+ +++ E F+ K G+ ++ ++ Y K+E D A + +
Sbjct: 670 MIDLYVKRSMVDQAKEIFETLKKNGAANEFT--FAMMLCLYKKIER---FDEAIQIAKQI 724
Query: 353 RNAGHVSTEIYNSLLRTYAKAGK 375
R G ++ YN++L YA AG+
Sbjct: 725 RKLGPLTDLSYNNVLDLYAIAGR 747
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 18/179 (10%)
Query: 207 WKKMMSLFA-------KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
W + + +F ++N Y ++ SL + ++ + E++++E +
Sbjct: 128 WDRALEIFEWFNKKGHELNVIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGT 187
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L+ Y + + A S+ N ++ +G++P T ++ Y K G+ +K E F
Sbjct: 188 LIDVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAGEFQKGEEFF------- 240
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHL--LVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
RKW L + + L ++ + L V NA + YN+L+ TY KAG++
Sbjct: 241 RKWSSGKPLRSKS-KPLRSNDNVVASPELDERVACANAS-FGSHTYNTLIDTYGKAGQL 297
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 97/258 (37%), Gaps = 34/258 (13%)
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM R Y +L+ +Y+ G +D+ L M+ + ++ V+ K G
Sbjct: 172 EMNARGIAATCSTYGTLIDVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAG 231
Query: 234 EFEKAENIYDEWES------------------ISGTGDPRVP-----------NILLAAY 264
EF+K E + +W S S D RV N L+ Y
Sbjct: 232 EFQKGEEFFRKWSSGKPLRSKSKPLRSNDNVVASPELDERVACANASFGSHTYNTLIDTY 291
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
QL+ A + ++ +G+ P T+ + G++E+V +K + P
Sbjct: 292 GKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEVSLLVRKM--EELRCSP 349
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA--KAGKMPLIIV 381
+ R + + DI A T++ A + Y +LL Y+ K + +V
Sbjct: 350 NTRTYNILISLHAKHDDIGMATKYFETMKEACLEPDLVSYRTLLYAYSIRKMIREAEELV 409
Query: 382 ERMQKDNVQMDAETQKVL 399
+ M K +++D TQ L
Sbjct: 410 KEMDKRRLEIDQYTQSAL 427
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
N M++LY+ +D+ ++ + LKKN + + T+ + L C + + E + +
Sbjct: 668 NCMIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAMML--CLYKKIERFDEAIQIAKQIR 725
Query: 144 KIDP-DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
K+ P +SY+ + LY P++A T KEM + + + N + SL +L G
Sbjct: 726 KLGPLTDLSYNNVLDLYAIAGRPKEAIETFKEMVRASIQVNDCSLRSLGNLLLRYG 781
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 174/411 (42%), Gaps = 60/411 (14%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLP-DKMRGPDTC------SALLHSYVQNKKSAE 63
V Q+Y++ A + + E FF+N + P C + L+ +Y + + E
Sbjct: 271 VVVQTYKK------AGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLRE 324
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLA 122
A M G + + +N M+++ ++GQL++ ++Q++++ PD TYN+ ++
Sbjct: 325 ASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILIS 384
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
A N+ + A F ++K+ +++PD +SY TL + L +A + EM++R
Sbjct: 385 LHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEI 444
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ S+L +Y G + +W + L M+ Y+ I + + G +AE +
Sbjct: 445 DEFTQSALTRMYIEAGMLKKSW-LWFRRFHLEGNMSSECYSANIDAYGERGHILEAEKAF 503
Query: 243 ---DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW-- 297
E +S N+++ AY N+ E A + + G+ P ++ L
Sbjct: 504 LCCKESRKLS----VLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQIL 559
Query: 298 ---------------------------------GYLKKGQMEKVLECFKKAIGSVRKWVP 324
++K GQ+E FK+ IG + P
Sbjct: 560 ASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQ--P 617
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
D + N + G++ A + + LRNAG ++ IYNSL++ Y K G
Sbjct: 618 DVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVG 668
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 72 SECGFLKCP-------LPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAA 123
+E FL C L +N M+ Y + + +K Q++ ++ + PD +YN +
Sbjct: 499 AEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQI 558
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
AS + A+ +++++T++ D I Y + S +IK+ E A KEM + +
Sbjct: 559 LASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPD 618
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y L++ + ++G E + + + MN Y +I K+G E+A+ Y
Sbjct: 619 VVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYK 678
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ D N ++ Y R+ ++ AE + L KG
Sbjct: 679 MLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKG 719
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 152/400 (38%), Gaps = 79/400 (19%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
++F+ + + PD S LL+++ EAE L+ +M E G + + +Y
Sbjct: 397 SYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMY 456
Query: 91 ISNGQLDKVPQMLQ--ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK---- 144
I G L K + L+ N S + + N+ A + AEKAFL K+++
Sbjct: 457 IEAGMLKKSWLWFRRFHLEGNMSSECYSANI--DAYGERGHILEAEKAFLCCKESRKLSV 514
Query: 145 ----------------------ID--------PDWISYSTLTSLYIKMELPEKAATTLKE 174
ID PD SY++L + +LP KA L +
Sbjct: 515 LEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMK 574
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M++ + + Y ++ ISS +KLG+
Sbjct: 575 MQETQLVSDCIPYCAV-----------------------------------ISSFIKLGQ 599
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
E AE ++ E + D V IL+ A+ + + A ++ N L G+ +
Sbjct: 600 LEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNS 659
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN 354
L Y K G +E+ E +K S + PD + E+ + AE + +L+
Sbjct: 660 LIKLYTKVGYLEEAQEAYKMLQAS--EVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKR 717
Query: 355 AGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
G + + +L Y + GK+ IV++M++ + D
Sbjct: 718 KGDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTD 757
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPDK + ++L+ +A+ + KM E + +PY +++ +I GQL+
Sbjct: 546 LPDKF----SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLE 601
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDK-------------------------- 130
+ +E+ N PDVV Y + + A A +
Sbjct: 602 MAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLI 661
Query: 131 ---------ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
E A++A+ L+ +++ PD S + + LY + + ++A + + KR
Sbjct: 662 KLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESL-KRKGD 720
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N +++ +L +Y +G E +I +KM L + Y V+ G F+ A
Sbjct: 721 ANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGT 780
Query: 242 YDE 244
+ E
Sbjct: 781 FKE 783
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 16/270 (5%)
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
KK + + I Y+ + + K + EM R Y +L+ +Y+ G
Sbjct: 188 KKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLT 247
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--- 257
+E L +M + ++ V+ + K GEF+KAE + W S+ P V
Sbjct: 248 EEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNW-SLESASQPHVCLSS 306
Query: 258 ---NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N L+ Y QL A + ++ +GI P T+ + GQ+E+ +K
Sbjct: 307 YTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQK 366
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAK 372
+ PD R + + +ID A ++ A + ++ Y +LL ++
Sbjct: 367 M--EELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEA-RLEPDLVSYRTLLYAFSI 423
Query: 373 ---AGKMPLIIVERMQKDNVQMDAETQKVL 399
G+ I+V M + +++D TQ L
Sbjct: 424 RHLVGEAE-ILVSEMDERGLEIDEFTQSAL 452
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 27 QTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
Q E F+ + PD L++++ EA + + G + YN
Sbjct: 599 QLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYN 658
Query: 85 HMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++ LY G L++ + + L+ + PDV + N + + ++ + AE+ F LK+
Sbjct: 659 SLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKR- 717
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
K D + S++ + +Y ++ ++A +++M + + ++Y+++L Y G +
Sbjct: 718 KGDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDA 777
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
+ +K+M+ + +D + + LVK G
Sbjct: 778 VGTFKEMIEAAIQPDDCTFKSLGVVLVKCG 807
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 44 GPDTCSA--LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
GPD S+ ++ Y + +AE + E + G + ML +Y G+L + Q
Sbjct: 686 GPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDAN-EFSFAMMLCMYKRIGKLKEAFQ 744
Query: 102 MLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
++Q++++ D+++YN L A + A F E+ + I PD ++ +L + +
Sbjct: 745 IVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLV 804
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
K +P++A L+ K+ + A++S+L
Sbjct: 805 KCGIPKQAVGKLEMTRKKDPQSGLQAWASIL 835
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T S+L+ + K + ++ +M + + ++ ++++++ G+L + ++ E
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + +PD +TYN + +N A + F + +PD ++YS L + Y K +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ +E+ + N + Y++L+ + G + ++++M+S + Y +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L GE KA I+++ + T + NI++ N ++++ A S + L KG+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KP T+ ++ G KKG + + F+K
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 158/357 (44%), Gaps = 16/357 (4%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT S L++ + + +EA AL+++M E + + ++N G++ + +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + + PD VTY L + A F ++++ I + YS + K
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A + EME + + + V YSSL+ N G D+ ++ ++M+ +
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
++ +I VK G+ +A+ +Y+E + D N L+ + N L A ++ +V
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE---- 337
+KG +P T+ +L Y K +++ + F++ S + +P+ T YN L
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPN----TITYNTLVLGFC 431
Query: 338 EQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQM 391
+ G ++ A+ L + + G S Y LL G++ L I E+MQK + +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 4/323 (1%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-T 110
L + + + K +A L E M + L P+ +N + + Q D V + ++ N
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI 101
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
D+ T + + + A K +PD I++STL + + +A
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ M + R + V S+L++ G E L + +M+ + ++ Y V++ L
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G A +++ + E + +I++ + + A S +N + KGIK
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T+ L G G+ + + ++ IG R +PD +A + ++G + A+ L
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIG--RNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 351 TLRNAGHVSTEI-YNSLLRTYAK 372
+ G I YNSL+ + K
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCK 362
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + K P+T + L+ + Q+ K A+ L ++M G + Y +L+
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
NG+L+K ++ ++++K+ + + YN+ + + + + A F L + PD +
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+Y+ + K +A ++M++ C + Y+ L+
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 7/255 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI----SNGQLDKVPQM 102
TC+ ++ ++ + + EA LM +M G YN ++N S L+ P M
Sbjct: 502 TCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLM 561
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
L K+N P VV Y+ + A Q++ + A + + K + PD ++Y+ L ++
Sbjct: 562 L---KRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHR 618
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+A K+M + ++++Y+S+++ + +G + ++ +M+ Y
Sbjct: 619 SRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTY 678
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T ++ K+ + A+ + DE + T D N+L+AA+ R L+ A N +
Sbjct: 679 TSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKE 738
Query: 283 KGIKPCYTTWELLTW 297
G+ P + T+ +L W
Sbjct: 739 NGVLPDHMTYMMLEW 753
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 123/300 (41%), Gaps = 10/300 (3%)
Query: 83 YNHMLNLYISNGQLDK-VPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
++ ++ ++ +N L+ V LQ K + N L A N +E F E+K
Sbjct: 182 FDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMK 241
Query: 142 KTKIDPDWISYSTLTSLYIKMELPE------KAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
T P+ +Y+ + + Y K E +A L+EME+ V YS+ +
Sbjct: 242 STGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLC 301
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
+GY + L + ++S +N Y +I L K GE ++A + +E +S + D
Sbjct: 302 RVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVY 361
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+IL+ + + +E + ++P ++ L G KK + L+ F+
Sbjct: 362 TYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL 421
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAG 374
+ K+ D + QGD+D A L+ + RN + SL+ + K G
Sbjct: 422 GAAGYKY--DQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMG 479
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 154/398 (38%), Gaps = 47/398 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN--GQLD----KVP 100
+C+ LL + + +L E+M G Y M+N Y G+ D +
Sbjct: 216 SCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQAT 275
Query: 101 QMLQELKKNT-SPDVVTY-----------------------------------NLWLAAC 124
++L+E+++N SP VVTY N +
Sbjct: 276 EILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ + + A K E+K I PD +YS L + K EK ++EM+ +
Sbjct: 336 CKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSL 395
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
V+YSSL D L I++ + + K + Y+ +I G+ + A + +E
Sbjct: 396 VSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ DP L+ + A F+N ++ GI P T ++ + ++G+
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIY 363
+E+ L + + P+ A N+L ++ + A L + L+ S +Y
Sbjct: 516 VEEALNLMNEM--QTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVY 573
Query: 364 NSLLRTYAKA--GKMPLIIVERMQKDNVQMDAETQKVL 399
++L+ +AK + L++ RM K V D +L
Sbjct: 574 STLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTIL 611
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 120/314 (38%), Gaps = 38/314 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
S L+ + A LME+M P + +++ + G ++ + L+
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P + T N+ + A + E A E++ I P+ +Y+ + + K E+
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM---------------- 211
A M KR + V YS+L+ + + L ++ +M+
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613
Query: 212 ------------SLFAKMND-------AEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+LF KM + YT VI+ ++G+ KA +++E
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
L+ Y N++++A+ + + KGI P T+ +L + ++G ++K LE
Sbjct: 674 TVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML 733
Query: 313 KKAIGSVRKWVPDH 326
+ +PDH
Sbjct: 734 NEM--KENGVLPDH 745
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 167/373 (44%), Gaps = 18/373 (4%)
Query: 33 NFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL------MEKMSECGFLKCPLPYNHM 86
++FE + PDT + + Y +K ++AL +K +EC + + +
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAEC--RPDVVTFTSI 326
Query: 87 LNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
++LY G+++ + + L + P++V+YN + A A E A F ++K+ I
Sbjct: 327 MHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGI 386
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
PD +SY++L + Y + P KA M K + N V Y++L+ Y + G+ E +
Sbjct: 387 VPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
I+++M K N ++++ + + E + +S + N + +YI
Sbjct: 447 IFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYI 506
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SVRKWVP 324
N +LE A + Y + K +K T+ +L G + + + + K+ S+
Sbjct: 507 NAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE 566
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY---AKAGKMPLII 380
+ + AY+K QG + AE + ++ AG I Y S+L Y K GK +
Sbjct: 567 VYSSVLCAYSK---QGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 381 VERMQKDNVQMDA 393
+E M+ + ++ D+
Sbjct: 624 LE-MEANGIEPDS 635
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S +LL+SY ++++ +A+ + M + + YN +++ Y SNG L + ++
Sbjct: 388 PDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++++++ T P+VV+ LAAC+ K E + I+ + +Y++ YI
Sbjct: 448 FRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
EKA + M K+ + + V ++ L+S M E + K+M L +
Sbjct: 508 AAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ V+ + K G+ +AE+I+++ + D +L AY + A + +
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVL 309
GI+P L + K GQ V
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVF 655
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 121/316 (38%), Gaps = 46/316 (14%)
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
YN+ + A N + A F E++K PD +Y L + + + A + +M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-------------------------- 210
+ +R Y++L++ + G + L + KKM
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 211 --MSLFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-- 259
+S F M A+ + +I L KLG+ +A ++++ P V
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTS 325
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
++ Y R ++E + + ++ +G+KP ++ L Y G E L F G +
Sbjct: 326 IMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVF----GDI 381
Query: 320 RK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++ VPD T+ N A+ + + +R + YN+L+ Y G +
Sbjct: 382 KRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 377 --PLIIVERMQKDNVQ 390
+ I +M++D +
Sbjct: 442 AEAVEIFRQMEQDGTK 457
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 133/364 (36%), Gaps = 54/364 (14%)
Query: 2 ERRRPHGAQVRA--QSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSA--LLHSYVQ 57
ERR+P+ A +Y A+A++ F + P+ S LL + +
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVE------IFRQMEQDGTKPNVVSVCTLLAACSR 472
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVT 116
+KK E ++ G YN + YI+ +L+K + Q + KK D VT
Sbjct: 473 SKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVT 532
Query: 117 YNLWLAA---------------------------------CA--SQNDKETAEKAFLELK 141
+ + ++ CA Q AE F ++K
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 592
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
PD I+Y+++ Y E KA EME + +A S+L+ + G
Sbjct: 593 MAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 652
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
V + M A + + S+ L E+++A ++ + + + N +L
Sbjct: 653 NVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQML 712
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ ++E + +++ G++ + T+ +L L G K +E V +
Sbjct: 713 YLFGKSGKVEAMMKLFYKIIASGVEINFKTYAILLEHLLAVGNWRKYIE--------VLE 764
Query: 322 WVPD 325
W+ D
Sbjct: 765 WMSD 768
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 8/354 (2%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
+A Q +R F P K R +C+A L+ + K + M G + Y
Sbjct: 200 EAGQCFSRMTRFRVFP-KAR---SCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTY 255
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N M+ G + + ++K+ +PD+VTYN + + + F E+K
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD 315
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+PD I+Y+ L + + K E KA L EM+ + N V YS+L+ +
Sbjct: 316 VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQ 375
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
++ M + N+ YT +I + K G A + DE + + LL
Sbjct: 376 AIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLD 435
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
++ AE + ++ G+ P T+ L G++K ++E LE +K
Sbjct: 436 GLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALE--LLKEIKEKKI 493
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
PD L L Q ++ E ++ ++ G ++ IY + Y K GK
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGK 547
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L+ Y + E+ L E+M + G + YN ++N + Q+ K
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L E+K + P+VVTY+ + A ++ + A K L++++ + P+ +Y++L K
Sbjct: 345 LHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCK 404
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
A EM + N V Y++LL G E +++ M+ N
Sbjct: 405 AGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT ++ +K E A + E + D + ++ ++N+LE E + +
Sbjct: 465 YTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMK 524
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVL 309
GI+ + + Y K G+ + L
Sbjct: 525 ACGIRANSVIYTIRMDAYFKTGKTVEAL 552
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 112/301 (37%), Gaps = 37/301 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + + EAE L M + G Y +++ +I N +++ ++L+E+
Sbjct: 429 TYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEI 488
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ PD++ Y + SQN E E E+K I + + Y+ Y K
Sbjct: 489 KEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKT 548
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS------------- 212
+A L+EM V + L+ G +E + + +M
Sbjct: 549 VEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTA 608
Query: 213 ----------------LFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESIS 249
LF +M D YT +I +K +F++A NI +
Sbjct: 609 LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELG 668
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D L+ N ++ A F N ++ KGI P L Y + G +++ +
Sbjct: 669 MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAI 728
Query: 310 E 310
E
Sbjct: 729 E 729
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 11/269 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+H +V+ A + KM CG + Y M+++ N D+ +++ +
Sbjct: 390 TYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNM 449
Query: 107 KKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P VVT+N ++ A + ++++ PD +Y+ L +
Sbjct: 450 ATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNEL 509
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A ++E+E+R N V Y++++ +++ G ++ VL++ +M+ K + V
Sbjct: 510 KEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVV 569
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I + KLG+ A D + G P+I LL N +E A + N++
Sbjct: 570 IYAYSKLGKVRTAIQFLDRITA----GKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKM 625
Query: 281 VTKGIKPCYTTWELLTWGYLKK-GQMEKV 308
+ KGI P TW++L G+ KK G M +
Sbjct: 626 LNKGIFPNIATWDVLVRGFFKKLGHMGPI 654
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 36/257 (14%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAA- 123
A+ E M G YN +L NG+LD ++L E+ K+ PD V+Y +AA
Sbjct: 166 AVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAM 225
Query: 124 -----------------------------CASQNDKETAEKAFL--ELKKTKIDPDWISY 152
C + E L E+ +DP+ +SY
Sbjct: 226 CEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSY 285
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
S++ S + E A L +M +R CR N +SSL+ Y G E + +W+ M+
Sbjct: 286 SSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVL 345
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQL 270
+ N Y +++ L G +A ++ E P V + L+ ++ L
Sbjct: 346 EGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEK-DCFCRPNVTTYSTLVHGFVKAGDL 404
Query: 271 EMAESFYNRLVTKGIKP 287
+ A +N++V G++P
Sbjct: 405 QGASEVWNKMVNCGVRP 421
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 6/233 (2%)
Query: 108 KNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ P+VV YN L C S N E + K P+ +YSTL ++K +
Sbjct: 346 EGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQ 405
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A+ +M R N V Y+S++ + D+ R+ M + + I
Sbjct: 406 GASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFI 465
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L G A + D+ + D R N LL + N+L+ A L + ++
Sbjct: 466 KGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVE 525
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH---RLITAAYNKL 336
T+ + +G+ G+ E VL+ + + V PD ++ AY+KL
Sbjct: 526 LNLVTYNTVMYGFSSHGKEEWVLQVLGRML--VNGVKPDAITVNVVIYAYSKL 576
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 86 MLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACA--SQNDKETAEKAFLELKK 142
+LN Y ++G D+ +M +K+ P V YN L A S N + ++
Sbjct: 114 VLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRG 173
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
++P+ +Y+ L K + A L EM KR C + V+Y+++++ G +E
Sbjct: 174 EGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEE 233
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNI-- 259
+ ++ A+ + +I L + G + + DE + G G DP V +
Sbjct: 234 AREVARR---FGAEGVVSVCNALICGLCREGRVGEVFGLMDE---MVGNGVDPNVVSYSS 287
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+++ + ++E+A + +++ +G +P T+ L GY G++
Sbjct: 288 VISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRV 333
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 4/328 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELK 107
+A++ + + + A ++ +M GFL + YN M+ + +L +L Q L
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P V+TY + + A + A K E+ + PD +Y+ + K + E+
Sbjct: 211 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVER 270
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
AA + + + C + ++Y+ LL + N G DE ++ +M S + N Y+ +IS
Sbjct: 271 AAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 330
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
SL + G ++A ++ T D + L++A +L++A + +++ G P
Sbjct: 331 SLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLP 390
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ + K G + LE F K G P+ + L GD A
Sbjct: 391 DIVNYNTILAALCKNGNANQALEIFNKLRG--MGCPPNVSSYNTMISALWSCGDRSRALG 448
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
++ + + G EI YNSL+ + G
Sbjct: 449 MVPAMISKGIDPDEITYNSLISCLCRDG 476
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 140/325 (43%), Gaps = 3/325 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
LL+ + K E+ +E + G+ + ++ + + ++K ++++ L+ +T
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV YN ++ N E A + +K PD ++Y+ + A T
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
L ++ C + Y+ L+ G +E +++ ++M++ + Y +I +
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G E+A + S D NILL A++N+ + + E + ++G +P
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T+ +L + G++++ + K I ++ PD + L ++G +D A ++
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIE--KELTPDTYSYDPLISALCKEGRLDLAIGIMD 381
Query: 351 TLRNAGHVSTEI-YNSLLRTYAKAG 374
+ + G + + YN++L K G
Sbjct: 382 YMISNGCLPDIVNYNTILAALCKNG 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + EA L+E+M G L YN ++ G +++ +++ L
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 278
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K PDV++YN+ L A +Q + EK E+ +P+ ++YS L S +
Sbjct: 279 TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 338
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + LK M ++ + +Y L+S G D + I M+S + Y +
Sbjct: 339 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 398
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++L K G +A I+++ + + N +++A + A +++KGI
Sbjct: 399 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGI 458
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ L + G +E+ +
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAI 482
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+ + RA E +L K PD S LL +++ K E E L+ +M G +
Sbjct: 265 EGMVERAAE-LITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323
Query: 82 PYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
Y+ +++ G++D+ +L+ ++K +PD +Y+ ++A + + A +
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
PD ++Y+T+ + K +A ++ C N +Y++++S + G +
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-NI 259
L + M+S ++ Y +IS L + G E+A + D+ E SG + NI
Sbjct: 444 SRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ-SGFRPTVISYNI 502
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+L +++ A + ++ KG +P TT+ LL G
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 541
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT S L+ + + + A +M+ M G L + YN +L NG ++ ++
Sbjct: 355 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEI 414
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+L+ P+V +YN ++A S D+ A + IDPD I+Y++L S +
Sbjct: 415 FNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCR 474
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
L E+A L +ME+ R ++Y+ +L + D+ + ++ +M+ + N+
Sbjct: 475 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 534
Query: 222 YTCVISSL 229
Y +I +
Sbjct: 535 YILLIEGI 542
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQ----LDKVPQ 101
+ +L + +N + +A + K+ G CP YN M++ S G L VP
Sbjct: 396 NTILAALCKNGNANQALEIFNKLRGMG---CPPNVSSYNTMISALWSCGDRSRALGMVPA 452
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M+ K PD +TYN ++ E A +++++ P ISY+ + K
Sbjct: 453 MIS---KGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 509
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ + A EM ++ CR N Y L+ G++ E + + + S
Sbjct: 510 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 150/357 (42%), Gaps = 14/357 (3%)
Query: 25 ALQTRARENFFENL----PDKMRGPDT----CSALLHSYVQNKKSAEAEALMEKMSECGF 76
A++TR R +L P + DT S ++ + + AEA + +M E G
Sbjct: 63 AVRTRRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGS 122
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEK 135
YN ++N + QL+ ++ E++ + SP VVTY + + + A
Sbjct: 123 APDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMD 182
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT--CRKNRVAYSSLLSL 193
E++ I P+ ++Y+ L E+A LKEM+ R C N V Y+ L+
Sbjct: 183 ILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHG 242
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G + + +M+ N+A YT +I L + G F +A + +E +I D
Sbjct: 243 LCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELD 302
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ N L+ +L+ A +V KG+ P T+ L G G +++ L +
Sbjct: 303 VVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQ 362
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRT 369
+ + VP+ T N + D A L+ +++ G + + +IY L ++
Sbjct: 363 EM--RAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKS 417
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 17/271 (6%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
DV++Y+ + + A + F E+++ PD +Y+ L + K E + +
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
EM+ R V Y++L+ + G D + I +M N YT +I L
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKP 287
GE E+A + E + G+ PN+ L+ + EM F + ++ G P
Sbjct: 210 GEVERAILVLKEMKL---RGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFP 266
Query: 288 CYTTWELLTWGYLKKGQM--EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ L G +KG VL AIG V + LI + L + G++D A
Sbjct: 267 NNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLI----DGLCKMGELDFA 322
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
+ + + G V+ ++ Y SL++ AG
Sbjct: 323 REMQILMVEKG-VAPDVFTYTSLIQGLCDAG 352
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 140/300 (46%), Gaps = 10/300 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ + + GQ +KV ++ E+ + + PD +TY+ +++ ++A + F E+
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K + P Y+TL +Y K+ EKA +EM++ C Y+ L+ G
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-- 258
DE +K M+ + +++ L K+G E+ N++ E T P V +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT--PTVVSYN 377
Query: 259 -ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
++ A + ++ + S+++++ + P T+ +L GY K ++EK L ++
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM-- 435
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + N L + + A+ L L+ N G+VS+ +Y +++ + K GK+
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 136/330 (41%), Gaps = 12/330 (3%)
Query: 48 CSALLHSYVQNKKSA-------EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
CS +++Y + K EA + M G + N+++N+ G+++++
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 101 QMLQELKK-NTSPDVVTYNLWLAAC-ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ E+ +P VV+YN + A S+ F ++K + P +YS L
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y K EKA L+EM+++ AY SL++ + ++K++ F ++
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVS 478
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y +I K G+ +A ++++E ++ D N L++ + + A S
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLR 538
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
++ G + + ++ G+ + G + +E F+ S K PD
Sbjct: 539 KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK--PDGVTYNTLLGCFAH 596
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
G + A ++ +++ G I Y+S+L
Sbjct: 597 AGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ Y + + +A L+E+M E GF CP Y ++N + + ++ +EL
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKEL 470
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N + Y + + A F E+K PD +Y+ L S +K +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + L++ME+ CR + +++ +L+ + G + +++ + K + Y +
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 226 ISSLVKLGEFEKAENIYDE 244
+ G FE+A + E
Sbjct: 591 LGCFAHAGMFEEAARMMRE 609
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
+ A +R A L +ENF N+ ++ + ++ + + K +EA L +
Sbjct: 451 INALGKAKRYEAADELFKELKENF-GNVSSRVY-----AVMIKHFGKCGKLSEAVDLFNE 504
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQND 129
M G YN +++ + G +++ +L+++++N D+ ++N+ L A
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A + F +K + I PD ++Y+TL + + E+AA ++EM+ + + + YSS
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 190 LLSLYTNMGY-KDEV 203
+L N+ + KD+V
Sbjct: 625 ILDAVGNVDHEKDDV 639
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 3/192 (1%)
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
S L + ++ KA + + + R C+ Y+S++ + G ++V ++ +M +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 213 LFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
D Y+ +ISS KLG + A ++DE + ++ LL Y ++E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A + + G P T+ L G K G++++ +K + PD +
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD--GLTPDVVFLNN 343
Query: 332 AYNKLEEQGDID 343
N L + G ++
Sbjct: 344 LMNILGKVGRVE 355
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 121/270 (44%), Gaps = 7/270 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ----MLQ 104
+AL+ SY + K AEA+ +M G + Y +L ++ + + + +L
Sbjct: 185 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 244
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
E K PD Y++ + + E A K F + + ++Y++L S +
Sbjct: 245 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK- 303
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ + +M++ + + V+Y+ L+ Y ++E L ++++M+ + Y
Sbjct: 304 --EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + G E+A+ ++ D +L+AY+N + +E AE F+ R+ G
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+P T+ L GY K +EK++E ++K
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 19/309 (6%)
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDK 130
SE FL Y + N NG ++V +L K ++P+V++Y + +
Sbjct: 144 FSEIDFLMLITAYGKLGNF---NGA-ERVLSVLS--KMGSTPNVISYTALMESYGRGGKC 197
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYI---KMELPEKAATTLKEMEKRTCRKNRVAY 187
AE F ++ + +P I+Y + ++ K + E+ TL + +K + ++ Y
Sbjct: 198 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 257
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
++ +Y G ++ +++ M+ + Y ++S E K IYD+ +
Sbjct: 258 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQR 314
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D +L+ AY + E A S + ++ G++P + + +L + G +E+
Sbjct: 315 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 308 VLECFKKAIGSVR--KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
FK S+R + PD T + D++GAE ++ G + Y
Sbjct: 375 AKTVFK----SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 365 SLLRTYAKA 373
+L++ YAKA
Sbjct: 431 TLIKGYAKA 439
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 42/283 (14%)
Query: 32 ENFFENLPDKMRGP-----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
E FE L D+ + P +++ Y + +A + M G + + YN +
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTY----------------------------- 117
++ S ++ K+ +Q + + PDVV+Y
Sbjct: 296 MSFETSYKEVSKIYDQMQ--RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 353
Query: 118 ------NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
N+ L A A E A+ F +++ +I PD SY+T+ S Y+ E A
Sbjct: 354 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
K ++ N V Y +L+ Y ++++ +++KM K N T ++ + +
Sbjct: 414 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 473
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
F A Y E ES D + N+LL+ +++LE A+
Sbjct: 474 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 516
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 147/360 (40%), Gaps = 38/360 (10%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F +P K PD T S L++ + ++ EA L+++M G L P+ +N +++
Sbjct: 221 FREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSK 280
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
NG L + +++ + K P+ VTYN + + + A ++ +K P+ ++
Sbjct: 281 NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 340
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y T+ + +K E L ME+R + N YSSL+S G + +R+WK+M
Sbjct: 341 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 400
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES----------------ISGTGDPR 255
K N Y I L + + ++AE+I E S GD +
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 460
Query: 256 -------------------VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
++LL +L A + + ++ +G+KP + +
Sbjct: 461 KAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMI 520
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
G G ++K L+ F + K PD +N L Q ++ A LL ++ + G
Sbjct: 521 KGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 580
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 3/244 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++ V+ +++ + ++ M E G Y+ +++ G+ + ++ +E+
Sbjct: 340 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 399
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P+VV Y ++ + AE E+ P+ +YS+L + K
Sbjct: 400 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 459
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA KEM + R N V S LL+ G E L +W M+ K + Y+ +
Sbjct: 460 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSM 519
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTK 283
I L +G +K ++ E + P V NIL A ++ L A N ++ +
Sbjct: 520 IKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 579
Query: 284 GIKP 287
G P
Sbjct: 580 GCDP 583
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 127/313 (40%), Gaps = 10/313 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL----KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+N +LN+ I G + + K P+++TYNL + A + A F
Sbjct: 163 FNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFR 222
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ +PD +YSTL + K ++A L EM+ C N V ++ L+ + G
Sbjct: 223 EMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 282
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
++ M N+ Y +I L G+ +KA ++ ++ S +
Sbjct: 283 DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYG 342
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
++ + + + E + +G K + L G K+G+ E + +K+ +
Sbjct: 343 TIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM--A 400
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--- 374
+ P+ + A + L D AE +L + + G + Y+SL++ + K G
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 460
Query: 375 KMPLIIVERMQKD 387
K L+ E M +D
Sbjct: 461 KAILVWKEMMSQD 473
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
CS LL+ ++ + EA + M G + Y+ M+ G +DK ++ E++
Sbjct: 481 CSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQ 540
Query: 108 ---KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST-LTSLYIKME 163
+ PDVVTYN+ A Q++ A + DPD ++ + L +L ++
Sbjct: 541 CQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERIN 600
Query: 164 LPEKAATTLKEMEKRTCRKNR 184
P+ L E+ R ++ R
Sbjct: 601 PPQDGRLFLDELVVRLLKRER 621
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK- 141
++H L +Y Q+D + T +++N+ L+AC + + + F E+
Sbjct: 116 FDHALKIY---DQMDDL---------GTPRSAISFNVLLSACVNTKQYDRVRQLFDEMPV 163
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K PD +SY L Y +M LPEKA LKEME++ + +++LL + G D
Sbjct: 164 KYGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLHAFYKKGMGD 223
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E ++W +M++ + Y I + ++ G+ E + + +E + D N L+
Sbjct: 224 EAEKVWNEMVNKGCGPDVGAYNVKIRN-IQGGDPEGVKALIEEMNNAGLKPDTISYNYLM 282
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
Y ++ A+ Y L T G P T+ L KKG+ E + FK+++
Sbjct: 283 TCYCENGLMDEAQKVYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKVFKESV 337
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAE---ALMEKMSECGFLKCPLPYNHMLN 88
E + + +K GPD + ++N + + E AL+E+M+ G + YN+++
Sbjct: 226 EKVWNEMVNKGCGPDV--GAYNVKIRNIQGGDPEGVKALIEEMNNAGLKPDTISYNYLMT 283
Query: 89 LYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y NG +D+ ++ ++L+ N +P+ T+ + + ET K F E + P
Sbjct: 284 CYCENGLMDEAQKVYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKVFKESVRVNKMP 343
Query: 148 DWISYSTLTSLYIKME 163
D+ + L +K E
Sbjct: 344 DFNTLKCLVEGLVKRE 359
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 79/195 (40%), Gaps = 48/195 (24%)
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP---NILLAAYINRNQLEMAESFYNR 279
+ +I S G F+ A IYD+ + + G PR N+LL+A +N Q + ++
Sbjct: 104 SSIIRSYGIAGMFDHALKIYDQMDDL---GTPRSAISFNVLLSACVNTKQYDRVRQLFDE 160
Query: 280 LVTK-GIKPCYTTWELLTWGYLKKGQMEKVLE-----------------------CFKKA 315
+ K G P ++ +L Y + G EK +E +KK
Sbjct: 161 MPVKYGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLHAFYKKG 220
Query: 316 IGSVRKWV----------PDHRLITAAYN-KLE--EQGDIDGAEHLLVTLRNAGHVSTEI 362
+G + V PD AYN K+ + GD +G + L+ + NAG I
Sbjct: 221 MGDEAEKVWNEMVNKGCGPD----VGAYNVKIRNIQGGDPEGVKALIEEMNNAGLKPDTI 276
Query: 363 -YNSLLRTYAKAGKM 376
YN L+ Y + G M
Sbjct: 277 SYNYLMTCYCENGLM 291
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 159/364 (43%), Gaps = 10/364 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
D L+ SY + E+ + +KM E G + Y+ + + + G+ +
Sbjct: 188 DLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNA 247
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L + P TYN+ + ETA + F E+K+ +I PD ++Y+T+ + Y +++
Sbjct: 248 MLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKK 307
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E+A EM+ R ++Y++++ Y ++G D+ LR++++M S K N Y+
Sbjct: 308 MEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYST 367
Query: 225 VISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
++ L + +A+N+ E E D + L+ QL+ A ++
Sbjct: 368 LLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRL 427
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL--ITAAYNKLEE--- 338
I + +L + K G ++ ++ K I P + L ++ YN + E
Sbjct: 428 SIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLC 487
Query: 339 -QGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAET 395
G AE L L G +N+L+R ++K G + I++ M + V +A+
Sbjct: 488 NSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADA 547
Query: 396 QKVL 399
++L
Sbjct: 548 YRLL 551
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 163/374 (43%), Gaps = 28/374 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ + + K A E+M E + YN M+N Y ++++ + E+
Sbjct: 259 TYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEM 318
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K +N P V++Y + S + + F E+K I P+ ++YSTL E
Sbjct: 319 KGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKM 378
Query: 166 EKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A +KEM E+ K+ + L++ G D + K M+ L Y
Sbjct: 379 LEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGV 438
Query: 225 VISSLVKLGEFEKAENIYD---EWESI-----SGTGDPRVPNILLAAYINRNQLEMAESF 276
+I + K G +++A + D E E I S + N+++ N Q AE+
Sbjct: 439 LIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETL 498
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP----DHRLITAA 332
+ +L+ KG++ + L G+ K+G E E K +G R+ VP +RL+ +
Sbjct: 499 FRQLMKKGVQDP-IAFNNLIRGHSKEGAPESAFEIL-KIMG--RREVPREADAYRLLIES 554
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI------IVERMQ 385
+ K E D A+ L + GH+ + ++ S++ + + G++ +VE+
Sbjct: 555 FLKKGEPAD---AKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGV 611
Query: 386 KDNVQMDAETQKVL 399
K+N+ + A+ + L
Sbjct: 612 KENMDLVAKILEAL 625
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 135/346 (39%), Gaps = 19/346 (5%)
Query: 25 ALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
+L+ FFE + ++ PD T + +++ Y + KK EAE +M +
Sbjct: 270 SLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVIS 329
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y M+ Y+S G++D ++ +E+K P+ VTY+ L A+ E+
Sbjct: 330 YTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMV 389
Query: 142 KTKIDP-DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ I P D + L + K + AA LK M + + Y L+ + G
Sbjct: 390 ERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVY 449
Query: 201 DEVLRIWKKMM----------SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
D +++ K++ SL +M + Y +I L G+ KAE ++ + G
Sbjct: 450 DRAVKLLDKLIEKEIILRPQNSL--EMESSGYNLIIEYLCNSGQTSKAETLFRQLMK-KG 506
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
DP N L+ + E A + + + + LL +LKKG+
Sbjct: 507 VQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKT 566
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
I + +PD L + L E G I A ++ + G
Sbjct: 567 ALDGMIEN--GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKG 610
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 158/392 (40%), Gaps = 65/392 (16%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN---------------- 88
P ++L+H+Y ++ A A L++KM +CG + YN ++
Sbjct: 112 PRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLA 171
Query: 89 ----------------LYISN--------GQLDKVPQMLQEL-KKNTSPDVVTYNLWLAA 123
+ ISN G+ +K +++E+ K PD TY+ +
Sbjct: 172 EKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGY 231
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
+ + E A + F E+K+ I PD Y+TL + K E+A EME+ C N
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y++L+ Y + +++ M+S N YT +I L K G+ EKA IY
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351
Query: 244 --------------EWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKG 284
+ + G + PN+ L+ Q++ A + +G
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNE--PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEG 409
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+P + ++ L G K G++++ E F + + P+ ++ ++L + +D
Sbjct: 410 CEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC--GYDPNVYTYSSLIDRLFKDKRLDL 467
Query: 345 AEHLLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
A +L L N+ + IY ++ K GK
Sbjct: 468 ALKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 499
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 7/227 (3%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
AL+ + K EA+ + M ECG+ Y+ +++ + +LD ++L ++ +N
Sbjct: 419 ALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLEN 478
Query: 110 T-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ +P+VV Y + + A K + +++ +P+ ++Y+ + + K EK
Sbjct: 479 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKC 538
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L++M + C N V Y L++ + G DE ++ ++M + + A Y VI
Sbjct: 539 LELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEG 598
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMA 273
+ E ++Y +E P P +L+ +I +LE+A
Sbjct: 599 FNR----EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIA 641
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 147/372 (39%), Gaps = 35/372 (9%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N+F+ + P+ T +AL+H+Y++++K ++A + E M G + Y +++
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337
Query: 91 ISNGQLDKVPQMLQELKK------------------NTSPDVVTYNLWLAACASQNDKET 132
G+++K Q+ + +KK + P+V TY + +
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A + +P+ + Y L K ++A M + N YSSL+
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
D L++ KM+ N YT +I L K+G+ ++A + E
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVL 309
+ ++ + ++E ++ +KG P + T+ +L G ++ K+L
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST---EIYNSL 366
E K+ + P H A Y K+ E + + L ++ + + S +Y L
Sbjct: 578 EEMKQT------YWPRH---VAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVL 628
Query: 367 LRTYAKAGKMPL 378
+ + KAG++ +
Sbjct: 629 IDNFIKAGRLEI 640
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 147/311 (47%), Gaps = 8/311 (2%)
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
P N ++ + G ++++ + +++K+N P + TYN + S ++AE+ F +
Sbjct: 189 PGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL-SLYTNMGY 199
+ +I PD ++Y+T+ Y K +KA L+ ME + +++ Y +++ + Y + +
Sbjct: 249 ESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDF 308
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
V ++++M ++ ++ VI L K G+ + +++ + + +
Sbjct: 309 SSCV-ALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTV 367
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L+ Y +E A +R++ +G P T+ ++ G K G++E+ ++ F+
Sbjct: 368 LIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTC--RF 425
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM-- 376
+ ++ + L + G +D AE L + G + YN+L+ + K GK+
Sbjct: 426 NGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDE 485
Query: 377 PLIIVERMQKD 387
L + +RM+++
Sbjct: 486 ALALFKRMEEE 496
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 12/249 (4%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAAC 124
AL ++M E G P ++ ++ G+L++ + + + +K + P+V Y + +
Sbjct: 313 ALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
A E A + + +PD ++YS + + K E+A + TCR N
Sbjct: 373 AKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQ-----TCRFNG 427
Query: 185 VA-----YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
+A YSSL+ G DE R++++M + Y +I + K G+ ++A
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAL 487
Query: 240 NIYDEWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
++ E G IL++ ++ E A ++ ++ KGI P L+ G
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTG 547
Query: 299 YLKKGQMEK 307
G++ +
Sbjct: 548 LCLSGKVAR 556
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P S ++ + K E A+ E M G Y +++ Y G ++ ++L
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLH 386
Query: 105 EL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ + +PDVVTY++ + E A F + + + + YS+L K
Sbjct: 387 RMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAG 446
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE-- 221
++A +EM ++ C ++ Y++L+ +T G DE L +LF +M + E
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAL-------ALFKRMEEEEGC 499
Query: 222 ------YTCVISSLVKLGEFEKAENIYD 243
YT +IS + K E+A ++D
Sbjct: 500 DQTVYTYTILISGMFKEHRNEEALKLWD 527
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 126/287 (43%), Gaps = 2/287 (0%)
Query: 29 RARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+A++ FFE + + T + L+H +N + + EKM E G YN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
N +G+ ++ E++ + S ++VTYN + + A K ++K I+
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ I+Y+TL + + KA + ++++ R + V Y+ L+S + G ++
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
K+M K + YT +I + + E A + E + D ++L+ +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ Q+ A + +V K ++P + + GY K+G + L F+
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFR 502
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 147/355 (41%), Gaps = 9/355 (2%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
++++YVQ++ + +M + GF+ +N++L + + ++ E K
Sbjct: 99 VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK 158
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
DV ++ + + C + E + +EL++ P+ + Y+TL K EKA
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM K N Y+ L+ G K + +++KM N Y CV++ L
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQL 278
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + A ++DE + + N L+ + A +++ + I P
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNL 338
Query: 290 TTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L G+ G++ K L + K+ G V + L++ K GD GA
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRK----GDTSGAAK 394
Query: 348 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLIIVER--MQKDNVQMDAETQKVL 399
++ + G +++ Y L+ T+A++ M I R M++ + D T VL
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 11/256 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + K+ EA +M++M + YN +++ + S G+L K + ++L
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDL 364
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + SP +VTYN+ ++ + D A K E+++ I P ++Y+ L + + +
Sbjct: 365 KSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A ME+ + YS L+ + G +E R++K M+ + N+ Y +
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR-----NQLEMAESFYNRL 280
I K G +A ++ + E PN+ +Y+ R +L+ AE ++
Sbjct: 485 ILGYCKEGSSYRALRLFRDMEE-----KELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539
Query: 281 VTKGIKPCYTTWELLT 296
+ GI P T L++
Sbjct: 540 IDSGIDPSDTICNLIS 555
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 11/312 (3%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLW 120
EA L +M E G YN M++ + S G+ ++L E+ + PDV T+N+
Sbjct: 228 EACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNIL 287
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ A + K PD +SY+ L + Y +A +M +RT
Sbjct: 288 IDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTA 347
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
N ++Y +L++ Y + DE + + +M + + Y C++ L K G ++
Sbjct: 348 LPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG---RSLY 404
Query: 241 IYDEWESISGTGDPR---VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
+D E++ +G P N+LL Y + + A + + ++ GI P T+ +L
Sbjct: 405 EWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLD 464
Query: 298 GYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
G K G+++ E F+ + S + P+ R + L ++G +D AE LL + N +
Sbjct: 465 GLCKSGRLKYAKEIFQ--LLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNY 522
Query: 358 VSTEI-YNSLLR 368
+ I +++++R
Sbjct: 523 LPNYITFDTIVR 534
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 137/337 (40%), Gaps = 13/337 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGF-LKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T S L++++ Q + A +L+ + + GF + + M L + L+ V + +
Sbjct: 107 TFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEY 166
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + D V Y + A + F ++KK ++ P+ I Y+T+ K L
Sbjct: 167 VDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLV 226
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTC 224
++A EM + + +Y+S++ + ++G +++ +M+ D +
Sbjct: 227 DEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNI 286
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L KLG +A N+ D N L+ Y + A+ ++++V +
Sbjct: 287 LIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT 346
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P ++ L GY K +++ + + + VPD T YN L + G
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEM--HNKNLVPD----TVTYNCLLDGLSKSG 400
Query: 345 AE----HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L+ +R +G + I YN LL Y K K
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKF 437
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 128/310 (41%), Gaps = 23/310 (7%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKM--RG---PD--TCSALLHSYVQNK 59
+G ++ SY + + R L D+M RG PD T + L+ +
Sbjct: 239 NGIELDVYSYNSMI---HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLG 295
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYN 118
+ +EA ++ M + G+ + YN ++N Y +G + + Q+ ++ + T+ P+V++Y
Sbjct: 296 RVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYC 355
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE---- 174
+ + A E+ + PD ++Y+ L ++ K+ +L E
Sbjct: 356 TLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCL------LDGLSKSGRSLYEWDLV 409
Query: 175 --MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
M + + Y+ LL Y D+ L +++ ++ + N Y ++ L K
Sbjct: 410 EAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKS 469
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
G + A+ I+ + + R NI++ L+ AE+ ++V P Y T+
Sbjct: 470 GRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITF 529
Query: 293 ELLTWGYLKK 302
+ + L K
Sbjct: 530 DTIVRAILVK 539
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 155/357 (43%), Gaps = 6/357 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++ S ++ A +L ++M G + YN ++ G+ + Q+L+++
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM 266
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P+V+T+N+ + + + A + + E+ I P+ I+Y++L Y
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRL 326
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L M + C + V ++SL+ Y + DE +++++K+ N Y+ +
Sbjct: 327 SEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSIL 386
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ + G+ E AE ++ E S+ D ILL + +LE A + L +
Sbjct: 387 VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ ++ G K G++E F + P+ T + L ++G + A
Sbjct: 447 NLDIVMYTIIIEGMCKGGKVEDAWNLFCSL--PCKGVKPNVMTYTVMISGLCKKGSLSEA 504
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
LL + G+ + YN+L+R + + G + ++E M+ DA + K++
Sbjct: 505 NILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 561
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 154/350 (44%), Gaps = 6/350 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +++ + + K+ A +++ K+ + G+ +N ++N ++ + ++ +
Sbjct: 102 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARM 161
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+N P+VVTYN + D A ++ + + D +YST+ +
Sbjct: 162 VENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCI 221
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A + KEME + + + V Y+SL+ G ++ +++ K M S N + +
Sbjct: 222 DAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I VK G+ ++A +Y E + + + N L+ Y +N+L A + + +V
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L GY K ++++ ++ F+K S R V + + + G ++ A
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKI--SKRGLVANTVTYSILVQGFCQSGKLEIA 399
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
E L + + G + Y LL GK+ L I E +QK + +D
Sbjct: 400 EELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 139/339 (41%), Gaps = 40/339 (11%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+AL++ +++ A L+E+M+ G+ + YN +L+ G++ + Q +
Sbjct: 84 NALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 143
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAF--LELKKTKIDPDWISYSTLTSLYIKMELP 165
+ SPDVV YN L A + A F +++ K+ PD I+Y+TL + ++E
Sbjct: 144 RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKT 203
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A K++ + + V Y+S+L DE ++KKM+ N A Y+ V
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIV 263
Query: 226 ISSLVKLG-----------------------------------EFEKAENIYDEWESISG 250
+S ++G + + A + +E I
Sbjct: 264 LSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGA 323
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D NILL N ++ A ++ +V G P ++ ++ G K ++
Sbjct: 324 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 383
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
F + I RK VPD + L + G +D A+ LL
Sbjct: 384 LFDRMIE--RKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 144/346 (41%), Gaps = 4/346 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+++ K PDT + ++L + EAE + +KM + G Y+ +L+ +
Sbjct: 209 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHC 268
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + ++ +E+ +K SPDV+ N + + A K E+ K PD +
Sbjct: 269 RVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVV 328
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L K L +KA M C + V+YS +L+ + ++ +M
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + + ++ L K G+ ++A+++ D + D L+ +
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
+ A + +V KG ++ G ++G++ + L FK + S ++ PD T
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
N L E G +D A + +G + YN+L+ K G+
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGR 554
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 146/341 (42%), Gaps = 41/341 (12%)
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQND 129
M+E GF + Y+ +++ G++ + +M++E+ +K +PDV TY + +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
+ A++ F ++ + + ++Y+ L + K E E+A L+EM + + + Y++
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 190 LLSLYTNMGYKDEVLRIWKKMMS----------------------------LFAKMNDAE 221
+LS MG E + + M S LF M+ A+
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 222 ---------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
Y +I ++ + ++A ++ + + D N +L ++ ++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
AE + ++V G P T+ ++ G+ + G M + LE +++ + +++ PD L A
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM--TEKRFSPDVLLCNAV 298
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ L + +D A +L + G V + YN LL K
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 27/254 (10%)
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
AEK F +PD ++YST+ S K +A ++EM ++ + Y+ ++
Sbjct: 2 AEKGF--------EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVD 53
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
G DE ++ KM+ N Y +I+ L K E+A + +E S
Sbjct: 54 RLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEP 113
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N +L+ ++ A+ F++ + ++G P + L K+G++ + F
Sbjct: 114 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLF 173
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG---------AEHLLVTLRNAGHV-STEI 362
K + RK PD LIT YN L IDG A L + G++ T
Sbjct: 174 KTMDMADRKVAPD--LIT--YNTL-----IDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224
Query: 363 YNSLLRTYAKAGKM 376
YNS+L A+ M
Sbjct: 225 YNSILLGLARKSNM 238
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 159/364 (43%), Gaps = 10/364 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
D L+ SY + E+ + +KM E G + Y+ + + + G+ +
Sbjct: 188 DLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNA 247
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L + P TYN+ + ETA + F E+K+ +I PD ++Y+T+ + Y +++
Sbjct: 248 MLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKK 307
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E+A EM+ R ++Y++++ Y ++G D+ LR++++M S K N Y+
Sbjct: 308 MEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYST 367
Query: 225 VISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
++ L + +A+N+ E E D + L+ QL+ A ++
Sbjct: 368 LLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRL 427
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL--ITAAYNKLEE--- 338
I + +L + K G ++ ++ K I P + L ++ YN + E
Sbjct: 428 SIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLC 487
Query: 339 -QGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAET 395
G AE L L G +N+L+R ++K G + I++ M + V +A+
Sbjct: 488 NSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADA 547
Query: 396 QKVL 399
++L
Sbjct: 548 YRLL 551
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 163/374 (43%), Gaps = 28/374 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ + + K A E+M E + YN M+N Y ++++ + E+
Sbjct: 259 TYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEM 318
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K +N P V++Y + S + + F E+K I P+ ++YSTL E
Sbjct: 319 KGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKM 378
Query: 166 EKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A +KEM E+ K+ + L++ G D + K M+ L Y
Sbjct: 379 LEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGV 438
Query: 225 VISSLVKLGEFEKAENIYD---EWESI-----SGTGDPRVPNILLAAYINRNQLEMAESF 276
+I + K G +++A + D E E I S + N+++ N Q AE+
Sbjct: 439 LIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETL 498
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD----HRLITAA 332
+ +L+ KG++ + L G+ K+G E E K +G R+ VP +RL+ +
Sbjct: 499 FRQLMKKGVQDP-IAFNNLIRGHSKEGAPESAFEIL-KIMG--RREVPREADAYRLLIES 554
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI------IVERMQ 385
+ K E D A+ L + GH+ + ++ S++ + + G++ +VE+
Sbjct: 555 FLKKGEPAD---AKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGV 611
Query: 386 KDNVQMDAETQKVL 399
K+N+ + A+ + L
Sbjct: 612 KENMDLVAKILEAL 625
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 135/346 (39%), Gaps = 19/346 (5%)
Query: 25 ALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
+L+ FFE + ++ PD T + +++ Y + KK EAE +M +
Sbjct: 270 SLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVIS 329
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y M+ Y+S G++D ++ +E+K P+ VTY+ L A+ E+
Sbjct: 330 YTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMV 389
Query: 142 KTKIDP-DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ I P D + L + K + AA LK M + + Y L+ + G
Sbjct: 390 ERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVY 449
Query: 201 DEVLRIWKKMM----------SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
D +++ K++ SL +M + Y +I L G+ KAE ++ + G
Sbjct: 450 DRAVKLLDKLIEKEIILRPQNSL--EMESSGYNLIIEYLCNSGQTSKAETLFRQLMK-KG 506
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
DP N L+ + E A + + + + LL +LKKG+
Sbjct: 507 VQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKT 566
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
I + +PD L + L E G I A ++ + G
Sbjct: 567 ALDGMIEN--GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKG 610
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 6/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + + GQ KV ++ E+ + + PD +TY+ ++A +++A + E+
Sbjct: 197 YNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEM 256
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+ L +L+ K++ A + +EM + CR + Y+ L+ G
Sbjct: 257 KENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-I 259
DE + +M + + +I+ L K G + A ++ E ++ N I
Sbjct: 317 DEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTI 376
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ A + ++++ S++ R+ GI P T+ +L G+ K +MEK + ++
Sbjct: 377 IKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM--DE 434
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + + L + D A L L+ N G S +Y +++ KAG++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 492
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 7/346 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + + PD T + L+ + + EA +M G + N+M+N
Sbjct: 286 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFL 345
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPD 148
G+LD ++ QE+ P VVTYN + A + + ++ E +K++ I P
Sbjct: 346 GKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 405
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS L + K EKA L+EM+++ AY SL+ D +++
Sbjct: 406 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 465
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
++ + Y +I L K G + A N++DE + D N L++
Sbjct: 466 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTG 525
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
L+ A S R+ G P ++ ++ G K G + +E S + PD
Sbjct: 526 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR--PDVVS 583
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
L G + A L+ + G I Y+S+L K
Sbjct: 584 YNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKV 629
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 136/329 (41%), Gaps = 17/329 (5%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y+ +++ + G+ D Q+L E+K+N P Y + + +D A F E
Sbjct: 231 MTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEE 290
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++ PD +Y+ L K ++A EM++ CR + V +++++ G
Sbjct: 291 MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGR 350
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG---DPRV 256
D+ ++++++M +L + Y +I +L + +A + +E + +G
Sbjct: 351 LDDAMKLFQEMGTLRCIPSVVTYNTIIKALFE--SKSRASEVPSWFERMKESGISPSSFT 408
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF---K 313
+IL+ + N++E A + KG PC + L K + + E F K
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
+ GS R+ L + G +D A ++ + G YN+L+ A+
Sbjct: 469 ENCGS-----SSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523
Query: 373 AGKM--PLIIVERMQKDNVQMDAETQKVL 399
G + L + RMQ+ D + ++
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNII 552
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 9/239 (3%)
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCV 225
KA +++ R C+ AY+S++ + + G +V ++ +M + D Y+ +
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSAL 236
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ KLG + A + +E + ++ +L+ + + + A S + + +
Sbjct: 237 ISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYC 296
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P T+ L G K G++++ F + PD ++ N L + G +D A
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFFYEM--QREGCRPDTVVMNNMINFLGKAGRLDDA 354
Query: 346 EHL---LVTLRNAGHVST--EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L + TLR V T I +L + ++A ++P ERM++ + + T +L
Sbjct: 355 MKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWF-ERMKESGISPSSFTYSIL 412
>gi|156070758|gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 24/255 (9%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK- 141
++H L +Y Q+D + T +++N+ L+AC + + F E+
Sbjct: 116 FDHALKIY---HQMDDL---------GTPRSAISFNVLLSACMHSKLYDRVAQLFDEIPV 163
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K PD +SY L Y +M LPE A KEME++ VA++++L + G D
Sbjct: 164 KYGFLPDKVSYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTTILHSFYKKGKSD 223
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPN 258
E R+W +M+S + Y I ++ + K E + E +S G D N
Sbjct: 224 EAERVWNEMVSRGCGPDVGAYNVKIMNI----QGSKPEGVKALIEEMSNAGLKPDTISYN 279
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
L+ Y ++ A+ Y L T G P T+ L + KKG+ E + F++++ S
Sbjct: 280 YLMTCYCKNQLMDEAQKVYEDLKTNGCNPNAATFRTLIFYLCKKGRFETGYKVFRESV-S 338
Query: 319 VRKWVPDHRLITAAY 333
V K +PD IT Y
Sbjct: 339 VHK-IPD--FITLKY 350
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 15/230 (6%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPDK+ + L+ SY + A ++M E G + + +L+ + G+ D
Sbjct: 168 LPDKV----SYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTTILHSFYKKGKSD 223
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPDWISYSTL 155
+ ++ E+ + PDV YN+ + Q K KA +E + + PD ISY+ L
Sbjct: 224 EAERVWNEMVSRGCGPDVGAYNVKIMNI--QGSKPEGVKALIEEMSNAGLKPDTISYNYL 281
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+ Y K +L ++A ++++ C N + +L+ G + +++++ +S+
Sbjct: 282 MTCYCKNQLMDEAQKVYEDLKTNGCNPNAATFRTLIFYLCKKGRFETGYKVFRESVSVHK 341
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+ ++ LVK + A+ +S T + P L+ A+I
Sbjct: 342 IPDFITLKYLVEGLVKKSRWRDAKG-------MSRTVKKKFPPNLVKAWI 384
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 161/361 (44%), Gaps = 10/361 (2%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T A++ + + ++ EAEAL E++ E G YN +L Y+ G L ++
Sbjct: 276 PSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVS 335
Query: 105 ELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E++K PD TY+L + A E+A E++ + + P+ +S + + Y
Sbjct: 336 EMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKG 395
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+K+ LK+M+ + +R Y+ ++ + D + +++M+S + +
Sbjct: 396 EWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWN 455
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I K G + AE ++ E + + NI++ + + + E +F +++ ++
Sbjct: 456 TLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQ 515
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G++P T+ L Y K G+ +EC + K+ G + P + A N ++G
Sbjct: 516 GLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG----FKPTSTMYNALINAYAQRGL 571
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKV 398
+ A + + G + + NSL+ + + +++ M+++N++ D T
Sbjct: 572 SELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTT 631
Query: 399 L 399
L
Sbjct: 632 L 632
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 3/232 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + + PD T + L+ + ++ + AE L +M + G+ C YN M+N
Sbjct: 439 FERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGE 498
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ ++V L +++ + P+ +TY + A + LK T P
Sbjct: 499 QQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTM 558
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L + Y + L E A + M + +A +SL++ + E + + M
Sbjct: 559 YNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMK 618
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ + YT ++ +L+++ +F+K +Y+E + T D + +L +A
Sbjct: 619 ENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARAMLRSA 670
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 115/291 (39%), Gaps = 9/291 (3%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI---KMELPEKAATT 171
+TYN + ACA D E A ++++ PD+++YS++ K++ P
Sbjct: 170 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSP-ILQKL 228
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
E+E + + ++ ++ G +R S + VI +L
Sbjct: 229 YAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGN 288
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G +AE +++E R N LL Y+ L+ AE + + G+KP T
Sbjct: 289 SGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQT 348
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ LL Y G+ E K+ S + P+ + + ++G+ + +L
Sbjct: 349 YSLLIDVYAHAGRWESARIVLKEMEASNVQ--PNSYVFSRILANYRDKGEWQKSFQVLKD 406
Query: 352 LRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
++++G YN ++ T+ K + + ERM + + D T L
Sbjct: 407 MKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTL 457
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/301 (17%), Positives = 119/301 (39%), Gaps = 8/301 (2%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQN--DKETAEKA 136
PL YN ++ NG ++K ++ +++++ PD V Y+ + N D +K
Sbjct: 169 PLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKL 228
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ E++ KI+ D + + + K P +A L + +++ N
Sbjct: 229 YAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGN 288
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G E +++++ + Y ++ V+ G + AE + E E D +
Sbjct: 289 SGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQT 348
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++L+ Y + + E A + ++P + + Y KG+ +K + K
Sbjct: 349 YSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMK 408
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
S + PD + + +D A + + G + +I +N+L+ + K+G
Sbjct: 409 SSGVQ--PDRHFYNVMIDTFGKYNCLDHAMATFERMLSEG-IPPDIVTWNTLIDCHCKSG 465
Query: 375 K 375
+
Sbjct: 466 R 466
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T +L++ + + + ++A +L++KM E G+ + YN +++ +++
Sbjct: 153 PDRV----TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+E+ +K P+VVTY + + + A + ++ K KI P+ I+YS L
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++K +A +EM + + + V YSSL++ DE +++ M+S
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I+ K E ++ E + N L+ + ++ A+ F+
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+++ GI P T+ +L G G++EK L F+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 156/356 (43%), Gaps = 13/356 (3%)
Query: 4 RRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKS 61
R G+ V R RV+ A +L + E ++ PD + A++ S + K+
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK--------PDIVAYNAIIDSLCKTKRV 206
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLW 120
+A +++ G + Y ++N ++ + ++L + +KK +P+V+TY+
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L A A++ F E+ + IDPD ++YS+L + + ++A M + C
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ V+Y++L++ + ++ ++++++M N Y +I + G+ +KA+
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ + + + D NILL + +LE A + + + + T+ + G
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
K G++E+ F S++ PD T + L +G + E L ++ G
Sbjct: 447 KTGKVEEAWSLFCSL--SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 16/354 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
LL + V+ KK +L +KM G +N ++N + Q+ +L + LK
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD VT + +N A ++ + PD ++Y+ + K + A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
KE+E++ R N V Y++L++ N + R+ M+ N Y+ ++ +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
VK G+ +A+ +++E +S D + L+ ++++ A ++ +V+KG
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL----EEQGDIDGA 345
++ L G+ K ++E ++ F++ S R V + T YN L + GD+D A
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVSN----TVTYNTLIQGFFQAGDVDKA 384
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
+ + G +S +I YN LL G++ L+I E MQK + +D T
Sbjct: 385 QEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 172/378 (45%), Gaps = 16/378 (4%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y ++ +AEA+ +M + G + YN ++ + G K ++
Sbjct: 191 DTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHR 250
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ P TY + + ++ A+ F E++ + P+ +++ L + + L
Sbjct: 251 MKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGL 310
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA ++M++ + AY++L+ Y+ G+ I+ M + + + A Y
Sbjct: 311 CEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 370
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E A+ +++E + I T + +LL+AY + + E ++ G
Sbjct: 371 MVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSG 430
Query: 285 IKP-CYTTWELLT-WGYLKK-GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+KP + +L +G L + G+ME + +K G R + + ++ Y + G
Sbjct: 431 LKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQK--GPCRADISTYNILINVYGR---AGF 485
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQK 397
++ E L L A ++ ++ + S + Y+ K K L + E+M D T K
Sbjct: 486 VERMEELF-QLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAK 544
Query: 398 VL--KITSEMPVSEVSSI 413
VL +SE + +V+++
Sbjct: 545 VLLSACSSEEQIEQVTNV 562
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 132/333 (39%), Gaps = 44/333 (13%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K PDV+ YNL + A ++ + E +LEL ++ P +Y+ L Y K L E
Sbjct: 148 KSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLE 207
Query: 167 KAATTLKEMEK-----------------------------------RTCRKNRVAYSSLL 191
KA EM K C+ Y+ L+
Sbjct: 208 KAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLI 267
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
++Y I+ +M + K N +T ++++L + G EKAE I+++ +
Sbjct: 268 NVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYE 327
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
D N L+ +Y A ++ + G +P ++ ++ Y + G E
Sbjct: 328 PDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAV 387
Query: 312 FK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
F+ K IG + + H L+ +AY+ G++ E ++ + +G T + NS+L
Sbjct: 388 FEEMKRIG-ITPTMKSHMLLLSAYS---SAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLN 443
Query: 369 TYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
Y + G+ + + MQK + D T +L
Sbjct: 444 LYGRLGQFGKMEDLFSTMQKGPCRADISTYNIL 476
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 107/243 (44%), Gaps = 3/243 (1%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE + + PD + AL+ SY + A + M G YN M++
Sbjct: 315 EEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 374
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + + +E+K+ +P + ++ L L+A +S + E ++ K+ + PD
Sbjct: 375 YGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPD 434
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++ +LY ++ K M+K CR + Y+ L+++Y G+ + + +++
Sbjct: 435 TFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQ 494
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ + + + +T I + + +++ ++++ D +LL+A +
Sbjct: 495 LLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEE 554
Query: 269 QLE 271
Q+E
Sbjct: 555 QIE 557
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 17/365 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 101
PD TCS++L+ + ++ K EA L +M E G + Y ++N L+ S ++
Sbjct: 354 PDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNL 413
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q + + S D+VT + + AE+ F + K + P+ ++YS L Y K
Sbjct: 414 QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 473
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E A L++MEK N + +SS+++ Y G + + + ++M+ N
Sbjct: 474 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 533
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I K GE + A++ E +S + +ILL +++ A S +
Sbjct: 534 YAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMY 593
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ-- 339
+KGI P + L GY K+G L ++ + R AYN L +
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK------NIRFDVVAYNALIKGLL 647
Query: 340 --GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAE 394
G D ++ + G I YN+++ TY GK L I+ M+ + +A
Sbjct: 648 RLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAV 706
Query: 395 TQKVL 399
T +L
Sbjct: 707 TYNIL 711
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 147/350 (42%), Gaps = 42/350 (12%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
+N +L + +L + Q KN P +VTY +AA E + + ++
Sbjct: 290 FNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM 349
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
I PD ++ S++ + + +AA +EM + N V+Y+++++ G E
Sbjct: 350 NGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 409
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ +M+ + T V+ L K+G+ ++AE +++ ++ + + LL
Sbjct: 410 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
Y ++E+AE ++ + + P T+ + GY KKG + K ++ ++ + R
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ--RNV 527
Query: 323 VPD---HRLITAAYNKLEEQ--------------------------------GDIDGAEH 347
+P+ + ++ Y K EQ G +D A
Sbjct: 528 MPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS 587
Query: 348 LLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDA 393
L++ + + G + +I Y SL+ Y K G L IV+ M++ N++ D
Sbjct: 588 LIIDMYSKG-IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV 636
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 177/464 (38%), Gaps = 117/464 (25%)
Query: 27 QTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
+T+ E FE + P+ T SALL Y + K AE +++KM + + ++
Sbjct: 441 KTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFS 500
Query: 85 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++N Y G L K +L+E+ ++N P+ + Y + + +++ A+ E+K
Sbjct: 501 SIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSR 560
Query: 144 K-----------------------------------IDPDWISYSTLTSLYIKMELPEKA 168
+ IDPD ++Y++L Y K A
Sbjct: 561 RLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAA 620
Query: 169 ATTLKEMEKRTCRKNRVAYSSLL----------------------------------SLY 194
+ ++EM+++ R + VAY++L+ + Y
Sbjct: 621 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTY 680
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF----------------EKA 238
G ++ L I +M S N Y +I L K G EKA
Sbjct: 681 CIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKA 740
Query: 239 ENIYDEWESISGTG--------------------DPRVPNILLAAYINRNQLEMAESFYN 278
+ I E + +G D N L+ Y + +E A Y+
Sbjct: 741 DKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYS 800
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV--RKWVPD---HRLITAAY 333
++ GI P TT+ L G G ME+++E +K + + R VP+ + ++ + Y
Sbjct: 801 QMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 860
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
++ G+ L + + G V T + YN L+ YAK+GKM
Sbjct: 861 GRV---GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKM 901
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 47/275 (17%)
Query: 70 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACA--- 125
+M E G + YN ++N Y G+ + +L E+K P+ VTYN+ +
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719
Query: 126 -------------SQNDKETAEKAF----------LELKKTK----------IDPDWISY 152
+ + E A+K LELK+ K I D ++Y
Sbjct: 720 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTY 779
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L Y EKA T +M N Y++LL +N G +E++ +K++S
Sbjct: 780 NALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVS 839
Query: 213 LFAKMND-------AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+MN+ A Y ++S ++G +K ++ E + + N+L++ Y
Sbjct: 840 ---EMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 896
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
++ A N L+TKG P T+++LT G+L
Sbjct: 897 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 931
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 3/297 (1%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
+ +N ++ G+++ + +++ SP+V+TY++ + N A + +
Sbjct: 80 ISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESM 139
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K PD I+Y+ L K A L+EM C N V Y+SLL
Sbjct: 140 KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRV 199
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+ L + + M N Y +I L K+G + A + + GT D + N+L
Sbjct: 200 SDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNML 259
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ +Q++ + + R V+ GIKP T+ + +G + ++++ C R
Sbjct: 260 INGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA--CRLLLYVKSR 317
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
PD L + + L + G +D A L + G Y++L+ KAG++
Sbjct: 318 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRV 374
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 3/258 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
L+ + + +A A++ M + G + YN ++N Q+D+ +L+ +
Sbjct: 222 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 281
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PDVVTY+ + N + A + L +K PD I YSTL K ++
Sbjct: 282 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 341
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M C + V YS+L+ G DE + +M+ + + Y +I
Sbjct: 342 AFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 401
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE-SFYNRLVTKGIK 286
L L ++A + +E E + NIL+ +++ A ++ ++ G+
Sbjct: 402 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVI 461
Query: 287 PCYTTWELLTWGYLKKGQ 304
P + T+ +L G LKK +
Sbjct: 462 PDHITYSILLEG-LKKSK 478
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 104/266 (39%), Gaps = 42/266 (15%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
++LLH + ++ ++A ALM M+ G + Y +++ G++ ML + +
Sbjct: 187 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 246
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K +PD++ YN+ + + + + I PD ++YS++ + ++
Sbjct: 247 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 306
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L ++ R C + + YS+L I
Sbjct: 307 ACRLLLYVKSRGCPPDVILYSTL-----------------------------------ID 331
Query: 228 SLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
L K G+ ++A +D +E ++G G D + L+ +++ A R+V G
Sbjct: 332 GLCKAGKVDEA---FDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
P T+ L G +++ +E
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIE 414
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 134/302 (44%), Gaps = 13/302 (4%)
Query: 29 RAREN--FFENLPDKMRGP--DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
R RE FF+++ K P T L+H Y +E + ++ M E G P +
Sbjct: 319 RCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLS----PDH 374
Query: 85 HMLNLYISN----GQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLE 139
H+ N++ S G +DK + +++++ SP+VV Y + A + AE F +
Sbjct: 375 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 434
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + P+ + +++L ++ E+A + EM + N V +++L+ N+G
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E R+ M + + + YT +IS G ++AE ++D SI + N
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
LL Y + ++++ A + ++ KG+ P T+ + G + + + E + I S
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614
Query: 320 RK 321
K
Sbjct: 615 TK 616
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 6/283 (2%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYN 84
A + + +P+ PDT S LL K++ EA L+ M++ +CP + Y+
Sbjct: 144 AMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYS 203
Query: 85 HMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++N + + GQ+DK + E + + PDVVTY + + AE F ++
Sbjct: 204 IVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN 263
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
P+ +Y+ L Y+ + ++ L+EM R + + Y SLL+ G E
Sbjct: 264 GFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREA 323
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ M+ K + Y +I G + + D + D + NI +A
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
Y ++ A +N++ G+ P + L K G+++
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVD 426
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L+ Y ++ EAE + + M G + YN +L+ Y S ++D +
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E L+K +P VVTYN L A++ +L + + D +Y+ + + K
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A + + + + N + ++ ++ G K++ + ++ + + N
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 691
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y V +L++ G E+ ++++ E + ++ N L+ ++R + A ++ ++L
Sbjct: 692 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 750
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL-PYNHMLNLYISNGQLDKVPQM 102
G T + +LH Q K+ +EA+ L M G KC + YN +LN + +D+ +M
Sbjct: 583 GVVTYNTILHGLFQTKRFSEAKELYLNMINSG-TKCDIYTYNIILNGLCKSNCVDEAFKM 641
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q L K +++T+ + + A KE A F + + P+ ++Y + I+
Sbjct: 642 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIE 701
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
E+ + MEK N ++L+
Sbjct: 702 EGSLEEFDSLFSAMEKNGTAPNSQMLNALV 731
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 133/314 (42%), Gaps = 3/314 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DTC +L ++ K +++ ECG+ +N +++ + G++ + +
Sbjct: 102 DTCRKVLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDA 161
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ K P VV++N + D + + + + + PD +YS L + K
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A EM R N V +++L+ ++ G D + I+K+M+S + Y
Sbjct: 222 VDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNT 281
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L K G+ ++ + DE D L+ LE A F R++ +
Sbjct: 282 LIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKES 341
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I+ + L G ++G+ + + F++ + K PD+ T N+ ++GD+
Sbjct: 342 IRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLK--PDNGTYTMIINEFCKKGDVRT 399
Query: 345 AEHLLVTLRNAGHV 358
A LL ++ GHV
Sbjct: 400 ASRLLKEMQRDGHV 413
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L++ + K EA L +M + G + + + +++++ NG +D ++
Sbjct: 204 PDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEI 263
Query: 103 L-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q L + SPD++TYN + + D + E+ + PD I+Y+TL K
Sbjct: 264 YKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCK 323
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E A K M K + R + VAY++L+S G D+ +++++M+S+ K ++
Sbjct: 324 EGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGT 383
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
YT +I+ K G+ A + E + D VP ++
Sbjct: 384 YTMIINEFCKKGDVRTASRLLKEMQR-----DGHVPCVV 417
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/277 (17%), Positives = 111/277 (40%), Gaps = 36/277 (12%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++H + + + A+++ + +++ G + +N ++N YI G LD+ ++ +
Sbjct: 142 VMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 201
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLEL--------------------KKTKID--- 146
PDV TY++ + ++ + A + F E+ K +D
Sbjct: 202 VQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAM 261
Query: 147 ------------PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
PD I+Y+TL K ++ + EM + +++ Y++L+
Sbjct: 262 EIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGC 321
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G + K+M+ ++++ YT ++S L + G + AE ++ E S+ D
Sbjct: 322 CKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDN 381
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+++ + + + A + G PC T
Sbjct: 382 GTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 159/369 (43%), Gaps = 13/369 (3%)
Query: 8 GAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEA 64
G + SYR + + +TRA + + K+ D + +++S ++K ++A
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAA 123
L +M + +N ++ + GQL + + E+ KN +PDV T+++ + A
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDA 278
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
+ A+ + K + PD ++YS+L Y + KA M + +
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
+Y+ +++ + DE L ++K+M + Y +I L KLG A + D
Sbjct: 339 AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVD 398
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
E + D N L+ + ++ A + ++ +GI+P T+ +L G K G
Sbjct: 399 EMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGG 458
Query: 304 QMEKVLECFKKAI---GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
+++ + F+ + SV W + + N L ++G + AE LL + N G +
Sbjct: 459 RLKNAQDVFQDLLIKGYSVNAWTYNIMI-----NGLCKEGLFNEAEVLLSKMENNGIIPD 513
Query: 361 EI-YNSLLR 368
+ Y +++R
Sbjct: 514 AVTYETIIR 522
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 121/278 (43%), Gaps = 5/278 (1%)
Query: 97 DKVPQMLQELKKNTSPDVVTYNLWLAAC--ASQNDKETAEKAFLELKKTKIDPDWISYST 154
+ V + L+ +P +V +N L + A+ N TA +L+ I P ++++
Sbjct: 40 NDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNI 99
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L + Y + A + ++ K + +++L++ G E L +++L
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
++ Y +I+ L K+GE A + + E D + NI++ + + A
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
Y+ ++TK I P T+ L G+ GQ+++ F + + ++ PD + +
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMV--LKNINPDVYTFSILVD 277
Query: 335 KLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
L + G+I A+++L + G + + Y+SL+ Y
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYC 315
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 117/284 (41%), Gaps = 3/284 (1%)
Query: 27 QTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
Q + F + K PD T S L+ + ++ A+ ++ M + G + + Y+
Sbjct: 249 QLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYS 308
Query: 85 HMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+++ Y +++K + + + +P +YN+ + + A F E+
Sbjct: 309 SLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCK 368
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
I PD ++Y++L K+ A + EM + + Y+SL+ + + D+
Sbjct: 369 GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKA 428
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ + KK+ + + Y +I L K G + A++++ + + + NI++
Sbjct: 429 IALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMING 488
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
AE +++ GI P T+E + +K + EK
Sbjct: 489 LCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEK 532
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ +N +A AL++K+ + G YN +++ G+L + Q+L
Sbjct: 411 TYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDL 470
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K S + TYN+ + + AE +++ I PD ++Y T+ + +
Sbjct: 471 LIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDEN 530
Query: 166 EKAATTLKEMEKR 178
EKA L+EM R
Sbjct: 531 EKAEKLLREMIIR 543
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 158/388 (40%), Gaps = 37/388 (9%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
+L+ ++ +A A L KM E + Y+ +++ +G LD + E++ K
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
DVV Y+ + + + K E+ I P+ +++S L +++K +A
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM R + + YSSL+ + E ++ M+S + N Y+ +I+S
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K + ++ E S D N L+ + +L +A+ + +V++G+ P
Sbjct: 395 CKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSV 454
Query: 290 TTWELLTWGYLKKGQMEKVLECFKK--------AIG------------------------ 317
T+ +L G G+++K LE F+K IG
Sbjct: 455 VTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCS 514
Query: 318 -SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY-AKAG 374
SV+ PD L ++G + A+ L ++ G ++ YN L+R + +G
Sbjct: 515 LSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSG 574
Query: 375 KMPLI-IVERMQKDNVQMDAETQKVLKI 401
+ + ++E M+ DA T K++ +
Sbjct: 575 VISSVELIEEMKMRGFAADASTIKMVVV 602
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 168/378 (44%), Gaps = 20/378 (5%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGF 76
++++ A ++ RA + FE P+ + T S L++ + + +EA AL+++M E +
Sbjct: 117 KRKLLFAFSVVGRALKFGFE--PNTI----TFSTLINGFCLEGRVSEAVALVDRMVEMKY 170
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEK 135
+ N ++N G++ + ++ + K + +TY L + A
Sbjct: 171 RPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALD 230
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F ++++ I + YS + K + A + EME + + + VAYSS++
Sbjct: 231 LFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLC 290
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
N G D+ ++ ++M+ N ++ +I VK G+ +A+ +Y+E + D
Sbjct: 291 NDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTI 350
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+ L+ + N+L A + +V+KG +P T+ +L Y K +++ + F +
Sbjct: 351 TYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEI 410
Query: 316 IGSVRKWVPDHRLITAAYNKLE----EQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
S + V D T YN L + G ++ A+ L + + G S Y LL
Sbjct: 411 --SSKGLVAD----TVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGL 464
Query: 371 AKAGKM--PLIIVERMQK 386
G++ L I E+MQK
Sbjct: 465 CDNGELQKALEIFEKMQK 482
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T SAL+ +V+ K EA+ L +M G + Y+ +++ + +L + QML +
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P++VTY++ + + + + F E+ + D ++Y+TL + +
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A +EM R + V Y LL
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILL---------------------------------- 461
Query: 226 ISSLVKLGEFEKAENIYDEWES---ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
L GE +KA I+++ + I G G + NI++ N ++++ A S + L
Sbjct: 462 -DGLCDNGELQKALEIFEKMQKSRMILGIG---IYNIIIHGMCNASKVDDAWSLFCSLSV 517
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
KG+KP T+ ++ G KKG + + F+K
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 124/253 (49%), Gaps = 5/253 (1%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYN 118
K +A+A++++M G + YN +++ + + + ++ E+++ P+VVTYN
Sbjct: 208 KMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYN 267
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + S + A ++ + ++P+ ++++ L + + K + +A +MEK+
Sbjct: 268 ILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ 327
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM--SLFAKMNDAEYTCVISSLVKLGEFE 236
N + Y++L+ Y G ++ ++ M+ +F ++ + Y C+I+ L + G+ +
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEV--STYNCLIAGLCRKGDVK 385
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
A ++ +E S + D NIL+ + + + A + + KG+ P + T+ L
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445
Query: 297 WGYLKKGQMEKVL 309
GY ++G + L
Sbjct: 446 DGYCREGNLRAAL 458
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 147/340 (43%), Gaps = 27/340 (7%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI---SNGQLDKVPQMLQELK 107
L+ ++V+N K ++ + GF + N +L+ + NG ++ V + + +K
Sbjct: 91 LVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYR--EMIK 148
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +V+++N+ + A ++K + P+ I+Y+TL Y KM K
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGK 208
Query: 168 ---AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE----VLRIWKKMMSLFAKMNDA 220
A LKEM + N V Y+ L+ + KDE +R++ +M + N
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFC----KDENVSGAMRVFGEMQRQGLRPNVV 264
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV--PNILLAAYINRNQLEMAESFYN 278
Y +I+ L G+ ++A + D+ +S +P V N+L+ + + A + +N
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQM--VSSDLEPNVVTHNVLINGFCKNKTVNEAINLFN 322
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+ +G+ P T+ L Y K G+ME + I R P+ L
Sbjct: 323 DMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID--RGIFPEVSTYNCLIAGLCR 380
Query: 339 QGDIDGAEHL---LVTLRNAGHVSTEIYNSLLRTYAKAGK 375
+GD+ A L +V+ + + V T YN L+ + K G+
Sbjct: 381 KGDVKAARSLMNEMVSKKLSADVVT--YNILIDSLCKKGE 418
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 1/261 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QE 105
T + L+ + +++ + A + +M G + YN ++N S+G++D+ + Q
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + P+VVT+N+ + A F +++K +DP+ ++Y+TL Y K
Sbjct: 290 VSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRM 349
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A M R Y+ L++ G + +M+S + Y +
Sbjct: 350 EDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNIL 409
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I SL K GE KA + DE N L+ Y L A R+ KG
Sbjct: 410 IDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK 469
Query: 286 KPCYTTWELLTWGYLKKGQME 306
+ T +L G+ KG++E
Sbjct: 470 QANVVTHNVLIKGFCLKGRLE 490
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 107/258 (41%), Gaps = 1/258 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + K EA AL ++M + +N ++N + N +++ + ++
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ P+ +TY + A E A + + I P+ +Y+ L + +
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A + + EM + + V Y+ L+ G + +++ +M + Y +
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ + G A + E + N+L+ + + +LE A N ++ +G+
Sbjct: 445 MDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGL 504
Query: 286 KPCYTTWELLTWGYLKKG 303
P TT+E++ ++KG
Sbjct: 505 VPNRTTYEIIKEEMMEKG 522
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 121/270 (44%), Gaps = 7/270 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ----MLQ 104
+AL+ SY + K AEA+ +M G + Y +L ++ + + + +L
Sbjct: 121 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 180
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
E K PD Y++ + + E A K F + + ++Y++L S +
Sbjct: 181 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK- 239
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ + +M++ + + V+Y+ L+ Y ++E L ++++M+ + Y
Sbjct: 240 --EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 297
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + G E+A+ ++ D +L+AY+N + +E AE F+ R+ G
Sbjct: 298 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 357
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+P T+ L GY K +EK++E ++K
Sbjct: 358 FEPNIVTYGTLIKGYAKANDVEKMMEVYEK 387
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 19/309 (6%)
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDK 130
SE FL Y + N NG ++V +L K ++P+V++Y + +
Sbjct: 80 FSEIDFLMLITAYGKLGNF---NGA-ERVLSVLS--KMGSTPNVISYTALMESYGRGGKC 133
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYI---KMELPEKAATTLKEMEKRTCRKNRVAY 187
AE F ++ + +P I+Y + ++ K + E+ TL + +K + ++ Y
Sbjct: 134 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 193
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
++ +Y G ++ +++ M+ + Y ++S E K IYD+ +
Sbjct: 194 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQR 250
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D +L+ AY + E A S + ++ G++P + + +L + G +E+
Sbjct: 251 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 310
Query: 308 VLECFKKAIGSVR--KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
FK S+R + PD T + D++GAE ++ G + Y
Sbjct: 311 AKTVFK----SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 366
Query: 365 SLLRTYAKA 373
+L++ YAKA
Sbjct: 367 TLIKGYAKA 375
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 42/283 (14%)
Query: 32 ENFFENLPDKMRGP-----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
E FE L D+ + P +++ Y + +A + M G + + YN +
Sbjct: 172 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 231
Query: 87 LNLYISNGQLDKVPQMLQELKKNTSPDVVTY----------------------------- 117
++ S ++ K+ +Q + + PDVV+Y
Sbjct: 232 MSFETSYKEVSKIYDQMQ--RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 289
Query: 118 ------NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
N+ L A A E A+ F +++ +I PD SY+T+ S Y+ E A
Sbjct: 290 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 349
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
K ++ N V Y +L+ Y ++++ +++KM K N T ++ + +
Sbjct: 350 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 409
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
F A Y E ES D + N+LL+ +++LE A+
Sbjct: 410 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 452
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 22/285 (7%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAE---KAFLELKKTKID--------PDWISYST 154
L + PDVVTY + A A + D E AE + LE + ++ P+ ++Y+T
Sbjct: 234 LARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTT 293
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L + Y E + L+ ME+ N + Y+ L++ YT G + ++M+S +
Sbjct: 294 LMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAY 353
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
N YT ++ + G AE + E+ L+ Y R ++E A+
Sbjct: 354 VAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAK 413
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
R+ G+ P ++ L Y+ G + + ++ + PD L YN
Sbjct: 414 GVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR---REAEAYPDFPLT---YN 467
Query: 335 KL----EEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG 374
L ++GD+ GAE +L +R G E ++LL YA+AG
Sbjct: 468 TLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAG 512
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM--SECG---------FLKCPLPYNHM 86
LPD + T + L+H+Y + AEA++ +M E G L + Y +
Sbjct: 239 LPDVV----TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTL 294
Query: 87 LNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+ Y + G ++ +L+ +++ +P+V+TY + + A + D + AE + +
Sbjct: 295 MTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYV 354
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P+ +Y+TL Y A L ME + +++L+++Y G +
Sbjct: 355 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 414
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+ +M + + ++++ V G+ AE + E+ + P N L+ Y
Sbjct: 415 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYA 474
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
++ + AE R+ KG+ P TT L Y + G
Sbjct: 475 DKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 513
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ PD ++ T+ +Y PE A L + R + V Y++L+ Y G +
Sbjct: 203 LSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAE 262
Query: 205 RIWKKMMS-----------LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
+ ++M+ L N YT ++++ G+ E +E + + E +
Sbjct: 263 AVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPN 322
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+L+ AY R ++ AE R+++ + P T+ L Y G E
Sbjct: 323 VMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLA 382
Query: 314 K--AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
+ A G + + L+T +G+++ A+ +L + AG T + +++LL Y
Sbjct: 383 RMEAAGVLPTALTFATLMTV----YAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAY 438
Query: 371 AKAGKM 376
AG +
Sbjct: 439 VVAGDV 444
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y + A+ ++ +M G + ++ +LN Y+ G + Q+L+
Sbjct: 395 TFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRR 454
Query: 107 KKNTSPDV-VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD +TYN + A + D AE ++ + PD + STL Y + P
Sbjct: 455 EAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDP 514
Query: 166 EKAATTL 172
A L
Sbjct: 515 LGAEAVL 521
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 168/410 (40%), Gaps = 69/410 (16%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
R+++ QA TR F +P ++R D +A+L + + AE M +M +
Sbjct: 51 RISKFQA--TRC----FWEMPAELRSEDAYTAMLQVFARWHAIPAAEDTMSEMKSLNLIT 104
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAA---CASQNDKETAE 134
PYN ML++Y + DKV M EL +PD TY + L A + E
Sbjct: 105 RVEPYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEAEV 164
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ FL+ E+ T R+ Y +L +Y
Sbjct: 165 RKFLD------------------------------------EQLTSRQPLFIYECMLRIY 188
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
T + + + ++ F K + + Y C++ S +LGE E+AE +++E G+
Sbjct: 189 TLLRDLAAIENLRSILLKTFKKFSSSSYNCLLDSYRQLGEVERAERLFNE------IGNK 242
Query: 255 RVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
NI ++A Y + ++E A Y +L G + + + GY+ L
Sbjct: 243 FTLNIQSYRAMIAVYASNGRMEKANELYKQLFRAGFECHPAIYHAMVAGYIDARDHSNAL 302
Query: 310 ECFKKA-----IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIY 363
+ KA +G + P L EQGD AE ++ L+ S E+Y
Sbjct: 303 IQYGKAWDRSLLGHPK---PLRATTLLVLRVLAEQGDFSRAESIVRDLKRERQGSDVEVY 359
Query: 364 NSLLRTYAKAGKMPLIIVE-RMQKDNVQMDAETQKVLKITSEMPVSEVSS 412
N LL+ Y KA ++P+ + RM V+ + E+ ++L+ + +P +V S
Sbjct: 360 NWLLKAYIKA-EVPVFGFDGRMLAAGVRPNDESLELLRRIN-LPAKKVES 407
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 151/331 (45%), Gaps = 14/331 (4%)
Query: 42 MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY---NHMLNLYISNGQLDK 98
M + SALL YV+NKK EA ++ +M E +KC L N M+++Y G +
Sbjct: 117 MPNASSYSALLTMYVENKKFLEALSVFAEMRE---IKCLLDLTTCNIMIDVYGQLGMAKE 173
Query: 99 VPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ ++K P+VV+YN L A F +++ I+ + ++Y+++
Sbjct: 174 ADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMM 233
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+Y K EKA ++EM+ R N + YS+++S++ +G D +++K+ + ++
Sbjct: 234 IYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEI 293
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ + +I + + G A+ + E + +IL A ++E A +
Sbjct: 294 DQILFQTMIXAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVF 349
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
+ + G T +E + + K + V+E F K G + PD +I N
Sbjct: 350 RQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMYG--LGYFPDSNVIALVLNAYG 407
Query: 338 EQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 367
+ + D A + + +++ G V S E++ +L
Sbjct: 408 KLHEFDKANEVYMEMQDVGCVFSDEVHFQML 438
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/290 (17%), Positives = 128/290 (44%), Gaps = 7/290 (2%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+K SPD TY+ + + + A ++++ ++ D + YS L L K+
Sbjct: 8 EKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 67
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA + +++ + VAY+++++++ + + +M + N + Y+ ++
Sbjct: 68 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASSYSALL 127
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ V+ +F +A +++ E I D NI++ Y + A+ + + GI+
Sbjct: 128 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 187
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFK-KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P ++ L Y + + F+ ++ + V + + Y K E + A
Sbjct: 188 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH---EKA 244
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMD 392
+L+ ++N G I Y++++ + K GK+ ++ ++++ V++D
Sbjct: 245 NNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEID 294
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC ++ Y + EA + KM E G P+ +N ++ Y+ D V + L +
Sbjct: 258 TCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLM 317
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PDVVTY+ + A +S + E+ F ++ K +I+PD +YS L Y++ P
Sbjct: 318 EEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQP 377
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA L M K + N V +++++S + G D LR+++KM + +N Y +
Sbjct: 378 DKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETL 437
Query: 226 I 226
I
Sbjct: 438 I 438
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 119/268 (44%), Gaps = 4/268 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ N+ V++ ++ + A F L + P I+Y+TL + +++
Sbjct: 35 MGSNSCQTVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRF 94
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ L ++E+ + + + ++++++ +++ G E ++I++KM K + + +
Sbjct: 95 NSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTL 154
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDP--RVPNILLAAYINRNQLEMAESFYNRLVTK 283
I +G +A + E G P R NIL+ A+ +N+LE A + +++V
Sbjct: 155 IKGFGIVGRPHEAMKLL-EMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNS 213
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G++P T+ L + + G+ + K K P+ R ++G++
Sbjct: 214 GMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMT 273
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTY 370
A L ++ G H + ++NSL++ Y
Sbjct: 274 EALRFLYKMKELGVHPNPVVFNSLIKGY 301
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/256 (17%), Positives = 111/256 (43%), Gaps = 3/256 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML--- 103
T + L+ ++ + EA +M KM G + YN + + NG+ D +++
Sbjct: 186 TYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKM 245
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q+ P+ T + + + + A + ++K+ + P+ + +++L Y+ +
Sbjct: 246 QQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDIT 305
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ L ME+ + + V YS++++ +++ G D I+ M+ + + Y+
Sbjct: 306 DTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYS 365
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+ V+ G+ +KAE + + + + +++ + +++ A Y ++
Sbjct: 366 ILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEM 425
Query: 284 GIKPCYTTWELLTWGY 299
G T+E L WGY
Sbjct: 426 GTPLNLKTYETLIWGY 441
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 23/265 (8%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSE-----------CGFLKCPLPYNHMLNLYI 91
PD T + L ++ QN ++ AE L+ KM + CG + + Y
Sbjct: 217 PDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGII---------IRGYC 267
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + + + L ++K+ P+ V +N + D + E+A +++ I PD +
Sbjct: 268 KEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVV 327
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+YST+ + + L + +M K + AYS L Y G D+ + M
Sbjct: 328 TYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSM 387
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ N +T +IS G+ + A +Y++ + + + L+ Y Q
Sbjct: 388 TKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQP 447
Query: 271 EMAESFYNRLVTKGIKPCYTTWELL 295
AE + G+ P +T EL+
Sbjct: 448 WKAEELLVTMEESGVAPEMSTIELV 472
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 129/307 (42%), Gaps = 5/307 (1%)
Query: 8 GAQVRAQSYRQRVAQAQAL-QTRARENFFENLPDK--MRGPDTCSALLHSYVQNKKSAEA 64
G ++ A SY V +L + + + +K MR T + L+ Y + K EA
Sbjct: 96 GFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEA 155
Query: 65 EALMEKMS-ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLA 122
E ++ +M E G + Y +++ Y G++ ++ E LK ++ N +
Sbjct: 156 EKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLIN 215
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
E+ + ++K + PD SY TL Y + L KA +M ++
Sbjct: 216 GYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEP 275
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
V Y++LL G + LR+W M+ N+ Y ++ L K+G+F +A ++
Sbjct: 276 TVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLW 335
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
D+ + N ++ +++ A+ + R+ G KP T+ L+ GY K
Sbjct: 336 DDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKV 395
Query: 303 GQMEKVL 309
G +E+
Sbjct: 396 GNVEEAF 402
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 130/304 (42%), Gaps = 3/304 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QE 105
C++L++ Y +N + E E L+ M + Y +++ Y +G K + Q
Sbjct: 209 VCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQM 268
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+K P VVTYN L D + A + + + + + P+ + Y TL KM
Sbjct: 269 LRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDF 328
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A T ++ R K+ A++++++ MG D +K+M L K + Y +
Sbjct: 329 SRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTL 388
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
K+G E+A I ++ E + N L+ ++ + T+G+
Sbjct: 389 SDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGL 448
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ +G+++K + + IG + + P+ + + + L G ID A
Sbjct: 449 SPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG--KGFAPNVIICSKIVSSLYRLGRIDEA 506
Query: 346 EHLL 349
LL
Sbjct: 507 NMLL 510
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 140/348 (40%), Gaps = 15/348 (4%)
Query: 40 DKMRGPD------TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
D+MR D TC+ ++++Y + K A + +M + GF + YN +++ Y+S
Sbjct: 55 DQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSL 114
Query: 94 GQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTKIDPDWIS 151
G ++ +L+ + +K + VT L + Q E AEK E+ K+ + D +
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y L Y K+ A EM K + N +SL++ Y G E R+ M
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMR 234
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQ 269
L K + Y ++ + G KA N+ D+ + +P V N LL
Sbjct: 235 KLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQM--LRKGIEPTVVTYNTLLKGLCRFGD 292
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A ++ ++ +G+ P + L G K G + L + + R
Sbjct: 293 YKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDIL--ARGINKSIYAF 350
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
N L + G++DGA+ + G I Y +L Y K G +
Sbjct: 351 NTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNV 398
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 5/234 (2%)
Query: 86 MLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
+L +Y G + + + K P + + N L+ + + +A + ++++
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
I PD + + + + Y K E+A ++EMEK N V+Y+SL+ Y ++G +
Sbjct: 62 IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAA 263
+ K M N T +I K + E+AE + E E G D L+
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM---EKVLECFKK 314
Y ++ A + ++ G+K L GY K GQ+ E++L C +K
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRK 235
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 33/335 (9%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ ++ ++ K+ +L E+ + SP+VVTY +A Q + A A+ E+
Sbjct: 420 YNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMI 479
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
P+ I S + S ++ ++A L++M + V L + N +
Sbjct: 480 GKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDF----DLVLDHRCLEDFQNADIRK 535
Query: 202 EVLRIWKKMMSL------FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
L WK +L F+ N+ Y ++ L K G+ A + S T D
Sbjct: 536 --LDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNF 593
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
L+ + + A + + +V KG+ P TT+ L G K G +++ F K
Sbjct: 594 TYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKL 653
Query: 316 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 375
++ +P+ YN L + G+ + LR K G
Sbjct: 654 --HLKGLIPN----VVTYNILIDGYCKSGSPREALDLRG--------------KMLKEGI 693
Query: 376 MPLIIVERMQKDNVQMDAETQKVLKITSEMPVSEV 410
P II + ++ ++ +K+ +EM S V
Sbjct: 694 SPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNV 728
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 113/295 (38%), Gaps = 18/295 (6%)
Query: 24 QALQTRARENFFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
Q +A +FE + K P+ CS ++ S + + EA L++KM + +
Sbjct: 465 QGRLDKAFSAYFE-MIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHR 523
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
N I K+ L E K + P+ V YN+ +A A + FL L
Sbjct: 524 CLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGL 583
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
PD +Y TL + +A EM + N Y++LL+ GY
Sbjct: 584 SHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYL 643
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW--ESISGTGDPRVPN 258
D R++ K+ N Y +I K G +A ++ + E IS P+
Sbjct: 644 DRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGIS-------PS 696
Query: 259 I-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
I L+ + ++ +E A N + + T+ L G ++ G ++K+
Sbjct: 697 IITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKM 751
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/188 (18%), Positives = 82/188 (43%), Gaps = 1/188 (0%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVV 115
++ K +A +S F Y +++ + + G +++ + E+ K P++
Sbjct: 569 KSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNIT 628
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TYN L + A + F +L + P+ ++Y+ L Y K P +A +M
Sbjct: 629 TYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKM 688
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
K + + YSSL++ + +E +++ +M + A ++ ++ ++ G+
Sbjct: 689 LKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDV 748
Query: 236 EKAENIYD 243
+K +++
Sbjct: 749 KKMSKLHN 756
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 138/303 (45%), Gaps = 16/303 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + I GQ +KV ++ E+ + + PD VTY+ ++A +++A + E+
Sbjct: 197 YNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEM 256
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+ + SL+ K++ A + +EM CR + Y+ L+ G
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRI 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-- 258
DE + +M K + +I+ L K G + +++E +S +PN
Sbjct: 317 DEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM-GVSHC----IPNVV 371
Query: 259 ----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
I+ A + +++++ S++ R+ GI P T+ +L G+ K ++EK + ++
Sbjct: 372 TYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEE 431
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKA 373
+ + P + + L + D A L L+ N G S +Y +++ KA
Sbjct: 432 M--DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKA 489
Query: 374 GKM 376
G++
Sbjct: 490 GRL 492
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 5/293 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LK 141
N+M+N G+LD ++ +E+ + P+VVTYN + A + + ++ E +K
Sbjct: 339 NNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMK 398
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P +YS L + K EKA L+EM+++ AY SL+ D
Sbjct: 399 GSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 458
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+++++ + Y +I L K G + A N++DE + T + N L+
Sbjct: 459 LACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALM 518
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ L+ A + ++ G P ++ ++ G K G + +E S K
Sbjct: 519 SGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIK 578
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
PD + L G + A L+ + G I Y+S+L K
Sbjct: 579 --PDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 40 DKMRG------PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
++M+G P T S L+ + + + +A L+E+M E GF CP Y +++
Sbjct: 395 ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454
Query: 94 GQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
+ D ++ QELK+N S Y + + + A F E+ K P+ +Y
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAY 514
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L S + + ++A TT+++M++ C + +Y+ +L+ G + + M +
Sbjct: 515 NALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKN 574
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
K + Y V+S+L G FE+A + E ++
Sbjct: 575 STIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALG 611
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 94/239 (39%), Gaps = 6/239 (2%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
+ +E + E+M G P Y+ +++ + +++K +L+E+ +K P Y
Sbjct: 386 RVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYC 445
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ A + A + F ELK+ Y+ + K + A EM K
Sbjct: 446 SLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKL 505
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C N AY++L+S DE L +KM + Y +++ L K G +A
Sbjct: 506 GCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRA 565
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
+ ++ + D N +L+A + E A + G + ++L+T+
Sbjct: 566 MEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFE-----YDLITY 619
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS-LFAKMNDAEYTCV 225
KA T +++ R C+ AY+S++ + + G ++V ++ +M + + Y+ +
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSAL 236
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ KLG + A + +E + ++ ++++ + + + A S + +
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC 296
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P T+ L G K G++++ + + PD ++ N L + G +D
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEM--QREDCKPDTVVMNNMINFLGKAGRLDDG 354
Query: 346 EHLL 349
L
Sbjct: 355 LKLF 358
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 22/285 (7%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAE---KAFLELKKTKID--------PDWISYST 154
L + PDVVTY + A A + D E AE + LE + ++ P+ ++Y+T
Sbjct: 220 LARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTT 279
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L + Y E + L+ ME+ N + Y+ L++ YT G + ++M+S +
Sbjct: 280 LMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAY 339
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
N YT ++ + G AE + E+ L+ Y R ++E A+
Sbjct: 340 VAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAK 399
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
R+ G+ P ++ L Y+ G + + ++ + PD L YN
Sbjct: 400 GVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR---REAEAYPDFPLT---YN 453
Query: 335 KL----EEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG 374
L ++GD+ GAE +L +R G E ++LL YA+AG
Sbjct: 454 TLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAG 498
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 16/279 (5%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM--SECG---------FLKCPLPYNHM 86
LPD + T + L+H+Y + AEA++ +M E G L + Y +
Sbjct: 225 LPDVV----TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTL 280
Query: 87 LNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
+ Y + G ++ +L+ +++ +P+V+TY + + A + D + AE + +
Sbjct: 281 MTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYV 340
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P+ +Y+TL Y A L ME + +++L+++Y G +
Sbjct: 341 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 400
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+ +M + + ++++ V G+ AE + E+ + P N L+ Y
Sbjct: 401 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYA 460
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
++ + AE R+ KG+ P TT L Y + G
Sbjct: 461 DKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 499
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ PD ++ T+ +Y PE A L + R + V Y++L+ Y G +
Sbjct: 189 LSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAE 248
Query: 205 RIWKKMMS-----------LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
+ ++M+ L N YT ++++ G+ E +E + + E +
Sbjct: 249 AVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPN 308
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+L+ AY R ++ AE R+++ + P T+ L Y G E
Sbjct: 309 VMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLA 368
Query: 314 K--AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
+ A G + + L+T +G+++ A+ +L + AG T + +++LL Y
Sbjct: 369 RMEAAGVLPTALTFATLMTV----YAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAY 424
Query: 371 AKAGKM 376
AG +
Sbjct: 425 VVAGDV 430
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y + A+ ++ +M G + ++ +LN Y+ G + Q+L+
Sbjct: 381 TFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRR 440
Query: 107 KKNTSPDV-VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD +TYN + A + D AE ++ + PD + STL Y + P
Sbjct: 441 EAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDP 500
Query: 166 EKAATTL 172
A L
Sbjct: 501 LGAEAVL 507
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 134/298 (44%), Gaps = 6/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + + GQ +KV ++ E+ + + PD VTY+ ++A +++A + E+
Sbjct: 193 YNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEM 252
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K + P Y+ L +L+ K+ A +EM + CR + Y+ L+ G
Sbjct: 253 KDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRF 312
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-I 259
DE + +M + + +I+ L K G + A +++E ++ N I
Sbjct: 313 DEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTI 372
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ A + +++++ S++ R+ GI P T+ +L G+ K + EK + ++
Sbjct: 373 IKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEM--DE 430
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + + L + D A L L+ N G S +Y +++ KAG++
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRL 488
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 145/375 (38%), Gaps = 8/375 (2%)
Query: 5 RPHGAQVRAQSYRQRVAQAQALQ-TRARENFFENLPDKMRGPD--TCSALLHSYVQNKKS 61
+ +G Q A+ Y +A L FE + + PD T + L+ + +
Sbjct: 253 KDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRF 312
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLW 120
EA +M G + N+M+N G+LD ++ +E+ P VVTYN
Sbjct: 313 DEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTI 372
Query: 121 LAACASQNDKETAEKAFLE-LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ A + + ++ E +K + I P +YS L + K EKA L+EM+++
Sbjct: 373 IKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKG 432
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
AY SL+ D +++++ + Y +I L K G + A
Sbjct: 433 FPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAV 492
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
N++DE + T + N L++ L+ A + R+ G P ++ ++ G
Sbjct: 493 NLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGL 552
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS 359
K G + +E S K PD + G + A L+ + G
Sbjct: 553 AKTGGPHRAMEMLSNMKQSAIK--PDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEY 610
Query: 360 TEI-YNSLLRTYAKA 373
I Y+S+L K
Sbjct: 611 DLITYSSILEAIGKV 625
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 7/268 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE LP P+ T + ++ + AEA AL+ +M G + YN +++ Y
Sbjct: 185 LFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYG 240
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G+L++V +++ E++ PDVVTYN + E A F E+K+ + + +
Sbjct: 241 KCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVV 300
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++ST + K + +A +M + + N V Y+ L+ G D+ L + +M
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ +N YT ++ L K G+ +AE+++ E + + L+ +
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWG 298
E A S + + KG++ + + L WG
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWG 448
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 3/303 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + K AEAE + M G L Y +++ + ++ +L E+
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM 430
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K DV Y + + + A+ ++ + + P+ + Y+ + K
Sbjct: 431 KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKE 490
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L++M R N V Y +L+ G DE + + KM+ L + N YT +
Sbjct: 491 SEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTAL 550
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K G +KA + DE + D V L+ ++ + L+ A + +++ G+
Sbjct: 551 VDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGL 610
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + WG+ +++ E + I + PD + NK ++ G+++ A
Sbjct: 611 QLDLYGYTCFVWGFCNLNMIQEAREVLSEMIEN--GITPDAVVYNCLINKCQKLGNMEEA 668
Query: 346 EHL 348
L
Sbjct: 669 AIL 671
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 84/203 (41%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+P+V T+N+ + + D A +K PD ++Y++L Y K E+
Sbjct: 191 APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEK 250
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ EM CR + V Y++L++ + G + + +M N ++ + +
Sbjct: 251 LVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFC 310
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G +A ++ + + L+ +L+ A N +V +G+
Sbjct: 311 KNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVV 370
Query: 291 TWELLTWGYLKKGQMEKVLECFK 313
T+ +L G K+G++ + + F+
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFR 393
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 140/308 (45%), Gaps = 11/308 (3%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAAC 124
L M G L + YN +++ +LD+ +L+E+ + + SPDV+TY ++
Sbjct: 220 LFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGF 279
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
E A F E+ ++ I+P ++++ L + K+ A ++M +C +
Sbjct: 280 RKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDV 339
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
V ++SL+ Y G L++W M + N Y+ +I++L K +A ++ +
Sbjct: 340 VTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQ 399
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ P + N ++ + ++ A + K +P T+ +L G+ KG+
Sbjct: 400 LKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGR 459
Query: 305 MEKVLECFKK--AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
M + L+ FKK AIG PD+ I++ L + G A H++ T ++S
Sbjct: 460 MVEALDIFKKMLAIGC----APDNITISSLVACLLKAGKPSEAFHIVQTASEDLNLS--- 512
Query: 363 YNSLLRTY 370
++SL +T+
Sbjct: 513 FSSLRKTF 520
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 138/330 (41%), Gaps = 46/330 (13%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN++LN + G++ + + +E L ++ P+ T+N+ + + E + F ++
Sbjct: 166 YNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQ 225
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYK 200
PD ++Y+TL S K ++A LKE++ R C + + Y+S++S G++
Sbjct: 226 SFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIIS-----GFR 280
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--N 258
KLG+ E A +++E I +P V N
Sbjct: 281 ------------------------------KLGKLEAASVLFEEM--IRSGIEPTVVTFN 308
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
+L+ + + AE+ + ++ + P T+ L GY + G + L+ + +
Sbjct: 309 VLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWD--VMK 366
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM- 376
R P+ + N L + I A LL L+ + IYN ++ + KAG +
Sbjct: 367 ARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVD 426
Query: 377 -PLIIVERMQKDNVQMDAETQKVLKITSEM 405
+IV M++ + D T +L I M
Sbjct: 427 EANVIVTEMEEKRCRPDKVTFTILIIGHCM 456
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 104/237 (43%), Gaps = 8/237 (3%)
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + E++ R + Y+ LL+ G E + ++K+ ++ + N + +I
Sbjct: 147 AKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIR 206
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG-IK 286
L ++GE EK +++ +S D N L++ N+L+ A + ++
Sbjct: 207 GLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCS 266
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ + G+ K G++E F++ I S + V ++ + K+ G++ A
Sbjct: 267 PDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKI---GNMVAA 323
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
E + + + + + + SL+ Y + G ++ L + + M+ NV + T V+
Sbjct: 324 EAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVI 380
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 145/321 (45%), Gaps = 24/321 (7%)
Query: 86 MLNLYISNGQLDKVPQMLQE-------LKKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
ML + S G LD + +L+E L+ NT ++T A N A F
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLIT------AYGRGNKSGDAFDLFN 54
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
+ + P +++ L + + E+A K++ ++ C+ +R AY+ L+ + G
Sbjct: 55 QAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSG 114
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP- 257
D + ++++M ++ ++ Y ++++L K G ++A + +D T P +P
Sbjct: 115 QLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLT--PNIPT 172
Query: 258 -NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
N+L+ A+ QL+MA + + +G +P T+ +L G++ + F K
Sbjct: 173 YNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT 232
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 374
G PD + N L + G ++ A + + + G V+ ++ YNSLL T AKAG
Sbjct: 233 GD--GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG-VAVDLVNYNSLLATLAKAG 289
Query: 375 KMPLI--IVERMQKDNVQMDA 393
M + +++ M + DA
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDA 310
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 138/341 (40%), Gaps = 43/341 (12%)
Query: 41 KMRG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
K++G PD T L+++ + + EA + + M E G YN +++ + GQL
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 97 DKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
D + E+K+ P VVTYN+ L A S A K F ++ PD +YSTL
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+ K E+A +EM R + V Y+SLL+ G D R+WK M +
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD---RVWKLMKEMSR 303
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
K + + S N ++ A N+ + A
Sbjct: 304 K-----------------------GFHPDAFSF---------NTIMDALGKANKPDAARE 331
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK 335
+ R+V G KP ++ +L Y + G + + ++ + + ++P+ + + +
Sbjct: 332 VFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEA--GFIPETKTYNSLIHW 389
Query: 336 LEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
L G +D A +L + AG YN L+ K G+
Sbjct: 390 LATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 120/274 (43%), Gaps = 3/274 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + + A L KM+ G Y+ ++N +G++++ ++ +E+
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + D+V YN LA A + + K E+ + PD S++T+ K P
Sbjct: 267 VDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKP 326
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A M + C+ + ++Y+ L+ Y G + ++ ++M+ Y +
Sbjct: 327 DAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSL 386
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L G+ ++A + +E E+ D N L+ R + + A + ++ KG+
Sbjct: 387 IHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV 446
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIG 317
+P ++ + G ++++ L FK KA+G
Sbjct: 447 EPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 144/351 (41%), Gaps = 7/351 (1%)
Query: 26 LQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 85
L+T +E E P + P+T L+ +Y + KS +A L + +
Sbjct: 14 LETLLKEMVAEGRPLR---PNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTK 70
Query: 86 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++++ +++G+ ++ + ++L +K D YN+ + ++A + F E+K
Sbjct: 71 LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+PD +Y L + K ++A + M +R N Y+ L+ + +G D L
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
++ +M + + Y ++ +L G A ++ + + D + L+
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
++E A + +V +G+ + L K G M++V + K+ S + + P
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM--SRKGFHP 308
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
D + L + D A + + +G I YN L+ +YA+ G
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFG 359
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 113/281 (40%), Gaps = 42/281 (14%)
Query: 25 ALQTRARENFFENLPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
AL + R L KM G PD T S L++ ++ + EA + +M + G
Sbjct: 214 ALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAV 273
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ YN +L G +D+V ++++E+ +K PD ++N + A N + A + F
Sbjct: 274 DLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVF 333
Query: 138 LELKKTKIDPDWISYSTLTSLYIKME-----------------LPE-------------- 166
+ ++ PD ISY+ L Y + +PE
Sbjct: 334 ARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATD 393
Query: 167 ----KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+A L+EME CR + V Y+ L+ + G R++++M + + Y
Sbjct: 394 GQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSY 453
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
I L ++A ++ + +++ D + IL+ A
Sbjct: 454 AVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 17/298 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALLH + E ++++M E G L + YN ++ G++++ ++ +E+
Sbjct: 503 TSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEM 562
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD TYN + A + + E K+ P+ +Y+ L Y K +
Sbjct: 563 VQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRI 622
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A K ++ + V Y+ L++ Y +G E ++ M S A Y+ +
Sbjct: 623 EDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSL 682
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I + +G ++A+ I++E + + +PN+ L+ + Q+++ S +
Sbjct: 683 IHGMCCIGRVDEAKEIFEEMRN-----EGLLPNVFCYTALIGGHCKLGQMDIVGSILLEM 737
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+ GI+P T+ ++ GY K G M++ E + I + PD T YN L++
Sbjct: 738 SSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRN--GIAPD----TVTYNALQK 789
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K+ P + T NL L++ N+ + + F +L + PD +++T + + K
Sbjct: 214 KRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVG 272
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A +ME N V Y++++ G +E LR +M+ + Y +I
Sbjct: 273 DAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLI 332
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S L+KL FE+A + E S+ + V N L+ Y + + A + + KG+K
Sbjct: 333 SGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMK 392
Query: 287 PCYTTWELLTWGYLKKGQMEK 307
P + T+ L G+ + QME+
Sbjct: 393 PNFVTFNTLLQGFCRSNQMEQ 413
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 21 AQAQALQTRARENFFENLPDKMRGP--DTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
+Q + L +R + F + P TC+ LL S V+ + ++ + + + G
Sbjct: 195 SQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQ-GVAP 253
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAF 137
+ +N + G++ + +++ P+VVTYN + E A +
Sbjct: 254 DVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFK 313
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+ ++K++P ++Y L S +K+E+ E+A L EM N V +++L+ Y
Sbjct: 314 DRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRK 373
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G E LR+ +M K N + ++ + + E+AE + S + + V
Sbjct: 374 GDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVC 433
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK-KGQMEKVLECFKKAI 316
+ ++ + R+ A +L++ I+ + L G K +G E + FK A
Sbjct: 434 SYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLA- 492
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
+V+ + A + L E+G+++ +L + G + I YN+L+ K GK
Sbjct: 493 -AVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGK 551
Query: 376 M--PLIIVERMQKDNVQMDAETQKVL 399
+ + E M + Q D T L
Sbjct: 552 IEEAFKLKEEMVQQEFQPDTYTYNFL 577
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 153/410 (37%), Gaps = 73/410 (17%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 121
EA ++ +M GF + +N +++ Y G + + ++ E+ K P+ VT+N L
Sbjct: 343 EANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLL 402
Query: 122 AACASQNDKETAEKAFLELKKT--KIDPDWISY--------------------------- 152
N E AE+ + + + ++ D SY
Sbjct: 403 QGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIR 462
Query: 153 ---STLTSLYIKMELPEKAATTLKEMEKRTCRK----NRVAYSSLLSLYTNMGYKDEVLR 205
S LT L + + E + ++ K K N V ++LL G +EV
Sbjct: 463 VSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFE 522
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
+ K+M+ ++ Y +I K G+ E+A + +E D N L+
Sbjct: 523 VLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLA 582
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA---------- 315
+ +++ + G P T+ LL GY K ++E ++ FK
Sbjct: 583 DMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSV 642
Query: 316 -----------IGSV------------RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
IG+V R +P ++ + + G +D A+ + +
Sbjct: 643 VYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEM 702
Query: 353 RNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
RN G + + Y +L+ + K G+M ++ I+ M + ++ + T ++
Sbjct: 703 RNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIM 752
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 92/247 (37%), Gaps = 36/247 (14%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYN 118
K EA L E+M + F YN ++ G++D V ++L E K+ P+V TY
Sbjct: 551 KIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYA 610
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME--------------- 163
L L + E A K F L K++ + Y+ L + Y ++
Sbjct: 611 LLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSR 670
Query: 164 --LP------------------EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
LP ++A +EM N Y++L+ + +G D V
Sbjct: 671 GILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIV 730
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
I +M S + N YT +I KLG ++A + +E D N L
Sbjct: 731 GSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKG 790
Query: 264 YINRNQL 270
Y +L
Sbjct: 791 YCKEREL 797
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 10/299 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ Y QL+K + + L+ P TY L L A + AE E++
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P+ Y+ +K EKA + M++ CR N ++ ++++Y
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 440
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++++ +M S+ K N YT ++++ + G EKAE +++E + D N L+
Sbjct: 441 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 500
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGS 318
AY + A ++ + G +P ++ +L Y + G E V E K+
Sbjct: 501 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR--G 558
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+ + H L+ AA+ + G+ E ++ L +G T N++L YA+AG++
Sbjct: 559 MSPTMKSHMLLLAAHAR---SGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 614
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 123/330 (37%), Gaps = 38/330 (11%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y AE ++ +M E G YN L+ + +K ++ Q
Sbjct: 354 DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 413
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K+ + T+ L + ++ K F E+K P+ +Y+ L + + + L
Sbjct: 414 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 473
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +EM++ + AY++L+ Y+ G I+ M + + + A Y
Sbjct: 474 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNI 533
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E AE +++E L +G
Sbjct: 534 LVDAYGRAGLHEDAEAVFEE-----------------------------------LKQRG 558
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P + LL + + G + E + S PD + A N G +D
Sbjct: 559 MSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS--GLTPDTFALNAMLNAYARAGRLDD 616
Query: 345 AEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
E LL + G YN + Y +AG
Sbjct: 617 MERLLAAMERRGDADVGTYNVAVNAYGRAG 646
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 2/181 (1%)
Query: 32 ENFFENLPDKMRGPDTCSA--LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE L + P S LL ++ ++ + E +M ++ + G N MLN
Sbjct: 548 EAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNA 607
Query: 90 YISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
Y G+LD + ++L +++ DV TYN+ + A E AF + + D
Sbjct: 608 YARAGRLDDMERLLAAMERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADV 667
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++++ Y + + + ++EM C + LL+ ++ ++V I +
Sbjct: 668 VTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRS 727
Query: 210 M 210
M
Sbjct: 728 M 728
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T +L++ + + + ++A +L++KM E G+ + YN +++ +++
Sbjct: 153 PDRV----TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 99 VPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+E+ +K P+VVTY + + + A + ++ K KI P+ I+YS L
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++K +A +EM + + + V YSSL++ DE +++ M+S
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I+ K E ++ E + N L+ + ++ A+ F+
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+++ GI P T+ +L G G++EK L F+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 156/356 (43%), Gaps = 13/356 (3%)
Query: 4 RRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKS 61
R G+ V R RV+ A +L + E ++ PD + A++ S + K+
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK--------PDIVAYNAIIDSLCKTKRV 206
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLW 120
+A +++ G + Y ++N ++ + ++L + +KK +P+V+TY+
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L A A++ F E+ + IDPD ++YS+L + + ++A M + C
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGC 326
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ V+Y++L++ + ++ ++++++M N Y +I + G+ +KA+
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ + + + D NILL + +LE A + + + + T+ + G
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
K G++E+ F S++ PD T + L +G + E L ++ G
Sbjct: 447 KTGKVEEAWSLFCSL--SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 16/354 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
LL + V+ KK +L +KM G +N ++N + Q+ +L + LK
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PD VT + +N A ++ + PD ++Y+ + K + A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
KE+E++ R N V Y++L++ N + R+ M+ N Y+ ++ +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
VK G+ +A+ +++E +S D + L+ ++++ A ++ +V+KG
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL----EEQGDIDGA 345
++ L G+ K ++E ++ F++ S R V + T YN L + GD+D A
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVSN----TVTYNTLIQGFFQAGDVDKA 384
Query: 346 EHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
+ + G +S +I YN LL G++ L+I E MQK + +D T
Sbjct: 385 QEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 137/289 (47%), Gaps = 3/289 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + + PD T ++L+H+ + L+ +M L + ++ +++
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G++ + +++ +++ PDVVTY + Q++ + A K F + + PD
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
ISY+TL + Y K+ +KA +EM ++ + Y++L+ ++G + + ++ +
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M++ + Y+ ++ SL K E+A + E+ + D +V NI++ +
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LE A ++ L +KG+ P T+ ++ G K+G + + + F + G+
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 505
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 146/367 (39%), Gaps = 39/367 (10%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T + L+ K EA L +KM + GF + Y ++N G ++L+
Sbjct: 126 PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 185
Query: 105 ELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL-------- 155
+++ N PDVV Y + + A F ++ I PD +Y++L
Sbjct: 186 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 245
Query: 156 -----TSLYIKME----LPE------------------KAATTLKEMEKRTCRKNRVAYS 188
T+L +M LP+ +A + M +R + V Y+
Sbjct: 246 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 305
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
+L+ + DE ++++ M+ + YT +I+ K+ + +KA +++E
Sbjct: 306 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D + N L+ + +L+ A + ++ +V +G P T+ +L K +E+
Sbjct: 366 EWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA 425
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLL 367
+ K S PD ++ + + G+++ A L L + G H S YN ++
Sbjct: 426 MALLKAIEAS--NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483
Query: 368 RTYAKAG 374
K G
Sbjct: 484 HGLCKRG 490
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 114/273 (41%), Gaps = 5/273 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
LK PD T+ + + A F ++ P+ ++Y TL + K+
Sbjct: 118 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNT 177
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L+ ME+ C+ + V Y+S++ E ++ +M+ + YT +
Sbjct: 178 SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSL 237
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ +L L E++ + ++ + D + + ++ A ++ A + ++ +G+
Sbjct: 238 VHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLITAAYNKLEEQGDIDG 344
+P T+ L G+ + +M++ ++ F VRK + PD T N + ID
Sbjct: 298 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMM---VRKGFAPDVISYTTLINGYCKIHKIDK 354
Query: 345 AEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
A +L + R T+ YN+L+ G++
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 3/255 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + EA + + M GF + Y ++N Y ++DK +
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 358
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+ +K PD TYN + + A F E+ PD ++YS L K
Sbjct: 359 FEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 418
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+A LK +E + Y+ ++ G + ++ + S +
Sbjct: 419 NCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWT 478
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I L K G +A ++ E + + D N + ++ N+ A ++
Sbjct: 479 YNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEML 538
Query: 282 TKGIKPCYTTWELLT 296
+G +T LL
Sbjct: 539 ARGFSADVSTTTLLV 553
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/244 (17%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L + P +V + L + A T ++ + P+ + + L + + +
Sbjct: 48 LHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRV 107
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A + L ++ K + + +++L+ G E L ++ KM+ + N Y +
Sbjct: 108 GFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL 167
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ L K+G A + E + D + ++ + Q+ A + ++++V +GI
Sbjct: 168 INGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI 227
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L + + V + + S K +PD + + + L ++G + A
Sbjct: 228 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS--KILPDVVIFSTVVDALCKEGKVTEA 285
Query: 346 EHLL 349
++
Sbjct: 286 HEIV 289
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D+ L + +++ + + ++ +++S+ K+ + ++ + +S + NIL
Sbjct: 38 DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 97
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ ++ + N++ A S +++ G +P TT+ L G +G++ + L F K I
Sbjct: 98 INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID--E 155
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
+ P+ N L + G+ A LL ++ IY S++ + K
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 208
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 159/364 (43%), Gaps = 35/364 (9%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL 67
A + + R+A + A++ A + F + S LL +++N++ ++E
Sbjct: 69 AASLTPDCHIDRIAFSAAVENLAEKKHFSAV----------SNLLDGFIENRQDLKSERF 118
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVV-TYNLWLAACAS 126
H + LY LD ++ ++L+K P V + N L AC
Sbjct: 119 AA---------------HAIVLYAQANMLDHSLRVFRDLEKFEIPRTVKSLNALLFACLV 163
Query: 127 QNDKETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
D + A++ ++E+ K I+PD +Y+ + ++ + + + + EME++ + N
Sbjct: 164 AKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSS 223
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
++ ++S + + DEV ++ M + + Y I SL K + ++A+ + D
Sbjct: 224 SFGLMISGFYSEDKNDEVGKVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM 283
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP---CYTTWELLTWGYLKK 302
S + + L+ + N + E A+ + +V +G KP CY T L + K
Sbjct: 284 LSAGMKPNTVTYSHLIRGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFT---LIYYLCKG 340
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
G E L K+++ + WVP ++ + N L + +D A+ L+ ++ + E+
Sbjct: 341 GDFETALVLCKESME--KNWVPSFSIMKSLVNGLAKDSKVDEAKELIGQVKEKFTRNVEL 398
Query: 363 YNSL 366
+N +
Sbjct: 399 WNEV 402
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 6/280 (2%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F L + PDT + +++ V++ + EA L++ M L Y +L+
Sbjct: 690 IFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLG 749
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G+L++ M ++ ++ PDVV Y + A F + K + PD +
Sbjct: 750 KSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVV 809
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+YS+L K E+A + + C N YSSL+ + G D L ++++M
Sbjct: 810 TYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM 869
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
N Y ++S L K G AE + +E E + D NIL+ +
Sbjct: 870 QRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMV 929
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ AES++ R+ KGI P T+ L G+++K+LE
Sbjct: 930 DEAESYFKRMKEKGIVPDVITFTSLIESL---GKVDKLLE 966
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 175/405 (43%), Gaps = 49/405 (12%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
F+ + D+ P+ T + ++ + + EA L + E G + YN ++++
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472
Query: 91 ISNGQLDKVPQMLQELKKNTSPDVV--------------------------------TYN 118
GQ+DKV +++E+ + ++ TYN
Sbjct: 473 GKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYN 532
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
++A + A K +KK + P ++Y+TL K ++A + L+EMEK+
Sbjct: 533 TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C + V YSSL++ + ++E L ++ +M+ + + Y+ VI+ L K + ++A
Sbjct: 593 GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652
Query: 239 ENIYDEWESISGTGDPRVPN--ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
+++ + G +P + N LL++ + +++ A +N L + P + ++
Sbjct: 653 LDVFGRMKE-EGM-EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMV 710
Query: 297 WGYLKKGQME---KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR 353
G +K +++ K+++ K + +PD T+ + L + G ++ A ++ +
Sbjct: 711 NGLVKSNRVDEACKLVDSMKN-----QNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765
Query: 354 NAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
GH + Y SL+ K GK+ LII M K D T
Sbjct: 766 EEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVT 810
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 158/393 (40%), Gaps = 76/393 (19%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN +++ +I NG +D+ ++L+ +KK+ P VVTY + + A E
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++K +P ++YS+L + + K + E++ + EM ++ C + YS +++
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D+ L ++ +M + Y ++SSLVK + + A I++E + S D V NI
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 260 LLAAYINRNQ-----------------------------------LEMAESFYNRLVTKG 284
++ + N+ LE A + + ++ +G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+P + L K G++ L F+ + ++ VPD ++ + L ++G ++
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAM--AKKRCVPDVVTYSSLIDSLGKEGRVEE 826
Query: 345 AEHLL------VTLRNAGHVSTEI------------------------------YNSLLR 368
A + N G S+ I YN+LL
Sbjct: 827 AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLS 886
Query: 369 TYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
AKAG++ + ++E M+K D T +L
Sbjct: 887 GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNIL 919
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 159/356 (44%), Gaps = 6/356 (1%)
Query: 35 FENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG 94
+ +L K G T + L+ +++ N EA L+E M + + + Y +++ G
Sbjct: 518 YPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577
Query: 95 QLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
+LD+ +L+E+ K+ P VVTY+ +A+ ++ +E + F E+ + D +YS
Sbjct: 578 RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
+ + K + ++A M++ Y +LLS D L+I+ ++
Sbjct: 638 LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
+ Y +++ LVK ++A + D ++ + D LL +LE A
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
+ + ++ +G +P + L K G++ L F+ + ++ VPD ++
Sbjct: 758 FNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM--AKKRCVPDVVTYSSLI 815
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQK 386
+ L ++G ++ A + + G + +Y+SL+ ++ K G + L + E MQ+
Sbjct: 816 DSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 136/333 (40%), Gaps = 14/333 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++LL ++ + A + +M G YN +L L + G + +L +
Sbjct: 221 TSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ 280
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PD T+ +++ + + A + E+ K+ IDP +++ L +K ++
Sbjct: 281 FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDE 340
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M+ C N V Y++L++ G +E ++ +M + Y +I
Sbjct: 341 ACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLID 400
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L K GE + A ++ E + + R NI+++ + A ++ L +G P
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVP 460
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L K GQM+KVL K+ + I + + +G I+GA+
Sbjct: 461 DVFTYNTLIDVLGKGGQMDKVLAIIKEMVEK------GGECIISRDSNAGHEGTIEGADR 514
Query: 348 LL----VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ + ++ G ++ YN+L+ + G +
Sbjct: 515 TVEYPSLGFKSLGEIT---YNTLMSAFIHNGHV 544
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 120/279 (43%), Gaps = 19/279 (6%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVP 100
G T + L+ + V++ EA M L+C + Y ++N G+L++
Sbjct: 321 GVHTFTVLIDALVKSGNIDEACKFFNGMKN---LRCSPNVVTYTTLVNGLAKAGRLEEAC 377
Query: 101 QMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
++ E+K+N SPD + YN + + + A F E+K + P+ +Y+ + S+
Sbjct: 378 EVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVL 437
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K +A +++++ + Y++L+ + G D+VL I K+M+ +
Sbjct: 438 GKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGE--- 494
Query: 220 AEYTCVISSLVKLGE---FEKAENIYDEWESISGTGDPRVP-NILLAAYINRNQLEMAES 275
C+IS G E A+ E+ S+ + N L++A+I+ ++ A
Sbjct: 495 ----CIISRDSNAGHEGTIEGADRTV-EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVK 549
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ P T+ L G K G++++ + ++
Sbjct: 550 LLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 119/273 (43%), Gaps = 8/273 (2%)
Query: 33 NFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + ++ PD ++L+ + K + A + M++ + + Y+ +++
Sbjct: 759 NMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818
Query: 91 ISNGQLDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G++++ + + K +P+V Y+ + + + + A + F E+++ + P+
Sbjct: 819 GKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNI 878
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+ L S K A L+EMEK C + V Y+ L+ MG DE +K+
Sbjct: 879 VTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKR 938
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + +T +I SL K+ + +A ++D E N+L+ +
Sbjct: 939 MKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGK 998
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ A ++ + KG P + +T G +K+
Sbjct: 999 VHEAAMIFHEMKVKGCMP-----DGITIGIMKR 1026
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 143/349 (40%), Gaps = 12/349 (3%)
Query: 37 NLPDKMRGPD------TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
NL DKM+ T +LL Y + + EA L +M + GF + Y ++ Y
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
I D +L E+++N S TYN+ + N ++ P
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+++ + ++K + A ++M K+ N V Y+S + Y D +++
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + A Y I + K G +A + T D V N + Y N
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A FY ++ + + + L G+ K G + LE + + + + +PD +
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMAN--HVIPDDKTF 713
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
TA + L GDIDGA+ LL +R VS I YN L+ + GK+
Sbjct: 714 TALTHGLCRSGDIDGAKRLLDDMRRL-DVSPNIVTYNMLINACVRDGKL 761
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++++ +V+ A + +M + G + Y ++ Y D ++L +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYV 596
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD+ YN ++ Q + A + L K + PD Y++ + Y +++
Sbjct: 597 RRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMM 656
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A+ M K+ + Y++L+ ++ +G L ++ +MM+ +D +T +
Sbjct: 657 AEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
L + G+ + A+ + D+ + + + N+L+ A + +L+ A ++ +++ G+
Sbjct: 717 THGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGV 776
Query: 286 KPCYTTWELL 295
P TT+++L
Sbjct: 777 VPDDTTYDIL 786
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 118/283 (41%), Gaps = 3/283 (1%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T + L++ + E + ++++ GF+ + YN ++N ++ G + M
Sbjct: 499 GDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMY 558
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+++ KK +P++VTY ++ N + A K + +++ I PD +Y+ + K
Sbjct: 559 RQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+A L + K + Y+S ++ Y N+ E + + M+ + Y
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T +I K+G A +Y E + D + L ++ A+ + +
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+ P T+ +L ++ G++++ + + + S VPD
Sbjct: 739 LDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSS--GVVPD 779
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 13/316 (4%)
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNL- 119
S E L +M E G L +N ++ + + + +L+ + PDV TY
Sbjct: 342 SDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYGCL 401
Query: 120 --WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
WL C Q E A + ++K+ + P ++Y +L Y + ++A EM
Sbjct: 402 IHWL--CKHQKLHE-AVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPD 458
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
+ N V Y++L+ Y D + +M D Y +I+ L + +
Sbjct: 459 KGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCE 518
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
+ + + S N ++ ++ + A Y ++ KGI P T+
Sbjct: 519 VDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFID 578
Query: 298 GYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
GY + + + K + VR+ PD A + +QG++ A H LV L
Sbjct: 579 GYCRTNCCDLAV----KLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD 634
Query: 356 GHV-STEIYNSLLRTY 370
G +YNS + Y
Sbjct: 635 GLTPDVTVYNSFVTGY 650
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 142/360 (39%), Gaps = 21/360 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
++ +++K+ +A L+E + + G Y +++ + +L + + ++K+
Sbjct: 367 VIKGLLRDKRWKDAIGLLELVVDTGVPDV-FTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P +VTY+ L + + A K + E+ P+ ++Y+TL YIK + + A
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L EM + Y+ L++ + EV + K+ +S Y +I+
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNIL-----LAAYINRNQLEMAESFYNRLVTKG 284
VK G A +Y + T PNI+ + Y N ++A + G
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGIT-----PNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG 600
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGD 341
I+P + + K+G M + L + PD + Y L+ +
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD--GLTPDVTVYNSFVTGYKNLKMMAE 658
Query: 342 IDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ ++ R TEIY +L+ ++K G + L + M ++V D +T L
Sbjct: 659 ASKFYYSMIKQRVVA--DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 119/305 (39%), Gaps = 32/305 (10%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K D Y++ + AC A + F E+ + PD Y+ S K+ ++
Sbjct: 179 KGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADR 238
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDAEYTCVI 226
A L +M + + YSS++ + +G DE LR+ +M ++ KM+ T ++
Sbjct: 239 ALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLM 298
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
GE KA +++DE S T +L+ + +++ +G+
Sbjct: 299 HGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLL 358
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIG----SVRKWVPDHRLITAAYNKLEEQGDI 342
+ L+ G L+ + +K AIG V VPD + L + +
Sbjct: 359 LSTYEFNLVIKGLLRDKR-------WKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKL 411
Query: 343 DGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKI 401
A +L ++ AG S Y+SLL Y + G+M + LK+
Sbjct: 412 HEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRM-------------------DEALKL 452
Query: 402 TSEMP 406
SEMP
Sbjct: 453 YSEMP 457
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVP 100
P+TC + L+ + +N A ++E+M G + P + Y+ +++ ++ + +
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG-ISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 101 QMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
++ +++ K+ SPD VT+N+ + + E A+K +KK +P+ +YS L +
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
+ K+ ++A T E++K + + V Y++L++ + G DE +++ +M + + +
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y ++ L G E+A + D+W S + I+L A +LE A F +
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ +GI P + TW L + G E
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTE 460
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 139/298 (46%), Gaps = 23/298 (7%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKN--TSPDVVTYNLWLAACASQNDKETAEKAFLE- 139
+N ++ + NG ++ +++E+K++ + P+ +TY+ + + + + A + F +
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ K I PD ++++ + + + + E+A L M+K C N YS+L++ + +G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E + + ++ K++ YT +++ + GE ++A + E ++ D N+
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+L + + E A ++ ++G+ ++ ++ G++EK ++ ++ S
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL--SVMSE 436
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMP 377
R P H A +N+ L+V L +G+ TEI +L + + G +P
Sbjct: 437 RGIWPHH----ATWNE------------LVVRLCESGY--TEIGVRVLIGFLRIGLIP 476
>gi|357442727|ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355480689|gb|AES61892.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 166/399 (41%), Gaps = 52/399 (13%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T + L+ +Y + + EA KM + G + +N M+++ ++G+L++V +L
Sbjct: 284 GSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLL 343
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+++ + SPD TYN ++ ND + A K F +K++ ++PD +SY TL Y
Sbjct: 344 RKMGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSYRTLLYAYSIR 403
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++ +A + EM+++ ++ S+L +Y G + L +W + M Y
Sbjct: 404 KMVCEAEELITEMDEKGLEIDQFTQSALTRMYIEAGMPERSL-LWFQRFHRAGNMTSECY 462
Query: 223 TCVISSLVKLGEFEKAENI----------------------------------YDEWESI 248
I + + G +AE + +D +
Sbjct: 463 AANIDAYGERGHISEAEKVFLWCQERKNLSAVEFNVMIKAYGVGKYYDKACQLFDSMDKH 522
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D + L+ + +Q +A+ + R+ G+ + + ++K GQ+E
Sbjct: 523 GVAADRCSYSSLIQVLASADQPHIAKPYLKRMQVAGLVTNCIPYCAVISCFVKLGQLEMA 582
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLL 367
+K+ IG K PD + N L G + A ++ AG +T IYNSL+
Sbjct: 583 EGVYKEMIGHGVK--PDIIVYGVLINALYGAGRVKEAISYANEIKRAGLPGNTVIYNSLI 640
Query: 368 RTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMP 406
+ Y K G N++ ET ++L+ + E P
Sbjct: 641 KLYTKVG-------------NLREAQETYRLLQSSEEGP 666
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 7/285 (2%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
R +E++ E PD P + LL++Y K EAE L+ +M E G + +
Sbjct: 380 RMKESYLE--PD----PVSYRTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFTQSALTR 433
Query: 89 LYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+YI G ++ Q + + Y + A + AEK FL ++ K +
Sbjct: 434 MYIEAGMPERSLLWFQRFHRAGNMTSECYAANIDAYGERGHISEAEKVFLWCQERK-NLS 492
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+ ++ + Y + +KA M+K +R +YSSL+ + + K
Sbjct: 493 AVEFNVMIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPYLK 552
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M N Y VIS VKLG+ E AE +Y E D V +L+ A
Sbjct: 553 RMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAG 612
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+++ A S+ N + G+ + L Y K G + + E ++
Sbjct: 613 RVKEAISYANEIKRAGLPGNTVIYNSLIKLYTKVGNLREAQETYR 657
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Query: 45 PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD L+++ + EA + ++ G + YN ++ LY G L + +
Sbjct: 596 PDIIVYGVLINALYGAGRVKEAISYANEIKRAGLPGNTVIYNSLIKLYTKVGNLREAQET 655
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ L+ + P V + N + Q+ E A++ F LKK ++ S++ + LY
Sbjct: 656 YRLLQSSEEGPAVYSSNCMIGLYTKQSMVEQAKEIFETLKKNGTANEF-SFAMMLCLYKN 714
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+E + A +M K + ++Y+ +L LY G E + I+K M++ +++D
Sbjct: 715 IERFDVAIQIANQMRKLELLTDSLSYNIVLDLYATAGRPKEAIEIFKDMVTASIQLDD 772
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
+M R Y +L+ +Y+ G +++ L + M+ + ++ V+ K G
Sbjct: 182 QMNARGIVATNSTYGTLIDVYSKGGLREDALFWLETMLEHGIEPDEVTMVIVVQLYKKAG 241
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
EF+KAE + +W G+P P+ N++ ++ ES L + + T+
Sbjct: 242 EFQKAEEFFRKW----SLGEPLRPS-------NKHMMDAPESVERALFSNASFGSH-TYN 289
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ-GDIDGAEHLLVTL 352
L Y K GQ ++ E F K + ++ +P T +N + G+ E + L
Sbjct: 290 TLIDTYGKAGQHKEASETFAKML---KQGIPP---TTVTFNTMIHICGNHGRLEEVSSLL 343
Query: 353 RNAGHV----STEIYNSLLRTYAKAGKMPLII--VERMQKDNVQMDAETQKVL 399
R G + T YN+L+ + K + + +RM++ ++ D + + L
Sbjct: 344 RKMGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSYRTL 396
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 107/281 (38%), Gaps = 39/281 (13%)
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
SN + P+ ++ L N S TYN + + A + F ++ K I P +
Sbjct: 262 SNKHMMDAPESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTV 321
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+++T+ + E+ ++ L++M + C + Y++L+SL+T D + +K+M
Sbjct: 322 TFNTMIHICGNHGRLEEVSSLLRKMGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRM 381
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + DP LL AY R +
Sbjct: 382 KESYLE-----------------------------------PDPVSYRTLLYAYSIRKMV 406
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
AE + KG++ T LT Y++ G E+ L F++ R
Sbjct: 407 CEAEELITEMDEKGLEIDQFTQSALTRMYIEAGMPERSLLWFQRF---HRAGNMTSECYA 463
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYA 371
A + E+G I AE + + + ++S +N +++ Y
Sbjct: 464 ANIDAYGERGHISEAEKVFLWCQERKNLSAVEFNVMIKAYG 504
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 20/301 (6%)
Query: 94 GQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
G+ +K Q+L+E+ +K PD TY + E + F E+K+ ++PD +Y
Sbjct: 431 GKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L + K L E+A + EM C N V Y++LL Y + I+ +M+
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVD 550
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR-----------VPNI-- 259
N Y+ +I L K GE +KA +Y++ SG + PN+
Sbjct: 551 AACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVT 610
Query: 260 ---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
L+ ++ A + ++ G +P ++ L G+ K G+++ E F +
Sbjct: 611 YGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMT 670
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN-AGHVSTEIYNSLLRTYAKAGK 375
++P T+ +++ + G +D A +L + N + + + Y +++ +K G+
Sbjct: 671 KC--GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728
Query: 376 M 376
+
Sbjct: 729 I 729
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 162/411 (39%), Gaps = 64/411 (15%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A AL +E+F NL + C+ ++ ++ EA + + +M + +
Sbjct: 256 ADALNMLEKEDF--NLDTVL-----CTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVT 308
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +L+ ++ Q +++ + + +P+ +N + + D A K F +
Sbjct: 309 YRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT 368
Query: 142 KTKIDPDWISYST-LTSLYIKMELPEKAATTL-----KEMEKRTCRKNRVAYSSLLSLYT 195
P +++Y+ + S+ + ELP L +EM +C N+V ++
Sbjct: 369 TCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLC 428
Query: 196 NMGYKDEVLRIWKKMMS----------------------------LFAKMNDA------- 220
+G ++ +I K+MM LF +M A
Sbjct: 429 GVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVY 488
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
YT +I S K G E+A + +DE S+ + + LL AY+ QL A ++R+
Sbjct: 489 TYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL-----ITAAYNK 335
V P T+ L G K G+++K E ++K IG+ D T A N
Sbjct: 549 VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNV 608
Query: 336 LEEQGDIDG---------AEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ IDG A LL + AG +I Y++L+ + K GK+
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 42/294 (14%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKK 108
AL+ + + K A+ + +M++CG+L Y +++ +G+LD ++L E L
Sbjct: 648 ALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND 707
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ +P+VVTY + + + E A +++ P+ ++Y+ L K + +
Sbjct: 708 SCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADAS 767
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM------------------ 210
K+M + C N V Y L++ G DE + +M
Sbjct: 768 LKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQG 827
Query: 211 --------MSLFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
+ L +M E Y +I S K G E A ++ E +S + +
Sbjct: 828 FSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMT 887
Query: 256 VPNI---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ L+ A +Q+E A + Y + KGI P +L+ + L KG +E
Sbjct: 888 STGMYASLIQALCLASQVEEAFTLYTEMTRKGIVP-----DLIVFVSLVKGLIE 936
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 42 MRGPDTCS---------ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
G DTC+ AL+ + +K ++A L++ M G + Y+ +++ +
Sbjct: 596 FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655
Query: 93 NGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D ++ + K P V TY + + A K E+ +P+ ++
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ + K+ EKA L ME++ C N V Y++L+ G D L+++K+M
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN 775
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
S N Y +I+ G ++A + DE
Sbjct: 776 SKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 98/253 (38%), Gaps = 52/253 (20%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALLH+Y+++K+ +A + +M + + Y+ +++ G++ K ++ ++L
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583
Query: 107 KKNT-----------------SPDVVTYNLWL-AACASQ--------------------- 127
+ +P+VVTY + C +Q
Sbjct: 584 IGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQ 643
Query: 128 -------------NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+ A++ FL + K P +Y++L K + A L E
Sbjct: 644 IVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE 703
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M +C N V Y++++ + +G ++ L + M N YT +I L K G+
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK 763
Query: 235 FEKAENIYDEWES 247
+ + ++ + S
Sbjct: 764 ADASLKLFKQMNS 776
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 23/369 (6%)
Query: 13 AQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLH----SYVQNKKSAEAEALM 68
AQ+ +R+A L + + N + D PD+ S +L Y ++ + +A +
Sbjct: 94 AQNLLERIAVRDYLSSPSVLNAVVRIHDD---PDSNSQILSWLVIFYANSRMTQDAIQVF 150
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-----NTSPDVVTYNLWLAA 123
E M GF P+ H + +++ ++ M+ ++ K P++ +N+ + A
Sbjct: 151 EHMRVHGFK----PHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHA 206
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
C D E AE+ E++ I PD +Y+TL SLY K + +A ME+ +
Sbjct: 207 CCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPD 266
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y+SL+ + G E LR+++++ A N YT +I ++ + E+A + +
Sbjct: 267 IVTYNSLIYGFCREGRMREALRLFREING--ATPNHVTYTTLIDGYCRVNDLEEALRLRE 324
Query: 244 EWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E + G V N +L +++ A N + + ++P T L Y K
Sbjct: 325 VME-VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STE 361
G M ++ KK + + K PD A + + ++D A+ L + +AG S
Sbjct: 384 GDMGSAMKVKKKMLEAGLK--PDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 362 IYNSLLRTY 370
Y+ L+ +Y
Sbjct: 442 TYSWLVDSY 450
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 146 DPDWIS--YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
DPD S S L Y + + A + M + + A + LL+ + V
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMV 181
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++KKM+ + N + +I + K G+ EKAE + +E ES D N L++
Sbjct: 182 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL 241
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + A +R+ G+ P T+ L +G+ ++G+M + L F++ G+
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT---- 297
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
P+H T + D++ A L + G H YNS+LR + GK+
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKI 351
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 117/298 (39%), Gaps = 11/298 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y + EA L E M G + YN +L G++ ++L E+
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD VT N + A D +A K ++ + + PD ++ L + K+
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L EM + YS L+ Y + K+ V+R+ ++ ++ + Y +
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K+ + E AE I+ + GD V L AY + A + + + +
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRL 541
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
+ + Y G + +G V + RLI+ K +Q D++
Sbjct: 542 MITLKIYRCFSASYAGDGSI----------LGLFWDHVIERRLISKNILKYIQQLDVN 589
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 139/300 (46%), Gaps = 10/300 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ + + GQ +KV ++ E+ + + PD +TY+ +++ ++A + F E+
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K + P Y+TL +Y K+ EKA +EM++ C Y+ L+ G
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-- 258
DE +K M+ + +++ L K+G E+ N++ E T P V +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT--PTVVSYN 377
Query: 259 -ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
++ A + ++ + S+++++ + P T+ +L GY K ++EK L ++
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM-- 435
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + N L + + A L L+ N G+VS+ +Y +++ + K GK+
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 136/330 (41%), Gaps = 12/330 (3%)
Query: 48 CSALLHSYVQNKKSA-------EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
CS +++Y + K EA + M G + N+++N+ G+++++
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 101 QMLQELKK-NTSPDVVTYNLWLAAC-ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ E+ +P VV+YN + A S+ F ++K + P +YS L
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y K EKA L+EM+++ AY SL++ + ++K++ F ++
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
Y +I K G+ +A ++++E ++ D N L++ + + A S
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLR 538
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
++ G + + ++ G+ + G + +E F+ S K PD
Sbjct: 539 KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK--PDGVTYNTLLGCFAH 596
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEI-YNSLL 367
G + A ++ +++ G I Y+S+L
Sbjct: 597 AGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ Y + + +A L+E+M E GF CP Y ++N + + ++ +EL
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N + Y + + A F E+K PD +Y+ L S +K +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + L++ME+ CR + +++ +L+ + G + +++ + K + Y +
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 226 ISSLVKLGEFEKAENIYDE 244
+ G FE+A + E
Sbjct: 591 LGCFAHAGMFEEAARMMRE 609
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
+ A +R A L +ENF N+ ++ + ++ + + K +EA L +
Sbjct: 451 INALGKAKRYEAANELFKELKENF-GNVSSRVY-----AVMIKHFGKCGKLSEAVDLFNE 504
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQND 129
M G YN +++ + G +++ +L+++++N D+ ++N+ L A
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
A + F +K + I PD ++Y+TL + + E+AA ++EM+ + + + YSS
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 190 LLSLYTNMGY-KDEV 203
+L N+ + KD+V
Sbjct: 625 ILDAVGNVDHEKDDV 639
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 3/192 (1%)
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
S L + ++ KA + + + R C+ Y+S++ + G ++V ++ +M +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 213 LFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
D Y+ +ISS KLG + A ++DE + ++ LL Y ++E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 331
A + + G P T+ L G K G++++ +K + PD +
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD--GLTPDVVFLNN 343
Query: 332 AYNKLEEQGDID 343
N L + G ++
Sbjct: 344 LMNILGKVGRVE 355
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 13/304 (4%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALM 68
+RA R R+ A A+ F+++ + P T S LL + + +A AL+
Sbjct: 258 IRALCVRGRIPDALAV--------FDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALL 309
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAA-CAS 126
++M G + YN ++N + G +D+ +L L + PD VTY L + C S
Sbjct: 310 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS 369
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
+ KE E+ E+ PD ++++T+ + + L ++A + M + C + V
Sbjct: 370 ERWKEV-EELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
YSS+L ++G D+ + + ++ S K + YT V+ L ++E+AE + E
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
D N ++A+ + ++ A ++ G P T+ + G + ++
Sbjct: 489 CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCID 548
Query: 307 KVLE 310
+E
Sbjct: 549 DAME 552
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 134/327 (40%), Gaps = 8/327 (2%)
Query: 44 GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
PD T + ++ S Q A +++ MSE G + + Y+ +L+ G++D +
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 102 MLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+L LK PD + Y L S E AE+ E+ + PD ++++T+ +
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ L ++A +++M + C + V Y+ ++ N D+ + + + S K +
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIV 567
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+ ++ L + +E AE + + D N ++ + + L A +
Sbjct: 568 TFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIM 627
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
G P +T+ ++ LK G+ + LE + + PD + L + G
Sbjct: 628 AENGCVPNSSTYSIVVDALLKAGKAQAALE----LLSGMTNGTPDLITYNTVISNLTKAG 683
Query: 341 DIDGAEHLL-VTLRNAGHVSTEIYNSL 366
++ A LL V + N T Y SL
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSL 710
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 150/404 (37%), Gaps = 49/404 (12%)
Query: 9 AQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALM 68
A + YRQ +A ++ + E PD + T + L+++ EA ++
Sbjct: 295 ATCKESGYRQAMALLDEMRAKGCE------PDIV----TYNVLINAMCNEGDVDEALNIL 344
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQ 127
+ G + Y +L + + +V ++L E+ N +PD VT+N + + Q
Sbjct: 345 SNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQ 404
Query: 128 N--DK---------------------------------ETAEKAFLELKKTKIDPDWISY 152
D+ + A + LK PD I+Y
Sbjct: 405 GLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 464
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+T+ E E+A + EM C + V ++++++ G D +R+ ++M
Sbjct: 465 TTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSE 524
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ Y C+I L + A + + +S D N LL ++ E
Sbjct: 525 NGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWED 584
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
AE ++ P T+ + +KG + + +E K I + VP+ +
Sbjct: 585 AEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK--IMAENGCVPNSSTYSIV 642
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ L + G A LL + N G YN+++ KAGKM
Sbjct: 643 VDALLKAGKAQAALELLSGMTN-GTPDLITYNTVISNLTKAGKM 685
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/397 (19%), Positives = 150/397 (37%), Gaps = 47/397 (11%)
Query: 8 GAQVRAQSYRQR--VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAE 65
GA+ R +S QR + +A L N P + C+ L+ + + ++AE
Sbjct: 152 GAKRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVV----PCNILIKRLCSDGRVSDAE 207
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLD---------------------------- 97
+ + + + YN M+N Y G+++
Sbjct: 208 RVFAALGPSATV---VTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVR 264
Query: 98 -KVPQML----QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
++P L L + SP VVTY++ L A ++ A E++ +PD ++Y
Sbjct: 265 GRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTY 324
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L + ++A L + C+ + V Y+ +L EV + +M S
Sbjct: 325 NVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
++ + +++SL + G ++A + D D + +L + +++
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDD 444
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
A +RL + G KP + + G Q E+ E + + S PD
Sbjct: 445 AVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCS--DCPPDEVTFNTV 502
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLL 367
L ++G +D A ++ + G S +I YN ++
Sbjct: 503 VASLCQKGLVDRAIRVVEQMSENG-CSPDIVTYNCII 538
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 154/349 (44%), Gaps = 6/349 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A+L K+ + E LM++M + +N ++ NG ++V ++L ++ +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PD+ Y + + E A + + + P+ + Y+T+ E ++
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM ++ C + V ++ L+ + G D V+ + ++M+S + YT VI+
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G ++A + S + I+L + + AE ++++ +G P
Sbjct: 400 GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L KKG +E+ +E K+ + V PD + + L + G + A
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII--VERMQKDNVQMDA 393
LL + N G +T IY+S+ ++ G++ +I + ++ ++ DA
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 141/319 (44%), Gaps = 6/319 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ + QN L+E+M G + + Y ++N + G +D+ +L+ +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ V+Y + L S AE+ ++ + P+ ++++TL + K L E+A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M C + ++YS+++ G +E L + M++ N Y+ + +L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G K ++D + + D + N ++++ R + + A F+ +V+ G P
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+T+ +L G +G ++ E + G++RK + H I+ N +E G E+
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGIS---NCTQENGKQKCEEN 658
Query: 348 LLVTLRNAGHVSTEIYNSL 366
L + N + EI L
Sbjct: 659 LTSAVDNNYKLPIEILGFL 677
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 149/373 (39%), Gaps = 13/373 (3%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD------TCSALLHSYVQNKKS 61
G + SY A + L R E L D+M D T + L+ +N
Sbjct: 211 GCEADIVSYN---AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLW 120
++ +MSE G Y +++ G L+ ++L + P+VV YN
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L S + AE+ E+ + D ++++ L + + L ++ L++M C
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ + Y+++++ + G DE + + K M S K N YT V+ L G + AE
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ + +P N L+ + +E A +++ G P ++ + G
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
K G+ E+ LE + + P+ + ++ L +G ++ + +++ S
Sbjct: 508 KAGKTEEALELLNVMVN--KGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565
Query: 361 EI-YNSLLRTYAK 372
+ YN+++ + K
Sbjct: 566 AVLYNAVISSLCK 578
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 115/293 (39%), Gaps = 4/293 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N +LN G +D+ +L++L D+V+YN L E+ E+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P+ ++++TL + L E+ L +M + C + Y++++ G+ +
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
I +M S K N Y V+ L +++AE + E D NIL+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ ++ ++++ G P T+ + G+ K+G +++ + K K
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK- 423
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
P+ T L G AE L+ + G + +N+L+ K G
Sbjct: 424 -PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 23/369 (6%)
Query: 13 AQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLH----SYVQNKKSAEAEALM 68
AQ+ +R+A L + + N + D PD+ S +L Y ++ + +A +
Sbjct: 94 AQNLLERIAVRDYLSSPSVLNAVVRIHDD---PDSNSQILSWLVIFYANSRMTQDAIQVF 150
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-----NTSPDVVTYNLWLAA 123
E M GF P+ H + +++ ++ M+ ++ K P++ +N+ + A
Sbjct: 151 EHMRVHGFK----PHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHA 206
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
C D E AE+ E++ I PD +Y+TL SLY K + +A ME+ +
Sbjct: 207 CCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPD 266
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y+SL+ + G E LR+++++ A N YT +I ++ + E+A + +
Sbjct: 267 IVTYNSLIYGFCREGRMREALRLFREING--ATPNHVTYTTLIDGYCRVNDLEEALRLRE 324
Query: 244 EWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E + G V N +L +++ A N + + ++P T L Y K
Sbjct: 325 VME-VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STE 361
G M ++ KK + + K PD A + + ++D A+ L + +AG S
Sbjct: 384 GDMGSAMKVKKKMLEAGLK--PDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 362 IYNSLLRTY 370
Y+ L+ +Y
Sbjct: 442 TYSWLVDSY 450
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 146 DPDWIS--YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
DPD S S L Y + + A + M + + A + LL+ + V
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMV 181
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++KKM+ + N + +I + K G+ EKAE + +E ES D N L++
Sbjct: 182 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL 241
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + A +R+ G+ P T+ L +G+ ++G+M + L F++ G+
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT---- 297
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
P+H T + D++ A L + G H YNS+LR + GK+
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKI 351
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 117/298 (39%), Gaps = 11/298 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y + EA L E M G + YN +L G++ ++L E+
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD VT N + A D +A K ++ + + PD ++ L + K+
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L EM + YS L+ Y + K+ V+R+ ++ ++ + Y +
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K+ + E AE I+ + GD V L AY + A + + + +
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRL 541
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
+ + Y G + +G V + RLI+ K +Q D++
Sbjct: 542 MITLKIYRCFSASYAGDGSI----------LGLFWDHVIERRLISKNILKYIQQLDVN 589
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 139/317 (43%), Gaps = 12/317 (3%)
Query: 66 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAAC 124
+++ KM + G + +N ++N + G++ + ++ E+ K+ P+V++Y +
Sbjct: 149 SVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGL 208
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ A F ++++ P+ ++YST+ K L A L EM +R N
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
Y+S++ + N+G +E R++K+M+ N +T ++ L K G +A +++
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
D N L+ Y + + A+ + ++ KG P ++ +L GY K +
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388
Query: 305 MEK----VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVS 359
M++ + E + KA+ PD + L + G A +L + + G H +
Sbjct: 389 MDEAKSLLAEMYHKALN------PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPN 442
Query: 360 TEIYNSLLRTYAKAGKM 376
Y LL + K G +
Sbjct: 443 LVTYVILLDGFCKHGHL 459
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 139/326 (42%), Gaps = 4/326 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++ S +++ +A + +M E G YN +++ + + GQL++ ++ +E+
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+ VT+ + + + A F + + ++PD +Y+ L Y L
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + M ++ C +Y+ L++ Y DE + +M + Y+ +
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L +LG ++A N++ E S + ILL + L+ A + K +
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P + +L G G++E E F K G + PD R T L ++G D A
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR--PDIRTYTVMIKGLLKEGLSDEA 532
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTY 370
L + + G + YN +++ +
Sbjct: 533 YDLFRKMEDDGFLPNSCSYNVMIQGF 558
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 117/279 (41%), Gaps = 1/279 (0%)
Query: 40 DKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKV 99
D M T + L+ + +EA + E M+E G YN +++ Y +++
Sbjct: 298 DVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEA 357
Query: 100 PQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
++ + ++K +P +YN+ + + A+ E+ ++PD ++YSTL
Sbjct: 358 KKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 417
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
++ P++A KEM N V Y LL + G+ DE L++ K M + N
Sbjct: 418 LCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPN 477
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
YT +I + G+ E A+ ++ + D R +++ + + A +
Sbjct: 478 IVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFR 537
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
++ G P ++ ++ G+L+ + + +G
Sbjct: 538 KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVG 576
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 17/272 (6%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
+V + N+ + N + + ++ K I PD I+++ L + ++A
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
EM KR N ++Y+++++ G + ++KKM K N Y+ +I SL K
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK- 245
Query: 233 GEFEKAENIYDEWESISGTGDPRVP------NILLAAYINRNQLEMAESFYNRLVTKGIK 286
++ N D E +S + +P N ++ + N QL A + +V + +
Sbjct: 246 ---DRLVN--DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM 300
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGA 345
P T+ +L G K+G + + F+ K V PD A + Q ++ A
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETM---TEKGVEPDISTYNALMDGYCLQRLMNEA 357
Query: 346 EHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ + + +R YN L+ Y K+ +M
Sbjct: 358 KKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 143/349 (40%), Gaps = 12/349 (3%)
Query: 37 NLPDKMRGPD------TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
NL DKM+ T +LL Y + + EA L +M + GF + Y ++ Y
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
I D +L E+++N S TYN+ + N ++ P
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+++ + ++K + A ++M K+ N V Y+S + Y D +++
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
+ + + A Y I + K G +A + T D V N + Y N
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A FY ++ + + + L G+ K G + LE + + + + +PD +
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMAN--HVIPDDKTF 713
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
TA + L GDIDGA+ LL +R VS I YN L+ + GK+
Sbjct: 714 TALTHGLCRSGDIDGAKRLLDDMRRL-DVSPNIVTYNMLINACVRDGKL 761
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++++ +V+ A + +M + G + Y ++ Y D ++L +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYV 596
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ PD+ YN ++ Q + A + L K + PD Y++ + Y +++
Sbjct: 597 RRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMM 656
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A+ M K+ + Y++L+ ++ +G L ++ +MM+ +D +T +
Sbjct: 657 AEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
L + G+ + A+ + D+ + + + N+L+ A + +L+ A ++ +++ G+
Sbjct: 717 THGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGV 776
Query: 286 KPCYTTWELL 295
P TT+++L
Sbjct: 777 VPDDTTYDIL 786
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 118/283 (41%), Gaps = 3/283 (1%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T + L++ + E + ++++ GF+ + YN ++N ++ G + M
Sbjct: 499 GDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMY 558
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+++ KK +P++VTY ++ N + A K + +++ I PD +Y+ + K
Sbjct: 559 RQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+A L + K + Y+S ++ Y N+ E + + M+ + Y
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T +I K+G A +Y E + D + L ++ A+ + +
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+ P T+ +L ++ G++++ + + + S VPD
Sbjct: 739 LDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSS--GVVPD 779
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 120/314 (38%), Gaps = 13/314 (4%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNL--- 119
E L +M E G L +N ++ + + + +L+ + PDV TY
Sbjct: 344 ETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVPDVFTYGCLIH 403
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
WL C Q E A + ++K+ + P ++Y +L Y + ++A EM +
Sbjct: 404 WL--CKHQKLHE-AVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
N V Y++L+ Y D + +M D Y +I+ L + + +
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
+ + S N ++ ++ + A Y ++ KGI P T+ GY
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580
Query: 300 LKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
+ + + K + VR+ PD A + +QG++ A H LV L G
Sbjct: 581 CRTNCCDLAV----KLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGL 636
Query: 358 V-STEIYNSLLRTY 370
+YNS + Y
Sbjct: 637 TPDVTVYNSFVTGY 650
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 142/360 (39%), Gaps = 21/360 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
++ +++K+ +A L++ + + G Y +++ + +L + + ++K+
Sbjct: 367 VIKGLLRDKRWKDAIGLLKLVVDTGVPDV-FTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P +VTY+ L + + A K + E+ P+ ++Y+TL YIK + + A
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L EM + Y+ L++ + EV + K+ +S Y +I+
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNIL-----LAAYINRNQLEMAESFYNRLVTKG 284
VK G A +Y + T PNI+ + Y N ++A + G
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGIT-----PNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG 600
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGD 341
I+P + + K+G M + L + PD + Y L+ +
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD--GLTPDVTVYNSFVTGYKNLKMMAE 658
Query: 342 IDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ ++ R TEIY +L+ ++K G + L + M ++V D +T L
Sbjct: 659 ASKFYYSMIKQRVVA--DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 118/301 (39%), Gaps = 24/301 (7%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K D Y++ + AC A + F E+ + PD Y+ S K+ ++
Sbjct: 179 KGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADR 238
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDAEYTCVI 226
A L +M + + YSS++ + + DE LR+ +M ++ KM+ T ++
Sbjct: 239 ALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLM 298
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
GE KA +++DE S T +L+ + +++ +G+
Sbjct: 299 HGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLL 358
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + L+ G L+ + + + K + + VPD + L + + A
Sbjct: 359 PSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDT---GVPDVFTYGCLIHWLCKHQKLHEAV 415
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEM 405
+L ++ AG S Y+SLL Y + G+M + LK+ SEM
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRM-------------------DEALKLYSEM 456
Query: 406 P 406
P
Sbjct: 457 P 457
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 155/385 (40%), Gaps = 12/385 (3%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
+V +A +L + F N+PD + + S ++ Y Q ++ + LME++ G
Sbjct: 267 KVKEAHSLLIQME--FRGNVPDVV----SYSVIVDGYCQVEQLGKVLKLMEELQRKGLKP 320
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 137
YN +++ G++ + Q+L+ +K + PD V Y ++ + K F
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLF 380
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+K+ KI PD+++Y+++ + +A EM + + + V Y++L+ Y
Sbjct: 381 DEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKA 440
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G E + +M+ N YT ++ L K GE + A + E +
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N L+ +E A + G P T+ + Y K G+M K E + +
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD 560
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+ P N G ++ E L+ + + G + + +NSL++ Y M
Sbjct: 561 --KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618
Query: 377 --PLIIVERMQKDNVQMDAETQKVL 399
+ I + M V D T +L
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNIL 643
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 152/341 (44%), Gaps = 19/341 (5%)
Query: 46 DTCSALLHSYVQNKKSAE-AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
D+C+ L + A + + SE G + YN +L+L G++ + +L
Sbjct: 217 DSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLI 276
Query: 105 ELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+++ + PDVV+Y++ + K EL++ + P+ +Y+++ S K
Sbjct: 277 QMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTG 336
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG-----YK--DEVLRIWKKMMSLFAK 216
+A L+ M+ + + V Y++L+S + G YK DE+ R KK++ F
Sbjct: 337 RVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR--KKIVPDFVT 394
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
YT +I L + G+ +A ++ E S D L+ Y +++ A S
Sbjct: 395 -----YTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSL 449
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
+N++V KG+ P T+ L G K G+++ E + S + P+ A N L
Sbjct: 450 HNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM--SEKGLQPNVCTYNALINGL 507
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ G+I+ A L+ + AG I Y +++ Y K G+M
Sbjct: 508 CKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEM 548
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 139/338 (41%), Gaps = 16/338 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++++ + + EAE ++ M + Y +++ + +G + ++ E+
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K PD VTY + A K F E+ + PD ++Y+ L Y K
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM 443
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + +M ++ N V Y++L+ G D + +M + N Y +
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ L K+G E+A + +E + D ++ AY ++ A ++ KG+
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL 563
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA--YNKLEEQGDID 343
+P T+ +L G+ G +E ++ I KW+ D ++ A +N L +Q I
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDG----ERLI----KWMLDKGIMPNATTFNSLMKQYCIR 615
Query: 344 GAEHLLVTLRNAGHV-----STEIYNSLLRTYAKAGKM 376
+ + H T YN L++ + KA M
Sbjct: 616 NNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM 653
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 5/317 (1%)
Query: 1 MERRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQN 58
M+R++ V S + QA + AR+ F E L ++ PD T +AL+ Y +
Sbjct: 383 MKRKKIVPDFVTYTSMIHGLCQAGKV-VEARKLFSEMLSKGLK-PDEVTYTALIDGYCKA 440
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTY 117
+ EA +L +M E G + Y +++ G++D ++L E+ +K P+V TY
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
N + + E A K E+ PD I+Y+T+ Y KM KA L+ M
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD 560
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
+ + V ++ L++ + G ++ R+ K M+ N + ++
Sbjct: 561 KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRA 620
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
IY + D NIL+ + ++ A + +V KG ++ L
Sbjct: 621 TIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIK 680
Query: 298 GYLKKGQMEKVLECFKK 314
G+ K+ + E+ + F++
Sbjct: 681 GFYKRKKFEEARKLFEE 697
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 44/337 (13%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDK-ETAEKAF 137
PL ++ + + G L + ++ +L V + NL+LA ++ D TA + F
Sbjct: 181 PLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVF 240
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E + + + +SY+ + L ++ ++A + L +ME R + V+YS ++ Y +
Sbjct: 241 REYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQV 300
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES---------- 247
+VL++ +++ K N Y +IS L K G +AE + ++
Sbjct: 301 EQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVY 360
Query: 248 ---ISGTGDPR-----------------VPNI-----LLAAYINRNQLEMAESFYNRLVT 282
ISG G VP+ ++ ++ A ++ +++
Sbjct: 361 TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
KG+KP T+ L GY K G+M++ + + + P+ TA + L + G++
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVE--KGLTPNVVTYTALVDGLCKCGEV 478
Query: 343 DGAEHLLVTLRNAG---HVSTEIYNSLLRTYAKAGKM 376
D A LL + G +V T YN+L+ K G +
Sbjct: 479 DIANELLHEMSEKGLQPNVCT--YNALINGLCKVGNI 513
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PDT + ++ +Y + + A+A L+ M + G + +N ++N + +G L+ ++
Sbjct: 530 PDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL 589
Query: 103 LQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ L K P+ T+N + +N+ + + + + PD +Y+ L + K
Sbjct: 590 IKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCK 649
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++A KEM ++ +Y+SL+ + +E +++++M
Sbjct: 650 ARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 153/340 (45%), Gaps = 6/340 (1%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLA 122
A +++ KM + G + +N ++N G++ + + E+ ++ PDV++Y+ +
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ A + ++++ P+ ++Y+T+ K L A L EM R
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ V YS++L + ++G+ +E ++ +M+ N +T ++ L K G +A ++
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ + N L+ Y NQ++ A+ + +V KG P ++ +L GY K+
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI 362
++++ + S ++ PD + L + G A +L + ++G + +
Sbjct: 386 RRLDEAKSLLVEM--SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLM 443
Query: 363 -YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
Y++LL K G + L +++ MQ+ ++ D +L
Sbjct: 444 TYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNIL 483
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 125/285 (43%), Gaps = 3/285 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ + D+ PD T S +LH + EA L +M + + + +++
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312
Query: 91 ISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G + + + + + KK P+ TYN + N + A+K + P
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
SY+ L + Y K ++A + L EM ++ + V YS+L+ +G E L ++K+
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M S + Y+ ++ L K G ++A + + D + NIL+ +
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
LE+A+ +++L GI+P T+ ++ G LK+G ++ E F+K
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 3/264 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + K P+ T +AL+ Y N + EA+ +++ M + G YN ++N Y
Sbjct: 325 FEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCK 384
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+LD+ +L E+ +K +PD VTY+ + + A F E+ + + PD ++
Sbjct: 385 RRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMT 444
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YSTL K ++A LK M++ + V Y+ L+ G + ++ K+
Sbjct: 445 YSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLF 504
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + YT +I L+K G ++A ++ + E + N+++ ++
Sbjct: 505 ADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSS 564
Query: 272 MAESFYNRLVTKGIKPCYTTWELL 295
A + +V K +T+++L
Sbjct: 565 TAIRLIDEMVGKRFSADSSTFQML 588
>gi|356577949|ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 700
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 29/321 (9%)
Query: 38 LPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
L +KM G PD TCSA++++Y + +A +L ++ + ++ ++ +Y
Sbjct: 223 LFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAATFSALIKMYS 282
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G DK ++ QE+K P+VVTYN L A A+ + E+K + PD+I
Sbjct: 283 MAGNYDKCLKVYQEMKVLGAKPNVVTYNTLLGAMLKAQKHRQAKAIYKEMKSNGVSPDFI 342
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L +Y E+A KEM+ Y+ LL++ ++GY D I+ +M
Sbjct: 343 TYACLLEVYTIAHCSEEALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAAEIFYEM 402
Query: 211 MSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
S D+ ++ +I+ + G+ +AE + +E V L+ Y +
Sbjct: 403 KSSGTCQPDSWTFSSMITMYSRSGKVSEAEGMLNEMIQSGFQPTIFVLTSLVHCYGKAKR 462
Query: 270 LEMAESFYNRLVTKGIKP----CYTTWELLTWGYLKKGQMEKVLECFKKA---IGSVRKW 322
+ + +L+ GI P C + +LT K + K+ +C +KA +GSV K+
Sbjct: 463 TDDVVKVFKQLLDLGIVPNDHFCCSLLNVLTQ--TPKEEYGKLTDCIEKANTKLGSVVKY 520
Query: 323 VPDHRLITAAYNKLEEQGDID 343
+ +EE+GD D
Sbjct: 521 L------------VEEEGDGD 529
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 127/274 (46%), Gaps = 22/274 (8%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK-MELPEKAA 169
S VV YN+ L + D E EK F E+ + + P+ ++ST+ + K +EL EK +
Sbjct: 169 SRHVVLYNVTLKLFRAVRDFEGEEKLFDEMLQRGVKPNNFTFSTMVNCANKPVELFEKMS 228
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
E + TC AY +L N+ D+ + ++ + ++ ++ A ++ +I
Sbjct: 229 GFGYEPDGITCSAMVYAY----ALSNNV---DKAVSLYDRAIAEKWCLDAATFSALIKMY 281
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G ++K +Y E + + + N LL A + + A++ Y + + G+ P +
Sbjct: 282 SMAGNYDKCLKVYQEMKVLGAKPNVVTYNTLLGAMLKAQKHRQAKAIYKEMKSNGVSPDF 341
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA-AYNKL----EEQGDIDG 344
T+ L Y + C ++A+G ++ + +TA YNKL + G D
Sbjct: 342 ITYACLLEVY-------TIAHCSEEALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDR 394
Query: 345 AEHLLVTLRNAGHVSTE--IYNSLLRTYAKAGKM 376
A + ++++G + ++S++ Y+++GK+
Sbjct: 395 AAEIFYEMKSSGTCQPDSWTFSSMITMYSRSGKV 428
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 12/320 (3%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACA 125
L +M E G + YN +++ Y G L++V + E+K PD++TYN L C
Sbjct: 311 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN-GLINCY 369
Query: 126 SQNDK-ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ +K A + F E+K + P+ ++YSTL + K + + A +M + N
Sbjct: 370 CKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNE 429
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
Y+SL+ G E ++ M+ K+N YT ++ L K G +AE ++
Sbjct: 430 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 489
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ + +V L+ YI ++E A ++ IKP + + WG+ + +
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549
Query: 305 MEK---VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+E+ +LE K S + I AY K + D A + +++ G +T
Sbjct: 550 LEETKLILEEMKSRGISANPVISTT--IIDAYFKAGKSSD---ALNFFQEMQDVGVEATI 604
Query: 362 I-YNSLLRTYAKAGKMPLII 380
+ Y L+ KAG + L +
Sbjct: 605 VTYCVLIDGLCKAGIVELAV 624
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 161/389 (41%), Gaps = 43/389 (11%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L+ Y + E +L +M + G + + YN ++N Y ++ + +
Sbjct: 322 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 381
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+K N P+VVTY+ + A + + A K F+++++T + P+ +Y++L K
Sbjct: 382 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCK 441
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+A L +M + + N V Y++LL G E +++ M+ N
Sbjct: 442 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 501
Query: 222 YTCVISSLVKLGEFEKAEN-----------------------------------IYDEWE 246
YT ++ +K E A I +E +
Sbjct: 502 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 561
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S + +P + ++ AY + A +F+ + G++ T+ +L G K G +E
Sbjct: 562 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVE 621
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNS 365
++ F + + + P+ + T+ + L + I+ A+ L ++ G + +
Sbjct: 622 LAVDYFCRMLSLGLQ--PNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTA 679
Query: 366 LLRTYAKAGKM--PLIIVERMQKDNVQMD 392
L+ K G + L+++ RM + ++ D
Sbjct: 680 LIDGNLKHGNLQEALVLISRMTELAIEFD 708
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 136/332 (40%), Gaps = 4/332 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ + + EA L+ M + G + Y +L+ G++ + ++ +
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
LK SP+ Y + E A K ++ + I PD I Y ++ +
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ L+EM+ R N V ++++ Y G + L +++M + + Y +
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L K G E A + + S+ + V L+ N +E A+ ++ + +G+
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T + L G LK G +++ L + ++ D + T+ + + G++ A
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF--DLHVYTSLVSGFSQCGELHQA 728
Query: 346 EHLLVTLRNAGHVSTEIYN-SLLRTYAKAGKM 376
+ G + E+ LLR Y K G++
Sbjct: 729 RKFFNEMIEKGILPEEVLCICLLREYYKRGQL 760
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 8/254 (3%)
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
NGQL V + + + +P V TYN+ + + D E + + F+++++ + PD +
Sbjct: 268 GNGQL--VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV 325
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y++L Y K+ E+ A+ EM+ C + + Y+ L++ Y + +M
Sbjct: 326 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 385
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ K N Y+ +I + K G + A ++ + + L+ A L
Sbjct: 386 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNL 445
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A N ++ G+K T+ L G K G+M + E F+ + P+ ++ T
Sbjct: 446 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD--GISPNQQVYT 503
Query: 331 A---AYNKLEEQGD 341
A Y K E D
Sbjct: 504 ALVHGYIKAERMED 517
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 154/349 (44%), Gaps = 6/349 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A+L K+ + E LM++M + +N ++ NG ++V ++L ++ +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PD+ Y + + E A + + + P+ + Y+T+ E ++
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM ++ C + V ++ L+ + G D V+ + ++M+S + YT VI+
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G ++A + S + I+L + + AE ++++ +G P
Sbjct: 400 GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L KKG +E+ +E K+ + V PD + + L + G + A
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII--VERMQKDNVQMDA 393
LL + N G +T IY+S+ ++ G++ +I + ++ ++ DA
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 143/323 (44%), Gaps = 6/323 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + QN L+E+M G + + Y ++N + G +D+ +L+ +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+ V+Y + L S AE+ ++ + P+ ++++TL + K L
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A LK+M C + ++YS+++ G +E L + M++ N Y+ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+L + G K ++D + + D + N ++++ R + + A F+ +V+ G
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDID 343
P +T+ +L G +G ++ E + G++RK + H I+ N +E G
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGIS---NCTQENGKQK 654
Query: 344 GAEHLLVTLRNAGHVSTEIYNSL 366
E+L + N + EI L
Sbjct: 655 CEENLTSAVDNNYKLPIEILGFL 677
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 149/373 (39%), Gaps = 13/373 (3%)
Query: 8 GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD------TCSALLHSYVQNKKS 61
G + SY A + L R E L D+M D T + L+ +N
Sbjct: 211 GCEADIVSYN---AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLW 120
++ +MSE G Y +++ G L+ ++L + P+VV YN
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
L S + AE+ E+ + D ++++ L + + L ++ L++M C
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ + Y+++++ + G DE + + K M S K N YT V+ L G + AE
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ + +P N L+ + +E A +++ G P ++ + G
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
K G+ E+ LE + + P+ + ++ L +G ++ + +++ S
Sbjct: 508 KAGKTEEALELLNVMVN--KGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565
Query: 361 EI-YNSLLRTYAK 372
+ YN+++ + K
Sbjct: 566 AVLYNAVISSLCK 578
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 115/293 (39%), Gaps = 4/293 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N +LN G +D+ +L++L D+V+YN L E+ E+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P+ ++++TL + L E+ L +M + C + Y++++ G+ +
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
I +M S K N Y V+ L +++AE + E D NIL+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ ++ ++++ G P T+ + G+ K+G +++ + K K
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK- 423
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
P+ T L G AE L+ + G + +N+L+ K G
Sbjct: 424 -PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 150/351 (42%), Gaps = 39/351 (11%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWL 121
EA ++E M+ L YN ++N + ++G++D+ ++ E++K N PDVVTYN +
Sbjct: 301 EATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLI 360
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
C+ D E+ K + + ++Y+ + K +A TTL +ME+
Sbjct: 361 DGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLS 420
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN-----------------DAEYTC 224
+ V Y++L+ Y G + R+ +M S K++ D Y
Sbjct: 421 PDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNL 480
Query: 225 VISS-------------LVKLGEF-----EKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ S+ ++ LG F ++A N++DE + N ++
Sbjct: 481 LCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQ 540
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+++ A N ++ G+ P TT+ ++ G+ +G +EK + + I ++ K PD
Sbjct: 541 SRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFK--PDV 598
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
L +G ++ A L TL + G + YN+++ + K GK
Sbjct: 599 YTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKF 649
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 11/297 (3%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC-PLP 82
+A + R LPD + T + L+ Q + S+E +L+E+M + G +KC +
Sbjct: 336 EAFRIRDEMEKMNVLPDVV----TYNTLIDGCSQWRDSSEVYSLIEEMDKKG-VKCNAVT 390
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLEL- 140
YN +L G + + L ++++N SPD VTYN + A A + E+
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT 450
Query: 141 -KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
K KID W + L L ++ +L E A L KR + V+Y L+ Y
Sbjct: 451 SKGLKIDT-WTLNTILHCLCVEKKLDE-AYNLLCSASKRGYILDEVSYGILILGYFKDEK 508
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
D L +W +M + Y VI L + + ++A + +E D NI
Sbjct: 509 GDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNI 568
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ + +E A F+N ++ KP T +L G ++G +EK L+ F +
Sbjct: 569 IIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLV 625
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 1/240 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +LH KK EA L+ S+ G++ + Y ++ Y + + D+ + E+
Sbjct: 460 TLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEM 519
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + P +TYN + + A E+ + + PD +Y+ + +
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV 579
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA EM + + + + LL G ++ L+++ ++S ++ Y +
Sbjct: 580 EKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
ISSL K G+FE A ++ E E+ D +++AA + +++ AE F ++V GI
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 5/255 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P+T S L++ Y K +A + KMSE G + + YN +L+ + L + +
Sbjct: 211 PNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDL 270
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L ++K K SP+ TYN+ + + A K + + + P +Y+ L + +
Sbjct: 271 LLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCN 330
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
++A EMEK + V Y++L+ + EV + ++M K N
Sbjct: 331 DGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVT 390
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y ++ + K G +A D+ E + D N L+ AY ++ A + +
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT 450
Query: 282 TKGIKPCYTTWELLT 296
+KG+K TW L T
Sbjct: 451 SKGLK--IDTWTLNT 463
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 152/376 (40%), Gaps = 51/376 (13%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+H Q +K EA L EKM+E G + Y+ +L Y NG +D+ ++
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID--------------- 146
E+ K +P+VVTY + ++ + A E+K+ +
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503
Query: 147 --------------------PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
P ++Y+++ + +IK + A ++M + N V
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVT 563
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+S + Y D L++ + + + A Y +I + G A +
Sbjct: 564 YTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL---- 619
Query: 247 SISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ D +PNI + Y N +E A Y +++ +GI T+ L G+ K
Sbjct: 620 -VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSK 678
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RNAGHVST 360
G + L+ + + + + +PDH TA + L GDID A LL + R +
Sbjct: 679 DGNVTFALKLYSEMVA--KGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736
Query: 361 EIYNSLLRTYAKAGKM 376
+YN L+ Y + GK+
Sbjct: 737 LMYNMLINGYLRNGKL 752
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 155/381 (40%), Gaps = 18/381 (4%)
Query: 29 RARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
+A + F E L D + D T + L+ + +A L +M + G L +N ++
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 88 NLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
+++ + +E+ + PD TYN+ + + A + ++ +T + P
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
++Y +L Y ++A EM + N V Y++L+ + N D+ +
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINR 267
+M ND Y +I+ L +G + + +E+ N ++ +I
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR--KWVPD 325
+ A + Y ++ KGI P T+ GY K + L K + VR PD
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL----KMLNDVRCKGLRPD 595
Query: 326 HRLITAAYNKLE----EQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PL 378
AAYN L ++G++ A +LV + G + + +YNS + Y M L
Sbjct: 596 ----IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651
Query: 379 IIVERMQKDNVQMDAETQKVL 399
+ E+M K+ + +D T L
Sbjct: 652 RLYEKMIKEGIDLDTATYTTL 672
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 3/280 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + E ++++ GF+ + YN ++N +I G + + Q++
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P++VTY ++ + + A K +++ + PD +Y++L + +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L M K N Y+S ++ Y N+ +E LR+++KM+ ++ A YT +
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G A +Y E + D L ++ A + + I
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+P + +L GYL+ G++++ + + RK +PD
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLE--RKIMPD 770
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 147/359 (40%), Gaps = 31/359 (8%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F+ +P PD CS + S + + + A ++ KM + GF+ +N ++++ +
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLV 258
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++++ + E L VV + Q + A F E + + P +
Sbjct: 259 KGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDV 318
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ L + +PEKA ++M + ++ ++ N ++WK
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLND-------KLWKDA 371
Query: 211 MSLFAKMNDA------EYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVP--NILL 261
+SLF +M D+ Y +I L + + +A N+ WE ++ TG P + + LL
Sbjct: 372 VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNL---WEKMNETGVKPYIVTYHSLL 428
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLECFKKAIGS 318
Y ++ A Y + KG P T+ L G++ K +K +L K+ S
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ + + N L G + +L G V T + YNS++ + KAG M
Sbjct: 489 CNDYTYNTLI-----NGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++++ +++ A A+ ++M G + Y ++ Y D +ML ++
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDV 587
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PD+ YN + + + A + + + K + P+ Y++ + Y +++
Sbjct: 588 RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A ++M K + Y++L+ ++ G L+++ +M++ + +T +
Sbjct: 648 EEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
L + G+ + A + DE + + + N+L+ Y+ +L+ A ++ ++ + I
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767
Query: 286 KPCYTTWELLT 296
P TT+++L
Sbjct: 768 MPDDTTYDILV 778
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 33/288 (11%)
Query: 105 ELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E++ P D +++ + AC + + A + F E+ ++I+PD S + K+
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A L++M+ ++S++ + G +E L I ++++ KM+ T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-----NILLAAYINRNQLEMAESFYN 278
++ E KA +I++E D VP +L+ E A
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLR-----DGLVPTDVTYTVLIRGCTEEGMPEKAYELCR 341
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS----------VRKWVPDHRL 328
++ G+ P + ++ G L + + FK+ S + W+ R
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRK 401
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
I A N E+ + G + +VT Y+SLL Y G M
Sbjct: 402 IREALNLWEKMNET-GVKPYIVT-----------YHSLLLCYCVNGCM 437
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 156/366 (42%), Gaps = 17/366 (4%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L+H + EA L E+++E G + YN ++N Y G +VP++
Sbjct: 271 PDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKI 330
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+Q ++ + PD+VTY + +A D E K ++ + + ++YS L + K
Sbjct: 331 IQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFK 390
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDA 220
L +A L E+ + +AYS L+ Y +G + L + M S
Sbjct: 391 KGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSL 450
Query: 221 EYTCVISSLVKLGEFEKA----ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ ++ L K G +A EN+ +++ GD + N+++ Y + A
Sbjct: 451 NHLSILVGLCKKGLLVEARWYLENVAVKYQP----GDVVLYNVVIDGYAKIGDISNAVGL 506
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
Y+++V G+ P T + +GY K G ++ E + +AI + +P T + L
Sbjct: 507 YDQIVIAGMFPTIVTCNSILYGYCKCGDLQAA-ESYFRAI-QISSLLPTMVTYTTLMDAL 564
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDA 393
E G ++ +L + G I Y+ +++ K + + ++ M + V D
Sbjct: 565 SEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADP 624
Query: 394 ETQKVL 399
T L
Sbjct: 625 VTYNTL 630
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 17/285 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKC-----PLPYNHMLNLY--ISNGQLDKVPQ 101
S L+H Y K E E +E C + C P NH+ L G L +
Sbjct: 417 SILIHGYC---KLGEIERALEV---CDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARW 470
Query: 102 MLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
L+ + P DVV YN+ + A D A + ++ + P ++ +++ Y
Sbjct: 471 YLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYC 530
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K + A + + ++ + V Y++L+ + G + +L I +M+ K N
Sbjct: 531 KCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAI 590
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y+ VI L K F A + D DP N L+ + ++MA ++R+
Sbjct: 591 TYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRM 650
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQM---EKVLECFKKAIGSVRKW 322
V GI P T+ L KGQ+ E +LE ++ +RK+
Sbjct: 651 VYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKF 695
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 111/246 (45%), Gaps = 2/246 (0%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT--SPDVVTYNLWLAAC 124
L E+M G K ++ +++ ++ + LQE +K P +++N+ ++A
Sbjct: 189 LFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSAL 248
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
+ + A+ + K ++PD +YSTL K+ ++A + + + +
Sbjct: 249 CNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLET 308
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
V Y+SL++ Y +G EV +I + M + + YT +I+ + G+ E+ I ++
Sbjct: 309 VTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRND 368
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ ++LL A + + AE+ + + G+ + +L GY K G+
Sbjct: 369 ILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGE 428
Query: 305 MEKVLE 310
+E+ LE
Sbjct: 429 IERALE 434
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 4/273 (1%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
LK +PD TY+ + + A F + + + + ++Y++L + Y + L
Sbjct: 265 LKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLT 324
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ ++ M + + V Y+ L++ + G +E ++I ++ ++N Y+ +
Sbjct: 325 REVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVL 384
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL-VTKG 284
+++L K G +AEN+ E SI D +IL+ Y ++E A + + ++
Sbjct: 385 LNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQK 444
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P + G KKG + + + +V+ D L + + GDI
Sbjct: 445 VVPTSLNHLSILVGLCKKGLLVEARWYLENV--AVKYQPGDVVLYNVVIDGYAKIGDISN 502
Query: 345 AEHLLVTLRNAGHVSTEIY-NSLLRTYAKAGKM 376
A L + AG T + NS+L Y K G +
Sbjct: 503 AVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDL 535
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 115/297 (38%), Gaps = 14/297 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y G + + ++ P +VT N L D + AE F ++
Sbjct: 487 YNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQ 546
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL-SLYTNMGYK 200
+ + P ++Y+TL + + L EM ++ + N + YS ++ L + +
Sbjct: 547 ISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFH 606
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D + M + Y +I ++ + + A +I+D P N L
Sbjct: 607 DAI-HFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFL 665
Query: 261 LAAYINRNQLEMAESFYNRLVTKGI---KPCYTTWELLTWGYLKKGQMEKVLECFKKAI- 316
+ + Q+ AE L +GI K YTT L KG + + F K +
Sbjct: 666 INVLCLKGQVIQAEYLLESLRERGIELRKFAYTT---LIKAECAKGMPYEAISLFGKLLD 722
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
V D +AA N+L ++ A + + +AG T++Y L+R K
Sbjct: 723 DGFETTVKD---FSAAINRLCKRKFAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQK 776
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 12/175 (6%)
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
DP I + L + Y + ++ A L +M + + Y SLL + D L
Sbjct: 132 DPSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLL---YGLRMTDMALE 188
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-----NIL 260
++++M + ++ ++ +I L K + +A + E G+ P N+L
Sbjct: 189 LFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARK----GERFKPLGMSFNVL 244
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
++A N ++ A+SF ++ G+ P T+ L G K G +++ ++ F++
Sbjct: 245 MSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERV 299
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 40/343 (11%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + ++ S +++++ EA +M + G + Y+ +L+ + + GQL++ +
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268
Query: 103 L-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI- 160
Q + +N P+ VT+ + + + A + F + + ++PD +YS L Y
Sbjct: 269 FKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCL 328
Query: 161 --KMELPEK--------------------------------AATTLKEMEKRTCRKNRVA 186
+M+ +K A T L EM R + V
Sbjct: 329 QSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVT 388
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
YS+L+ + G +++K+M S + Y+ ++ L K G ++A + +
Sbjct: 389 YSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQ 448
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ NIL+ N +LE A ++ L KGI+P T+ ++ G LK+G
Sbjct: 449 ESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSN 508
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ E F+K + V +P+ A GD A L+
Sbjct: 509 EACEMFRKMV--VNGCLPNSCTYNVAIQGFLRNGDPSNAVRLI 549
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 141/334 (42%), Gaps = 8/334 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T LL+ K +A L +++ + GF + Y ++ G Q+L+++
Sbjct: 143 TFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM 202
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PDVV YN + + A F E+ I P+ ++YS++ + +
Sbjct: 203 EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL 262
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + K+M R N V ++ L+ G E R+++ M + + Y+ +
Sbjct: 263 NEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ + ++A+ ++D RV NIL+ + +L A++ + + + +
Sbjct: 323 MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G+ + G+ + + FK+ +PD + + L + G +D A
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS--YGLLPDSITYSILLDGLCKHGHLDEA 440
Query: 346 EHLLVTLRNAG---HVSTEIYNSLLRTYAKAGKM 376
LL ++ + H+ IYN L++ GK+
Sbjct: 441 FRLLKAMQESKIEPHIC--IYNILIQGMCNFGKL 472
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLA 122
A + + KM + G + + +LN S ++ ++ E+ K +P ++TY +
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
A + ++++ PD ++Y+T+ K +A EM +
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N V YSS+L + N+G +E ++K+M+ N +T ++ L K G +A ++
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ D + L+ Y ++Q++ A+ ++ +V KG P + +L G+ K
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCK 363
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 13/276 (4%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P VT+ L S+ A K F E+ K P I+Y+T+ K+
Sbjct: 133 FKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHT 192
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A LK+ME++ C+ + VAY++++ +E + + +M+ N Y+ +
Sbjct: 193 TNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSI 252
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-----ILLAAYINRNQLEMAESFYNRL 280
+ LG+ +A +++ + G +PN IL+ + A + +
Sbjct: 253 LHGFCNLGQLNEATSLFKQM-----IGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
G++P T+ L GY + QM++ + F +G + + P R+ N +
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVG--KGFAPSVRVYNILINGHCKSR 365
Query: 341 DIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
++ A+ LL + + T Y++L++ + +AG+
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 3/264 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + + PD T SAL+ Y + EA+ L + M GF YN ++N +
Sbjct: 304 FEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCK 363
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ +L++ +L E+ ++ +PD VTY+ + + A+K F E+ + PD I+
Sbjct: 364 SRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
YS L K ++A LK M++ + Y+ L+ N G + ++ +
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF 483
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ + YT +IS L+K G +A ++ + + N+ + ++
Sbjct: 484 VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPS 543
Query: 272 MAESFYNRLVTKGIKPCYTTWELL 295
A +V +G +T+++L
Sbjct: 544 NAVRLIEEMVGRGFSADSSTFQML 567
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 113/283 (39%), Gaps = 5/283 (1%)
Query: 97 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
D V Q L P VV +N L + + T ++ + I P+ + + L
Sbjct: 52 DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILI 111
Query: 157 SL--YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
+ + + A + L +M K + V + +LL+ + + ++++ ++ +
Sbjct: 112 NCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG 171
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
+ YT +I L K+G A + + E D N ++ + + A
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231
Query: 275 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 334
F++ +V +GI P T+ + G+ GQ+ + FK+ IG R +P+ T +
Sbjct: 232 YFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG--RNVMPNTVTFTILVD 289
Query: 335 KLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
L ++G I A + + N Y++L+ Y +M
Sbjct: 290 GLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQM 332
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 90/216 (41%), Gaps = 9/216 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L++ + ++++ EA+ L+ +M + + Y+ ++ + G+ PQ+ Q+L K
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR----PQVAQKLFKEM 412
Query: 111 S-----PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
PD +TY++ L + A + ++++KI+P Y+ L
Sbjct: 413 CSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKL 472
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + + + + V Y+ ++S G +E +++KM+ N Y
Sbjct: 473 EAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVA 532
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
I ++ G+ A + +E + D +LL
Sbjct: 533 IQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 40 DKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
D+ PDT S L+ + Q + A+ L ++M G L + Y+ +L+ +G LD
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLD 438
Query: 98 KVPQMLQELK------------------------------------KNTSPDVVTYNLWL 121
+ ++L+ ++ K P VVTY + +
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + A + F ++ P+ +Y+ +++ P A ++EM R
Sbjct: 499 SGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFS 558
Query: 182 KNRVAYSSLLSLYTNMGYKDEVL 204
+ + LL L +N DE++
Sbjct: 559 ADSSTFQMLLDLESN----DEII 577
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 13/333 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-LDKVPQMLQELK 107
+ +LH+Y + K +A L E+M E G + YN +L+++ G+ K+ +L E++
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K D T + L+ACA + A++ F ELK +P ++Y+ L ++ K +
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + LKEME+ +C + V Y+ L++ Y G+ E + + M N YT VI
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ K G+ ++A ++ + + N +L+ +++ + + G
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDH---RLITAAYNKLEEQGD 341
P TW + KG + V F+ K+ G + PD + +AY + +
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCG----FEPDRDTFNTLISAYGRCGSE-- 507
Query: 342 IDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+D ++ R + YN+LL A+ G
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 139/341 (40%), Gaps = 41/341 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TCS +L + + EA+ ++ CG+ + YN +L ++ G + +L+E+
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 107 KKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++N+ P D VTYN +AA + A + K + P+ I+Y+T+ Y K
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A M++ C N Y+++LSL +E++++ M S N A + +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ G + ++ E +S D N L++AY A Y + G
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
C TT+ A N L +GD
Sbjct: 523 NACVTTY-------------------------------------NALLNALARKGDWRSG 545
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLIIVERMQ 385
E+++ +++ G TE Y+ +L+ YAK G + +ER++
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGN--YLGIERIE 584
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 164/388 (42%), Gaps = 45/388 (11%)
Query: 29 RARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPY 83
R + FF L P T + ALL + + EA +++++M E CP + Y
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN---SCPADSVTY 354
Query: 84 NHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ++ Y+ G + +++ + KK P+ +TY + A ++ A K F +K+
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P+ +Y+ + SL K + L +M+ C NR ++++L+L N G
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
V R++++M S + + + +IS+ + G A +Y E N LL
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ---MEKV----------- 308
A + E+ + + +KG KP T++ L+ Y K G +E++
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Query: 309 ---------LECFK-KAI-GSVRKWV--------PDHRLITAAYNKLEEQGDIDGAEHLL 349
L FK +A+ GS R + PD + + + D AE +L
Sbjct: 595 SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL 654
Query: 350 VTLRNAGHVSTEI--YNSLLRTYAKAGK 375
++R G +S ++ YNSL+ Y + G+
Sbjct: 655 ESIREDG-LSPDLVTYNSLMDMYVRRGE 681
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 8/280 (2%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD+ DT + L+ +Y + +A + +M+ GF C YN +LN G
Sbjct: 489 PDR----DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS 544
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ ++K K P +Y+L L A + E+ +K+ +I P W+ TL
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K + +K + + V ++S+LS++T D+ I + +
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y ++ V+ GE KAE I E D N ++ + R ++ A
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKK 314
+ + +GI+PC T+ GY G ++E V+EC K
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ML+++ N D+ +L+ ++++ SPD+VTYN + + + AE+ L+
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K+++ PD +SY+T+ + + L ++A L EM +R R Y++ +S YT MG
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
E+ + + M + N+ + V+ + G++ +A
Sbjct: 754 EIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 155/392 (39%), Gaps = 41/392 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ +Y + K EA L M E G + YN +L+L + +++ +ML ++
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N SP+ T+N LA C ++ + + F E+K +PD +++TL S Y +
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A+ EM + Y++LL+ G + M S K + Y+ +
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 226 ISSLVKLGEF---EKAEN------IYDEW-------------ESISGT------------ 251
+ K G + E+ EN I+ W +++G+
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 252 -GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D + N +L+ + N + AE + G+ P T+ L Y+++G+ K E
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 369
K S K PD +G + A +L + G YN+ +
Sbjct: 688 ILKTLEKSQLK--PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 370 YAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
Y G I ++E M K++ + + T K++
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMV 777
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K PD+V +N L+ N + AE +++ + PD ++Y++L +Y++
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA LK +EK + + V+Y++++ + G E +R+ +M + Y +
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S +G F + E++ + + +++ Y + A F +++ K
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFD 801
Query: 287 PCY 289
PC+
Sbjct: 802 PCF 804
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 22/239 (9%)
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y+T+ Y + EKA + M++ V Y+ +L ++ MG R W
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG------RSW 262
Query: 208 KKMMSLFAKMNDA-----EYTC--VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+K++ + +M E+TC V+S+ + G +A+ + E +S N L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIG 317
L + A S + T+ L Y++ G + V+E K
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK--- 379
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 375
+ +P+ T + + G D A L +++ AG V +T YN++L K +
Sbjct: 380 --KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 155/377 (41%), Gaps = 19/377 (5%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+A+ Q L E++ +P +G ALL +YV +AE + K+ + F
Sbjct: 220 IAKVQGLHKA--ESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLEFPMS 277
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
YN ML LY + +L K+N P TY + + ND E+
Sbjct: 278 IFAYNQMLVLYKKIDRRKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGMEQVVDS 337
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+K I+ D + S L Y+ L KA LKE+E+ + LL Y +
Sbjct: 338 MKAEGIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRILLPFYGKLQM 397
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----WESISGTGDPR 255
+DEV R+W+ A + E I + +L ++AE I+D W+ +S R
Sbjct: 398 EDEVRRLWEICE---ANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLSA----R 450
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
+I++ Y + L + N++ G T + Y++ G++EK KA
Sbjct: 451 HYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFLVKA 510
Query: 316 IG--SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
+ ++ ++ + Y + +GD+ AE + +R + ++ + +L++ Y
Sbjct: 511 VKKYGMKPLFTSYKTLMDHYAR---RGDVHNAEKIFDKMRQSSYIPRLGQFGTLIQAYVN 567
Query: 373 AGKMPLIIVERMQKDNV 389
A + ERM D V
Sbjct: 568 AKTPAYGMRERMMADKV 584
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 4/247 (1%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
G T A++ V+ + +A + E+M G + Y+ ++ + +G++D ++
Sbjct: 222 GVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVW 281
Query: 104 QELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ + + P+VV Y+ + A+ AE F E+ +K P+ I+Y ++ Y K+
Sbjct: 282 EAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKI 341
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+A + +EM C N V+YS L++ N+G + + +WK M+ + Y
Sbjct: 342 GDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAY 401
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRL 280
T +I L G + ++ + + SG DP V N+LL + L A NR+
Sbjct: 402 TSMIKGLCVSGMVDGGLRLFYDMLA-SGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRM 460
Query: 281 VTKGIKP 287
+ +G P
Sbjct: 461 LDQGCDP 467
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 148/371 (39%), Gaps = 22/371 (5%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PDK T S ++ + + +A AL+ +M G + +N +L + G +
Sbjct: 117 PDKF----TYSTVVSALADAGRVDDAVALVHEMVADGVVAAE-AFNPVLRAMLRAGDVKG 171
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ + ++ K P TYN+ + A +++ + P ++Y +
Sbjct: 172 AAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVD 231
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++ + A +EME+ +N YS++++ + G D L++W+ M++ +
Sbjct: 232 GLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRP 291
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL-----LAAYINRNQLEM 272
N Y+ +I L G+ +AE ++ E PNI+ + Y
Sbjct: 292 NVVLYSAMIGGLANFGKMTEAELLFREM-----IDSKCAPNIITYGSMIQGYFKIGDTSR 346
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
A S + ++ G P ++ +L G G+++ + +K + R PD T+
Sbjct: 347 ALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLD--RGCAPDTIAYTSM 404
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKMP--LIIVERMQKDN 388
L G +DG L + +GH ++ YN LL A +P + ++ RM
Sbjct: 405 IKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQG 464
Query: 389 VQMDAETQKVL 399
D T +
Sbjct: 465 CDPDTVTCNIF 475
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 148/334 (44%), Gaps = 6/334 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
TC+ L+ ++ + EA L+E M + GF + Y +++ + +NG LD+ ++ E
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K S +VVTY+ + + A + + I PD ++Y+ L K
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L M ++ + V Y+ LLS G + +I + M+ K + Y +
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRV--PNILLAAYINRNQLEMAESFYNRLVTK 283
+ L G+ ++A +++ +P V N+L+ +L A + ++V K
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G T+ +L G LK G++++ +E +K+ + +VP+ + + + ++
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD--LGFVPNSFTYSILIDGFCKMRMLN 513
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
A+ L +R G + + YN+L+ + K G +
Sbjct: 514 IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 547
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 8/342 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQ 101
PD T + L+ ++ ++ A L+ M E G + YN +L+ G +D
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 376
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL--KKTKIDPDWISYSTLTSLY 159
+ ++K DVVTYN + + + A K F + + ++P+ +++ L
Sbjct: 377 LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 436
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K KA ++M K+ N V Y+ LL G E + +WK+++ L N
Sbjct: 437 CKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS 496
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y+ +I K+ A+ ++ E + N L+A+ LE A+S +
Sbjct: 497 FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 556
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +P ++ + G LK G + V E K + + PD + N+L +
Sbjct: 557 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR--PDALTFSTLINRLSKL 614
Query: 340 GDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLII 380
G++D A+ L + +G +Y+SLL+ + G II
Sbjct: 615 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 656
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 8/333 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
SAL+ + +K ++ + + GF N +L NG + + +++E+ +
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172
Query: 108 KNTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K+ SPD+V+YN + C ++ KE A LE++ P+ ++ +TL K +
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKE-AVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD 231
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L+ M+K+ + V Y +L+S + N G D ++ +M+ N Y+C++
Sbjct: 232 EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLV 291
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L +LG++++A + + D L+ + A N +V KG +
Sbjct: 292 HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE 351
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ +L G K+G + + + I +K D L ++G +D A
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK--ADVVTYNTLMKGLCDKGKVDEAL 409
Query: 347 HLLVTL---RNAGHVSTEIYNSLLRTYAKAGKM 376
L ++ N + +N L+ K G++
Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 442
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACAS 126
M K CG L + YN +L + G++ + ++ Q L P+ TY++ +
Sbjct: 452 MVKKGSCGNL---VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 508
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
A+ F E++ ++P Y+TL + K E+A + +EM C + ++
Sbjct: 509 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 568
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
+++++ G V + KM+ + + + ++ +I+ L KLGE ++A++ +
Sbjct: 569 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 628
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+ T D V + LL ++ + +++ KG
Sbjct: 629 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 6/298 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN M+ + + GQ +KV ++ E+ + + PD +TY+ ++A +++A + E+
Sbjct: 197 YNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEM 256
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K + P Y+ L +L+ K+ A + +EM + CR + Y+ L+ G
Sbjct: 257 KDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 316
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-I 259
DE + +M + + +I+ L K G + A ++ E ++ N I
Sbjct: 317 DEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTI 376
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
+ A + ++++ S++ R+ GI P T+ +L G+ K +MEK + ++
Sbjct: 377 IKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM--DE 434
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
+ + P + + L + D A L L+ N G S+ +Y +++ KAG++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRL 492
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 4/284 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + + PD T + L+ + + EA +M G + N+M+N
Sbjct: 286 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFL 345
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPD 148
G+LD ++ QE+ P VVTYN + A + + ++ E +K++ I P
Sbjct: 346 GKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 405
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS L + K EKA L+EM+++ AY SL+ D +++
Sbjct: 406 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 465
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
++ + Y +I L K G + A N++DE + D N L++
Sbjct: 466 ELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTG 525
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
L+ A S R+ G P ++ ++ G K+ + CF
Sbjct: 526 MLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDLIVQWRCF 569
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 136/329 (41%), Gaps = 17/329 (5%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ Y+ +++ + G+ D Q+L E+K N P Y + +A ND A F E
Sbjct: 231 MTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEE 290
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++ PD +Y+ L K ++A EM++ CR + + +++++ G
Sbjct: 291 MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGR 350
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG---DPRV 256
D+ ++++++M +L + Y +I +L + +A + +E + +G
Sbjct: 351 LDDAMKLFQEMGTLRCIPSVVTYNTIIKALFE--SKSRASEVPSWFERMKESGISPSSFT 408
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF---K 313
+IL+ + N++E A + KG PC + L K + + E F K
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
+ GS R+ L + G +D A ++ + G YN+L+ A+
Sbjct: 469 ENCGS-----SSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523
Query: 373 AGKM--PLIIVERMQKDNVQMDAETQKVL 399
G + L + RMQ+ D + ++
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNII 552
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA-EYTCV 225
KA +++ R C+ AY+S++ + + G ++V ++ +M + D Y+ +
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSAL 236
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+ KLG + A + +E + ++ +L+A + N + A S + + +
Sbjct: 237 ISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYC 296
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P T+ L G K G++++ F + PD ++ N L + G +D A
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFFYEM--QREGCRPDTIVMNNMINFLGKAGRLDDA 354
Query: 346 EHL---LVTLRNAGHVST--EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVL 399
L + TLR V T I +L + ++A ++P ERM++ + + T +L
Sbjct: 355 MKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWF-ERMKESGISPSSFTYSIL 412
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 6/286 (2%)
Query: 112 PDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
P V++YN L A S+ + AE F E+ ++++ P+ +Y+ L + + A T
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ME + C N V Y++L+ Y + D+ ++ + M + N Y VI+ L
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
+ G ++ + E + D N L+ Y A + ++ G+ P
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
T+ L K G M + +E + VR P+ R T + ++G ++ A +L
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQM--RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 351 TLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDA 393
+ + G S YN+L+ + GKM + ++E M++ + D
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 133/303 (43%), Gaps = 3/303 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y + +K + L+ M+ G + YN ++N G++ +V +L E+
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ S D VTYN + + + A E+ + + P I+Y++L K
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L +M R N Y++L+ ++ GY +E R+ ++M + Y +
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ G+ E A + ++ + + D + +L+ + ++ A +V KGI
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP T+ L G+ ++ + ++ + +++ + PD TA N +GD++ A
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV--GLPPDEFTYTALINAYCMEGDLEKA 539
Query: 346 EHL 348
L
Sbjct: 540 LQL 542
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y + +A + +M G + Y +++ G +++ + L ++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + P+ TY + + + A + E+ P ++Y+ L + +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A L++M+++ + V+YS++LS + DE LR+ ++M+ K + Y+ +
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + ++A ++Y+E + D L+ AY LE A +N +V KG+
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 286 KPCYTTWELLTWGYLKKGQ 304
P T+ +L G K+ +
Sbjct: 552 LPDVVTYSVLINGLNKQSR 570
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 113/270 (41%), Gaps = 2/270 (0%)
Query: 42 MRGPDTCSALLHSYVQNKKSAE-AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 100
M G + +A+L + +++K++ AE + ++M E YN ++ + G +D
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 101 QMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
+ +++ K P+VVTYN + + K + ++P+ ISY+ + +
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
+ ++ + L EM +R + V Y++L+ Y G + L + +M+ +
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
YT +I S+ K G +A D+ + R L+ + + + A
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ G P T+ L G+ G+ME +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 128/284 (45%), Gaps = 3/284 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F + K PD T ++L+ + EA AL+ +M + + +N +++
Sbjct: 259 DIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G++ + +L+ + + PDVVTY+ + + +++ A K F + PD
Sbjct: 319 CKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDV 378
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
SY+ L + Y K++ ++A EM + N V+Y++L+ +G E ++K
Sbjct: 379 FSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKN 438
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + N Y+ ++ K G F KA ++ +S + + NIL+ A
Sbjct: 439 MHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN 498
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
L A ++ L KG++P + + G K+G +++ LE F+
Sbjct: 499 LRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFR 542
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 142/327 (43%), Gaps = 6/327 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++ S+ ++++ EA + M G YN ++ + Q + +L E+
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM 299
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY-IKMEL 164
+ N PD+VT+N+ + + A+ + + ++PD ++YS+L Y ++ E+
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E A M + C+ + +Y+ L++ Y + DE +++ +M+ N+ Y
Sbjct: 360 VE-ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNT 418
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L +LG +A N++ + + +ILL + + A + + +
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
KP + +L K G + + F + V+ P+ ++ T N L ++G +D
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELF--VKGLQPNAQIYTTIINGLCKEGLLDE 536
Query: 345 AEHLLVTLRNAGHVSTEI-YNSLLRTY 370
A + G EI YN ++R +
Sbjct: 537 ALEAFRNMEEDGCPPDEISYNVIIRGF 563
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/330 (17%), Positives = 140/330 (42%), Gaps = 4/330 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L++ + ++ A +++ K+ + G + + ++N G+ + ++ ++
Sbjct: 135 TLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PDV TY + + A ++++ P+ ++YST+ + K
Sbjct: 195 VARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRV 254
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A M+ + + Y+SL+ N E + +M SL + + +
Sbjct: 255 NEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVL 314
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ ++ K G+ +A+ + + D + L+ Y R+++ A ++ ++TKG
Sbjct: 315 VDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGC 374
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP ++ +L GY K ++++ + F + I + P++ + L + G + A
Sbjct: 375 KPDVFSYNILINGYCKVKRIDEAKQLFNEMIH--QGLTPNNVSYNTLIHGLCQLGSLREA 432
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+L + G++ Y+ LL + K G
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 106/268 (39%), Gaps = 7/268 (2%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
+V++AQ + E E PD + T S+L++ Y + EA L + M G
Sbjct: 323 KVSEAQGVLKTMTEMGVE--PDVV----TYSSLMYGYSLRSEVVEARKLFDAMITKGCKP 376
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
YN ++N Y ++D+ Q+ E + + +P+ V+YN + A F
Sbjct: 377 DVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLF 436
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+ P+ +YS L + K KA + M+ + N V Y+ L+
Sbjct: 437 KNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKS 496
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G + +++ ++ + N YT +I+ L K G ++A + E D
Sbjct: 497 GNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISY 556
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGI 285
N+++ +++ A + KG
Sbjct: 557 NVIIRGFLHHKDESRAVQLIGEMRDKGF 584
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 152/381 (39%), Gaps = 54/381 (14%)
Query: 37 NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 96
N DK + D CS + +A A M L C + + +L+ + GQ
Sbjct: 62 NRRDKRKHDDACSF--------RNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQY 113
Query: 97 -DKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
D V + ++++ SP++ T ++ + + + A ++ K + P ++++T
Sbjct: 114 YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTT 173
Query: 155 LTSLYIK-------MEL----------PE------------------KAATTLKEMEKRT 179
L + K MEL P+ AA LK+ME+
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG 233
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C+ N V YS+++ + +E L I+ M + Y +I L ++++A
Sbjct: 234 CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEAS 293
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
+ +E S++ D N+L+ ++ A+ + G++P T+ L +GY
Sbjct: 294 ALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGY 353
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+ ++ + + F I + PD + ++ Y K++ ID A+ L + + G
Sbjct: 354 SLRSEVVEARKLFDAMI--TKGCKPDVFSYNILINGYCKVKR---IDEAKQLFNEMIHQG 408
Query: 357 HVSTEI-YNSLLRTYAKAGKM 376
+ YN+L+ + G +
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSL 429
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 154/349 (44%), Gaps = 6/349 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A+L K+ + E LM++M + +N ++ NG ++V ++L ++ +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PD+ Y + + E A + + + P+ + Y+T+ E ++
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM ++ C + V ++ L+ + G D V+ + ++M+S + YT VI+
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G ++A + S + I+L + + AE ++++ +G P
Sbjct: 400 GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L KKG +E+ +E K+ + V PD + + L + G + A
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII--VERMQKDNVQMDA 393
LL + N G +T IY+S+ ++ G++ +I + ++ ++ DA
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ + QN L+E+M G + + Y ++N + G +D+ +L+ +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ V+Y + L S AE+ ++ + P+ ++++TL + K L E+A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M C + ++YS+++ G +E L + M++ N Y+ + +L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G K ++D + + D + N ++++ R + + A F+ +V+ G P
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDH 326
+T+ +L G +G ++ E + G++RK + H
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRH 640
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 135/328 (41%), Gaps = 4/328 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ +N ++ +MSE G Y +++ G L+ ++L +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+VV YN L S + AE+ E+ + D ++++ L + + L
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ L++M C + + Y+++++ + G DE + + K M S K N YT V
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L G + AE + + +P N L+ + +E A +++ G
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P ++ + G K G+ E+ LE + + P+ + ++ L +G ++
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVN--KGISPNTIIYSSIACALSREGRVNKV 550
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ +++ S + YN+++ + K
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCK 578
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 115/293 (39%), Gaps = 4/293 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N +LN G +D+ +L++L D+V+YN L E+ E+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P+ ++++TL + L E+ L +M + C + Y++++ G+ +
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
I +M S K N Y V+ L +++AE + E D NIL+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ ++ ++++ G P T+ + G+ K+G +++ + K K
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK- 423
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
P+ T L G AE L+ + G + +N+L+ K G
Sbjct: 424 -PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 154/349 (44%), Gaps = 6/349 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A+L K+ + E LM++M + +N ++ NG ++V ++L ++ +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PD+ Y + + E A + + + P+ + Y+T+ E ++
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM ++ C + V ++ L+ + G D V+ + ++M+S + YT VI+
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G ++A + S + I+L + + AE ++++ +G P
Sbjct: 400 GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L KKG +E+ +E K+ + V PD + + L + G + A
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 348 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII--VERMQKDNVQMDA 393
LL + N G +T IY+S+ ++ G++ +I + ++ ++ DA
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ + QN L+E+M G + + Y ++N + G +D+ +L+ +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ V+Y + L S AE+ ++ + P+ ++++TL + K L E+A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M C + ++YS+++ G +E L + M++ N Y+ + +L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G K ++D + + D + N ++++ R + + A F+ +V+ G P
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDH 326
+T+ +L G +G ++ E + G++RK + H
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRH 640
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 135/328 (41%), Gaps = 4/328 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ +N ++ +MSE G Y +++ G L+ ++L +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
P+VV YN L S + AE+ E+ + D ++++ L + + L
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ L++M C + + Y+++++ + G DE + + K M S K N YT V
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L G + AE + + +P N L+ + +E A +++ G
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P ++ + G K G+ E+ LE + + P+ + ++ L +G ++
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVN--KGISPNTIIYSSIACALSREGRVNKV 550
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ +++ S + YN+++ + K
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCK 578
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 115/293 (39%), Gaps = 4/293 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N +LN G +D+ +L++L D+V+YN L E+ E+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P+ ++++TL + L E+ L +M + C + Y++++ G+ +
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
I +M S K N Y V+ L +++AE + E D NIL+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ ++ ++++ G P T+ + G+ K+G +++ + K K
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK- 423
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
P+ T L G AE L+ + G + +N+L+ K G
Sbjct: 424 -PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 137/311 (44%), Gaps = 14/311 (4%)
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQND 129
M + GF + YN +L+ + G++ + + +K SPDVVTYN L +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
+ A K F K PD ++Y+ L + + K + ++A L+ M + V Y+S
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 190 LLSLYTNMGYKDEV-LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
L++ G DE + I K S N Y+ +IS L + E + S+
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFS----PNVITYSTLISGLCR--ELRGVSEALKLFGSV 174
Query: 249 SGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
G +P VP NIL+ + +++ A ++ LV G++P T+ + G K G++
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
E L K + VPD A N L ++ +D AE LL + G I +N
Sbjct: 235 EDALLMLKDM--DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292
Query: 365 SLLRTYAKAGK 375
+L+ +AGK
Sbjct: 293 TLICGQCRAGK 303
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 146/363 (40%), Gaps = 77/363 (21%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +AL++ + + K EA+ ++++M + + YN ++N NG++D+ +
Sbjct: 78 PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML 137
Query: 103 LQE----------------------------------LKKNTSPDVVTYNLWLAACASQN 128
+ + LK+ P+V TYN+ + ++
Sbjct: 138 IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKED 197
Query: 129 DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYS 188
A + F L K ++PD I+Y+ K E A LK+M+++ C + V+++
Sbjct: 198 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 257
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
+ VI+ L K ++AE + E+
Sbjct: 258 A-----------------------------------VINGLCKEKRVDEAEVLLSGMEAK 282
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK---KGQM 305
+ + N L+ + + A + + ++ +G+KP T+ +L G K +G++
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYN 364
++ + F I R VPD +A + L + G +D A LL + G + + YN
Sbjct: 343 KEAITLFDAMIEKGR--VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYN 400
Query: 365 SLL 367
SL+
Sbjct: 401 SLI 403
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 9/230 (3%)
Query: 7 HGAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAE 63
HG + A +Y + +A + +++ +K PD S A+++ + K+ E
Sbjct: 212 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 271
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWL- 121
AE L+ M G + +N ++ G+ K +E LK+ P VVTYN+ +
Sbjct: 272 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 331
Query: 122 AACASQNDKETAEKAFL---ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
C ++ + E L ++K ++ PD ++YS L K + A L ME +
Sbjct: 332 GLCKARQEGRIKEAITLFDAMIEKGRV-PDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 390
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
C N Y+SL+S + DE L ++ M+ + Y +IS+
Sbjct: 391 GCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 159/386 (41%), Gaps = 21/386 (5%)
Query: 29 RARENFFENLPDKMRG----PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
RAR+ F E++ ++RG ++L+H+Y + EA + + KM E G + Y+
Sbjct: 320 RARQTF-ESM--RVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYS 376
Query: 85 HMLNLYISNGQ------LDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAF 137
++ + G +D+ +++E+++ + Y+ + ++E F
Sbjct: 377 IVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVF 436
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
LK+ P ISY L ++Y KM KA K ME + N YS L++ + +
Sbjct: 437 KRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKL 496
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+++ ++ K + Y +I + +G ++A ++ E + R
Sbjct: 497 KDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTF 556
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK-AI 316
++ + ++ A ++ + G P T+ L G ++K QMEK +E + A+
Sbjct: 557 MPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMAL 616
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
V PD T N GD A LRN G + Y +LL+ K+G+
Sbjct: 617 AGVS---PDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGR 673
Query: 376 M--PLIIVERMQKDNVQMDAETQKVL 399
M L + M N+ + +L
Sbjct: 674 MQSALAVTREMSAQNIPRNTFVYNIL 699
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 136/339 (40%), Gaps = 16/339 (4%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK---VPQM 102
D +++ Y + + +++ ECGF + Y ++N+Y G++ K V +M
Sbjct: 414 DIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKM 473
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
++ ++ TY++ + D A F ++ K + PD + Y+ + + M
Sbjct: 474 ME--SAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGM 531
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++A +KEM+K+ R + ++ + G L I+ M +
Sbjct: 532 GNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTF 591
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
++ LV+ + EKA I DE + D ++ Y A ++ +L
Sbjct: 592 NALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRN 651
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL----EE 338
+G++ T+E L K G+M+ L ++ + +P + + YN L
Sbjct: 652 EGLELDVFTYEALLKACCKSGRMQSALAVTREMSA---QNIPRNTFV---YNILIDGWAR 705
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+GD+ A L+ ++ G Y S + KAG M
Sbjct: 706 RGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDM 744
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 1/253 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++H + + + A + + M G + +N ++ + Q++K ++L E+
Sbjct: 559 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAG 618
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
SPD TY + A+ D A + F +L+ ++ D +Y L K + A
Sbjct: 619 VSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSAL 678
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+EM + +N Y+ L+ + G E + ++M + + YT I++
Sbjct: 679 AVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINAC 738
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G+ +A E E++ + + L+ + + E A + + G+KP
Sbjct: 739 CKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDK 798
Query: 290 TTWELLTWGYLKK 302
+ L L +
Sbjct: 799 AVYHCLMTSLLSR 811
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 101/260 (38%), Gaps = 15/260 (5%)
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
AF +KK P + + Y + +A T + M R + Y+SL+ Y
Sbjct: 293 AFERIKK----PARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYA 348
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG------EFEKAENIYDEWESIS 249
+E L +KM +M+ Y+ V+ K+G ++AE++ E E
Sbjct: 349 VGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEG 408
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ + ++ Y E + RL G P ++ L Y K G++ K L
Sbjct: 409 IDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKAL 468
Query: 310 ECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLR 368
E K ++ + + ++ + KL++ + +++ +YN++++
Sbjct: 469 EVSKMMESAGIKHNMKTYSMLINGFLKLKDW--TNAFTVFEDVIKDGLKPDVVLYNNIIK 526
Query: 369 TYAKAGKMPLII--VERMQK 386
+ G M I V+ MQK
Sbjct: 527 AFCGMGNMDRAIHMVKEMQK 546
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 155/373 (41%), Gaps = 15/373 (4%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEA 64
H + A R RVA A + + + + PD T + LL + + + +A
Sbjct: 166 HNPLIHALCERGRVADALVV--------LDGMLCRGCAPDVVTYNILLQAACKGRGYRQA 217
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAA 123
L++ M G + YN +++ G +D+ ++L L + P+ V YN L
Sbjct: 218 LELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 277
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
S A++ E+ + P+ + + + + + L +K L++M K C N
Sbjct: 278 FCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTAN 337
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y++++S G D L + M S K + Y V+ L +E AE +
Sbjct: 338 VVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 397
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ D N +++ + + + A + ++ KG P TT+ + G K G
Sbjct: 398 KMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAG 457
Query: 304 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEI 362
+ME+ LE + +R++T + NK + I+ ++ L+++G T +
Sbjct: 458 KMEQALELLNEMANKGFNTDKMYRVLTESLNK---EDKIEEVVQVVHKLQDSGISPQTVL 514
Query: 363 YNSLLRTYAKAGK 375
YN++L + GK
Sbjct: 515 YNTVLLGLCRNGK 527
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 18/353 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP---YNHMLNLYISNGQLDKVPQMLQE 105
+A LH + + A A L + L+ PL +N ML + G K + L+
Sbjct: 85 TASLHPLLSSLPPAPAFVLFADIFR---LRLPLSTTTFNIMLRHLCTAG---KPVRALEL 138
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDWISYSTLTSLYIKMEL 164
L++ SP+ VTYN +A ++ + + E++ + I PD +Y+T+ S + K+
Sbjct: 139 LRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGK 198
Query: 165 PEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
E A EM + N V Y++L+ Y + G + LR +M+ M A Y
Sbjct: 199 VEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYN 258
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+ +L G +A + +E D NIL+ Y + + A + +V K
Sbjct: 259 LFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGK 318
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDI 342
GI+ T+ L KG +++ F A VR+ + PD + A N GD+
Sbjct: 319 GIRATVVTYTSLIHALSMKGMVQETDRLFNDA---VRRGIRPDLFMYNALINSHCTGGDM 375
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMD 392
D A ++ + ++ YN+L+R G++ ++E M K +Q D
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R A+A AL E + +K PD T + L++ Y + K +A + E M G
Sbjct: 269 RAAEAHAL--------VEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGI 320
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ Y +++ G + + ++ + +++ PD+ YN + + + D + A +
Sbjct: 321 RATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFE 380
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
E++K +I PD ++Y+TL + ++A ++EM KR + + V+Y++L+S Y+
Sbjct: 381 IMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYS 440
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
G + +++ +MM Y +I L G+ AE++ E
Sbjct: 441 MKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEM 490
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 1/236 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ Y G L+ + E+ + S V TYNL++ + A E+
Sbjct: 222 YNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMG 281
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + PD +Y+ L + Y K +KA + M + R V Y+SL+ + G
Sbjct: 282 EKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQ 341
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E R++ + + + Y +I+S G+ ++A I E E T D N L+
Sbjct: 342 ETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLM 401
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
+L+ A + +GI+P ++ L GY KG ++ ++ + +G
Sbjct: 402 RGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMG 457
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 107/273 (39%), Gaps = 36/273 (13%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + +H+ ++AEA AL+E+M E G YN ++N Y G+ K +M + +
Sbjct: 256 TYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVM 315
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K VVTY + A + + + ++ F + + I PD Y+ L + +
Sbjct: 316 VGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDM 375
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + EMEK+ + V Y++L+
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMR--------------------------------- 402
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
L LG ++A + +E D N L++ Y + ++ A + ++ KG
Sbjct: 403 --GLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGF 460
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
P T+ + G GQ + K+ +G+
Sbjct: 461 NPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGN 493
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 1/184 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+H+ E + L G YN ++N + + G +D+ +++ E+
Sbjct: 326 TYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK +PD VTYN + + A E+ K I PD +SY+TL S Y
Sbjct: 386 EKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDI 445
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A EM + + Y++++ G + + K+M+ +D+ Y +
Sbjct: 446 KDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISL 505
Query: 226 ISSL 229
I L
Sbjct: 506 IEGL 509
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 148/334 (44%), Gaps = 6/334 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
TC+ L+ ++ + EA L+E M + GF + Y +++ + +NG LD+ ++ E
Sbjct: 70 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K S +VVTY+ + + A + + I PD ++Y+ L K
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L M ++ + V Y+ LLS G + +I + M+ K + Y +
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRV--PNILLAAYINRNQLEMAESFYNRLVTK 283
+ L G+ ++A +++ +P V N+L+ +L A + ++V K
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G T+ +L G LK G++++ +E +K+ + +VP+ + + + ++
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD--LGFVPNSFTYSILIDGFCKMRMLN 367
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
A+ L +R G + + YN+L+ + K G +
Sbjct: 368 IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 8/342 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQ 101
PD T + L+ ++ ++ A L+ M E G + YN +L+ G +D
Sbjct: 171 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 230
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL--KKTKIDPDWISYSTLTSLY 159
+ ++K DVVTYN + + + A K F + + ++P+ +++ L
Sbjct: 231 LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 290
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K KA ++M K+ N V Y+ LL G E + +WK+++ L N
Sbjct: 291 CKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS 350
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y+ +I K+ A+ ++ E + N L+A+ LE A+S +
Sbjct: 351 FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 410
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +P ++ + G LK G + V E K + + PD + N+L +
Sbjct: 411 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR--PDALTFSTLINRLSKL 468
Query: 340 GDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLII 380
G++D A+ L + +G +Y+SLL+ + G II
Sbjct: 469 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 510
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 84 NHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWL-AACASQNDKETAEKAFLELK 141
N +L NG + + +++E+ +K+ SPD+V+YN + C ++ KE A LE++
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKE-AVGLLLEME 60
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
P+ ++ +TL K ++A L+ M+K+ + V Y +L+S + N G D
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++ +M+ N Y+C++ L +LG++++A + + D L+
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ A N +V KG +P T+ +L G K+G V++ FK
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL---VIDAFK 229
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACAS 126
M K CG L + YN +L + G++ + ++ Q L P+ TY++ +
Sbjct: 306 MVKKGSCGNL---VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
A+ F E++ ++P Y+TL + K E+A + +EM C + ++
Sbjct: 363 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 422
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
+++++ G V + KM+ + + + ++ +I+ L KLGE ++A++ +
Sbjct: 423 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 482
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+ T D V + LL ++ + +++ KG
Sbjct: 483 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 154/388 (39%), Gaps = 6/388 (1%)
Query: 29 RARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
R EN+ +P +G LL + V +AE + KM + F N +L
Sbjct: 229 RMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDLEFPITAFACNQLLL 288
Query: 89 LYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
LY + +L K+N P TY + + ND E+ +K I+ D
Sbjct: 289 LYKRTDKRKVADILLLMEKENVKPSRFTYRILIDTKGLSNDITGMEQVVDTMKAEGIELD 348
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+ S L YI L +KA LKEME+ +R LL LY + +DEV R+W+
Sbjct: 349 VSTLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCRILLPLYGELQMEDEVRRLWE 408
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI-NR 267
S + E I + KL ++AE I+D R + +L Y +
Sbjct: 409 ICGS---NPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLSARHYSTMLNVYREDS 465
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
L + ++ G + T + + Y++ G++EK K + +K P
Sbjct: 466 KMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVEKADSFLVKTVLQYKK-KPMFT 524
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQK 386
++ +GD+ AE + +R G+V + +L++ Y A + ERM+
Sbjct: 525 TYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKA 584
Query: 387 DNVQMDAETQKVLKITSEMPVSEVSSIF 414
D+V + L + + EVS +
Sbjct: 585 DSVFPNKALAGKLAQVDSLKMREVSDLL 612
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 9/275 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ P TY L L A + AE E+++ I P+ Y+ +K
Sbjct: 4 LEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCT 63
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA + M++ CR N ++ ++++Y ++++ +M S+ K N YT +
Sbjct: 64 EKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTAL 123
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+++ + G EKAE +++E + D N L+ AY + A ++ + G
Sbjct: 124 VNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGC 183
Query: 286 KPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+P ++ +L Y + G E V E K+ + + H L+ AA+ + G+
Sbjct: 184 EPDRASYNILVDAYGRAGLHEDAEAVFEELKQR--GMSPTMKSHMLLLAAHAR---SGNA 238
Query: 343 DGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
E ++ L +G T N++L YA+AG++
Sbjct: 239 TRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 273
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 122/330 (36%), Gaps = 38/330 (11%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y AE ++ +M E G YN L+ + +K ++ Q
Sbjct: 13 DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 72
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K+ + T+ L + ++ K F E+K P+ +Y+ L + + + L
Sbjct: 73 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 132
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +EM++ + AY++L+ Y+ G I+ M + + + A Y
Sbjct: 133 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNI 192
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E AE +++E L +G
Sbjct: 193 LVDAYGRAGLHEDAEAVFEE-----------------------------------LKQRG 217
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P + LL + + G + E + S PD + A N G +D
Sbjct: 218 MSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS--GLTPDTFALNAMLNAYARAGRLDD 275
Query: 345 AEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
E L + G YN + Y +AG
Sbjct: 276 MERLFAAMERRGDADVGTYNVAVNAYGRAG 305
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 2/181 (1%)
Query: 32 ENFFENLPDKMRGPDTCSA--LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE L + P S LL ++ ++ + E +M ++ + G N MLN
Sbjct: 207 EAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNA 266
Query: 90 YISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
Y G+LD + ++ +++ DV TYN+ + A E AF + + D
Sbjct: 267 YARAGRLDDMERLFAAMERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADV 326
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++++ Y + + + ++EM C + LL+ ++ ++V I +
Sbjct: 327 VTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRS 386
Query: 210 M 210
M
Sbjct: 387 M 387
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 155/344 (45%), Gaps = 24/344 (6%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + ++S++A L+E+M + G + +N ++ GQL++
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408
Query: 103 LQEL-KKNTSPDVVTYNLWLAA-CASQNDKETAEKAFL---ELKKTKIDPDWISYSTLTS 157
L+ + ++ +PDV+TYN + A C ++N KAF+ E+ ++ + D + +TL
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARN----VAKAFVLMDEMVRSGLKMDTFTLNTLLY 464
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K + E+A L+ +R + V+Y ++++ Y + L +W +M
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y +I L +G+ +A + +E D NI++ AY LE A F+
Sbjct: 525 SIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFH 584
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA-AYNKL 336
N+++ KP T L G G++EK ++ F+ W + + YN L
Sbjct: 585 NKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFE-------SWAEKGKKVDVITYNTL 637
Query: 337 EE----QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
+ GD+D A H + G YN +L ++AG+
Sbjct: 638 IQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 3/267 (1%)
Query: 44 GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
PD T + L+ +Y + + A+A LM++M G N +L + ++ +
Sbjct: 418 APDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 477
Query: 102 MLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+L+ ++ PD V+Y +AA +N E A + E+ K K+ P +Y+TL
Sbjct: 478 LLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLC 537
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ +A L E+ K+ + Y+ ++ Y G ++ + KM+ + K +
Sbjct: 538 TIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVV 597
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+++ L G+ EKA +++ W D N L+ A ++ A F+ +
Sbjct: 598 TCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM 657
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEK 307
+G++P T+ ++ + G+ E+
Sbjct: 658 EARGLQPDAFTYNVVLSALSEAGRSEE 684
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+ T+NL + S+ A ++ + PD ++Y+TL + + + +A T
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L M+K R Y++L+S Y +G+ + + + M + + + Y + + L +
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327
Query: 232 LGEFEKAENIYDEWESIS-GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
G+ ++A + DE E +S + D N L+ A + A + + KG+K
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387
Query: 291 TWELLTWGYLKKGQMEKVL 309
T ++ G ++GQ+E+ L
Sbjct: 388 THNIVVKGLCREGQLEEAL 406
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 117/296 (39%), Gaps = 5/296 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N +++ + S G L L ++ SPDVVTYN L A + A +K
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K I P +Y+TL S Y ++ ++A ++ M + Y+ L + G D
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332
Query: 202 EVLRIWKKMMSLFAKMND-AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
E ++ +M L D Y ++ + K A N+ +E NI+
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ QLE A + +G+ P T+ L Y K + K + + S
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
K + L T YN +E+ + AE LL + G V E+ Y +++ Y K K
Sbjct: 453 K-MDTFTLNTLLYNLCKEK-RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENK 506
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 165/452 (36%), Gaps = 81/452 (17%)
Query: 23 AQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
A AL T + F PD + T + LL ++ + EA L+ +M + G
Sbjct: 227 ADALSTLSTMQGFGLSPDVV----TYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRAT 282
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ Y G + + +++ + PD+ TYN+ A + A K E++
Sbjct: 283 YNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME 342
Query: 142 KTKI-DPDWISYSTLTSLYIKMELPEKAATTLKEME---------------KRTCRKNR- 184
I PD ++Y+TL K + A L+EM K CR+ +
Sbjct: 343 HLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQL 402
Query: 185 -------------------VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ Y++L+ Y + + +M+ KM+ +
Sbjct: 403 EEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTL 462
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE-------------M 272
+ +L K +E+AE + D ++AAY N+ E +
Sbjct: 463 LYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKL 522
Query: 273 AESFY----------------------NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
S Y N L+ KG+ P TT+ ++ Y K+G +EK +
Sbjct: 523 TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQ 582
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 369
K + + K PD N L G ++ A L + G V YN+L++
Sbjct: 583 FHNKMLENYFK--PDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQA 640
Query: 370 YAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
K G + L M+ +Q DA T V+
Sbjct: 641 LCKDGDVDTALHFFADMEARGLQPDAFTYNVV 672
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL++ + K+ EAE L+ + GF+ + Y ++ Y + + + E+
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ +P + TYN + + A EL K + PD +Y+ + Y K
Sbjct: 518 SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDL 577
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
EKA +M + + + V ++L++ G ++ +++++ K++ Y +
Sbjct: 578 EKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTL 637
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I +L K G+ + A + + + E+ D N++L+A + E A++ ++L G
Sbjct: 638 IQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 138/355 (38%), Gaps = 25/355 (7%)
Query: 4 RRPHGAQVRAQSYRQR----------------VAQAQALQTRARENFFENLPDKMRGPD- 46
R PH A S+R+R +A++ + +A + F +L P+
Sbjct: 151 RLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNH 210
Query: 47 -TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + L+H++ A+A + + M G + YN +L + G L + +L
Sbjct: 211 YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLAR 270
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+KK +P TYN ++A A + A + +PD +Y+ L + +
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330
Query: 165 PEKAATTLKEMEKRT-CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++A EME + + V Y++L+ + L + ++M K + +
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
V+ L + G+ E+A D N L+ AY + A + +V
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNK 335
G+K T L + K+ + E+ E + R +VPD + + AAY K
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP--PQRGFVPDEVSYGTVMAAYFK 503
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + ++H+Y + +A KM E F + N ++N +G+L+K ++
Sbjct: 559 PDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKL 618
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ +K DV+TYN + A D +TA F +++ + PD +Y+ + S +
Sbjct: 619 FESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 678
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAY 187
E+A L ++++ R +Y
Sbjct: 679 AGRSEEAQNMLHKLDESGKLSERFSY 704
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 121/310 (39%), Gaps = 16/310 (5%)
Query: 101 QMLQELKK--NTSPDVVTYNLWLAACA--SQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
Q+L ++ + P + N L+A A + + F L ++ P+ +++ L
Sbjct: 158 QLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLV 217
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ A +TL M+ + V Y++LL + G E + +M
Sbjct: 218 HTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIA 277
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
A Y ++S+ +LG ++A N+ + + D N+L A +++ A
Sbjct: 278 PTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 337
Query: 277 YNRLVTKGI-KPCYTTWELLT---WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
+ + I P T+ L + Y + +LE + V+ + H ++
Sbjct: 338 KDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDK--GVKSSLVTHNIVVKG 395
Query: 333 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNV 389
L +G ++ A L + G I YN+L+ Y KA + ++++ M + +
Sbjct: 396 ---LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452
Query: 390 QMDAETQKVL 399
+MD T L
Sbjct: 453 KMDTFTLNTL 462
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 144/333 (43%), Gaps = 33/333 (9%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWL 121
E ++ K++ C F +C G+ +K +++E+ K PD TY+ +
Sbjct: 80 EMGVVLNKVNVCNFTRC----------LCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVI 129
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + E A + F E+K+ I PD +Y+TL + K+ L E+A EM++ C
Sbjct: 130 GYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N V Y++L+ Y I++ M+S N YT +I K GE EKA I
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249
Query: 242 Y-------------DEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTK 283
Y D + I + + + PN+ L+ ++++ A + +
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDS-ELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLE 308
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G +P ++ L G+ K G++++ E F K +G P+ ++ +KL + +D
Sbjct: 309 GCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLG--HGCSPNVYTYSSLIDKLFKDKRLD 366
Query: 344 GAEHLLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
A +L L N+ + IY ++ K GK
Sbjct: 367 LALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 152/338 (44%), Gaps = 25/338 (7%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYN 118
K +A ++ +M GF+ Y+ ++ + +++K Q+ QE+K+N +PDV TY
Sbjct: 102 KFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYT 161
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
L E A F E+++ P+ ++Y+ L Y+K +A + M
Sbjct: 162 TLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN 221
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM---------MSLFAKMNDAE-------- 221
C N V Y++L+ + G ++ +I+ +M + ++ ++ D+E
Sbjct: 222 GCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVT 281
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPR--VPNILLAAYINRNQLEMAESFYNR 279
Y ++ L K + ++A ++ E S+ G +P + + L+ + +L+ A+ + +
Sbjct: 282 YGALVDGLCKAHKVKEARDLL-ETMSLEGC-EPNQIIYDALIDGFCKVGKLDEAQEVFTK 339
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
++ G P T+ L K +++ L+ K + + P+ + T + L +
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLEN--SCAPNVVIYTEMVDGLCKV 397
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
G D A L++ + G + + Y +++ + KAG++
Sbjct: 398 GKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRV 435
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 119/280 (42%), Gaps = 5/280 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+F + +++ P+ T AL+ + K EA L+E MS G + Y+ +++ +
Sbjct: 266 YFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFC 325
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G+LD+ ++ + L SP+V TY+ + + A K ++ + P+ +
Sbjct: 326 KVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVV 385
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+ + K+ ++A + ME++ C N V Y++++ + G D L + + M
Sbjct: 386 IYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM 445
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S N Y +I+ G + A + +E + + ++ + ++
Sbjct: 446 TSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEF 503
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ L G P ++LL ++K G++E LE
Sbjct: 504 VASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALE 543
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 8/255 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL------TSLY 159
+ + P + +N + A D A K ++ P ++ Y+ L T
Sbjct: 3 ITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDL 62
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
ME+ A EM + N+V + +G ++ + ++MMS +
Sbjct: 63 PSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDS 122
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
+ Y+ VI L + EKA ++ E + T D LL + +E A ++++
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDE 182
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ G P T+ L YLK ++ + E F+ + + VP+ TA + +
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN--GCVPNIVTYTALIDGHCKA 240
Query: 340 GDIDGAEHLLVTLRN 354
G+ + A + ++N
Sbjct: 241 GETEKACQIYARMKN 255
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 8/297 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+++ Y + + EAE L +M E G + YN +++ Y Q + V +L E+
Sbjct: 384 IMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLG 443
Query: 110 TSPDVVTYNLWLAACASQND-KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P+ +YN ++A Q E AE AFL +KK I SY++L Y EKA
Sbjct: 444 FQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKA 503
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+M++ + + Y++LL ++ G ++++ WK M + V+
Sbjct: 504 HIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDG 563
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L K G F +A ++ E+ I NIL+ AY Q + T +KP
Sbjct: 564 LAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPD 623
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ L + Y + + K+ + + + VPD + +Y KL D+ A
Sbjct: 624 SVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQ--VPDAK----SYRKLLNTLDVKSA 674
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 15/253 (5%)
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E++K I + Y+T+ ++Y K E+A EM+++ + +V Y+ L+ Y+
Sbjct: 368 EMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRL 427
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF-EKAENIYDEWESISGTGDPRVP 257
+ V + +M L + N Y C+IS+ + + EKAE+ + +
Sbjct: 428 QPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSY 487
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK---- 313
L+ AY Q E A Y + +G+KP T+ L + + G EK++E +K
Sbjct: 488 TSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTD 547
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ +G R V H ++ + L + G A ++ G T + YN L+ YAK
Sbjct: 548 EKVGCTR--VTFHMVL----DGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAK 601
Query: 373 AG---KMPLIIVE 382
G K+P ++ E
Sbjct: 602 GGQHYKLPQLLKE 614
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 7/266 (2%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA-TT 171
+ V YN ++ A + A K F ++K + PD ++ S + + + + K +
Sbjct: 271 EAVLYNAAMSGVAYCGRYDDAWKIFESMEKNNVQPDHVTSSIMLLVMKRRKASAKDSWKF 330
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ M ++ + + +SL+ ++ + G K E L +M N + Y +++ K
Sbjct: 331 FQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQSEMEKRGIPSNTSIYNTIMNVYCK 390
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+ E+AE ++ E + NIL+ AY R Q E+ ES + G +P +
Sbjct: 391 CSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPNARS 450
Query: 292 WELLTWGYLKKGQM-EKVLECF-KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ L Y ++ +M EK + F + G ++ + + AY G + A
Sbjct: 451 YNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAY---AVSGQYEKAHIAY 507
Query: 350 VTLRNAG-HVSTEIYNSLLRTYAKAG 374
+ ++ G S E Y +LL + +AG
Sbjct: 508 LDMKREGLKPSLETYTALLDIFRRAG 533
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P TY L L A + E AE F E++K + P I Y+ +K P++A
Sbjct: 181 PTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEI 240
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ M++ C+ + Y+ L++L+ L+++ +M S K N YT ++++ +
Sbjct: 241 FQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAR 300
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G EKAE I+++ + D N L+ AY A ++ + G +P +
Sbjct: 301 EGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRAS 360
Query: 292 WELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ ++ Y + G E F+ K +G + + H L+ +AY+K GD+ E ++
Sbjct: 361 YNIMVDAYGRGGLHEDAQAVFEEMKRLG-ITPTMKSHMLLLSAYSK---AGDVAKCEDIV 416
Query: 350 VTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
L +G T + NS+L Y + G+ + ++ M+ D T +L
Sbjct: 417 NELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNIL 469
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 169/378 (44%), Gaps = 16/378 (4%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + LL +Y + +AEA+ +M + G + YN ++ + G + ++ Q
Sbjct: 184 DTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQR 243
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ P TY L + + A K F E++ K P+ +Y+ L + + + L
Sbjct: 244 MKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGL 303
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +++++ + AY++L+ Y+ G+ I+ M + + + A Y
Sbjct: 304 CEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 363
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G E A+ +++E + + T + +LL+AY + E N L G
Sbjct: 364 MVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESG 423
Query: 285 IKP-CYTTWELLT-WGYLKK-GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
++P + +L +G L + G+ME+VL + G + + ++ Y + G
Sbjct: 424 LEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMES--GPYATDISTYNILINIYGR---AGF 478
Query: 342 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQK 397
+ E L +L A ++ ++ + S L Y+ K L I E M D T K
Sbjct: 479 FEKMEGLFQSL-AAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAK 537
Query: 398 VL--KITSEMPVSEVSSI 413
VL +SE + +V+++
Sbjct: 538 VLLSSCSSEDQIEQVTTV 555
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 3/243 (1%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E FE L + PD + AL+ +Y + A + M G YN M++
Sbjct: 308 EEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 367
Query: 90 YISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G + + +E+K+ +P + ++ L L+A + D E EL ++ ++PD
Sbjct: 368 YGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPD 427
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++ +LY ++ K L ME + Y+ L+++Y G+ +++ +++
Sbjct: 428 TFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQ 487
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+ + K + +T + + + + K I++E D R +LL++ + +
Sbjct: 488 SLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSED 547
Query: 269 QLE 271
Q+E
Sbjct: 548 QIE 550
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 32 ENFFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ L + PDT +++L+ Y + + + E ++ M + YN ++N+
Sbjct: 413 EDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINI 472
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y G +K+ + Q L KN PDVVT+ L A + + + F E+ PD
Sbjct: 473 YGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPD 532
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEK 177
+ L S + E+ T ++ M K
Sbjct: 533 GRTAKVLLSSCSSEDQIEQVTTVIRTMHK 561
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 1/273 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + K +A L+ KM E + YN ++++ G D ++L L
Sbjct: 426 TYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLL 485
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N PD TY++++ E A F LK+ I + + Y+ L + K
Sbjct: 486 KENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKI 545
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + L+ M C N Y+SL+ G E L + + M + K A YT +
Sbjct: 546 DEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTIL 605
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I +++ G+F+ A ++++ S D + Y ++ AE R++ G+
Sbjct: 606 IEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGV 665
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
P T+ LL Y + G K+ + +
Sbjct: 666 MPDSLTYTLLISAYERLGLAYDAFNVLKRMLDA 698
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 123/294 (41%), Gaps = 4/294 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +L + +D++ ++ E L P++ T N + A + + A ++
Sbjct: 182 YNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIF 241
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + PD +Y++L Y + A M + CR+N V+Y++++ G D
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E + ++KKM YT +I +L + ++++E S + +++
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMV 361
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
A +L+ + N ++ KG+ P T+ L GY ++G++E LE +
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL--GLMESNN 419
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
P+ R ++ + A LL + + + + YNSL+ KAG
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 140/337 (41%), Gaps = 11/337 (3%)
Query: 47 TCSALLHSYV-------QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKV 99
+C +H+Y + +K E+ ++ +M E G + + YN ++ Y G+++
Sbjct: 349 SCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAA 408
Query: 100 PQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
++L ++ N P+ TYN + + + A ++ ++K+ P ++Y++L +
Sbjct: 409 LEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHV 468
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
K + A L +++ ++ YS + +E ++ + K N
Sbjct: 469 QCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN 528
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ YT +I K G+ ++A ++ + S + N L+ +++ S
Sbjct: 529 EVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVE 588
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+ G+KP T+ +L L++G + F + + K PD TA +
Sbjct: 589 NMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK--PDVYTYTAFIHTYCT 646
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
G++ AE ++ + AG + + Y L+ Y + G
Sbjct: 647 SGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLG 683
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 118/283 (41%), Gaps = 3/283 (1%)
Query: 35 FENLPDK--MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F +P+K R + + ++H + + E +L +KM E Y +++
Sbjct: 272 FNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFG 331
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
N + + + E++ ++ P+V TY + + A + + + + E+ + + P ++
Sbjct: 332 NDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVT 391
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L Y + E A L ME CR N Y+ L+ ++ + + + + KM+
Sbjct: 392 YNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKML 451
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
+ Y +I K G F+ A + D + D ++ + ++E
Sbjct: 452 ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRME 511
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
A +N L KGIK + L G+ K G++++ + ++
Sbjct: 512 EACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLER 554
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 142/316 (44%), Gaps = 4/316 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWL 121
+A +++ M + G + Y +++ + G+LDK ++ +++ ++ PD+VTY +
Sbjct: 280 DAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLM 339
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
+ + D ET ++ + E++ PD ++Y+ L K ++A L M R
Sbjct: 340 SKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIV 399
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N Y++L+S N+ DE L ++ M SL Y I KLG+ EKA +
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDT 459
Query: 242 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+++ + N L + ++ A+ +N + G+ P T+ ++ Y K
Sbjct: 460 FEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSK 519
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
GQ++K + + + PD ++ + + L + G +D A + L++ T
Sbjct: 520 AGQIDKATKLLTEMLS--EGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577
Query: 362 I-YNSLLRTYAKAGKM 376
+ YN L+ K GK+
Sbjct: 578 VTYNILITGLGKEGKL 593
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
T P +YN + N E A K F+E+K P+ +Y+ L + K + ++
Sbjct: 783 GTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDEL 842
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
EM R C+ N + ++ ++S ++ L ++ +++S Y +I
Sbjct: 843 FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L+K G E+A I++E + + NIL+ + + +A + R++ +GI+P
Sbjct: 903 LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
++ +L G+++ + F++ + PD N L + ++ A L
Sbjct: 963 LKSYTILVECLFMTGRVDDAVHYFEEL--KLTGLDPDTVSYNLMINGLGKSRRLEEALSL 1020
Query: 349 LVTLRNAGHVSTEI--YNSLLRTYAKAG 374
++N G +S E+ YN+L+ + AG
Sbjct: 1021 FSEMKNRG-ISPELYTYNALILHFGNAG 1047
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 119/271 (43%), Gaps = 1/271 (0%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P++ + L+ + + A L +M G YN +L+ + + ++D++ ++
Sbjct: 788 PESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYN 847
Query: 105 E-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E L + P+++T+N+ ++A N A + E+ P +Y L +K
Sbjct: 848 EMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAG 907
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
E+A +EM C+ N Y+ L++ + G + ++K+M+ + + YT
Sbjct: 908 RSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYT 967
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
++ L G + A + ++E + D N+++ +LE A S ++ + +
Sbjct: 968 ILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNR 1027
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
GI P T+ L + G +++ + F++
Sbjct: 1028 GISPELYTYNALILHFGNAGMVDQAGKMFEE 1058
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-L 106
C+A L+S + + EA+ + + CG + YN M+ Y GQ+DK ++L E L
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ PD++ N + + A + F LK K+ P ++Y+ L + K
Sbjct: 535 SEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLL 594
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA M++ C N V +++LL D L+++ +M + + Y +I
Sbjct: 595 KALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654
Query: 227 SSLVKLG 233
L+K G
Sbjct: 655 YGLIKEG 661
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y ++ +G++D+ ML ++ + P++ TYN ++ + + A + F ++
Sbjct: 370 YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P SY Y K+ PEKA T ++M+KR + A ++ L MG
Sbjct: 430 SLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIR 489
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E I+ + + + Y ++ K G+ +KA + E S D V N L+
Sbjct: 490 EAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLI 549
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+++ A + RL + P T+ +L G K+G++ K L+ F
Sbjct: 550 DTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 35 FENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE +PD P+ + L++ + + A L ++M + G Y ++
Sbjct: 916 FEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFM 975
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D +ELK PD V+YNL + E A F E+K I P+ +
Sbjct: 976 TGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYT 1035
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+ L + + ++A +E++ N Y++L+ ++ G KD ++KKMM
Sbjct: 1036 YNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMM 1095
Query: 212 SLFAKMNDAEY 222
+ N +
Sbjct: 1096 IVGCSPNAGTF 1106
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 138/356 (38%), Gaps = 6/356 (1%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LP+ + P+TC+ +L + + + + + M + + P Y + G +
Sbjct: 115 LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIR 174
Query: 98 KVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ P L ++++ + +YN + + A K + + + P +YS L
Sbjct: 175 QAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALM 234
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
+ L+EME R N Y+ + + G D+ I K M
Sbjct: 235 VALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCG 294
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ YT +I +L G+ +KA+ +Y + + S D L++ + N LE + F
Sbjct: 295 PDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRF 354
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
++ + G P T+ +L K G++++ + + VR VP+ + L
Sbjct: 355 WSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLD--VMRVRGIVPNLHTYNTLISGL 412
Query: 337 EEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLIIVERMQKDNV 389
+D A L + + G T Y + Y K G + L E+M+K +
Sbjct: 413 LNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 113/269 (42%), Gaps = 1/269 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL ++ ++K+ E L +M G + +N +++ + + ++K + E+
Sbjct: 825 TYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI 884
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ SP TY + E A K F E+ + P+ Y+ L + + K
Sbjct: 885 ISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNV 944
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A K M K R + +Y+ L+ G D+ + ++++ + Y +
Sbjct: 945 NIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLM 1004
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ L K E+A +++ E ++ + + N L+ + N ++ A + L G+
Sbjct: 1005 INGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGL 1064
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+P T+ L G+ K G ++ FKK
Sbjct: 1065 EPNVFTYNALIRGHSKSGNKDRAFSVFKK 1093
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 137/361 (37%), Gaps = 13/361 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQML 103
T +ALL +N A + +M+ + C L YN ++ I G+
Sbjct: 614 TFNALLDCLCKNDAVDLALKMFCRMT---IMNCSPDVLTYNTIIYGLIKEGRAGYAFWFY 670
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL--KKTKIDPDWISYSTLTSLYIK 161
++KK SPD VT L E A K +E + + + + + I+
Sbjct: 671 HQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIE 730
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+ E + + C+ + + + L D K SL
Sbjct: 731 AEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPES 790
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y C++ L+ E A ++ E ++ + N+LL A+ +++ YN ++
Sbjct: 791 YNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEML 850
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G KP T ++ +K + K L+ + + I + P L + G
Sbjct: 851 CRGCKPNIITHNIIISALVKSNSINKALDLYYEIISG--DFSPTPCTYGPLIGGLLKAGR 908
Query: 342 IDGAEHLLVTLRN-AGHVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKV 398
+ A + + + + IYN L+ + KAG + + + +RM K+ ++ D ++ +
Sbjct: 909 SEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968
Query: 399 L 399
L
Sbjct: 969 L 969
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 18/287 (6%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEAL--MEKMSECGFLKCPLPYNHMLNLYI 91
F N+ P S +L K +AL EKM + G + N L
Sbjct: 424 LFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLA 483
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++ + + ++ SPD VTYN+ + + + A K E+ +PD I
Sbjct: 484 EMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDII 543
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++L K ++A ++ V Y+ L+ T +G + ++L K
Sbjct: 544 VVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILI---TGLGKEGKLL----KA 596
Query: 211 MSLFAKM-------NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ LF M N + ++ L K + A ++ ++ + D N ++
Sbjct: 597 LDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYG 656
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
I + A FY+++ K + P + T L G +K G++E ++
Sbjct: 657 LIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIK 702
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN M+N + +L++ + E+K + SP++ TYN + + + A K F EL+
Sbjct: 1001 YNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
++P+ +Y+ L + K ++A + K+M C N ++ L
Sbjct: 1061 FMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T S L+ +N K EA E+M S+ L L YN ++N + G++D+ +L+
Sbjct: 228 TYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEF 287
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K N SP+V Y++ + + + A++ F E+K + PD ISY+TL + +
Sbjct: 288 MKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGR 347
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A L++M+ + CR + V ++ +L G DE L + +K+ +N Y
Sbjct: 348 VDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRI 407
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
V++ L + GE KA + + N LL N ++ A L+ G
Sbjct: 408 VLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMG 467
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
KP + +W L ++ +M V E
Sbjct: 468 FKPEHESWFTLVDLICRERKMLPVFE 493
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 10/236 (4%)
Query: 147 PDWISYSTLTSLYIKMELPEKAATTL-KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P + ST +L ++ + + A L K R N ++ L+ + G
Sbjct: 152 PSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFE 211
Query: 206 IWKKMMSLFAKM-NDAEYTCVISSLVKLGEFEKAENIYDEWESISGT-GDPRVPNILLAA 263
+ K+M S N Y+ +I L + G+ ++A ++E S D NIL+
Sbjct: 212 VVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILING 271
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRK 321
+ R +++ A + + + G P + +L GY K+G++++ E F K++G
Sbjct: 272 FCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLG---- 327
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
PD T N L G +D A LL +++ T +N +L + G+
Sbjct: 328 MKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRF 383
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 21 AQAQALQTRARENFFENLPDKMR---GPDTCSALLHSYVQNKKSAEAEALMEKMSE--CG 75
A ++AL A F +LP + G + +ALL ++V+ ++ +EA+A +S CG
Sbjct: 133 AFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACG 192
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ +P++ TYN+ L + ++ D + A
Sbjct: 193 --------------------------------RRLAPNLQTYNIILRSLCARGDVDRAVS 220
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F L++ + PD ++YSTL S +K + + A L EM + + V Y++LLS
Sbjct: 221 LFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEMPDYGVQADAVCYNALLSGCF 280
Query: 196 NMGYKDEVLRIWKKMM-SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G ++ +++W++++ A N A Y ++ L KLG F++A ++ + + D
Sbjct: 281 KTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDT 340
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
IL+ ++ A Y+ +V G+ + L G+ K G+
Sbjct: 341 VTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVGR 390
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 102/252 (40%), Gaps = 9/252 (3%)
Query: 131 ETAEKAFLELKKT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK----NRV 185
+ A AF +L +P S++ L +++ +A + C + N
Sbjct: 141 DAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQ 200
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y+ +L G D + ++ + + Y+ ++S LVK + + A ++ DE
Sbjct: 201 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEM 260
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV-TKGIKPCYTTWELLTWGYLKKGQ 304
D N LL+ E A + +LV G P T++++ G K G+
Sbjct: 261 PDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGR 320
Query: 305 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIY 363
++ E + + + + + PD + L GD+D A + + AG V +Y
Sbjct: 321 FKEAGEVWSRMVANNHQ--PDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVY 378
Query: 364 NSLLRTYAKAGK 375
NSL++ + K G+
Sbjct: 379 NSLIKGFCKVGR 390
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F +L + PD T S L+ V++ + A L+++M + G + YN +L+
Sbjct: 220 SLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEMPDYGVQADAVCYNALLSGC 279
Query: 91 ISNGQLDKVPQMLQELKKN--TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
G +K ++ ++L ++ SP++ TY + L + A + + + PD
Sbjct: 280 FKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPD 339
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
++Y L + + AA +M K + Y+SL+ + +G E + W
Sbjct: 340 TVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFW 398
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 8/297 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+++ Y + + EAE L +M E G + YN +++ Y Q + V +L E+
Sbjct: 384 IMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLG 443
Query: 110 TSPDVVTYNLWLAACASQND-KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
P+ +YN ++A Q E AE AFL +KK I SY++L Y EKA
Sbjct: 444 FQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKA 503
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+M++ + + Y++LL ++ G ++++ WK M + V+
Sbjct: 504 HIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDG 563
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L K G F +A ++ E+ I NIL+ AY Q + T +KP
Sbjct: 564 LAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPD 623
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
T+ L + Y + + K+ + + + VPD + +Y KL D+ A
Sbjct: 624 SVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQ--VPDAK----SYRKLLNTLDVKSA 674
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 15/253 (5%)
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+ K I + Y+T+ ++Y K E+A EM+++ + +V Y+ L+ Y+
Sbjct: 368 EMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRL 427
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF-EKAENIYDEWESISGTGDPRVP 257
+ V + +M L + N Y C+IS+ + + EKAE+ + +
Sbjct: 428 QPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSY 487
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK---- 313
L+ AY Q E A Y + +G+KP T+ L + + G EK++E +K
Sbjct: 488 TSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTD 547
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ +G R V H ++ + L + G A ++ G T + YN L+ YAK
Sbjct: 548 EKVGCTR--VTFHMVL----DGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAK 601
Query: 373 AG---KMPLIIVE 382
G K+P ++ E
Sbjct: 602 GGQHYKLPQLLKE 614
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 7/266 (2%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA-TT 171
+ V YN ++ A + A K F ++K + PD ++ S + + + + K +
Sbjct: 271 EAVLYNAAMSGVAYCGRYDDAWKIFESMEKNNVQPDHVTSSIMLLVMKRRKASAKDSWKF 330
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ M ++ + + +SL+ ++ + G K E L +M N + Y +++ K
Sbjct: 331 FQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQSEMGKRGIPSNTSIYNTIMNVYCK 390
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+ E+AE ++ E + NIL+ AY R Q E+ ES + G +P +
Sbjct: 391 CSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPNARS 450
Query: 292 WELLTWGYLKKGQM-EKVLECF-KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ L Y ++ +M EK + F + G ++ + + AY G + A
Sbjct: 451 YNCLISAYGRQKKMSEKAEDAFLRMKKGGIKATSSSYTSLICAY---AVSGQYEKAHIAY 507
Query: 350 VTLRNAG-HVSTEIYNSLLRTYAKAG 374
+ ++ G S E Y +LL + +AG
Sbjct: 508 LDMKREGLKPSLETYTALLDIFRRAG 533
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 154/372 (41%), Gaps = 8/372 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F ++ +K P+ T +AL+ + A L +MS G + YN ++N+ +
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
N ++ +L + +N SP++VTYN + D + A + + + +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+T+ Y A L M C+ + +Y+ L+ + + + ++ +M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ N+ YT +I K + + A ++ + + + + N+L+ +N
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
AE ++ +GI P T+ + G K G LE F K I + +P+ +
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE--QGCLPNLLTYS 639
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
+ L ++G ++ AE+L L G + EI Y ++ Y +GK+ + RM K
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 388 NVQMDAETQKVL 399
Q T VL
Sbjct: 700 GCQPTLWTYGVL 711
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN----HMLNLYISNGQLDKVPQMLQEL 106
L+ S + A + ++ +S+ G Y+ H+ L ++ +D+ +ML E
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE- 209
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
P+++ YN + A + AE ++ ++++ PD +Y+++ + + +
Sbjct: 210 --GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD 267
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV- 225
A +M K C N V YS+L++ + G +E + ++M + + +TC
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM--ILHGILPTAHTCTG 325
Query: 226 -ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I +L +G +E A ++ + ++ + L++ L++A ++R+ G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 285 IKPCYTTWELL 295
+ P T+ L
Sbjct: 386 VFPNTVTYNAL 396
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 134/352 (38%), Gaps = 28/352 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H + + AE L + M E G + Y M++ NG +M ++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+++TY+ + A + E AE F EL++ + PD I+Y + YI
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTN--------------------MGY----KD 201
E A L M K C+ Y L+ N GY +D
Sbjct: 687 EHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQD 746
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
V + K+ L ++ ++S+L G + +A + S D N LL
Sbjct: 747 AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL 806
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ + +++A + + T+G + ++ L + + ++ F+ + +R
Sbjct: 807 CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENML--MRT 864
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
W PD + + L G D L + ++ S IY L R +K
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 130/361 (36%), Gaps = 39/361 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+A++++ ++ A+AE +M+K+ E Y M+ + LD Q+ ++ K
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ VTY+ + A E+ I P + + M E
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +M+ + C N Y++L+S G + ++ +M N Y +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Query: 228 SLVK-------------LGEFEKAENIYDEWESISG---TGDPR---------------- 255
LV+ +G + NI E I G GDP+
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458
Query: 256 ---VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
N ++ Y + A + + G KP ++ L G+ K +ME F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYA 371
+ + P+ TA + + +D A LL ++ +G + + YN L+
Sbjct: 519 NEMVDD--GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 372 K 372
K
Sbjct: 577 K 577
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 154/372 (41%), Gaps = 8/372 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F ++ +K P+ T +AL+ + A L +MS G + YN ++N+ +
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
N ++ +L + +N SP++VTYN + D + A + + + +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+T+ Y A L M C+ + +Y+ L+ + + + ++ +M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ N+ YT +I K + + A ++ + + + + N+L+ +N
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
AE ++ +GI P T+ + G K G LE F K I + +P+ +
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE--QGCLPNLLTYS 639
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
+ L ++G ++ AE+L L G + EI Y ++ Y +GK+ + RM K
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 388 NVQMDAETQKVL 399
Q T VL
Sbjct: 700 GCQPTLWTYGVL 711
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN----HMLNLYISNGQLDKVPQMLQEL 106
L+ S + A + ++ +S+ G Y+ H+ L ++ +D+ +ML E
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE- 209
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
P+++ YN + A + AE ++ ++++ PD +Y+++ + + +
Sbjct: 210 --GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD 267
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV- 225
A +M K C N V YS+L++ + G +E + ++M + + +TC
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM--ILHGILPTAHTCTG 325
Query: 226 -ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I +L +G +E A ++ + ++ + L++ L++A ++R+ G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 285 IKPCYTTWELL 295
+ P T+ L
Sbjct: 386 VFPNTVTYNAL 396
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 134/352 (38%), Gaps = 28/352 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H + + AE L + M E G + Y M++ NG +M ++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+++TY+ + A + E AE F EL++ + PD I+Y + YI
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTN--------------------MGY----KD 201
E A L M K C+ Y L+ N GY +D
Sbjct: 687 EHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQD 746
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
V + K+ L ++ ++S+L G + +A + S D N LL
Sbjct: 747 AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL 806
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ + +++A + + T+G + ++ L + + ++ F+ + +R
Sbjct: 807 CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENML--MRT 864
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
W PD + + L G D L + ++ S IY L R +K
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 130/361 (36%), Gaps = 39/361 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+A++++ ++ A+AE +M+K+ E Y M+ + LD Q+ ++ K
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ VTY+ + A E+ I P + + M E
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +M+ + C N Y++L+S G + ++ +M N Y +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Query: 228 SLVK-------------LGEFEKAENIYDEWESISG---TGDPR---------------- 255
LV+ +G + NI E I G GDP+
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458
Query: 256 ---VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
N ++ Y + A + + G KP ++ L G+ K +ME F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYA 371
+ + P+ TA + + +D A LL ++ +G + + YN L+
Sbjct: 519 NEMVDD--GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 372 K 372
K
Sbjct: 577 K 577
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 154/372 (41%), Gaps = 8/372 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F ++ +K P+ T +AL+ + A L +MS G + YN ++N+ +
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
N ++ +L + +N SP++VTYN + D + A + + + +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+T+ Y A L M C+ + +Y+ L+ + + + ++ +M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ N+ YT +I K + + A ++ + + + + N+L+ +N
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
AE ++ +GI P T+ + G K G LE F K I + +P+ +
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE--QGCLPNLLTYS 639
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKD 387
+ L ++G ++ AE+L L G + EI Y ++ Y +GK+ + RM K
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 388 NVQMDAETQKVL 399
Q T VL
Sbjct: 700 GCQPTLWTYGVL 711
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN----HMLNLYISNGQLDKVPQMLQEL 106
L+ S + A + ++ +S+ G Y+ H+ L ++ +D+ +ML E
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE- 209
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
P+++ YN + A + AE ++ ++++ PD +Y+++ + + +
Sbjct: 210 --GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD 267
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV- 225
A +M K C N V YS+L++ + G +E + ++M + + +TC
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM--ILHGILPTAHTCTG 325
Query: 226 -ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I +L +G +E A ++ + ++ + L++ L++A ++R+ G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 285 IKPCYTTWELL 295
+ P T+ L
Sbjct: 386 VFPNTVTYNAL 396
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 134/352 (38%), Gaps = 28/352 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+H + + AE L + M E G + Y M++ NG +M ++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ P+++TY+ + A + E AE F EL++ + PD I+Y + YI
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTN--------------------MGY----KD 201
E A L M K C+ Y L+ N GY +D
Sbjct: 687 EHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQD 746
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
V + K+ L ++ ++S+L G + +A + S D N LL
Sbjct: 747 AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL 806
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ + +++A + + T+G + ++ L + + ++ F+ + +R
Sbjct: 807 CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENML--MRT 864
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
W PD + + L G D L + ++ S IY L R +K
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 130/361 (36%), Gaps = 39/361 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
+A++++ ++ A+AE +M+K+ E Y M+ + LD Q+ ++ K
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ VTY+ + A E+ I P + + M E
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +M+ + C N Y++L+S G + ++ +M N Y +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Query: 228 SLVK-------------LGEFEKAENIYDEWESISG---TGDPR---------------- 255
LV+ +G + NI E I G GDP+
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458
Query: 256 ---VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
N ++ Y + A + + G KP ++ L G+ K +ME F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYA 371
+ + P+ TA + + +D A LL ++ +G + + YN L+
Sbjct: 519 NEMVDD--GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 372 K 372
K
Sbjct: 577 K 577
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+AL+ +Y EA ++ + GF + Y +LN Y + + K Q+ +K+
Sbjct: 367 NALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKR 426
Query: 109 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P++V+YN + A S A K E+++ I P+ +S TL + + K
Sbjct: 427 NKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVK 486
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
T L E R + N VAY++ + N+G D+ + ++K M K + YT +IS
Sbjct: 487 IDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLIS 546
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K+ ++ +A + +E + V + + AY + Q+ AES +N + + G P
Sbjct: 547 GCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYP 606
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKK 314
T+ + Y EK F++
Sbjct: 607 DVVTYTAMLDAYNAAENWEKAYALFEE 633
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 168/373 (45%), Gaps = 20/373 (5%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEA----EALMEKMSECGFLKCP--LPYN 84
++FE + PDT + ++H V+ ++ +A ++ EK SEC P + +
Sbjct: 277 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSEC----TPDVVTFT 332
Query: 85 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+++LY GQ++ + + P++V+YN + A A++ A F E+K+
Sbjct: 333 SIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQN 392
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
PD +SY++L + Y + + P KA M++ + N V+Y++L+ Y + G +
Sbjct: 393 GFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADA 452
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
++I ++M + N ++++ + K + + E + N + +
Sbjct: 453 IKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGS 512
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
+N + + A Y + K IK T+ +L G K + + L F + I ++ +
Sbjct: 513 CMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALS-FMEEIMHLK--L 569
Query: 324 P-DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTY--AKAGKMPLI 379
P + ++A +QG I AE ++++G + Y ++L Y A+ +
Sbjct: 570 PLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYA 629
Query: 380 IVERMQKDNVQMD 392
+ E M+ ++++D
Sbjct: 630 LFEEMEASSIKLD 642
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 3/279 (1%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FF + PD S +LL++Y +++K +A + ++M + YN +++ Y
Sbjct: 385 FFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYG 444
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
SNG L ++L+E+++ P+VV+ LAAC + K + + I + +
Sbjct: 445 SNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTV 504
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + + +KA K M K+ + + V Y+ L+S M E L +++
Sbjct: 505 AYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEI 564
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
M L ++ Y+ I + K G+ +AE+ ++ +S D +L AY
Sbjct: 565 MHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENW 624
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
E A + + + IK L + K GQ +VL
Sbjct: 625 EKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVL 663
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 13/317 (4%)
Query: 3 RRRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKK 60
R + +R + R QA+ L FFE + + PD T +A+++++ + +
Sbjct: 150 RNDIYNMMIRLHARHNRTDQARGL-------FFE-MQEWRCKPDVETYNAIINAHGRAGQ 201
Query: 61 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNL 119
A +M+ M YN+++N S+G + + +++ +N PD+VT+N+
Sbjct: 202 WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNI 261
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM--EK 177
L+A S A F +K T I PD + + + +K+ +KA M +K
Sbjct: 262 ILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKK 321
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
C + V ++S++ LY+ G + + M++ K N Y +I + G +
Sbjct: 322 SECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNE 381
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
A ++E + D LL AY + A ++R+ +KP ++ L
Sbjct: 382 AHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALID 441
Query: 298 GYLKKGQMEKVLECFKK 314
Y G + ++ ++
Sbjct: 442 AYGSNGLLADAIKILRE 458
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 134/339 (39%), Gaps = 44/339 (12%)
Query: 94 GQLDKVPQMLQELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G ++ ++ + LK KN YN+ + A N + A F E+++ + PD +
Sbjct: 129 GSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVET 188
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM- 210
Y+ + + + + A + +M + +R Y++L++ + G E L + KKM
Sbjct: 189 YNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 248
Query: 211 ------------MSLFAKMNDAEYT----------------------CVISSLVKLGEFE 236
+ L A + A+Y+ VI LVKL +++
Sbjct: 249 ENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 308
Query: 237 KAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
KA I++ P V ++ Y Q+E E+ +N ++ +G+KP ++
Sbjct: 309 KAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNA 368
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-R 353
L Y +G M+ F I + PD T+ N A + + R
Sbjct: 369 LIGAYAARG-MDNEAHLFFNEIKQ-NGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKR 426
Query: 354 NAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQ 390
N + YN+L+ Y G + + I+ M+++ +Q
Sbjct: 427 NKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQ 465
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 102/281 (36%), Gaps = 44/281 (15%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAAC--------------- 124
+ YN + ++ G+ DK + + + KK D VTY + ++ C
Sbjct: 504 VAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEE 563
Query: 125 --------------------ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ Q AE F +K + PD ++Y+ + Y E
Sbjct: 564 IMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAEN 623
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA +EME + + + +A ++L+ + G VL + + M +D +
Sbjct: 624 WEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFE 683
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S+ L ++ A ++ E N L + ++E + +++ G
Sbjct: 684 MVSACSILQDWRTAVDMIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASG 743
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
T+ +L L G K LE V +W+ D
Sbjct: 744 ADVNLNTYSILLKNLLSSGNWRKYLE--------VLQWMED 776
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 28/307 (9%)
Query: 84 NHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N +L+ + L +V ++ E L + P VVTYN + AC Q D A + + ++
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+IDP+ ++Y+T+ + + A EM++ R N Y++L+S +
Sbjct: 202 RRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH 261
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NIL 260
L + ++ ND +T +I L + +A+NI+ + P VP N L
Sbjct: 262 ALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVA--PTVPVYNSL 319
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLECFKKAIG 317
+ + A +F+ ++ KG++P T ++ G GQM+ + LE +++
Sbjct: 320 IHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS-- 377
Query: 318 SVRKWVPDHRLITAAYNKLEEQ----GDIDGAEHLLVTLRNAGHVSTE----IYNSLLRT 369
L AAYN L ++ G++D A LVT V E Y+SL+
Sbjct: 378 -------GIALNAAAYNVLIDEYCKSGNLDEA---LVTCTRMSEVGVEPNVVTYSSLIDG 427
Query: 370 YAKAGKM 376
++K G+M
Sbjct: 428 HSKNGEM 434
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P++ TYN +++ +++ + A + +L K + P+ + ++TL + +A
Sbjct: 241 PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNI 300
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC--VISSL 229
+M + Y+SL+ GY E L +++++ + E+TC V+ L
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIR--KGLRPDEFTCSIVVRGL 358
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
G+ + A + + + N+L+ Y L+ A R+ G++P
Sbjct: 359 CDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNV 418
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ L G+ K G+ME + + + + + P+ TA + + GD+D A L
Sbjct: 419 VTYSSLIDGHSKNGEMEIAMAIYTEMVA--KGVEPNVVTYTALIHGHAKNGDMDAAFWLQ 476
Query: 350 VTLRNAGHVSTEIYNSLL 367
+ G S I S+L
Sbjct: 477 KEMEEKGIYSNAITVSVL 494
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +++ +G + QE+ +K PD T ++ + + A + ++
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
++ I + +Y+ L Y K ++A T M + N V YSSL+ ++ G +
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ I+ +M++ + N YT +I K G+ + A + E E + ++L+
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495
Query: 262 AAYINRNQLEMAESF 276
N+++ A F
Sbjct: 496 DGLCRENRVQDAVRF 510
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/290 (17%), Positives = 115/290 (39%), Gaps = 11/290 (3%)
Query: 24 QALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
QA + +N F ++P P ++L+H ++ + EA A +++ G
Sbjct: 290 QANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEF 349
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
+ ++ GQ+ + L+ ++++ + + YN+ + + + A +
Sbjct: 350 TCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRM 409
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ ++P+ ++YS+L + K E A EM + N V Y++L+ + G
Sbjct: 410 SEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDM 469
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT-GDPRVPN- 258
D + K+M N + ++ L + + A E+ + +P + N
Sbjct: 470 DAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANS 529
Query: 259 -----ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
++ YI+ Q A F++ + G+ P T+ L+ G G
Sbjct: 530 VTYMTLIYGLYID-GQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLG 578
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 6/268 (2%)
Query: 85 HMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KK 142
+++LY S+G D ++ E L++ + V+++N L AC + + F L ++
Sbjct: 99 RLISLYGSSGMFDNARKVFDEMLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEE 158
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS-LYTNMGYKD 201
+I+PD +SY+T+ + +M + A + L E+EK+ + + + +++LL+ LY N G D
Sbjct: 159 LEIEPDLVSYNTVMKAFCEMGSLDSAVSLLDEIEKKGLKPDLITFNTLLNGLYAN-GRFD 217
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
RIW++M K + Y + L + A + +E +S D N L+
Sbjct: 218 AGERIWQRMKEKNVKPDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGIEFDIFSYNALI 277
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
++N LE A+ +Y + IKP T++ L ++KG + + K A+ S K
Sbjct: 278 RGFVNEGDLEEAKGWYGEIRKSDIKPDKLTFKTLIPFVVEKGDVAFAFDLCKDALSS--K 335
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLL 349
LI + L ++ I+ A+ L+
Sbjct: 336 LAVKEALIQPVLDALAKESKINEAKELV 363
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S ++ ++ + A +L++++ + G + +N +LN +NG+ D ++
Sbjct: 163 PDLVSYNTVMKAFCEMGSLDSAVSLLDEIEKKGLKPDLITFNTLLNGLYANGRFDAGERI 222
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q +K KN PD +YN L A + + A K E+K I+ D SY+ L ++
Sbjct: 223 WQRMKEKNVKPDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGIEFDIFSYNALIRGFVN 282
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E+A E+ K + +++ + +L+ G
Sbjct: 283 EGDLEEAKGWYGEIRKSDIKPDKLTFKTLIPFVVEKG 319
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 3/282 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S LLHS+ +N +A A++++M GF YN ++ +G+LD+ +++QE+
Sbjct: 385 TYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM 444
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD+ TYN + + + E AE F L + + + I+Y+TL ++
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ EM C+ + ++Y+ L+ G D + + ++M++ K N+ Y +
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNML 564
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ L K G+ A + E + T D N L+ A + +L + +
Sbjct: 565 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 624
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
P T+ +L + K ++ KAI VP+ R
Sbjct: 625 HPDIVTYNILISWHCKVRLLDDAAMLLDKAISG--GIVPNER 664
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 136/317 (42%), Gaps = 10/317 (3%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLA 122
EA L+++M G + + Y +L Q D+ ML L + +VV N +
Sbjct: 265 EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE---VNVVMLNTVIR 321
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
C ++ A + + + PD +YS L K+ A L EME++ C
Sbjct: 322 GCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAP 381
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N V YS+LL + G D+ + +M++ MN Y +I +L K G+ ++A +
Sbjct: 382 NIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLV 441
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E +S D N ++ N + +E AE + L+ +G+ T+ L L+
Sbjct: 442 QEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRN 501
Query: 303 GQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
G+ ++ L + + G + + LI A L ++G++D + LL + G
Sbjct: 502 GRWQEGLRLASEMLLHGCQLDVISYNGLIKA----LCKEGNVDRSMALLEEMVTKGIKPN 557
Query: 361 EI-YNSLLRTYAKAGKM 376
YN L+ KAGK+
Sbjct: 558 NFSYNMLINELCKAGKV 574
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 12/280 (4%)
Query: 96 LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
LD++P+ + SP +YN+ L+ A + A + + + ++ P ++
Sbjct: 129 LDQMPR-----RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
++ A L+ M + C + V Y +++ G E + +M+ +
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
+ + ++ L LG +A + D + LL Q + A +
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK 335
RL + T G L +G++ + E ++ +GS + PD + +
Sbjct: 304 MLGRLPEVNVVMLNTVIR----GCLTEGKLARATELYEM-MGS-KGCPPDVHTYSILMHG 357
Query: 336 LEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
L + G A +L + G + Y++LL ++ + G
Sbjct: 358 LCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 397
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 153/392 (39%), Gaps = 23/392 (5%)
Query: 4 RRPH------------GAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMR---GPD-- 46
+RPH G Q+ A +Y VA R +E D +R PD
Sbjct: 160 KRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEA--YELFNDMLRIGIFPDVS 217
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + LLH+ + + E+E L+ K+ + G +N + G L ML
Sbjct: 218 TFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV 277
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ +PDVVTYN + ++ AEK +L ++PD +Y+TL Y KM +
Sbjct: 278 IREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGML 337
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L+ + + Y SL++ D L ++ + K Y +
Sbjct: 338 QNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNML 397
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L + G +A + +E + D N+++ + A + N + KG
Sbjct: 398 IKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGY 457
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L GY K+ +ME ++ K PD + N L + +
Sbjct: 458 VPDVFTFNTLIDGYCKQLKMETTIQILNKMWS--HGVTPDVITYNSVLNGLSKAVKNEDL 515
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
T+ G V +I YN L + KAGK+
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKV 547
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 129/316 (40%), Gaps = 42/316 (13%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
N P V++YN + + A K FL +K I PD +++ + + + P A
Sbjct: 106 NCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSA 165
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L M + C+ N VAY ++++ + Y+ E ++ M+ + + + + ++ +
Sbjct: 166 LRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHT 225
Query: 229 LVKLGEFEKAE------------------NIYDEWESISG-----------------TGD 253
L K GE +++E NI+ + G T D
Sbjct: 226 LCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPD 285
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
N L+ + + AE + ++LV G++P T+ L GY K G ++ + +
Sbjct: 286 VVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
AI + +VPD + N L + +ID A L G T I YN L++ +
Sbjct: 346 GAI--CKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQ 403
Query: 373 AGKMPLIIVERMQKDN 388
G +I++ +Q N
Sbjct: 404 EG----LILQALQMMN 415
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 139/344 (40%), Gaps = 17/344 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L+ Q +A +M +MSE G YN ++N G + ++ + + K
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PDV T+N + Q ET + ++ + PD I+Y+++ + K E
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLM 516
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
T + M ++ C N++ Y+ L G +E L + ++++ + + +IS
Sbjct: 517 ETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGF 576
Query: 230 VKLGEFEKAENIY---DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
G+ + A ++ E +S T NI++ A+ + L M E + + G
Sbjct: 577 ANNGDLKGAYQLFRRMGEQYKVSHT--TATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634
Query: 287 PCYTTWELLTWGYLKKGQMEK----VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
P T+ ++ G+ G + +LE +K ++P N L Q +
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKG------FIPSLTTFGRVINCLCVQHRV 688
Query: 343 DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
A ++ + + G V E+ NS+ K P I+VE + K
Sbjct: 689 HEAVDIIHFMVHNGIVP-EVVNSISEADKKVVAAPKIVVEDLLK 731
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 189/409 (46%), Gaps = 48/409 (11%)
Query: 26 LQTRARENFFENLPDKMRG-----PDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
L R R N +++ D+M PDT + L+ + +N E ++MS K
Sbjct: 201 LLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSR---FK 257
Query: 79 CP---LPYNHMLNLYISNGQLDKVPQMLQELKK---NTSPDVVTYNLWLAACASQNDKET 132
C + YN +++ G+++ ++ + K N +PDVVTY + +++ +
Sbjct: 258 CDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDE 317
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK------AATTLKEMEKRTCRKNRVA 186
A F E+ + P+ I+Y+TL +++ +K A TC N
Sbjct: 318 ALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLN--- 374
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW- 245
+L++ + N G ++ L +++KMM L + + A Y+ +I +L + G FE+AE ++DE
Sbjct: 375 --TLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELS 432
Query: 246 -ESISGTGDPRVPNILLAAY------INRN-QLEMAESFYNRLVTKGIKPCYTTWELLTW 297
+ I D P L+AAY + RN + AE + +L+ +G + ++++L
Sbjct: 433 EKEILLRDDGCTP--LVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPL-SFKILIK 489
Query: 298 GYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
G+ ++G E E + R +VPD + + L ++G+ A L + + H
Sbjct: 490 GHCREGTFEAGYELL--VLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSH 547
Query: 358 V-STEIYNSLL-RTYAK-----AGKMPLIIVERMQKDNVQMDAETQKVL 399
V T ++S+L R AK + + ++++E + N+ + T ++L
Sbjct: 548 VPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLL 596
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ++ Y G + Q+ +K SP VVT+N L + A+ F E+
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 142 KT-KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS-------- 192
T + PD +++ L + K + ++ KEM + C + V Y++L+
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278
Query: 193 ----------------------LYTNM--GY-----KDEVLRIWKKMMSLFAKMNDAEYT 223
YT + GY DE L ++++M+S K N+ Y
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNRL 280
+I L ++ + +K + I++ ++ G G D N L+ A+ N L A + ++
Sbjct: 339 TLIKGLCEVQKIDKIKQIFE--GALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ ++P T+ +L ++G E+ + F
Sbjct: 397 MVLNVRPDSATYSVLIRNLCQRGNFERAEQLF 428
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 38 LPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
L D+M G PD T S+L+ + + +AEA+++ M + G + YN M+ Y
Sbjct: 225 LFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYC 284
Query: 92 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWL------AACA------------SQNDKET 132
S GQL++ ++L+++ PDVVTY L + CA Q T
Sbjct: 285 SLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNST 344
Query: 133 AEKAFLELKKTK---IDP---------DWI-----SYSTLTSLYIKMELPEKAATTLKEM 175
L TK ID D I +++ L Y K +KA T EM
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ R + V+YS+++ + +G ++ + + +M+S N +T +I L +GE+
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+K E + E + D N ++ ++ A+ F++ ++ G+KP ++ L
Sbjct: 465 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTL 524
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
GY G+M++ ++ F + + + PD A N + G ++ A
Sbjct: 525 IDGYCFVGKMDESIKQFDRMVSIGLR--PDSWTYNALLNGYFKNGRVEDA 572
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 47 TCSALLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHML-NLYI---SNGQLDKVPQ 101
T + L+ K++ +A + + +M E G+ YN ++ L + S L+ +
Sbjct: 131 TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLH 190
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
M + N SP+VV+Y+ + + + + A F E+ PD ++YS+L K
Sbjct: 191 MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ KA L+ M + N Y+ ++ Y ++G +E +R+ KKM + +
Sbjct: 251 AQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 310
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I K+G +A +++D + + +ILL Y + L + ++
Sbjct: 311 YILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 370
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
GI + + +L Y K G ++K + F
Sbjct: 371 RDGIPFEHRAFNILICAYAKHGAVDKAMTAF 401
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 115 VTYN-LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
VT N L C + + + F + + PD SY+ L + ++A L
Sbjct: 130 VTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLL 189
Query: 174 EMEKR---TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
M C N V+YS+++ + G D+ ++ +M+ + Y+ +I L
Sbjct: 190 HMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLC 249
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K KAE I + R NI++ Y + QLE A ++ G++P
Sbjct: 250 KAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 309
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD-IDGAEHLL 349
T+ LL Y K G+ + F + +K P+ + + +G ID + L
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQK--PNSTIYHILLHGYATKGALIDVRDLLD 367
Query: 350 VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
+ +R+ +N L+ YAK G +
Sbjct: 368 LMIRDGIPFEHRAFNILICAYAKHGAV 394
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 102/233 (43%), Gaps = 6/233 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+VV+YN + + + K F + + PD +Y+ L + Y K E A
Sbjct: 516 PNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALAL 575
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+EM ++ + + + +L G ++ KM+ ++ Y V+ L +
Sbjct: 576 YREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCE 635
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
++A ++++ S D NI++ A + +++ A+S ++ +V +G P T
Sbjct: 636 NSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVIT 695
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQGDI 342
+ L+ +++G +E+ + F S+ K D ++ +L E+GD+
Sbjct: 696 YSLMIKSRIEEGLLEESDDLFL----SMEKNGCAADSHMLNVIIRRLLEKGDV 744
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 3/282 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S LLHS+ +N +A A++++MS GF YN ++ +G+LD+ +++QE+
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM 447
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K + PD+ TYN + + + + AE F L + + + I+Y+TL +
Sbjct: 448 KSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRW 507
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++ EM C + V+Y+ L+ G D + + ++MM+ K N+ Y +
Sbjct: 508 QEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNML 567
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ L K G+ A + E + T D N L+ A + +L + +
Sbjct: 568 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 627
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
P T+ +L + K ++ KA+ VP+ R
Sbjct: 628 HPDIVTYNILISWHCKVRLLDDASMLLDKAVSG--GIVPNER 667
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 10/317 (3%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLA 122
EA L+++M G + Y +L Q D+ ML + + +VV N +
Sbjct: 268 EAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPE---VNVVMLNTVIR 324
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
C ++ A + + + PD +Y+ L K+ A L EME++ C
Sbjct: 325 GCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAP 384
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N V YS+LL + G D+ + +M + MN Y +I +L K G+ ++A +
Sbjct: 385 NIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLV 444
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E +S D N ++ N +Q++ AE + L+ +G+ T+ L L
Sbjct: 445 QEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHS 504
Query: 303 GQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 360
G+ ++ L + + G V + LI A L ++G++D + LL + G
Sbjct: 505 GRWQEGLRLANEMVLHGCPLDVVSYNGLIKA----LCKEGNVDRSMMLLEEMMTKGIKPN 560
Query: 361 EI-YNSLLRTYAKAGKM 376
YN L+ KAGK+
Sbjct: 561 NFSYNMLINELCKAGKV 577
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/293 (17%), Positives = 109/293 (37%), Gaps = 9/293 (3%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ P T+ + A A + + PD + Y T+ +
Sbjct: 172 LRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGV 231
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+AAT L EM C + ++ ++ +G+ E R+ +MM + Y +
Sbjct: 232 AEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFL 291
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L + + ++A + ++ + N ++ + +L A Y + +KG
Sbjct: 292 LRGLCRTRQADEAYAMLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGC 347
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ +L G K G+ + + + P+ + + G D A
Sbjct: 348 PPDVHTYNILMHGLCKLGRCGSAVRMLDEM--EEKGCAPNIVTYSTLLHSFCRNGMWDDA 405
Query: 346 EHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
+L + G ++++ YN ++ K GK+ + +V+ M+ + D T
Sbjct: 406 RAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 2/264 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
S+L+ + + ++ A +L ++M G L + ++ G++ + +++ K
Sbjct: 119 SSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P+V YN+ L S E A F E+K PD ++Y+TL K E+
Sbjct: 179 HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEE 238
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ M N + +S+L+ G ++ L ++ M+ K N YT +IS
Sbjct: 239 GCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV-TKGIK 286
L + + +A ++++ D N L+A Y R ++ AE Y + G++
Sbjct: 299 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQ 358
Query: 287 PCYTTWELLTWGYLKKGQMEKVLE 310
P T+ L G+ K G++ + E
Sbjct: 359 PTIVTFNTLIDGFCKLGKLGRANE 382
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 137/332 (41%), Gaps = 4/332 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S+++ S V+ K E+ ++E+M G +N ++ + + ++K ++ Q +
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PD V+Y++ + A + + K E+ P +YS+L K
Sbjct: 72 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A++ EM + +R+ + L+ G + +K+M + N Y +
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L G+ E+A ++ E +S S + D N LL A ++E + + G
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G + G++EK LE F + + K P+ T + L + A
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK--PNKYTYTTLISGLCRAEKVIQA 309
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L + A + YNSL+ Y K G M
Sbjct: 310 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 341
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 123/294 (41%), Gaps = 6/294 (2%)
Query: 29 RARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 86
+ARE ++++ + PD S L+H + K E+ ++ +M G Y+ +
Sbjct: 63 KARE-VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL 121
Query: 87 LNLYISNGQLDKVPQMLQEL-KKNTSPD-VVTYNLWLAACASQNDKETAEKAFLELKKTK 144
+ ++D + E+ + PD ++ Y L L C + K+ +E+ F ++ K
Sbjct: 122 VRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASER-FKQMPKHG 180
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
P+ Y+ L E+A T EM+ +C + V Y++LL +E
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 205 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 264
++++ M + N ++ +I L + GE EKA ++ + L++
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
++ A + ++ I P + L GY K+G M++ + +++ G
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 7/272 (2%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
KN + +V TY+ + + + E + K E+ +PD +++ + + + EK
Sbjct: 4 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + M + + + V+Y L+ +G DE L+I +M+ + Y+ ++
Sbjct: 64 AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGI 285
+L K + A +++DE I G P L+ +++ A + ++ G
Sbjct: 124 ALAKARRVDHASSLFDEM--IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGC 181
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+P + +L G GQ+E+ F + PD + + + ++
Sbjct: 182 QPNVPVYNVLLHGLCSSGQLEQANTLFAEM--KSHSCSPDVVTYNTLLDAVCKARRVEEG 239
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
L +R AG+V I +++L+ + G++
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGEL 271
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 10/234 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN-GQLDKVPQMLQE 105
T S L+H + + +A + M E G C P + IS + +KV Q +
Sbjct: 257 TFSTLIHGLCRTGELEKALEVFGSMLEAG---CK-PNKYTYTTLISGLCRAEKVIQAREL 312
Query: 106 LKKNTS----PDVVTYNLWLAACASQNDKETAEKAFLELKK-TKIDPDWISYSTLTSLYI 160
+K T PD V YN +A + + AEK + E+ + P ++++TL +
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K+ +A + EM + + Y L++ + DE L ++K+M ++
Sbjct: 373 KLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
+ L K G ++A +++ +P IL + I ++E A+
Sbjct: 433 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQ 486
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++ I + +YS++ +K PE++ L+EM C + A++ ++ +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
++ +++ M+ K ++ Y +I L K+G+ +++ I E T + +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
L+ A +++ A S ++ ++ G P + L G + G+++ E FK+
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQM--PK 178
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKA 373
P+ + + L G ++ A L +++ S ++ YN+LL KA
Sbjct: 179 HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSH-SCSPDVVTYNTLLDAVCKA 233
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 2/199 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + +K +A L EKM++ + YN ++ Y G +D+ ++ +E+
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351
Query: 107 KKNTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
P +VT+N + A + E+ + D +Y L + +
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATK 411
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A K+M ++ + V+ S + G D+ +++ A N +
Sbjct: 412 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 471
Query: 225 VISSLVKLGEFEKAENIYD 243
+ SL+KLG E A+ + +
Sbjct: 472 LSESLIKLGRVEDAQKLME 490
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L++ + + EA +L++++ G+ + YN +++ N Q+D +L +
Sbjct: 145 TFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM 204
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PDV+TYN + + + ++ + I PD I++S + ++ K
Sbjct: 205 EKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQL 264
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM +R+ N V Y+SL++ G DE ++ M+S N Y +
Sbjct: 265 LEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTL 324
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ K + A I GD N L Y Q AE R+V+ G+
Sbjct: 325 VNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGV 384
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ +L G + G++EK L
Sbjct: 385 LPDIYTFNMLLDGLCEHGKIEKAL 408
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 160/402 (39%), Gaps = 15/402 (3%)
Query: 8 GAQVRAQSYRQRVAQA-QALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEA 64
GA YR+R+ +++ F ++ + P S LL + + KK
Sbjct: 33 GAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAV 92
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAA 123
+L + G ++ +++ + +L L ++ K P +VT+ +
Sbjct: 93 ISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNG 152
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
N + A ++ +P+ + Y+T+ + + A L MEK R +
Sbjct: 153 FCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPD 212
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
+ Y+SL++ + G RI MM + + ++ +I K G+ +A+ YD
Sbjct: 213 VITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYD 272
Query: 244 EWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
E I + DP + N L+ L+ A+ N +V+KG P T+ L GY K
Sbjct: 273 EM--IQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCK 330
Query: 302 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+++ ++ + S D Y + G + AE +L + + G V +
Sbjct: 331 SKRVDDAMKIL--CVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCG-VLPD 387
Query: 362 IY--NSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
IY N LL + GK+ L+ +E +QK + T ++
Sbjct: 388 IYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNII 429
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 110/261 (42%), Gaps = 3/261 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++L+ + K + ++ M G + ++ M++++ GQL + +
Sbjct: 211 PDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQ 270
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E ++++ P++VTYN + + A+K + P+ ++Y+TL + Y K
Sbjct: 271 YDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCK 330
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A L M + Y++L Y G + ++ +M+S +
Sbjct: 331 SKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYT 390
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ L + G+ EKA ++ + NI++ N++E A + L
Sbjct: 391 FNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLA 450
Query: 282 TKGIKPCYTTWELLTWGYLKK 302
KG+ P T+ + G +K
Sbjct: 451 LKGVSPDVITYTTMMIGLRRK 471
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S L++ Y + AEA L ++ + + YN +++ G LD M
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ +K PDVVT+ + + + A++ F E+ + PD I+Y+T +K
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ P KA +EM+ + + Y+ L++ +G D+ + +KM +
Sbjct: 465 LGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT +I + + G KAE ++ + +L+ +Y R +L+ A+ +++ +
Sbjct: 525 YTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQ 584
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
KG+ P T+ L +G K+ M+ F
Sbjct: 585 DKGVSPNVITYNALIYGLCKENMMDVAYNLF 615
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L++ + +A L++KM G + + Y +++ ++ +G L K ++
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ LKK P VVTY + + + A + + A+K F E++ + P+ I+Y+ L K
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A EME + N+ Y+ L++ +N+ Y + L+++K M+ K +
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664
Query: 222 YTCVISSLVK 231
++ ++ L K
Sbjct: 665 HSALMKHLSK 674
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 3/246 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + Q A+ L ++M G + Y + + G K M
Sbjct: 415 PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+K + PD++TYN+ + + + A + +++ I PD ++Y+++ ++
Sbjct: 475 KEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLI 534
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
L KA +M K+ + V Y+ L+ Y G D + + +M N
Sbjct: 535 SGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVIT 594
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I L K + A N++ E ES + + IL+ N + A Y ++
Sbjct: 595 YNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDML 654
Query: 282 TKGIKP 287
+ IKP
Sbjct: 655 DREIKP 660
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 55/330 (16%), Positives = 127/330 (38%), Gaps = 14/330 (4%)
Query: 66 ALMEKMSECGFLKCPL-PYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAAC 124
A+++ +++ GF+K + + + G LD + + +N+ V +L +
Sbjct: 90 AILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGI--GCGRNSEVSVKLLDLLIQVF 147
Query: 125 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 184
A + E F ++ + PD + + + L + + M K R
Sbjct: 148 AKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTI 207
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
V +++++ G + + M ND Y +++ L GEF++A+ + ++
Sbjct: 208 VTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQ 267
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+ N L+ + + E A ++ +G P T+ + + + G+
Sbjct: 268 MSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGR 327
Query: 305 MEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
+ + +PD + + Y++L G+ A L LR+ V +
Sbjct: 328 VSDARRYLDVMVNE--DLMPDLVSYNTLIYGYSRL---GNFAEALLLFSELRSKNLVPSV 382
Query: 362 I-YNSLLRTYAKAGKMPLIIVERMQKDNVQ 390
+ YN+L+ + G + I + M+ D ++
Sbjct: 383 VTYNTLIDGGCRTGNLD--IAKGMKDDMIK 410
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 143/352 (40%), Gaps = 61/352 (17%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE-LK 141
N +L+ I NG++DK ++ ++LKK PD VTY+ +A CA D + A +E +K
Sbjct: 262 NSILSTMIYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIAGCAKTRDGYSKALALIEDIK 321
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ + D + Y + ++ L +A T +EM N YSSLL+ Y + G
Sbjct: 322 ASGLTQDAVIYGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQ 381
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ R+ + + + N Y ++++ KA ++D E+ D ++
Sbjct: 382 QAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEGLQRDMVSFCSMM 441
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT----------WG----------YLK 301
AY + L+ A+ ++ ++ +G+KP Y +LL WG Y K
Sbjct: 442 DAYAKSDMLKEAQETFDSMIAQGMKPVYMLMQLLDLSGSLCSYGWWGSVGYSILISAYAK 501
Query: 302 KGQMEKVL------------EC----------------FKKAIGSVRKWVPDHRL----- 328
G+M+ VL EC + + +V K +
Sbjct: 502 LGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKMDAEGCGSDRG 561
Query: 329 ---ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 376
I Y E+ GD+ A L + GH E YN+L + Y K GKM
Sbjct: 562 TFNILIGYFAKEDLGDL--ALKTLEDMETRGHRPNEATYNALFQGYVKNGKM 611
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 155/387 (40%), Gaps = 69/387 (17%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV L + R+N F C+++L + + N K +A L E++ + G
Sbjct: 243 RVFNELPLDSEVRKNVF-----------VCNSILSTMIYNGKIDKAFRLFEQLKKEGLQP 291
Query: 79 CPLPYNHML-NLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKA 136
+ Y+ ++ + K +++++K + + D V Y + CASQ A+
Sbjct: 292 DTVTYSTVIAGCAKTRDGYSKALALIEDIKASGLTQDAVIYGAMMNVCASQGLDREAQAT 351
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
F E+ P+ YS+L + Y ++A L+ + N V Y+SL++ Y N
Sbjct: 352 FQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYNSLMNAYAN 411
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
C + S KA ++D E+ D
Sbjct: 412 ---------------------------CQMPS--------KAREVFDRIEAEGLQRDMVS 436
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ AY + L+ A+ ++ ++ +G+KP Y +LL G + C
Sbjct: 437 FCSMMDAYAKSDMLKEAQETFDSMIAQGMKPVYMLMQLLDL----SGSL-----CSYGWW 487
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA--GHVSTEIYNSLLRTYAKAG 374
GSV + ++ +AY KL G++DG L+ + G ++N+LL+ Y AG
Sbjct: 488 GSV-----GYSILISAYAKL---GEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAG 539
Query: 375 KMPLI--IVERMQKDNVQMDAETQKVL 399
M + ++++M + D T +L
Sbjct: 540 YMDGVTAVLKKMDAEGCGSDRGTFNIL 566
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 12/228 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK--NTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
Y+ +++ Y G++D V +++ +++K N D++ +N L + + ++
Sbjct: 492 YSILISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKM 551
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
D +++ L + K +L + A TL++ME R R N Y++L Y G
Sbjct: 552 DAEGCGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGKM 611
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG--EFEKAENIYDEWESISGTG---DPR 255
+E+ + M K T + + LG E + + + + + TG
Sbjct: 612 EEMFEALEAM-----KQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPYLKATGIALSYS 666
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
V L+ A + Q+++ + + + T G +P TW+L+ Y+ G
Sbjct: 667 VMERLVEALVETGQMDVVKDALHLMQTTGQQPSQKTWDLVLQKYVSLG 714
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 128/290 (44%), Gaps = 3/290 (1%)
Query: 27 QTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
+TRA + + + P+ S ++ ++K +A L +M G + Y+
Sbjct: 177 ETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 236
Query: 85 HMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+++ + + GQL D + + + +N PDV T+N+ + + + F + K
Sbjct: 237 ALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 296
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
I P+ ++Y +L Y ++ KA + L M +R + +Y+ L+ + + DE
Sbjct: 297 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 356
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ ++K+M + Y +I L KLG+ A + DE D + +L A
Sbjct: 357 MNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDA 416
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+Q++ A + +L +GI+P T+ +L G K G++E F+
Sbjct: 417 LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFE 466
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 112/266 (42%), Gaps = 3/266 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + ++ K E + + M + G + Y +++ Y +++K +
Sbjct: 265 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSI 324
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L + ++ +PD+ +YN+ + + A F E+ I PD ++Y++L K
Sbjct: 325 LYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCK 384
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A + EM R + + YSS+L D+ + + K+ + N
Sbjct: 385 LGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYT 444
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT +I L K G E A NI+++ +++ + N+ + A + +++
Sbjct: 445 YTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 504
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEK 307
P T+E++ K + +K
Sbjct: 505 DNSCIPDAVTYEIIIRSLFDKDENDK 530
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L+ Y K+ +A++++ MS+ G YN +++ + ++D+ + +E+
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 363
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ PDVVTYN + A K E+ + PD I+YS++ K
Sbjct: 364 HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 423
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA L +++ + R N Y+ L+ G ++ I++ ++ + YT +
Sbjct: 424 DKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVM 483
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I G F++A + + + S D I++ + ++++ + AE ++T+G+
Sbjct: 484 IHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRGL 542
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 137/317 (43%), Gaps = 26/317 (8%)
Query: 81 LPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+PY+ + + +N + D + L++N +P + +N L + T +
Sbjct: 42 IPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQ 101
Query: 140 LKKTKIDP----------------DWISYSTLT-SLYIKMELPEKAATTLKEMEKRTCRK 182
++ I+P + I+++TL L +K ++ +A + +
Sbjct: 102 MEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQI-HQALLFHDNVVAMGFQL 160
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
++V Y +L+ +G L + +++ + N Y+ +I + K A ++Y
Sbjct: 161 DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 220
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E S + + + L++ + QL+ A +N+++ + IKP T+ +L G+ K
Sbjct: 221 SEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 280
Query: 303 GQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE 361
G+M++ F + ++ V + + Y ++E ++ A+ +L T+ G V+ +
Sbjct: 281 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE---VNKAKSILYTMSQRG-VNPD 336
Query: 362 I--YNSLLRTYAKAGKM 376
I YN L+ + K K+
Sbjct: 337 IQSYNILIDGFCKIKKV 353
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 168/403 (41%), Gaps = 45/403 (11%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
++A S + R++ + L + N +P+++ T + L++ Y + EA ++E
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGL--VPNRV----TYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQND 129
M + L YN ++N + G + + +++ +K PDVVTYN + C
Sbjct: 301 MKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYS 188
A+K +++ + P+ ++++ K E E+ +KE+ E + V Y
Sbjct: 361 SLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYH 420
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK----------------- 231
+L+ Y +G L + ++M KMN ++ +L K
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR 480
Query: 232 -------------LGEF-----EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
+G F EKA ++DE + I T N L+ + + E+A
Sbjct: 481 GYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELA 540
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
++ L G+ P T+ + GY K+G++EK E + ++I + PD+
Sbjct: 541 MEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIK--HSFKPDNYTCNILL 598
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
N L ++G + A + TL V T YN+++ + K K+
Sbjct: 599 NGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKL 641
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 151/338 (44%), Gaps = 11/338 (3%)
Query: 47 TCSALLHSYVQNKKS---AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
TC+ LL V+ S A A + + M + G +N ++N Y G+L+ ML
Sbjct: 168 TCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGML 227
Query: 104 QEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + + N +PD VTYN L A + + + L++K+ + P+ ++Y+ L Y K
Sbjct: 228 ERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCK 287
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ ++A ++ M++ + Y+ L++ N G E L + M SL + +
Sbjct: 288 LGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVT 347
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I +LG +A+ + ++ E+ + NI L + E LV
Sbjct: 348 YNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELV 407
Query: 282 -TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL-ITAAYNKLEEQ 339
G P T+ L YLK G + LE ++ +G +K + + + + + L ++
Sbjct: 408 EMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE-MG--QKGIKMNTITLNTILDALCKE 464
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+D A +LL + G++ E+ Y +L+ Y + K+
Sbjct: 465 RKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKV 502
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 4/276 (1%)
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETA 133
GF + Y+ ++ Y+ G L +M++E+ +K + +T N L A + + A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEA 470
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
K D ++Y TL Y + E EKA EM++ ++SL+
Sbjct: 471 HNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGG 530
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
+ G + + + ++ +D + +I K G EKA Y+E S D
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
NILL E A +F+N L+T+ + T+ + + K ++++ +
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ ++ PD + L E G + A+ LL
Sbjct: 650 EM--EEKRLEPDRFTYNSIITSLMEDGKLSEADELL 683
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ + K+ A ++++E G L +N ++ Y G+++K + E
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K + PD T N+ L + E A F L T+ + D ++Y+T+ S + K +
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-TEREVDTVTYNTMISAFCKDKKL 641
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
++A L EME++ +R Y+S+++ G E + KK F M
Sbjct: 642 KEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSM 693
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 155/364 (42%), Gaps = 39/364 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ ++ + + AE L++ M E G + +N ++N G+++ ++ E+
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ +PD V+YN + A F E+ + I PD +++++L + K
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A ++EM +R + N + +++L+ + G+ D+ L ++M + + Y +
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY-----------INRNQLEM-- 272
I+ +G ++A + E E+ D + +L+AY +N+ LE
Sbjct: 374 INGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 273 ----------------------AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
A + +++ G++P T+ L G+ K+G +E+ L
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+ + + +PD + N L + A+ LL L + V I Y++L+R
Sbjct: 494 LHDEMVKA--GVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC 551
Query: 370 YAKA 373
A
Sbjct: 552 CRNA 555
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 41/356 (11%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAA-C-ASQNDK--------- 130
YN ++ G + +L++++ P+ VTYN +AA C A + D+
Sbjct: 160 YNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR 219
Query: 131 ------------------------ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
E A K F E+ K + PD +SY+TL Y K+
Sbjct: 220 EGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH 279
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A + EM ++ + V ++SL+ + G + + + ++M +MN+ +T +I
Sbjct: 280 EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI 339
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
K G + A E N L+ Y +++ A + KG+K
Sbjct: 340 DGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVK 399
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P T+ + Y K G + ++ + + +PD ++ L E+ + A
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN--GVLPDAITYSSLIRVLCEEKRLGDAH 457
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
L + + G E+ Y SL+ + K G + L + + M K V D T VL
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 156/362 (43%), Gaps = 21/362 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +AL+ + + +A + +M +C + YN ++N Y G++D+ ++++E+
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ K PDVVTY+ L+A D +A + ++ + + PD I+YS+L + + +
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A K M + + V Y+SL+ + G + L + +M+ + Y+ +
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513
Query: 226 ISSLVKLGEFEKAENI---------------YDEWESISGTGDPRVPNILLAAYINRNQL 270
I+ L K ++A+ + YD + + LL + + +
Sbjct: 514 INGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLM 573
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
A+ Y ++ + + + +L G+ ++G + K L K+ + + P+
Sbjct: 574 NEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQC--GFAPNSTSTI 631
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLI--IVERMQKD 387
+ L E+G + A+ ++ L N ++ E +L+ K G + + ++ M +D
Sbjct: 632 SLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARD 691
Query: 388 NV 389
+
Sbjct: 692 GL 693
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 125/278 (44%), Gaps = 4/278 (1%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
AR+ F E + + + PD S L+ Y + S EA ++ +M+ G + + + ++
Sbjct: 246 ARKVFDEMVKEGL-APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLI 304
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
++ G L++ +++E++ + + +T+ + + + A A E+++ +I
Sbjct: 305 HVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQ 364
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P + Y+ L + Y + ++A ++EME + + + V YS++LS Y G ++
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL 424
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++M+ + Y+ +I L + A ++ S+ D L+ +
Sbjct: 425 NQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCK 484
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+E A S ++ +V G+ P T+ +L G K +
Sbjct: 485 EGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 22/274 (8%)
Query: 32 ENFFEN--LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
+ EN LPD + T S+L+ + K+ +A L + M G + Y +++
Sbjct: 426 QQMLENGVLPDAI----TYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G +++ + E+ K PDVVTY++ + + + A++ +L + P
Sbjct: 482 HCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPA 541
Query: 149 WISYSTLTSLYIKMELPEKAA--------TTLKEMEK-------RTCRKNRVAYSSLLSL 193
I Y L EL A + E +K R + YS L+
Sbjct: 542 NIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHG 601
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
+ G + L K+M+ N +I L + G +A+ + + + D
Sbjct: 602 HCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLAD 661
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L+ + ++ + + G+ P
Sbjct: 662 AEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 153/354 (43%), Gaps = 17/354 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNL 89
+P+ PDT S +L S ++ +S A L+ M + P + YN +++
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G++ K + E+ ++ PDVVTY+ ++ A + AE ++ +PD
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++Y+ + Y + ++ A +EM +R + +S +S G E +
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M + K + Y+ ++ G N+++ E D V NIL+ AY R
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
++ A + ++ +G+ P T+ + + + G++ ++ F + I K PD
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLK--PD--- 471
Query: 329 ITAAYNKLEE----QGDIDGAEHLLVTLRNAG--HVSTEIYNSLLRTYAKAGKM 376
T YN L + G++ A+ L+ + + G +T +NS++ + K G++
Sbjct: 472 -TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRV 524
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 127/276 (46%), Gaps = 4/276 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD TC++ + S ++ KS EA + M+ G + Y+ +L+ Y + G + + +
Sbjct: 330 PDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNL 389
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ N D YN+ + A + + A F ++++ + PD +Y T+ + + +
Sbjct: 390 FNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSR 449
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL-FAKMNDA 220
M A +M + + + Y+SL+ + G + + +MMS + N
Sbjct: 450 MGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTV 509
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+ +I+SL K G +A++I+D I D N L+ Y ++E A + +
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
++ GI+P T+ L GY + G+++ L F++ +
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREML 605
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 8/296 (2%)
Query: 106 LKKNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
LK DV+ N+ L C ++ + + + ++PD ISYST+ +
Sbjct: 146 LKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSR 205
Query: 165 PEKAATTLKEMEKRT--CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++A L M K++ C N V+Y++++ + G + ++ +MM + Y
Sbjct: 206 SQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTY 265
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ I +L K +KAE + + S D N ++ Y Q + + +
Sbjct: 266 SSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR 325
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+G+ P T K G+ ++ E F K PD + + +G +
Sbjct: 326 RGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHK--PDLVTYSVLLHGYAAEGYV 383
Query: 343 DGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
+L ++ G V+ +YN L+ Y K G M ++I +MQ+ V DA T
Sbjct: 384 VDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWT 439
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 141/348 (40%), Gaps = 7/348 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + ++ PD T ++ ++ + + A+A +M G + YN ++ +
Sbjct: 424 IFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFC 483
Query: 92 SNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+G L K +++ E+ + P+ V +N + + + A+ F + PD
Sbjct: 484 MHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDV 543
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I++++L Y + EKA L M + V YS+LL Y G D+ L ++++
Sbjct: 544 ITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFRE 603
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+S K Y ++ L G A+ + E T D I+L N
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A + + +L +K + K + E+ E F S VP+
Sbjct: 664 DDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI--SATGLVPNASTY 721
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
L ++G ++ A+++ + +G S+ + N+++R + G++
Sbjct: 722 GVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEI 769
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 136/277 (49%), Gaps = 7/277 (2%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + ++++ Y + K EA L+++M+E G L + Y+ +L++Y+ N + + +
Sbjct: 126 PDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSV 185
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+K+ N + D+ T N+ + + + A++ F L+K I+P+ +SY+T+ +Y +
Sbjct: 186 FAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE 245
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
EL +A + M+++ +N V Y++++ +Y ++ + ++M S + N
Sbjct: 246 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAIT 305
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +IS K G+ ++A ++ + S D + ++ AY + A+ + L
Sbjct: 306 YSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK 365
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
P T +L K G+ E+ F++A S
Sbjct: 366 LPDNIPRETAITILA----KAGRTEEATWVFRQAFES 398
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 144/332 (43%), Gaps = 8/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ +L + ++ K+ A L ++M + Y+ ++ + G D LQ++++
Sbjct: 27 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 86
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ S D+V Y+ + D A F LK++ I PD ++Y+++ ++Y K +L +
Sbjct: 87 DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 146
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +KEM + N V+YS+LLS+Y E L ++ +M + ++ +I
Sbjct: 147 ARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID 206
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGI 285
+L ++A+ ++ W +P V N +L Y A + + K I
Sbjct: 207 VYGQLDMVKEADRLF--WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDI 264
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ T+ + Y K + EK ++ R P+ + + + G +D A
Sbjct: 265 EQNVVTYNTMIKIYGKTMEHEKATNLVQEM--QSRGIEPNAITYSTIISIWGKAGKLDRA 322
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
L LR++G + +Y +++ Y + G M
Sbjct: 323 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM 354
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 140/324 (43%), Gaps = 28/324 (8%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN---GQLDKVPQML 103
TC+ ++ Y Q EA+ L + + + YN +L +Y G+ + +++
Sbjct: 200 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 259
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q +K+ +VVTYN + + E A E++ I+P+ I+YST+ S++ K
Sbjct: 260 Q--RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 317
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++AAT +++ ++V Y +++ Y +G K+++ ++
Sbjct: 318 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA----KRLLHELKLPDNIPRE 373
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ--LEMAESFYNRLV 281
I+ L K G E+A ++ + D V ++ Y +RNQ + + E F ++
Sbjct: 374 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLY-SRNQRYVNVIEVF-EKMR 431
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA--------------IGSVRKWVPDHR 327
T G P ++ Y K+ + EK +++ + S+ D
Sbjct: 432 TAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFE 491
Query: 328 LITAAYNKLEEQGDIDGAE-HLLV 350
++ + + +LE +++ E HL+V
Sbjct: 492 MVESLFQRLESDPNVNSKELHLVV 515
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 140/321 (43%), Gaps = 42/321 (13%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+P V YN+ L + A F E+++ + PD +YSTL + + K + + A +
Sbjct: 20 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 79
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK---------------MMSLFA 215
L++ME+ + V YS+L+ L + + + I+ + M++++
Sbjct: 80 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 139
Query: 216 K-------------MNDA-------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
K MN+A Y+ ++S V+ +F +A +++ E + ++ D
Sbjct: 140 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 199
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK-K 314
NI++ Y + ++ A+ + L I+P ++ + Y + + + F+
Sbjct: 200 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 259
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
+ + V + + Y K E + A +L+ +++ G I Y++++ + KA
Sbjct: 260 QRKDIEQNVVTYNTMIKIYGKTMEH---EKATNLVQEMQSRGIEPNAITYSTIISIWGKA 316
Query: 374 GKM--PLIIVERMQKDNVQMD 392
GK+ + ++++ V++D
Sbjct: 317 GKLDRAATLFQKLRSSGVEID 337
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 136/277 (49%), Gaps = 7/277 (2%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD + ++++ Y + K EA L+++M+E G L + Y+ +L++Y+ N + + +
Sbjct: 258 PDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSV 317
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+K+ N + D+ T N+ + + + A++ F L+K I+P+ +SY+T+ +Y +
Sbjct: 318 FAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE 377
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
EL +A + M+++ +N V Y++++ +Y ++ + ++M S + N
Sbjct: 378 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAIT 437
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +IS K G+ ++A ++ + S D + ++ AY + A+ + L
Sbjct: 438 YSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK 497
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
P T +L K G+ E+ F++A S
Sbjct: 498 LPDNIPRETAITILA----KAGRTEEATWVFRQAFES 530
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 144/332 (43%), Gaps = 8/332 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ +L + ++ K+ A L ++M + Y+ ++ + G D LQ++++
Sbjct: 159 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 218
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ S D+V Y+ + D A F LK++ I PD ++Y+++ ++Y K +L +
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 278
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +KEM + N V+YS+LLS+Y E L ++ +M + ++ +I
Sbjct: 279 ARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID 338
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGI 285
+L ++A+ ++ W +P V N +L Y A + + K I
Sbjct: 339 VYGQLDMVKEADRLF--WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDI 396
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ T+ + Y K + EK ++ R P+ + + + G +D A
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEM--QSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
L LR++G + +Y +++ Y + G M
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM 486
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 140/324 (43%), Gaps = 28/324 (8%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN---GQLDKVPQML 103
TC+ ++ Y Q EA+ L + + + YN +L +Y G+ + +++
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q +K+ +VVTYN + + E A E++ I+P+ I+YST+ S++ K
Sbjct: 392 Q--RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++AAT +++ ++V Y +++ Y +G K+++ ++
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA----KRLLHELKLPDNIPRE 505
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ--LEMAESFYNRLV 281
I+ L K G E+A ++ + D V ++ Y +RNQ + + E F ++
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLY-SRNQRYVNVIEVF-EKMR 563
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK--------------AIGSVRKWVPDHR 327
T G P ++ Y K+ + EK +++ + S+ D
Sbjct: 564 TAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFE 623
Query: 328 LITAAYNKLEEQGDIDGAE-HLLV 350
++ + + +LE +++ E HL+V
Sbjct: 624 MVESLFQRLESDPNVNSKELHLVV 647
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 140/321 (43%), Gaps = 42/321 (13%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+P V YN+ L + A F E+++ + PD +YSTL + + K + + A +
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK---------------MMSLFA 215
L++ME+ + V YS+L+ L + + + I+ + M++++
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 216 K-------------MNDA-------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
K MN+A Y+ ++S V+ +F +A +++ E + ++ D
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK-K 314
NI++ Y + ++ A+ + L I+P ++ + Y + + + F+
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
+ + V + + Y K E + A +L+ +++ G I Y++++ + KA
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEH---EKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 374 GKM--PLIIVERMQKDNVQMD 392
GK+ + ++++ V++D
Sbjct: 449 GKLDRAATLFQKLRSSGVEID 469
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 138/303 (45%), Gaps = 11/303 (3%)
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
LQ L+ P+ TY L + A E AE F+E+K + + Y++ + +K
Sbjct: 186 LQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKG 245
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
P KA M++ C+ + Y+ L++LY G L+++ +M+S K N Y
Sbjct: 246 GNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTY 305
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
T ++++ + G EKAE ++++ + D N L+ AY A ++ +
Sbjct: 306 TALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQH 365
Query: 283 KGIKPCYTTWELLTWGYLKKGQM---EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
G +P ++ +L Y + G + E V E K+ + + H ++ +A++K
Sbjct: 366 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRV--GITPTMKSHMVLLSAFSK---T 420
Query: 340 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQ 396
G++ E +L + +G + T + NS+L Y + G+ + ++ M+ + + D T
Sbjct: 421 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 480
Query: 397 KVL 399
+L
Sbjct: 481 NIL 483
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 137/308 (44%), Gaps = 9/308 (2%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
DT + L+ +Y + +AEA+ +M G + YN +N + G +K ++
Sbjct: 198 DTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLR 257
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ P TY + + A K F E+ K P+ +Y+ L + + + L
Sbjct: 258 MKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGL 317
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA ++M++ + +Y++L+ Y+ G+ I+ M + + + A Y
Sbjct: 318 CEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 377
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + + G AE ++++ + + T + +LL+A+ + E N++ G
Sbjct: 378 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 437
Query: 285 IK-PCYTTWELLT-WGYLKK-GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+K + +L +G L + G+ME+VL + GS + + ++ N+ + G
Sbjct: 438 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN--GSCEADISTYNILI---NRYGQAGF 492
Query: 342 IDGAEHLL 349
ID E L
Sbjct: 493 IDKMEGLF 500
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 6/327 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
L+ ++ Q EAE+ ++ E + Y ++ Y +G L+K + E+K
Sbjct: 168 LIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYG 227
Query: 111 SP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P V YN ++ + AE+ FL +K+ P +Y+ L +LY K A
Sbjct: 228 LPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMAL 287
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
EM C+ N Y++L++ + G ++ ++++M + + Y ++ +
Sbjct: 288 KVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAY 347
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G A I+ + + D NIL+ AY L AE+ + + GI P
Sbjct: 348 SRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTM 407
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ +L + K G + K + + S K D ++ + N G E +L
Sbjct: 408 KSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKL--DTFVLNSMLNLYGRLGQFGKMEEVL 465
Query: 350 VTLRNAGHVSTEI--YNSLLRTYAKAG 374
+ N G +I YN L+ Y +AG
Sbjct: 466 TVMEN-GSCEADISTYNILINRYGQAG 491
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L++ + + EA +L++++ G+ + YN +++ GQ++ +L+ +
Sbjct: 151 TFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
KK PDVVTYN + + + ++ + I PD I++S L +Y K
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM +R+ N V Y+SL++ G DE ++ ++S N Y +
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ K + I GD N L Y + AE R+V+ G+
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
P T+ +L G G++ K L
Sbjct: 391 HPDMYTFNILLDGLCDHGKIGKAL 414
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 5/291 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P +V ++ L A A N E F L+ I D S++TL + + A +
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L +M K + V + SL++ + ++ E + + +++ L + N Y +I SL +
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G+ A ++ + + D N L+ + ++ + ++ GI P T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L Y K+GQ+ + + + + I R P+ + N L G +D A+ +L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQ--RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 352 LRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
L + G + YN+L+ Y KA ++ + I+ M +D V D T L
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 103/249 (41%), Gaps = 1/249 (0%)
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACA 125
++ M G + ++ ++++Y GQL + + E ++++ +P++VTYN +
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ A+K L P+ ++Y+TL + Y K + + L M + +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 186 AYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
Y++L Y G ++ +M+S + + ++ L G+ KA ++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 246 ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ NI++ +++E A + L KG+ P T+ + G +K
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 306 EKVLECFKK 314
+ E ++K
Sbjct: 481 REAHELYRK 489
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L Y Q K + AE ++ +M CG +N +L+ +G++ K L++L
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K+ T ++TYN+ + + E A F L + PD I+Y T+ + L
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 166 EKAATTLKEMEK 177
+A ++M+K
Sbjct: 481 REAHELYRKMQK 492
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 153/382 (40%), Gaps = 40/382 (10%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F+N + PD T S L++ + + + +A L+++M + G + YN ++
Sbjct: 19 DLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGL 78
Query: 91 ISNGQLDKVPQMLQELKKNTSPDVVTYNLWL---------------------AACASQ-- 127
NG++D ++++++ +P V+TY + + A CA
Sbjct: 79 CDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVV 138
Query: 128 ------------NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
+ + A F ++ + PD +Y+ L Y K E P+ A L+EM
Sbjct: 139 TYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 198
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
K C N + Y++L+ G + + + M+ K + + +I K+G+
Sbjct: 199 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 258
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ A ++ D NI+++ N+++ A R+ G P T+ +
Sbjct: 259 DLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 318
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL-RN 354
G K Q+++ E ++ + + D + + L + +D AE LL + RN
Sbjct: 319 VSGLCKASQVDEAYEVYE--VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERN 376
Query: 355 AGHVSTEIYNSLLRTYAKAGKM 376
Y L+ + KA ++
Sbjct: 377 GSAPDVVAYTILIHGFCKADQL 398
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 114/265 (43%), Gaps = 3/265 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + + PD T + L+ Y + ++ + L+++M + G + YN +++ +
Sbjct: 159 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 218
Query: 92 SNGQ-LDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+G+ +D L+++ P T+NL + + A + F + PD
Sbjct: 219 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 278
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + S + + A L+ M + C + V Y+S++S DE +++ +
Sbjct: 279 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 338
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ ++ + +I L K + AE + E E D IL+ + +QL
Sbjct: 339 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 398
Query: 271 EMAESFYNRLVTKGIKPCYTTWELL 295
+ + +F++ ++ KG P T+ ++
Sbjct: 399 DKSLAFFSEMLDKGCVPTVITYSIV 423
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 64 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLA 122
A L + M++ G L YN M++ ++D Q+L+ + + PDVVTYN ++
Sbjct: 261 AYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVS 320
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ + A + + L+ D ++ STL K + A L+EME+
Sbjct: 321 GLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 380
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ VAY+ L+ + D+ L + +M+ Y+ VI L K
Sbjct: 381 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 169/391 (43%), Gaps = 53/391 (13%)
Query: 16 YRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECG 75
+ +R+++A AL + E ++ PD + T + L+H + K++EA AL+++M G
Sbjct: 163 HGKRISEAVALVDQMVEMGYK--PDTV----TFNTLIHGLFLHNKASEAVALIDRMVARG 216
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAE 134
Y ++N G +D +L++++K +VV YN + + A
Sbjct: 217 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAF 276
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
F +++ I PD +Y++L S A+ L +M +R N V ++SL
Sbjct: 277 DLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSL---- 332
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
I + K G+ +AE ++DE I + DP
Sbjct: 333 -------------------------------IDAFAKEGKLIEAEKLFDEM--IQRSIDP 359
Query: 255 RVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ N L+ + ++L+ A+ + +V+K P T+ L G+ K ++E+ +E F
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTY 370
++ S R V + L + GD D A+ + + + G V +I Y+ LL
Sbjct: 420 REM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGL 476
Query: 371 AKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
K GK+ L++ E +QK ++ + T ++
Sbjct: 477 CKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 148/328 (45%), Gaps = 4/328 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ ++ + K +A L KM G YN +++ + G+ ++L + ++
Sbjct: 260 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +P+VVT+N + A A + AEK F E+ + IDP+ ++Y++L + + + ++
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A M + C + V Y++L+ + +E + ++++M N Y +I
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L + G+ + A+ I+ + S D +ILL +LE A + L ++P
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ ++ G K G++E + F S++ P+ + T + +G + A+
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSL--SLKGVKPNVIIYTTMISGFCRKGLKEEADA 557
Query: 348 LLVTLRNAGHV-STEIYNSLLRTYAKAG 374
L ++ G + + YN+L+R + G
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRARLRDG 585
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 11/261 (4%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ +AQ + T + LPD + T + L+ + + K+ E L +MS+ G
Sbjct: 374 HDRLDEAQQIFTLMVSK--DCLPDVV----TYNTLIKGFCKAKRVEEGMELFREMSQRGL 427
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 135
+ + YN ++ G D ++ +++ PD++TY++ L E A
Sbjct: 428 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 487
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
F L+K+K++P+ +Y+ + K E + + + N + Y++++S +
Sbjct: 488 VFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 547
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G K+E ++++M + Y +I + ++ G+ + + E S GD
Sbjct: 548 RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 607
Query: 256 ----VPNILLAAYINRNQLEM 272
V N+L + ++ LEM
Sbjct: 608 TISMVINMLHDGRLEKSYLEM 628
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 113/294 (38%), Gaps = 36/294 (12%)
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
+ A F E+ K++ P I +S L S KM + + ++M+ N YS L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
L+ + L + KMM L + + + +++ +A + D+ +
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D N L+ N+ A + +R+V +G +P T+ + G K+G ++ L
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242
Query: 311 CFKKA-IGSVRKWVPDHRLITAA-------------YNKLEEQG---DIDGAEHLLVTLR 353
KK G + V + I +NK+E +G D+ L+ L
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302
Query: 354 NAGHVSTE-----------------IYNSLLRTYAKAGKMPLIIVERMQKDNVQ 390
N G S +NSL+ +AK GK LI E++ + +Q
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK--LIEAEKLFDEMIQ 354
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 119/318 (37%), Gaps = 39/318 (12%)
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+S +LD + E+ K+ P ++ ++ L+A A N + +++ I +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN------------- 196
+YS L + + + A L +M K + V SSLL+ Y +
Sbjct: 117 YTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 176
Query: 197 ---MGYKDEVLRIWKKMMSLFAKMNDAE-------------------YTCVISSLVKLGE 234
MGYK + + + LF +E Y V++ L K G+
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 294
+ A ++ + E + + N ++ ++ A +N++ TKGIKP T+
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLR 353
L G+ I RK P+ + + ++G + AE L ++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIE--RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354
Query: 354 NAGHVSTEIYNSLLRTYA 371
+ + YNSL+ +
Sbjct: 355 RSIDPNIVTYNSLINGFC 372
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L++ V+ +++ +A L+ M E G+ Y+ +++ G+ ++ + +++
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P++V Y++ + + A++ + + P+ +YS+L + K L
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC 448
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A KEM+K C +N+ YS L+ +G E + +W KM+++ K + Y+ +
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 226 ISSLVKLGEFEKAENIYDEW---ESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
I L +G + A +Y E E D NILL + + A N ++
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 283 KGIKP 287
+G P
Sbjct: 569 RGCDP 573
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 147/361 (40%), Gaps = 39/361 (10%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
F +P++ PD T L+ + ++ EA L+++M G P+ YN +++
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G L +V +++ + K P+ VTYN + + + A + +K P+ ++
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y TL + +K A L ME+R N+ YS L+S G +E + +W+KM
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE--------------------------- 244
K N Y+ ++ L + G+ +A+ I +
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 245 -----WESISGTGDPR---VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
W+ + TG R ++L+ +++ A +++++T GIKP + +
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 297 WGYLKKGQMEKVLECFKKAIGSVR-KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
G G M+ L+ + + + K PD + L Q DI A LL ++ +
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 356 G 356
G
Sbjct: 570 G 570
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 133/301 (44%), Gaps = 14/301 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQ-----ELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
+N +LN+ I+ G + + + N SP+ +++NL + A + A + F
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
+ + K PD +Y TL K E ++A L EM+ C + V Y+ L+ +
Sbjct: 211 RGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID---GL 267
Query: 198 GYKDEVLRIWKKMMSLFAKM---NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
K ++ R+ K + ++F K N+ Y +I L G+ +KA ++ + S +
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
L+ + + + A + + +G + +L G K+G+ E+ + ++K
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKA 373
+ + P+ + + + L +G + A+ +L + +G + + Y+SL++ + K
Sbjct: 388 M--AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 445
Query: 374 G 374
G
Sbjct: 446 G 446
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-- 106
S L+ + EA + KM G + Y+ ++ G +D ++ E+
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 107 --KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST-LTSLYIKME 163
+ + PDVVTYN+ L Q D A + DPD I+ +T L +L K
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 164 LPEKAATTLKEMEKRTCRKNRVA 186
+K + L+E+ R ++ RV+
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVS 613
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 143/346 (41%), Gaps = 6/346 (1%)
Query: 8 GAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEA 64
G Q+ SYR + + +T+A L PD + ++HS +NK +A
Sbjct: 163 GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDA 222
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAA 123
L +M G + YN ++ + G L + +L E+K KN +PDV T+N + A
Sbjct: 223 CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
+ + A+ + K I PD ++Y++L Y + + A M + N
Sbjct: 283 LGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
Y++++ DE + ++++M + YT +I L K E+A +
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
+ + D ILL A +LE A+ F+ RL+ KG T+ ++ G K
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462
Query: 304 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ ++ K G + +PD L E+ + D AE +L
Sbjct: 463 LFGEAMDLKSKMEG--KGCMPDAITFKTIICALFEKDENDKAEKIL 506
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 148/357 (41%), Gaps = 42/357 (11%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + K PD T ++L+ +N A AL +KM E G Y +L+
Sbjct: 364 SLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 423
Query: 91 ISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWL-AACASQNDKETAE-KAFLELKKTKIDP 147
G+L+ + Q L K +V TYN+ + C + E + K+ +E K P
Sbjct: 424 CKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM--P 481
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR----------------------- 184
D I++ T+ + + +KA L+EM R ++ R
Sbjct: 482 DAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDV 541
Query: 185 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
V Y +L+ Y + ++ M + N YT +I L K ++A ++++E
Sbjct: 542 VTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEE 601
Query: 245 WESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 299
+ + PNI L+ A + LE A + + GI+P ++ +L G
Sbjct: 602 MKHKN-----MFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656
Query: 300 LKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
K G++E E F++ + V+ + + ++ TA N+L + G D A L + + G
Sbjct: 657 CKSGRLEGAKEIFQRLL--VKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKG 711
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 5/261 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P +N L++ + T F + + PD + + L + + + A +
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L + KR N + ++L+ G + L ++++ ++N Y +I+ L K
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
GE + + + E S D + N ++ + L A Y+ ++ KGI P T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L +G+ G +++ + ++ PD + L ++G + A+ +L
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEM--KLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAV 298
Query: 352 LRNAGHVSTEI--YNSLLRTY 370
+ A + ++ YNSL+ Y
Sbjct: 299 MMKAC-IKPDVVTYNSLIDGY 318
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 83/177 (46%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+P+V Y + + + + A F E+K + P+ ++Y++L K E+A
Sbjct: 571 GVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERA 630
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
LKEM++ + + +Y+ LL G + I+++++ +N YT +I+
Sbjct: 631 IALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINE 690
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
L K G F++A ++ + E D +I++ A +++ + AE ++ +G+
Sbjct: 691 LCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 121/301 (40%), Gaps = 4/301 (1%)
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETA 133
GF + Y ++N G+ V ++L++L+ ++ PDVV YN + + A
Sbjct: 163 GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDA 222
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
+ E+ I P+ ++Y+ L + M ++A + L EM+ + + +++L+
Sbjct: 223 CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G + MM K + Y +I L + + A+ ++ T +
Sbjct: 283 LGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
R ++ ++ A S + + K + P T+ L G K +E+ + K
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
K + PD T + L + G ++ A+ L G H++ + YN ++ K
Sbjct: 403 KM--KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460
Query: 373 A 373
A
Sbjct: 461 A 461
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD C+ L+ + + K A+ ++ M + + YN +++ Y ++ +
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYV 330
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + +P+V TY + + + A F E+K + PD ++Y++L K
Sbjct: 331 FYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK 390
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+A K+M+++ + + +Y+ LL G + +++++ +N
Sbjct: 391 NHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQT 450
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I+ L K F +A ++ + E D ++ A +++ + AE ++
Sbjct: 451 YNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMI 510
Query: 282 TKGIK 286
+G++
Sbjct: 511 ARGLQ 515
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+ S + K+ EA L ++M E G Y +++++Y G+++ +L++
Sbjct: 121 TYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKM 180
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L KN +PD T N + A + E A + F +KK+ + + +S++ + K
Sbjct: 181 LDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKV 240
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A + EME R + N + +++L++ Y E ++ ++M S + YTC+
Sbjct: 241 GLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCM 300
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + K G KA ++ + E + + N+L+ A + + + A Y + KGI
Sbjct: 301 IEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGI 360
Query: 286 KPCYTTWELL 295
P T +L
Sbjct: 361 LPDAITATVL 370
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 135/320 (42%), Gaps = 19/320 (5%)
Query: 88 NLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
N+ ++ LDK+ +K PD + YN+ L N + A K F +K
Sbjct: 64 NVVLAMDFLDKM------IKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPA 117
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +Y+ L + + E+A EME+R C + AY++++ +Y G + + +
Sbjct: 118 DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVL 177
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-NILLAAYIN 266
KKM+ +D +I+++ + G E A I++ + SG V N +L
Sbjct: 178 KKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKK-SGVAVNTVSFNAMLDCCGK 236
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELL--TWGYLK-KGQMEKVLECFKKAIGSVRKWV 323
++ +A F + + +GIKP T+ L G K + KVL+ + A
Sbjct: 237 AGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSA-----GLT 291
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLII 380
PD T + G++ A + + AG + + YN L+ KAG+ I
Sbjct: 292 PDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDI 351
Query: 381 VERMQKDNVQMDAETQKVLK 400
M+K + DA T VL+
Sbjct: 352 YFDMKKKGILPDAITATVLQ 371
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
Query: 1 MERRRPHGAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQ 57
ER + G V S+ + +A + F + + + P+ T + L++ +
Sbjct: 212 FERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGR 271
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVT 116
K ++EA ++++M G Y M+ + G + K +M +++K S +VVT
Sbjct: 272 AKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVT 331
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
YNL + A + A + ++KK I PD I+ + L L K +L + +L E E
Sbjct: 332 YNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKL---SGISLDENE 388
Query: 177 KR 178
+R
Sbjct: 389 QR 390
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 121/270 (44%), Gaps = 7/270 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ----MLQ 104
+AL+ SY + K AEA+ +M G + Y +L ++ + + + +L
Sbjct: 178 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLD 237
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
E K PD Y++ + + + A K F + + ++Y++L S +
Sbjct: 238 EKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYK- 296
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ + +M++ + + V+Y+ L+ Y ++E L ++++M+ + Y
Sbjct: 297 --EVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + G E+A+ ++ D +L+AY+N + +E AE F+ R+ G
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+P T+ + GY K +EK++E ++K
Sbjct: 415 FEPNIVTYGTMIKGYAKANDVEKMMEVYEK 444
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 19/309 (6%)
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDK 130
SE FL Y + N NG ++V +L K +SP+V++Y + +
Sbjct: 137 FSEMDFLMLITAYGKLGNF---NGA-ERVLSVLS--KMGSSPNVISYTALMESYGRGGKC 190
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYI---KMELPEKAATTLKEMEKRTCRKNRVAY 187
AE F ++ + +P ++Y + ++ K + E+ TL + +K + ++ Y
Sbjct: 191 NNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 250
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
++ +Y G D+ +++ M+ + Y ++S E K IYD+ +
Sbjct: 251 HMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEVSK---IYDQMQR 307
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D +L+ AY + E A S + ++ G++P + + +L + G +E+
Sbjct: 308 SGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 308 VLECFKKAIGSVR--KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
FK S+R + PD T + D++GAE ++ G + Y
Sbjct: 368 AKTVFK----SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 365 SLLRTYAKA 373
++++ YAKA
Sbjct: 424 TMIKGYAKA 432
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNT 110
L S+ N K E + ++M G + Y ++ Y + ++ + +E L
Sbjct: 288 LMSFETNYK--EVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
P YN+ L A A E A+ F +++ +I PD SY+T+ S Y+ E A
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
K ++ N V Y +++ Y ++++ +++KM K N T ++ +
Sbjct: 406 FFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 465
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
+ +F A Y E ES D + N+LL+ Y +++L+ A+
Sbjct: 466 RCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYSTQDELDEAK 509
>gi|414883803|tpg|DAA59817.1| TPA: hypothetical protein ZEAMMB73_625576 [Zea mays]
Length = 350
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
L+ K++ +A + + +M E G+ YN ++ + + + ++L + N
Sbjct: 70 LIKGLCDGKRTGDAMDMVFRRMPELGYTPDVFSYNALIKGLCAEKKSQEALELLLHMTAN 129
Query: 110 ----TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
SPDVV+YN+ + + + + A F E+ PD ++YS++ K +
Sbjct: 130 GGYNCSPDVVSYNIVIDGLFKEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCKAQAM 189
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA +L++M + N Y+SL+ Y ++G E +R+ KKM ++N Y +
Sbjct: 190 DKAEASLQQMLYKGVMPNTRPYNSLIHGYCSLGQLVEAVRLLKKMSGGGLQLNVVTYNML 249
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K+G +A +I+D + LL Y + L + ++ GI
Sbjct: 250 IDYYCKIGRCAEARSIFDSMVRRGQKPNATTYCSLLHGYATKGALVDMHDLLDLMIRDGI 309
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECF 312
+ + +L + Y K ++K + F
Sbjct: 310 PIEHRVFNILIYAYAKHETVDKAMAVF 336
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 113/295 (38%), Gaps = 47/295 (15%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
+VV L C + + + F + + PD SY+ L IK EK
Sbjct: 64 NVVLNQLIKGLCDGKRTGDAMDMVFRRMPELGYTPDVFSYNAL----IKGLCAEK----- 114
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
K++ A LL + N GY + Y VI L K
Sbjct: 115 ---------KSQEALELLLHMTANGGYN--------------CSPDVVSYNIVIDGLFKE 151
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNIL-----LAAYINRNQLEMAESFYNRLVTKGIKP 287
GE +KA ++ E + G G P P+++ + ++ AE+ +++ KG+ P
Sbjct: 152 GEVDKAYFLFHE---MPGQGFP--PDLVTYSSVIDGLCKAQAMDKAEASLQQMLYKGVMP 206
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKK-AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+ L GY GQ+ + + KK + G ++ V + ++ Y K+ +
Sbjct: 207 NTRPYNSLIHGYCSLGQLVEAVRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSIF 266
Query: 347 HLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
+V R + Y SLL YA G + + +++ M +D + ++ +L
Sbjct: 267 DSMV--RRGQKPNATTYCSLLHGYATKGALVDMHDLLDLMIRDGIPIEHRVFNIL 319
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
++L+H Y + EA L++KMS G + YN +++ Y G+ + + + +
Sbjct: 212 NSLIHGYCSLGQLVEAVRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSIFDSMVR 271
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ TY L A++ + + I + ++ L Y K E +K
Sbjct: 272 RGQKPNATTYCSLLHGYATKGALVDMHDLLDLMIRDGIPIEHRVFNILIYAYAKHETVDK 331
Query: 168 AATTLKEMEKRTCRKNRVA 186
A EM + R N V+
Sbjct: 332 AMAVFAEMRQNGLRPNLVS 350
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F +P + PD T S+++ + + +AEA +++M G + PYN +++ Y
Sbjct: 160 LFHEMPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQMLYKGVMPNTRPYNSLIHGYC 219
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S GQL + ++L+++ +VVTYN+ + A F + + P+
Sbjct: 220 SLGQLVEAVRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSIFDSMVRRGQKPNAT 279
Query: 151 SYSTLTSLY 159
+Y +L Y
Sbjct: 280 TYCSLLHGY 288
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 44/339 (12%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV +A +L + E +P+K+ T + L+ + + +EA + E M+E G
Sbjct: 130 RVNEATSLFKQMVER--NVIPNKV----TFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
YN +++ Y S Q+D+ ++ + +K +P+V +YN+ + + A+
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 197
E+ + PD +YSTL + ++ P++A LKEM N + YS +L
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 198 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
G+ DE + K M + N YT +I + G
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFG------------------------ 339
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
+LE A ++ L KGI+P T+ ++ G LK G + E F++
Sbjct: 340 -----------KLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREM-- 386
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+V +P+ GD A L+ + G
Sbjct: 387 AVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG 425
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N +L+ S ++ ++ E+ K PDV+TY+ + + A + +++
Sbjct: 13 FNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKME 72
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P+ ++Y+T+ K L +A EM K + YSS+L + N+G +
Sbjct: 73 EKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVN 132
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E ++K+M+ N +T +I L K +A +++ D N L+
Sbjct: 133 EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALV 192
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
Y +R+Q++ A+ +N + KG P ++ +L G+ K G++++
Sbjct: 193 DGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 135/334 (40%), Gaps = 6/334 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S +++ + + A L++KM E G + YN +++ + + +
Sbjct: 43 PDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDF 102
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E+ K+ PDV TY+ L + A F ++ + + P+ ++++ L K
Sbjct: 103 FSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCK 162
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ +A + M ++ + Y++L+ Y + DE +++ M N
Sbjct: 163 KRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRS 222
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I+ K G ++A+ + E S T D + L+ + + + A+ +
Sbjct: 223 YNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMC 282
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+ G+ P T+ ++ G K G +++ E K S K P+ + T + G
Sbjct: 283 SYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQES--KIEPNIFIYTILIEGMCTFGK 340
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
++ A L L G T + Y ++ K G
Sbjct: 341 LEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 118/268 (44%), Gaps = 4/268 (1%)
Query: 47 TCSALLHSYVQNKKSA---EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
T ++L+ Y + + + L+++M E G + + ++N Y N ++
Sbjct: 228 TYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVF 287
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+E+K+ + VVTYN ++ S+ E K E++ + P+ I++ + + K
Sbjct: 288 EEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ A + M +R + V Y+ L+ +Y +G ++ + + + M N Y
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
C+I+ + G++ A + DE + D N+L+ A + ++ A + +
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLE 310
G++P + T+ + G+ KG ++ E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/301 (18%), Positives = 117/301 (38%), Gaps = 36/301 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L++ Y +N +A A + E+M + G + YN +++ S G++++ ++++E+
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
Query: 107 K------------------------------------KNTSPDVVTYNLWLAACASQNDK 130
+ +N PDVV YN+ +
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 385
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A + K I P+ +Y+ L + + + A+ L EM+++ + V Y+ L
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ G + +++ +M + + N Y +I G + A I E
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ N+ + + +++ A N ++ K + P T+E + G ++KG +
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
Query: 311 C 311
C
Sbjct: 566 C 566
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 127/348 (36%), Gaps = 82/348 (23%)
Query: 106 LKKNTSPDVVTYNLWLAA-CASQNDKETAEKA---------------------------- 136
L++ SPD+ T+N ++ C ++ + A
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242
Query: 137 ---------FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
E+ + I P +++ L + Y K A +EM+++ + V Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+SL+S + G +E +++ ++M L N+ + CV+ K G A + D
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ--- 304
+ D + NIL+ Y ++E A + + KGI P TT+ L G+ + G
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422
Query: 305 --------MEKVLE-------------CFKKAIGSVRKWV------------PDHRLITA 331
EK +E C K G VRK V P+H
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCK---GEVRKAVKLLDEMSEVGLEPNHLTYNT 479
Query: 332 AYNKLEEQGDIDGAEHLLVTL---RNAGHVSTEIYNSLLRTYAKAGKM 376
++G+I A + + R +V T YN ++ + + GKM
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT--YNVFIKYFCQIGKM 525
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 118/296 (39%), Gaps = 12/296 (4%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + N LA + AEKAF + ++ PD +++T+ S ++ KA
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI---WKKMMSLFAKMNDAEYTCVISS 228
K+++ + Y+SL+ Y G + + K+M+ + +I+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K A +++E + N L++ + ++E + G+ P
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGA 345
T+ + G+ KKG M + + R PD + ++ Y +L + D
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGM--TERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 346 EHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+ + + +V+T YN L+ ++++G + +++ M++ ++ D T VL
Sbjct: 392 KEAMAKKGISPNVTT--YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 5/269 (1%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYI----SNGQLDKVPQMLQE 105
LL +K++++A + ++ +M+E G + YN +L S L+ + M +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PDVV+Y + + D + A + E+ I PD ++Y+++ + K +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA L M K + + Y+S+L Y + G E + KKM S + + Y+ +
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K G +A I+D + LL Y + L + +V GI
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
P + + +L Y K+G++++ + F K
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 142/337 (42%), Gaps = 19/337 (5%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQMLQE-L 106
LL +S EA L+ M++ P + Y ++N + G DK E L
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ PDVVTYN +AA + A + + K + PD ++Y+++ Y P+
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A LK+M + V YS L+ G E +I+ M K Y ++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
G + + D D V +IL+ AY + +++ A ++++ +G+
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAI------GSVRKWVPDHRLITAAYNKLEEQG 340
P T+ + K G++E + F++ I G++ H L T NK E
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC--NKWER-- 459
Query: 341 DIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
AE L++ + + G ++T +NS++ ++ K G++
Sbjct: 460 ----AEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 134/311 (43%), Gaps = 3/311 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL-DKVPQMLQELK 107
S L+ +Y + K +A + KM + G + Y ++ + +G++ D + Q +
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SP + YN + + N E AE+ LE+ I + I ++++ + K +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ + M + + N + Y++L++ Y G DE +++ M+S+ K N Y+ +I+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K+ E A ++ E ES + D NI+L + A+ Y R+ G +
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+T+ ++ G K + L+ F+ + + R + L + G D A+
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNL--CLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 348 LLVTLRNAGHV 358
L V + G V
Sbjct: 673 LFVAFSSNGLV 683
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 119/274 (43%), Gaps = 5/274 (1%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD M T +++LH Y + + EA ++KM G + Y+ +++ NG+
Sbjct: 263 MPDCM----TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ ++ + K+ P++ TY L A++ + + I PD +S L
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
Y K ++A +M ++ N V Y +++ + G ++ + +++M+
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ Y +I L ++E+AE + E + N ++ ++ ++ +E
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ +V G+KP T+ L GY G+M++ ++
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 159/405 (39%), Gaps = 61/405 (15%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S +++ + + S +A + +M + G L + YN ++ +DK ++
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 103 LQELKKN-TSPDVVTYNLWLAA-CASQNDKETAEKAFL-ELKKTKIDPDWISYSTLTSLY 159
L + KN PD +TYN L C+S KE FL +++ ++PD ++YS L
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI--GFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------- 210
K +A M KR + Y +LL Y G E+ + M
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 211 -------------------MSLFAKM-------NDAEYTCVISSLVKLGEFEKA----EN 240
M +F+KM N Y VI L K G E A E
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+ DE S V N L+ N+ E AE ++ +GI + + +
Sbjct: 432 MIDEGLSPGNI----VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 301 KKGQM---EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG- 356
K+G++ EK+ E + IG + + LI N G +D A LL + + G
Sbjct: 488 KEGRVIESEKLFELMVR-IGVKPNVITYNTLI----NGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 357 HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+T Y++L+ Y K +M L++ + M+ V D T ++
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 122/282 (43%), Gaps = 3/282 (1%)
Query: 34 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE + D+ P ++L+H K AE L+ +M + G + +N +++ +
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++ + ++ + + + P+V+TYN + + A K + + P+ +
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+YSTL + Y K+ E A KEME + + Y+ +L ++ ++
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ + Y ++ L K + A ++ + + R NI++ A + +
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ A+ + + G+ P Y T+ L+ + +G +E++ + F
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/231 (16%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ Y K EA L+ M G + Y+ ++N Y +++ + +E+
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ + SPD++TYN+ L A++ ++ + ++ + +Y+ + K +L
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A + + + ++ ++ +G DE ++ S N Y +
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+++ G E+ + ++ E T D + N ++ + R ++ A ++
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 743
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 2/251 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T S L+ +N + EA L E+M S+ + PL YN ++N + G+ D+ +++
Sbjct: 311 TYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEF 370
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K N P+V Y+ + + A+ E+K + + PD I+Y++L + + +
Sbjct: 371 MKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQ 430
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A L EM++ C+ + V ++ +L G DE L + +K+ +N Y
Sbjct: 431 IDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRI 490
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
V++SL + E KA + S N LL A + LV G
Sbjct: 491 VLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMG 550
Query: 285 IKPCYTTWELL 295
+P + +WELL
Sbjct: 551 FQPQHDSWELL 561
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 23/270 (8%)
Query: 67 LMEKMSECGFLK-----------------CPLPYNHMLNLYISNGQLDKVPQMLQELKKN 109
LM+ S+CGF + P + LNL + + Q+D V ++L K++
Sbjct: 207 LMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRS 266
Query: 110 T--SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID-PDWISYSTLTSLYIKMELPE 166
P+V +N+ + + D ++A + E++ +K P+ I+YSTL + +
Sbjct: 267 LVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLK 326
Query: 167 KAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +EM K + + Y+ L++ + G D + + M + N Y+ +
Sbjct: 327 EAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSAL 386
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN-QLEMAESFYNRLVTKG 284
+ L K G+ + A+ + E +S SG + L + +RN Q++ A +
Sbjct: 387 VDGLCKAGKLQDAKGVLAEMKS-SGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKEND 445
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ T+ ++ G ++G+ ++ L+ +K
Sbjct: 446 CQADTVTFNVILGGLCREGRFDEALDMIEK 475
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 93/224 (41%), Gaps = 7/224 (3%)
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM-SLFAKMNDAEYTCVISSLVKLGEFEKAE 239
+ N ++ L+ + G D + K+M S ++ N Y+ ++ L + G ++A
Sbjct: 270 KPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAF 329
Query: 240 NIYDEWESISG-TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+++E S DP N+L+ + + + A + + G P + L G
Sbjct: 330 ELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDG 389
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGH 357
K G+++ + S K PD T+ N G ID A LL ++ N
Sbjct: 390 LCKAGKLQDAKGVLAEMKSSGLK--PDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQ 447
Query: 358 VSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
T +N +L + G+ L ++E++ + V ++ + +++
Sbjct: 448 ADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIV 491
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 126/299 (42%), Gaps = 3/299 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ L+ + + EA L E+M E G + YN +L+ + G+ +V + ++ L+
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P++ T+N L D A + FLE++ PD +SY+TL P +
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+EM + + V+Y+ L+ Y+ G D ++++ ++ + + Y+ +I
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L + G+ A ++ + + D V L+ +L + + +V P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
+ LL + K + + V E F + + R + PD + L D + AE
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHEL--TERGFSPDVEISKVILETLRRSDDKEAAE 457
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 10/301 (3%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
L YN++L + +G+ D V + L P+ TY L + E A F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ P+ SYS L + + + ++AA L EM + N V Y SLLS MG
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E + ++ +M+ + Y +I K G+ +A +++E N
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF--KKAIG 317
LL+ + + + +S + ++ +G P T+ L G+ K G M + F +++G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGK 375
V + L+ +K G A+ LL + +G V +I YN L+ Y+K+G
Sbjct: 258 CPPDVVSYNTLMRGMCSK----GKPHEAQRLLREMIRSG-VGPDIVSYNILIDGYSKSGA 312
Query: 376 M 376
+
Sbjct: 313 L 313
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 1/263 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
LL S Q ++ EA ++ M+ G Y+ ++ ++D+ ++L E +
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+VVTY L+ + A F + PD + Y+ L + K +A
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+EM ++ C Y+SLLS ++ G V ++K M+ N + ++
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K+G+ +A ++ E S+ D N L+ ++ + A+ ++ G+ P
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDI 297
Query: 290 TTWELLTWGYLKKGQMEKVLECF 312
++ +L GY K G ++ ++ F
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLF 320
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 150/344 (43%), Gaps = 13/344 (3%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ-L 96
L D M + +LH+Y + K +A L E+M E G + YN +L+++ G+
Sbjct: 210 LQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSW 269
Query: 97 DKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
K+ +L+E++ K D T + L+ACA + A+ F ELK +P ++Y+ L
Sbjct: 270 RKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNAL 329
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
++ K + +A + LKEME+ C + V Y+ L++ Y G+ E + + M
Sbjct: 330 LQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGV 389
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
N YT VI + K G+ ++A ++ + + N +L+ +++
Sbjct: 390 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIK 449
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDH---RLIT 330
+ + G P TW + KG + V F+ K+ G + PD +
Sbjct: 450 MLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCG----FEPDRDTFNTLI 505
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+AY + + +D ++ R + YN+LL A+ G
Sbjct: 506 SAYGRCGSE--VDASKMYGEMTRAGFNACVTTYNALLNALARKG 547
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 8/280 (2%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD+ DT + L+ +Y + +A + +M+ GF C YN +LN G
Sbjct: 496 PDR----DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS 551
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
++ ++K K P +Y+L L A + E+ + + +I P W+ TL
Sbjct: 552 GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLL 611
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
K + +K + + V ++S+LS++T D+ I + +
Sbjct: 612 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNP 671
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
+ Y ++ V+ GE KAE I E D N ++ + + ++ A
Sbjct: 672 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRML 731
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKK---GQMEKVLECFKK 314
+ + +GI+PC T+ GY G++E V+EC K
Sbjct: 732 SEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAK 771
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N ML+++ N D+ +LQ + ++ +PD+VTYN + + + AE+ L+
Sbjct: 641 FNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K+++ PD +SY+T+ + + L ++A L EM +R R Y++ +S YT MG
Sbjct: 701 KSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYG 760
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
E+ + + M + N+ + V+ + G++ +A
Sbjct: 761 EIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 797
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 151/392 (38%), Gaps = 41/392 (10%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++ +Y + K EA L M E G + YN +L++ + +++ +ML ++
Sbjct: 395 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDM 454
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N P+ T+N LA C ++ + + F E+K +PD +++TL S Y +
Sbjct: 455 KSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 514
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A+ EM + Y++LL+ G + M S K + Y+ +
Sbjct: 515 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 574
Query: 226 ISSLVKLGEFEKAE---------NIYDEW-------------ESISGT------------ 251
+ K G + E I+ W +++G+
Sbjct: 575 LQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 634
Query: 252 -GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
D + N +L+ + N + AE + G+ P T+ L Y+++G+ K E
Sbjct: 635 KPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEE 694
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 369
K S K PD +G + A +L + G YN+ +
Sbjct: 695 ILKTLEKSQLK--PDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 752
Query: 370 YAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
Y G I ++E M K++ + + T K++
Sbjct: 753 YTAMGMYGEIEDVIECMAKNDCRPNELTFKMV 784
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K PD+V +N L+ N + AE + + ++PD ++Y++L +Y++
Sbjct: 631 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECW 690
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA LK +EK + + V+Y++++ + G E +R+ +M + Y +
Sbjct: 691 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFV 750
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
S +G + + E++ + + +++ Y + A F +++ K
Sbjct: 751 SGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFD 808
Query: 287 PCY 289
PC+
Sbjct: 809 PCF 811
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 146/340 (42%), Gaps = 11/340 (3%)
Query: 31 RENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
RE FF PDK T + L++ + A +M+ M GF YN +++
Sbjct: 294 REGFF---PDKY----TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGL 346
Query: 91 ISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G++D+ ++L Q ++++ SP+ VTYN ++ +N E A K L L I PD
Sbjct: 347 CKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDV 406
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y++L A KEM+ + C + Y+ L+ G E L + K+
Sbjct: 407 CTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M N Y +I K +AE I+D+ E + + N L+ +
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+E A ++++ +G++P T+ L + K G ++K + + + PD
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTM--ASDGCEPDIVTY 584
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 368
L + G ++ A LL T++ G +++ YN +++
Sbjct: 585 GTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQ 624
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 167/397 (42%), Gaps = 44/397 (11%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A +A Q R E + D PD T + ++ +++ A + E+M E G +
Sbjct: 204 ALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVV 263
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQE--LKKNTSPDVVTYNLWLAACASQNDKETAEKA 136
+ N ++N + G++++ + ++E L++ PD T+N+ + + + A +
Sbjct: 264 TNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEV 323
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS---- 192
+ + DPD +Y++L S K+ ++A L +M +R C N V Y++++S
Sbjct: 324 MDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCK 383
Query: 193 ------------LYTNMGYKDEV-------------------LRIWKKMMSLFAKMNDAE 221
+ T G +V + ++K+M + ++
Sbjct: 384 ENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFT 443
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRL 280
Y +I SL G+ ++A N+ E E +SG + N L+ + ++ AE ++++
Sbjct: 444 YNMLIDSLCFRGKLQEALNLLKEME-VSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
+G+ T+ L G K ++E+ + + I + PD + + G
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMI--MEGLRPDKFTYNSLLTYFCKAG 560
Query: 341 DIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
DI A ++ T+ + G Y +L+ KAG++
Sbjct: 561 DIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRV 597
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 43 RGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
R T + L+ + +NK+ AEAE + ++M G + + YN +++ + ++++ Q+
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQL 533
Query: 103 L-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ Q + + PD TYN L D + A + +PD ++Y TL + K
Sbjct: 534 MDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCK 593
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E A L+ ++ + AY+ ++ E +R++++M+ +
Sbjct: 594 AGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVT 653
Query: 222 YTCVISSLVKLG 233
Y V L + G
Sbjct: 654 YKIVFRGLCQGG 665
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 129/339 (38%), Gaps = 22/339 (6%)
Query: 90 YISNGQLDKVPQMLQ--ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y S G +++ Q + E++ + YN L N + E A + I P
Sbjct: 134 YASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRP 193
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
D +++ L + A ++EME + +++++ + G D +R+
Sbjct: 194 DVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVK 253
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAAYIN 266
++M+ + + +++ K G E+A +E G D N+L+
Sbjct: 254 EQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSK 313
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
++ A + ++ +G P T+ L G K G++++ ++ + I R P+
Sbjct: 314 TGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE--RDCSPNT 371
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL------RTYAKA------ 373
+ L ++ ++ A L + L G + YNSL+ R + A
Sbjct: 372 VTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKE 431
Query: 374 ----GKMPLIIVERMQKDNVQMDAETQKVLKITSEMPVS 408
G P M D++ + Q+ L + EM VS
Sbjct: 432 MKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVS 470
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T + L+ S + K+ EA L ++M E G Y +++++Y G+++ +L++
Sbjct: 121 TYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKM 180
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L KN +PD T N + A + E A + F +KK+ + + +S++ + K
Sbjct: 181 LDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKV 240
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A + EME R + N + +++L++ Y E ++ ++M S + YTC+
Sbjct: 241 GLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCM 300
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + K G KA ++ + E + + N+L+ A + + + A Y + KGI
Sbjct: 301 IEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGI 360
Query: 286 KPCYTTWELL 295
P T +L
Sbjct: 361 LPDAITATVL 370
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 13/302 (4%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PD + N+ L N + A K F +K D +Y+ L + +
Sbjct: 76 IKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRD 135
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A EME+R C + AY++++ +Y G + + + KKM+ +D +
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVP-NILLAAYINRNQLEMAESFYNRLVTKG 284
I+++ + G E A I++ + SG V N +L ++ +A F + + +G
Sbjct: 196 ITAVSRTGRTELACEIFERMKK-SGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARG 254
Query: 285 IKPCYTTWELL--TWGYLK-KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
IKP T+ L G K + KVL+ + A PD T + G+
Sbjct: 255 IKPNSITFNTLINCLGRAKYASEAYKVLQEMRSA-----GLTPDVFTYTCMIEAFAKAGN 309
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKV 398
+ A + + AG + + YN L+ KAG+ I M+K + DA T V
Sbjct: 310 MGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATV 369
Query: 399 LK 400
L+
Sbjct: 370 LQ 371
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
Query: 1 MERRRPHGAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQ 57
ER + G V S+ + +A + F + + + P+ T + L++ +
Sbjct: 212 FERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGR 271
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVT 116
K ++EA ++++M G Y M+ + G + K +M +++K S +VVT
Sbjct: 272 AKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVT 331
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
YNL + A + A + ++KK I PD I+ + L L K +L + +L E E
Sbjct: 332 YNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKL---SGISLDENE 388
Query: 177 KR 178
+R
Sbjct: 389 QR 390
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 92/243 (37%), Gaps = 38/243 (15%)
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L ++ CR + + +++++ Y +V+ ++++ +K N Y CVI SLVK
Sbjct: 2 LAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVK 61
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL--------------------- 270
G A + D+ D + N++L N +
Sbjct: 62 AGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYT 121
Query: 271 --------------EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
E A ++ + +G P + + Y K G++E + KK +
Sbjct: 122 YAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKML 181
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
+ PD + + + G + A + ++ +G V+T +N++L KAGK
Sbjct: 182 D--KNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGK 239
Query: 376 MPL 378
+ L
Sbjct: 240 VGL 242
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 145/355 (40%), Gaps = 14/355 (3%)
Query: 44 GPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
GP C+AL+ + ++A+A ++ + YN M+ Y GQLD +++
Sbjct: 105 GP--CAALIKKLCASGRTADARRVLAASGPDVMV-----YNAMVAGYCGAGQLDAARRLV 157
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
++ PD TYN + + A ++ + PD ++Y+ L K
Sbjct: 158 ADMP--VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRS 215
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++A L EM + C + V Y+ +L+ G ++ + K + S + N Y
Sbjct: 216 GYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYN 275
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
V+ L +E AE + +E + N+L++ R +E A ++
Sbjct: 276 IVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQY 335
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G P ++ L + K+ ++ K +E + + R PD L G++D
Sbjct: 336 GCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS--RGCYPDIVSYNTLLTALCRNGEVD 393
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
A LL L++ G I YN+++ KAGK L +++ M +Q D T
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIIT 448
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 134/288 (46%), Gaps = 11/288 (3%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLN 88
F +NLP P+T S +L ++ +AE LME+M+ G CP + +N +++
Sbjct: 258 FLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKG---CPPNVVTFNMLIS 314
Query: 89 LYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-ID 146
G ++ ++L+++ + +P+ ++YN L A Q A + F+EL ++
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME-FVELMVSRGCY 373
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD +SY+TL + + + A L +++ + C ++Y++++ T G E L +
Sbjct: 374 PDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALEL 433
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+M S + + Y+ + S L + E+A + + + + + N +L
Sbjct: 434 LDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCK 493
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
R + A + +++ G P +T+ +L G +G +++ E F +
Sbjct: 494 RRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 134/307 (43%), Gaps = 11/307 (3%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFEN--LPDKMRGPDTCSALLHSYVQNKKSAEAEALM 68
+R R R + A A+ E+ F LPD + T + LL + + +A L+
Sbjct: 173 IRGLCGRGRTSNALAVL----EDMFRRGCLPDVV----TYTILLEATCKRSGYKQAMKLL 224
Query: 69 EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQ 127
++M + G + YN +LN G+++ + L+ L P+ V+YN+ L +
Sbjct: 225 DEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTA 284
Query: 128 NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
E AEK E+ P+ ++++ L S + L E A L++M + C N ++Y
Sbjct: 285 ERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSY 344
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+ LL + + + + M+S + Y ++++L + GE + A + + +
Sbjct: 345 NPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKD 404
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ N ++ + + A + + +KG++P T+ + G ++ ++E+
Sbjct: 405 KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEE 464
Query: 308 VLECFKK 314
+ F K
Sbjct: 465 AVRTFCK 471
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 76/217 (35%), Gaps = 38/217 (17%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E +P P++ S LLH++ + KK +A +E M G + YN +L
Sbjct: 328 VLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALC 387
Query: 92 SNGQLDKVPQMLQELK------------------------------------KNTSPDVV 115
NG++D ++L +LK K PD++
Sbjct: 388 RNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDII 447
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY+ + ++ E A + F +++ I P Y+ + K A M
Sbjct: 448 TYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYM 507
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
C N Y+ L+ G E ++ ++ S
Sbjct: 508 ISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCS 544
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 9/305 (2%)
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ +G++DK + E+ ++ P ++ N + + + AE ++ + I PD
Sbjct: 220 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 279
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS + K + +KA L++M + R N + Y+SL+ Y+ G +E +R++K
Sbjct: 280 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M S I +L K G +A+ I+D D + +L Y
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 399
Query: 269 QLEMAE--SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+A+ + +N ++TKGI P + +L Y + G M+K + F+ + +PD
Sbjct: 400 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM--QNKGMIPDT 457
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG---KMPLIIVE 382
+ L G +D A H + + G +E +Y L++ G K +I E
Sbjct: 458 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 517
Query: 383 RMQKD 387
M KD
Sbjct: 518 MMNKD 522
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 132/323 (40%), Gaps = 49/323 (15%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ + + D PD T S ++ ++K +AE ++E+M E G + YN +++
Sbjct: 265 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 324
Query: 90 YISNGQLDKVPQMLQELK------------------------------------KNTSPD 113
Y +G ++ ++ +++ K PD
Sbjct: 325 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 384
Query: 114 VVTYNLWLAACASQNDKETAE-KAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATT 171
+++Y+ L A+ D A+ L TK I P+ ++ L + Y + + +KA
Sbjct: 385 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 444
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
++M+ + + V +++++S +G D+ L + M+ + ++A Y C+I
Sbjct: 445 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 504
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNI-LLAAYINR----NQLEMAESFYNRLVTKGIK 286
GE KA+ + E + D P + ++ IN ++ + + +V G +
Sbjct: 505 HGELVKAKELISEMMN----KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 560
Query: 287 PCYTTWELLTWGYLKKGQMEKVL 309
P T+ L GY G ME+
Sbjct: 561 PNVVTFNSLMEGYCLVGNMEEAF 583
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 147/336 (43%), Gaps = 11/336 (3%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
C++++ + K+ +AE++++KM + G Y+ +++ + +DK ++L+++
Sbjct: 248 CNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV 307
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ T P+ +TYN + + + + F ++ + P + ++ K
Sbjct: 308 EAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTN 367
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLY---TNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A M + + + ++YS++L Y T+ D V I+ M++ N +
Sbjct: 368 EAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD-VHNIFNLMLTKGIAPNKHVFN 426
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I++ + G +KA I+++ ++ D ++++ +L+ A +N +V
Sbjct: 427 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV--PDHRLITAAYNKLEEQGD 341
G+ P + L G G++ K E + + K + P + ++ N L ++G
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMM---NKDIPPPGVKYFSSIINNLCKEGR 543
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ + ++ + G + +NSL+ Y G M
Sbjct: 544 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 579
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 154/377 (40%), Gaps = 17/377 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE++ +K PDT + ++ S + + +A M + G Y ++
Sbjct: 444 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 503
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
++G+L K +++ E+ K+ P V Y + + + K +++ +T P+
Sbjct: 504 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 563
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+++++L Y + E+A L M N Y +L+ Y G D+ L +++
Sbjct: 564 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 623
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ K Y+ ++ L + A+ ++ E T ++L N
Sbjct: 624 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 683
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A +L +K T+ ++ K G+ ++ E F S VP+ +
Sbjct: 684 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI--STYGLVPNIQTY 741
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRT------YAKAGKMPLIIVE 382
+ L ++ + A++L +++ +GH S + + N ++R AKA II E
Sbjct: 742 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 801
Query: 383 RMQKDNVQMDAETQKVL 399
+N+ ++A T +L
Sbjct: 802 ----NNLTLEASTISLL 814
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 116/259 (44%), Gaps = 1/259 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ Y EA AL++ M+ G Y +++ Y NG++D + ++
Sbjct: 565 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 624
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P V Y++ L A+K F E+ ++ +Y + +
Sbjct: 625 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 684
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+++ + + + ++ ++S +G + E ++ + + N Y+ +
Sbjct: 685 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 744
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I++L+K +E+A+N++ E D R+ N ++ +N+ ++ A ++ + + +
Sbjct: 745 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 804
Query: 286 KPCYTTWELLTWGYLKKGQ 304
+T LL + ++G+
Sbjct: 805 TLEASTISLLASLFSREGK 823
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 109/288 (37%), Gaps = 10/288 (3%)
Query: 24 QALQTRAREN----FFENLPDKMRGPDTCS--ALLHSYVQNKKS--AEAEALMEKMSECG 75
AL R N F+++ K PD S +LH Y S A+ + M G
Sbjct: 358 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 417
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAE 134
+N ++N Y G +DK + ++++ K PD VT+ +++ + A
Sbjct: 418 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 477
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY-SSLLSL 193
F + + P Y L KA + EM + V Y SS+++
Sbjct: 478 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 537
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G E I M+ + N + ++ +G E+A + D SI +
Sbjct: 538 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 597
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ L+ Y +++ A + + ++ KG+KP + ++ G +
Sbjct: 598 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 645
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ + QN L+E+M E G + + Y ++N + G +D+ +L+ +
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ ++Y + L S AE ++ + + I+++TL + K L E+A
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M C + ++YS+++ G DE L + M++ N Y+ + S+L
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G K ++D + + D + N ++++ R + E A F +V+ G P
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDH 326
+T+ +L G +G +++ E + G++RK + H
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/385 (18%), Positives = 153/385 (39%), Gaps = 47/385 (12%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHML 87
+ +LP PD S A+L K+ + LME+M + CP + +N ++
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR---MACPPNIVTFNTLI 269
Query: 88 NLYISNGQLDKVPQMLQELKKNTS------------------------------------ 111
+ NG ++V ++L ++ ++
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+VV YN L S E E+ E+ D ++++ L + + L ++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L++M +R C + + Y+++++ + G DE + + K M + K N YT V+ L
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+ AE++ + +P N L+ + +E A +++ G P +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ + G K G+ ++ LE + + P+ + ++ + L +G I+ +
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVN--KGMSPNTIIYSSIASALSREGRINKVIQMFDN 567
Query: 352 LRNAGHVSTEI-YNSLLRTYAKAGK 375
+++ S + YN+++ + K G+
Sbjct: 568 IQDTTIRSDAVLYNAVISSLCKRGE 592
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 124/311 (39%), Gaps = 21/311 (6%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRG----PDTCSALLHSYVQNKKSAEAEA 66
VRA R R+A A A+ + +P RG P +L + + A
Sbjct: 129 VRALCARGRIADALAV--------LDEMPR--RGCAPIPPMYHVILEAACRGGGFRSAVR 178
Query: 67 LMEKMSECGFLKCPLPY---NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLA 122
++E + G C L N +LN G +D+ +L++L PDVV+YN L
Sbjct: 179 VLEDLHARG---CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 235
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
++ E+ + P+ ++++TL S + L E+ L +M + C
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP 295
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
+ Y++++ G+ + I +M S K N Y ++ L +E+ E +
Sbjct: 296 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
E D NIL+ + ++ +++ +G P T+ + G+ K+
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKE 415
Query: 303 GQMEKVLECFK 313
G +++ + K
Sbjct: 416 GLIDEAVMLLK 426
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 124/362 (34%), Gaps = 75/362 (20%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
YN M+ Y GQL+ ++ + P+ TY + A ++ A E+ +
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP--VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P Y + + A L+++ R C + + +L+ + G DE
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 210
Query: 203 VLRI----------------------------WKKMMSLFAKM-------NDAEYTCVIS 227
L + W + L +M N + +IS
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L + G FE+ + + T D R+ ++ LE+A NR+ + G+KP
Sbjct: 271 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 330
Query: 288 ---CYTT----------WE----------------------LLTWGYLKKGQMEKVLECF 312
CY T WE +L + + G +++V+E
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
++ + R +PD T N ++G ID A LL ++ G I Y +L+
Sbjct: 391 EQMLE--RGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448
Query: 372 KA 373
A
Sbjct: 449 SA 450
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 118/268 (44%), Gaps = 4/268 (1%)
Query: 47 TCSALLHSYVQNKKSA---EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
T ++L+ Y + + + L+++M E G + + ++N Y N ++
Sbjct: 228 TYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVF 287
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+E+K+ + VVTYN ++ S+ E K E++ + P+ I++ + + K
Sbjct: 288 EEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ A + M +R + V Y+ L+ +Y +G ++ + + + M N Y
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
C+I+ + G++ A + DE + D N+L+ A + ++ A + +
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLE 310
G++P + T+ + G+ KG ++ E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/301 (18%), Positives = 117/301 (38%), Gaps = 36/301 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L++ Y +N +A A + E+M + G + YN +++ S G++++ ++++E+
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
Query: 107 K------------------------------------KNTSPDVVTYNLWLAACASQNDK 130
+ +N PDVV YN+ +
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 385
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A + K I P+ +Y+ L + + + A+ L EM+++ + V Y+ L
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ G + +++ +M + + N Y +I G + A I E
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ N+ + + +++ A N ++ K + P T+E + G ++KG +
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
Query: 311 C 311
C
Sbjct: 566 C 566
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 127/348 (36%), Gaps = 82/348 (23%)
Query: 106 LKKNTSPDVVTYNLWLAA-CASQNDKETAEKA---------------------------- 136
L++ SPD+ T+N ++ C ++ + A
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242
Query: 137 ---------FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
E+ + I P +++ L + Y K A +EM+++ + V Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+SL+S + G +E +++ ++M L N+ + CV+ K G A + D
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ--- 304
+ D + NIL+ Y ++E A + + KGI P TT+ L G+ + G
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422
Query: 305 --------MEKVLE-------------CFKKAIGSVRKWV------------PDHRLITA 331
EK +E C K G VRK V P+H
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCK---GEVRKAVKLLDEMSEVGLEPNHLTYNT 479
Query: 332 AYNKLEEQGDIDGAEHLLVTL---RNAGHVSTEIYNSLLRTYAKAGKM 376
++G+I A + + R +V T YN ++ + + GKM
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT--YNVFIKYFCQIGKM 525
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 118/296 (39%), Gaps = 12/296 (4%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + N LA + AEKAF + ++ PD +++T+ S ++ KA
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI---WKKMMSLFAKMNDAEYTCVISS 228
K+++ + Y+SL+ Y G + + K+M+ + +I+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K A +++E + N L++ + ++E + G+ P
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGA 345
T+ + G+ KKG M + + R PD + ++ Y +L + D
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGM--TERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 346 EHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+ + + +V+T YN L+ ++++G + +++ M++ ++ D T VL
Sbjct: 392 KEAMAKKGISPNVTT--YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ + QN L+E+M E G + + Y ++N + G +D+ +L+ +
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ ++Y + L S AE ++ + + I+++TL + K L E+A
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M C + ++YS+++ G DE L + M++ N Y+ + S+L
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G K ++D + + D + N ++++ R + E A F +V+ G P
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDH 326
+T+ +L G +G +++ E + G++RK + H
Sbjct: 650 STYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 688
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/385 (18%), Positives = 152/385 (39%), Gaps = 47/385 (12%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHML 87
+ +LP PD S A+L K+ + LME+M + CP + +N ++
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR---MACPPNIVTFNTLI 306
Query: 88 NLYISNGQLDKVPQMLQELKKNTS------------------------------------ 111
+ NG ++V ++L ++ ++
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+VV YN L S E E+ E+ D ++++ L + + L ++
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L++M + C + + Y+++++ + G DE + + K M + K N YT V+ L
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+ AE++ + +P N L+ + +E A +++ G P +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ + G K G+ ++ LE + + P+ + ++ + L +G I+ +
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVN--KGMSPNTIIYSSIASALSREGRINKVIQMFDN 604
Query: 352 LRNAGHVSTEI-YNSLLRTYAKAGK 375
+++ S + YN+++ + K G+
Sbjct: 605 IQDTTIRSDAVLYNAVISSLCKRGE 629
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 95/232 (40%), Gaps = 1/232 (0%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N +LN G +D+ +L++L PDVV+YN L ++ E+ +
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 292
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P+ ++++TL S + L E+ L +M + C + Y++++ G+ +
Sbjct: 293 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 352
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
I +M S K N Y ++ L +E+ E + E D NIL+
Sbjct: 353 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 412
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ ++ +++ G P T+ + G+ K+G +++ + K
Sbjct: 413 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 464
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 123/362 (33%), Gaps = 75/362 (20%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
YN M+ Y GQL+ ++ + P+ TY + A ++ A E+ +
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP--VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
P Y + + A L+++ R C + + +L+ + G DE
Sbjct: 188 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 247
Query: 203 VLRI----------------------------WKKMMSLFAKM-------NDAEYTCVIS 227
L + W + L +M N + +IS
Sbjct: 248 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 307
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L + G FE+ + + T D R+ ++ LE+A NR+ + G+KP
Sbjct: 308 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 367
Query: 288 ---CYTT----------WE----------------------LLTWGYLKKGQMEKVLECF 312
CY T WE +L + + G +++V+E
Sbjct: 368 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 427
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
++ + +PD T N ++G ID A LL ++ G I Y +L+
Sbjct: 428 EQMLE--HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485
Query: 372 KA 373
A
Sbjct: 486 SA 487
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 160/409 (39%), Gaps = 48/409 (11%)
Query: 33 NFFE---NLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
FF+ N P TC+ LL+++V+ K+ EA L+++ E + Y ++N
Sbjct: 61 TFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVING 120
Query: 90 YISNGQLDKVPQMLQELK-----------------------------------KNTSPDV 114
+ GQ+D+ ++L E+K + SP+V
Sbjct: 121 FCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNV 180
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKT-----KIDPDWISYSTLTSLYIKMELPEKAA 169
+TYN + N + A + F +++K +PD ISYST+ K + +KA
Sbjct: 181 ITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAY 240
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
K M C N V YSSL+ + E L + M +N ++ ++ +L
Sbjct: 241 EYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHAL 300
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K E EKA ++ + N+ + +++ A +V + P
Sbjct: 301 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV 360
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ + G+ K G+M+K + F + + V + +P + E A +
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMM--VHECIPHPVTFMTLLHGFSEHKKSREAFRVH 418
Query: 350 VTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
+ NAG + + YN L+ A + L I +M++ Q D T
Sbjct: 419 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNT 467
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 133/317 (41%), Gaps = 14/317 (4%)
Query: 1 MERR--RPHGAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSY 55
ME+R HG + SY + A +A + +F+ + P+ T S+L+
Sbjct: 206 MEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGL 265
Query: 56 VQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDV 114
+ + +E L+ M E GF + +N ML+ N + +K Q + L K P+V
Sbjct: 266 CKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNV 325
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
VTYN+ + + A + LE+ ++K+ PD I+YS++ + K +KA
Sbjct: 326 VTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTR 385
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 234
M C + V + +LL ++ E R+ + M++ Y ++ +
Sbjct: 386 MMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADS 445
Query: 235 FEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP----CYT 290
E A IY + + D L+ +++ A+ F + + + P C+
Sbjct: 446 VESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHA 505
Query: 291 TWELLTWGYLKKGQMEK 307
E+L K+G++++
Sbjct: 506 LVEVLC----KQGEVDE 518
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 37/243 (15%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T LLH + ++KKS EA + E M GF+
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI--------------------------- 427
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
P + TYN+ + + E+A + + ++K+ K PD +Y+ L +
Sbjct: 428 -------PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A L ME N +L+ + G DE + ++ + + +
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKI 540
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L ++E A + S D ++ +A + + A ++V KG
Sbjct: 541 LVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597
Query: 285 IKP 287
++P
Sbjct: 598 VRP 600
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 6/167 (3%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C AL+ + + EA ++++ + E G C P + + L K + +L
Sbjct: 503 CHALVEVLCKQGEVDEACSVLDNVVEVG---CQ-PLGETFKILVEELYLRKKWEAASKLL 558
Query: 108 KNTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ D TY+L +A + A + ++ + PD +Y + ++
Sbjct: 559 RSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRV 618
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
E A ++M R C V Y+ L+ + DE RI++ M++
Sbjct: 619 ESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVA 665
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T SAL+++ + K A L +M E G + + + +++ + NGQ+D + +
Sbjct: 308 PDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKES 367
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
Q+ L K PD+V YN + D A + + + PD ++Y+TL + +
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCR 427
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A KEM++ +RV +S+L+ G + R ++M+ K +D
Sbjct: 428 GGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVT 487
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT ++ + K G+ + + E +S + N+LL Q++ A+ + ++
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEK 307
G+ P T+ L G+ + K
Sbjct: 548 NVGVVPDDITYNTLLEGHHRHANASK 573
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 145/355 (40%), Gaps = 11/355 (3%)
Query: 24 QALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 83
Q + + NF +P +RG C LL ++ + ++ + GF +
Sbjct: 191 QCFRLSRKHNFV--VP--IRG---CGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVF 243
Query: 84 NHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ++N + G + ++ E+ K++ P VV++N + + + + ++K
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
++ PD +YS L + K + A EM +R N V +++L+ ++ G D
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDL 363
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ ++KM+S + + Y +++ K G+ A NI D D L+
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLID 423
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ ++ A + GI+ + L G K+G++ ++ + + K
Sbjct: 424 GFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMK- 482
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
PD T + ++GD LL +++ GH+ + YN LL K G+M
Sbjct: 483 -PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQM 536
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 158/368 (42%), Gaps = 47/368 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ +Y + + EA M G + + +N M+++ ++GQL++ ++Q++
Sbjct: 327 TYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKM 386
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PD TYN+ ++ A N+ + A F ++K+ +++PD +SY TL + L
Sbjct: 387 EELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLV 446
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + EM++R + S+L +Y G + +W + L M+ Y+
Sbjct: 447 GEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSW-LWFRRFHLEGNMSSECYSAN 505
Query: 226 ISSLVKLGEFEKAENIY---DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
I + + G +AE + E +S N+++ AY N+ E A + +
Sbjct: 506 IDAYGERGHILEAEKAFLCCKESRKLS----VLEFNVMIKAYGISNRYEKACQLIDSMEN 561
Query: 283 KGIKPCYTTWELLTW-----------------------------------GYLKKGQMEK 307
G+ P ++ L ++K GQ+E
Sbjct: 562 HGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEM 621
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSL 366
FK+ IG + PD + N + G++ A + + LRNAG ++ IYNSL
Sbjct: 622 AEGLFKEMIGYNVQ--PDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSL 679
Query: 367 LRTYAKAG 374
++ Y K G
Sbjct: 680 IKLYTKVG 687
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 72 SECGFLKCP-------LPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAA 123
+E FL C L +N M+ Y + + +K Q++ ++ + PD +YN +
Sbjct: 518 AEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQI 577
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
AS + A+ +++++T++ D I Y + S +IK+ E A KEM + +
Sbjct: 578 LASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPD 637
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V Y L++ + ++G E + + + MN Y +I K+G E+A+ Y
Sbjct: 638 VVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYK 697
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ D N ++ Y R+ ++ AE + L KG
Sbjct: 698 MLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKG 738
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
Y+ ++ Y G + + + K++ V+ +N+ + A N E A + ++
Sbjct: 502 YSANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMEN 561
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ PD SY++L + +LP KA L +M++ + + Y ++
Sbjct: 562 HGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAV------------ 609
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
ISS +KLG+ E AE ++ E + D V IL+
Sbjct: 610 -----------------------ISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILIN 646
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
A+ + + A ++ N L G+ + L Y K G +E+ E +K S +
Sbjct: 647 AFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQAS--EV 704
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLII 380
PD + E+ + AE + +L+ G + + +L Y + GK+ I
Sbjct: 705 GPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLCMYKRIGKLKEAFQI 764
Query: 381 VERMQKDNVQMD 392
V++M++ + D
Sbjct: 765 VQKMRELGLVTD 776
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
LPDK + ++L+ +A+ + KM E + +PY +++ +I GQL+
Sbjct: 565 LPDKF----SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLE 620
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDK-------------------------- 130
+ +E+ N PDVV Y + + A A +
Sbjct: 621 MAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLI 680
Query: 131 ---------ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 181
E A++A+ L+ +++ PD S + + LY + + ++A + + KR
Sbjct: 681 KLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESL-KRKGD 739
Query: 182 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
N +++ +L +Y +G E +I +KM L + Y V+ G F+ A
Sbjct: 740 ANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGT 799
Query: 242 YDE 244
+ E
Sbjct: 800 FKE 802
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 27 QTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
Q E F+ + PD L++++ EA + + G + YN
Sbjct: 618 QLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYN 677
Query: 85 HMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++ LY G L++ + + L+ + PDV + N + + ++ + AE+ F LK+
Sbjct: 678 SLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKR- 736
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
K D + S++ + +Y ++ ++A +++M + + ++Y+++L Y G +
Sbjct: 737 KGDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDA 796
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
+ +K+M+ + +D + + LVK G
Sbjct: 797 VGTFKEMIEAAIQPDDCTFKSLGVVLVKCG 826
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 44 GPDTCSA--LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
GPD S+ ++ Y + +AE + E + G + ML +Y G+L + Q
Sbjct: 705 GPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDAN-EFSFAMMLCMYKRIGKLKEAFQ 763
Query: 102 MLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
++Q++++ D+++YN L A + A F E+ + I PD ++ +L + +
Sbjct: 764 IVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLV 823
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
K +P++A L+ K+ + A++S+L
Sbjct: 824 KCGIPKQAVGKLEMTRKKDPQSGLQAWASIL 854
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 33/255 (12%)
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM R Y +L+ +Y+ G +E L +M + ++ V+ + K G
Sbjct: 221 EMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAG 280
Query: 234 EFEKAENIYDEW------------------ESISGTGDPRVP------NILLAAYINRNQ 269
EF+KAE + W ++ P V N L+ Y Q
Sbjct: 281 EFKKAEQFFKNWSLGKTLKDEGKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQ 340
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
L A + ++ +GI P T+ + GQ+E+ +K + PD R
Sbjct: 341 LREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKM--EELRCPPDTRTY 398
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAK---AGKMPLIIVERM 384
+ + +ID A ++ A + ++ Y +LL ++ G+ I+V M
Sbjct: 399 NILISLHAKHNNIDRAASYFKKMKEA-RLEPDLVSYRTLLYAFSIRHLVGEAE-ILVSEM 456
Query: 385 QKDNVQMDAETQKVL 399
+ +++D TQ L
Sbjct: 457 DERGLEIDEFTQSAL 471
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 128/305 (41%), Gaps = 3/305 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T A+++ + + + L+ +M+ G YN +++ +G + K + ++
Sbjct: 256 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 315
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ + PD+VTYN ++ A++ + + P+ SY+ L Y K
Sbjct: 316 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 375
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A+ L EM +R + + V Y +L+ G D L I +KM+ + Y
Sbjct: 376 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 435
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S L K + A+ + E S D V L+ +I L+ A + + KG
Sbjct: 436 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 495
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ P + + GY K G M+ + C + R PD + + +Q D+DG
Sbjct: 496 MNPGIVGYNAMIKGYCKFGMMKDAMACINRM--KKRHLAPDEFTYSTVIDGYVKQHDLDG 553
Query: 345 AEHLL 349
A+ +
Sbjct: 554 AQKMF 558
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 148/353 (41%), Gaps = 7/353 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
TC ++ + K E L+E G + + YN +++ Y G ++ + EL
Sbjct: 188 TC-IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL 246
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K P V TY + + D + ++ +E+ + + Y+T+ K
Sbjct: 247 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 306
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA T++ M + C+ + V Y++L+S G E ++ ++ + N YT +
Sbjct: 307 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 366
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I + K G +++A N E D L+ + ++++A + +++ +G+
Sbjct: 367 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 426
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P + +L G KK ++ + + + +PD + + G++D A
Sbjct: 427 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD--QSVLPDAFVYATLVDGFIRNGNLDEA 484
Query: 346 EHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
L +T+ + YN++++ Y K G M + + RM+K ++ D T
Sbjct: 485 RKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT 537
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ-ELKKN 109
L+ + K A+ L+ +M + L Y +++ +I NG LD+ ++ + ++K
Sbjct: 436 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 495
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+P +V YN + + A +KK + PD +YST+ Y+K + A
Sbjct: 496 MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQ 555
Query: 170 TTLKEMEKRTCRKN 183
+EM K C+ N
Sbjct: 556 KMFREMVKMKCKPN 569
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 7/214 (3%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N+ + ++ PD T AL+H V + A + EKM E G YN +++
Sbjct: 381 NWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 440
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+L +L E L ++ PD Y + + + A K F + ++P
Sbjct: 441 CKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI 500
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ Y+ + Y K + + A + M+KR + YS+++ Y D +++++
Sbjct: 501 VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 560
Query: 210 MMSLFAKMNDAE----YTCVISSLVKLGEFEKAE 239
M+ + K N + +I SL E +E
Sbjct: 561 MVKMKCKPNVMDGLQGLLLIIPSLFAFANMECSE 594
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 33/244 (13%)
Query: 148 DWIS------------YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
DW+S YS+L L + + + L+ M R A S ++ Y+
Sbjct: 81 DWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYS 140
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTC--VISSLVKLGEFEKAENIYDEWESISGTGD 253
+ G ++ L ++ ++ + D C +++ LVKLG E A
Sbjct: 141 DSGLVEKALELYYFVLKTYTYFPDV-IACNSLLNMLVKLGRIEIAR-------------- 185
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ I++ +LE +G P + L GY KKG ME F
Sbjct: 186 -KFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFI 244
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
+ ++ ++P A N ++GD + LL+ + + G V+ ++YN+++ K
Sbjct: 245 EL--KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 302
Query: 373 AGKM 376
G +
Sbjct: 303 HGHI 306
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 181/425 (42%), Gaps = 24/425 (5%)
Query: 8 GAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEA 64
G + A +Y + +++ + + E +F+++ P+ + L+ + + EA
Sbjct: 551 GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAA 123
+ + M E G + Y+ +++ NG+ + + L+ LK PDV YN ++
Sbjct: 611 LSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISG 670
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 183
+ D E A + + E+ I+P+ + Y+TL + K+ KA E+E++ +
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPD 730
Query: 184 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 243
V YS+++ Y G E +++ +M+S + Y +I K G EKA +++
Sbjct: 731 VVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 790
Query: 244 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
E + S G N L+ ++ ++ A ++ +V K + P T+ +L Y K
Sbjct: 791 EAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849
Query: 304 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI- 362
ME+ + F R +P+ T+ + G+ L + G I
Sbjct: 850 MMEEAEQLFLDM--ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 907
Query: 363 YNSLLRTYAKAGK----MPLI---IVERMQKDNVQMDA---------ETQKVLKITSEMP 406
Y + Y K GK + L+ +VE ++ ++ DA + VL++ SEM
Sbjct: 908 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967
Query: 407 VSEVS 411
E+S
Sbjct: 968 KEELS 972
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 145/342 (42%), Gaps = 42/342 (12%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELK 141
Y +++ + G + K +L E++K P++ TYN ++ C + E E L ++
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K + PD +Y+ L + K + ++A + M NR Y++L+ + G +
Sbjct: 305 K-GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE----------WES---I 248
E LRI +M++ K+N Y +I + K GE KA ++++E W I
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423
Query: 249 SG----------------------TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
G T P ++L++ + + L+ A ++++ G+K
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + L Y+++ + E +E K I + +PD L ++ A+
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIAN--GVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 347 HLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 387
LLV + G + Y + + Y+K+G++ + ER KD
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ--VAERYFKD 581
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 140/335 (41%), Gaps = 6/335 (1%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T S L+ + +A ++++M G Y ++ Y+ + + ++L+
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 105 ELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ N PD+ YN + E A+ +++ + I P+ +Y +LY K
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+ A K+M N V Y+ L+ + ++G E L +K M+ + Y+
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I SL K G+ ++A ++ ++ D + N L++ + +E A Y+ ++
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GI P + L G K G++ K E F + + VPD + + + G++
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKARELFDEI--EEKDLVPDVVTYSTIIDGYCKSGNLT 748
Query: 344 GAEHLLVTLRNAGHVSTE--IYNSLLRTYAKAGKM 376
A L + + G +S + IY L+ K G +
Sbjct: 749 EAFKLFDEMISKG-ISPDGYIYCILIDGCGKEGNL 782
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 156/391 (39%), Gaps = 43/391 (10%)
Query: 27 QTRAREN--FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 82
Q R++E FE++P P+ T +AL+ +++ EA + ++M G +
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN M+ G++ K + E L PD TYNL + +D A + E+K
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
K+ P +YS L S +KA L +M + + N Y +L+ Y +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503
Query: 202 EVLRIWKKMMS------LF-----------------AKM------------NDAEYTCVI 226
+ + K M++ LF AKM N Y I
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ K GE + AE + + S + + IL+ + + A S + ++ KG+
Sbjct: 564 NLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI 623
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + + K G+ ++ + F K + + VPD L + + ++GDI+ A
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT--GVVPDVFLYNSLISGFCKEGDIEKAS 681
Query: 347 HLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
L L N + + +YN+L+ K G++
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEV 712
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 16/303 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ + + G +KV ++ E+ + + PD VTY+ ++A N ++A + F E+
Sbjct: 198 YNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEM 257
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ + P Y+TL +Y K+ E+A + EM R C Y+ L+ G
Sbjct: 258 KENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRV 317
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ ++K M+ K + +I+ L + ++A +++E ++ T PN++
Sbjct: 318 EDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCT-----PNVV 372
Query: 261 LAAYINRNQLE------MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
I ++ E A S+ R+ G+ P T+ +L G+ K ++EK L ++
Sbjct: 373 TYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEE 432
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLR-NAGHVSTEIYNSLLRTYAKA 373
+ + P + N L + + A L L+ N G S +Y +++ + K
Sbjct: 433 M--DEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKC 490
Query: 374 GKM 376
G+
Sbjct: 491 GRF 493
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 1/202 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L+ + + + +A L+E+M E GF CP Y ++N + + ++ QEL
Sbjct: 409 TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQEL 468
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+N S V Y + + A F E+KK PD +Y+ L + ++ ++
Sbjct: 469 KENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMM 528
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + + ME+ C + +++ +L+ G + ++ KM S K + Y V
Sbjct: 529 DEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTV 588
Query: 226 ISSLVKLGEFEKAENIYDEWES 247
+ L + G FE+A + E S
Sbjct: 589 LGCLSRAGLFEEATKLMKEMNS 610
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ + + + EA L +M + G + YN ++ + +D+ + + +++
Sbjct: 481 AVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEE 540
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N +PD+ ++N+ L A + A + F ++K + I PD +SY+T+ + L E+
Sbjct: 541 NGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEE 600
Query: 168 AATTLKEMEKRTCRKNRVAYSSLL 191
A +KEM + + + YSS+L
Sbjct: 601 ATKLMKEMNSKGFEYDLITYSSIL 624
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 126/300 (42%), Gaps = 11/300 (3%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAE--KAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
K+N D TY + L C +N + E + ++ K+ S + + ++++
Sbjct: 118 KRNFEHDSTTY-MALIRCLDEN-RLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKM 175
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND-AEYT 223
KA + +++ R CR Y+S++ + G+ ++V ++ +M S D Y+
Sbjct: 176 VNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYS 235
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+IS+ KL + A ++DE + ++ L+ Y ++E A + + + +
Sbjct: 236 ALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMR 295
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P T+ L G K G++E +K + K PD L+ N L +
Sbjct: 296 RCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCK--PDVVLMNNLINILGRSDRLK 353
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLII---VERMQKDNVQMDAETQKVL 399
A L +R + YN+++++ + P +ERM+KD V + T +L
Sbjct: 354 EAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSIL 413
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE-LK 141
N+++N+ + +L + ++ +E++ N +P+VVTYN + + + ++LE +K
Sbjct: 340 NNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMK 399
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS--------- 192
K + P +YS L + K EKA L+EM+++ AY SL++
Sbjct: 400 KDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYE 459
Query: 193 --------LYTNMGYKDEVLRIWKKMMSLFAK---MNDA-----------------EYTC 224
L N G +R++ M+ F K N+A Y
Sbjct: 460 AANELFQELKENCG--SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNA 517
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I+ +V+ ++A +++ E D NI+L + A + ++ +
Sbjct: 518 LITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSST 577
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
IKP ++ + + G E+ + K+
Sbjct: 578 IKPDAVSYNTVLGCLSRAGLFEEATKLMKE 607
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 108/253 (42%), Gaps = 7/253 (2%)
Query: 47 TCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + ++ S ++K +EA + +E+M + G + Y+ +++ + +++K +L+E
Sbjct: 373 TYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEE 432
Query: 106 L-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ +K P Y + + E A + F ELK+ Y+ + + K
Sbjct: 433 MDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGR 492
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+A EM+K C + AY++L++ DE +++ M + +
Sbjct: 493 FNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNI 552
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+++ L + G ++A ++ + +S + D N +L E A + +KG
Sbjct: 553 ILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG 612
Query: 285 IKPCYTTWELLTW 297
+ ++L+T+
Sbjct: 613 FE-----YDLITY 620
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 9/305 (2%)
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ +G++DK + E+ ++ P ++ N + + + AE ++ + I PD
Sbjct: 200 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 259
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS + K + +KA L++M + R N + Y+SL+ Y+ G +E +R++K
Sbjct: 260 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 319
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M S I +L K G +A+ I+D D + +L Y
Sbjct: 320 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 379
Query: 269 QLEMAE--SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+A+ + +N ++TKGI P + +L Y + G M+K + F+ + +PD
Sbjct: 380 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM--QNKGMIPDT 437
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG---KMPLIIVE 382
+ L G +D A H + + G +E +Y L++ G K +I E
Sbjct: 438 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 497
Query: 383 RMQKD 387
M KD
Sbjct: 498 MMNKD 502
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 132/323 (40%), Gaps = 49/323 (15%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ + + D PD T S ++ ++K +AE ++E+M E G + YN +++
Sbjct: 245 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 304
Query: 90 YISNGQLDKVPQMLQELK------------------------------------KNTSPD 113
Y +G ++ ++ +++ K PD
Sbjct: 305 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 364
Query: 114 VVTYNLWLAACASQNDKETAE-KAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATT 171
+++Y+ L A+ D A+ L TK I P+ ++ L + Y + + +KA
Sbjct: 365 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 424
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
++M+ + + V +++++S +G D+ L + M+ + ++A Y C+I
Sbjct: 425 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 484
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNI-LLAAYINR----NQLEMAESFYNRLVTKGIK 286
GE KA+ + E + D P + ++ IN ++ + + +V G +
Sbjct: 485 HGELVKAKELISEMMN----KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 540
Query: 287 PCYTTWELLTWGYLKKGQMEKVL 309
P T+ L GY G ME+
Sbjct: 541 PNVVTFNSLMEGYCLVGNMEEAF 563
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/334 (17%), Positives = 145/334 (43%), Gaps = 7/334 (2%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
C++++ + K+ +AE++++KM + G Y+ +++ + +DK ++L+++
Sbjct: 228 CNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV 287
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ T P+ +TYN + + + + F ++ + P + ++ K
Sbjct: 288 EAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTN 347
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLY---TNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A M + + + ++YS++L Y T+ D V I+ M++ N +
Sbjct: 348 EAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD-VHNIFNLMLTKGIAPNKHVFN 406
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I++ + G +KA I+++ ++ D ++++ +L+ A +N +V
Sbjct: 407 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
G+ P + L G G++ K E + + P + ++ N L ++G +
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK-DIPPPGVKYFSSIINNLCKEGRVA 525
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ ++ + G + +NSL+ Y G M
Sbjct: 526 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 559
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 154/377 (40%), Gaps = 17/377 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE++ +K PDT + ++ S + + +A M + G Y ++
Sbjct: 424 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 483
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
++G+L K +++ E+ K+ P V Y + + + K +++ +T P+
Sbjct: 484 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 543
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+++++L Y + E+A L M N Y +L+ Y G D+ L +++
Sbjct: 544 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 603
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ K Y+ ++ L + A+ ++ E T ++L N
Sbjct: 604 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 663
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A +L +K T+ ++ K G+ ++ E F S VP+ +
Sbjct: 664 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI--STYGLVPNIQTY 721
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRT------YAKAGKMPLIIVE 382
+ L ++ + A++L +++ +GH S + + N ++R AKA II E
Sbjct: 722 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 781
Query: 383 RMQKDNVQMDAETQKVL 399
+N+ ++A T +L
Sbjct: 782 ----NNLTLEASTISLL 794
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ Y EA AL++ M+ G Y +++ Y NG++D + ++
Sbjct: 545 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 604
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P V Y++ L A+K F E+ ++ +Y + +
Sbjct: 605 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 664
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+++ + + + ++ ++S +G + E ++ + + N Y+ +
Sbjct: 665 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 724
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I++L+K +E+A+N++ E D R+ N ++ +N+ ++ A ++ + + +
Sbjct: 725 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 784
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
+T LL + ++G ++ +
Sbjct: 785 TLEASTISLLASLFSREGMIKGLF 808
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 109/288 (37%), Gaps = 10/288 (3%)
Query: 24 QALQTRAREN----FFENLPDKMRGPDTCS--ALLHSYVQNKKS--AEAEALMEKMSECG 75
AL R N F+++ K PD S +LH Y S A+ + M G
Sbjct: 338 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 397
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAE 134
+N ++N Y G +DK + ++++ K PD VT+ +++ + A
Sbjct: 398 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 457
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY-SSLLSL 193
F + + P Y L KA + EM + V Y SS+++
Sbjct: 458 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 517
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G E I M+ + N + ++ +G E+A + D SI +
Sbjct: 518 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 577
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ L+ Y +++ A + + ++ KG+KP + ++ G +
Sbjct: 578 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 625
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 139/318 (43%), Gaps = 11/318 (3%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD------TCSALLHSYVQNKK 60
HG +Y V +AL R R + MRG T + L+ ++ + +
Sbjct: 4 HGVAPNVYTYNILV---RALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 61 SAEAEALMEKMSECGFLKCPL-PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
AE ++ M E G K L +N M+N G+++ ++ E+ ++ +PDVV+YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
L+ + F E+ + + PD +++++L K E+A + +M +R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
R N V +++L+ + G+ D+ L ++M + + Y +I+ KLG + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E E+ D + +++ Y L+ A +++ KG+ P T+ L G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 299 YLKKGQMEKVLECFKKAI 316
++ ++ E F+ +
Sbjct: 301 LCEEKRLNDACELFENML 318
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 125/278 (44%), Gaps = 4/278 (1%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
AR+ F E + + + PD S LL Y + E+ A+ +M++ G + + + ++
Sbjct: 100 ARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 158
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ G L++ ++ +++ + + VT+ + + + A A E++K I
Sbjct: 159 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 218
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P + Y+ L + Y K+ + A ++EME + + + V YS+++S Y +G D ++
Sbjct: 219 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 278
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+KM+ + Y+ +I L + A +++ + D L+ +
Sbjct: 279 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 338
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+E A S ++ ++ KG+ P T+ +L G K +
Sbjct: 339 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 376
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 40/312 (12%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ +P+V TYN+ + A ++ E A +++ P+ ++Y+TL + + +
Sbjct: 2 VRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR---- 57
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
A L E+ ++SL G AK N + +
Sbjct: 58 ---AGELDGAER------------VVSLMREEGN---------------AKPNLVTFNSM 87
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K G E A ++DE D N LL+ Y L + + ++ + +G+
Sbjct: 88 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 147
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L K G +E+ + + R + TA + ++G +D A
Sbjct: 148 VPDVVTFTSLIHATCKAGNLEQAVALVAQM--RERGLRMNEVTFTALIDGFCKKGFLDDA 205
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVLKIT 402
+ +R G S YN+L+ Y K G+M L ++ M+ V+ D T + I+
Sbjct: 206 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI-IS 264
Query: 403 SEMPVSEVSSIF 414
V + S F
Sbjct: 265 GYCKVGNLDSAF 276
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 16/273 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+AL++ Y + + A L+ +M + Y+ +++ Y G LD Q+ Q+ LK
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 284
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K PD +TY+ + + A + F + + + PD +Y+TL + K EK
Sbjct: 285 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 344
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM------------SLFA 215
A + EM ++ + V YS L++ + E R+ K+ +L
Sbjct: 345 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 404
Query: 216 KMNDAEYTCVISSLVKL---GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ AE+ V++ L G ++A+ +Y + D V +IL+ + +
Sbjct: 405 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 464
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
A SF+ +++ G P T+ L G ++G +
Sbjct: 465 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 497
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 7/303 (2%)
Query: 79 CP---LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAE 134
CP + Y+ ++N + G LDK E L K SP+VVTYN +AA + A
Sbjct: 8 CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAM 67
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ + K+ + PD ++Y+++ + P++A LK+M + V Y+SL+
Sbjct: 68 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 127
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
G E +I+ M K + Y ++ G + + D +
Sbjct: 128 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 187
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
V +IL+ AY + ++E A ++++ +G+ P T+ + K G++E + F++
Sbjct: 188 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 247
Query: 315 AIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
I + PD + + + L + AE L + + + G +ST +NS++ ++ K
Sbjct: 248 MIDEGLR--PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKE 305
Query: 374 GKM 376
G++
Sbjct: 306 GRV 308
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+PD M T ++++H + + + EA ++KM G + YN +++ NG+
Sbjct: 79 MPDCM----TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 134
Query: 98 KVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
+ ++ + K+ PD+ TY L A++ + + I P+ +S L
Sbjct: 135 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 194
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
Y K E E+A +M ++ N V Y +++ + G ++ + +++M+ +
Sbjct: 195 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR 254
Query: 217 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 276
+ Y +I SL ++EKAE ++ E N ++ ++ ++ +
Sbjct: 255 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKL 314
Query: 277 YNRLVTKGIKPCYTTWELLTWG 298
++ +V G+KP +++T G
Sbjct: 315 FDLMVRIGVKP-----DIITLG 331
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 169/415 (40%), Gaps = 47/415 (11%)
Query: 5 RPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEA 64
+PH + + ++++ + + Q + R N F+ + DK D + L+H Y + A
Sbjct: 86 QPHEKEKASNTFKKLIEE-QPKEVRKVVNAFKRI-DKAVERDY-ALLIHYYGKRGDKRGA 142
Query: 65 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAA 123
EKM G YN+++ YI L ++E++ + P+ T++ ++
Sbjct: 143 RVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISG 202
Query: 124 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT---- 179
S + E AEK F + + YS++ Y K E+A + +ME++
Sbjct: 203 YGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEAT 262
Query: 180 -------------CR------------KNR---------VAYSSLLSLYTNMGYKDEVLR 205
C K R V Y L++LYT +G + L
Sbjct: 263 LGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALE 322
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
K+M + +N Y+ ++ V+LG+F A +++++ D NILL A+
Sbjct: 323 FCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFC 382
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA-IGSVRKWVP 324
Q+ A R+ T+G P T+ + G++K G + + + + R P
Sbjct: 383 KSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCR---P 439
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPL 378
+ + L + G ID A ++ + AG + Y +L++ +A G++ L
Sbjct: 440 NATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGL 494
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 152/357 (42%), Gaps = 11/357 (3%)
Query: 51 LLHSYVQNKKSAEAEALMEKMS---ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
L+ Y + A+ + K+ + G + Y ++NLY G++ K + +E+K
Sbjct: 269 LMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMK 328
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ + + TY++ + D A F ++ + I+PDW++Y+ L + K
Sbjct: 329 AQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMT 388
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L M+ R C Y +++ + G + +M + N Y ++
Sbjct: 389 RAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIM 448
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+LV+LG+ ++A ++ DE E + R L+ + + ++ +A R+ K
Sbjct: 449 HNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQK 508
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP-DHRLITAAYNKLEEQGDIDGA 345
P ++ L K G+M+ + ++ + VP ++ + + ++GD+ A
Sbjct: 509 PPIISYASLLKACCKAGRMQNAIAVTEEMAFA---GVPMNNYIFNTLLDGWAQRGDMWEA 565
Query: 346 EHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
++ +R G Y S + KAG M +E M++ ++Q + +T +L
Sbjct: 566 YGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTIL 622
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 1/266 (0%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T S L+ YVQ A A ++ E MSE G + YN +L + + Q+ + Q+L
Sbjct: 337 NTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGR 396
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K + SP + TY + D A K E+K P+ +Y+ + +++
Sbjct: 397 MKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQ 456
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++AA+ + EME + N +Y++L+ + ++G + K++ + K Y
Sbjct: 457 IDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYAS 516
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ + K G + A + +E + + N LL + R + A ++ +G
Sbjct: 517 LLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEG 576
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
P ++ K G M+K E
Sbjct: 577 FTPDIHSYTSFVNACCKAGDMQKATE 602
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 122/299 (40%), Gaps = 9/299 (3%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE++ + PD T + LL ++ ++++ A L+ +M G Y +++ ++
Sbjct: 359 FEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMK 418
Query: 93 NGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G + + + E+K P+ TYN+ + + A E++ + P++ S
Sbjct: 419 TGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRS 478
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + + A LK + + T + ++Y+SLL G + + ++M
Sbjct: 479 YTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMA 538
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
MN+ + ++ + G+ +A I + T D + A ++
Sbjct: 539 FAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQ 598
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRL 328
A + + ++P T+ +L G+ EK L C+ KA G +PD L
Sbjct: 599 KATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAG----LIPDKPL 653
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++H+ VQ + A +++++M G Y ++ + S G++ + L+ +
Sbjct: 443 TYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRV 502
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETA-----EKAFL---------------------- 138
+ T P +++Y L AC + A E AF
Sbjct: 503 NEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDM 562
Query: 139 --------ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
++++ PD SY++ + K +KA T++EM+++ + N Y+ L
Sbjct: 563 WEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTIL 622
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+ +T++ + ++ L + +M + + Y C+++SL+
Sbjct: 623 IHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIVTSLL 662
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 3/275 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + K PD T +A++H+ + EA +E+M+ + Y +++
Sbjct: 33 FLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLC 92
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D+ +L +++K P VTYN ++ A E+ + PD +
Sbjct: 93 KGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFT 152
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + + K + + A +++ R R + V YS L+ G E + ++ +M+
Sbjct: 153 YTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI 212
Query: 212 SLFAKM-NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ M N Y +IS ++G+ ++A N+ + + D L+ + +L
Sbjct: 213 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARL 272
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ A N++ KG+ P T+ L G ++ ++
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 13/297 (4%)
Query: 20 VAQAQALQTRARE--NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECG 75
V A ++ R E F E + ++ P+ T + L+ + + EA AL+ KM +
Sbjct: 52 VIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-- 109
Query: 76 FLKC---PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKE 131
KC + YN +++ + + +L+E+ PD+ TY + +
Sbjct: 110 --KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSL 190
A + F +L PD ++YS L K ++A M K +C N V Y+SL
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+S + MG DE + + ++M + + YT +++ KL + A ++ ++
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
T D L+ N+L A + K P T+ + GY + Q+E+
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 83 YNHMLNLYISNGQLDKVPQ-MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN +L+ Y QL++ + ML+E+ + P+VV++N+ + N A + E +
Sbjct: 329 YNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYK 200
+ + +PD + Y+T+ + + ++A ++M E+ C N + YS+L++ N G
Sbjct: 387 RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGML 446
Query: 201 D 201
D
Sbjct: 447 D 447
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 3/275 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + K PD T +A++H+ + EA +E+M+ + Y +++
Sbjct: 33 FLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLC 92
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D+ +L +++K P VTYN ++ A E+ + PD +
Sbjct: 93 KGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFT 152
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + + K + + A +++ R R + V YS L+ G E + ++ +M+
Sbjct: 153 YTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI 212
Query: 212 SLFAKM-NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ M N Y +IS ++G+ ++A N+ + + D L+ + +L
Sbjct: 213 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARL 272
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ A N++ KG+ P T+ L G ++ ++
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 13/297 (4%)
Query: 20 VAQAQALQTRARE--NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECG 75
V A ++ R E F E + ++ P+ T + L+ + + EA AL+ KM +
Sbjct: 52 VIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-- 109
Query: 76 FLKC---PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKE 131
KC + YN +++ + + +L+E+ PD+ TY + +
Sbjct: 110 --KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR-TCRKNRVAYSSL 190
A + F +L PD ++YS L K ++A M K +C N V Y+SL
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+S + MG DE + + ++M + + YT +++ KL + A ++ ++
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
T D L+ N+L A + K P T+ + GY + Q+E+
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 10/257 (3%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N E + + PD T + L++ + + + +A L+ +M+ G + + +++
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+L +L E++ K+ SP V TYN L N E A K LE + P+
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNV 359
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+S++ + K+ +A ++E +R C + V Y++++ DE R+++K
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 210 MMSLFAKM-NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
M+ + N Y+ +++ L G ++A Y E + G N+L+ A+ N
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRARG-YIEKGCVPNIG---TYNLLIDAFRKAN 475
Query: 269 QLEMAESFYNRLVTKGI 285
+ E A + +V +G
Sbjct: 476 RDEDARELLDDMVQRGF 492
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 50/299 (16%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT-SLYIKMELPEK 167
+ S D VTY + E A ++ PD +Y+ + +L ++ L E
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE- 64
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+EM R N V Y+ L+ G DE + + KM Y +IS
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLIS 123
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVT 282
L K E+A YD E + +G +P+I L+ + + + A + +LV
Sbjct: 124 GLCKA---ERASEAYDLLEEMVYSGC--IPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+G +P T+ L G K+G++++ ++ F + I S +P+
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS-GSCMPN----------------- 220
Query: 343 DGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
T YNSL+ + + GKM + ++ERM + D T L
Sbjct: 221 -----------------TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 154/382 (40%), Gaps = 12/382 (3%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
R+ +A+ L + LP+ + T ++ L + +AEA LM + +
Sbjct: 166 RIDEARELIQEMTRKSCDVLPNII----TYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 221
Query: 79 CP--LPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKA 136
P + ++ +++ GQ D+ + P+VVTYN + + E A
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEACND-DMIAGGYVPNVVTYNALVNGLCKADKMERAHAM 280
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ + PD I+YS L + K ++A L M R C N V ++S++
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
E +I ++ + + + +I+ K G FE+A +++E + + D
Sbjct: 341 SDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMT 400
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
L+ Q+E A + + G+ P T+ +L G K G++E+ E ++ +
Sbjct: 401 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMV 460
Query: 317 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
S VP+ + L D A L+ L++ G T YN L+ K+GK
Sbjct: 461 SS--GCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518
Query: 376 M--PLIIVERMQKDNVQMDAET 395
+ ++E M Q D+ T
Sbjct: 519 TEQAITVLEEMVGKGHQPDSFT 540
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 5/295 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++ DK PD T S L+ ++ + + EA L+ M+ G + +N +++
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339
Query: 92 SNGQLDKVPQM-LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ + + Q+ LQ + PD VT+N+ +A + E A F E+ + PD +
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++ L K E A L M N V Y+ L+ G +E ++M
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+S Y ++ +L + + A + + +S D NIL+ +
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKT 519
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
E A + +V KG +P T+ G + G + +E + + + +PD
Sbjct: 520 EQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVL--AKGMLPD 572
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 127/337 (37%), Gaps = 50/337 (14%)
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ +P +VTYN + N+ + F EL K PD ++Y+TL K E
Sbjct: 74 RDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLE 133
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM--------------- 211
+A M R C N V YS L++ +G DE + ++M
Sbjct: 134 EARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNS 193
Query: 212 ------------------------SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
SL + ++ +I L K G+ ++A N D+
Sbjct: 194 FLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDM-- 249
Query: 248 ISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
I+G P V N L+ +++E A + +V KG+ P T+ +L + K ++
Sbjct: 250 IAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 309
Query: 306 EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YN 364
++ LE + R P+ + + L + A + + + N V ++ +N
Sbjct: 310 DEALELLHGM--ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367
Query: 365 SLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
L+ KAG + E M N+Q D T L
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGAL 404
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 155/359 (43%), Gaps = 10/359 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++ + + ++ EAEAL E++ + G YN +L Y+ G L M+ E+
Sbjct: 308 TLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEM 367
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ SPD TY+L + A + E+A E++ + P+ +S L + Y
Sbjct: 368 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEW 427
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+K LKEM+ + +R Y+ ++ + D + + +M+S + + + +
Sbjct: 428 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 487
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G AE +++ E NI++ +Y ++ + + + ++ ++GI
Sbjct: 488 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 547
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P T L Y K G+ +EC + K++G P + A N ++G +
Sbjct: 548 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG----LKPSSTMYNALINAYAQRGLSE 603
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKVL 399
A + + + G S NSL+ + + +++ M+++ V+ D T L
Sbjct: 604 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 662
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + L+ + ++ + AE + E M G L C YN M+N Y + D
Sbjct: 479 PDRV----TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 534
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ ++L ++K + P+VVT+ + A + E+K + P Y+ L +
Sbjct: 535 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 594
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
Y + L E+A + M + + +A +SL++ + E + + M K
Sbjct: 595 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 654
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDE 244
+ YT ++ +L+++ +F+K +Y+E
Sbjct: 655 DVVTYTTLMKALIRVDKFQKVPGVYEE 681
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 142/345 (41%), Gaps = 23/345 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S L+H+ +++K EA L +K + PL YN ++ N ++K ++ +++
Sbjct: 173 SILIHALGRSEKLYEAFLLSQKQT-----LTPLTYNALIGACARNNDIEKALNLISRMRQ 227
Query: 109 NT-SPDVVTYNLWLAACASQN--DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ D V Y+L + + N D ++ + E+++ K++ D + + + K P
Sbjct: 228 DGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 287
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A L + S++S N G E +++++ K Y +
Sbjct: 288 SRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNAL 347
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ VK G + AE + E E + D ++L+ AY+N + E A + T +
Sbjct: 348 LKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDV 407
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
+P + L GY +G+ +K + K K+IG PD + + G +
Sbjct: 408 QPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGV----KPDRQFYNVVIDTF---GKFN 460
Query: 344 GAEHLLVTLRNAGHVSTE----IYNSLLRTYAKAGKMPLIIVERM 384
+H + T E +N+L+ + K G+ I+ E M
Sbjct: 461 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH--IVAEEM 503
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y ++ + +A +E+M G YN ++N Y G ++ + +
Sbjct: 553 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 612
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P ++ N + A A +K+ + PD ++Y+TL I+++
Sbjct: 613 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 672
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLS 192
+K +EM C+ +R A S L S
Sbjct: 673 QKVPGVYEEMIMSGCKPDRKARSMLRS 699
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 42/310 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A ++ ++ S +AE + ++M + Y ++NLY G+ + E+
Sbjct: 10 NAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALILFHEMTT 69
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL------TSLYIK 161
+ P++ TY + A + E AE+ F ++++ ++PD +Y+ L +S + +
Sbjct: 70 HKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSR 129
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----------- 210
P AA M+ C +R +Y+ L+ Y G++D+ ++K M
Sbjct: 130 AGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKS 189
Query: 211 ----MSLFAKMNDAE----------------YTCVISSLV----KLGEFEKAENIYDEWE 246
S ++KM + T V+ S++ +LG+F K E + E
Sbjct: 190 HMVLQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVME 249
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
S D NIL+ Y +E E F+ L +KG+KP TW Y K
Sbjct: 250 KGSYVADISTYNILINRYGQAGXIERMEDFFQLLPSKGLKPDVVTWTSRMGAYSXKKLYL 309
Query: 307 KVLECFKKAI 316
K LE F++ I
Sbjct: 310 KCLEIFEETI 319
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 120/265 (45%), Gaps = 15/265 (5%)
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
+P + Y+ + +K +KA K M+K C+ Y+ L++LY G L
Sbjct: 3 NPSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALI 62
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
++ +M + K N YT ++++ V+ G EKAE ++++ + D N L+ Y
Sbjct: 63 LFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYK 122
Query: 266 NRNQLEM------AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIG 317
+ A ++ + G +P ++ +L Y K G + FK K +G
Sbjct: 123 FSSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVG 182
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ + H ++ +AY+K+ G+++ E +L + +G ++T + S+L Y + G+
Sbjct: 183 -ITPTMKSHMVLQSAYSKM---GNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQF 238
Query: 377 PLI--IVERMQKDNVQMDAETQKVL 399
+ ++ M+K + D T +L
Sbjct: 239 GKMEEVLRVMEKGSYVADISTYNIL 263
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 14/282 (4%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+P V YN ++ + + AE+ F +KK +Y+ L +LY K A
Sbjct: 3 NPSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALI 62
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI---- 226
EM C+ N Y++L++ + G ++ ++++M + + Y ++
Sbjct: 63 LFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYK 122
Query: 227 --SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
S + G A I+ + + D NIL+ AY + AE+ + + G
Sbjct: 123 FSSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVG 182
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I P + +L Y K G + K E + S K + ++ + N G
Sbjct: 183 ITPTMKSHMVLQSAYSKMGNVNKCEEILNQMCKSGLKL--NTYVLKSMLNLYGRLGQFGK 240
Query: 345 AEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKMPLIIVERMQ 385
E +L + +V+ YN L+ Y +AG +ERM+
Sbjct: 241 MEEVLRVMEKGSYVADISTYNILINRYGQAGX-----IERME 277
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 6/292 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P +VTYN + + A + ++ + PD I+++++ K + A
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
K +R CR N V YS+L+ + M DE L++ KM+ L + N Y+ V+ L+K
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+G E A + + D N L+ + R +L A ++ G P T
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L G + G+ ++ +E + R P+ ++ + L + G + A
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYM--AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 708
Query: 352 LRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+ V+ + Y++L+ KAG++ +ERM + D T +L
Sbjct: 709 MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSIL 760
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
+VTYN+ + A AF + + P ++YST+ + +K L+
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EM R C N V Y++L++ G E + ++M + + +I L K G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
E E A + DE D + +LL A +++ A F+ +++ G P T+
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 294 LLTWGYLKKGQMEK---VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ G K G++E VL+ ++ S P T A + L + G++ GA
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSS-----PTVFTFTIAVDGLSKAGNLTGAYEFFD 235
Query: 351 TLRNAG-HVSTEIYNSLLRTYAKAGKMPLII 380
++ G +T Y++L+ KAGK+ + +
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIAL 266
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 11/302 (3%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN ++ +G + +L+ ++ SPDV+T+N L + A F
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ P+ ++YSTL KM ++A L +M + CR N V YS+++ +G
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 593
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP-- 257
++ + + ++M + Y +I K +A + E + P V
Sbjct: 594 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM--LEAGFHPSVVTY 651
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
L + + A + + +G P T+ + G K G++ + L F+K
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM-- 709
Query: 318 SVRKWVPDHRLI--TAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
R V +I +A + L + G ID A L + AG + + ++ L+ AG
Sbjct: 710 -ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768
Query: 375 KM 376
++
Sbjct: 769 RI 770
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 7/267 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++ + + +A K + GF + Y+ +++ + ++DK ++L+E+
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ +P+ VTYN + A Q + A + P+ I++ + K
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E A + EM R + ++ LL +G DE +++++ + + Y +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 226 ISSLVKLGEFEKAENIYDEW-ESISGTGDPRVPNILLA--AYINRNQLEMAESFYNRLVT 282
+ L K G E A + ES S P V +A L A F++ +
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFS---SPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVL 309
G+ P T++ L G K G+++ L
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIAL 266
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 120/310 (38%), Gaps = 42/310 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ LLH+ + + EA +++ GF + YN M++ G+L+ +LQ L +
Sbjct: 145 TVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAE 204
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +SP V T+ + + + + A + F + +T + P+ ++Y L K +
Sbjct: 205 SFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDI 264
Query: 168 AATTLKE-----------------------------MEKRTCRKNRVAYSSLLSLYTNMG 198
A L++ ++ C N V ++SL++
Sbjct: 265 ALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQAR 324
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
DE ++ M + Y ++ L KL +A + G PN
Sbjct: 325 RVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCS----PN 380
Query: 259 I-----LLAAYINRNQLEMAESFYNRLV-TKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ L+ N ++ A Y R+V +GI P T+ L G K G ++ +CF
Sbjct: 381 VVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCF 440
Query: 313 KKAIGSVRKW 322
++ + R+W
Sbjct: 441 EQMLE--REW 448
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 96/237 (40%), Gaps = 41/237 (17%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
HG ++A R+ +A + +F ++P+ R + + L+ S V +++S +A
Sbjct: 827 HGIVIKALCGNDRIDEAVS--------YFHSIPEDCRDEISYNTLITSLVASRRSEQALE 878
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 125
L+ M G Y +++ G + ++LQE++ + SPD+ TY + ++ +
Sbjct: 879 LLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLS 938
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME---------------------- 163
A F E+ + + PD I YS+L + K +
Sbjct: 939 KAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYS 998
Query: 164 ----------LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+KA ++EM+ + C ++SL + Y G DE +++ +
Sbjct: 999 TMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 114/265 (43%), Gaps = 10/265 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A++++Y + + A AL+E+M G K + + ++ N ++D+ + +
Sbjct: 793 NAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE 852
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ D ++YN + + + E A + + PD +Y T+ K PE A
Sbjct: 853 DCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVA 911
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
A L+EM R + Y+ ++S + +++M+ K + Y+ +I +
Sbjct: 912 AKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDA 971
Query: 229 LVKLGEFEKAENIYDEWESISGTG-DPRVP--NILLAAYINRNQLEMAESFYNRLVTKGI 285
F KA+ + D W+ + +G +P + + ++ + + A + +K
Sbjct: 972 ------FCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNC 1025
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLE 310
+P W L Y+ +G++++ ++
Sbjct: 1026 EPGIHIWTSLATAYVAEGRVDEAVK 1050
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/296 (17%), Positives = 117/296 (39%), Gaps = 37/296 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQMLQ 104
T S+++ + + EA EKM+ + P + Y+ +++ G++D+ + L+
Sbjct: 685 TYSSIVDGLCKAGRVTEALGYFEKMARDEVVA-PHVIAYSALIDGLCKAGRIDEAYEFLE 743
Query: 105 E-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
++ PDVVT+++ + +T + F + + D +Y+ + + Y
Sbjct: 744 RMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKG 803
Query: 164 LPEKAATTLKEME---------------KRTCRKNR------------------VAYSSL 190
A L+EM+ K C +R ++Y++L
Sbjct: 804 EFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTL 863
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
++ ++ L + + M++ + Y V+ L K G E A + E S
Sbjct: 864 ITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH 923
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
+ D R I+++ QL +A ++ ++ K +KP + L + K +++
Sbjct: 924 SPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/333 (16%), Positives = 131/333 (39%), Gaps = 10/333 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S ++ ++ + + L+E+M+ G + YN ++N + G+ + +L+ +
Sbjct: 38 TYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM 97
Query: 107 KKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
N P+++T+ L + + + E A + E+ PD ++ L ++
Sbjct: 98 AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRV 157
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A +++ + V Y++++ G + + + + F+ +T
Sbjct: 158 DEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIA 217
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L K G A +D + + + L+ +L++A L K
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNS 274
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
+ + L G + ++E+ ++ K VP+ + N L + +D A
Sbjct: 275 QAGMFAFSSLLHGLCQAHRLEEAIQLLKAM-----PCVPNVVCFNSLMNGLCQARRVDEA 329
Query: 346 EHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP 377
L ++ +G + I YN LL+ K ++P
Sbjct: 330 FELFDVMKESGCSADVITYNILLKGLCKLRRIP 362
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-K 108
AL ++ + A+ KM G +N M+ + +G++D + +++K +
Sbjct: 120 ALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSR 179
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
SPDVVTYN + C + AEK F+E+K I+P ++Y+TL Y+ ++ A
Sbjct: 180 EISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDA 239
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF-AKMNDAEYTCVIS 227
++EM+ + N + YS+LL N G E I K+M+ + A +++ + +IS
Sbjct: 240 LRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLIS 299
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI-- 285
S + G + A ++ +S + +L+ + Q + A ++L+ K I
Sbjct: 300 SQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDKLIEKDIIL 359
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE----QGD 341
+P T ME +AYN + E G
Sbjct: 360 RPQSTL------------HME-----------------------PSAYNPMIEYLCSNGQ 384
Query: 342 IDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK-------MPLIIVERMQKDNVQMDAE 394
AE L+ L G T N+L+R YA+ G + +++ ++ + DA
Sbjct: 385 TAKAEALVRQLLKLGVQDTTALNTLIRGYAQEGSPDSAFELLKIMLRRKVDSEKSAYDAL 444
Query: 395 TQKVLK 400
Q LK
Sbjct: 445 VQSYLK 450
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I S K G +++ ++ + E + + + L + R + MA+ ++N+++
Sbjct: 83 WVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKML 142
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
++GI+P T+ ++ WG+ G+M+ + F+ R+ PD N
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDM--KSREISPDVVTYNTMINGCYRVKK 200
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKV 398
+D AE V ++ T + Y +L++ Y ++ L +VE M+ ++ +A T
Sbjct: 201 MDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYST 260
Query: 399 L 399
L
Sbjct: 261 L 261
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 111/283 (39%), Gaps = 13/283 (4%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FFE++ + PD T + +++ + KK EAE +M + Y ++ Y+
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYV 231
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP-DW 149
S Q+ ++++E+K P+ +TY+ L + A+ E+ I P D
Sbjct: 232 SVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDN 291
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ L S + + AA LK M + + Y L+ + G D +++ K
Sbjct: 292 SIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDK 351
Query: 210 MM--------SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++ M + Y +I L G+ KAE + + + G D N L+
Sbjct: 352 LIEKDIILRPQSTLHMEPSAYNPMIEYLCSNGQTAKAEALVRQLLKL-GVQDTTALNTLI 410
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
Y + A ++ + + + ++ L YLKK +
Sbjct: 411 RGYAQEGSPDSAFELLKIMLRRKVDSEKSAYDALVQSYLKKNE 453
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%)
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
P YN M+ SNGQ K ++++L K D N + A + ++A +
Sbjct: 369 PSAYNPMIEYLCSNGQTAKAEALVRQLLKLGVQDTTALNTLIRGYAQEGSPDSAFELLKI 428
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
+ + K+D + +Y L Y+K P A L M
Sbjct: 429 MLRRKVDSEKSAYDALVQSYLKKNEPADAKAALDSM 464
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 149/335 (44%), Gaps = 6/335 (1%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T + ++++ + + EA +++ + + G + +N +++ I G +D +++++
Sbjct: 164 NTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRK 223
Query: 106 LKK----NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
++ + PD VTYN ++ + AE+ E+ +I+P+ +Y+TL Y +
Sbjct: 224 MEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTR 283
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ E A E+ ++ N V Y+S++ + G + + M+ +
Sbjct: 284 VGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFT 343
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ VI L + G +A +S D N+++ N L A+ +
Sbjct: 344 YSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMY 403
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G+ P T+ L + K G++E ++ ++K I + K P+ + + N ++G
Sbjct: 404 VRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEK--PNLLIYNSVINGFAKEGS 461
Query: 342 IDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 376
D A L+ TLR G YN+L+ Y GK+
Sbjct: 462 FDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKI 496
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 119/297 (40%), Gaps = 41/297 (13%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
++ DK PD T S ++ +N EA ++ + E ++ +N ++N
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLC 387
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ L Q+L + + PDVVT+ + E A + + ++ KT P+ +
Sbjct: 388 RSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLL 447
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y+++ + + K E A L + +R + V Y++L+ Y N G D+ ++ +M
Sbjct: 448 IYNSVINGFAK-EGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEM 506
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + Y +I+SL K G +A+ +
Sbjct: 507 RNSGILASHVTYNTLINSLCKAGHVLQAKELM---------------------------- 538
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+V +G+ P Y T+ +L + KK E+V+E + ++ VPD +
Sbjct: 539 -------KMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMV--LKGVVPDRQ 586
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 141/338 (41%), Gaps = 9/338 (2%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P AL+ + Q + A ++ K+ GF +N+ L+ + +++ +M +
Sbjct: 93 PAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYK 152
Query: 105 ELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
E+ +V T+NL + A + A KT I P+ ++++ + IKM
Sbjct: 153 EMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMG 212
Query: 164 LPEKAATTLKEMEKR---TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ A +++ME + + + V Y+S ++ + +G K+M+ + N
Sbjct: 213 AMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVR 272
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y ++ ++G E A + DE + + N ++ +E A + +
Sbjct: 273 TYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDM 332
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQ 339
+ K I P T+ ++ G + G + + + + + S+ + H ++ N L
Sbjct: 333 IDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVI---NYLCRS 389
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++ GA+ LL + G V + + +L+ + K GK+
Sbjct: 390 NNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKV 427
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 9/305 (2%)
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ +G++DK + E+ ++ P ++ N + + + AE ++ + I PD
Sbjct: 144 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 203
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS + K + +KA L++M + R N + Y+SL+ Y+ G +E +R++K
Sbjct: 204 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 263
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M S I +L K G +A+ I+D D + +L Y
Sbjct: 264 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 323
Query: 269 QLEMAE--SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+A+ + +N ++TKGI P + +L Y + G M+K + F+ + +PD
Sbjct: 324 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM--QNKGMIPDT 381
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG---KMPLIIVE 382
+ L G +D A H + + G +E +Y L++ G K +I E
Sbjct: 382 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 441
Query: 383 RMQKD 387
M KD
Sbjct: 442 MMNKD 446
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 132/323 (40%), Gaps = 49/323 (15%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ + + D PD T S ++ ++K +AE ++E+M E G + YN +++
Sbjct: 189 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 248
Query: 90 YISNGQLDKVPQMLQELK------------------------------------KNTSPD 113
Y +G ++ ++ +++ K PD
Sbjct: 249 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 308
Query: 114 VVTYNLWLAACASQNDKETAE-KAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATT 171
+++Y+ L A+ D A+ L TK I P+ ++ L + Y + + +KA
Sbjct: 309 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 368
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
++M+ + + V +++++S +G D+ L + M+ + ++A Y C+I
Sbjct: 369 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 428
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNI-LLAAYINR----NQLEMAESFYNRLVTKGIK 286
GE KA+ + E + D P + ++ IN ++ + + +V G +
Sbjct: 429 HGELVKAKELISEMMN----KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 484
Query: 287 PCYTTWELLTWGYLKKGQMEKVL 309
P T+ L GY G ME+
Sbjct: 485 PNVVTFNSLMEGYCLVGNMEEAF 507
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 147/336 (43%), Gaps = 11/336 (3%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
C++++ + K+ +AE++++KM + G Y+ +++ + +DK ++L+++
Sbjct: 172 CNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV 231
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ T P+ +TYN + + + + F ++ + P + ++ K
Sbjct: 232 EAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTN 291
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLY---TNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A M + + + ++YS++L Y T+ D V I+ M++ N +
Sbjct: 292 EAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD-VHNIFNLMLTKGIAPNKHVFN 350
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I++ + G +KA I+++ ++ D ++++ +L+ A +N +V
Sbjct: 351 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV--PDHRLITAAYNKLEEQGD 341
G+ P + L G G++ K E + + K + P + ++ N L ++G
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMM---NKDIPPPGVKYFSSIINNLCKEGR 467
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ + ++ + G + +NSL+ Y G M
Sbjct: 468 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 503
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 154/377 (40%), Gaps = 17/377 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE++ +K PDT + ++ S + + +A M + G Y ++
Sbjct: 368 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 427
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
++G+L K +++ E+ K+ P V Y + + + K +++ +T P+
Sbjct: 428 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 487
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+++++L Y + E+A L M N Y +L+ Y G D+ L +++
Sbjct: 488 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 547
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ K Y+ ++ L + A+ ++ E T ++L N
Sbjct: 548 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 607
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A +L +K T+ ++ K G+ ++ E F S VP+ +
Sbjct: 608 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI--STYGLVPNIQTY 665
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRT------YAKAGKMPLIIVE 382
+ L ++ + A++L +++ +GH S + + N ++R AKA II E
Sbjct: 666 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 725
Query: 383 RMQKDNVQMDAETQKVL 399
+N+ ++A T +L
Sbjct: 726 ----NNLTLEASTISLL 738
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ Y EA AL++ M+ G Y +++ Y NG++D + ++
Sbjct: 489 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 548
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P V Y++ L A+K F E+ ++ +Y + +
Sbjct: 549 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 608
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+++ + + + ++ ++S +G + E ++ + + N Y+ +
Sbjct: 609 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 668
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I++L+K +E+A+N++ E D R+ N ++ +N+ ++ A ++ + + +
Sbjct: 669 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 728
Query: 286 KPCYTTWELLTWGYLKKGQMEKVL 309
+T LL + ++G ++ +
Sbjct: 729 TLEASTISLLASLFSREGMIKGLF 752
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 115/305 (37%), Gaps = 10/305 (3%)
Query: 24 QALQTRAREN----FFENLPDKMRGPDTCS--ALLHSYVQNKKS--AEAEALMEKMSECG 75
AL R N F+++ K PD S +LH Y S A+ + M G
Sbjct: 282 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 341
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAE 134
+N ++N Y G +DK + ++++ K PD VT+ +++ + A
Sbjct: 342 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 401
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY-SSLLSL 193
F + + P Y L KA + EM + V Y SS+++
Sbjct: 402 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 461
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G E I M+ + N + ++ +G E+A + D SI +
Sbjct: 462 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 521
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ L+ Y +++ A + + ++ KG+KP + ++ G + + + F
Sbjct: 522 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 581
Query: 314 KAIGS 318
+ I S
Sbjct: 582 EMIES 586
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 139/336 (41%), Gaps = 15/336 (4%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL + +N K A+ L+ +MS G + Y +++ G + + +EL
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----REL 238
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ P V YN + ++D + A + E+ + I P+ ISYSTL ++ E
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA-KMNDAEYTCV 225
A + L +M KR C N SSL+ G + L +W +M+ F + N Y +
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ G KA +++ E I + + R L+ + R L+ A +N+++T G
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 286 KP---CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
P YT + K + E ++E I S P A L + G +
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIE-----IMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 343 DGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
D AE + + I YN LL AKA ++
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 7/264 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELK 107
+AL++ + A LM +M E G + Y+ ++N+ ++GQ++ L Q LK
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPDWISYSTLTSLYIKMELPE 166
+ P++ T + + C + A + + ++ + P+ ++Y+TL +
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA + ME+ C N Y SL++ + G D + IW KM++ N YT ++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKG 284
+L + +F++AE++ + + P VP N + + +L+ AE + ++ +
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCA--PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 285 -IKPCYTTWELLTWGYLKKGQMEK 307
P T+ L G K ++E+
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEE 511
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 128/342 (37%), Gaps = 51/342 (14%)
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK--------------------------- 108
F PL + M+ +GQ+D V +LQ++K
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 109 ---------NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 159
P V YN L +N + + ++K+ +P+ +Y+ L
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K + A L EM + C + V+Y++++S +G E + ++ + +
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV--- 248
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y +I+ L K +++ A + E + + + L+ N Q+E+A SF +
Sbjct: 249 --YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE- 338
++ +G P T L G +G L+ + + I P+ AYN L +
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF-GLQPN----VVAYNTLVQG 361
Query: 339 ---QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
G+I A + + G + Y SL+ +AK G +
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/247 (17%), Positives = 98/247 (39%), Gaps = 2/247 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
+ YN ++ + S+G + K + +++ SP++ TY + A + + A + +
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ + P+ + Y+ + + ++A + ++ M K C + +++ + + G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 200 KDEVLRIWKKMMSLF-AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
D +++++M N Y ++ L K E+A + E N
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LL N +A +++ G P T ++ Y K+G+ E+ +
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592
Query: 319 VRKWVPD 325
RKW PD
Sbjct: 593 RRKWRPD 599
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 128/275 (46%), Gaps = 4/275 (1%)
Query: 40 DKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
+K PD+ +AL++++ ++ +A+ +++KM E G YN ++ Y G+ D
Sbjct: 135 EKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD 194
Query: 98 KVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 155
+ ++L + + N P++ TYN+ + A + A ++ + + PD ++++T+
Sbjct: 195 ESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTI 254
Query: 156 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
+ Y + +A + EM++ + + N + ++S Y G E LR +M L
Sbjct: 255 ATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGM 314
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 275
+ N +++ V + + + + + E D + ++ A+ LE +
Sbjct: 315 QPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKE 374
Query: 276 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
YN ++ G+KP + +L GY++ +MEK E
Sbjct: 375 IYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEE 409
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 11/254 (4%)
Query: 13 AQSYRQ--RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
A +Y Q + AQA+A+ + N + P++ TC+ ++ Y + K EA + +
Sbjct: 255 ATAYAQNGKTAQAEAMILEMQRNSLK--PNE----RTCTIIISGYCREGKVQEALRFVYR 308
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQND 129
M + G + N ++N ++ D V ++L+ +++ PDV+TY+ + A +
Sbjct: 309 MKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGF 368
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
E ++ + + K+ + PD +YS L Y++ + EKA L M K N V +++
Sbjct: 369 LEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTT 428
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
++S + ++G D +R++ KM N + +I + + KAE + E
Sbjct: 429 VISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFH 488
Query: 250 GTGDPRVPNILLAA 263
P+ ILL A
Sbjct: 489 --VQPKKSTILLVA 500
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 141/322 (43%), Gaps = 13/322 (4%)
Query: 86 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 144
++N+ I +G+ + + Q L + P + TY L A +Q + +++ +
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 137
Query: 145 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 204
+ PD I ++ L + + + E A +++M++ + + Y++L+ Y G DE +
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESM 197
Query: 205 RIWKKMMSLF-AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
++ M + K N Y +I +L K+ +A N+ + + D N + A
Sbjct: 198 KLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATA 257
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF--KKAIGSVRK 321
Y + AE+ + +KP T ++ GY ++G++++ L K +G
Sbjct: 258 YAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLG---- 313
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKMPLI 379
P+ ++ + N + D DG + +L L + ++ Y++++ +++AG +
Sbjct: 314 MQPNLIVLNSLVNGFVDMMDRDGVDEVL-KLMEEFQIRPDVITYSTIMNAWSQAGFLEKC 372
Query: 380 --IVERMQKDNVQMDAETQKVL 399
I M K V+ DA +L
Sbjct: 373 KEIYNNMLKSGVKPDAHAYSIL 394
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 38/263 (14%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + + +Y QN K+A+AEA++ +M +++ Y G++ + +
Sbjct: 246 PDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRF 305
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ +K P+++ N + D++ ++ +++ +I PD I+YST+ + + +
Sbjct: 306 VYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQ 365
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
EK M K + + AYS L Y ++ + M N
Sbjct: 366 AGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVI 425
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+T VIS +G + A ++D +M E
Sbjct: 426 FTTVISGWCSVGRMDNAMRVFD---------------------------KMGEF------ 452
Query: 282 TKGIKPCYTTWELLTWGYLKKGQ 304
G+ P T+E L WGY + Q
Sbjct: 453 --GVSPNLKTFETLIWGYAEAKQ 473
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 14/334 (4%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP--LPYNHMLNLYISNGQLDKVPQM 102
P C+AL+ + ++AEA ++ P + YN M+ Y GQLD ++
Sbjct: 94 PGPCAALIKKLCASGRTAEARRVLAACE-------PDVMAYNAMVAGYCVTGQLDAARRL 146
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ ++ PD TYN + + A ++ + PD ++Y+ L K
Sbjct: 147 VADMP--MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKR 204
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++A L EM + C + + Y+ +++ G D+ + K + S + N Y
Sbjct: 205 SGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSY 264
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
V+ L +E AE + E + N+L++ R +E A +++
Sbjct: 265 NIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPK 324
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G P ++ + + K+ +M++ + + + R PD L G++
Sbjct: 325 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS--RGCYPDIVSYNTLLTALCRGGEV 382
Query: 343 DGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
D A LL L++ G I YN+++ KAGK
Sbjct: 383 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 132/298 (44%), Gaps = 7/298 (2%)
Query: 24 QALQTRARE-NFFENLPDKMRG---PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
+ L R R N L D +R PD T + LL + + +A L+++M G
Sbjct: 164 RGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCA 223
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN ++N G++D + L+ L + P+ V+YN+ L + E AEK
Sbjct: 224 PDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKL 283
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
E+ + P+ ++++ L S + L E A L ++ K C N ++Y+ +L +
Sbjct: 284 MAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCK 343
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
D + + M+S + Y ++++L + GE + A + + + T
Sbjct: 344 QKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 403
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
N ++ + + A N +VTKG++P T+ ++ G ++ ++E+ + F K
Sbjct: 404 YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 145/318 (45%), Gaps = 13/318 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F ++LP P+T S +L ++ +AE LM +MS+ G+ + +N +++
Sbjct: 248 FLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLC 307
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDW 149
G ++ ++L ++ K +P+ ++YN L A Q + A AF+EL ++ PD
Sbjct: 308 RRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA-MAFVELMVSRGCYPDI 366
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+SY+TL + + + A L +++ + C ++Y++++ T G E L + +
Sbjct: 367 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNE 426
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M++ + + Y+ + S L + E+A + + + + + + N +L R +
Sbjct: 427 MVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRE 486
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
A + +++ G P +T+ +L G +G +++ E + + V LI
Sbjct: 487 THNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL---CSRGVVSKGLI 543
Query: 330 TAAYNKLEEQGDIDGAEH 347
A +L +DG H
Sbjct: 544 NKAAIRL-----LDGTTH 556
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 26/362 (7%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY---NHMLN 88
+ + D PDT S LL YV N+K EA +L +M+E KCPL N M++
Sbjct: 262 LLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEA---KCPLDLTTCNIMID 318
Query: 89 LYISNGQLDKVPQMLQEL-----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+Y GQL +P+ L K P+VV+YN L + A F ++
Sbjct: 319 VY---GQL-HMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSK 374
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ + ++Y+T+ ++Y K EKA ++EM+KR N + YS+++S++ G D
Sbjct: 375 DVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRA 434
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++K+ S ++++ Y +I + + G A+ + E + PR I + A
Sbjct: 435 AILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI--PRDTAIGILA 492
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
R + E F + +K + + + + K + V+E F+K V +
Sbjct: 493 RAGRIE-EATWVFRQAFDAREVKDI-SVFGCMINLFSKNKKYGNVVEVFEKM--RVVGYF 548
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLIIVE 382
PD +I N + + D A+ L + G V E++ +L Y + ++VE
Sbjct: 549 PDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLY--GARKDFVMVE 606
Query: 383 RM 384
+
Sbjct: 607 SL 608
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 153/337 (45%), Gaps = 22/337 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ LL + ++ K+ A L ++M + G Y+ ++ + +G D LQ++++
Sbjct: 139 NVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFWLQQMEQ 198
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N S D+V Y+ + +D A F LK + I PD I+Y+++ +++ K +L +
Sbjct: 199 DNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFRE 258
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE-----Y 222
A L+EM + + V+YS+LL++Y + E L SLF +MN+A+
Sbjct: 259 ARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEAL-------SLFFEMNEAKCPLDLT 311
Query: 223 TC--VISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYN 278
TC +I +L ++A+ ++ W P V N LL Y + A +
Sbjct: 312 TCNIMIDVYGQLHMPKEADRLF--WSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFR 369
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+ +K ++ T+ + Y K + EK ++ R P+ + + E+
Sbjct: 370 LMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEM--KKRGIEPNAITYSTIISIWEK 427
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
G +D A L LR++G + +Y +++ Y +AG
Sbjct: 428 AGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAG 464
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 133/321 (41%), Gaps = 42/321 (13%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
SP + YN+ L A F E+++ + PD +YSTL + + K L + +
Sbjct: 132 SPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLF 191
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK---------------MMSLFA 215
L++ME+ + V YS+L+ L + + + I+ + M+++F
Sbjct: 192 WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFG 251
Query: 216 K-------------MND-------AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
K M D Y+ +++ V +F +A +++ E D
Sbjct: 252 KAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLT 311
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 315
NI++ Y + + A+ + + GI+P ++ L Y + + + F+
Sbjct: 312 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLM 371
Query: 316 IG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
V++ V + + Y K E + A +L+ ++ G I Y++++ + KA
Sbjct: 372 QSKDVQQNVVTYNTMINIYGKTLEH---EKATNLIQEMKKRGIEPNAITYSTIISIWEKA 428
Query: 374 GKM--PLIIVERMQKDNVQMD 392
GK+ I+ ++++ V++D
Sbjct: 429 GKLDRAAILFQKLRSSGVRID 449
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNT--SPDVVTYNLWL-AACASQNDKETAEKAFLE 139
+N + + +G L+ +++E+KK++ P+++TY+ + C S KE E
Sbjct: 193 FNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEM 252
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
+ K +I PD ++Y+ L + + ++A ++ M+ C N YS+L+S + G
Sbjct: 253 VSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGR 312
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+E + +++M K + YT +I+ + G ++A + +E + D N+
Sbjct: 313 LEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNV 372
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
LL + + E A NRL ++GI ++ ++ +KG ++K LE +
Sbjct: 373 LLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLS-- 430
Query: 320 RKWVPDH 326
R +VP H
Sbjct: 431 RGFVPHH 437
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 2/252 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKM-SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T S L+ ++ + EA L E+M S+ L L YN ++N + G++D+ ++++
Sbjct: 228 TYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEF 287
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K N SP+V Y+ ++ + E A AF E+K + D + Y+ L + + +
Sbjct: 288 MKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGR 347
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A L+EM++ C+ + V + LL + G +E L + ++ S +N A Y
Sbjct: 348 IDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRI 407
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
V++SL + G+ +KA + S N LL + A L G
Sbjct: 408 VLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMG 467
Query: 285 IKPCYTTWELLT 296
KP +W LL
Sbjct: 468 FKPEQDSWALLV 479
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 124/272 (45%), Gaps = 4/272 (1%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP-YNHMLNLYISNGQLDKVPQMLQ 104
DT ++ Y + +K EA EKMS G LK L YN ++++ + Q+ K + +
Sbjct: 196 DTFRLIVRRYARARKVKEAVETFEKMSSFG-LKADLSDYNWLIDVLSKSKQVKKAHAIFK 254
Query: 105 ELKKNTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
E+K+N PD+ TY + + + D + + E+ I PD ++Y TL S + K
Sbjct: 255 EMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKS 314
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++A +EME C + Y L++ + DE L+ ++ + M
Sbjct: 315 GKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTC 374
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
V+ + + +F+ A + DE + R +I+L I ++E A + + R+
Sbjct: 375 NAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGM 434
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+G +P T+ ++ + +++ L+ +K+
Sbjct: 435 EGCEPQLNTYTMMVGMFCSNERVDMALKVWKQ 466
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Query: 32 ENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
++ ++ + D PD + L+ S+ ++ K EA + +M G + P Y ++N
Sbjct: 286 KSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLING 345
Query: 90 YISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
S +LD+ + + K + P +V T N + A + + A K E++KT I P+
Sbjct: 346 LGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPN 405
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+Y + IK + E+A + M C Y+ ++ ++ + D L++WK
Sbjct: 406 ARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWK 465
Query: 209 KM 210
+M
Sbjct: 466 QM 467
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 121/266 (45%), Gaps = 3/266 (1%)
Query: 104 QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
Q L KN PDV T+N+ + + + + A + K +D + ++Y++L Y ++
Sbjct: 264 QMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVK 323
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
KA M +R + +YS +++ DE + ++K+M S N Y
Sbjct: 324 QENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYN 383
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I L+K G A ++ +E + D + LL A +Q++ A + ++ +
Sbjct: 384 SLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQ 443
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GI+P T+ +L G K G+++ ++ + ++ + D ++ N L ++G D
Sbjct: 444 GIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL--IKGYHLDVKMYNVMVNGLCKEGLFD 501
Query: 344 GAEHLLVTLRNAGHVSTEI-YNSLLR 368
A L+ + + G + + Y +L+R
Sbjct: 502 EALSLVSKMEDNGCIPDAVTYETLVR 527
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 115/275 (41%), Gaps = 3/275 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + +A ++ M + G + YN +++ Y Q +K +
Sbjct: 272 PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFV 331
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ ++ +PDV +Y++ + + A F E+ + P+ ++Y++L +K
Sbjct: 332 FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
A + EM R + + YSSLL D+ + + K+ + N
Sbjct: 392 YGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYT 451
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
YT ++ L K G + A+ +Y + D ++ N+++ + A S +++
Sbjct: 452 YTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKME 511
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
G P T+E L + + +K ++ ++ I
Sbjct: 512 DNGCIPDAVTYETLVRALFENDKNDKAVKLLREMI 546
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/361 (18%), Positives = 148/361 (40%), Gaps = 8/361 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L++ + A +++ K+ + GF + ++ NG++ +
Sbjct: 97 PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156
Query: 103 LQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ + K D V+Y + + A + ++ + P+ + Y+T+ K
Sbjct: 157 HDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCK 216
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+L A+ EM + + V Y++L+ +G E + ++ +M+ K +
Sbjct: 217 DKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYT 276
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ L K GE +KA N+ + N L+ Y Q A +N +
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA 336
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G+ P ++ ++ G K +++ + FK+ + P+ + + L + G
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEM--HSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKV 398
I A L+ + N G + I Y+SLL K ++ + ++ +++ +Q + T +
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 399 L 399
L
Sbjct: 455 L 455
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 98/239 (41%), Gaps = 1/239 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ Y K+ +A + M+ G Y+ M+N +D+ + +E+
Sbjct: 311 TYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEM 370
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ +P+ VTYN + A E+ D I+YS+L K
Sbjct: 371 HSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQV 430
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA T + +++ + + N Y+ L+ G + +++ ++ ++ Y +
Sbjct: 431 DKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVM 490
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L K G F++A ++ + E D L+ A ++ + A ++ +G
Sbjct: 491 VNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 47/435 (10%)
Query: 4 RRPHGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDT--CSALLHSYVQNKKS 61
R+ +G V+ Y +R A QT FE++ + P + S+L+H+Y +
Sbjct: 274 RKEYGLMVK--YYARRGDMHHARQT------FESMQARGIEPSSHVYSSLIHAYAVGRDM 325
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLW 120
EA + KM E G + Y+ ++ + G+ D +E K K S + VTY
Sbjct: 326 EEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSI 385
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
+ A + + AE E++ ID Y T+ Y + EK +++
Sbjct: 386 IYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGF 445
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ ++Y L++LYT +G + L+I K M K N Y+ +I+ +KL ++ A +
Sbjct: 446 SPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFS 505
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+++++ D + N ++ A+ + ++ A ++ + +P T+ + G+
Sbjct: 506 VFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFA 565
Query: 301 KKGQMEKVLECFK----------------------------KAIG-----SVRKWVPDHR 327
+ G+M + LE F KA+ +V P+
Sbjct: 566 RAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEH 625
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERM 384
T GD + A LRN G + Y +LL++ K+G+M L + + M
Sbjct: 626 TYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 685
Query: 385 QKDNVQMDAETQKVL 399
N+ + +L
Sbjct: 686 SAKNIPRNTFVYNIL 700
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ALL S ++ + A A+ ++MS + YN +++ + G + + ++Q++
Sbjct: 661 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 720
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K PD+ TY ++ AC D + A + E++ I P+ +Y+TL + + + +P
Sbjct: 721 RKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMP 780
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLL-SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
EKA + +EM+ + ++ AY L+ SL + + ++ ++S+ +M ++E T
Sbjct: 781 EKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSY--VYSGLLSVCREMIESEMTV 838
Query: 225 VISSLV 230
+ + V
Sbjct: 839 DMGTAV 844
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 97/265 (36%), Gaps = 36/265 (13%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++H + + + A + + M G + YN ++ + ++ K +L ++
Sbjct: 560 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAG 619
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ TY + AS D E A + F L+ ++ D +Y L K + A
Sbjct: 620 VGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSAL 679
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
KEM + +N Y+ L+ + G E + ++M + YT +++
Sbjct: 680 AVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNAC 739
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G+ +KA I E E+ GIKP
Sbjct: 740 CKAGDMQKATEIIQEMEAF-----------------------------------GIKPNL 764
Query: 290 TTWELLTWGYLKKGQMEKVLECFKK 314
T+ L G+ + EK L CF++
Sbjct: 765 KTYTTLINGWARASMPEKALSCFEE 789
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 139/318 (43%), Gaps = 11/318 (3%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD------TCSALLHSYVQNKK 60
HG +Y V +AL R R + MRG T + L+ ++ + +
Sbjct: 146 HGVAPNVYTYNILV---RALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202
Query: 61 SAEAEALMEKMSECGFLKCPL-PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
AE ++ M E G K L +N M+N G+++ ++ E+ ++ +PDVV+YN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
L+ + F E+ + + PD +++++L K E+A + +M +R
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
R N V +++L+ + G+ D+ L ++M + + Y +I+ KLG + A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E E+ D + +++ Y L+ A +++ KG+ P T+ L G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 299 YLKKGQMEKVLECFKKAI 316
++ ++ E F+ +
Sbjct: 443 LCEEKRLNDACELFENML 460
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 125/278 (44%), Gaps = 4/278 (1%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
AR+ F E + + + PD S LL Y + E+ A+ +M++ G + + + ++
Sbjct: 242 ARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 300
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ G L++ ++ +++ + + VT+ + + + A A E++K I
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P + Y+ L + Y K+ + A ++EME + + + V YS+++S Y +G D ++
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+KM+ + Y+ +I L + A +++ + D L+ +
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+E A S ++ ++ KG+ P T+ +L G K +
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 147/369 (39%), Gaps = 42/369 (11%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKK 108
AL+ SY + + A A + + G+ YN +L L +S+ L + L L+
Sbjct: 88 ALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVL-LALSDASLPSARRFLSSMLRH 146
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+P+V TYN+ + A ++ E A +++ P+ ++Y+TL + + +
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR------- 199
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
A L E+ ++SL G AK N + +++
Sbjct: 200 AGELDGAER------------VVSLMREEGN---------------AKPNLVTFNSMVNG 232
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L K G E A ++DE D N LL+ Y L + + ++ + +G+ P
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L K G +E+ + + R + TA + ++G +D A
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQM--RERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 349 LVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVLKITSEM 405
+ +R G S YN+L+ Y K G+M L ++ M+ V+ D T + I+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI-ISGYC 409
Query: 406 PVSEVSSIF 414
V + S F
Sbjct: 410 KVGNLDSAF 418
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 16/273 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+AL++ Y + + A L+ +M + Y+ +++ Y G LD Q+ Q+ LK
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K PD +TY+ + + A + F + + + PD +Y+TL + K EK
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM------------SLFA 215
A + EM ++ + V YS L++ + E R+ K+ +L
Sbjct: 487 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 546
Query: 216 KMNDAEYTCVISSLVKL---GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ AE+ V++ L G ++A+ +Y + D V +IL+ + +
Sbjct: 547 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 606
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
A SF+ +++ G P T+ L G ++G +
Sbjct: 607 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 639
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 164/387 (42%), Gaps = 21/387 (5%)
Query: 29 RARENFFENLPDKMRGPDTCSALL-HSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
RA EN F NLP + L+ S Q + E L +++ + N M+
Sbjct: 183 RAAENMFANLPRVYKRKKALLVLMAGSSPQRENRVVMERLFKELKHRSWYTEASALNQMM 242
Query: 88 NLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KI 145
+ ++P + +E K +PDV +YNL+L + + E+ + L++
Sbjct: 243 LFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNA 302
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEK----RTCRKNRVAYSSLLSLYTNMGYKD 201
PD + L YI + +KA L E+E+ R+ + Y+ LL LY + K+
Sbjct: 303 RPDESTLLILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKE 362
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
V IW + S K D+ Y+ I++ K KAE I+ + + G + +L
Sbjct: 363 GVESIWSILSSRPLKAVDS-YSYAIAAFGKAEGVHKAEEIFAK---VDGLLETNQVIAML 418
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ Y + + A + +L K +K ++ L GYL++G+++K L+ F +R
Sbjct: 419 SVYAHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVFSMGCTVLRD 478
Query: 322 ------WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
W R++ + +G++ + + H ++ +Y +L+ Y G
Sbjct: 479 RCICSAW---ERVVLDLLDHFASRGEVAVIDRIFRMNSVLKHFINMRVYRVVLKAYLNHG 535
Query: 375 KMPLIIVERMQKDNVQMDAETQKVLKI 401
++ + +DAET+++L +
Sbjct: 536 ASLKRFMDWTMEMGFSVDAETRELLTL 562
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 155/359 (43%), Gaps = 10/359 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++ + + ++ EAEAL E++ + G YN +L Y+ G L M+ E+
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ SPD TY+L + A + E+A E++ + P+ +S L + +
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+K LKEM+ + +R Y+ ++ + D + + +M+S + + + +
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G AE +++ E NI++ +Y ++ + + + ++ ++GI
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P T L Y K G+ +EC + K++G P + A N ++G +
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG----LKPSSTMYNALINAYAQRGLSE 601
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKVL 399
A + + + G S NSL+ + + +++ M+++ V+ D T L
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L+ +YV + A ++++M ++ +L + G+ K Q+
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+E+K PD YN+ + N + A F + I+PD ++++TL + K
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
A + ME+R C Y+ +++ Y + D++ R+ KM S N
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+T ++ K G F A +E +S+ + N L+ AY R E A + + +
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 282 TKGIKP 287
+ G+KP
Sbjct: 612 SDGLKP 617
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + L+ + ++ + AE + E M G L C YN M+N Y + D
Sbjct: 477 PDRV----TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ ++L ++K + P+VVT+ + A + E+K + P Y+ L +
Sbjct: 533 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
Y + L E+A + M + + +A +SL++ + E + + M K
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDE 244
+ YT ++ +L+++ +F+K +Y+E
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEE 679
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 142/345 (41%), Gaps = 23/345 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S L+H+ +++K EA L +K + PL YN ++ N ++K ++ ++++
Sbjct: 171 SILIHALGRSEKLYEAFLLSQKQT-----LTPLTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 109 NT-SPDVVTYNLWLAACASQN--DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ D V Y+L + + N D + + E+++ K++ D + + + K P
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA L + S++S + G E +++++ K Y +
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ VK G + AE++ E E + D ++L+ AY+N + E A + +
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
+P + L G+ +G+ +K + K K+IG PD + + G +
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV----KPDRQFYNVVIDTF---GKFN 458
Query: 344 GAEHLLVTLRNAGHVSTE----IYNSLLRTYAKAGKMPLIIVERM 384
+H + T E +N+L+ + K G+ I+ E M
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH--IVAEEM 501
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y ++ + +A +E+M G YN ++N Y G ++ + +
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P ++ N + A A +K+ + PD ++Y+TL I+++
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 670
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLS 192
+K +EM C+ +R A S L S
Sbjct: 671 QKVPVVYEEMIMSGCKPDRKARSMLRS 697
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 155/359 (43%), Gaps = 10/359 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +++ + + ++ EAEAL E++ + G YN +L Y+ G L M+ E+
Sbjct: 277 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 336
Query: 107 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K+ SPD TY+L + A + E+A E++ + P+ +S L + +
Sbjct: 337 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 396
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+K LKEM+ + +R Y+ ++ + D + + +M+S + + + +
Sbjct: 397 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 456
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G AE +++ E NI++ +Y ++ + + + ++ ++GI
Sbjct: 457 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 516
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
P T L Y K G+ +EC + K++G P + A N ++G +
Sbjct: 517 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG----LKPSSTMYNALINAYAQRGLSE 572
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKVL 399
A + + + G S NSL+ + + +++ M+++ V+ D T L
Sbjct: 573 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 631
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T S L+ +YV + A ++++M ++ +L + G+ K Q+
Sbjct: 343 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 402
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+E+K PD YN+ + N + A F + I+PD ++++TL + K
Sbjct: 403 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 462
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
A + ME+R C Y+ +++ Y + D++ R+ KM S N
Sbjct: 463 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 522
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+T ++ K G F A +E +S+ + N L+ AY R E A + + +
Sbjct: 523 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 582
Query: 282 TKGIKP 287
+ G+KP
Sbjct: 583 SDGLKP 588
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 39 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 98
PD++ T + L+ + ++ + AE + E M G L C YN M+N Y + D
Sbjct: 448 PDRV----TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 503
Query: 99 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ ++L ++K + P+VVT+ + A + E+K + P Y+ L +
Sbjct: 504 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 563
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
Y + L E+A + M + + +A +SL++ + E + + M K
Sbjct: 564 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 623
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDE 244
+ YT ++ +L+++ +F+K +Y+E
Sbjct: 624 DVVTYTTLMKALIRVDKFQKVPVVYEE 650
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 142/345 (41%), Gaps = 23/345 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
S L+H+ +++K EA L +K + PL YN ++ N ++K ++ ++++
Sbjct: 142 SILIHALGRSEKLYEAFLLSQKQT-----LTPLTYNALIGACARNNDIEKALNLIAKMRQ 196
Query: 109 NT-SPDVVTYNLWLAACASQN--DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ D V Y+L + + N D + + E+++ K++ D + + + K P
Sbjct: 197 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 256
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
KA L + S++S + G E +++++ K Y +
Sbjct: 257 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 316
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ VK G + AE++ E E + D ++L+ AY+N + E A + +
Sbjct: 317 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 376
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
+P + L G+ +G+ +K + K K+IG PD + + G +
Sbjct: 377 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV----KPDRQFYNVVIDTF---GKFN 429
Query: 344 GAEHLLVTLRNAGHVSTE----IYNSLLRTYAKAGKMPLIIVERM 384
+H + T E +N+L+ + K G+ I+ E M
Sbjct: 430 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH--IVAEEM 472
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ Y ++ + +A +E+M G YN ++N Y G ++ + +
Sbjct: 522 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 581
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ P ++ N + A A +K+ + PD ++Y+TL I+++
Sbjct: 582 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 641
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLS 192
+K +EM C+ +R A S L S
Sbjct: 642 QKVPVVYEEMIMSGCKPDRKARSMLRS 668
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 148/324 (45%), Gaps = 3/324 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ Y + EA + +M+E GF + YN +++ S+G++ + + ++
Sbjct: 321 TFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM 380
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++N SP+V TY + A D A + + ++ P+ + Y+++ ++ + +
Sbjct: 381 ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMF 440
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A + +++M C N V +++ + G + + ++ +M N Y V
Sbjct: 441 SQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEV 500
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L+K ++A + E E + N + + N + E A +++ G+
Sbjct: 501 LDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGV 560
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
KP T+ LT+ Y +G+++ ++ K + + KWVP+ T+ + Q ++ A
Sbjct: 561 KPDAITYNTLTYAYCMQGKVKTAIQLLDK-LSAGGKWVPEVAAYTSLLWGICNQIGVEEA 619
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLR 368
L + N G ++ +N+L+R
Sbjct: 620 VLYLDKMLNEGICLNAATWNALVR 643
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 112/259 (43%), Gaps = 10/259 (3%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T AL+ + + A + KM G + + Y M+N+ + + ++++
Sbjct: 390 STYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK 449
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ N P+ VT+N ++ E A F ++++ P+ +Y+ + +K
Sbjct: 450 MSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENR 509
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A + EME++ N V Y+++ + N+G +E L++ KM+ K + Y
Sbjct: 510 IKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNR 279
+ + G+ + A + D+ + G VP + LL N+ +E A + ++
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSA----GGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDK 625
Query: 280 LVTKGIKPCYTTWELLTWG 298
++ +GI TW L G
Sbjct: 626 MLNEGICLNAATWNALVRG 644
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 118/288 (40%), Gaps = 7/288 (2%)
Query: 3 RRRPHGAQVRAQSYRQRV-AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNK 59
R R G Q + Y + A + + E + N+ + P+ T + LL + +N
Sbjct: 139 RIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNN 198
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNL 119
+ A L+ +MS G + Y +++ S +L KV + +EL P+V YN
Sbjct: 199 RVDGACKLLVEMSNKGCEPDVVSYTTVIS---SMSKLGKVEEA-RELSIRFQPNVSVYNA 254
Query: 120 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 179
+ + + ++ + IDP+ I+YST+ S + E A +M R
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG 314
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 239
C N ++SL+ Y G E L IW +M + N Y +I L G+ +A
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAV 374
Query: 240 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
++ + E + + L+ + L A +N+++T G P
Sbjct: 375 SVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 8/293 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P+VV YN + S A ++++ P+ +Y L + K A+
Sbjct: 352 PNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEI 411
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+M C N V Y+S++++ + + +KM + N + I L
Sbjct: 412 WNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCC 471
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G E A N++ + E + + + N +L + N+++ A + KG++ T
Sbjct: 472 SGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVT 531
Query: 292 WELLTWGYLKKGQMEKVLECFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + G+ G+ E+ L+ K +G V+ + +T AY QG + A LL
Sbjct: 532 YNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCM---QGKVKTAIQLLD 588
Query: 351 TLRNAGHVSTEI--YNSLLRTYAK--AGKMPLIIVERMQKDNVQMDAETQKVL 399
L G E+ Y SLL + ++ +++M + + ++A T L
Sbjct: 589 KLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNAL 641
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 123/321 (38%), Gaps = 46/321 (14%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+ +++N Y G ++ +M +++ P V YN L A S+N + E + +K
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMK 176
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ +P+ +Y+ L K + A L EM + C + V+Y++
Sbjct: 177 RDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTT------------ 224
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
VISS+ KLG+ E+A + SI + V N L+
Sbjct: 225 -----------------------VISSMSKLGKVEEAREL-----SIRFQPNVSVYNALI 256
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ +++ ++V KGI P T+ + G +E L + K VR
Sbjct: 257 NGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMF--VRG 314
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PL 378
P+ T+ +G + A ++ + G + YN+L+ GKM +
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAV 374
Query: 379 IIVERMQKDNVQMDAETQKVL 399
+ +M+++ + T L
Sbjct: 375 SVSSKMERNGCSPNVSTYGAL 395
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 143/300 (47%), Gaps = 21/300 (7%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGF 76
R+ V QAQ L +A+ F +L K T S L+ + + S +A L + M E G
Sbjct: 195 RKHVKQAQQLFHQAKNRF--SLTAK-----TYSILISGWGEIGDSEKACDLFQAMLEQG- 246
Query: 77 LKCP---LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKET 132
CP L YN++L G++D+ + + L K PD TY++++ + +D ++
Sbjct: 247 --CPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQS 304
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
A + ++++ + P+ +Y+ + K E E+A L EM R + + +Y+++ +
Sbjct: 305 AFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQA 364
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES-ISGT 251
+ + + LR+ +M + Y V+ L+++G F+K + WE+ +
Sbjct: 365 YHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEV---WENMVDKK 421
Query: 252 GDPRVP--NILLAAYI-NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
P V ++++ + + +LE A ++ ++ +GI P TT E+L L G ++ +
Sbjct: 422 FYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHI 481
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 2/274 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
+ +Y Q A +M E G + +L + + + Q+ + K
Sbjct: 153 IFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRF 212
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
S TY++ ++ D E A F + + D ++Y+ L K ++A
Sbjct: 213 SLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKN 272
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+M + + YS + Y + R+ KM N Y C+I L
Sbjct: 273 IFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLC 332
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K E+A + DE S D N + A + + ++ A R+ P
Sbjct: 333 KNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRH 392
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
T+ ++ ++ G+ +KV E ++ + +K+ P
Sbjct: 393 TYNMVLKLLIRIGRFDKVTEVWENMVD--KKFYP 424
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 149/341 (43%), Gaps = 14/341 (4%)
Query: 43 RGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
R + +AL ++ + A+ KM G +N M+ + +G+++ +
Sbjct: 113 RTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRF 172
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+++K + SPDVVTYN + E AEK F+E+K I+P ++Y+TL Y+
Sbjct: 173 FEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVS 232
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF-AKMNDA 220
++ + A ++EM+ + N + YS+LL N E I K+MM + A +++
Sbjct: 233 VDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNS 292
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
+ +ISS K G + A ++ +S + IL+ + Q + A ++L
Sbjct: 293 IFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKL 352
Query: 281 VTKGI--KPCYT------TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
+ K I +P T + L+ GQ K ++ + + V D +
Sbjct: 353 IEKDIILRPQSTLHLEPSAYNLMIEYLCNNGQASKAETLVRQLM---KLGVQDPTALNTL 409
Query: 333 YNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSLLRTYAK 372
++G D A LL + LR YNSL+++Y K
Sbjct: 410 IRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLK 450
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 52/314 (16%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FFE++ + PD T + +++ Y + KK EAE +M + Y ++ Y+
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYV 231
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
S Q+D ++++E +K I P+ I+
Sbjct: 232 SVDQVDDALRLVEE----------------------------------MKGFGIKPNAIT 257
Query: 152 YSTLTSLYIKMELPEKAATTLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
YSTL E +A LKE M+K + + L+S + G D + K M
Sbjct: 258 YSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAM 317
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD---EWESI-----SGTGDPRVPNILLA 262
+ L Y +I + K G+++KA + D E + I + +P N+++
Sbjct: 318 IRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNLMIE 377
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
N Q AE+ +L+ G++ T L G+ ++G + E K + R+
Sbjct: 378 YLCNNGQASKAETLVRQLMKLGVQDP-TALNTLIRGHSQEGSPDSAFELLKIML---RRK 433
Query: 323 VPDHRLITAAYNKL 336
V + +AYN L
Sbjct: 434 VDSEK---SAYNSL 444
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 101/273 (36%), Gaps = 37/273 (13%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
D ++ SY + E+ + +KM E G + YN + + + G+ + +
Sbjct: 81 DMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNK 140
Query: 106 -LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
L + P T+N+ + ETA + F ++K +I PD ++Y+T+ + Y +++
Sbjct: 141 MLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKK 200
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E+A EM+ R V Y++L
Sbjct: 201 MEEAEKYFVEMKGRNIEPTVVTYTTL---------------------------------- 226
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
I V + + + A + +E + + + LL N ++ A ++ K
Sbjct: 227 -IKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 285 IKPCYTTWEL-LTWGYLKKGQMEKVLECFKKAI 316
+ P + L L + K G ++ + K I
Sbjct: 286 LAPTDNSIFLRLISSHCKSGNLDAAADVLKAMI 318
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%)
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
L++ K ++ D + + Y K + +++ ++ME+ + +Y++L +
Sbjct: 68 LLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILR 127
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G R + KM+S + + +I G+ E A +++ +S + D
Sbjct: 128 RGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 257 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
N ++ Y ++E AE ++ + + I+P T+ L GY+ Q++ L ++
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 317 G 317
G
Sbjct: 248 G 248
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 123/291 (42%), Gaps = 6/291 (2%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYN 84
A + + +P+ PD S LL + K++ EA L+ M++ CP + Y
Sbjct: 148 AMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 85 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++N + + GQ+DK + E+ + P+VVTY + + AE F ++
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ PD +Y+ L Y+ + ++ L+EM + + Y SLL+ N G E
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+ M+ K N A Y +I G + ++ + + D + NI+ A
Sbjct: 328 RFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
Y + ++ A +N++ +G+ P + L K G+++ + F +
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQ 438
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 16/275 (5%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID-------PDWISYSTLTSLYIKME 163
+PDVV+YN L ++ E A LEL D P+ +SY+T+ + +
Sbjct: 162 TPDVVSYNTLLKGFCNEKRAEEA----LELLHMMADSQGRSCPPNVVSYATVINGFFTEG 217
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+KA EM R + N V Y++++ D ++++M+ K ++ Y
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
C+I + +G++++ + +E + D LL N + A F++ ++ K
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
GIKP + +L GY KG + ++ + + + PDH + + ++ ID
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN--GLSPDHHIFNIIFTAYAKKAMID 395
Query: 344 GAEHLLVTLRNAGHVSTEIYN--SLLRTYAKAGKM 376
A H+ ++ G +S ++ N +L+ K G++
Sbjct: 396 EAMHIFNKMKQQG-LSPDVVNFGALIDALCKLGRV 429
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 127/300 (42%), Gaps = 5/300 (1%)
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ L + PDVV +N L ++ A++ +++ PD ISY+TL + +
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLV 531
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++AA +L M + + Y++LL Y G D+ ++++M+ Y
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ ++ L F +A+ +Y + + + NI+L N ++ A + L +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
K + TT+ ++ K G+ E + F A S VPD L E+G +
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLF--ATISSYGLVPDVFTYCLIAENLIEEGYL 709
Query: 343 DGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPL--IIVERMQKDNVQMDAETQKVL 399
+ + L + +G ++ + N+L+R G + + ++ + N ++A T +L
Sbjct: 710 EEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAML 769
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 118/275 (42%), Gaps = 3/275 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +LL+ N + EA + M G Y +++ Y + G L ++ +
Sbjct: 306 PDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDL 365
Query: 103 LQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L + +N SPD +N+ A A + + A F ++K+ + PD +++ L K
Sbjct: 366 LNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK 425
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ + A +M N ++SL+ + ++ + +M++ + +
Sbjct: 426 LGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVF 485
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ ++ +L G+ KA+ + D E + D L+ + +++ A + ++
Sbjct: 486 FNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVML 545
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ G+KP T+ L GY + G+++ F++ +
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML 580
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 34 FFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F E++ + PD C++L+ + + K+ +A +ME + + G + + YN +++
Sbjct: 106 FLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMC 165
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S G+ ++L ++ ++ SP VVT+N+ + + A ++ K P+ +
Sbjct: 166 STGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSL 225
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY+ L + K + E+A L +M R C + V Y++LL+ G D + + ++
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQL 285
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
S Y VI L K+G+ ++A + DE + D + L+ ++
Sbjct: 286 SSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKV 345
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ A F++ L G+KP T+ + G K + ++ ++
Sbjct: 346 DEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAID 385
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 124/287 (43%), Gaps = 3/287 (1%)
Query: 27 QTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
+TR E + D PD T + L+ + +AE L+ M G + +N
Sbjct: 134 KTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFN 193
Query: 85 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++N G L + +L+++ K +P+ ++YN L + E A + ++
Sbjct: 194 ILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR 253
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
PD ++Y+TL + K + A L ++ + C + Y++++ + +G D+
Sbjct: 254 GCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 313
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
++ +M + K + Y+ ++ L + G+ ++A + + E + + N ++
Sbjct: 314 AKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLG 373
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ + A F +V +G KP ++ +L G +G ++ LE
Sbjct: 374 LCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALE 420
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 52 LHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS 111
L V+N + E +E M G + +P ++ + G+ K ++++ ++ + +
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150
Query: 112 -PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV+TYN+ ++ S AEK ++ + P ++++ L + + L +A
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
L++M K C N ++Y+ LL + + + KM S + Y ++++L
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
K G+ + A + ++ S + N ++ + + A + + KG+KP
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330
Query: 291 TWELLTWGYLKKGQMEKVLECF 312
T+ L G ++G++++ ++ F
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFF 352
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ E +P P++ S LLH + + KK A + KM+ G + YN +L
Sbjct: 210 DVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTAL 269
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+G++D ++L +L K SP ++TYN + + + A K E++ + PD
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDI 329
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+YS+L + ++A ++E + N + Y++++ D +
Sbjct: 330 ITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY 389
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 245
M+ K +A YT +I L G ++A + +E
Sbjct: 390 MVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 2/269 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
LL + +N EA +L E M F + +L + G++ + +L ++K+
Sbjct: 239 GCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKE 297
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PD+V YN L A A E+KK P+ S++ L + K E ++
Sbjct: 298 AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDE 357
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A EM+ C + V Y++L+S + G D+ I M+ + Y C++
Sbjct: 358 AMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMM 417
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ K E E+ + +E I D + N ++ L+ A + + G+ P
Sbjct: 418 AHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 477
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAI 316
T+ L+ G+L +G + + + FK+ +
Sbjct: 478 GLDTYILMVHGFLSQGCLVEACDYFKEMV 506
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 124/297 (41%), Gaps = 38/297 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++LL+ + + K EA+ ++ ++ E GF + YN++L Y G++ +L E+KK
Sbjct: 273 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 332
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P+ ++ + + + + A + F E++ + + D ++Y+TL S + K +K
Sbjct: 333 VNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 392
Query: 168 AATTL-----------------------------------KEMEKRTCRKNRVAYSSLLS 192
A L +EM K C + Y++++
Sbjct: 393 AYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIR 452
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
L +G E +R+W +M + Y ++ + G +A + + E
Sbjct: 453 LVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLS 512
Query: 253 DPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
P+ + L A + +LEMA++ ++ + TKG + + W + G +++
Sbjct: 513 APQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKE 569
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
P V +L+ + + ++ A + + G +P + L K G +++ F+
Sbjct: 200 PEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFE 259
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
VR + P+ R T+ +G I A+H+LV ++ AG +YN+LL YA+
Sbjct: 260 DM--RVR-FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 316
Query: 373 AGKM--PLIIVERMQKDNVQMDAETQKVL 399
AGKM ++ M+K N +A + +L
Sbjct: 317 AGKMRDAFDLLAEMKKVNCGPNAASFTIL 345
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 27 QTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
QT+A N F + K P+ TC++L+++ + L+ +M + + +
Sbjct: 230 QTQAF-NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288
Query: 85 HMLNLYISNGQL----DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
+++ G + D V M Q PDVVTY + +++ + A K F +
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQ---SGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM 345
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
P+ SY+TL + Y K+E +KA +EM ++ N V Y++L+ ++G
Sbjct: 346 VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRL 405
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+ + ++++M++ + Y ++ L K +KA + E + D ++ I+
Sbjct: 406 QDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIV 465
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ +LE A ++ L +KG+KP T+ ++T G K+G +++ + F
Sbjct: 466 IDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLF 517
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 145/363 (39%), Gaps = 35/363 (9%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L++S+ + A +++ K+ + G + ++ GQ+ + + ++
Sbjct: 111 TLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+ PDVV Y + A + ++K PD + Y TL K
Sbjct: 171 IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQ 230
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE---- 221
+A EM + N V +SL+ N+G WK + +L +M D++
Sbjct: 231 TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGE-------WKHVNTLLNEMVDSKIMPN 283
Query: 222 ---YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
T V+ +L K G +A ++ D D L+ + R++++ A ++
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+V KG P ++ L GY K +M+K + F++ +K +P+ T YN L
Sbjct: 344 MMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEM--CRQKLIPN----TVTYNTL-- 395
Query: 339 QGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKV 398
I G H+ G + I +L R G++P ++ R+ D + + K
Sbjct: 396 ---IHGLCHV-------GRLQDAI--ALFREMVACGQIPDLVTYRILLDYLCKNCHLDKA 443
Query: 399 LKI 401
+ +
Sbjct: 444 MAL 446
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 105/266 (39%), Gaps = 4/266 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +AL+ + + EA + + M G YN ++N Y ++DK +
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+ ++ P+ VTYN + + A F E+ PD ++Y L K
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK 436
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+KA LK +E + Y+ ++ G ++ ++ + S K N
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y + L K G ++A ++ E + + + D N + ++ N+ A ++
Sbjct: 497 YNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEK 307
+G C + L G L +++
Sbjct: 557 ARGFS-CDVSTTTLLVGMLSDDGLDQ 581
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 155/356 (43%), Gaps = 15/356 (4%)
Query: 29 RARENFFENLPDKMRGP-DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
RA E E D + P D +++H Y + + + E++ ECGF + Y +L
Sbjct: 391 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 450
Query: 88 NLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
NLY+ G++ K + +E++ + TY++ + +D A F E+ ++ +
Sbjct: 451 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 510
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD Y+ L + KM ++A L++M+K + + A+ ++ Y G L
Sbjct: 511 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 570
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAAYI 265
M Y +I LV+ + ++A ++ D+ SI+G T + I++ Y
Sbjct: 571 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM-SIAGITPNEHTYTIIMRGYA 629
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
+ A ++ ++ G+K +E L K G+M+ L ++ S +K +P
Sbjct: 630 ASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM--SFQK-IPR 686
Query: 326 HRLITAAYNKL----EEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+ I YN L +GD+ AE L+ ++ G + Y S + KAG M
Sbjct: 687 NTFI---YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDM 739
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 142/363 (39%), Gaps = 41/363 (11%)
Query: 55 YVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPD 113
Y + A A E M G + +++ Y + ++E+K +
Sbjct: 307 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELT 366
Query: 114 VVTYNLWLAACASQNDK------ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+VTY++ ++ A ND E AE+ E+++ ID Y ++ Y ++ K
Sbjct: 367 IVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENK 426
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ +++ + + ++Y LL+LY +G + L I K+M S K N+ Y+ +I+
Sbjct: 427 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 486
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ L +F A I++E D + N+L+ A+ ++ A ++ + ++P
Sbjct: 487 GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 546
Query: 288 CYTTWELLTWGYLKKGQMEKVLE---------CFKKAI-------GSVRKW--------- 322
+ + GY G M+ L+ C + G VRK
Sbjct: 547 SNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVL 606
Query: 323 --------VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 373
P+ T GDI A ++ +G + IY +LLR K+
Sbjct: 607 DKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 666
Query: 374 GKM 376
G+M
Sbjct: 667 GRM 669
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 123/307 (40%), Gaps = 44/307 (14%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + L + A + DK A F ++ I+P+ +++L Y A +
Sbjct: 295 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 354
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYT---------NMGYKDEVLR------------IWKKM 210
++EM+ V YS L+S + NM +E++R ++ M
Sbjct: 355 VEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSM 414
Query: 211 MS-------------LFAKMNDA-------EYTCVISSLVKLGEFEKAENIYDEWESISG 250
M +F ++ + Y C+++ VK+G+ KA +I E ES
Sbjct: 415 MHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGI 474
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ + ++L+ +I+ + A + + ++ G++P + LL + K G M++ +
Sbjct: 475 KHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAIC 534
Query: 311 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 369
+K + P +R GD+ A L +R +G V T + YN+L+
Sbjct: 535 ILEKM--QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHG 592
Query: 370 YAKAGKM 376
+ K+
Sbjct: 593 LVRKHKV 599
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 120/306 (39%), Gaps = 40/306 (13%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T S L++ ++ A A A+ E+M G YN ++ + G +D+ +L+++
Sbjct: 480 TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 539
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+K P + + A D ++A ++++ P ++Y+ L ++
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 599
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A + L +M N Y+ ++ Y G + + K+ K++ Y +
Sbjct: 600 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 659
Query: 226 ISSLVKLGEFEKA-------------ENIY-------------DEWES------ISGTGD 253
+ + K G + A N + D WE+ + G
Sbjct: 660 LRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGV 719
Query: 254 PRVPNI-LLAAYINR----NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
P PNI +YIN ++ AE +V G+KP T+ L G+ + ++
Sbjct: 720 P--PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRA 777
Query: 309 LECFKK 314
L+CF++
Sbjct: 778 LKCFEE 783
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 99/239 (41%), Gaps = 1/239 (0%)
Query: 68 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACAS 126
++ M G + + YN +++ + ++ + +L ++ +P+ TY + + A+
Sbjct: 571 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 630
Query: 127 QNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVA 186
D A + F ++K++ + D Y TL K + A +EM + +N
Sbjct: 631 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 690
Query: 187 YSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWE 246
Y+ L+ + G E + K+M N YT I++ K G+ ++AE + +E
Sbjct: 691 YNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMV 750
Query: 247 SISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
+ + + L+ + + + A + + G+KP ++ L L + +
Sbjct: 751 DVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATV 809
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 6/291 (2%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYN 84
A + + +P+ PD S LL + K++ EA L+ M++ CP + Y
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 85 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++N + + GQ+DK + E+ + P+VVTY + + AE F ++
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ PD +Y+ L Y+ + ++ L+EM + + Y SLL+ N G E
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
++ M+ K N A Y +I G + ++ + + D + NI+ A
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
Y + ++ A +N++ +G+ P + L K G+++ + F +
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQ 438
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 160/411 (38%), Gaps = 59/411 (14%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPDTCSALLH-----SYVQNKKSAEAEA-----LMEK 70
A++ +L F+ L R P + A H S V ++S+ E+ L +
Sbjct: 23 ARSGSLGLDDALKLFDGLLTHAR-PASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNR 81
Query: 71 M-SECGFLKCPLP--YNHMLNLYISNGQLDKVPQMLQELKKNT--SPDVVTYNLWLAACA 125
M EC P P Y+ ++ + G+L+ + K+ ++V L C
Sbjct: 82 MIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM---EKRTCRK 182
++ E + + + PD +SY+TL + + E+A L M + R+C
Sbjct: 142 AKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N V+Y+ +++ + G D+ ++ +MM + N YT VI L K ++AE ++
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261
Query: 243 DEWESISGTGDPRVPNILLAAYI-----------------------------------NR 267
+ D N L+ Y+ N
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+ A ++ ++ KGIKP + +L GY KG + ++ + + + PDH
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN--GLSPDHH 379
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
+ + ++ ID A H+ ++ G +S ++ Y +L+ K G++
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQG-LSPDVVNYGALIDALCKLGRV 429
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 116/299 (38%), Gaps = 5/299 (1%)
Query: 29 RAREN--FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
R RE F+++ K P+ L+H Y +E L+ M E G +N
Sbjct: 323 RCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN 382
Query: 85 HMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+ Y +D+ + ++K+ SPDVV Y + A + A F ++
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE 442
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ P+ +++L ++ EKA EM + R + V ++++L G +
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
R+ M + + YT +I +G ++A D S+ D N LL
Sbjct: 503 QRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
Y +++ A + ++ GI P T+ + G + + E + I S ++W
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW 621
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 126/300 (42%), Gaps = 5/300 (1%)
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ L + PDVV +N L ++ A++ +++ P ISY+TL + +
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLV 531
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++AA +L M + + Y++LL Y G D+ ++++M+ Y
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ ++ L F +A+ +Y + + + NI+L N ++ A + L +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
K + TT+ ++ K G+ E + F A S VPD L E+G +
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLF--ATISSYGLVPDVFTYCLIAENLIEEGYL 709
Query: 343 DGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPL--IIVERMQKDNVQMDAETQKVL 399
+ + L + +G ++ + N+L+R G + + ++ + N ++A T +L
Sbjct: 710 EEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAML 769
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 141/335 (42%), Gaps = 4/335 (1%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQ 104
+T +++ + + ++ L+E++ E G C N++++ +G ++D +
Sbjct: 276 ETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRW 335
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ + PD+ TYN+ + + KE A E K + +SY+ L Y K +
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKE 395
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ A+ L ++ +R C+ + V Y L+ G+ D+ + + K++ + A Y
Sbjct: 396 YDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++S L K G F A+ ++ E S D V L+ +I + A + V KG
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKG 515
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+K + G+ + G +++ L C + + VPD + + +Q D+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRM--NEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 345 AEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKMPL 378
A + + +N + Y SL+ + G L
Sbjct: 574 AIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSL 608
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 139/308 (45%), Gaps = 19/308 (6%)
Query: 34 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH--MLNLYI 91
++++PD + C+ALL V++++ +A + ++M E G C Y+ M+
Sbjct: 163 LYDSVPDVI----ACNALLSLVVKSRRLEDARKVYDEMCERG--GCVDNYSTCIMVKGMC 216
Query: 92 SNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S G++++ +++++ K P++V YN + D E A+ F ELK P
Sbjct: 217 SEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLE 276
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
++ T+ + + K + L+E+++R R ++++ G+K + + +
Sbjct: 277 TFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWI 336
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW--ESISGTGDPRVPNILLAAYINRN 268
++ K + A Y +I+ L K G+ E A + DE + + T P L+ AY
Sbjct: 337 VANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAP--LIQAYCKSK 394
Query: 269 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ ++A +L +G KP T+ +L G + G M+ + K I R PD
Sbjct: 395 EYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID--RGVSPD--- 449
Query: 329 ITAAYNKL 336
A YN L
Sbjct: 450 -AAIYNML 456
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 113/284 (39%), Gaps = 5/284 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L++ + K A L+++ S+ G + L Y ++ Y + + D ++
Sbjct: 343 PDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKL 402
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L +L ++ PD+VTY + + + A ++L + PD Y+ L S K
Sbjct: 403 LLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
A EM R+ + Y++L+ + G DE +++ + K++
Sbjct: 463 TGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVH 522
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I + G ++A + D + ++ Y+ + + A + +
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDME 582
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
KP T+ L G+ +G E FK+ R VP+
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEM--QSRDLVPN 624
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 38 LPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
L D+ PD + L+ + + A+ L +M + L Y +++ +I +G
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGD 500
Query: 96 LDKVPQMLQ-ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
D+ ++ ++K DVV +N + + A + + + PD +YST
Sbjct: 501 FDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
+ Y+K + A ++MEK C+ N V Y+SL++ + G +K+M S
Sbjct: 561 IIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRD 620
Query: 215 AKMNDAEYTCVISSLVK 231
N YT +I S K
Sbjct: 621 LVPNVVTYTTLIRSFAK 637
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM-LQELK 107
+ L+ +Y ++K+ A L+ +++E G + Y +++ + +G +D M ++ +
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SPD YN+ ++ A+ F E+ I PD Y+TL +I+ ++
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDE 503
Query: 168 AATTL---------------KEMEKRTCRK--------------------NRVAYSSLLS 192
A M K CR ++ YS+++
Sbjct: 504 ARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
Y ++I++ M K N YT +I+ G+F AE + E +S
Sbjct: 564 GYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQS----- 618
Query: 253 DPRVPNILLAAYINR------NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
VPN++ + R + LE A ++ ++T P T+ L G++KK
Sbjct: 619 RDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 83/217 (38%), Gaps = 3/217 (1%)
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
KK + + + S+ L + + + L + + A S +L Y G+
Sbjct: 91 KKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFL 150
Query: 201 DEVLRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
+ + I+ ++ L+ + D ++S +VK E A +YDE G D I
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCI 210
Query: 260 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 319
++ + ++E KG P + + GY K G +E FK+ +
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKEL--KL 268
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
+ ++P N ++GD ++ LL ++ G
Sbjct: 269 KGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERG 305
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 161/381 (42%), Gaps = 19/381 (4%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
N + + +K PD T + ++ + + + +EA+ L+++M E + Y+ ++N
Sbjct: 269 HNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA 328
Query: 90 YISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
Y+ + + ++ E L + P+ +TYN + QN + AE F + PD
Sbjct: 329 YVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPD 388
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+++TL Y + + L EM + + Y++L+ + +G + L + +
Sbjct: 389 VFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ 448
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY----------DEWESISGT-GDPRVP 257
+M+S + ++ L G+ + A ++ D +G D +
Sbjct: 449 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
NIL++ IN + AE Y + +GI P T+ + G K+ ++++ + F ++G
Sbjct: 509 NILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMF-DSMG 567
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
S + + PD + + G +D L + G V+ I Y +L+ + K G +
Sbjct: 568 S-KSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNI 626
Query: 377 --PLIIVERMQKDNVQMDAET 395
L I + M V D T
Sbjct: 627 NGALDIFQEMISSGVYPDTIT 647
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 120/298 (40%), Gaps = 10/298 (3%)
Query: 19 RVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
RV +A AL R E+ + P+++ T ++ + + A L+ KM E +K
Sbjct: 193 RVVEAVALLDRMVEDGLQ--PNQI----TYGTIVDGMCKIGDTVSALNLLRKMEEMSHIK 246
Query: 79 CP--LPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEK 135
P + Y+ +++ +G+ + E++ K PD+ TYN + S A++
Sbjct: 247 -PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQR 305
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
E+ + KI+P+ ++YS L + Y+K +A EM R N + Y+S++ +
Sbjct: 306 LLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFC 365
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
D ++ M + + + +I + + E D
Sbjct: 366 KQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTT 425
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
N L+ + L A ++++ G+ P T L G G+++ LE FK
Sbjct: 426 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 137/336 (40%), Gaps = 42/336 (12%)
Query: 80 PLP----YNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAE 134
PLP +N ++ + + + D V + Q++++ P DV ++N+ + S + A
Sbjct: 73 PLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFAL 132
Query: 135 KAFLELKKTKIDPDWISYSTL-------------TSLYIKMELPE--------------- 166
F ++ K PD +++STL L+ +M P
Sbjct: 133 STFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVTFTTLMNGLCREG 192
Query: 167 ---KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL-FAKMNDAEY 222
+A L M + + N++ Y +++ +G L + +KM + K N Y
Sbjct: 193 RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIY 252
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+ +I L K G A N+Y E + D N ++ + + + A+ ++
Sbjct: 253 SAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLE 312
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
+ I P T+ L Y+K+ + + E + + + R +P+ + + +Q +
Sbjct: 313 RKINPNVVTYSALINAYVKERKFFEAEELYDEML--PRGIIPNTITYNSMIDGFCKQNRL 370
Query: 343 DGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 376
D AEH+ + G S ++ +N+L+ Y A ++
Sbjct: 371 DAAEHMFYVMATKG-CSPDVFTFNTLIDGYCGAKRI 405
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 154/351 (43%), Gaps = 18/351 (5%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E LPD + T + L+ + + + S++A L+E+M + G + +N ++
Sbjct: 340 ERLGTALPDVV----TYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G+L++ L+++ ++ +PDV+TYN + A + A E+ + D
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+ +T+ KM+ E A L +R + V+Y ++++ Y + LR+W +M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + + Y +I L ++ ++A + +E+ D NI++ AY L
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
E A F+N++V KP T L G G+++K L+ F+ WV + +
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFE-------SWVEKGKKVD 628
Query: 331 A-AYNKLEEQ----GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
YN L + GD+D A H + G YN +L ++AG+
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 144/358 (40%), Gaps = 31/358 (8%)
Query: 4 RRPHGAQVRAQSYRQRVAQAQALQT----------------RARENFFENLPDKMRGPD- 46
R PH A S R+R +LQ +A + F +L + P+
Sbjct: 149 RLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNH 208
Query: 47 -TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T + L+H++ A+A A + M G + YN +LN + G L + +L
Sbjct: 209 YTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLAR 268
Query: 106 LKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+K++ +P TYN ++A A + A K + +PD +Y+ L +
Sbjct: 269 MKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGK 328
Query: 165 PEKAATTLKEMEK-RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
++A EME+ T + V Y++L+ + LR+ ++M K +
Sbjct: 329 VDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHN 388
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNRL 280
V+ SL K G+ E+A + E I+ G D N L+ AY + A + + +
Sbjct: 389 IVVKSLCKEGKLEEA---LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNK 335
V KG+K T + + K + E E R +VPD + + AAY K
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP--PQRGFVPDEVSYGTVMAAYFK 501
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 5/293 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
+N +++ + S G L L ++ SPD VTYN L A + A +K
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P +Y+TL S + ++ ++A ++ M + Y+ L G D
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330
Query: 202 EVLRIWKKMMSLFAKMND-AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
E R+ +M L + D Y ++ + K A + +E NI+
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ + +LE A ++ +G+ P T+ L Y K G + K + +G
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
K + L T YN L + + AE LL + G V E+ Y +++ Y K
Sbjct: 451 K-MDTFTLNTVLYN-LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
E + ++ PD T + L+ +Y + A+A LM++M G N +L
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466
Query: 93 NGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ + ++L ++ PD V+Y +AA + + E A + + ++ + K+ P +
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL +ME ++A L E ++ + Y+ ++ Y G + R KM+
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
K + +++ L G+ +KA +++ W D N L+ + ++
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
A F++ + KG++P T+ ++ + G+ E+
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEE 682
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QE 105
T + +L++ + K+ +AE L+ + GF+ + Y ++ Y + ++ Q
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515
Query: 106 LKKNTSPDVVTYNLWLAA-CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+++ P + TYN + C + KE +K E + + PD +Y+ + Y K
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDK-LNEFVEKGLVPDETTYNIIIHAYCKEGD 574
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
E A +M + + + + V ++L++ G D+ L++++ + K++ Y
Sbjct: 575 LENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNT 634
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I S+ K+G+ + A + +D+ E D N++L+A + E A + ++L G
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 66/359 (18%), Positives = 131/359 (36%), Gaps = 49/359 (13%)
Query: 81 LPYNHMLNLYISNGQLD-----------------------------KVPQMLQEL----- 106
LPY H+L L +S LD ++P + +L
Sbjct: 103 LPYRHLLPLLLSFVPLDPLRHLHRHLLAHLPTSPLADAALSAYARLRLPHLAAQLLHSLR 162
Query: 107 -KKNTSPDVVTYNLWLAACASQND--KETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
++ P + N L+A + + + F L + ++ P+ +++ L +
Sbjct: 163 RRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKG 222
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
A TL M+ + V Y++LL+ + G E + +M Y
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
++S+ +LG ++A + + + D R N+L +++ A + +
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERL 342
Query: 284 GIK-PCYTTWELLTWGYLK---KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
G P T+ L K ++LE + V+ + H ++ + K +
Sbjct: 343 GTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK--GVKPTLVTHNIVVKSLCK---E 397
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
G ++ A L + G I YN+L+ Y KAG + +++ M ++MD T
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFT 456
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 139/318 (43%), Gaps = 11/318 (3%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPD------TCSALLHSYVQNKK 60
HG +Y V +AL R R + MRG T + L+ ++ + +
Sbjct: 146 HGVAPNVYTYNILV---RALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202
Query: 61 SAEAEALMEKMSECGFLKCPL-PYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN 118
AE ++ M E G K L +N M+N G+++ ++ E+ ++ +PDVV+YN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
L+ + F E+ + + PD +++++L K E+A + +M +R
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
R N V +++L+ + G+ D+ L ++M + + Y +I+ KLG + A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 239 ENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG 298
+ E E+ D + +++ Y L+ A +++ KG+ P T+ L G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 299 YLKKGQMEKVLECFKKAI 316
++ ++ E F+ +
Sbjct: 443 LCEEKRLNDACELFENML 460
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 125/278 (44%), Gaps = 4/278 (1%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
AR+ F E + + + PD S LL Y + E+ A+ +M++ G + + + ++
Sbjct: 242 ARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 300
Query: 88 NLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ G L++ ++ +++ + + VT+ + + + A A E++K I
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P + Y+ L + Y K+ + A ++EME + + + V YS+++S Y +G D ++
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+KM+ + Y+ +I L + A +++ + D L+ +
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
+E A S ++ ++ KG+ P T+ +L G K +
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 147/369 (39%), Gaps = 42/369 (11%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKK 108
AL+ SY + + A A + + G+ YN +L L +S+ L + L L+
Sbjct: 88 ALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVL-LALSDASLPSARRFLSSMLRH 146
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+P+V TYN+ + A ++ E A +++ P+ ++Y+TL + + +
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR------- 199
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
A L E+ ++SL G AK N + +++
Sbjct: 200 AGELDGAER------------VVSLMREEGN---------------AKPNLVTFNSMVNG 232
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L K G E A ++DE D N LL+ Y L + + ++ + +G+ P
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L K G +E+ + + R + TA + ++G +D A
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQM--RERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 349 LVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVLKITSEM 405
+ +R G S YN+L+ Y K G+M L ++ M+ V+ D T + I+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI-ISGYC 409
Query: 406 PVSEVSSIF 414
V + S F
Sbjct: 410 KVGNLDSAF 418
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 16/273 (5%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+AL++ Y + + A L+ +M + Y+ +++ Y G LD Q+ Q+ LK
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K PD +TY+ + + A + F + + + PD +Y+TL + K EK
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM------------SLFA 215
A + EM ++ + V YS L++ + E R+ K+ +L
Sbjct: 487 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 546
Query: 216 KMNDAEYTCVISSLVKL---GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+ AE+ V++ L G ++A+ +Y + D V +IL+ + +
Sbjct: 547 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 606
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 305
A SF+ +++ G P T+ L G ++G +
Sbjct: 607 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 639
>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 4/268 (1%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
S +V+ YN+ L + + AEK F E+ + + PD I++ST+ S LP KA
Sbjct: 173 SREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVE 232
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
++M + C + V YS+++ Y G D L+++ + + +++ ++ +I
Sbjct: 233 WFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYG 292
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
G F+ N+Y+E +++ + + N LL A + A++ Y + G++P +
Sbjct: 293 MSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWG 352
Query: 291 TWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L Y + E L +K K GS +PD ++ G + AE +
Sbjct: 353 TYAALLRAYGRARYAEDALIVYKEMKEKGS-GNCMPDSWTFSSLITIYSCSGKVSEAEAM 411
Query: 349 LVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
L + AG + + SL++ Y KA +
Sbjct: 412 LNAMLEAGFEPNIFVLTSLIQCYGKANR 439
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 7/247 (2%)
Query: 21 AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 78
A+ +L +A E +FE +P+ PD T SA++ +Y + A L ++ +
Sbjct: 221 ARVSSLPNKAVE-WFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRI 279
Query: 79 CPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAF 137
P+ ++ ++ +Y +G D + +E+K P++V YN L A A+ +
Sbjct: 280 DPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIY 339
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR---TCRKNRVAYSSLLSLY 194
E+ + P W +Y+ L Y + E A KEM+++ C + +SSL+++Y
Sbjct: 340 KEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLITIY 399
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+ G E + M+ + N T +I K ++ +D + T D
Sbjct: 400 SCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDD 459
Query: 255 RVPNILL 261
R +L
Sbjct: 460 RFCGCML 466
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 164/387 (42%), Gaps = 21/387 (5%)
Query: 29 RARENFFENLPDKMRGPDTCSALL-HSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
RA EN F NLP + L+ S Q + E L +++ + N M+
Sbjct: 183 RAAENIFANLPRVYKRKKALLVLMAGSSPQRENRVVMEKLFKELKHRSWYTEASGLNQMM 242
Query: 88 NLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KI 145
+ ++P + +E K +PDV +YNL+L + + E+ + L++
Sbjct: 243 LFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNA 302
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEK----RTCRKNRVAYSSLLSLYTNMGYKD 201
PD + L YI + +KA L E+E+ R+ + Y+ LL LY + K+
Sbjct: 303 RPDESTLLILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKE 362
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
V IW + S K D+ Y+ I++ K KAE I+ + + G + +L
Sbjct: 363 GVENIWSILSSRPLKAVDS-YSYAIAAFGKAEGVHKAEEIFAK---VDGLLETNQVIAML 418
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ Y + + A + +L K +K ++ L GYL++G+++K L+ F +R
Sbjct: 419 SVYTHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVFTMGCTVLRD 478
Query: 322 ------WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAG 374
W R++ + +G++ + + H ++ +Y +L+ Y G
Sbjct: 479 RCICSAW---ERVVLDLLDHFASRGEVAVIDRIFRMNSVLKHFINMRVYRVVLKAYLNHG 535
Query: 375 KMPLIIVERMQKDNVQMDAETQKVLKI 401
++ + +DAET+++L +
Sbjct: 536 ASLKRFMDWTMEMGFSVDAETRELLTL 562
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 159/370 (42%), Gaps = 14/370 (3%)
Query: 33 NFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHML 87
+ +LP PD S A+L K+ + LME+M + CP + +N ++
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR---MACPPNIVTFNTLI 269
Query: 88 NLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
+ NG ++V ++L ++ ++ +PD+ Y + + + A + + +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ + Y+TL E E+ L EM + C + V ++ L+ + G D V+ +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++M+ + YT VI+ K G ++A + + + I+L +
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+ AE ++++ +G T+ L KKG +E+ +E K+ + V PD
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDL 507
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLII--VER 383
+ + L + G D A LL + N G +T IY+S+ ++ G++ +I +
Sbjct: 508 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDN 567
Query: 384 MQKDNVQMDA 393
+Q ++ DA
Sbjct: 568 IQDTTIRSDA 577
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ + QN L+E+M G + + Y ++N + G +D+ +L+ +
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P+ ++Y + L S AE ++ + + I+++TL + K L E+A
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
LK+M C + ++YS+++ G DE L + M++ N Y+ + S+L
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
+ G K ++D + + D + N ++++ R + E A F +V+ G P
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAI--GSVRKWVPDH 326
+T+ +L G +G +++ E + G++RK + H
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 129/325 (39%), Gaps = 4/325 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++ + + A+A A++++M G P Y+ +L G ++L++L +
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ DV NL L A Q + A +L +PD +SY+ + +
Sbjct: 188 CALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 247
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
++EM + C N V +++L+S G + V + +M + Y +I +
Sbjct: 248 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGI 307
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + A I + S + N LL + + E E + K
Sbjct: 308 CKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ +L + + G +++V+E ++ + V +PD T N ++G ID A LL
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQML--VHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 350 VTLRNAGHVSTEI-YNSLLRTYAKA 373
++ G I Y +L+ A
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSA 450
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 9/305 (2%)
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
++ +G++DK + E+ ++ P ++ N + + + AE ++ + I PD
Sbjct: 58 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 117
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
+YS + K + +KA L++M + R N + Y+SL+ Y+ G +E +R++K
Sbjct: 118 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 177
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 268
+M S I +L K G +A+ I+D D + +L Y
Sbjct: 178 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 237
Query: 269 QLEMAE--SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+A+ + +N ++TKGI P + +L Y + G M+K + F+ + +PD
Sbjct: 238 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM--QNKGMIPDT 295
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG---KMPLIIVE 382
+ L G +D A H + + G +E +Y L++ G K +I E
Sbjct: 296 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 355
Query: 383 RMQKD 387
M KD
Sbjct: 356 MMNKD 360
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 132/323 (40%), Gaps = 49/323 (15%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ + + D PD T S ++ ++K +AE ++E+M E G + YN +++
Sbjct: 103 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 162
Query: 90 YISNGQLDKVPQMLQELK------------------------------------KNTSPD 113
Y +G ++ ++ +++ K PD
Sbjct: 163 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 222
Query: 114 VVTYNLWLAACASQNDKETAE-KAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATT 171
+++Y+ L A+ D A+ L TK I P+ ++ L + Y + + +KA
Sbjct: 223 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 282
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
++M+ + + V +++++S +G D+ L + M+ + ++A Y C+I
Sbjct: 283 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 342
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNI-LLAAYINR----NQLEMAESFYNRLVTKGIK 286
GE KA+ + E + D P + ++ IN ++ + + +V G +
Sbjct: 343 HGELVKAKELISEMMN----KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 398
Query: 287 PCYTTWELLTWGYLKKGQMEKVL 309
P T+ L GY G ME+
Sbjct: 399 PNVVTFNSLMEGYCLVGNMEEAF 421
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 147/336 (43%), Gaps = 11/336 (3%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL- 106
C++++ + K+ +AE++++KM + G Y+ +++ + +DK ++L+++
Sbjct: 86 CNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV 145
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ T P+ +TYN + + + + F ++ + P + ++ K
Sbjct: 146 EAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTN 205
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLY---TNMGYKDEVLRIWKKMMSLFAKMNDAEYT 223
+A M + + + ++YS++L Y T+ D V I+ M++ N +
Sbjct: 206 EAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD-VHNIFNLMLTKGIAPNKHVFN 264
Query: 224 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 283
+I++ + G +KA I+++ ++ D ++++ +L+ A +N +V
Sbjct: 265 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV--PDHRLITAAYNKLEEQGD 341
G+ P + L G G++ K E + + K + P + ++ N L ++G
Sbjct: 325 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMM---NKDIPPPGVKYFSSIINNLCKEGR 381
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ + ++ + G + +NSL+ Y G M
Sbjct: 382 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 417
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 154/377 (40%), Gaps = 17/377 (4%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE++ +K PDT + ++ S + + +A M + G Y ++
Sbjct: 282 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 341
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK-KTKIDPDW 149
++G+L K +++ E+ K+ P V Y + + + K +++ +T P+
Sbjct: 342 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 401
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+++++L Y + E+A L M N Y +L+ Y G D+ L +++
Sbjct: 402 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 461
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ K Y+ ++ L + A+ ++ E T ++L N
Sbjct: 462 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 521
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A +L +K T+ ++ K G+ ++ E F S VP+ +
Sbjct: 522 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI--STYGLVPNIQTY 579
Query: 330 TAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRT------YAKAGKMPLIIVE 382
+ L ++ + A++L +++ +GH S + + N ++R AKA II E
Sbjct: 580 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 639
Query: 383 RMQKDNVQMDAETQKVL 399
+N+ ++A T +L
Sbjct: 640 ----NNLTLEASTISLL 652
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 116/259 (44%), Gaps = 1/259 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ Y EA AL++ M+ G Y +++ Y NG++D + ++
Sbjct: 403 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 462
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P V Y++ L A+K F E+ ++ +Y + +
Sbjct: 463 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 522
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+++ + + + ++ ++S +G + E ++ + + N Y+ +
Sbjct: 523 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 582
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I++L+K +E+A+N++ E D R+ N ++ +N+ ++ A ++ + + +
Sbjct: 583 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 642
Query: 286 KPCYTTWELLTWGYLKKGQ 304
+T LL + ++G+
Sbjct: 643 TLEASTISLLASLFSREGK 661
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 109/288 (37%), Gaps = 10/288 (3%)
Query: 24 QALQTRAREN----FFENLPDKMRGPDTCS--ALLHSYVQNKKS--AEAEALMEKMSECG 75
AL R N F+++ K PD S +LH Y S A+ + M G
Sbjct: 196 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 255
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAE 134
+N ++N Y G +DK + ++++ K PD VT+ +++ + A
Sbjct: 256 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 315
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY-SSLLSL 193
F + + P Y L KA + EM + V Y SS+++
Sbjct: 316 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 375
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G E I M+ + N + ++ +G E+A + D SI +
Sbjct: 376 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 435
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 301
+ L+ Y +++ A + + ++ KG+KP + ++ G +
Sbjct: 436 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 483
>gi|449442465|ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Cucumis sativus]
gi|449505643|ref|XP_004162530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Cucumis sativus]
Length = 475
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVV 115
+ K + EA +++ KMSE YN ++ L+ G++DK ++++E+ + P+++
Sbjct: 141 EAKLAKEALSILRKMSEFHLRADTTMYNLVIRLFTEKGEMDKAMELMKEMDSVDIHPNMI 200
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY L E A F ++K+ P+ + YS L + I++ + ++ LKEM
Sbjct: 201 TYISMLKGFCDVGRWEDAYGLFKDMKENGCAPNTVVYSVLVNGAIRLRIMDRLMEMLKEM 260
Query: 176 EKR--TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 233
EK+ TC N V Y+S++ G+ E L++ +M N + ++ K G
Sbjct: 261 EKQGGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEYGYAPNRVAVSFLVKEFCKDG 320
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
E+A + D + G + L+ + ++ AE + ++ G+KP
Sbjct: 321 HVEEAYKLIDRVVARGGVSYGDCYSSLVVTLVKMKKIAEAEKLFRNMLANGVKP 374
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 83/208 (39%), Gaps = 4/208 (1%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
D+ + + L C + A ++ + + D Y+ + L+ + +KA +
Sbjct: 128 DIRMFKIILNLCKEAKLAKEALSILRKMSEFHLRADTTMYNLVIRLFTEKGEMDKAMELM 187
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
KEM+ N + Y S+L + ++G ++ ++K M N Y+ +++ ++L
Sbjct: 188 KEMDSVDIHPNMITYISMLKGFCDVGRWEDAYGLFKDMKENGCAPNTVVYSVLVNGAIRL 247
Query: 233 GEFEKAENIYDEWESISGTGDPRV---PNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
++ + E E GT P +I+ + + LE A +R+ G P
Sbjct: 248 RIMDRLMEMLKEMEKQGGTCSPNTVTYTSIIQSLCEEGHPLE-ALKVLDRMEEYGYAPNR 306
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIG 317
L + K G +E+ + + +
Sbjct: 307 VAVSFLVKEFCKDGHVEEAYKLIDRVVA 334
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 143/356 (40%), Gaps = 61/356 (17%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P ++L+HSY + A L+ +M+ CG CP
Sbjct: 344 PSLFNSLVHSYCNARDYPYAYKLLNRMAGCG---CP------------------------ 376
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKET------AEKAFLELKKTKIDPDWISYSTLTSL 158
P V YN+++ + S + + AEK + E+ + + ++ +
Sbjct: 377 -------PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARC 429
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
M +KA +K M ++ + YS +++ ++ ++++M S+ +
Sbjct: 430 LCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPD 489
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
YT +I S K+G E+A + +DE ES+ + LL AY+ Q+ A ++
Sbjct: 490 VYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFH 549
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL-----ITAAY 333
R+V G P T+ L G K G+ +K E + K IG+ D + A
Sbjct: 550 RMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAP 609
Query: 334 NKLEEQGDIDG---------AEHLLVTLRNAG----HVSTEIYNSLLRTYAKAGKM 376
N + IDG A+ LL + + G H+ IY++L+ + K GK+
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHI---IYDALIDGFCKVGKL 662
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 138/341 (40%), Gaps = 43/341 (12%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+GA + +V AQ L N E P+ + AL+ + + K A+
Sbjct: 614 YGALIDGLCKAHKVVDAQELLDVMSSNGCE--PNHI----IYDALIDGFCKVGKLDNAQE 667
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACA 125
+ +MS+CG+L Y +++ + +LD ++L Q L+ + +P+VVTY +
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ + A K ++K +P+ ++Y++L K + + +M + C N V
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYV 787
Query: 186 AYSSLL-------------SLYTNM----------GYKDEVLRIWKKMMSLFAKMNDAE- 221
Y L+ SL + M GY V KK ++ + + E
Sbjct: 788 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELES 847
Query: 222 ---------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI---LLAAYINRNQ 269
Y +I S K G EKA ++ E +S + + + L+ A +Q
Sbjct: 848 HGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQ 907
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
LE A Y+ + KG+ P + + L G +K + + L+
Sbjct: 908 LEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQ 948
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 141/349 (40%), Gaps = 24/349 (6%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +ALLH+Y++ K+ +A + +M + G + Y+ +++ G+ K ++ ++
Sbjct: 527 TYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586
Query: 107 -----------------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+ +P+VVTY + + A++ + +P+
Sbjct: 587 IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNH 646
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I Y L + K+ + A M K Y+SL+ D +++ +
Sbjct: 647 IIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQ 706
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ N YT +I L ++GE +KA + E + L+ +
Sbjct: 707 MLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGK 766
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-RKWVPDHRL 328
++M+ + +++T+G P Y T+ +L G +++ + + K+V +
Sbjct: 767 VDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCS 826
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS-TEIYNSLLRTYAKAGKM 376
+ ++K + LL L + G VS +Y L+ +++KAG++
Sbjct: 827 VVQGFSK-----KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRL 870
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 5/270 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T AL+ + K +A+ L++ MS G + Y+ +++ + G+LD ++ +
Sbjct: 613 TYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM 672
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P V TY + A + A K ++ ++ P+ ++Y+ + ++
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGEC 732
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+KA L MEKR C N V Y+SL+ G D L+++ +M++ N Y +
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE-SFYNRLVTKG 284
I+ G ++A ++ E + T P+ + ++ +A L + G
Sbjct: 793 INHCCAAGLLDEAHSLLSEMKQ---TYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHG 849
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ + LL + K G++EK LE K+
Sbjct: 850 MVSIAPVYGLLIDSFSKAGRLEKALELHKE 879
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 160/359 (44%), Gaps = 10/359 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T A++ + ++ EAEA+ E++ E G + YN +L Y+ G L ++ E+
Sbjct: 293 TLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEM 352
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
+++ SPD TY+L + A A+ E+A E++ + + P+ +S + + Y
Sbjct: 353 ERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKW 412
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+K+ L+EM +R Y+ ++ + D L + +M + + + +
Sbjct: 413 QKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTL 472
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I K G KAE +++ + + NI++ ++ + + E ++ ++ ++G+
Sbjct: 473 IDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGL 532
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGSVRKWVPDHRLITAAYNKLEEQGDID 343
T+ L Y + G+ + +EC + K++G P + A N ++G +
Sbjct: 533 LANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVG----LKPSSTMYNALINAYAQRGLSE 588
Query: 344 GAEHLLVTLRNAG-HVSTEIYNSLLRTYA--KAGKMPLIIVERMQKDNVQMDAETQKVL 399
A + +R G S + NSL+ + + +++ M++++++ D T L
Sbjct: 589 QAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTL 647
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 4/295 (1%)
Query: 84 NHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N ++ + +G +++ L ++ N SP T + A + E AE F ELK+
Sbjct: 260 NDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKE 319
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ P +Y+ L Y+K + A + + EME+ + YS L+ Y N G +
Sbjct: 320 GGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWES 379
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
+ K+M + + N ++ +++S G+++K+ + E + + D N+++
Sbjct: 380 ARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMID 439
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
+ N L+ A + ++R+ +G++P TW L + K G K E F+ S
Sbjct: 440 TFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQES--GC 497
Query: 323 VPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
P N EQ + + LL +++ G ++ + Y +L+ Y ++G+
Sbjct: 498 SPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRF 552
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 119/292 (40%), Gaps = 11/292 (3%)
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA--ATTL 172
+TYN + ACA +D E A +++ D+++YS + + + +
Sbjct: 185 LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 244
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKL 232
E+E + + ++ + G + + + A VI++L
Sbjct: 245 AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNA 304
Query: 233 GEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
G E+AE I++E + R N LL Y+ L+ AES + + G P T+
Sbjct: 305 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364
Query: 293 ELLTWGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
LL Y G+ E K+ S VR P+ + + ++G + +L
Sbjct: 365 SLLIDAYANAGRWESARIVLKEMEASGVR---PNSYVFSRILASYRDRGKWQKSFQVLRE 421
Query: 352 LRNAGHVSTE--IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
+RN+G VS + YN ++ T+ K + L +RM+ + VQ DA T L
Sbjct: 422 MRNSG-VSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTL 472
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 40 DKMR----GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
D+MR PD T + L+ + ++ +AE L E M E G C YN M+N +
Sbjct: 455 DRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQ 514
Query: 94 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
+ + V +L +++ + +VVTY + + A + +K + P Y
Sbjct: 515 ERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMY 574
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+ L + Y + L E+A + M + + + +SL++ + E + + M
Sbjct: 575 NALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKE 634
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA--YINR 267
K + YT ++ +L+++ +F+K +Y+E T D + +L +A Y+ R
Sbjct: 635 NDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSALRYMER 691
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 2/269 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
LL + +N EA +L E M F + +L + G++ + +L ++K+
Sbjct: 216 GCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKE 274
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PD+V YN L A A E+KK P+ S++ L + K E ++
Sbjct: 275 AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDE 334
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A EM+ C + V Y++L+S + G D+ I M+ + Y C++
Sbjct: 335 AMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMM 394
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ K E E+ + +E I D + N ++ L+ A + + G+ P
Sbjct: 395 AHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 454
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAI 316
T+ L+ G+L +G + + + FK+ +
Sbjct: 455 GLDTYILMVHGFLSQGCLVEACDYFKEMV 483
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 124/297 (41%), Gaps = 38/297 (12%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++LL+ + + K EA+ ++ ++ E GF + YN++L Y G++ +L E+KK
Sbjct: 250 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 309
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N P+ ++ + + + + A + F E++ + + D ++Y+TL S + K +K
Sbjct: 310 VNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 369
Query: 168 AATTL-----------------------------------KEMEKRTCRKNRVAYSSLLS 192
A L +EM K C + Y++++
Sbjct: 370 AYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIR 429
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
L +G E +R+W +M + Y ++ + G +A + + E
Sbjct: 430 LVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLS 489
Query: 253 DPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
P+ + L A + +LEMA++ ++ + TKG + + W + G +++
Sbjct: 490 APQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKE 546
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
P V +L+ + + ++ A + + G +P + L K G +++ F+
Sbjct: 177 PEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFE 236
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAK 372
VR + P+ R T+ +G I A+H+LV ++ AG +YN+LL YA+
Sbjct: 237 DM--RVR-FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 293
Query: 373 AGKM--PLIIVERMQKDNVQMDAETQKVL 399
AGKM ++ M+K N +A + +L
Sbjct: 294 AGKMRDAFDLLAEMKKVNCGPNAASFTIL 322
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 140/353 (39%), Gaps = 55/353 (15%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P ++L+HSY + A L+++M++CG CP
Sbjct: 177 PSLFNSLVHSYCNARDYPYAYKLLKRMADCG---CP------------------------ 209
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKET------AEKAFLELKKTKIDPDWISYSTLTSL 158
P V YN+++ + + + AEK + E+ + + ++ +
Sbjct: 210 -------PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARC 262
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
M + A +K M + + YS +++ ++ ++++M S+ +
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPD 322
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
YT +I S K G E+A + +DE SI + + LL AY+ QL A +N
Sbjct: 323 VYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFN 382
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL-----ITAAY 333
R++ G P T+ L G K G+++K E + K IG+ D + A
Sbjct: 383 RMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAP 442
Query: 334 NKLEEQGDIDG---------AEHLL-VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
N + IDG A+ LL L N + IY++L+ + K GK+
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKI 495
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 137/341 (40%), Gaps = 43/341 (12%)
Query: 7 HGAQVRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEA 66
+GA + +V AQ L N E P+ + AL+ + + K A+
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCE--PNHI----IYDALIDGFCKVGKIDNAQE 500
Query: 67 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACA 125
+ +MS+CG+L Y +++ + +LD ++L Q ++ + +P+VVTY +
Sbjct: 501 VFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLC 560
Query: 126 SQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV 185
+ + A K +++ P+ ++Y+ L K + + +M + C N V
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV 620
Query: 186 AYSSLL-------------SLYTNM----------GYKDEVLRIWKKMMSLFAKMNDAE- 221
Y L+ SL + M GY V KK ++ + + E
Sbjct: 621 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELES 680
Query: 222 ---------YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI---LLAAYINRNQ 269
Y +I + K G E+A ++ E +S + + ++ L+ A +Q
Sbjct: 681 HGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQ 740
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
LE A Y+ + KG+ P + + L G +K + + L+
Sbjct: 741 LEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQ 781
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 120/289 (41%), Gaps = 15/289 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE P+ T AL+ + K +A+ L++ M G + Y+ +++ +
Sbjct: 431 YFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFC 490
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++D ++ + K P V TY + A + A K ++ ++ P+ +
Sbjct: 491 KVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVV 550
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + ++ +KA L ME++ C N V Y++L+ G D L+++ +M
Sbjct: 551 TYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQM 610
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ- 269
+ N Y +I+ G ++A ++ E + T P+ L Y + Q
Sbjct: 611 STKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQ---TYWPK----YLQGYCSVVQG 663
Query: 270 ----LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
+ L + G P + LL + K G++E+ LE K+
Sbjct: 664 FSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKE 712
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 92/240 (38%), Gaps = 13/240 (5%)
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
P+ ++Y TL + ++K + + M K C N ++SL+ Y N ++
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEK------AENIYDEWESISGTGDPRVPNIL 260
K+M Y I S+ E AE +Y+E + S +
Sbjct: 200 LKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 259
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIGS 318
+ +MA ++ KG P +T+ + + ++EK F+ K++G
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP 377
PD T + + G I+ A +R+ G + + Y +LL Y KA ++P
Sbjct: 320 ----NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLP 375
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 20/293 (6%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ PDV +YN + + + + + A + F ++ + + PD ++Y++L K +
Sbjct: 149 LRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEM 208
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC- 224
K+ L++M R N Y+SL+ Y+ G E +R++K+M S + + C
Sbjct: 209 VKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSS--SGLIPCVVNCN 266
Query: 225 -VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYN 278
I +L + ++A++I+D + G P+ PNI LL Y S N
Sbjct: 267 SFIHALCRHNRIKEAKDIFDSM-VLKG---PK-PNIISYSTLLHGYAAEGCFANMNSLVN 321
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+V+KGI P + + +L Y + G M+K + F+ + +PD + L
Sbjct: 322 LMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM--QNKGMIPDTVTFATVISSLCR 379
Query: 339 QGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG---KMPLIIVERMQKD 387
G +D A H + + G +E +Y L++ G K +I E M KD
Sbjct: 380 IGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD 432
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 17/274 (6%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+P + TYN+ + + E A F L +T + PD SY+TL + K +KA
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+M +++ + V Y+SL+ + R+ ++M+ + N+ Y +I
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTKGIKPC 288
G ++++ ++ E S SG P V N + A N+++ A+ ++ +V KG KP
Sbjct: 239 TAGMWKESVRVFKEMSS-SGL-IPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 296
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSV-----RKWVPDHRLITAAYNKLEEQGDID 343
++ L GY +G CF V + VP+HR N G +D
Sbjct: 297 IISYSTLLHGYAAEG-------CFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMD 349
Query: 344 GAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
A + ++N G + T + +++ + + G++
Sbjct: 350 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 383
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 150/352 (42%), Gaps = 15/352 (4%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + ++ PD T ++L+ + K+ ++E ++E+M + G YN ++ Y
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ G + ++ +E+ + P VV N ++ A N + A+ F + P+ I
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SYSTL Y + + M + N ++ L++ Y G D+ + I++ M
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + + VISSL ++G + A + ++ I V L+ N +L
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418
Query: 271 EMAESFYNRLVTKGIKPCYTTW-ELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
A+ + ++ K I P + + K+G++ + + + + ++ P+
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQR--PN---- 472
Query: 330 TAAYNKLEEQ----GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
+N L E G+++ A LL + + G + IY +L+ Y K G++
Sbjct: 473 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRI 524
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 12/286 (4%)
Query: 42 MRGPD----TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
++GP + S LLH Y A +L+ M G + +N ++N Y G +D
Sbjct: 290 LKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMD 349
Query: 98 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 156
K + ++++ K PD VT+ +++ + A F + + P Y L
Sbjct: 350 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLI 409
Query: 157 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 216
KA + EM + V Y S S+ N+ +K+ + K +M L +
Sbjct: 410 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFS--SIINNL-FKEGRVAEGKDIMDLMVQ 466
Query: 217 MNDAEYTCVISSLVK----LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
+SL++ +G E+A + D SI + + L+ Y +++
Sbjct: 467 TGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 526
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
A + + ++ KG+KP + ++ G + + + F + I S
Sbjct: 527 ALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 113/259 (43%), Gaps = 1/259 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 105
T ++L+ Y EA AL++ M+ G Y +++ Y NG++D + ++
Sbjct: 475 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 534
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K P V YN+ L A+K F E+ ++ +Y + +
Sbjct: 535 LHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCT 594
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+++ + + + ++ ++S +G + E ++ + + Y +
Sbjct: 595 DEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLM 654
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
IS+L+K +E+A+N++ E D R+ N ++ + + ++ A ++ + + +
Sbjct: 655 ISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNL 714
Query: 286 KPCYTTWELLTWGYLKKGQ 304
+T LL + ++G+
Sbjct: 715 TLEASTISLLASLFSREGK 733
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 34/176 (19%)
Query: 32 ENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
E++F +L + + T ALL+ YV+ +++ ++ + ++KM E GF PL YN ++ LY
Sbjct: 127 ESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYT 186
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
+ GQ +KVP DV+T E+K++ + PD S
Sbjct: 187 NVGQHEKVP------------DVLT----------------------EMKQSNVYPDNFS 212
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
Y + Y + LKEME++ ++ + Y+ L+SLY ++G K EVLR+W
Sbjct: 213 YRICINSYGAQSDIQGMENVLKEMERQPHIRDGLGYNHLISLYASLGNKAEVLRLW 268
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 62/249 (24%)
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y L + Y++ +K+ + L++M++ + + Y+ ++ LYTN+G ++V + +M
Sbjct: 142 TYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEM 201
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
++ Y I+S + + EN+ E E R P+I R+ L
Sbjct: 202 KQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEME--------RQPHI-------RDGL 246
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
YN L++ L W +EK +E F +GS+R +P +R
Sbjct: 247 G-----YNHLISLYASLGNKAEVLRLWS------LEKNVEAF---VGSLRIVIPMNR--- 289
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQ 390
+Y++L+ +AGK ++ M+ D +
Sbjct: 290 ------------------------------RMYHTLIMANIRAGKEVDGLLASMKADKIV 319
Query: 391 MDAETQKVL 399
D ET+K+L
Sbjct: 320 EDEETKKIL 328
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
N P + +YN + A K +L +K I PD +++ + + + P A
Sbjct: 106 NCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAA 165
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
L M + C N V Y +++S + Y+ E ++ KM+ L + A + ++
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM-------AESFYNRLV 281
L K G ++ E + ++ + NI + + LE AE++ +++V
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
KG++P T+ + +GY K G+++ K A + +VPD + + + GD
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA--KFKGFVPDEFTYCSLIIGVCQDGD 343
Query: 342 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
ID A L G S +YN+L++ ++ G
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 115/270 (42%), Gaps = 9/270 (3%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C+ + Y +N + EA L KM G +N ++++ G L + ++L ++
Sbjct: 185 CTVISGFYEENYQ-VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVL 243
Query: 108 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLE-------LKKTKIDPDWISYSTLTSLY 159
KN P++ T+N+++ + E A +E + ++PD +Y+T+ Y
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY 303
Query: 160 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 219
K+ + A+ LK+ + + + Y SL+ G D L ++++ + K +
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSI 363
Query: 220 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
Y +I L + G KA + ++ + D N+++ + A + N
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
+ KG P T+ L GY K+ +M+ +
Sbjct: 424 AIAKGYLPDIFTFNTLIDGYCKRLKMDNAI 453
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 136/342 (39%), Gaps = 9/342 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ L+ Q +A LM MS+ G YN ++N G + +L +
Sbjct: 367 NTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIA 426
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
K PD+ T+N + + + A + + PD I+Y+++ + K PE
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
T K + ++ C N + Y+ L+ E L + +++ + + + VIS
Sbjct: 487 VMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546
Query: 228 SLVKLGEFEKAENIYDEWES---ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
G+ ++A ++ E I T NI++ A+ + ++MA+ ++ + KG
Sbjct: 547 GFCNNGDLDEAYQLFRRMEQQYRICHT--VATYNIMINAFSEKLDMDMAQKLFHEMGDKG 604
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
P T+ ++ G+ K G + + K I +VP N L Q +
Sbjct: 605 CDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEI--GFVPSLTTFGRVINCLCVQHRVHE 662
Query: 345 AEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 386
A ++ + G V E ++ KA P IIVE + K
Sbjct: 663 AVGIVHLMVRTG-VVPEAVVTIFDADKKAVAAPKIIVEDLLK 703
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/369 (18%), Positives = 147/369 (39%), Gaps = 15/369 (4%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSEC 74
R+ V + + EN+ + +K PD T + +++ Y + K +A +++
Sbjct: 263 RKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFK 322
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETA 133
GF+ Y ++ +G +D + +E L K P +V YN + + Q A
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
+ ++ K + PD +Y+ + + KM A L + + +++L+
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
Y D + I M S + Y +++ L K K E++ + ++ I G
Sbjct: 443 YCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA---KPEDVMETFKMIMEKGC 499
Query: 254 -PRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
P + NIL+ + ++ A + +G+ P ++ + G+ G +++ +
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559
Query: 311 CFKKAIGSVRKWVPDHRLIT--AAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLL 367
F++ R H + T N E+ D+D A+ L + + G + Y ++
Sbjct: 560 LFRRMEQQYRIC---HTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMI 616
Query: 368 RTYAKAGKM 376
+ K G +
Sbjct: 617 DGFCKVGNV 625
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 160/364 (43%), Gaps = 30/364 (8%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY---NHMLN 88
+ + D PDT S LL YV N+K EA +L +M+E KCPL N M++
Sbjct: 271 LLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEA---KCPLDLTTCNIMID 327
Query: 89 LYISNGQLDKVPQMLQEL-----KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
+Y GQL +P+ L K P+V++YN L + A F ++
Sbjct: 328 VY---GQL-HMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSK 383
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ + ++Y+T+ ++Y K EKA ++EM KR N + YS+++S++ G D
Sbjct: 384 DVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRA 443
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++K+ S ++++ Y +I + + G A+ + E + PR I + A
Sbjct: 444 AILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNI--PRDTAIAILA 501
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRK 321
R + E F + +K + + + + K + V+E F+K +G
Sbjct: 502 RAGRIE-EATWVFRQAFDAREVKDI-SVFGCMINLFSKNKKYANVVEVFEKMREVG---- 555
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLII 380
+ PD +I N + + D A+ L + G V E++ +L Y + ++
Sbjct: 556 YFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLY--GARKDFVM 613
Query: 381 VERM 384
VE +
Sbjct: 614 VESL 617
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 154/337 (45%), Gaps = 22/337 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ LL + ++ K+ A L ++M + G Y+ ++ + +G D LQ++++
Sbjct: 148 NVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQ 207
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N S D+V Y+ + +D A F LK + I PD I+Y+++ +++ K +L +
Sbjct: 208 DNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFRE 267
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE-----Y 222
A L+EM + + V+YS+LL++Y + E L SLF++MN+A+
Sbjct: 268 ARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEAL-------SLFSEMNEAKCPLDLT 320
Query: 223 TC--VISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYN 278
TC +I +L ++A+ ++ W P V N LL Y + A +
Sbjct: 321 TCNIMIDVYGQLHMPKEADRLF--WSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFR 378
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+ +K ++ T+ + Y K + EK ++ + R P+ + + E+
Sbjct: 379 LMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEM--NKRGIEPNAITYSTIISIWEK 436
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 374
G +D A L LR++G + +Y +++ Y + G
Sbjct: 437 AGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTG 473
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 11/266 (4%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + YN+ L A F E+++ + PD +YSTL + + K L + +
Sbjct: 142 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFW 201
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L++ME+ + V YS+L+ L + + + I+ ++ + + Y +I+ K
Sbjct: 202 LQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGK 261
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
F +A + E + D + LLA Y++ + A S ++ + TT
Sbjct: 262 AKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTT 321
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE---QGDIDGAEHL 348
++ Y GQ+ E + S+RK +I+ YN L + D+ G
Sbjct: 322 CNIMIDVY---GQLHMPKEA-DRLFWSMRKMGIQPNVIS--YNTLLRVYGEADLFGEAIH 375
Query: 349 LVTLRNAGHVSTEI--YNSLLRTYAK 372
L L + V + YN+++ Y K
Sbjct: 376 LFRLMQSKDVQQNVVTYNTMINIYGK 401
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 1/261 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KN 109
++ ++ K EA L + M GF +N +++ Y G++++ +L ++K +
Sbjct: 518 MIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEG 577
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PDVV+Y + D + A + EL + P+ + Y+ L Y + A
Sbjct: 578 VQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAI 637
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L ME + V Y SL+ + G DE ++++ ++ YT +I L
Sbjct: 638 GVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGL 697
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K+G+ ++A N ++E S S + L+ AY E A ++ +V+ GI P
Sbjct: 698 CKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDN 757
Query: 290 TTWELLTWGYLKKGQMEKVLE 310
++ L G+ + ++K +E
Sbjct: 758 VSYNTLVTGFSQVDSLDKAIE 778
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 13/269 (4%)
Query: 29 RARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP---- 82
R + F L + P TC+ALL + + + ++M +C K P
Sbjct: 175 RLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDC---KTVTPNGYS 231
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKK---NTSPDVVTYNLWLAACASQNDKETAEKAFLE 139
Y M+ G++D ++L +L S V YNL + A + A +
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291
Query: 140 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 199
++++++ P +++ L + + + + L+EME N V + L+ + G+
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351
Query: 200 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 259
E +R++ +M+S K Y + +L K GE E+AE I +E S T + N
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411
Query: 260 LLAAYINR-NQLEMAESFYNRLVTKGIKP 287
++A + R +LE + +V +G+KP
Sbjct: 412 VVAGLLQRTGRLESVVRLISEMVKRGMKP 440
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 124/316 (39%), Gaps = 42/316 (13%)
Query: 57 QNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVV 115
Q ++ EA + KM E G N +++ + ++L+ + K D +
Sbjct: 454 QGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI 513
Query: 116 TYNLWLAACASQNDKETAEK----------------------AFLELKKTK--------- 144
TYN+ + C + E A K A+ +L K +
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573
Query: 145 ----IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ PD +SY T+ Y K + +KA L E+ + N V Y++L+ Y G
Sbjct: 574 KIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNI 633
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+ + M S+ + + Y ++ + G ++A+ ++++ S I+
Sbjct: 634 SGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIM 693
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ +++ A +++ + ++ I P T+ L + Y K G E+ + F + + S
Sbjct: 694 IQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSS-- 751
Query: 321 KWVPDHRLITAAYNKL 336
VPD+ +YN L
Sbjct: 752 GIVPDN----VSYNTL 763
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD S ++ Y + K +A + ++ CG + YN ++ Y NG + +
Sbjct: 580 PDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGV 639
Query: 103 LQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L ++ P VTY + + A+ F + +K I+ + Y+ + K
Sbjct: 640 LDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCK 699
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ ++A +EM R+ N++ Y++L+ Y G +E +++ +M+S ++
Sbjct: 700 IGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVS 759
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESI 248
Y +++ ++ +KA E SI
Sbjct: 760 YNTLVTGFSQVDSLDKAIEKAAEISSI 786
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPE 166
+ SP V T N L A A + K F E++ K + P+ SY+++ K+ +
Sbjct: 187 RRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVD 246
Query: 167 KAATTLKEMEKRTCRKNR--VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
L ++ +++ V Y+ L+ G DE +R+ +M + +
Sbjct: 247 DGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGI 306
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I+ L + F + + E E + T + + N L+ + + A ++ +V+K
Sbjct: 307 LINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKE 366
Query: 285 IKPCYTTWELLTWGYLKKGQMEK 307
+K T+ L+ K+G+ME+
Sbjct: 367 MKSTAVTYNLIARALCKEGEMER 389
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 5/296 (1%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
+ YN M+ Y GQLD +++ E+ PD TYN + + A E+
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP--VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
+ + PD ++Y+ L K ++A L EM + C + V Y+ +++ G
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D+ + K + S + N Y V+ L +E AE + E + N+L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
++ + +E A ++ G P ++ L + K+ +M+K + + R
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS--R 236
Query: 321 KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 375
PD L G++D A LL L++ G I YN+++ KAGK
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 34 FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLN 88
F +NLP P+T S +L ++ +AE LM +M + G CP + +N +++
Sbjct: 124 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG---CPPNVVTFNMLIS 180
Query: 89 LYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK-ID 146
G ++ ++L+++ K +P+ ++YN L A Q + A AFL+L ++
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA-MAFLDLMVSRGCY 239
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD +SY+TL + + + A L +++ + C ++Y++++ T G E L +
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 299
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+M+S + + Y+ + + L + E A + + + + + + N ++
Sbjct: 300 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 359
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
R + A + ++ G P +T+ +L G +G +++
Sbjct: 360 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKE 400
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 136/319 (42%), Gaps = 5/319 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+ + DK PD T + +++ Q + +A ++ + G + YN +L
Sbjct: 89 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 148
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ + + +++ E+ +K P+VVT+N+ ++ + E A + ++ K P+ +
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SY+ L + K + +KA L M R C + V+Y++LL+ G D + + ++
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
Y VI L K G+ ++A + +E S D + + A +++
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
E A + ++ GI+P + + G K+ + ++ F IG+ +P+ T
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN--GCMPNESTYT 386
Query: 331 AAYNKLEEQGDIDGAEHLL 349
L +G I A LL
Sbjct: 387 ILIEGLAYEGLIKEARDLL 405
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 107/263 (40%), Gaps = 1/263 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
S+ L + A + +++ E G L + Y M++ Y + G+ DK Q L K
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P + T + + AC+ AE F +K + D ++Y+ L Y K K
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ EM + Y+ L+ GY DE I +++ + +T VI
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G+F++A ++ + D + LL Y ++E A +N+L+ G+KP
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 288 CYTTWELLTWGYLKKGQMEKVLE 310
+ L GY G +EK E
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACE 639
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 5/267 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P++ Y+ +L+ S D A F E+ + + PD + Y+T+ Y + +KA
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ K + + L+ + G + +++ M + K++ Y ++ K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+ K + DE S + D NIL+ + + R ++ A + L+ +G P
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 292 WELLTWGYLKKGQM-EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + G+ K+G E + F A ++ PD +A + + ++ A L
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMK---PDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 351 TLRNAG-HVSTEIYNSLLRTYAKAGKM 376
L +AG +YN+L+ Y G +
Sbjct: 608 KLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ F N+ + D T + L+H Y + + + L+++M G YN +++
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G +D+ +++ EL ++ P + + + + + D + A + + ++ PD
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
++ S L Y K + EKA ++ + + V Y++L+ Y ++G
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 27 QTRARENFFENLPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+T FE L D+MR PD T + L+HS V EA ++ ++ GF+
Sbjct: 490 KTHQLNKVFE-LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 81 LPYNHMLNLYISNGQLDKVPQM---LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
L + ++ + G + + + +L+ PDVVT + L E A F
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLR--MKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+L + PD + Y+TL Y + EKA + M +R N + +L+
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 150/376 (39%), Gaps = 12/376 (3%)
Query: 37 NLPDKMRGPD------TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
NL DKM+ TC +LL Y + EA L +M GF + Y ++ Y
Sbjct: 419 NLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGY 478
Query: 91 ISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
I DK +L E+ +N S TYN+ + + ++ P
Sbjct: 479 IKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTT 538
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++Y+++ + ++K + A ++M ++ N V Y+S + Y D +++
Sbjct: 539 MTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 598
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + A Y I+ K G A + T + V N + Y N
Sbjct: 599 MRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKM 658
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 329
+ A FY ++ + I + L G+ K G + LE + + + + +PD +
Sbjct: 659 MAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLAN--HNIPDDKTF 716
Query: 330 TAAYNKLEEQGDIDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM--PLIIVERMQK 386
TA + L GDIDGA+ LL + R +T YN L+ + + GK+ + ++M
Sbjct: 717 TALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLS 776
Query: 387 DNVQMDAETQKVLKIT 402
V D T + +T
Sbjct: 777 SGVVPDDTTYNIFPLT 792
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 115/309 (37%), Gaps = 3/309 (0%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLA 122
E L +M E G L +N ++ + N Q + + + PDV TY +
Sbjct: 347 ETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIH 406
Query: 123 ACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRK 182
+ + A + ++K+ + P ++ +L Y + ++A EM +
Sbjct: 407 WLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPP 466
Query: 183 NRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY 242
N V Y++L+ Y D+ + +M + Y +I+ L + + + +
Sbjct: 467 NEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEML 526
Query: 243 DEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKK 302
+ S N ++ ++ + A + Y ++ KGI P T+ GY +
Sbjct: 527 KRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRT 586
Query: 303 GQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STE 361
+ ++ PD A N +QG++ A H LV L G +
Sbjct: 587 NCCDLAVKLLIYM--RCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVT 644
Query: 362 IYNSLLRTY 370
+YNS + Y
Sbjct: 645 VYNSFVTGY 653
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 136/390 (34%), Gaps = 74/390 (18%)
Query: 59 KKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKV----PQML----------- 103
+ + A ++ KM E G YN ++++ + G++D+ QML
Sbjct: 237 RDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFL 296
Query: 104 ----------------------QELKKNTSPDVVTYNLWLAACASQNDKETAEK------ 135
+ ++ +P VTY + + C ++ + K
Sbjct: 297 ATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMI 356
Query: 136 ----------------------------AFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
A +L PD +Y L K +
Sbjct: 357 EQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHE 416
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +M++ + + V SLL Y G DE L+++ +M N+ YT ++
Sbjct: 417 AVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMK 476
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+K F+KA + +E + NIL+ +++ + R V++G P
Sbjct: 477 GYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVP 536
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ + G++K G M L +++ + P+ T+ + D A
Sbjct: 537 TTMTYNSIINGFVKAGMMGSALAMYRQM--CEKGITPNIVTYTSFIDGYCRTNCCDLAVK 594
Query: 348 LLVTLR-NAGHVSTEIYNSLLRTYAKAGKM 376
LL+ +R N H YN+ + + K G M
Sbjct: 595 LLIYMRCNGIHPDIAAYNAFINMFCKQGNM 624
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 113 DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTL 172
D Y++ + AC A + F E+ + PD Y+ + K+ ++A L
Sbjct: 187 DAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVL 246
Query: 173 KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDAEYTCVISSLVK 231
+M + + Y+S++ + +G DE LR+ +M ++ KM+ T ++
Sbjct: 247 GKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCL 306
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
GE KA +++DE T +L+ + +++ +G+ P
Sbjct: 307 HGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYE 366
Query: 292 WELLTWGYLKKGQMEKVLECFKKAI----------GSVRKWVPDHRLITAAYN---KLEE 338
+ L+ G L+ Q E + F + G + W+ H + A N K++E
Sbjct: 367 FNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKE 426
Query: 339 QG 340
G
Sbjct: 427 AG 428
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 132/337 (39%), Gaps = 15/337 (4%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
++ ++NK+ +A AL + + + G Y +++ + ++ + + ++K+
Sbjct: 370 VIKGLLRNKQWEDAIALFDLVVDTGVPDV-FTYGCLIHWLSKHHKVHEAVNLWDKMKEAG 428
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
P +VT + L + + A K + E+ P+ ++Y+TL YIK + +KA
Sbjct: 429 VKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAY 488
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L EM + Y+ L++ + EV + K+ +S Y +I+
Sbjct: 489 ALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGF 548
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNIL-----LAAYINRNQLEMAESFYNRLVTKG 284
VK G A +Y + T PNI+ + Y N ++A + G
Sbjct: 549 VKAGMMGSALAMYRQMCEKGIT-----PNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNG 603
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQGDID 343
I P + + K+G M L + + V + Y L+ +
Sbjct: 604 IHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEAS 663
Query: 344 GAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLII 380
+ ++ R A TEIY +L+ ++K G + +
Sbjct: 664 KFYYSMIKQRIAA--DTEIYTTLIDGFSKVGNVAFAL 698
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 121/265 (45%), Gaps = 3/265 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P ++++ L D + ++ +LK K ++Y+TL +Y K ++A
Sbjct: 133 PSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVYGKAHKLDEAWGY 192
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
KEM+ C + +++L+SLY+ G ++VL ++ +M + ++ Y V+ K
Sbjct: 193 YKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVPHAGK 252
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+G + A +++ ++ + + L+A + +LE+ ++ + + I+P T
Sbjct: 253 VGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGT 312
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L Y K G++E L+ FK + P+ + A + + G +D A
Sbjct: 313 FASLIEAYCKSGRLETGLKFFKDM--EAFNYKPNLCIYAALVDAHAKAGMLDAALEFYER 370
Query: 352 LRNAG-HVSTEIYNSLLRTYAKAGK 375
+R G + I+ L+ +A+AGK
Sbjct: 371 MRGVGLWLPPLIFAVLIEQHAQAGK 395
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 1/259 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
L+ Y + K EA ++M + + +N +++LY GQ +KV ++ E++K
Sbjct: 176 LIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIG 235
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
S D V Y + + + A F +K P+ ++YS L + +K E
Sbjct: 236 CSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGT 295
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+EM R ++SL+ Y G + L+ +K M + K N Y ++ +
Sbjct: 296 KYFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAH 355
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G + A Y+ + P + +L+ + + E A Y + G++P +
Sbjct: 356 AKAGMLDAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSH 415
Query: 290 TTWELLTWGYLKKGQMEKV 308
T ++ K G+ + V
Sbjct: 416 FTCRIVVGAVAKGGKYDDV 434
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 143/325 (44%), Gaps = 10/325 (3%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPL---PYNHMLNLYISNGQLDKVPQMLQE 105
S LL++Y + K + +A+ +++ KCP+ YN ++ +Y +LD+ +E
Sbjct: 139 SILLNTYGRGK---DFQAVQRVLADLKADKCPMTTVAYNTLIKVYGKAHKLDEAWGYYKE 195
Query: 106 LKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ + PD+ T+N ++ + E + + E++K D + Y + K+
Sbjct: 196 MQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVPHAGKVGR 255
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ A + M+ + N VAYS+L++ G + + +++M SL + +
Sbjct: 256 LDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGTFAS 315
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I + K G E + + E+ + + + L+ A+ L+ A FY R+ G
Sbjct: 316 LIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVG 375
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ + +L + + G+ E + +++ G + P H + + G D
Sbjct: 376 LWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLR--PSHFTCRIVVGAVAKGGKYDD 433
Query: 345 AEHLLVTLRNAG-HVSTEIYNSLLR 368
E +L ++ G +V+ + +S+++
Sbjct: 434 VERILFEMQEMGLNVADAVNDSIVK 458
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 107/263 (40%), Gaps = 1/263 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 107
S+ L + A + +++ E G L + Y M++ Y + G+ DK Q L K
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
P + T + + AC+ AE F +K + D ++Y+ L Y K K
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+ EM + Y+ L+ GY DE I +++ + +T VI
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G+F++A ++ + D + LL Y ++E A +N+L+ G+KP
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 288 CYTTWELLTWGYLKKGQMEKVLE 310
+ L GY G +EK E
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACE 639
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 5/267 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P++ Y+ +L+ S D A F E+ + + PD + Y+T+ Y + +KA
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
+ K + + L+ + G + +++ M + K++ Y ++ K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+ K + DE S + D NIL+ + + R ++ A + L+ +G P
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 292 WELLTWGYLKKGQM-EKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
+ + G+ K+G E + F A ++ PD +A + + ++ A L
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMK---PDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 351 TLRNAG-HVSTEIYNSLLRTYAKAGKM 376
L +AG +YN+L+ Y G +
Sbjct: 608 KLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E+ F N+ + D T + L+H Y + + + L+++M G YN +++
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 90 YISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ G +D+ +++ EL ++ P + + + + + D + A + + ++ PD
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
++ S L Y K + EKA ++ + + V Y++L+ Y ++G
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 27 QTRARENFFENLPDKMRG----PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 80
+T FE L D+MR PD T + L+HS V EA ++ ++ GF+
Sbjct: 490 KTHQLNKVFE-LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 81 LPYNHMLNLYISNGQLDKVPQM---LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAF 137
L + ++ + G + + + +L+ PDVVT + L E A F
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLR--MKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 138 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
+L + PD + Y+TL Y + EKA + M +R N + +L+
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 27/334 (8%)
Query: 100 PQMLQEL---------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
PQ+L L N P+ +TYN L A + D A++ + + + PD
Sbjct: 7 PQVLARLVAEGERAGEGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTY 66
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT----NMGYKDEVLRI 206
+++TL + ++ A + M++ + V YS LL Y +MG +EVL
Sbjct: 67 TFNTLIAAFVARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVL-- 124
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
++M N Y +I VK GE + AE++ + ++ +L+ AY
Sbjct: 125 -ERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTR 183
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME-------KVLECFKKAIGSV 319
R AE +R+ +G++ + L Y K+G +E ++L ++ G
Sbjct: 184 RRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGS 243
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KM 376
+ P+ + N G GAE +L + AG I + +L+ Y++AG +
Sbjct: 244 KDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEG 303
Query: 377 PLIIVERMQKDNVQMDAET-QKVLKITSEMPVSE 409
++++RM+ V + T +L TS M + E
Sbjct: 304 AELVLKRMEAAGVSPNVLTYNTLLSATSRMGLRE 337
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 47 TCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T S LL Y + +AE ++E+M+ G YN+++ Y+ G++D +L+
Sbjct: 102 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 161
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ +P + Y + + A + D AEK +KK + + ++TL + Y K
Sbjct: 162 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGD 221
Query: 165 PEKAATTLKEM---------EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
E A L M + C N YS+L+++Y G + +M +
Sbjct: 222 VEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGW 281
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
N +T ++++ + G+ E AE + E+ + + N LL+A
Sbjct: 282 APNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSA 329
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL---- 106
L+ +Y + + + AE ++++M + G + ++N Y G ++ +L +
Sbjct: 177 LMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVA 236
Query: 107 ------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
K+ P+V TY+ + A AE + P+ I+++TL + Y
Sbjct: 237 EEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYS 296
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD---------EVLRIWKKMM 211
+ PE A LK ME N + Y++LLS + MG ++ VL+++ M
Sbjct: 297 RAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMR 356
Query: 212 SLFAKM-------NDAEYTCVISSLVKL 232
K ++A YT +++ L++
Sbjct: 357 RSAGKGGGLEKAPDEATYTVLLTCLLRF 384
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 137/289 (47%), Gaps = 3/289 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
N F + + PD T ++L+H+ + L+ +M L + ++ +++
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285
Query: 91 ISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G++ + +++ +++ PDVVTY + Q++ + A K F + + PD
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
ISY+TL + Y K+ +KA +EM ++ + Y++L+ ++G + + ++ +
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M++ + Y+ ++ SL K E+A + E+ + D +V NI++ +
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 318
LE A ++ L +KG+ P T+ ++ G K+G + + + F + G+
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 514
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 146/367 (39%), Gaps = 39/367 (10%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P T + L+ K EA L +KM + GF + Y ++N G ++L+
Sbjct: 135 PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 194
Query: 105 ELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL-------- 155
+++ N PDVV Y + + A F ++ I PD +Y++L
Sbjct: 195 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 254
Query: 156 -----TSLYIKME----LPE------------------KAATTLKEMEKRTCRKNRVAYS 188
T+L +M LP+ +A + M +R + V Y+
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 189 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESI 248
+L+ + DE ++++ M+ + YT +I+ K+ + +KA +++E
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Query: 249 SGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 308
D + N L+ + +L+ A + ++ +V +G P T+ +L K +E+
Sbjct: 375 EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA 434
Query: 309 LECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLL 367
+ K S PD ++ + + G+++ A L L + G H S YN ++
Sbjct: 435 MALLKAIEASNLN--PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492
Query: 368 RTYAKAG 374
K G
Sbjct: 493 HGLCKRG 499
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 136/331 (41%), Gaps = 6/331 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
+ LL S + K + +L +M G N ++N + ++ +L + LK
Sbjct: 69 AKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILK 128
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
PD T+ + + A F ++ P+ ++Y TL + K+
Sbjct: 129 LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 188
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+ ME+ C+ + V Y+S++ E ++ +M+ + YT ++
Sbjct: 189 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 248
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+L L E++ + ++ + D + + ++ A ++ A + ++ +G++P
Sbjct: 249 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK-WVPDHRLITAAYNKLEEQGDIDGAE 346
T+ L G+ + +M++ ++ F VRK + PD T N + ID A
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMM---VRKGFAPDVISYTTLINGYCKIHKIDKAM 365
Query: 347 HLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 376
+L + R T+ YN+L+ G++
Sbjct: 366 YLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 5/257 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + EA + + M GF + Y ++N Y ++DK +
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 367
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+E+ +K PD TYN + + A F E+ PD ++YS L K
Sbjct: 368 FEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 427
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E+A LK +E + Y+ ++ G + ++ + S +
Sbjct: 428 NRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWT 487
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I L K G +A ++ E + + D N + ++ N+ A ++
Sbjct: 488 YNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEML 547
Query: 282 TKGIKP--CYTTWELLT 296
+G C+ +L+
Sbjct: 548 ARGFSADSCFLMLSVLS 564
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 50/280 (17%), Positives = 111/280 (39%), Gaps = 10/280 (3%)
Query: 77 LKCPLPYN-------HMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQND 129
L PLP+ H +L+ N D + + L + P +V + L + A
Sbjct: 22 LSPPLPFFSSSQNNFHSKSLHF-NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 80
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
T ++ + P+ + + L + + + A + L ++ K + + +++
Sbjct: 81 YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 140
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 249
L+ G E L ++ KM+ + N Y +I+ L K+G A + E +
Sbjct: 141 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 200
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
D + ++ + Q+ A + ++++V +GI P T+ L + + V
Sbjct: 201 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 260
Query: 310 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ + S K +PD + + + L ++G + A ++
Sbjct: 261 TLLNQMVNS--KILPDVVIFSTVVDALCKEGKVTEAHEIV 298
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 30/352 (8%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+FF+ + P+ T + LL++ + K A L+ KM E G + YN +LN Y
Sbjct: 165 SFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWY 224
Query: 91 ISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G+ +++ + K + DV TYN+ + ++ ++K + P+
Sbjct: 225 CKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNE 284
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y+TL + +K A +EM N V Y++L+ + + G +E LR+
Sbjct: 285 ITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDV 344
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI----LLAAYI 265
M+S + N+ Y +++ + K +F ++ + + G RV +I ++
Sbjct: 345 MVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMR-MDGV---RVGHISYTTMIDGLC 400
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 325
LE A + ++ + P T+ +L G+LK G VP+
Sbjct: 401 KNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTG------------------LVPN 442
Query: 326 HRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNS-LLRTYAKAGKM 376
L + + G++ A + + +GHVS +S L+ ++ + G++
Sbjct: 443 RVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRL 494
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 121/299 (40%), Gaps = 23/299 (7%)
Query: 17 RQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGF 76
+ R A+ + R R+N P+++ T + L++ V+ K A + E+MS C
Sbjct: 262 KSRSAKGYLILRRMRKNMV--YPNEI----TYNTLINGLVKEGKIGVATKVFEEMSLCNL 315
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 135
L + YN ++ + SNG +++ ++ + P+ VTY L +
Sbjct: 316 LPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSS 375
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
++ + ISY+T+ K L E+A L +M K + + V +S L++ +
Sbjct: 376 VLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFL 435
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G N ++ +I + K+G ++A N Y D
Sbjct: 436 KTGLVP----------------NRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHF 479
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
++L+A++ +LE AE F + + G+ P T++ + Y G K F K
Sbjct: 480 TSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDK 538
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 137/331 (41%), Gaps = 9/331 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++ +Y + + +A ++ +KM+ G L Y +L + G +++ +
Sbjct: 515 TFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMH-- 572
Query: 107 KKNTSPDVVT---YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS-LYIKM 162
+ ++ P + YN L + + A E+ PD +Y++L + L K
Sbjct: 573 RPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKG 632
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
++ + + +EK N Y+SL+ G+ L +++ M++ + + +
Sbjct: 633 KMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAF 692
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
++ + G+ K +I S S + NILL Y R+ + YN ++
Sbjct: 693 NVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMII 752
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G P TW L GY K G ++ ++ +K +V + D + +KL E+ +I
Sbjct: 753 HGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKI--TVEGFKVDCFTLNVLVSKLCERNEI 810
Query: 343 DGAEHLLVTLRNAGHV-STEIYNSLLRTYAK 372
A L+ L G + + YNSL + +
Sbjct: 811 KMAFDLVKQLNMLGVTPNVDTYNSLFNGFVR 841
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 4/292 (1%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +++ + GQL++ +L+E L K S + V YN ++A A F E+
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
PD ++++L +++ E A ++M N V +++L+ + G
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E L++ M+ +++ Y +I +L K G EK +++E T NIL+
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ ++ A F ++ +G P T+ L G K+G++++ L F+K
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKL--QAEG 657
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
PD L +G D A LL G V ++ +N L+ + K
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 116/275 (42%), Gaps = 12/275 (4%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L K SP+ T+ L + A N+ + A ++ K P+ + Y TL K +
Sbjct: 202 LSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRV 261
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L+EM C + +++++ + + E ++ +M+ ND Y +
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESF-YNRLVT 282
+ L K ++A+ + +S P V N L+ ++ +L A +F Y++++
Sbjct: 322 MHGLCKTCRIDEAQAL------LSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMIN 375
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G P T+ L G KKG LE + P+ T + ++G +
Sbjct: 376 NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM--DAKGCKPNLNTYTILIDGFCKKGQL 433
Query: 343 DGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKAGKM 376
+ A +L + G ++T YN+L+ K GK+
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/297 (17%), Positives = 121/297 (40%), Gaps = 36/297 (12%)
Query: 46 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
+T + L+ + + + EA ++ +M GF + YN +++ +G++ + M E
Sbjct: 418 NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGE 477
Query: 106 LK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
+ K PD+ T+N + ++ E A + ++ + + ++++TL +++
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM------------- 211
++A + +M R C + + Y+ L+ G ++ L ++++M+
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597
Query: 212 -----SLFAKMNDA-----------------EYTCVISSLVKLGEFEKAENIYDEWESIS 249
K+++A Y +I+ L K G ++A N++++ ++
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657
Query: 250 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
D N L+ + A R V G P TW +L + + K+ E
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 146/334 (43%), Gaps = 11/334 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T ++ + Y ++K A + E+M + + YN +++ G++D+ +
Sbjct: 225 PDYFTSTSFILGYCRSKDVDSAFRVFEEMPN----RNEVSYNQLIHGLCEAGRIDEAVSL 280
Query: 103 LQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+K + P+V TY + +N A E+ + + PD I+Y++L + +
Sbjct: 281 FVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCR 339
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A L M++R ++ Y + +E R++ + N
Sbjct: 340 AGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIM 399
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y+ +I K+G+ ++A ++++ S + + + N L+ + L+ A S ++++V
Sbjct: 400 YSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV 459
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G+KP T+ +L LK+G + +C +K + S K P R A G
Sbjct: 460 KMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEK--PVARTYNAFIEVYCSAGK 517
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ AE ++V ++ G + Y SL++ Y K G
Sbjct: 518 VQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLG 551
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 5/293 (1%)
Query: 15 SYRQRV-AQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKM 71
SY Q + +A + + F + D P+ T +AL+ + K +A L+++M
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEM 318
Query: 72 SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDK 130
E + + YN ++ G LD ++L +K + PD TY ++ N
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A + F L + + + I YS L Y K+ ++A ++M + C N +++L
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNAL 438
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ + G E L ++ +M+ + K + +I ++K G+F+ A + S
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
R N + Y + +++ AE ++ +G+ P T+ L Y K G
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLG 551
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 147/374 (39%), Gaps = 18/374 (4%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + K P+ T +AL+H EA +L ++M + G +N ++ +
Sbjct: 419 LFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRML 478
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G D + LQ++ P TYN ++ S + AE +++K+ + PD
Sbjct: 479 KQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDF 538
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y++L Y K+ L A LK M C + + SL+ + Y E + +
Sbjct: 539 TYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVE--KSGETG 596
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + D S++ K+ EF+ +++E E T D + L++ L
Sbjct: 597 VESVSNFGDVPG----SNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENL 652
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH--RL 328
+A +++ +GI P + + K + + + I S +H L
Sbjct: 653 GIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTL 712
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQ 385
I Y E+G+ + + LR G+ EI + L+ K G + + E M+
Sbjct: 713 ICGLY----EEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEME 768
Query: 386 KDNVQMDAETQKVL 399
K+ T +L
Sbjct: 769 KNGCNFSPRTYSIL 782
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 138/347 (39%), Gaps = 57/347 (16%)
Query: 77 LKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEK 135
LKC YN +L L G +D++ Q+ E L++ S D+ T+NL + + A++
Sbjct: 157 LKC---YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQ 213
Query: 136 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 195
++ + + PD+ + ++ Y + + + A +EM R N V+Y+ L+
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLC 269
Query: 196 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G DE + SLF +M D C N+Y I G
Sbjct: 270 EAGRIDEAV-------SLFVRMKD---DCCYP------------NVYTYTALIKG----- 302
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME---KVLECF 312
+ R + A + ++ + + P T+ L G + G ++ ++L
Sbjct: 303 ---------LCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353
Query: 313 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 371
K+ R VPD R + L + ++ A L +L G + I Y+ L+ Y
Sbjct: 354 KE-----RGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYC 408
Query: 372 KAGKM--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 414
K GK+ + E+M N +A T L + S + E S+F
Sbjct: 409 KVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLF 455
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 149/321 (46%), Gaps = 16/321 (4%)
Query: 30 ARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP-LPYNHM 86
A F+ N+ DK PD C AL + A L+ + G + L YN +
Sbjct: 167 AAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNAL 226
Query: 87 LNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 145
++ + G++DK M+ + + PD+VTYN+ L C ++ E A K +++ + I
Sbjct: 227 ISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAI 286
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTL--KEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+PD SY+ L + K P+KA + K + K C + V+Y++++ + ++
Sbjct: 287 EPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC--DVVSYNTIIKAFCSISNNRRA 344
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++++M + +T +I + ++ G + A+ + D + D ++
Sbjct: 345 YKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDH 404
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
+ ++EMA S + +V KGI P ++ L G+ K ++ +V+ +++ + R
Sbjct: 405 HCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQ--RGSF 462
Query: 324 PD---HRLITAAY---NKLEE 338
PD ++LI A NKL +
Sbjct: 463 PDEVTYKLIIGALVRENKLSD 483
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 22/260 (8%)
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y T + Y+K L + A EM CR + Y+ + + D + KM
Sbjct: 12 YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
L ++ Y+ IS L + EF +N+ + E + D NI L N+ E
Sbjct: 72 PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-------- 323
A + R+V +G +P T+ ++ G K KK +V+ W+
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCK----------MKKFDAAVQFWLNMLDKGIR 181
Query: 324 PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG--HVSTEIYNSLLRTYAKAGKM--PLI 379
PD++ A L + G +D A L++ + + G VST +YN+L+ + +AG++ L
Sbjct: 182 PDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALA 241
Query: 380 IVERMQKDNVQMDAETQKVL 399
+V M + + D T VL
Sbjct: 242 MVSFMSRTGCKPDLVTYNVL 261
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALM-EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
PD S LL ++ + +A M KM GF + YN ++ + S + +
Sbjct: 288 PDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCD-VVSYNTIIKAFCSISNNRRAYK 346
Query: 102 MLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ +E+ +K +PDVVT+ + + A + + + A+K + + PD I Y+T+ +
Sbjct: 347 LFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHC 406
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K E A + +M ++ + V+Y++L++ + EV+ ++++M+ + ++
Sbjct: 407 KSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEV 466
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
Y +I +LV+ + A ++D+ T D + +L+ A
Sbjct: 467 TYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINA 509
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 107/245 (43%), Gaps = 5/245 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL-PYNHMLNLYISNGQLDKVPQ 101
PD T + LL+ EA L++KM EC ++ + YN +L + DK
Sbjct: 253 PDLVTYNVLLNYCCNEFMFEEAVKLLKKM-ECSAIEPDVYSYNQLLKAHCKANHPDKAYL 311
Query: 102 -MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
M+ ++ DVV+YN + A S ++ A K F E+ + I PD ++++ L ++
Sbjct: 312 FMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFL 371
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ + A L M +R+ Y++++ + G + I+ M+ +
Sbjct: 372 REGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVV 431
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +I+ K + ++Y++ D +++ A + N+L A ++++
Sbjct: 432 SYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQM 491
Query: 281 VTKGI 285
+ +G+
Sbjct: 492 MERGL 496
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 112/283 (39%), Gaps = 8/283 (2%)
Query: 56 VQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDV 114
+++ + A KM+ GF Y+ ++ + + +L++++K + PD+
Sbjct: 55 IRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDI 114
Query: 115 VTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
+N++L +N +E+A + F + + +PD ++++ + KM+ + A
Sbjct: 115 WAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLN 174
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS-LFAKMNDAEYTCVISSLVKLG 233
M + R + A +L + G D + ++S ++++ Y +IS + G
Sbjct: 175 MLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAG 234
Query: 234 EFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
+KA + D N+LL N E A ++ I+P ++
Sbjct: 235 RIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYN 294
Query: 294 LLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
L + K +K + V K VP +YN +
Sbjct: 295 QLLKAHCKANHPDKAY------LFMVTKMVPKGFCDVVSYNTI 331
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 162/347 (46%), Gaps = 47/347 (13%)
Query: 33 NFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
N F LP K P C+A++ Y +N++ EA L + M K + +N ML Y
Sbjct: 129 NLFNLLPYKWN-PVCCNAMVAGYAKNRQFDEARRLFDAMPA----KDLVSWNSMLTGYTR 183
Query: 93 NGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
NG++ Q +E+ + DVV++NL + D ++ + F ++ +P+ +S+
Sbjct: 184 NGEMRLGLQFFEEMAER---DVVSWNLMVDGFVEVGDLNSSWEFFEKIP----NPNTVSW 236
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
T+ + + +A +M R N VA++++++ Y + DE + S
Sbjct: 237 VTMLCGFARFGKIAEARRLFDQMPIR----NVVAWNAMIAAYVQNCHVDEAI-------S 285
Query: 213 LFAKM---NDAEYTCVISSLVKLGEFEKAENIYDE--WESISGTGDPRVPNILLAAYINR 267
LF +M N +T VI+ V++G+ ++A + ++ + +++ +++ Y+
Sbjct: 286 LFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQ------TAMISGYVQN 339
Query: 268 NQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR 327
+++ A +N++ + + W + GY + G+M++ L FK+ V+K +
Sbjct: 340 KRMDDARQIFNQISIRDV----VCWNTMIAGYSQCGRMDEALHLFKQM---VKKDIVSWN 392
Query: 328 LITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 374
+ A+Y ++ G +D A + ++ VS +NSL+ + G
Sbjct: 393 TMVASYAQV---GQMDAAIKIFEEMKEKNIVS---WNSLISGLTQNG 433
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 125/330 (37%), Gaps = 54/330 (16%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+A++ YVQNK+ +A + ++S ++ + +N M+ Y G++D+ + +++ K
Sbjct: 330 TAMISGYVQNKRMDDARQIFNQIS----IRDVVCWNTMIAGYSQCGRMDEALHLFKQMVK 385
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
D+V++N +A+ A + A K F E+K+
Sbjct: 386 K---DIVSWNTMVASYAQVGQMDAAIKIFEEMKE-------------------------- 416
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
KN V+++SL+S T G + L+ + M K + + + C +SS
Sbjct: 417 -------------KNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSS 463
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L + + ++ D V N L+ Y + AE + + +
Sbjct: 464 CAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDV--- 520
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
+W L Y G + L+ F K V PD + G ID L
Sbjct: 521 -VSWNSLIAAYALNGNGREALKLFHKM--EVEGVAPDEVTFVGILSACSHVGLIDQGLKL 577
Query: 349 LVTLRNAGHVS--TEIYNSLLRTYAKAGKM 376
+ A ++ E Y ++ +AG++
Sbjct: 578 FKCMVQAYNIEPLAEHYACMVDLLGRAGRL 607
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 16/291 (5%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
L+ PDV +YN + + + + + A + F ++ + + PD ++Y++L K +
Sbjct: 56 LRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEM 115
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
K+ L++M R N Y+SL+ Y+ G E +R++K+M S
Sbjct: 116 VKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSF 175
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRL 280
I +L + ++A++I+D + G P+ PNI LL Y S N +
Sbjct: 176 IHALCRHNRIKEAKDIFDSM-VLKG---PK-PNIISYSTLLHGYAAEGCFANMNSLVNLM 230
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
V+KGI P + + +L Y + G M+K + F+ + +PD + L G
Sbjct: 231 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM--QNKGMIPDTVTFATVISSLCRIG 288
Query: 341 DIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG---KMPLIIVERMQKD 387
+D A H + + G +E +Y L++ G K +I E M KD
Sbjct: 289 RLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD 339
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 20/293 (6%)
Query: 92 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
SNG D M + ++P ++ A C E A F L +T + PD S
Sbjct: 10 SNGWTDGHAPMRLLMLPPSTPTTSLIDVLPAECTG---PELALAVFGRLLRTGLGPDVCS 66
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
Y+TL + K +KA +M +++ + V Y+SL+ + R+ ++M+
Sbjct: 67 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 126
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQ 269
+ N+ Y +I G ++++ ++ E S SG P V N + A N+
Sbjct: 127 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSS-SGL-IPCVVNCNSFIHALCRHNR 184
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-----RKWVP 324
++ A+ ++ +V KG KP ++ L GY +G CF V + VP
Sbjct: 185 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEG-------CFANMNSLVNLMVSKGIVP 237
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+HR N G +D A + ++N G + T + +++ + + G++
Sbjct: 238 NHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 290
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 121/284 (42%), Gaps = 6/284 (2%)
Query: 32 ENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 89
E E + D P+ T ++L++ Y E+ + ++MS G + C + N ++
Sbjct: 119 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 178
Query: 90 YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 148
+ ++ + + + K P++++Y+ L A++ + I P+
Sbjct: 179 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 238
Query: 149 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 208
++ L + Y + + +KA ++M+ + + V +++++S +G D+ L +
Sbjct: 239 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 298
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW--ESISGTGDPRVPNILLAAYIN 266
M+ + ++A Y C+I GE KA+ + E + I G +I+ +
Sbjct: 299 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLF-K 357
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
++ + + +V G +P T+ L GY G ME+ L
Sbjct: 358 EGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALH 401
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 3/257 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + ++ PD T ++L+ + K+ ++E ++E+M + G YN ++ Y
Sbjct: 86 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 145
Query: 92 SNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
+ G + ++ +E+ + P VV N ++ A N + A+ F + P+ I
Sbjct: 146 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 205
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
SYSTL Y + + M + N ++ L++ Y G D+ + I++ M
Sbjct: 206 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 265
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ + + VISSL ++G + A + ++ I V L+ N +L
Sbjct: 266 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 325
Query: 271 EMAESFYNRLVTKGIKP 287
A+ + ++ K I P
Sbjct: 326 VKAKELISEMMNKDIPP 342
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 71/376 (18%), Positives = 143/376 (38%), Gaps = 71/376 (18%)
Query: 42 MRGPD----TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD 97
++GP + S LLH Y A +L+ M G + +N ++N Y G +D
Sbjct: 197 LKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMD 256
Query: 98 KVPQMLQELK-KNTSPDVVT-----------------------------------YNLWL 121
K + ++++ K PD VT Y +
Sbjct: 257 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLI 316
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISY--STLTSLYIKMELPEKAATTLKEMEKRT 179
C + + A++ E+ I P + Y S + +L+ + + E + M +
Sbjct: 317 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE-GKDIMDLMVQTG 375
Query: 180 CRKNRVAYSSLLSLYTNMGYKDEVLR---IWKKMM----------------SLFAKMNDA 220
R N V ++SL+ Y +G +E L +W ++ +F +M ++
Sbjct: 376 QRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIES 435
Query: 221 -------EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
Y V+ L + ++A + ++ +++ D NI+++A + + + A
Sbjct: 436 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 495
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
+ + + T G+ P T+ L+ +K+ E+ F S R PD RL+
Sbjct: 496 KELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGR--APDSRLLNHIV 553
Query: 334 NKLEEQGDIDGAEHLL 349
L ++ ++ A + L
Sbjct: 554 RMLLKKAEVAKASNYL 569
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/234 (17%), Positives = 90/234 (38%), Gaps = 5/234 (2%)
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
PE A + + + +Y++L+ ++ G D+ ++ KM+ + Y
Sbjct: 45 PELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNS 104
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I L K E K+E + ++ + + N L+ Y + + + + + G
Sbjct: 105 LIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 164
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
+ PC + ++++ + F + ++ P+ + + +G
Sbjct: 165 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMV--LKGPKPNIISYSTLLHGYAAEGCFAN 222
Query: 345 AEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
L+ + + G V +N L+ YA+ G M ++I E MQ + D T
Sbjct: 223 MNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 276
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 3/260 (1%)
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TYN+ L + E +EK E+ I PD ++STL + + PE+A + M
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + V Y+S++ +Y +G +E + +++K+ S+ K++ Y + + + G++
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDY 264
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ + E + + + N L+ ++ A+ +N + T G+ P T +L
Sbjct: 265 QSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSIL 324
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
Y + G ++ E ++ W D + + E G ++ AE +L ++ A
Sbjct: 325 VEMYTRVGAYDQAFEVYETL--KTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRA 382
Query: 356 GHVSTEI-YNSLLRTYAKAG 374
G + Y + + TYA G
Sbjct: 383 GCNPDHLTYRTAMNTYATKG 402
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 45/286 (15%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE + + PD T ++++ Y + + EA L EK+ + + Y + N+Y
Sbjct: 200 WFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYA 259
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + Q++QE++ + +SP+ V N + + A+K F E++ + + P +
Sbjct: 260 RAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPV 319
Query: 151 SYSTLTSLYIKMEL-----------------------------------PEKAATTLKEM 175
+ S L +Y ++ E+A LKEM
Sbjct: 320 TLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEM 379
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
++ C + + Y + ++ Y G D R++ K+++L K + +T +I + GE
Sbjct: 380 KRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEI 439
Query: 236 EKAENIYDE-WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
E+A I+DE ES + D RV +LL+ + MA+S RL
Sbjct: 440 EQASKIFDEMMESGCCSPDERVSGMLLSC------MAMAKSDDERL 479
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 134/300 (44%), Gaps = 12/300 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ML + + QL+ ++++E+ + PD T++ + E A K F +K
Sbjct: 146 YNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMK 205
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
I PD ++Y+++ +Y ++ +A ++++ + + V Y ++ ++Y G
Sbjct: 206 SEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQ 265
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++++ ++M + N ++ +L K G+ +A+ +++E + + P +IL+
Sbjct: 266 SIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILV 325
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGS 318
Y + A Y L T+G K + L ++ G Q E +L+ K+A +
Sbjct: 326 EMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCN 385
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLL--VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
PDH A N +G +D A + V N G T ++ ++R AG++
Sbjct: 386 -----PDHLTYRTAMNTYATKGMVDPARRMFDKVVALN-GKPDTPLFTVMIRACKLAGEI 439
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 131/305 (42%), Gaps = 4/305 (1%)
Query: 27 QTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
Q E E + + PD T S L++ + ++ EA E+M G + + YN
Sbjct: 158 QLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYN 217
Query: 85 HMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++++Y G++++ ++ ++LK N D VTY A D ++ + E++ +
Sbjct: 218 SVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDS 277
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
P+ + +TL K +A EM V S L+ +YT +G D+
Sbjct: 278 GSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQA 337
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++ + + K + A Y ++ + V+ G E+AE+I E + D +
Sbjct: 338 FEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNT 397
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + ++ A ++++V KP + ++ G++E+ + F + + S
Sbjct: 398 YATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMES-GCCS 456
Query: 324 PDHRL 328
PD R+
Sbjct: 457 PDERV 461
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 160/367 (43%), Gaps = 19/367 (5%)
Query: 44 GPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ 101
GP+ T + L+ ++ + + AE L+ M E G + +N M+N G+++ +
Sbjct: 222 GPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARK 281
Query: 102 MLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
+ E+ ++ +PD V+YN + A F E+ + I PD +++++L +
Sbjct: 282 VFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMC 341
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
K E+A T +++M +R + N V +++L+ + G+ D+ L + M K +
Sbjct: 342 KAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVV 401
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y +I+ +G ++A + E E+ D + +++AY A ++
Sbjct: 402 CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM 461
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
+ KG+ P T+ L + ++ FK I PD T+ + ++G
Sbjct: 462 LEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIK--LGLQPDEFTYTSLIDGHCKEG 519
Query: 341 DIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLK 400
+++ A L + AG + + TY+ +++ + K M+A+ Q + K
Sbjct: 520 NVESALSLHDKMVKAGVLPDVV------TYS-------VLINGLSKSARAMEAQ-QLLFK 565
Query: 401 ITSEMPV 407
+ E P+
Sbjct: 566 LYHEDPI 572
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 102/236 (43%), Gaps = 2/236 (0%)
Query: 75 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETA 133
G++ L YN +L L +S+ L + L +P+V TYN+ + A + ++ A
Sbjct: 151 GYVPSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 134 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 193
+++ P+ ++Y+TL + + + + A + M + + N V ++S+++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 194 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 253
G ++ +++ +M+ + Y ++ K G +A +++ E D
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 254 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
L+ LE A + ++ +G++ T+ L G+ KKG ++ L
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 4/284 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ F + K PD T ++L+H + A L+ +M E G + + +++ +
Sbjct: 316 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGF 375
Query: 91 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
G LD ++ +K+ P VV YN + + A + E++ + PD
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 435
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
++YST+ S Y K A ++M ++ + + YSSL+ + + ++K
Sbjct: 436 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKN 495
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M+ L + ++ YT +I K G E A +++D+ D ++L+ +
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
A+ +L + P T ++ L +K +++ VL K
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALMH-CCRKAELKSVLALLK 598
>gi|242043100|ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [Sorghum bicolor]
gi|241922798|gb|EER95942.1| hypothetical protein SORBIDRAFT_02g004410 [Sorghum bicolor]
Length = 735
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 16/308 (5%)
Query: 11 VRAQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEK 70
VR + +R +A R R F D C+ +L + +A L ++
Sbjct: 209 VRLHTAARRPLRALHALRRFRHEF-----DVQPQVHACNRVLGALAAAGHVEDALKLFDE 263
Query: 71 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQND 129
MSE G P+ + ++ G D++ +M+ ++ PDV Y + +
Sbjct: 264 MSEGGVQPIPVTFAIVVRALAHAGMTDRLLEMIGRMRNEVCRPDVFVYTALVKTMVRRGY 323
Query: 130 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSS 189
+ + + E++K ++PD ++Y+T+ + + E+AA KEM + R Y+S
Sbjct: 324 MDGCIRVWEEMEKDGVEPDTMAYATMVGGFCNTGMVEEAAELFKEMRSKGLLVARSVYAS 383
Query: 190 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIY-----DE 244
L+ Y G + R+ K+++ ++ + Y +IS L +G +KA N++ +E
Sbjct: 384 LIDGYVAAGRVGDGCRLLKELVDAGSRADLGIYNTLISGLCGIGREDKAHNLFRIVLQEE 443
Query: 245 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 304
S T P LLA Y + ++ N+L G+ + + K G+
Sbjct: 444 LMPSSDTVSP-----LLARYAEKGEMVTFFGLVNKLAELGLPVIEMLVDFMKLFAGKDGR 498
Query: 305 MEKVLECF 312
K +E F
Sbjct: 499 ELKAMEVF 506
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 123/272 (45%), Gaps = 6/272 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L++ +Q+KK +A AL+ KM E G + Y ++ + D ++ + +
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 554
Query: 107 KKNT-SPDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++N +PD YN+ A C S AE+A+ L + + ++Y++L + K
Sbjct: 555 EQNGLTPDEQAYNVLTDALCKSGR----AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 610
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ AA +++M C+ + YS LL +E L I +M K N YT
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+IS ++K G+ + A+++++E S + +++Y ++E AE + G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG 730
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
+ P T+ + G G +++ K+ +
Sbjct: 731 VTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV 762
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 154/388 (39%), Gaps = 62/388 (15%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTY- 117
K EAE L+ GF + + +++N Y ++D ++ + N D+ Y
Sbjct: 368 KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYG 427
Query: 118 ---NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE 174
N+ + C + KET + F + P+ ++Y+++ Y K+ + A K
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMF----ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKL 483
Query: 175 MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND-------AEYTCVIS 227
ME C N Y SL+ +D+ L K M+L KM + YT +I
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLI----QDKKLH---KAMALITKMQEDGITPGVITYTTLIQ 536
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K EF+ A +++ E T D + N+L A + E A SF LV KG+
Sbjct: 537 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVL 593
Query: 288 CYTTWELLTWGYLKKGQ-------MEKVLE-----------------CFKKAIGSV---- 319
T+ L G+ K G +EK++ C +K +
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSIL 653
Query: 320 -RKWVPDHRLITAAY----NKLEEQGDIDGAEHLLVTLRNAGH-VSTEIYNSLLRTYAKA 373
+ V + AY +++ ++G D A+ L + ++GH S Y + +Y K
Sbjct: 654 DQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKI 713
Query: 374 GKMPLI--IVERMQKDNVQMDAETQKVL 399
G++ ++ M++D V D T +
Sbjct: 714 GRIEEAEHLIGEMERDGVTPDVVTYNIF 741
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 105/275 (38%), Gaps = 17/275 (6%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ ++ ++ K A++L +M G Y ++ Y G++++ ++ E+++
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMER 728
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ +PDVVTYN+++ C + A + +P+ +Y L ++KM L
Sbjct: 729 DGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788
Query: 168 AATT----------------LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 211
L+ M K V YSS+++ + +E + M+
Sbjct: 789 HYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848
Query: 212 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 271
N+ YT +I + F KA + + + L+ + +
Sbjct: 849 GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908
Query: 272 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
A+S + L+ W++L G LK G ++
Sbjct: 909 RAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 107/294 (36%), Gaps = 47/294 (15%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PD VTYN + A + A + F L+++ + D + + L Y + KA
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
L M CR+N +Y+ L+ E L + M+ +N YT +I L K
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G A + DE + +G+ P T
Sbjct: 297 EGRIHDARGLLDE-----------------------------------MPLRGVVPSVWT 321
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE---QGDIDGAEHL 348
+ + GY K G+M+ L KA+ PD YN L G +D AE L
Sbjct: 322 YNAMIDGYCKSGRMKDALG--IKALMEQNGCNPDDW----TYNSLIYGLCGGKLDEAEEL 375
Query: 349 LVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
L G T I + +L+ Y KA ++ L + M N ++D + VL
Sbjct: 376 LNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 106/272 (38%), Gaps = 20/272 (7%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T ++L+ + + + A L+EKM G Y+ +L +L++ +L ++
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++V Y + ++ + + A+ F E+ + P +Y+ S Y K+
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRI 716
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A + EME+ + V Y+ ++ +MGY D K+M+ + N Y
Sbjct: 717 EEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTY--- 773
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ L F K I + SG N +L M R++ G+
Sbjct: 774 ---WLLLKHFLKMSLINAHYVDTSGM-------------WNWIELNMVWQLLERMMKHGL 817
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
P T+ + G+ K ++E+ +G
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLG 849
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/309 (18%), Positives = 121/309 (39%), Gaps = 6/309 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
L++ ++ + EA+ + +M G + Y +++ Y G + ++ + ++
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEH 486
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ TY + A ++++ I P I+Y+TL K +
Sbjct: 487 EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 546
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A + ME+ + AY+ L G +E + + K+ YT ++
Sbjct: 547 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVT---YTSLVD 603
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
K G + A + ++ + D ++LL A + +L A S +++ G+K
Sbjct: 604 GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKC 663
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+ ++ +K+G+ + F + I S K P T + + G I+ AEH
Sbjct: 664 NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK--PSATTYTVFISSYCKIGRIEEAEH 721
Query: 348 LLVTLRNAG 356
L+ + G
Sbjct: 722 LIGEMERDG 730
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 146/351 (41%), Gaps = 39/351 (11%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWL 121
EA +EKM + GF+ Y +++L + +G + ++ + + + P + TY+ +
Sbjct: 175 EAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALM 234
Query: 122 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC- 180
A + D ET E++ + P+ +++ + + ++A LK M+ C
Sbjct: 235 VALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCG 294
Query: 181 ----------------------------------RKNRVAYSSLLSLYTNMGYKDEVLRI 206
+ +RV Y +LL +++ G D +
Sbjct: 295 PDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEF 354
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W +M + + +T +I +L K+G+ ++A D + + N L+ +
Sbjct: 355 WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
N+L+ A +N + + G++ T+ L Y K G+ K ++ F+K VP+
Sbjct: 415 LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKM--KTNGIVPNI 472
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A+ L EQG ++ A+ L+ G I YN L+R Y KAG++
Sbjct: 473 VACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRV 523
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 5/226 (2%)
Query: 133 AEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A FL+L K+ I P +Y++L +K L E A +M+ C + Y+ L
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFL 830
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
G E+ ++++M+ K N + VI LVK +KA ++Y + S +
Sbjct: 831 DALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFS 890
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
P L+ + +LE A+ F+ ++ G P + +L G+ K+G +E E
Sbjct: 891 PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACEL 950
Query: 312 FKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
F++ + +R PD + + + L G +D A H L+ +G
Sbjct: 951 FRRMVKEGIR---PDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG 993
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 6/301 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ ++ + EA L M G Y ++ Y +G+ K + +++
Sbjct: 404 TYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKM 463
Query: 107 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K N P++V N L + A Q E A++ F LKK + PD I+Y+ L Y K
Sbjct: 464 KTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRV 523
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A L EME+ C V +SL+ DE +++++M + Y +
Sbjct: 524 DDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTL 583
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K G ++A ++ + + N LL ++++A R+
Sbjct: 584 LAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNC 643
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDG 344
P T+ + +G +K+ ++ F + ++K + PD+ + + + G I+
Sbjct: 644 FPDVLTYNTVIYGLIKENRVNYAFWLFHQ----MKKVIYPDYVTLCTLLPGVIKDGRIED 699
Query: 345 A 345
A
Sbjct: 700 A 700
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 6/277 (2%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 109
+ Y ++ +S +A EKM G + + N L G+L++ + LKK
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+PD +TYN+ + + A K E+++ DP+ + ++L K + ++A
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAW 562
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ M++ V Y++LL+ G E ++K M++ N + ++ L
Sbjct: 563 KMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K GE + A + ++ D N ++ I N++ A ++++ K I P Y
Sbjct: 623 CKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDY 681
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
T L G +K G++E K+ + V DH
Sbjct: 682 VTLCTLLPGVIKDGRIEDAFRVAKEFV----HHVGDH 714
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 111/266 (41%), Gaps = 5/266 (1%)
Query: 111 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
+P + YN + E A F ++K PD +Y+ K ++
Sbjct: 785 TPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFD 844
Query: 171 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 230
+EM R C+ N + ++ ++ D+ + ++ +MS Y +I L+
Sbjct: 845 LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL 904
Query: 231 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 290
KLG E+A+ ++E + + NIL+ + + +E A + R+V +GI+P
Sbjct: 905 KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964
Query: 291 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV 350
++ ++ G+++ L F++ + PD N L ++ A L
Sbjct: 965 SYSIMVDCLCMVGKVDDALHYFEEL--KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFD 1022
Query: 351 TLRNAGHVSTEI--YNSLLRTYAKAG 374
+RN G ++ ++ YN+L+ AG
Sbjct: 1023 EMRNRG-ITPDLYTYNALILNLGIAG 1047
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 141/353 (39%), Gaps = 51/353 (14%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ + D GPD T + L+ + K A+ L KM + Y +L+ +
Sbjct: 283 GILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKF 342
Query: 91 ISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
+G LD + + E++ + PDVVT+ + + A + A +KK + P+
Sbjct: 343 SDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNL 402
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y+TL +++ NR+ DE L ++
Sbjct: 403 HTYNTLICGLLRL--------------------NRL---------------DEALELFNS 427
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL-----LAAY 264
M SL + Y I K GE KA +++ ++ + VPNI+ L +
Sbjct: 428 MESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKT-----NGIVPNIVACNASLYSL 482
Query: 265 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVP 324
+ +LE A+ F+N L G+ P T+ +L Y K G+++ ++ + P
Sbjct: 483 AEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM--EENGCDP 540
Query: 325 DHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
+ +I + + L + +D A + ++ T + YN+LL K G++
Sbjct: 541 EVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRV 593
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 121/309 (39%), Gaps = 37/309 (11%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 107
++L+ ++ + + A L KM G YN L+ +G++ ++ + +E L
Sbjct: 792 NSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLF 851
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ +T+N+ + N + A + +L P +Y L +K+ E+
Sbjct: 852 RGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM----------------- 210
A +EM C N Y+ L++ + G + ++++M
Sbjct: 912 AKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVD 971
Query: 211 -MSLFAKMNDAE-----------------YTCVISSLVKLGEFEKAENIYDEWESISGTG 252
+ + K++DA Y +I+ L + E+A +++DE + T
Sbjct: 972 CLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITP 1031
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
D N L+ +E A Y L KG++P T+ L G+ G ++ +
Sbjct: 1032 DLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVY 1091
Query: 313 KK-AIGSVR 320
KK +G R
Sbjct: 1092 KKMMVGGCR 1100
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFL-KCPLPYNHMLNLYISNGQLDKVPQML 103
P T L+ ++ + EA+ E+M + G + CPL YN ++N + G ++ ++
Sbjct: 893 PWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL-YNILMNGFGKQGDVETACELF 951
Query: 104 QEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+ + K+ PD+ +Y++ + + A F ELK + +DPD + Y+ + + +
Sbjct: 952 RRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRS 1011
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ E+A + EM R + Y++L+ G +E ++++++ + N Y
Sbjct: 1012 QRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTY 1071
Query: 223 TCVISSLVKLGEFEKAENIY 242
+I G ++A +Y
Sbjct: 1072 NALIRGHSMSGNPDRAYAVY 1091
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAE 134
F P Y +++ + G+L++ Q +E L P+ YN+ + Q D ETA
Sbjct: 889 FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ F + K I PD SYS + + + A +E++ + V Y+ +++
Sbjct: 949 ELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGL 1008
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+E L ++ +M + + Y +I +L G E+A +Y+E + +
Sbjct: 1009 GRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNV 1068
Query: 255 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTW 292
N L+ + + A + Y +++ G +P T+
Sbjct: 1069 FTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 67/363 (18%), Positives = 142/363 (39%), Gaps = 11/363 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P+T S LL +N + A ++ +M+E L YN ++ I +++ +
Sbjct: 610 PNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWL 669
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY--STLTSLYI 160
++KK PD VT L E A + E D S+ + + I
Sbjct: 670 FHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILI 729
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 220
+ E+ + + C + V L+ G + ++ K+ F
Sbjct: 730 EAEIGQSILFAESLVCNTICEDDSVLI-PLVKFLCKHGKAVDAYNVFLKLTKSFCITPSL 788
Query: 221 E-YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 279
E Y +I L+K E A ++ + ++ T D N+ L A +++ Y
Sbjct: 789 EAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEE 848
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
++ +G KP T ++ +G +K ++K ++ + + + P + L +
Sbjct: 849 MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG--DFSPTPWTYGPLIDGLLKL 906
Query: 340 GDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQ 396
G ++ A+ + + G + + +YN L+ + K G + + RM K+ ++ D ++
Sbjct: 907 GRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSY 966
Query: 397 KVL 399
++
Sbjct: 967 SIM 969
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN M+N + ++++ + E++ + +PD+ TYN + E A K + EL+
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ 1060
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
++P+ +Y+ L + P++A K+M CR N ++ L
Sbjct: 1061 LKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 139/339 (41%), Gaps = 10/339 (2%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKV 99
PD S LL KK EA L+ M+E G CP + Y +++ + ++ K
Sbjct: 82 PDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGD-HCPPNVVSYTTVIHGFFKEDEVGKA 140
Query: 100 PQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSL 158
+ E L + PDVVT N + + AE+ ++ I PD +Y++L
Sbjct: 141 YTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHG 200
Query: 159 YIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN 218
Y+ ++A LK+M + N V YS L+ G E I M+ N
Sbjct: 201 YLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPN 260
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
A Y ++ G+ + N+ D D + NI + AY+ +L+ A +N
Sbjct: 261 VATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFN 320
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
++ +G+ P ++ + G K G+++ + F + I PD + T +
Sbjct: 321 KMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDD--GLSPDIVVFTNLIHGFSM 378
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 376
G + AE L + + G + ++ +++ K GK+
Sbjct: 379 YGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKV 417
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 159/378 (42%), Gaps = 10/378 (2%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
F + D+ PD TC++++ + + +AE ++ +M + + YN +++ Y+
Sbjct: 143 LFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYL 202
Query: 92 SNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
S+GQL + ++L+++ ++ P + VTY++ + A + + +++ +P+
Sbjct: 203 SSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVA 262
Query: 151 SYSTLTSLY-IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+Y L Y K +L E + M + R + ++ + Y G DE + + K
Sbjct: 263 TYGGLLHGYATKGDLVE-MNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNK 321
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
M + Y +I L K+G + A + + + + D V L+ + +
Sbjct: 322 MRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGK 381
Query: 270 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK-KAIGSVRKWVPDHRL 328
E AE + ++ +GI+P + + K+G++ + F I SV+ V +
Sbjct: 382 WEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNA 441
Query: 329 ITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLIIVERMQKD 387
I Y G +D LL + + G + +N+LL G P + D
Sbjct: 442 IIHGYFL---AGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLID 498
Query: 388 NVQMDAETQKVLKITSEM 405
+ D + VL + EM
Sbjct: 499 SCCEDGRIEDVLTLFREM 516
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 8/291 (2%)
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS-TLTSLYIKMELPE 166
K +P VTY + ++ C A A ++ KT + + IS++ L +L + +
Sbjct: 7 KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM--SLFAKMNDAEYTC 224
++ K C + +Y+ LL + +E + + M N YT
Sbjct: 67 AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
VI K E KA ++ E D N ++ ++ AE ++ K
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 344
I P TT+ L GYL GQ+++ + K+ S P+ + + L + G
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQM--SRHGQPPNGVTYSMLIDCLCKFGGHTE 244
Query: 345 AEHLLVT-LRNAGHVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMD 392
A +L + +++ G+ + Y LL YA G + + +++ M ++ V+ D
Sbjct: 245 AREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPD 295
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 140/370 (37%), Gaps = 49/370 (13%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C LL + + ++ E GF YN ++N + G + + E++
Sbjct: 191 CGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR 250
Query: 108 K-NTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKT----KIDPDWISYSTLTSLYIK 161
K P V++N + C S+N E LKKT +I PD +YS L K
Sbjct: 251 KRGLRPTTVSFNTLINGLCKSRNLDEG-----FRLKKTMEENRIYPDVFTYSVLIHGLCK 305
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A EM++R R N + +++L+ D + + +M+++ K +
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVM 365
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM--------- 272
Y +++ L K+G+ KA + DE + + D L+ Y LE
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425
Query: 273 --------------------------AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
AE +V G+KP T+ ++ GY KKG ++
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVK 485
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNS 365
+ K+ + P N L +QG + A LL + N G +I YN
Sbjct: 486 MGFKLLKEM--QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543
Query: 366 LLRTYAKAGK 375
LL + K GK
Sbjct: 544 LLEGHCKNGK 553
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 135/336 (40%), Gaps = 11/336 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P T S L++ +++ E L + M E Y+ +++ G+LD Q+
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E++ + P+ +T+ + ++A + ++ + PD + Y+TL + K
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ KA + EM+ + +++ Y++L+ Y G + + I K M +++
Sbjct: 376 VGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+T +IS + G AE E D +++ Y + ++M +
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G KP T+ +L G K+GQM+ + + PD YN L E
Sbjct: 496 INGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN--LGVTPDD----ITYNILLEGHC 549
Query: 342 IDGAEHLLVTLRNAGH--VSTEIYNSLLRTYAKAGK 375
+G L+ LRN V Y SL+ Y K+ K
Sbjct: 550 KNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLK 585
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 121/295 (41%), Gaps = 44/295 (14%)
Query: 24 QALQTRARENFFENLPDKM--RG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
L R + E L D+M RG P+ T +AL+ ++++ A +M G
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN +LN G ++K +++ E+K PD +TY + + D E+A
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA--- 417
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+E++K M + + VA+++L+S +
Sbjct: 418 -MEIRKG-------------------------------MNEEGVVLDNVAFTALISGFCR 445
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G + R ++M+ K +DA YT VI K G + + E + I+G +
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ-INGHKPGVI 504
Query: 257 P-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
N+L+ + Q++ A ++ G+ P T+ +L G+ K G+ E +L+
Sbjct: 505 TYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLK 559
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 156/394 (39%), Gaps = 69/394 (17%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN----------- 93
P ++L+H+Y + A A L +M+ CG CP P + N++I +
Sbjct: 341 PSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG---CP-PGYVVYNIFIGSICGREELPNPE 396
Query: 94 ----------------------------------GQLDKVPQMLQE-LKKNTSPDVVTYN 118
G+ +K Q+++E ++K PD TY
Sbjct: 397 LLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYT 456
Query: 119 LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
+ + A F E+KK ++PD +Y+ L + K L E+A + EM
Sbjct: 457 KVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSA 516
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C N V Y++LL Y + I+ +M+ N Y+ +I L K GE +KA
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKA 576
Query: 239 ENIY-------DEWES---ISGTG-DPRVPNI-----LLAAYINRNQLEMAESFYNRLVT 282
+Y D ES G D PN+ L+ ++ A + ++
Sbjct: 577 CEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLA 636
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G +P ++ L G+ K G+++ E F + ++P T+ +++ + G +
Sbjct: 637 AGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC--GYLPSVHTYTSLIDRMFKDGRL 694
Query: 343 DGAEHLLV-TLRNAGHVSTEIYNSLLRTYAKAGK 375
D A +L L+++ + + Y +++ K G+
Sbjct: 695 DLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 120/298 (40%), Gaps = 37/298 (12%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML-QELKK 108
AL+ + + + A+ + +M++CG+L Y +++ +G+LD ++L Q LK
Sbjct: 648 ALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 707
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
+ +P+VVTY + + E A ++K P+ ++Y+ L K +
Sbjct: 708 SCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAG 767
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTN-----------------------MGYKDEVLR 205
+M+ + C N V Y L++ GY+ V
Sbjct: 768 LELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQG 827
Query: 206 IWKKMMSLFAKMNDAE----------YTCVISSLVKLGEFEKAENIYDEWESISGT---G 252
K+ ++ + + E Y +I S K G E A ++ E +S +
Sbjct: 828 FSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMA 887
Query: 253 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ L+ A +Q+E A + Y+ + +GI P + + L G +++ + + L+
Sbjct: 888 SKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQ 945
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE P+ T AL++ + +K ++A L++ M G + Y+ +++ +
Sbjct: 595 YFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFC 654
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G++D ++ + K P V TY + + A K ++ K +P+ +
Sbjct: 655 KVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVV 714
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
+Y+ + K EKA L MEK+ C N V Y++L+ G D L ++ +M
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774
Query: 211 MSLFAKMNDAEYTCVISSLVKLG 233
+ N Y +I+ G
Sbjct: 775 KTKGCAPNYVTYRILINHCCAAG 797
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 112/287 (39%), Gaps = 19/287 (6%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ S+ + +A++ ++M G + Y +L+ Y+ + QL + +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544
Query: 103 LQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTK----------------I 145
+ + P+ +TY+ + + + A + + +L T I
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604
Query: 146 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
P+ ++Y L + K + A L M C N++ Y +L+ + +G D
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
++ +M + YT +I + K G + A + + S + ++
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+ E A + + + KG P T+ L G K G+++ LE F
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%), Gaps = 6/227 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +A++ + ++ +A L+ M + G + Y +++ G++D ++ ++
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K +P+ VTY + + C + + A E+K+T Y T + K L
Sbjct: 775 KTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLA 834
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE---Y 222
+ L+EME Y L+ ++ G + L + K+MM + + +N A +
Sbjct: 835 --SLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMH 892
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 269
T +I +L + E+A +Y E D L+ I RN+
Sbjct: 893 TSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNK 939
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 82 PYNHMLNL----YISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKA 136
P H N+ + +G++D + +++K + SPDVVTYN + C + AEK
Sbjct: 148 PTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKY 207
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
F+E+K I+P +SY+TL Y+ ++ + A ++EM+ + N + YS+LL +
Sbjct: 208 FVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCD 267
Query: 197 MGYKDEVLRIWKKMMSLF-AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 255
G E I K+M+ + A +++ + +ISS + G A ++ +S +
Sbjct: 268 AGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAG 327
Query: 256 VPNILLAAYINRNQLEMAESFYNRLVTKGI--KPCYT------TWELLTWGYLKKGQMEK 307
+L+ + Q + A ++L+ K I +P T + + GQ K
Sbjct: 328 HYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAK 387
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL-VTLRNAGHVSTEIYNSL 366
++ + + V D + ++G D A LL + LR Y+SL
Sbjct: 388 AEALVRQLL---KLGVQDSTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSL 444
Query: 367 LRTYAK 372
+++Y K
Sbjct: 445 VQSYLK 450
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+ +I S K G +++ ++ + E + + + L + R + MA+ ++N+++
Sbjct: 83 WVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKML 142
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
++GI+P T+ +L WG+ G+++ F+ R+ PD N
Sbjct: 143 SEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDM--KSREISPDVVTYNTMINGCYRVKK 200
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKV 398
+D AE V ++ T + Y +L++ Y ++ L +VE M+ ++ +A T
Sbjct: 201 MDEAEKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYST 260
Query: 399 L 399
L
Sbjct: 261 L 261
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 123/317 (38%), Gaps = 19/317 (5%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FFE++ + PD T + +++ + KK EAE +M + Y ++ Y+
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYV 231
Query: 92 SNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP-DW 149
S Q+D ++++E+K P+ +TY+ L A+ E+ I P D
Sbjct: 232 SVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDKYIAPKDN 291
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
+ L S + AA LK M + + Y L+ + G D+ +++ K
Sbjct: 292 SIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDK 351
Query: 210 MM--------SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++ M + Y +I L G+ KAE + + + G D N L+
Sbjct: 352 LIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKL-GVQDSTALNTLI 410
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV-- 319
+ + A ++ + + + ++ L YLKK + K A+GS+
Sbjct: 411 RGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADA----KAALGSMIE 466
Query: 320 RKWVPDHRLITAAYNKL 336
+PD L + L
Sbjct: 467 NDHLPDSSLFRSVMESL 483
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 144/318 (45%), Gaps = 21/318 (6%)
Query: 17 RQRVAQAQALQTRARENFFENLP-DKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECG 75
R+ V QAQ FF+ + + M T S L+ + S+EA L E+M E G
Sbjct: 171 RKHVKQAQ--------EFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERG 222
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAE 134
+ YN +L G +D+ ++ +E+ N +PD +Y++++ A ND +A
Sbjct: 223 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAF 282
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ +++ + P+ +Y+ + K E ++A L EM +R + +Y+++ + +
Sbjct: 283 QVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFH 342
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+ ++ LR+ +M + Y V+ L+++G F++ +++ E
Sbjct: 343 CDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAA 402
Query: 255 RVPNILLAAYI-NRNQLEMAESFYNRLVTKGIKPCYTTWELL-----TWGYLKK-----G 303
+++ + + +LE A ++ ++ GI P T ELL G+ ++ G
Sbjct: 403 STYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAG 462
Query: 304 QMEKVLECFKKAIGSVRK 321
+ME+ C + + SV +
Sbjct: 463 KMERSTSCVIQELSSVMR 480
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/266 (16%), Positives = 102/266 (38%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P+ + +Y + +A +M + G + +L + + + +
Sbjct: 123 PEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFD 182
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ P+ TY++ + D A K F E+++ D ++Y++L K
Sbjct: 183 KVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGN 242
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A +EM + +YS + Y + ++ +M N Y C
Sbjct: 243 VDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNC 302
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L K + ++A + DE + D N + A + + ++ A +R+ +
Sbjct: 303 IVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKEN 362
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
P T+ ++ L+ G+ ++V +
Sbjct: 363 CMPDRHTYNMVLKMLLRVGRFDRVTD 388
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 117/268 (43%), Gaps = 4/268 (1%)
Query: 47 TCSALLHSYVQNKKSA---EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 103
T ++L+ Y + + + L+++M E G + + ++N Y N ++
Sbjct: 228 TYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVF 287
Query: 104 QELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+E+K+ + VVTYN ++ S+ E K E++ + P+ I++ + + K
Sbjct: 288 EEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ A + M +R + V Y+ L+ Y +G ++ + + + M N Y
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
C+I+ + G++ A + DE + D N+L+ A + ++ A + +
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLE 310
G++P + T+ + G+ KG ++ E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/301 (17%), Positives = 116/301 (38%), Gaps = 36/301 (11%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T L++ Y +N +A A + E+M + G + YN +++ S G++++ ++++E+
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
Query: 107 K------------------------------------KNTSPDVVTYNLWLAACASQNDK 130
+ +N PDVV Y + +
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKM 385
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
E A + K I P+ +Y+ L + + + A+ L EM+++ + V Y+ L
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445
Query: 191 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 250
+ G + +++ +M + + N Y +I G + A I E
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
+ N+ + + +++ A N ++ K + P T+E + G ++KG +
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
Query: 311 C 311
C
Sbjct: 566 C 566
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 126/348 (36%), Gaps = 82/348 (23%)
Query: 106 LKKNTSPDVVTYNLWLAA-CASQNDKETAEKA---------------------------- 136
L++ SPD+ T+N ++ C ++ + A
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242
Query: 137 ---------FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 187
E+ + I P +++ L + Y K A +EM+++ + V Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302
Query: 188 SSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 247
+SL+S + G +E +++ ++M L N+ + CV+ K G A + D
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362
Query: 248 ISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ--- 304
+ D + IL+ Y ++E A + + KGI P TT+ L G+ + G
Sbjct: 363 RNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422
Query: 305 --------MEKVLE-------------CFKKAIGSVRKWV------------PDHRLITA 331
EK +E C K G VRK V P+H
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCK---GEVRKAVKLLDEMSEVGLEPNHLTYNT 479
Query: 332 AYNKLEEQGDIDGAEHLLVTL---RNAGHVSTEIYNSLLRTYAKAGKM 376
++G+I A + + R +V T YN ++ + + GKM
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT--YNVFIKYFCQIGKM 525
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 118/296 (39%), Gaps = 12/296 (4%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + N LA + AEKAF + ++ PD +++T+ S ++ KA
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI---WKKMMSLFAKMNDAEYTCVISS 228
K+++ + Y+SL+ Y G + + K+M+ + +I+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K A +++E + N L++ + ++E + G+ P
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGA 345
T+ + G+ KKG M + + R PD + ++ Y +L + D
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGM--TERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391
Query: 346 EHLLVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAETQKVL 399
+ + + +V+T YN L+ ++++G + +++ M++ ++ D T VL
Sbjct: 392 KEAMAKKGISPNVTT--YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 121/265 (45%), Gaps = 3/265 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P ++++ L D + ++ +LK K ++Y+TL +Y K ++A
Sbjct: 133 PSTYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVYGKAHKLDEAWGY 192
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
KEM+ C + +++L+SLY+ G ++VL ++ +M + ++ Y V+ K
Sbjct: 193 YKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVPHAGK 252
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
+G + A +++ ++ + + L+A + +LE+ ++ + + I+P T
Sbjct: 253 VGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGT 312
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L Y K G++E L+ FK + P+ + A + + G +D A
Sbjct: 313 FASLIEAYCKSGRLETGLKFFKDM--EAFNYKPNLCIYAALVDAHAKAGMLDAALEFYER 370
Query: 352 LRNAG-HVSTEIYNSLLRTYAKAGK 375
+R G + I+ L+ +A+AGK
Sbjct: 371 MRGVGLWLPPLIFAVLIEQHAQAGK 395
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 1/261 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ L+ Y + K EA ++M + + +N +++LY GQ +KV ++ E++K
Sbjct: 174 NTLIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQK 233
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
S D V Y + + + A F +K P+ ++YS L + +K E
Sbjct: 234 IGCSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEI 293
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
+EM R ++SL+ Y G + L+ +K M + K N Y ++
Sbjct: 294 GTKYFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVD 353
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ K G + A Y+ + P + +L+ + + E A Y + G++P
Sbjct: 354 AHAKAGMLDAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRP 413
Query: 288 CYTTWELLTWGYLKKGQMEKV 308
+ T ++ K G+ + V
Sbjct: 414 SHFTCRIVVGAVAKGGKYDDV 434
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 144/327 (44%), Gaps = 10/327 (3%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL---PYNHMLNLYISNGQLDKVPQML 103
+ S LL++Y + K + +A+ +S+ KCP+ YN ++ +Y +LD+
Sbjct: 137 SFSILLNTYGRGK---DFQAVQRVLSDLKADKCPMTTVAYNTLIKVYGKAHKLDEAWGYY 193
Query: 104 QELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
+E++ + PD+ T+N ++ + E + + E++K D + Y + K+
Sbjct: 194 KEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVPHAGKV 253
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ A + M+ + N VAYS+L++ G + + +++M SL + +
Sbjct: 254 GRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGTF 313
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
+I + K G E + + E+ + + + L+ A+ L+ A FY R+
Sbjct: 314 ASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRG 373
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
G+ + +L + + G+ E + +++ G + P H + + G
Sbjct: 374 VGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLR--PSHFTCRIVVGAVAKGGKY 431
Query: 343 DGAEHLLVTLRNAG-HVSTEIYNSLLR 368
D E +L ++ G +V+ + +S+++
Sbjct: 432 DDVERILFEMQEMGLNVADAVNDSIVK 458
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 145/370 (39%), Gaps = 49/370 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECG--------------------------------- 75
++L+H+Y + + A A E+M G
Sbjct: 170 TSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKA 229
Query: 76 --FLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKET 132
+ + YN ++ Y G ++ V +L ++ ++ ++ Y L A D+E
Sbjct: 230 ENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEK 289
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
F LK + P +Y + L+ K KA L+EM+K N++ Y+ ++
Sbjct: 290 CLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMD 349
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
Y G ++W+ M+S K + Y ++ + K G +KA + + ++
Sbjct: 350 GYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQA----- 404
Query: 253 DPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ +P I +L Y+ ++ A ++R+ T G++P ++ L G K QME
Sbjct: 405 NRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMEN 464
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSL 366
+ + + VP+ R TA GD++ A + ++ + Y +L
Sbjct: 465 ARLMLDEMLAN--GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGAL 522
Query: 367 LRTYAKAGKM 376
L+ K+G M
Sbjct: 523 LKACCKSGAM 532
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 150/357 (42%), Gaps = 10/357 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ +L+ + + + + + ++ CG Y ++ L+ G + K +L+E+ K
Sbjct: 275 TTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDK 334
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SP+ + Y + + A D A K + ++ + PD ++Y+ L + K +K
Sbjct: 335 HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDK 394
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+ ++ Y+S+L Y G+ + L ++ ++ + + Y ++S
Sbjct: 395 ALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLS 454
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L K + E A + DE + + R L Y +E A + R+ + +
Sbjct: 455 GLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAI 514
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT--AAYNKLEEQGDIDGA 345
+ L K G M++ +E F++ + K H IT + +G++ A
Sbjct: 515 DIVAYGALLKACCKSGAMQRAVEVFQQITDAGLK----HNRITYCTMLDGWARKGELSKA 570
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
LL ++ G H+ T Y S ++ ++G + + M++ ++++A T L
Sbjct: 571 RDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 627
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 4/328 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L+ Y ++ A A E M Y +++ Y ++ +E L +
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 196
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ + ++ AS + E AE F + K + P I Y+++ Y + E
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L +ME+ + N Y+++L+ + + +++ L + ++ + A Y C++
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 316
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G KA +I +E + + + + +++ Y A + +V+ G+KP
Sbjct: 317 TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 376
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ +L + K G+M+K L + + +P T+ + + G I A +
Sbjct: 377 VTYNILVHAFCKAGRMDKALGVLENI--QANRLLPTIETYTSILDGYVKGGHIQKALEVF 434
Query: 350 VTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++ AG + YNSLL AKA +M
Sbjct: 435 DRIKTAGLRPGVVSYNSLLSGLAKARQM 462
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 124/309 (40%), Gaps = 10/309 (3%)
Query: 91 ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
I G K+ Q + K P + Y L + A DK A F ++ + I P+
Sbjct: 111 IDAGNWHKIVNAFQVIDK---PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVH 167
Query: 151 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
Y++L Y + E A +EM + + N + S++S Y + G + ++K
Sbjct: 168 IYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKF 227
Query: 211 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 270
+ Y ++ + + G E E + + E G+ + +L +
Sbjct: 228 KAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDE 287
Query: 271 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT 330
E SF++RL G+ P T+ + + K G M K L+ ++ P+ +
Sbjct: 288 EKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM--DKHGVSPNKMIYA 345
Query: 331 AAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQK 386
+ GD A + + +AG + +I YN L+ + KAG+M L ++E +Q
Sbjct: 346 MIMDGYARGGDFTAAFKVWEDMVSAG-LKPDIVTYNILVHAFCKAGRMDKALGVLENIQA 404
Query: 387 DNVQMDAET 395
+ + ET
Sbjct: 405 NRLLPTIET 413
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 1/219 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++LL + ++ A ++++M G + Y + Y G ++K M Q +KK
Sbjct: 450 NSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 509
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N + D+V Y L AC + A + F ++ + + I+Y T+ + + K
Sbjct: 510 ENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSK 569
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A LK+M+K + + Y+S + G +EV M ++N YT +I
Sbjct: 570 ARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIH 629
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ + ++A + Y++ ++ D + N LL+ I+
Sbjct: 630 GWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLIS 668
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 140/295 (47%), Gaps = 17/295 (5%)
Query: 84 NHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKK 142
N++L+ + D+ P++L Q L + P++ T+ L CAS+ D + ++ K
Sbjct: 160 NNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIK 219
Query: 143 TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDE 202
+ I+PD +++L ++Y K A E+ +R + V++++L++ + GY
Sbjct: 220 SGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER----DVVSWTALITGFVAEGYGSG 275
Query: 203 VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 262
LRI+ +M++ N + ++ S L + + + ++ + S G+ V L+
Sbjct: 276 -LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 334
Query: 263 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKW 322
Y LE AE+ +NRL+ + + W ++ GY + GQ EK ++CF I R+
Sbjct: 335 MYAKNRFLEDAETIFNRLIKRDL----FAWTVIVAGYAQDGQGEKAVKCF---IQMQREG 387
Query: 323 V-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIY--NSLLRTYAKAG 374
V P+ + ++ + +D L AG S +++ ++L+ YAK G
Sbjct: 388 VKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDMFVASALVDMYAKCG 441
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 124/298 (41%), Gaps = 12/298 (4%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
+ + ++ +++ G + Q L + +P++ T+ L +C+S +D + ++ ++
Sbjct: 258 VSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI 317
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K +D + + L +Y K E A T + KR + A++ +++ Y G
Sbjct: 318 VKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR----DLFAWTVIVAGYAQDGQG 373
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
++ ++ + +M K N+ +S ++ + ++ +GD V + L
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 433
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 320
+ Y +E AE ++ LV++ +W + GY + GQ K L+ F+ +
Sbjct: 434 VDMYAKCGCVEDAEVVFDGLVSRDT----VSWNTIICGYSQHGQGGKALKAFEAMLD--E 487
Query: 321 KWVPDHRLITAAYNKLEEQGDI-DGAEHLLVTLRNAGHVST-EIYNSLLRTYAKAGKM 376
VPD + G I +G +H + G T E Y ++ +AGK
Sbjct: 488 GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 129/283 (45%), Gaps = 3/283 (1%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + LL+ + K +A+ L ++M E G +++ Y +G + K + + +
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM 495
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PDVVTYN + + E A++ + ++ +I P +IS+S L + + + L
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLV 555
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM+++ + V ++++ Y G + M+S + Y +
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+S VK F++A + + E + N +L + +++ AE ++++ KGI
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
P +T+ L GY+ K M++ + + R +VPD +
Sbjct: 676 NPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ--RGFVPDDKF 716
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 127/302 (42%), Gaps = 9/302 (2%)
Query: 40 DKMRG----PDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 93
+KM+G PDT + L++ Y +N + A + +M E G + + YN +LN
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447
Query: 94 GQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
LD ++ +E+ ++ PD T + + A F + + PD ++Y
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+TL + K+ EKA +M R + +++S L++ + ++G E R+W +M
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
K +I ++ G KA + + S D N L+ +++ +
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627
Query: 273 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 332
A N + +G+ P T+ + G+ + G+M++ K I + PD T+
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMID--KGINPDKSTYTSL 685
Query: 333 YN 334
N
Sbjct: 686 IN 687
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 121/291 (41%), Gaps = 7/291 (2%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + ++++ ++ K + +M E G + YN ++N Y G + + ++ +
Sbjct: 226 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM 285
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K P + TYN + + E A++ E+ + P+ +++ + + E
Sbjct: 286 AGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDV 345
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A EM +R + +++SS++ +++ G L ++KM + + YT +
Sbjct: 346 WEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTIL 405
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I+ + + A + +E D N LL L+ A+ + +V +G+
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 336
P + T L GY K G M K L F+ ++R PD YN L
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETM--TLRSLKPD----VVTYNTL 510
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 147/366 (40%), Gaps = 25/366 (6%)
Query: 33 NFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKM---SECGFLKC---------- 79
N + + P + L+H VQ+KK EA++L+ ++ S ++
Sbjct: 87 NLIQTIASTSPNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSS 146
Query: 80 -------PLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKE 131
+ ++ ++ Y+ +L + + Q L K+ + N L A +
Sbjct: 147 NLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVD 206
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A K + + K+ + + + + + K + L EME++ + V Y++L+
Sbjct: 207 LAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLV 266
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+ Y G E + M K Y +I+ L K G +E+A+ + DE +
Sbjct: 267 NAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLC 326
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 311
+ N +L + + AE +N ++ +G+ P ++ + + + G++ + L
Sbjct: 327 PNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAY 386
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
F+K G VPD + T N D+ GA + + G V + YN+LL
Sbjct: 387 FEKMKGV--GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGL 444
Query: 371 AKAGKM 376
+ GKM
Sbjct: 445 CR-GKM 449
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 33 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 90
+ FE + + PD T + L+ + + + +A+ L M + ++ ++N +
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 549
Query: 91 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 149
S G + + ++ E+K K P +VT N + + A + + PD
Sbjct: 550 CSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDC 609
Query: 150 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 209
I+Y+TL + ++K E ++A + ME+R N V Y+++L ++ G E + K
Sbjct: 610 ITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHK 669
Query: 210 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 244
M+ + + YT +I+ V ++A ++DE
Sbjct: 670 MIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDE 704
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 7/292 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
PDVVTY + + A Q + A F +L K PD I Y TL + K P
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
K M+ + Y+ L++++ G + VL + ++++ + + Y +I
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
L F KA +++ + + IL+ AY +++ A ++ ++ +G +P T
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ L GY K E E ++K +G + P+ + + L ++G ++ A L
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGD--RVSPNIVSYSILIDGLCKKGLMEEAS-LAFQ 754
Query: 352 LRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
H+ ++ Y L+R Y K G++ +++ + M + + D QK L
Sbjct: 755 CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 125/292 (42%), Gaps = 15/292 (5%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + L+ + + EA AL ++ + GF + Y +++ + Q+
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577
Query: 103 LQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+ ++ N PD+ YN+ + + E + E+ K ++PD ++Y+T+ Y
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+++ KA + ++ + N + ++ L+ Y G D+ + I+ M+ + N
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN-----ILLAAYINRNQLEMAESF 276
Y+C+I K E A +Y++ GD PN IL+ + +E A
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKM-----LGDRVSPNIVSYSILIDGLCKKGLMEEASLA 752
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 328
+ + + + P + +L GY K G++ + + + + V +PD L
Sbjct: 753 FQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHML--VNGIMPDDLL 802
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 131/292 (44%), Gaps = 14/292 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y + N ++ G+++K + L ++ P +V N L N A F +
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
++ P+ +++STL ++Y K ++A + M ++ + V YS L++ G +
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW--ESISGTGDPRVP-- 257
E ++ ++ KM+ ++ ++ + V++G+ KA +Y E IS P V
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGIS----PNVVTY 383
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
+IL+ ++ A + +++ +G++P T+ L G+ K E + + F
Sbjct: 384 SILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS---ENLRDGFGLYGI 440
Query: 318 SVRKW-VPDHRLITAAYNKLEEQGDIDGAEHLLV-TLRNAGHVSTEIYNSLL 367
+RK VPD + + N L QG +D A ++ ++ ++N+L+
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 124/332 (37%), Gaps = 40/332 (12%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ SP++VT++ + + + A + + + I PD + YS L + +
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+ + R + + V +SS++ Y +G + + ++ +M+ N Y+ +
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNRLVTK 283
I+ L + G +A ++ + + +P V L+ + L Y ++ K
Sbjct: 387 INGLCRNGRVLEACGVFGQI--LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444
Query: 284 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----------------GSVR------- 320
G P +L G ++G M++ L F +A+ G R
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504
Query: 321 ----------KWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRT 369
K +PD T L EQG +D A L L G IY +L+
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDG 564
Query: 370 YAKA--GKMPLIIVERMQKDNVQMDAETQKVL 399
+ K L I + MQ + + D VL
Sbjct: 565 FCKKRDPATGLQIFKLMQSNGIFPDICIYNVL 596
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 31 RENFFENLPDKMRG-------PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP- 80
RE EN+ + +R PD T + ++ Y K ++A L E + +CG + P
Sbjct: 602 REGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL-KCGRTQ-PN 659
Query: 81 -LPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+ + +++ Y +G++D + L++ P+++TY+ + + E+A + +
Sbjct: 660 AITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYE 719
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
++ ++ P+ +SYS L K L E+A+ + R + +AY L+ Y +G
Sbjct: 720 KMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVG 779
Query: 199 YKDEVLRIWKKMM 211
E + ++ M+
Sbjct: 780 RLAEAMMLYDHML 792
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 18/316 (5%)
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
N P+ +TYN L A + D A++ + + + PD +++TL + ++ A
Sbjct: 18 NLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAA 77
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYT----NMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
+ M++ + V YS LL Y +MG +EVL ++M N Y
Sbjct: 78 EKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVL---ERMARDGVAPNSYTYNY 134
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
+I VK GE + AE++ + ++ +L+ AY R AE +R+ +G
Sbjct: 135 LIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEG 194
Query: 285 IKPCYTTWELLTWGYLKKGQME-------KVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
++ + L Y K+G +E ++L ++ G + P+ + N
Sbjct: 195 VQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYA 254
Query: 338 EQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG--KMPLIIVERMQKDNVQMDAE 394
G GAE +L + AG I + +L+ Y++AG + ++++RM+ V +
Sbjct: 255 RAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVL 314
Query: 395 T-QKVLKITSEMPVSE 409
T +L TS M + E
Sbjct: 315 TYNTLLSATSRMGLRE 330
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 47 TCSALLHSYVQNKKS-AEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 105
T S LL Y + +AE ++E+M+ G YN+++ Y+ G++D +L+
Sbjct: 95 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 154
Query: 106 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ +P + Y + + A + D AEK +KK + + ++TL + Y K
Sbjct: 155 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGD 214
Query: 165 PEKAATTLKEM---------EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 215
E A L M + C N YS+L+++Y G + +M +
Sbjct: 215 VEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGW 274
Query: 216 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
N +T ++++ + G+ E AE + E+ + + N LL+A
Sbjct: 275 APNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSA 322
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL---- 106
L+ +Y + + + AE ++++M + G + ++N Y G ++ +L +
Sbjct: 170 LMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVA 229
Query: 107 ------KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 160
K+ P+V TY+ + A AE + P+ I+++TL + Y
Sbjct: 230 EEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYS 289
Query: 161 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD---------EVLRIWKKMM 211
+ PE A LK ME N + Y++LLS + MG ++ VL+++ M
Sbjct: 290 RAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMR 349
Query: 212 SLFAKM-------NDAEYTCVISSLVKL 232
K ++A YT +++ L++
Sbjct: 350 RSAGKGGGLEKAPDEATYTVLLTCLLRF 377
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 12/364 (3%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
VA + TR N E + P+ T + + + + ++ +A + ++M + G
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKA 136
+ Y +++ + G+LDK ++ +++ ++ SPD VTY + D ET ++
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+ E++ PD ++Y+ L K ++A L M + N Y++++
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD-PR 255
DE L + + M SL K Y I K G+ KA D +E++ G P
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA---IDTFETMKKRGIMPS 479
Query: 256 VP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
+ N L ++ AE +N L G+ P T+ +L Y K GQ++K +
Sbjct: 480 IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLS 539
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ I + PD +I + N L + G +D A + L+N T + YN LL K
Sbjct: 540 EMIS--KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGK 597
Query: 373 AGKM 376
GK+
Sbjct: 598 EGKI 601
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 137/351 (39%), Gaps = 38/351 (10%)
Query: 62 AEAEALMEKMSECGFLKCPLPYNHMLNLYISN---------------------------- 93
A + KM+E GF+ YN +++L +
Sbjct: 183 GRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALM 242
Query: 94 ------GQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
G K+ +L+E+K P++ TY + + A + A F E+
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI 206
PD I+Y+ L +KA +M + +RV Y +L+ + +G + V R
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362
Query: 207 WKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
W +M + YT +I +L K G+ ++A ++ D + + N ++ +
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422
Query: 267 RNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 326
+L+ A + + G+KP ++ L Y K G K ++ F+ R +P
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETM--KKRGIMPSI 480
Query: 327 RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
A+ L E G I AE + L G + YN L++ Y+KAG++
Sbjct: 481 AACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQI 531
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-L 106
C+A L++ + + +EAE + + +CG + YN ++ Y GQ+DK Q+L E +
Sbjct: 483 CNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI 542
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K PDV+ N + + A K F LK K+ P ++Y+ L + K
Sbjct: 543 SKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKIL 602
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
KA M + C N + ++SLL + D L+++ +M + + Y +I
Sbjct: 603 KALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662
Query: 227 SSLVKLGEFEKA 238
L++ G + A
Sbjct: 663 YGLIREGRIDYA 674
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 121/271 (44%), Gaps = 5/271 (1%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + +YN + N E A + F ++K P+ +Y+ L + K + K
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVK 231
EM R C N + ++ ++S ++ L ++ ++MS Y +I L+K
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913
Query: 232 LGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTT 291
G E+A I++E + + NIL+ + +++ A + ++V +GI+P +
Sbjct: 914 AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973
Query: 292 WELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVT 351
+ +L G++++ ++ F++ + PD N L + +D A L
Sbjct: 974 YTILVECLCITGRIDEAVQYFEEL--KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSE 1031
Query: 352 LRNAGHVSTEI--YNSLLRTYAKAGKMPLII 380
++N G +S ++ YN+L+ AGK+ + +
Sbjct: 1032 MKNRG-ISPDLYTYNALILHLGIAGKVDVAV 1061
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 108/248 (43%), Gaps = 1/248 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK- 107
+ L+ + + + +A L E M G YN +L+ + + +++K+ + E++
Sbjct: 800 NCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRS 859
Query: 108 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+ +T+N+ ++A N+ A + EL P +Y L +K E+
Sbjct: 860 RGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQ 919
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM C N V Y+ L++ + G D ++KKM+ + + YT ++
Sbjct: 920 AMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVE 979
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L G ++A ++E + D N ++ +L+ A S ++ + +GI P
Sbjct: 980 CLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISP 1039
Query: 288 CYTTWELL 295
T+ L
Sbjct: 1040 DLYTYNAL 1047
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 1/231 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y ++ +G +D+ ML + K P++ TYN + + A + ++
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENME 437
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P SY Y K P KA T + M+KR + A ++ L G
Sbjct: 438 SLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRIS 497
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E I+ + + Y ++ K G+ +KA + E S D + N L+
Sbjct: 498 EAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
+++ A + RL + P T+ +L G K+G++ K LE F
Sbjct: 558 NTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF 608
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 7/263 (2%)
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K I P SY+ L + EKA ++M+ N Y+ LL +
Sbjct: 788 KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRI 847
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
+++ ++ +M S + N + +IS+LVK KA ++Y E S + P L
Sbjct: 848 NKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPL 907
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG-SV 319
+ + + E A + ++ G P + +L G+ K G+++ E FKK + +
Sbjct: 908 IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967
Query: 320 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM-- 376
R PD + T L G ID A L+ G T YN ++ K+ ++
Sbjct: 968 R---PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDE 1024
Query: 377 PLIIVERMQKDNVQMDAETQKVL 399
L + M+ + D T L
Sbjct: 1025 ALSLFSEMKNRGISPDLYTYNAL 1047
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 118/292 (40%), Gaps = 7/292 (2%)
Query: 13 AQSYRQRVAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMS 72
A +R+ + L + R E P+ + SAL+ S NK A L ++
Sbjct: 840 AHGKSKRINKLYDLYSEMRSRGCE--PNAITHNIIISALVKSNNLNK----ALDLYYELM 893
Query: 73 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKE 131
F P Y +++ + G+ ++ ++ +E L P+ V YN+ + + +
Sbjct: 894 SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEID 953
Query: 132 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 191
A + F ++ K I PD SY+ L ++A +E++ + V+Y+ ++
Sbjct: 954 FACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFII 1013
Query: 192 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 251
+ DE L ++ +M + + Y +I L G+ + A +Y+E + +
Sbjct: 1014 NGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLE 1073
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 303
N L+ + + A S + +++ G P T+ L Y + G
Sbjct: 1074 PSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 16/264 (6%)
Query: 55 YVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPD 113
Y ++ A+A E M + G + N L G++ + + +L K SPD
Sbjct: 455 YGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPD 514
Query: 114 VVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLK 173
VTYN+ + + + A + E+ +PD + ++L + K + A
Sbjct: 515 SVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFG 574
Query: 174 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM-------NDAEYTCVI 226
++ V Y+ LL T +G + ++L K + LF M N + ++
Sbjct: 575 RLKNLKLAPTVVTYNILL---TGLGKEGKIL----KALELFGSMTESGCPPNTITFNSLL 627
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
L K + A ++ ++ D N ++ I +++ A F++++ K +
Sbjct: 628 DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLS 686
Query: 287 PCYTTWELLTWGYLKKGQMEKVLE 310
P Y T L G ++ G++E ++
Sbjct: 687 PDYVTLCTLIPGVVRHGRVEDAIK 710
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 10/268 (3%)
Query: 51 LLHSYVQNKKSAEA-EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KK 108
+L S + +A A E +M+ G + YN ++N + L ++ +EL ++
Sbjct: 7 VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
PDVVTYN + + D E A + ++ P+ ++YS L + K+ ++A
Sbjct: 67 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126
Query: 169 ATTLKEMEKRTCR--KNRVAYSSLLSLYTNMGYKDEVLRIWKKMM--SLFAKMNDAEYTC 224
++EM +++C N + Y+S L E + + + SL + ++
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVT 282
+I L K G+ ++A +++D+ I+G P V N L+ +++E A + +V
Sbjct: 187 LIDGLCKCGQIDEACSVFDDM--IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLE 310
KG+ P T+ +L + K ++++ LE
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALE 272
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 147/360 (40%), Gaps = 15/360 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMS--ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
S L++ + + EA L+++M+ C L + YN L+ + ++++ L
Sbjct: 111 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 170
Query: 107 KKNT---SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 163
+ + SPD VT++ + + A F ++ P+ I+Y+ L + K +
Sbjct: 171 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 230
Query: 164 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN----- 218
E+A ++ M + + + YS L+ + DE L + M S N
Sbjct: 231 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPD 290
Query: 219 DAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYN 278
+ +I+ K G FE+A +++E + + D L+ Q+E A +
Sbjct: 291 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD 350
Query: 279 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEE 338
+ G+ P T+ L G K G++E+ + ++ + S VPD + L
Sbjct: 351 LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS--GCVPDSITYGSLVYALCR 408
Query: 339 QGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAET 395
D A L+ L++ G T YN L+ K+GK + ++E M Q D+ T
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 125/307 (40%), Gaps = 8/307 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+AL++ + K A A++E M + G + Y+ +++ + ++D+ ++L +
Sbjct: 220 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 279
Query: 109 NTS------PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
PD VT+N+ +A + E A F E+ + PD +++ L K
Sbjct: 280 RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 339
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
E A L M N V Y++L+ G +E + ++M+S + Y
Sbjct: 340 GQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITY 399
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVT 282
++ +L + + A + E +S D NIL+ + E A + +V
Sbjct: 400 GSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVG 459
Query: 283 KGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDI 342
KG +P T+ G + G + +E + + + +PD ++ + + G +
Sbjct: 460 KGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLA--KGMLPDATTCSSILDWVCRSGKL 517
Query: 343 DGAEHLL 349
D + ++
Sbjct: 518 DDVKAMI 524
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 13/260 (5%)
Query: 38 LPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP----YNHMLNLYISN 93
+PD++ T ++LL A+ L+ +M +C +P YN L+
Sbjct: 316 MPDRL----TYNSLLSVCASKGMWEMAQKLLSEMDH----RCIVPDVFTYNTYLDTLCKA 367
Query: 94 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 152
GQ+D ++ +E+ K P+VVTY+ + A N E A + E+K + D +SY
Sbjct: 368 GQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSY 427
Query: 153 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 212
+TL +Y K+ ++A KEME+ ++ V Y++LLS Y G DEV R++++M +
Sbjct: 428 NTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKA 487
Query: 213 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 272
N Y+ +I K F++A ++Y E++ D + ++ +E
Sbjct: 488 RNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMES 547
Query: 273 AESFYNRLVTKGIKPCYTTW 292
+ ++ KGIKP T+
Sbjct: 548 SIMLLMAMMEKGIKPNVVTF 567
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 4/269 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL--DKVPQMLQEL 106
SA++ ++ +N + +A L MS G + + YN +++ + G++ D V + E+
Sbjct: 252 SAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAG-AKGEVSFDVVVKFYDEM 310
Query: 107 KKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
N PD +TYN L+ CAS+ E A+K E+ I PD +Y+T K
Sbjct: 311 IANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQI 370
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+ A +EM + N V YS+++ Y ++ L ++++M ++ Y +
Sbjct: 371 DLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTL 430
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ KLG ++A E E D N LL+ Y + + + + I
Sbjct: 431 VGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNI 490
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKK 314
P T+ + Y K ++ ++ +++
Sbjct: 491 YPNTLTYSTMIDMYTKGEMFQEAMDVYRE 519
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 24 QALQTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 81
+A Q FE + K P+ T SA++ Y + +A L E+M +
Sbjct: 366 KAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRV 425
Query: 82 PYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN ++ +Y G LD+ + +E++++ + DVVTYN L+ + + F E+
Sbjct: 426 SYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM 485
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K I P+ ++YST+ +Y K E+ ++A +E + + V YS+++ G
Sbjct: 486 KARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLM 545
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISS 228
+ + + MM K N + +I +
Sbjct: 546 ESSIMLLMAMMEKGIKPNVVTFNSIIDA 573
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 162/391 (41%), Gaps = 43/391 (10%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+AL+ Y + + A A A++E+M+ G + YN ++ + +G D ++++ +K
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ P+VVTY + + A + + ++ + PD ++ S L + +
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A +EM+K N V Y +L+ E L + +M+S M+ YT ++
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370
Query: 228 SLVKLGEFEKAENIYDEWESI------------------SGTGDPR------------VP 257
L K G+ E+A+++ +S +G D +P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430
Query: 258 NI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 312
N+ ++ + R L A + ++ GI P T+ L G+ K E L+ +
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490
Query: 313 KKAIGSVRKWV-PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
+ + + V ++ ++ + N L + G+I+GAE L + G + + Y +L+
Sbjct: 491 RDML---HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGL 547
Query: 371 AKAGKMP--LIIVERMQKDNVQMDAETQKVL 399
K G MP + + + + N+ DA V
Sbjct: 548 FKTGNMPAAFKVGQELMEKNLSPDAVVYNVF 578
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 18/303 (5%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTS--PDVVTYNLWLAACASQNDKETAEKAFLEL 140
YN +N + G+ + L+E++ NT PD TYN +AA + A K E+
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMR-NTGLEPDQATYNTMIAARCREGKTSKALKLLKEM 633
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K+ I P+ I+Y+TL ++ + +KA L EM + + +L +
Sbjct: 634 KRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRP 693
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 260
D +L I + MM + Y ++ L G A + DE + D N L
Sbjct: 694 DVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNAL 753
Query: 261 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM---EKVLECFKKAIG 317
+ + + L+ A + Y +++ +G+ P T+ L G G++ + VL KK +G
Sbjct: 754 ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKK-VG 812
Query: 318 SVRKWVPDHRLITA---AYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKA 373
+ L+T NK+E A L + + G + YNSL+ +AKA
Sbjct: 813 LEPNNLTYDILVTGYAKKSNKVE-------ALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865
Query: 374 GKM 376
G M
Sbjct: 866 GMM 868
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 125/301 (41%), Gaps = 3/301 (0%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
Y +++ + G +D Q+L +++ K+ P+VVT++ + + A ++K
Sbjct: 400 YTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMK 459
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ I P+ ++Y TL + K + E A ++M N SL++ G +
Sbjct: 460 DSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIE 519
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++K M ++ YT ++ L K G A + E + + D V N+ +
Sbjct: 520 GAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFI 579
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ A+SF + G++P T+ + ++G+ K L+ K+ + K
Sbjct: 580 NCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIK 639
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIV 381
P+ T L E G + A+ LL + +AG T + + + + P +I+
Sbjct: 640 --PNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVIL 697
Query: 382 E 382
E
Sbjct: 698 E 698
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 111/291 (38%), Gaps = 36/291 (12%)
Query: 60 KSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYN 118
K +EA++ +++M G YN M+ G+ K ++L+E+K+N+ P+++TY
Sbjct: 587 KFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYT 646
Query: 119 LW-----------------------------------LAACASQNDKETAEKAFLELKKT 143
L AC+ + + +
Sbjct: 647 TLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGA 706
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
+ D Y+TL + + A L EM R + + +++L+ + + D
Sbjct: 707 GLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNA 766
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
I+ +M+ N A + ++ L G +A+ + + + + + +IL+
Sbjct: 767 FAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTG 826
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 314
Y ++ A Y +V+KG P +T+ L + K G M + E F +
Sbjct: 827 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSE 877
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 122/303 (40%), Gaps = 23/303 (7%)
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ D V+YN++LAA + Q A E+ K + D ++ ST + L +AA
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170
Query: 170 TTLKEMEKRTCRKNR---VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
L EM R + V +++L+ Y + L + ++M + ++ Y ++
Sbjct: 171 -ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLV 229
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLV 281
+ G+ + A + + ++ D PN+ L+ Y ++ A S Y +V
Sbjct: 230 AGFFHSGDADAALEVVERMKA-----DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMV 284
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA--IGSVRKWVPDHRLITAAYNKLEEQ 339
G+ P T L G + GQ + F++ IG P+H + L +
Sbjct: 285 RSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIG----VAPNHVTYCTLIDSLAKA 340
Query: 340 GDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQ 396
+ LL + + G V +Y +L+ K GK+ ++ Q DN+ + T
Sbjct: 341 RRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY 400
Query: 397 KVL 399
VL
Sbjct: 401 TVL 403
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/282 (17%), Positives = 110/282 (39%), Gaps = 3/282 (1%)
Query: 94 GQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 153
G+ + +ML + DVV +N + D A + + D + Y+
Sbjct: 167 GEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYN 226
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
+L + + + A ++ M+ N V Y++L+ Y DE +++ M+
Sbjct: 227 SLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS 286
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 273
+ + ++ L + G+F +A ++ E + I + L+ + + +
Sbjct: 287 GVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSES 346
Query: 274 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 333
+V++G+ + L K+G++E+ + + A P+ T
Sbjct: 347 LGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHA--QSDNITPNFVTYTVLV 404
Query: 334 NKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+ G+IDGAE +L+ + + + ++S++ K G
Sbjct: 405 DAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRG 446
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM-LQELKKN 109
L+H + + A ++++M G + +N ++ + + LD + Q L +
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG 777
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
SP++ T+N L S A+ ++KK ++P+ ++Y L + Y K +A
Sbjct: 778 LSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEAL 837
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 210
EM + Y+SL+S + G ++ ++ +M
Sbjct: 838 RLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM 878
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 112/297 (37%), Gaps = 15/297 (5%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-----NTSPDVVTY 117
+A+ L+ +M+ GF P H L +G + P ++ E+ + D+ Y
Sbjct: 660 KAKFLLNEMASAGF--APTSLTHQRVLQACSGS--RRPDVILEIHELMMGAGLHADITVY 715
Query: 118 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 177
N + A E+ I PD I+++ L + K + A +M
Sbjct: 716 NTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLH 775
Query: 178 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 237
+ N +++LL + G E + M + + N+ Y +++ K +
Sbjct: 776 QGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVE 835
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL-- 295
A +Y E S N L++ + + A+ ++ + +G+ +T+++L
Sbjct: 836 ALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLN 895
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTL 352
W L+ G ++L K +G + P I++ G A LL TL
Sbjct: 896 GWSKLRNGIEVRILLKDMKELG----FKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 156/368 (42%), Gaps = 42/368 (11%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L+ SY + K A+ + ++ G P YN++LN+ + +D+ + +E L+
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY 209
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PDV ++N+ + + + A + F + PD +SY+TL + + ++ K
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269
Query: 170 TTLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
LKE M + + + Y+S++S Y +G ++ +M+S K ND + +I
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K+G A +Y+ +++ G P
Sbjct: 330 FGKVGNMRSAMVMYE-----------------------------------KMLLLGCLPD 354
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L GY ++G++ + L+ +++ VR P+ N L ++ I A +
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEM--KVRNLSPNVYTYAVLINALCKENRIREARNF 412
Query: 349 LVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVLKITSEM 405
L L+++ V IYN ++ + KAGK+ IV MQ+ + D T +L I + M
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM 472
Query: 406 PVSEVSSI 413
V +I
Sbjct: 473 KGRMVEAI 480
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 4/280 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE--LKKNTSPDVVTYNLW 120
+A + M G + YN ++N + ++ K +L+E L K SPDV+TY
Sbjct: 232 KAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
++ D + A + F E+ + I P+ +++ L + K+ A ++M C
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC 351
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ V ++SL+ Y G ++ L++W++M N Y +I++L K +A N
Sbjct: 352 LPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+S P + N ++ + +++ A + K +P T+ +L G
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNC 471
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
KG+M + + F K I VPD I + + L + G
Sbjct: 472 MKGRMVEAISTFYKMIEI--NCVPDEITINSLISCLLKAG 509
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 119/288 (41%), Gaps = 6/288 (2%)
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY+L + ++A+ F ++ I PD L S Y +M + A L E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + Y++LL++ DE + ++++ + + + + +I L ++GE
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR-LVTKGIKPCYTTWEL 294
+KA + + D N L+ + N++ ++ KG+ P T+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN 354
+ GY K G M+ E F + + S K P+ + + G++ A + +
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIK--PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 355 AGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
G + + + SL+ Y + G++ L + E M+ N+ + T VL
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVL 396
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 30 ARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
A E F E + ++ D T + L+ + + A + EKM G L + + +++
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363
Query: 89 LYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y G++++ ++ +E+K +N SP+V TY + + A +N A LK +++ P
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVP 423
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
Y+ + + K ++A + EM+++ CR +++ ++ L+ G E + +
Sbjct: 424 KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
KM+ + ++ +IS L+K G +A I
Sbjct: 484 YKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 10/135 (7%)
Query: 20 VAQAQALQTRARENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 79
+++A+ L+ E +F ++ + R ALLH YV+NK +AEA+M+KM E GF+K
Sbjct: 114 ISKARGLEQA--EEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKT 171
Query: 80 PLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFL 138
PL YN MLNLY G+ +K+ ++++E+++ + TYN+ + A A+ +D EK
Sbjct: 172 PLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNMEKL-- 229
Query: 139 ELKKTKIDP----DW 149
L K + DP DW
Sbjct: 230 -LSKMEADPLVATDW 243
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 139/370 (37%), Gaps = 49/370 (13%)
Query: 48 CSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
C LL + + ++ E GF YN ++N + G + + E++
Sbjct: 191 CGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR 250
Query: 108 K-NTSPDVVTYNLWL-AACASQNDKETAEKAFLELKKT----KIDPDWISYSTLTSLYIK 161
K P V++N + C S+N E LKKT +I PD +YS L K
Sbjct: 251 KRGLRPTTVSFNTLINGLCKSRNLDEG-----FRLKKTMEENRIYPDVFTYSVLIHGLCK 305
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ A EM++R R N + +++L+ D + + +M+++ K +
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVM 365
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM--------- 272
Y +++ L K+G+ KA + DE + D L+ Y LE
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425
Query: 273 --------------------------AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
AE +V G+KP T+ ++ GY KKG ++
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVK 485
Query: 307 KVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNS 365
+ K+ + P N L +QG + A LL + N G +I YN
Sbjct: 486 MGFKLLKEM--QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543
Query: 366 LLRTYAKAGK 375
LL + K GK
Sbjct: 544 LLEGHCKNGK 553
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 134/336 (39%), Gaps = 11/336 (3%)
Query: 45 PDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
P T S L++ +++ E L + M E Y+ +++ G+LD Q+
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315
Query: 103 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
E++ + P+ +T+ + ++A + ++ + PD + Y+TL + K
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
+ KA + EM + +++ Y++L+ Y G + + I K M +++
Sbjct: 376 VGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+T +IS + G AE E D +++ Y + ++M +
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
G KP T+ +L G K+GQM+ + + PD YN L E
Sbjct: 496 INGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN--LGVTPDD----ITYNILLEGHC 549
Query: 342 IDGAEHLLVTLRNAGH--VSTEIYNSLLRTYAKAGK 375
+G L+ LRN V Y SL+ Y K+ K
Sbjct: 550 KNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLK 585
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 121/295 (41%), Gaps = 44/295 (14%)
Query: 24 QALQTRARENFFENLPDKM--RG--PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 77
L R + E L D+M RG P+ T +AL+ ++++ A +M G
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360
Query: 78 KCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKA 136
+ YN +LN G ++K +++ E++ PD +TY + + D E+A
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA--- 417
Query: 137 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 196
+E++K M + + VA+++L+S +
Sbjct: 418 -MEIRKG-------------------------------MNEEGVVLDNVAFTALISGFCR 445
Query: 197 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
G + R ++M+ K +DA YT VI K G + + E + I+G +
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ-INGHKPGVI 504
Query: 257 P-NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 310
N+L+ + Q++ A ++ G+ P T+ +L G+ K G+ E +L+
Sbjct: 505 TYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLK 559
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 156/368 (42%), Gaps = 42/368 (11%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L+ SY + K A+ + ++ G P YN++LN+ + +D+ + +E L+
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY 209
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
PDV ++N+ + + + A + F + PD +SY+TL + + ++ K
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269
Query: 170 TTLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
LKE M + + + Y+S++S Y +G ++ +M+S K ND + +I
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
K+G A +Y+ +++ G P
Sbjct: 330 FGKVGNMRSAMVMYE-----------------------------------KMLLLGCLPD 354
Query: 289 YTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 348
T+ L GY ++G++ + L+ +++ VR P+ N L ++ I A +
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEM--KVRNLSPNVYTYAVLINALCKENRIREARNF 412
Query: 349 LVTLRNAGHVSTE-IYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVLKITSEM 405
L L+++ V IYN ++ + KAGK+ IV MQ+ + D T +L I + M
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM 472
Query: 406 PVSEVSSI 413
V +I
Sbjct: 473 KGRMVEAI 480
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 4/280 (1%)
Query: 63 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE--LKKNTSPDVVTYNLW 120
+A + M G + YN ++N + ++ K +L+E L K SPDV+TY
Sbjct: 232 KAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291
Query: 121 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 180
++ D + A + F E+ + I P+ +++ L + K+ A ++M C
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC 351
Query: 181 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 240
+ V ++SL+ Y G ++ L++W++M N Y +I++L K +A N
Sbjct: 352 LPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411
Query: 241 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 300
+S P + N ++ + +++ A + K +P T+ +L G
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNC 471
Query: 301 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQG 340
KG+M + + F K I VPD I + + L + G
Sbjct: 472 MKGRMVEAISTFYKMIEI--NCVPDEITINSLISCLLKAG 509
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 119/288 (41%), Gaps = 6/288 (2%)
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TY+L + ++A+ F ++ I PD L S Y +M + A L E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + Y++LL++ DE + ++++ + + + + +I L ++GE
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR-LVTKGIKPCYTTWEL 294
+KA + + D N L+ + N++ ++ KG+ P T+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
Query: 295 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN 354
+ GY K G M+ E F + + S K P+ + + G++ A + +
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIK--PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 355 AGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
G + + + SL+ Y + G++ L + E M+ N+ + T VL
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVL 396
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 30 ARENFFENLPDKMRGPD-TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 88
A E F E + ++ D T + L+ + + A + EKM G L + + +++
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363
Query: 89 LYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP 147
Y G++++ ++ +E+K +N SP+V TY + + A +N A LK +++ P
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVP 423
Query: 148 DWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIW 207
Y+ + + K ++A + EM+++ CR +++ ++ L+ G E + +
Sbjct: 424 KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483
Query: 208 KKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 241
KM+ + ++ +IS L+K G +A I
Sbjct: 484 YKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 3/260 (1%)
Query: 116 TYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 175
TYN+ L + E +EK E+ I PD ++STL + + PE+A + M
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ + V Y+S++ +Y +G +E + +++K+ S+ K++ Y + + + G++
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDY 264
Query: 236 EKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ + E + + + N L+ ++ A+ +N + T G+ P T +L
Sbjct: 265 QSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSIL 324
Query: 296 TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
Y + G ++ E ++ W D + + E G ++ AE +L ++ A
Sbjct: 325 VEMYTRVGAYDQAFEVYETL--KTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRA 382
Query: 356 GHVSTEI-YNSLLRTYAKAG 374
G + Y + + TYA G
Sbjct: 383 GCNPDHLTYRTAMNTYATKG 402
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 39/268 (14%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
+FE + + PD T ++++ Y + + EA L EK+ + + Y + N+Y
Sbjct: 200 WFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYA 259
Query: 92 SNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 150
G + Q++QE++ + +SP+ V N + + A+K F E++ + + P +
Sbjct: 260 RAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPV 319
Query: 151 SYSTLTSLYIKMEL-----------------------------------PEKAATTLKEM 175
+ S L +Y ++ E+A LKEM
Sbjct: 320 TLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEM 379
Query: 176 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
++ C + + Y + ++ Y G D R++ K+++L K + +T +I + GE
Sbjct: 380 KRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEI 439
Query: 236 EKAENIYDE-WESISGTGDPRVPNILLA 262
E+A I+DE ES + D RV +LL+
Sbjct: 440 EQASKIFDEMMESGCCSPDERVSGMLLS 467
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 134/300 (44%), Gaps = 12/300 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ML + + QL+ ++++E+ + PD T++ + E A K F +K
Sbjct: 146 YNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMK 205
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
I PD ++Y+++ +Y ++ +A ++++ + + V Y ++ ++Y G
Sbjct: 206 SEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQ 265
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
++++ ++M + N ++ +L K G+ +A+ +++E + + P +IL+
Sbjct: 266 SIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILV 325
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKKAIGS 318
Y + A Y L T+G K + L ++ G Q E +L+ K+A +
Sbjct: 326 EMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCN 385
Query: 319 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLL--VTLRNAGHVSTEIYNSLLRTYAKAGKM 376
PDH A N +G +D A + V N G T ++ ++R AG++
Sbjct: 386 -----PDHLTYRTAMNTYATKGMVDPARRMFDKVVALN-GKPDTPLFTVMIRACKLAGEI 439
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 131/305 (42%), Gaps = 4/305 (1%)
Query: 27 QTRARENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYN 84
Q E E + + PD T S L++ + ++ EA E+M G + + YN
Sbjct: 158 QLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYN 217
Query: 85 HMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 143
++++Y G++++ ++ ++LK N D VTY A D ++ + E++ +
Sbjct: 218 SVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDS 277
Query: 144 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 203
P+ + +TL K +A EM V S L+ +YT +G D+
Sbjct: 278 GSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQA 337
Query: 204 LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAA 263
+++ + + K + A Y ++ + V+ G E+AE+I E + D +
Sbjct: 338 FEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNT 397
Query: 264 YINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWV 323
Y + ++ A ++++V KP + ++ G++E+ + F + + S
Sbjct: 398 YATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMES-GCCS 456
Query: 324 PDHRL 328
PD R+
Sbjct: 457 PDERV 461
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 11/246 (4%)
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
++++ P+ +Y+ L + + +K EME+ C N V Y++L+ Y MG D
Sbjct: 3 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
E + K M S + N Y +I+ L + G ++A I +E T D N LL
Sbjct: 63 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
Y A + +V G+ P T+ L K + + +E F + +R
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM--RIRG 180
Query: 322 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLII 380
P+ R T + QG ++ A +L + +G + + YN+ + + +
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC--------V 232
Query: 381 VERMQK 386
+ERM++
Sbjct: 233 LERMEE 238
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 134/322 (41%), Gaps = 3/322 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ +Y + + EA L++ MS G + YN ++N G + + ++L+E+
Sbjct: 47 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 106
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K +PD VTYN L + + A E+ + + P ++Y+ L + K
Sbjct: 107 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 166
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
+A +M R R N Y++L+ ++ G +E RI +M + Y
Sbjct: 167 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
I L E+A + E D + +++ + + +L+ A +V KG+
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 345
P T+ L G + ++ + + ++ + PD T N +GD++ A
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD--MGLPPDEFTYTTLINAYCVEGDLNKA 344
Query: 346 EHLLVTLRNAGHVSTEIYNSLL 367
HL + + G + + S+L
Sbjct: 345 LHLHDEMIHKGFLPDAVTYSVL 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 138/321 (42%), Gaps = 4/321 (1%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ +++ + EA ++E+M GF + YN +LN Y G + + E+ +
Sbjct: 84 NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 143
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N SP VVTY + + + A + F +++ + P+ +Y+TL + + L +
Sbjct: 144 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 203
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L EM + + V Y++ + + + +E L + ++M+ + Y+ +IS
Sbjct: 204 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 263
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
+ GE ++A + E + D + L+ +L A ++ G+ P
Sbjct: 264 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 323
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
T+ L Y +G + K L + I + ++PD + N L +Q A+
Sbjct: 324 DEFTYTTLINAYCVEGDLNKALHLHDEMIH--KGFLPDAVTYSVLINGLNKQARTREAKR 381
Query: 348 LLVTLRNAGHVSTEI-YNSLL 367
LL L V +++ Y++L+
Sbjct: 382 LLFKLIYEESVPSDVTYDTLI 402
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 13/269 (4%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELK 141
YN ++ + S G+L K E+++N P+VVTYN + A + A +
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 201
+ P+ ISY+ + + + ++A L+EM + + V Y++LL+ Y G
Sbjct: 73 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 132
Query: 202 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 261
+ L I +M+ + YT +I+S+ K +A +D+ + R L+
Sbjct: 133 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 192
Query: 262 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 321
+ + L A N + G P T+ G+ VLE ++A+G V++
Sbjct: 193 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC-------VLERMEEALGVVQE 245
Query: 322 WV-----PDHRLITAAYNKLEEQGDIDGA 345
V PD + + +G++D A
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRA 274
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 106 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ SP+V TYN+ + S + + F E+++ P+ ++Y+TL Y KM
Sbjct: 2 IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 61
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A LK M + + N ++Y+ +++ G E I ++M ++ Y +
Sbjct: 62 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN-----RNQLEMAESFYNRL 280
++ K G F +A I+ E + P V + A IN RN L A F++++
Sbjct: 122 LNGYCKEGNFHQALVIHAEM--VRNGVSPSV--VTYTALINSMCKARN-LNRAMEFFDQM 176
Query: 281 VTKGIKPCYTTWELLTWGYLKKG 303
+G++P T+ L G+ ++G
Sbjct: 177 RIRGLRPNERTYTTLIDGFSRQG 199
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +A +H + ++ EA ++++M E G + Y+ +++ + G+LD+ QM QE+
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 281
Query: 107 -KKNTSPDVVTYNLWLA----------AC-------------------------ASQNDK 130
+K SPD VTY+ + AC + D
Sbjct: 282 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 341
Query: 131 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 190
A E+ PD ++YS L + K +A L ++ + V Y +L
Sbjct: 342 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 401
Query: 191 LSLYTNMGYKD---------------EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEF 235
+ +N+ +K E R+++ M+ K +A Y +I + G
Sbjct: 402 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNL 461
Query: 236 EKAENIYDE 244
KA N+Y E
Sbjct: 462 PKAFNLYKE 470
>gi|255581580|ref|XP_002531595.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528791|gb|EEF30798.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 176
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 238 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 297
E I++EWES D R+PNIL++ Y+ + +E AE+F NR +++G KP TW L
Sbjct: 19 GEKIFEEWESRKLKYDIRIPNILISTYLRKGLMEKAETFVNRAISEGRKPDAITWYYLAT 78
Query: 298 GYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA-YNKLEEQGDIDGAEHLLVTLRNAG 356
GYL+ Q EK +E KKA+ + A+ L+ +GD++ AE L+ L +
Sbjct: 79 GYLQNNQTEKAVEMMKKALEVSGSKLKSSSESLASCLEYLKGKGDLEKAEELIKLLLDND 138
Query: 357 HVSTEIYNSLL 367
+S +I LL
Sbjct: 139 IISLDIQEKLL 149
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 144/318 (45%), Gaps = 21/318 (6%)
Query: 17 RQRVAQAQALQTRARENFFENL-PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECG 75
R+ V QAQ FF+ + + M T S L+ + S+EA L E+M E G
Sbjct: 198 RKHVKQAQ--------EFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERG 249
Query: 76 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAE 134
+ YN +L G +D+ ++ +E+ N +PD +Y++++ A ND +A
Sbjct: 250 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAF 309
Query: 135 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLY 194
+ +++ + P+ +Y+ + K E ++A L EM +R + +Y+++ + +
Sbjct: 310 QVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFH 369
Query: 195 TNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 254
+ ++ LR+ +M + Y V+ L+++G F++ +++ E
Sbjct: 370 CDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAA 429
Query: 255 RVPNILLAAYI-NRNQLEMAESFYNRLVTKGIKPCYTTWELL-----TWGYLKK-----G 303
+++ + + +LE A ++ ++ GI P T ELL G+ ++ G
Sbjct: 430 STYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAG 489
Query: 304 QMEKVLECFKKAIGSVRK 321
+ME+ C + + SV +
Sbjct: 490 KMERSTSCVIQELSSVMR 507
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/266 (16%), Positives = 102/266 (38%)
Query: 45 PDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQ 104
P+ + +Y + +A +M + G + +L + + + +
Sbjct: 150 PEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFD 209
Query: 105 ELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 164
++ P+ TY++ + D A K F E+++ D ++Y++L K
Sbjct: 210 KVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGN 269
Query: 165 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 224
++A +EM + +YS + Y + ++ +M N Y C
Sbjct: 270 VDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNC 329
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
++ L K + ++A + DE + D N + A + + ++ A +R+ +
Sbjct: 330 IVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKEN 389
Query: 285 IKPCYTTWELLTWGYLKKGQMEKVLE 310
P T+ ++ L+ G+ ++V +
Sbjct: 390 CMPDRHTYNMVLKMLLRVGRFDRVTD 415
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 144/332 (43%), Gaps = 6/332 (1%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T +AL++ + + +M+ M E GF YN +++ G++D+ ++
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L + ++ P+ VTYN + +N E A + L + PD ++++L
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
E A +EM+++ C + YS L+ + E L + K+M N
Sbjct: 420 TSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVV 479
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y +I L K AE+I+D+ E + + N L+ ++E A ++++
Sbjct: 480 YNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMI 539
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
+G+KP T+ + + ++G +++ + + ++ PD L + G
Sbjct: 540 MEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM--TLNGCEPDIVTYGTLIGGLCKAGR 597
Query: 342 IDGAEHLLVTLRNAGHVST-EIYNSLLRTYAK 372
+D A LL +++ G V T + YN +++ K
Sbjct: 598 VDVASKLLRSVQMKGMVLTPQAYNPVIQALCK 629
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 22/276 (7%)
Query: 102 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
+L E PD YN+ L+ N + E ++ + PD +++ L K
Sbjct: 152 LLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCK 211
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
A L++M R + +++L+ + + LRI + M+ ++
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
+++ L K G E+A E E D N L+ ++ + ++
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYEEEGFC--PDQVTFNALVNGLCRTGHIKQGLEMMDFML 329
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
KG + T+ L G K G++++ +E + R P+ T YN
Sbjct: 330 EKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVS--RDCEPN----TVTYNT------ 377
Query: 342 IDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMP 377
L+ TL HV E L R G +P
Sbjct: 378 ------LIGTLCKENHV--EAATELARVLTSKGVLP 405
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 149/333 (44%), Gaps = 15/333 (4%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
L+ + + A L+ KM+E G+ + YN++++ S +LD Q+ +E+++
Sbjct: 153 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEE 212
Query: 109 NTS--PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
+ S PDV TY+ + + + A + + P+ ++YS+L K +
Sbjct: 213 SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLD 272
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
+A L+ M + C N V Y++++ + +G DE + ++M+ + N YT ++
Sbjct: 273 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 332
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLV 281
+ K G KAE+ E + G VPN+ LL + ++++E A + ++
Sbjct: 333 DAFCKCG---KAEDAIGLVEVMVEKG--YVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 387
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 341
KG P ++ + G K ++ + + ++ + + VPD + + +
Sbjct: 388 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN--NCVPDIVTFNTIIDAMCKTYR 445
Query: 342 IDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 373
+D A L ++ +G + YNSL+ K+
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 478
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 154/334 (46%), Gaps = 9/334 (2%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + +++ ++ + +A L+E+M + GF YN +L+ + +++ +
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 103 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 161
L+++ + PDVV+Y + + + A + ++ + P+ I+Y TL + +
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA- 220
+ + A +++M +R R N + Y++++ + D L+++K+M + D
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221
Query: 221 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 280
Y+ ++ SLVK G+ + A + + S + + + LL +L+ A + R+
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Query: 281 VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWVPDHRLITAAYNKLEEQ 339
G P T+ + G+ K G++++ ++ + G + V + ++ A+ K +
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341
Query: 340 GDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
D G ++V G+V YNSLL + K
Sbjct: 342 EDAIGLVEVMV---EKGYVPNLFTYNSLLDMFCK 372
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 131/321 (40%), Gaps = 43/321 (13%)
Query: 94 GQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL------------- 140
GQ +E+ K PD VTYN + + + + A + E+
Sbjct: 24 GQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYN 83
Query: 141 -------KKTKID---------------PDWISYSTLTSLYIKMELPEKAATTLKEMEKR 178
K +++ PD +SY+T+ + K++ ++A + +M +R
Sbjct: 84 TVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 143
Query: 179 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 238
C+ N + Y +L+ + +G D + + +KM + N Y ++ L + + A
Sbjct: 144 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSA 203
Query: 239 ENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
++ E E SG+ P V + ++ + + +++ A +V+KG P T+ L
Sbjct: 204 LQLFKEMEE-SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262
Query: 297 WGYLKKGQMEKVLECFKKAIGS-VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 355
G K G++++ ++ S + + I + KL G ID A HLL + +
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL---GRIDEAYHLLEEMVDG 319
Query: 356 G-HVSTEIYNSLLRTYAKAGK 375
G + Y LL + K GK
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGK 340
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 122/296 (41%), Gaps = 41/296 (13%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNGQLDKVPQMLQEL- 106
++H +K A L ++M E G CP Y+ +++ + +G++D ++++ +
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESG--SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV 247
Query: 107 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K SP+VVTY+ L + A + ++ P+ ++Y+T+ + K+ +
Sbjct: 248 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 307
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRI---------------WKKMM 211
+A L+EM C+ N V Y+ LL + G ++ + + + ++
Sbjct: 308 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367
Query: 212 SLFAKMNDAEYTC--------------------VISSLVKLGEFEKAENIYDEWESISGT 251
+F K ++ E C VI+ L K + + + ++ S +
Sbjct: 368 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 427
Query: 252 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
D N ++ A ++++A +N + G P T+ L G K + ++
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 483
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 2/231 (0%)
Query: 81 LPYNHMLNLYISNGQLDKVPQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 138
+ YN +++ + + D+ +L+E+ K+ SPD++TYN + + A K FL
Sbjct: 466 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 525
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
++ + PD ++YS + S K ++A L+ M K + Y +L+ + G
Sbjct: 526 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 585
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
D+ L I + ++S + + ++ I L K G +A + + D N
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 645
Query: 259 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 309
LL + + ++ E A + + G +P T+ L + K + +L
Sbjct: 646 TLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLL 696
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 154/341 (45%), Gaps = 20/341 (5%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
+C L+ + ++ +SA+ E L ++M +N ++N G+++K +++++
Sbjct: 190 SCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM 249
Query: 107 K-KNTSPDVVTYNLWLAA-CASQNDKET--AEKAFLELKKTKIDPDWISYSTLTSLYIKM 162
K SP+VV+YN + C + + A+ E+ + ++ P+ +++ L + K
Sbjct: 250 KVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKD 309
Query: 163 ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 222
+ + KEM + N + Y+SL++ N G +E + + KM+S + N Y
Sbjct: 310 DNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITY 369
Query: 223 TCVISSLVKLGEFEKAENIYDEWESISGTG---DPRVPNILLAAYINRNQLEMAESFYNR 279
+I+ K G ++A +++D S+ G G R+ N+L+ AY +++ +
Sbjct: 370 HSLINGFCKNGMMKEALDMFD---SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 280 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 339
+ +GI P T+ L G + G +E + F + K +PD +
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL---TNKGLPDLVTFHILMEGYCSR 483
Query: 340 GDIDGAEHLLVTLRNAG----HVSTEIYNSLLRTYAKAGKM 376
G+ A LL + G H++ YN +++ Y K G +
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLT---YNIMMKGYCKEGNL 521
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 103/259 (39%), Gaps = 38/259 (14%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T +L++ + +N EA + + + G YN +++ Y G++D + +E+
Sbjct: 368 TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 107 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
++ PDV TYN +A + E A+K F +L + PD +++ L Y
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGES 486
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM-MSLFAKMNDAEYTC 224
KAA LKEM K + + Y+ ++ Y G + +M +MN A Y
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY-- 544
Query: 225 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 284
N+LL Y + +LE A N ++ KG
Sbjct: 545 ---------------------------------NVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 285 IKPCYTTWELLTWGYLKKG 303
+ P T+E++ + KG
Sbjct: 572 LVPNRITYEIVKEEMVDKG 590
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 145/370 (39%), Gaps = 49/370 (13%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECG--------------------------------- 75
++L+H+Y + + A A E+M G
Sbjct: 56 TSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKA 115
Query: 76 --FLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKET 132
+ + YN ++ Y G ++ V +L ++ ++ ++ Y L A D+E
Sbjct: 116 ENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEK 175
Query: 133 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 192
F LK + P +Y + L+ K KA L+EM+K N++ Y+ ++
Sbjct: 176 CLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMD 235
Query: 193 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 252
Y G ++W+ M+S K + Y ++ + K G +KA + + E+
Sbjct: 236 GYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEA----- 290
Query: 253 DPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 307
+ +P I +L Y+ ++ A ++R+ T G++P ++ L G K QME
Sbjct: 291 NRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMEN 350
Query: 308 VLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSL 366
+ + + VP+ R TA GD++ A + ++ + Y +L
Sbjct: 351 ARLMLNEMLAN--GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGAL 408
Query: 367 LRTYAKAGKM 376
L+ K+G M
Sbjct: 409 LKACCKSGAM 418
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 135/328 (41%), Gaps = 4/328 (1%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKN 109
L+ Y ++ A A E M Y +++ Y ++ +E L +
Sbjct: 23 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 82
Query: 110 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 169
+ + ++ AS + E AE F + K + P I Y+++ Y + E
Sbjct: 83 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 142
Query: 170 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
L +ME+ + N Y+++L+ + + +++ L + ++ + A Y C++
Sbjct: 143 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 202
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G KA +I +E + + + + +++ Y A + +V+ G+KP
Sbjct: 203 TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 262
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ +L + K G+M+K L + + +P T+ + + G+I A +
Sbjct: 263 VIYNILVHAFCKAGRMDKALGVLENI--EANRLLPTIETYTSILDGYVKGGNIQKALEVF 320
Query: 350 VTLRNAGHVSTEI-YNSLLRTYAKAGKM 376
++ AG + YNSLL AKA +M
Sbjct: 321 DRIKTAGLRPGVVSYNSLLSGLAKARQM 348
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 147/357 (41%), Gaps = 10/357 (2%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
+ +L+ + + + + + ++ CG Y ++ L+ G + K +L+E+ K
Sbjct: 161 TTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDK 220
Query: 109 N-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
+ SP+ + Y + + A D A K + ++ + PD + Y+ L + K +K
Sbjct: 221 HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDK 280
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L+ +E Y+S+L Y G + L ++ ++ + + Y ++S
Sbjct: 281 ALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLS 340
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 287
L K + E A + +E + + R L Y +E A + R+ + +
Sbjct: 341 GLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAI 400
Query: 288 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLIT--AAYNKLEEQGDIDGA 345
+ L K G M++ E F++ + K H IT + +G++ A
Sbjct: 401 DIVAYGALLKACCKSGAMQRAAEVFQQITDAGLK----HNRITYCTMLDGWARKGELSKA 456
Query: 346 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 399
LL ++ G H+ T Y S ++ ++G + + M++ ++++A T L
Sbjct: 457 RDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 513
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 120/301 (39%), Gaps = 8/301 (2%)
Query: 98 KVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
K+ Q + K P + Y L + A DK A F ++ + I P+ Y++L
Sbjct: 4 KIVNAFQVIDK---PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIH 60
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
Y + E A +EM + + N + S++S Y + G + ++K +
Sbjct: 61 AYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVP 120
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 277
Y ++ + + G E E + + E G+ + +L + E SF+
Sbjct: 121 GGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFF 180
Query: 278 NRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLE 337
+RL G+ P T+ + + K G M K L+ ++ P+ + +
Sbjct: 181 HRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM--DKHGVSPNKMIYAMIMDGYA 238
Query: 338 EQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAE 394
GD A + + +AG IYN L+ + KAG+M L ++E ++ + + E
Sbjct: 239 RGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIE 298
Query: 395 T 395
T
Sbjct: 299 T 299
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 1/219 (0%)
Query: 49 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 108
++LL + ++ A ++ +M G + Y + Y G ++K M Q +KK
Sbjct: 336 NSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 395
Query: 109 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 167
N + D+V Y L AC + A + F ++ + + I+Y T+ + + K
Sbjct: 396 ENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSK 455
Query: 168 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 227
A L +M+K + + Y+S + G +EV M ++N YT +I
Sbjct: 456 ARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIH 515
Query: 228 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYIN 266
+ + ++A + Y++ ++ D + N LL+ I+
Sbjct: 516 GWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLIS 554
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 7/301 (2%)
Query: 83 YNHMLNLYISNGQLDKVPQMLQELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELK 141
Y+ ++ Y +G+ + +L+ +KK P + YN+ L ++ A +
Sbjct: 1700 YSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMA 1759
Query: 142 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK- 200
T PD +Y+ L + K+ E A ++ M+ R C + V Y++L+ G
Sbjct: 1760 TTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGR 1819
Query: 201 ---DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 257
+ R++++M+ YT VI +L+++ E+A+ + D D
Sbjct: 1820 FRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTY 1879
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
N+L+ + ++ A + + T+G P T+ + G+ K G++E+ + F +
Sbjct: 1880 NMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEM-- 1937
Query: 318 SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMP 377
R P+ R T+ + + G + A LV +R G V Y +L+ T K GK
Sbjct: 1938 KARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTICKLGKGK 1997
Query: 378 L 378
L
Sbjct: 1998 L 1998
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 106/261 (40%), Gaps = 40/261 (15%)
Query: 51 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 110
+L ++ K EA L+ M+ YN ++N G+L+ +++ ++
Sbjct: 1738 ILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARE 1797
Query: 111 SP-DVVTYNLWLAA-CASQNDKETAEKAFL---ELKKTKIDPDWISYSTLTSLYIKMELP 165
P D+VTYN + C N + E+AF E+ P ++Y+ + +++++
Sbjct: 1798 CPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMD 1857
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
E+A L M + C + V Y+ L++ + G D+ + ++ +M + + Y +
Sbjct: 1858 EQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSI 1917
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
+ K G+ E+A ++ E ++ +GI
Sbjct: 1918 VDGFCKAGKVEEANKLFAEMKA-----------------------------------RGI 1942
Query: 286 KPCYTTWELLTWGYLKKGQME 306
P T+ +T LK G+M+
Sbjct: 1943 FPNGRTYTSITDACLKAGRMQ 1963
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 13/246 (5%)
Query: 139 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 198
E K + + +YST+ Y + +A L+ M+K N Y+ +L+ G
Sbjct: 1687 ESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHG 1746
Query: 199 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 258
+ E L + M + + Y +I++L K+G E A+ + + ++ D N
Sbjct: 1747 KEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYN 1806
Query: 259 ILLAAYI----NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK---KGQMEKVLEC 311
L+ R ++E A + +V KG P T+ ++ L+ Q +KVL+
Sbjct: 1807 TLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDL 1866
Query: 312 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTY 370
+ G V + LI N+ + G +D A L V + G + + YNS++ +
Sbjct: 1867 MHEN-GCAFDLVTYNMLI----NRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGF 1921
Query: 371 AKAGKM 376
KAGK+
Sbjct: 1922 CKAGKV 1927
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 114/261 (43%), Gaps = 14/261 (5%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP---LPYNHMLNLYISNG----Q 95
PD T + L+++ + + +A+ L+E M +CP + YN +++ G +
Sbjct: 1765 PDIYTYNILINALCKVGRLEDAQGLVEMMQA---RECPTDIVTYNTLIHGLCRKGNGRFR 1821
Query: 96 LDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 154
+++ ++ +E+ K +P VTY + + A E A+K + + D ++Y+
Sbjct: 1822 VERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNM 1881
Query: 155 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 214
L + + K + +KA EM R C + V Y+S++ + G +E +++ +M +
Sbjct: 1882 LINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARG 1941
Query: 215 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 274
N YT + + +K G + A E G D L++ + ++
Sbjct: 1942 IFPNGRTYTSITDACLKAGRMQDAHAYLVEMRK-EGLVDAISYVALISTICKLGKGKLGF 2000
Query: 275 SFYNRLVTKGIKPCYTTWELL 295
++ KG KP T+ ++
Sbjct: 2001 QLLREMLEKGFKPNLVTFNVV 2021
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 37/195 (18%)
Query: 34 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 91
FE + DK P T + ++ + ++ K +A+ +++ M E G + YN ++N +
Sbjct: 1828 LFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFA 1887
Query: 92 SNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDP--- 147
G +DK + E+ + PDVVTYN + E A K F E+K I P
Sbjct: 1888 KAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGR 1947
Query: 148 -------------------------------DWISYSTLTSLYIKMELPEKAATTLKEME 176
D ISY L S K+ + L+EM
Sbjct: 1948 TYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTICKLGKGKLGFQLLREML 2007
Query: 177 KRTCRKNRVAYSSLL 191
++ + N V ++ +
Sbjct: 2008 EKGFKPNLVTFNVVF 2022
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 163/397 (41%), Gaps = 48/397 (12%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 102
PD T + +H + + EA L+++M GF Y +++ G++D+ +
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344
Query: 103 LQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE-LKKTKIDPDWISYSTLTSLYIK 161
L ++ +P+VV +N + S+ + A+ E + PD +Y+TL K
Sbjct: 345 LNKVP---NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401
Query: 162 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 221
A + EM+ + C N + Y+ L+ + G +E + +M +N
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461
Query: 222 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 281
Y C+IS+L K + + A N++ + S D N L+ N+ E A Y ++
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521
Query: 282 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI---------------------GSVR 320
+G+ T+ L +L++G M++ L+ + G++
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581
Query: 321 KWV------------PDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGH--VSTEI--YN 364
K + P++ N L G+I +H L LR+ H ++ +I YN
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNI---QHALEFLRDMIHRGLTPDIVTYN 638
Query: 365 SLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 399
SL+ K G+ L + +++Q + + DA T L
Sbjct: 639 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 675
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 138/329 (41%), Gaps = 5/329 (1%)
Query: 49 SALLHSYVQNKKSAEAEALM-EKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK 107
+ L++ YV + EA+A+M E M G YN ++ G L +++ E++
Sbjct: 357 NTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQ 416
Query: 108 -KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 166
K P+V+TY + + + E A E+ + + + Y+ L S K E +
Sbjct: 417 IKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQ 476
Query: 167 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 226
A +M + C+ + ++SL+ + +E L +++ M+ N Y +I
Sbjct: 477 DALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 536
Query: 227 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 286
+ ++ G ++A + ++ D N L+ A +E + + +++KG+
Sbjct: 537 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN 596
Query: 287 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 346
P + +L G + G ++ LE + I R PD + N L + G A
Sbjct: 597 PNNISCNILINGLCRTGNIQHALEFLRDMIH--RGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 347 HLLVTLRNAGHVSTEI-YNSLLRTYAKAG 374
+L L+ G I YN+L+ + K G
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEG 683
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 118/296 (39%), Gaps = 36/296 (12%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ + + + EA ++++MS G + YN +++ + ++ M ++
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K PD+ T+N + N E A + ++ + + I+Y+TL +++
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND------ 219
++A + +M R C + + Y+ L+ G ++ L +++ MMS N+
Sbjct: 546 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 605
Query: 220 -----------------------------AEYTCVISSLVKLGEFEKAENIYDEWESISG 250
Y +I+ L K G ++A N++D+ +
Sbjct: 606 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 665
Query: 251 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 306
D N L++ + + A +R V G P TW +L ++K+G E
Sbjct: 666 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 117/304 (38%), Gaps = 47/304 (15%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P +YN+ L + N + F E+ I P ++ + + + A
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV---------------------------- 203
LK+M + C N + Y +L+ +G +EV
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299
Query: 204 -LRIWK------KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 256
LRI + +M+ N Y ++ L ++G+ ++A + ++ +P V
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK------VPNPNV 353
Query: 257 P--NILLAAYINRNQLEMAES-FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 313
N L+ Y++R +L+ A++ + +++ G P T+ L G KKG + E
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413
Query: 314 KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAK 372
+ ++ P+ T ++ ++G ++ A ++L + G + YN L+ K
Sbjct: 414 EM--QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471
Query: 373 AGKM 376
K+
Sbjct: 472 DEKV 475
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 166/390 (42%), Gaps = 57/390 (14%)
Query: 35 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 92
FE + K P+ C+A L+S + + EA+ + + + G + + YN M+ Y
Sbjct: 458 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517
Query: 93 NGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 151
G++D+ ++L E+ +N PDV+ N + + + A K F+ +K+ K+ P ++
Sbjct: 518 VGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 577
Query: 152 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV---LRIWK 208
Y+TL + K ++A + M ++ C N + +++L DEV L++
Sbjct: 578 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK---NDEVTLALKMLF 634
Query: 209 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS----GTGDPRVPNI----- 259
KMM + + Y +I LVK G+ ++A + + + + T +P +
Sbjct: 635 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGL 694
Query: 260 --------------------------LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWE 293
L+ + + ++ A SF RLV GI C
Sbjct: 695 IEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGI--CRDGDS 752
Query: 294 LL------TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 347
+L ++ + + E F K +G V+ +P + L+ L E I+ A+
Sbjct: 753 ILVPIIRYSFKHNNASGARMLFEKFTKDLG-VQPKLPTYNLLIGG---LLEADMIEIAQD 808
Query: 348 LLVTLRNAGHV-STEIYNSLLRTYAKAGKM 376
+ + ++N G + YN LL Y K+GK+
Sbjct: 809 VFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 7/267 (2%)
Query: 112 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 171
P + TYNL + + E A+ FL++K T PD +Y+ L Y K ++
Sbjct: 785 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844
Query: 172 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS--LFAKMNDAEYTCVISSL 229
KEM C N + ++ ++S G D+ L ++ +MS F+ Y +I L
Sbjct: 845 YKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP-TACTYGPLIDGL 903
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K G +A+ +++ + + NIL+ + + + A + + R+V +G++P
Sbjct: 904 SKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 963
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
T+ +L G++++ L F++ S PD N L + ++ A L
Sbjct: 964 KTYSVLVDCLCMVGRVDEGLHYFRELKES--GLNPDVVCYNLIINGLGKFHRLEEALVLF 1021
Query: 350 VTLRNAGHVSTEI--YNSLLRTYAKAG 374
++ + ++ ++ YNSL+ AG
Sbjct: 1022 NEMKKSRGITPDLYTYNSLILNLGIAG 1048
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Query: 47 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 106
T + L+ ++ + +A + + M G Y ++ Y +G + +++
Sbjct: 402 TYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 461
Query: 107 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 165
K K +P++V N L + A A++ F LK + PD ++Y+ + Y K+
Sbjct: 462 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 521
Query: 166 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 225
++A L EM + C + + +SL++ DE +++ +M + K Y +
Sbjct: 522 DEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 581
Query: 226 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 285
++ L K G+ ++A +++ + N L +++ +A +++ G
Sbjct: 582 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 641
Query: 286 KPCYTTWELLTWGYLKKGQMEKVLECF 312
P T+ + +G +K GQ+++ + CF
Sbjct: 642 VPDVFTYNTIIFGLVKNGQVKEAM-CF 667
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 149/381 (39%), Gaps = 42/381 (11%)
Query: 1 MERRRPHGAQVRAQSYRQRV--AQAQALQTRARENFFENLPDKMR-GPDTCSALLHSYVQ 57
+ + R G + A SY + T A E + + D R T S+L+ +
Sbjct: 178 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGK 237
Query: 58 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVT 116
+ L+++M G + + + G++++ ++L+ + + PDVVT
Sbjct: 238 RRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 297
Query: 117 YNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME 176
Y + + A + + A++ F ++K + PD
Sbjct: 298 YTVLIDALCTARKLDCAKEVFAKMKTGRHKPD---------------------------- 329
Query: 177 KRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE 236
RV Y +LL +++ D V + W +M + +T ++ +L K G F
Sbjct: 330 -------RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 382
Query: 237 KAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLT 296
+A D + N L+ + ++L+ A ++ + + G+KP T+ +
Sbjct: 383 EAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFI 442
Query: 297 WGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 356
Y K G LE F+K + P+ A+ L + G A+ + L++ G
Sbjct: 443 DYYGKSGDSVSALETFEKM--KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 500
Query: 357 HVSTEI-YNSLLRTYAKAGKM 376
V + YN +++ Y+K G++
Sbjct: 501 LVPDSVTYNMMMKCYSKVGEI 521
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 12/253 (4%)
Query: 141 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 200
K + P +Y+ L ++ ++ E A +++ C + Y+ LL Y G
Sbjct: 779 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838
Query: 201 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES---ISGTGDPRVP 257
DE+ I+K+M + + N + VIS LVK G + A ++Y + S S T P
Sbjct: 839 DELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898
Query: 258 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 317
L+ +L A+ + + G +P + +L G+ K G+ + FK+ +
Sbjct: 899 --LIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 956
Query: 318 -SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 375
VR PD + + + L G +D H L+ +G + YN ++ K +
Sbjct: 957 EGVR---PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHR 1013
Query: 376 M--PLIIVERMQK 386
+ L++ M+K
Sbjct: 1014 LEEALVLFNEMKK 1026
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 151/380 (39%), Gaps = 45/380 (11%)
Query: 38 LPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 95
+ D+ GPD T + L+ + +K A+ + KM + Y +L+ + N
Sbjct: 286 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRD 345
Query: 96 LDKVPQMLQELKKNTS-PDVVTYNLWL-AACASQNDKETAEKAFLELKKTKIDPDWISYS 153
LD V Q E++K+ PDVVT+ + + A C + N E K + ++ I P+ +Y+
Sbjct: 346 LDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDV-MRDQGILPNLHTYN 404
Query: 154 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 213
TL +++ + A ME + Y + Y G L ++KM +
Sbjct: 405 TLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 464
Query: 214 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL--- 270
N + SL K G +A+ I+ + I D N+++ Y ++
Sbjct: 465 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 524
Query: 271 -----EMAES---------------------------FYNRLVTKGIKPCYTTWELLTWG 298
EM E+ + R+ +KP T+ L G
Sbjct: 525 IKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 584
Query: 299 YLKKGQMEKVLECFKKAIGSVRKWVPDHRL-ITAAYNKLEEQGDIDGAEHLLVTLRNAGH 357
K G++++ +E F+ G V+K P + + ++ L + ++ A +L + + G
Sbjct: 585 LGKNGKIQEAIELFE---GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 641
Query: 358 V-STEIYNSLLRTYAKAGKM 376
V YN+++ K G++
Sbjct: 642 VPDVFTYNTIIFGLVKNGQV 661
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 39/270 (14%)
Query: 30 ARENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHML 87
A + +++ + D+ P C+ L+ ++ + EA+ L E MS+ G YN ++
Sbjct: 876 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILI 935
Query: 88 NLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID 146
N + G+ D + + + K+ PD+ TY++ + + F ELK++ ++
Sbjct: 936 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLN 995
Query: 147 PDWISYSTLTSLYIKMELPEKAATTLKEMEK-RTCRKNRVAYSSLLSLYTNMGYKDEVLR 205
PD + Y+ + + K E+A EM+K R + Y+SL+ N+G
Sbjct: 996 PDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLI---LNLG------- 1045
Query: 206 IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYI 265
I+ +V E+A IY+E + + N L+ Y
Sbjct: 1046 --------------------IAGMV-----EEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1080
Query: 266 NRNQLEMAESFYNRLVTKGIKPCYTTWELL 295
+ E A + Y +VT G P T+E L
Sbjct: 1081 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 136/327 (41%), Gaps = 6/327 (1%)
Query: 53 HSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTS- 111
+S+ N S A L EK ++ ++ LP ++L + + ++ Q + KNT
Sbjct: 760 YSFKHNNASG-ARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGC 818
Query: 112 -PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 170
PDV TYN L A + + + E+ + +P+ I+++ + S +K + A
Sbjct: 819 IPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALD 878
Query: 171 TLKE-MEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 229
+ M R Y L+ + G E ++++ M + N A Y +I+
Sbjct: 879 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGF 938
Query: 230 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 289
K GE + A ++ D + ++L+ +++ ++ L G+ P
Sbjct: 939 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDV 998
Query: 290 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 349
+ L+ G K ++E+ L F + S R PD + L G ++ A +
Sbjct: 999 VCYNLIINGLGKFHRLEEALVLFNEMKKS-RGITPDLYTYNSLILNLGIAGMVEEAGKIY 1057
Query: 350 VTLRNAG-HVSTEIYNSLLRTYAKAGK 375
++ AG + +N+L+R Y+ +GK
Sbjct: 1058 NEIQRAGLEPNVFTFNALIRGYSLSGK 1084
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 11/280 (3%)
Query: 45 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKC---PLPYNHMLNLYISNGQLDKV 99
PD T + LL +Y KS + + L E E +C + +N +++ + G +D
Sbjct: 820 PDVATYNFLLDAY---GKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDA 876
Query: 100 PQMLQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 157
+ +L ++ SP TY + + A++ F + P+ Y+ L +
Sbjct: 877 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILIN 936
Query: 158 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 217
+ K + A K M K R + YS L+ +G DE L ++++
Sbjct: 937 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNP 996
Query: 218 NDAEYTCVISSLVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAAYINRNQLEMAESF 276
+ Y +I+ L K E+A +++E + G T D N L+ +E A
Sbjct: 997 DVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1056
Query: 277 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 316
YN + G++P T+ L GY G+ E ++ +
Sbjct: 1057 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 2/258 (0%)
Query: 50 ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK- 108
+ Y ++ S A EKM G + N L G+ + Q+ LK
Sbjct: 440 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 499
Query: 109 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 168
PD VTYN+ + + + + A K E+ + +PD I ++L + K + ++A
Sbjct: 500 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEA 559
Query: 169 ATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISS 228
M++ + V Y++LL+ G E + +++ M+ N + +
Sbjct: 560 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 619
Query: 229 LVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPC 288
L K E A + + + D N ++ + Q++ A F++++ K + P
Sbjct: 620 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPD 678
Query: 289 YTTWELLTWGYLKKGQME 306
+ T L G +K G +E
Sbjct: 679 FVTLCTLLPGVVKAGLIE 696
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,123,521,279
Number of Sequences: 23463169
Number of extensions: 239993032
Number of successful extensions: 795684
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4481
Number of HSP's successfully gapped in prelim test: 4772
Number of HSP's that attempted gapping in prelim test: 718945
Number of HSP's gapped (non-prelim): 38584
length of query: 415
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 270
effective length of database: 8,957,035,862
effective search space: 2418399682740
effective search space used: 2418399682740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)