Query 014981
Match_columns 415
No_of_seqs 125 out of 676
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 01:57:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014981.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014981hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03140 DUF247: Plant protein 100.0 3E-109 6E-114 844.8 33.6 370 27-404 1-391 (391)
2 COG4575 ElaB Uncharacterized c 71.9 3.5 7.7E-05 34.3 2.6 20 386-406 81-100 (104)
3 PF09069 EF-hand_3: EF-hand; 63.6 22 0.00048 28.9 5.7 54 64-117 2-76 (90)
4 PRK10404 hypothetical protein; 62.3 7.6 0.00017 32.3 2.8 19 387-406 79-97 (101)
5 PF14770 TMEM18: Transmembrane 59.7 8.1 0.00018 33.3 2.6 47 363-412 56-102 (123)
6 PF07438 DUF1514: Protein of u 56.1 13 0.00027 28.2 2.8 21 389-409 2-22 (66)
7 PRK10132 hypothetical protein; 55.9 11 0.00024 31.7 2.8 20 386-406 84-103 (108)
8 PF12911 OppC_N: N-terminal TM 54.8 14 0.00031 26.6 2.9 34 380-413 8-41 (56)
9 PF11293 DUF3094: Protein of u 51.0 40 0.00087 24.7 4.6 34 363-401 10-43 (55)
10 PHA02103 hypothetical protein 43.3 52 0.0011 27.6 4.8 56 273-331 36-101 (135)
11 PF05957 DUF883: Bacterial pro 43.1 23 0.0005 28.6 2.8 20 386-406 71-90 (94)
12 PF15103 G0-G1_switch_2: G0/G1 35.2 38 0.00082 28.1 2.8 24 391-414 28-51 (102)
13 PF05421 DUF751: Protein of un 33.8 67 0.0015 24.2 3.7 30 384-413 30-59 (61)
14 cd00948 FBP_aldolase_I_a Fruct 31.0 64 0.0014 32.4 4.1 58 322-383 82-142 (330)
15 PF10961 DUF2763: Protein of u 29.6 68 0.0015 26.1 3.4 27 386-412 13-42 (91)
16 KOG3942 MIF4G domain-containin 24.7 56 0.0012 32.6 2.4 104 289-398 129-241 (348)
17 PF09820 AAA-ATPase_like: Pred 24.6 1E+02 0.0022 30.1 4.4 57 335-395 226-282 (284)
18 PF04971 Lysis_S: Lysis protei 23.7 1.1E+02 0.0024 23.6 3.3 33 376-408 20-52 (68)
19 PLN02227 fructose-bisphosphate 23.6 34 0.00074 35.0 0.8 70 310-383 118-194 (399)
20 KOG3110 Riboflavin kinase [Coe 23.2 52 0.0011 28.9 1.7 59 42-100 65-138 (153)
21 PTZ00019 fructose-bisphosphate 22.2 1.1E+02 0.0023 31.1 3.9 58 322-383 85-145 (355)
22 smart00413 ETS erythroblast tr 22.0 1.7E+02 0.0037 23.7 4.3 36 334-373 34-69 (87)
23 KOG4134 DNA-dependent RNA poly 20.8 1.2E+02 0.0026 28.9 3.7 41 21-72 21-61 (253)
No 1
>PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown.
Probab=100.00 E-value=2.6e-109 Score=844.77 Aligned_cols=370 Identities=41% Similarity=0.709 Sum_probs=332.2
Q ss_pred eeecCCcccccCCCCCccceeeeccccCCchhHhHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHhHHHHHhhhhccc
Q 014981 27 IYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTN---VSIEYFLTFIKVKEAELRNCYAETI 103 (415)
Q Consensus 27 I~rVP~~lr~~n~~aY~P~~VsIGPyHhg~~~L~~mE~~K~~~l~~~l~r~~---~~~~~~~~~i~~~e~~aR~~Y~e~~ 103 (415)
|||||+++|++|+++|+|++|||||||||+++|+.||++||+|++.|++|.+ .++++++++|+++|++||+||++++
T Consensus 1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~~~~~i~~~e~~~R~~Y~~~~ 80 (391)
T PF03140_consen 1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSGAPAESLEDYVEAIRSLEEEARACYAEDI 80 (391)
T ss_pred CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999999999999999999999999999999999999998 7899999999999999999999999
Q ss_pred C-CChHHHHHHHHHhHHHHHHHHHhhccCCCCCCCCC-CCCCCCchhhhhhhhhhcccCchHHHHHHHHHhhhcccCCCC
Q 014981 104 A-FNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDR-IYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDY 181 (415)
Q Consensus 104 ~-~~~~eF~~MmllDGCFiLe~~~~~~~~~~~~~~d~-~~~~~~~~~~i~~Dl~LLENQiPffVLe~L~~~~~~~~~~~~ 181 (415)
+ +++++|++||++|||||||+|++... ..+.+|| +++.+|....|++||+|||||||||||++||++...+. .
T Consensus 81 ~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~~~---~ 155 (391)
T PF03140_consen 81 DDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFGSK---S 155 (391)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcccc---c
Confidence 7 99999999999999999999998876 2345788 88999999999999999999999999999999998433 3
Q ss_pred cccchHHHHHHHhhccCCCCCCCCccccccccccCCCchhhhhhhcCCCC--CC-CC--CC------CCCcccCCHHhHH
Q 014981 182 YEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQ--SP-AQ--IG------FRGQKMPGAMELH 250 (415)
Q Consensus 182 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~HlLdL~~~~~~p~~--~~-~~--~~------~~~~~~~sAteL~ 250 (415)
....++.+++.+||....+...... .....+++|||||+|.+++|++ .. .+ +. .....+||||||+
T Consensus 156 ~~~~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~eL~ 232 (391)
T PF03140_consen 156 DVDESLIDLVLKFFYKHWPSWPPDE---PISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATELR 232 (391)
T ss_pred CccchHHHHHHhHhccccccccccc---cccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCCCHHHHH
Confidence 4557899999999942221111101 2233578999999999999932 11 11 11 1245799999999
Q ss_pred HcCcEEecCCCC-CCcceeEcCceEEeceEEeecCchhhhhhHHHHHHhc-CCccchhhHHHHHHhhcCChhhHHHHHHC
Q 014981 251 QTGVKFNVGTSK-NPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLNDYIIIMSYLAHTPEDGKLLIQN 328 (415)
Q Consensus 251 ~aGVkfk~~~~~-~llDI~F~~g~L~IP~l~id~~T~~llrNLiA~Eq~~-~~~~~vtsYv~fM~~Li~t~~DV~lL~~~ 328 (415)
+|||+||++++. +++||+|++|+|+||+|.||++|+++||||||||||+ ..+.+||||+.||++||+|++||++|+++
T Consensus 233 ~aGV~fk~~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~~~vtsY~~fm~~Li~t~~DV~lL~~k 312 (391)
T PF03140_consen 233 EAGVKFKPSETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTGSYVTSYVFFMDSLINTPEDVELLRRK 312 (391)
T ss_pred hCCcEEeeccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCCchHhHHHHHHHHHhCcHhhHHHHHhC
Confidence 999999999886 5999999999999999999999999999999999999 77899999999999999999999999999
Q ss_pred Cce--ecCChHHHHHHHHhhhccCCC-CCCcchHHHHHHHHhHhcCchhhhhhhhcccccccchHHHHHHHHHHHHHHH
Q 014981 329 GIV--GLGNSERLSNFFLSLIKECPM-GTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLT 404 (415)
Q Consensus 329 gIi--~lgsdeeva~lFn~L~~~~~~-~~~~y~~~~~~~ln~y~~~r~~~~~a~l~~~yf~npw~~is~~aA~ill~lT 404 (415)
||| ++|||+||++|||+||++++. .+++||.+++++||+||++||++|+|+++|+||+|||+++|++||+++|+||
T Consensus 313 gIi~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is~~aa~~ll~lT 391 (391)
T PF03140_consen 313 GIIVNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFISLVAAIILLLLT 391 (391)
T ss_pred CeEecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHhC
Confidence 999 899999999999999999987 4578999999999999999999999999999999999999999999999997
No 2
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=71.87 E-value=3.5 Score=34.28 Aligned_cols=20 Identities=35% Similarity=0.792 Sum_probs=14.9
Q ss_pred ccchHHHHHHHHHHHHHHHHH
Q 014981 386 NTPWASISVAGAVILLVLTLI 406 (415)
Q Consensus 386 ~npw~~is~~aA~ill~lT~i 406 (415)
.|||..|++-| ++.|+++++
T Consensus 81 e~PWq~VGvaA-aVGlllGlL 100 (104)
T COG4575 81 ENPWQGVGVAA-AVGLLLGLL 100 (104)
T ss_pred cCCchHHHHHH-HHHHHHHHH
Confidence 47999999855 567777654
No 3
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=63.65 E-value=22 Score=28.92 Aligned_cols=54 Identities=20% Similarity=0.455 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhhh-----hhHHHHHHHHH-------------HhHHHHHhhhhc---ccCCChHHHHHHHHHh
Q 014981 64 EHKLRYLRCFLQRTN-----VSIEYFLTFIK-------------VKEAELRNCYAE---TIAFNSDDFATMIFVD 117 (415)
Q Consensus 64 ~~K~~~l~~~l~r~~-----~~~~~~~~~i~-------------~~e~~aR~~Y~e---~~~~~~~eF~~MmllD 117 (415)
+.|.||+-+++...+ ..++.++..+. ..|..+|+|+.. .-+++.++|++.|..|
T Consensus 2 ~dKyRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 2 EDKYRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQLSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTTT-S-B-HHHHHHHHHT-
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccCCCCccCHHHHHHHHHhC
Confidence 358999999987643 13444433222 368899999976 4579999999988765
No 4
>PRK10404 hypothetical protein; Provisional
Probab=62.27 E-value=7.6 Score=32.27 Aligned_cols=19 Identities=53% Similarity=0.961 Sum_probs=15.0
Q ss_pred cchHHHHHHHHHHHHHHHHH
Q 014981 387 TPWASISVAGAVILLVLTLI 406 (415)
Q Consensus 387 npw~~is~~aA~ill~lT~i 406 (415)
|||..+++ ||.+.|++.++
T Consensus 79 ~Pw~avGi-aagvGlllG~L 97 (101)
T PRK10404 79 KPWQGIGV-GAAVGLVLGLL 97 (101)
T ss_pred CcHHHHHH-HHHHHHHHHHH
Confidence 89999997 44577787765
No 5
>PF14770 TMEM18: Transmembrane protein 18
Probab=59.70 E-value=8.1 Score=33.32 Aligned_cols=47 Identities=32% Similarity=0.395 Sum_probs=36.9
Q ss_pred HHHHhHhcCchhhhhhhhcccccccchHHHHHHHHHHHHHHHHHHHhhhh
Q 014981 363 EDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSV 412 (415)
Q Consensus 363 ~~ln~y~~~r~~~~~a~l~~~yf~npw~~is~~aA~ill~lT~iQT~~sv 412 (415)
+.+|+|..+.|+. .-+++||.+-=.++|++-++=+|+.+++..+..+
T Consensus 56 E~iN~~~a~nW~~---Fs~qnYFDs~G~Fisvv~s~PlLl~~~ii~~~~l 102 (123)
T PF14770_consen 56 EYINEYAARNWRS---FSKQNYFDSSGVFISVVFSAPLLLNCLIILVNWL 102 (123)
T ss_pred HHHHHHHHHHHHH---HhhccCcCCCCeeehHHHHHhHHHHHHHHHHHHH
Confidence 7899998877743 3468999999999999988777777777666544
No 6
>PF07438 DUF1514: Protein of unknown function (DUF1514); InterPro: IPR009999 This entry is represented by Bacteriophage phi PVL, Orf60. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several Staphylococcus aureus and related bacteriophage proteins of around 65 residues in length. The function of this family is unknown.
Probab=56.11 E-value=13 Score=28.24 Aligned_cols=21 Identities=29% Similarity=0.512 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 014981 389 WASISVAGAVILLVLTLIQTA 409 (415)
Q Consensus 389 w~~is~~aA~ill~lT~iQT~ 409 (415)
|.++|.+.|+++|++-.+|+-
T Consensus 2 WIiiSIvLai~lLI~l~~ns~ 22 (66)
T PF07438_consen 2 WIIISIVLAIALLISLSVNSE 22 (66)
T ss_pred hhhHHHHHHHHHHHHHhhhHH
Confidence 999999999999999988875
No 7
>PRK10132 hypothetical protein; Provisional
Probab=55.90 E-value=11 Score=31.67 Aligned_cols=20 Identities=20% Similarity=0.610 Sum_probs=15.2
Q ss_pred ccchHHHHHHHHHHHHHHHHH
Q 014981 386 NTPWASISVAGAVILLVLTLI 406 (415)
Q Consensus 386 ~npw~~is~~aA~ill~lT~i 406 (415)
.|||..+++.| .+.++++++
T Consensus 84 ~~Pw~svgiaa-gvG~llG~L 103 (108)
T PRK10132 84 ERPWCSVGTAA-AVGIFIGAL 103 (108)
T ss_pred hCcHHHHHHHH-HHHHHHHHH
Confidence 47999999854 577777765
No 8
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=54.78 E-value=14 Score=26.59 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=26.8
Q ss_pred hcccccccchHHHHHHHHHHHHHHHHHHHhhhhc
Q 014981 380 LRQNYFNTPWASISVAGAVILLVLTLIQTACSVI 413 (415)
Q Consensus 380 l~~~yf~npw~~is~~aA~ill~lT~iQT~~sv~ 413 (415)
..+.+++|+...+|++.-++++++.++..+.+-+
T Consensus 8 ~~~~f~~nk~a~~gl~il~~~vl~ai~~p~~~p~ 41 (56)
T PF12911_consen 8 AWRRFRRNKLAVIGLIILLILVLLAIFAPFISPY 41 (56)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3467788999999998888888888887766533
No 9
>PF11293 DUF3094: Protein of unknown function (DUF3094); InterPro: IPR021444 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=50.97 E-value=40 Score=24.71 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=26.7
Q ss_pred HHHHhHhcCchhhhhhhhcccccccchHHHHHHHHHHHH
Q 014981 363 EDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILL 401 (415)
Q Consensus 363 ~~ln~y~~~r~~~~~a~l~~~yf~npw~~is~~aA~ill 401 (415)
++|++|-++.||. .-|+=|+ ||..+.++.|+++.
T Consensus 10 ~~Vd~yL~a~~~~----VER~PFr-P~~Ll~~li~Vv~g 43 (55)
T PF11293_consen 10 QRVDEYLQAGVNQ----VERKPFR-PWRLLIVLIVVVIG 43 (55)
T ss_pred HHHHHHHhCCCCc----cccCCcc-hHHHHHHHHHHHHH
Confidence 7899999999984 3466676 99998888876553
No 10
>PHA02103 hypothetical protein
Probab=43.34 E-value=52 Score=27.58 Aligned_cols=56 Identities=14% Similarity=0.199 Sum_probs=43.0
Q ss_pred eEEeceEEeecCchhhhhhHHHHHHhc---CCc-------cchhhHHHHHHhhcCChhhHHHHHHCCce
Q 014981 273 IVKIPFVTIYDNTEKFYRNVLAFERMH---GYT-------RYLNDYIIIMSYLAHTPEDGKLLIQNGIV 331 (415)
Q Consensus 273 ~L~IP~l~id~~T~~llrNLiA~Eq~~---~~~-------~~vtsYv~fM~~Li~t~~DV~lL~~~gIi 331 (415)
.-+||.+..|..+.-+-|=.+-+|.|. +.+ .++-+|-.. .-..+|-|++-.+-||=
T Consensus 36 ~~e~pai~~~~~~~ei~rl~~f~~kck~~yp~gkgg~~df~~ipdyyry---f~ee~e~ie~we~ygve 101 (135)
T PHA02103 36 EYEIPAIDADRTKAEIVRLITFMDKCKAEYPRGKGGQADFNHIPDYYRY---FGEEAEGVELWEEYGVE 101 (135)
T ss_pred EEeccccccchhhHHHHHHHHHHHHHHhhCCCCCCCccccccChHHHHH---hcccchhhhHHHHhCcc
Confidence 457999999999999999999999998 221 345555543 34577888888888886
No 11
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=43.10 E-value=23 Score=28.58 Aligned_cols=20 Identities=30% Similarity=0.790 Sum_probs=14.7
Q ss_pred ccchHHHHHHHHHHHHHHHHH
Q 014981 386 NTPWASISVAGAVILLVLTLI 406 (415)
Q Consensus 386 ~npw~~is~~aA~ill~lT~i 406 (415)
.|||..+++.++ +++++..+
T Consensus 71 e~P~~svgiAag-vG~llG~L 90 (94)
T PF05957_consen 71 ENPWQSVGIAAG-VGFLLGLL 90 (94)
T ss_pred HChHHHHHHHHH-HHHHHHHH
Confidence 479999998665 66666654
No 12
>PF15103 G0-G1_switch_2: G0/G1 switch protein 2
Probab=35.17 E-value=38 Score=28.10 Aligned_cols=24 Identities=25% Similarity=0.385 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcc
Q 014981 391 SISVAGAVILLVLTLIQTACSVIG 414 (415)
Q Consensus 391 ~is~~aA~ill~lT~iQT~~sv~~ 414 (415)
.++.+.|++..++++++|+|+-++
T Consensus 28 vLGSvLA~~Gvv~GLVEtVCsPFs 51 (102)
T PF15103_consen 28 VLGSVLAFFGVVIGLVETVCSPFS 51 (102)
T ss_pred hhhhHHHHHHHHHHHHHHHhCccc
Confidence 456677889999999999998654
No 13
>PF05421 DUF751: Protein of unknown function (DUF751); InterPro: IPR008470 This family, Ycf33, contains several plant, cyanobacterial and algal chlorplast encoded proteins of unknown function. The family is exclusively found in phototrophic organisms and may therefore play a role in photosynthesis.
Probab=33.80 E-value=67 Score=24.21 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=25.8
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHhhhhc
Q 014981 384 YFNTPWASISVAGAVILLVLTLIQTACSVI 413 (415)
Q Consensus 384 yf~npw~~is~~aA~ill~lT~iQT~~sv~ 413 (415)
-++||-+.++++++++..+..+.+|+-++.
T Consensus 30 llk~p~tai~~i~~~~~~~~~l~~tL~aMl 59 (61)
T PF05421_consen 30 LLKNPVTAIALIGILIGGFIFLYFTLRAML 59 (61)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 357899999999999999999999887664
No 14
>cd00948 FBP_aldolase_I_a Fructose-1,6-bisphosphate aldolase. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). This family includes proteins found in vertebrates, plants, and bacterial plant pathogens. Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=31.01 E-value=64 Score=32.38 Aligned_cols=58 Identities=24% Similarity=0.345 Sum_probs=42.5
Q ss_pred HHHHHHCCce-ecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcC--chhhhhhhhccc
Q 014981 322 GKLLIQNGIV-GLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKS--PWHSWKANLRQN 383 (415)
Q Consensus 322 V~lL~~~gIi-~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~--r~~~~~a~l~~~ 383 (415)
|++|.++||| ++.=|+-+..+.+. .+-. +... ++++.+...+||.- |.-+||+.++-.
T Consensus 82 ~~~L~~~GIvPgIKVDkGl~~l~g~--~~e~-~t~G-LD~L~~R~~~y~~~GarFAKwRsVi~i~ 142 (330)
T cd00948 82 VDILKEKGIVPGIKVDKGLVPLAGT--DGET-TTQG-LDGLAERCAKYYKQGARFAKWRAVLKIG 142 (330)
T ss_pred HHHHHHCCCeeeEEeCCCccccCCC--CCCc-cCcC-hHHHHHHHHHHhhcCCcceeeheeeecc
Confidence 8899999999 88777766666543 2211 3444 99999999999875 456899887654
No 15
>PF10961 DUF2763: Protein of unknown function (DUF2763); InterPro: IPR024491 This entry represents an eukaryotic family of selenoproteins. It includes SelK, which seems to play an important role in protecting cells from endoplasmic reticulum stress-induced apoptosis [] and SelG, which may be involved in regulating the redox state of the cell [].
Probab=29.60 E-value=68 Score=26.12 Aligned_cols=27 Identities=22% Similarity=0.392 Sum_probs=19.9
Q ss_pred ccch---HHHHHHHHHHHHHHHHHHHhhhh
Q 014981 386 NTPW---ASISVAGAVILLVLTLIQTACSV 412 (415)
Q Consensus 386 ~npw---~~is~~aA~ill~lT~iQT~~sv 412 (415)
++|| .++-++-+++-+|..++||+++.
T Consensus 13 rspWrls~I~d~Fwgi~~fI~lFF~Tl~~p 42 (91)
T PF10961_consen 13 RSPWRLSRITDFFWGIINFIVLFFQTLFSP 42 (91)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3677 36667777777788888888874
No 16
>KOG3942 consensus MIF4G domain-containing protein [Translation, ribosomal structure and biogenesis]
Probab=24.72 E-value=56 Score=32.58 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=68.5
Q ss_pred hhhHHHHHHhc-C-CccchhhHHHHHHhhcCChhhHHHHHHCCc--e--ecCChHHHHHHHHhhhccCCC---CCCcchH
Q 014981 289 YRNVLAFERMH-G-YTRYLNDYIIIMSYLAHTPEDGKLLIQNGI--V--GLGNSERLSNFFLSLIKECPM---GTRFGYT 359 (415)
Q Consensus 289 lrNLiA~Eq~~-~-~~~~vtsYv~fM~~Li~t~~DV~lL~~~gI--i--~lgsdeeva~lFn~L~~~~~~---~~~~y~~ 359 (415)
.-|.++++..- . .....|+.-.+|-.|||++-|=+.|-+-|= + .. .+.--+-+..+||.++.. .+.....
T Consensus 129 ~m~~~ei~~si~n~sad~lt~~t~~mealin~a~~de~l~rc~~~~~r~av-egg~ggl~v~klC~n~~~~~~~gt~f~~ 207 (348)
T KOG3942|consen 129 MMKWVEIVTSICNISADLLTNLTMPMEALINPAYDDEMLFRCGPTIARQAV-EGGGGGLFVCKLCTNLGSSWRNGTQFMD 207 (348)
T ss_pred hhhHHHHHHHHHHhHHHHhhccchHHHHHhCcchhHHHHHHHHHHHHHHHH-hcCCCchhHHHHhhhhhhhhhccchHHH
Confidence 34578888766 3 334568889999999999998888877664 3 11 001112345577777655 3443588
Q ss_pred HHHHHHHhHhcCchhhhhhhhcccccccchHHHHHHHHH
Q 014981 360 NLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAV 398 (415)
Q Consensus 360 ~~~~~ln~y~~~r~~~~~a~l~~~yf~npw~~is~~aA~ 398 (415)
.++.-+..+|.-| ..++...+.--|.+|+++.-+
T Consensus 208 ~Lln~lrq~f~~r-----~gl~s~~~~rw~~fisfltel 241 (348)
T KOG3942|consen 208 ELLNLLRQGFLLR-----TGLSSLASCRWWRFISFLTEL 241 (348)
T ss_pred HHHHHHHHhhccc-----hhccchhHHHHHHHHHHHHHH
Confidence 8889999988866 355666666667777766543
No 17
>PF09820 AAA-ATPase_like: Predicted AAA-ATPase; InterPro: IPR018631 This entry is predicted to be an AAA-ATPase domain []. It is usually found together with IPR012547 from INTERPRO.
Probab=24.57 E-value=1e+02 Score=30.13 Aligned_cols=57 Identities=12% Similarity=0.259 Sum_probs=39.5
Q ss_pred ChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCchhhhhhhhcccccccchHHHHHH
Q 014981 335 NSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVA 395 (415)
Q Consensus 335 sdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r~~~~~a~l~~~yf~npw~~is~~ 395 (415)
+++||.++|+...+.... ... .....++|.++|+.-.-.+... ..--.|||.++..+
T Consensus 226 T~~Ev~~ll~~~~~~~~~-~~~-~~~~~~~lk~wYdGY~F~~~~~--~~~iYNP~Svl~~l 282 (284)
T PF09820_consen 226 TEEEVETLLKYYIENLAE-EQD-REELLEELKEWYDGYHFGESSE--GERIYNPWSVLNYL 282 (284)
T ss_pred CHHHHHHHHHHHHHHhhh-ccc-hHHHHHHHHHHcCCcccCCCCC--CCCEEChHHHHHHh
Confidence 778999999988766543 223 7788899999999764322110 23456999888765
No 18
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=23.68 E-value=1.1e+02 Score=23.62 Aligned_cols=33 Identities=27% Similarity=0.635 Sum_probs=24.6
Q ss_pred hhhhhcccccccchHHHHHHHHHHHHHHHHHHH
Q 014981 376 WKANLRQNYFNTPWASISVAGAVILLVLTLIQT 408 (415)
Q Consensus 376 ~~a~l~~~yf~npw~~is~~aA~ill~lT~iQT 408 (415)
|...+...+-+.-|.+|++++++++-++|.+--
T Consensus 20 wl~~lld~~sp~qW~aIGvi~gi~~~~lt~ltN 52 (68)
T PF04971_consen 20 WLLQLLDQFSPSQWAAIGVIGGIFFGLLTYLTN 52 (68)
T ss_pred HHHHHHhccCcccchhHHHHHHHHHHHHHHHhH
Confidence 444455666677899999999988888887643
No 19
>PLN02227 fructose-bisphosphate aldolase I
Probab=23.62 E-value=34 Score=34.99 Aligned_cols=70 Identities=16% Similarity=0.252 Sum_probs=49.2
Q ss_pred HHHHhhcCChhh----HHHHHHCCce-ecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCc--hhhhhhhhcc
Q 014981 310 IIMSYLAHTPED----GKLLIQNGIV-GLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSP--WHSWKANLRQ 382 (415)
Q Consensus 310 ~fM~~Li~t~~D----V~lL~~~gIi-~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r--~~~~~a~l~~ 382 (415)
.|=.-|=.+..| |++|.++||| ++.=|+-+..+.+. .+-. .... ++++.+...+||... .-+||+.++-
T Consensus 118 LFeETl~Q~~~dG~pf~d~L~~~GIVPGIKVDKGl~~l~g~--~~e~-~tqG-LDgL~~R~~~Y~~~GarFAKWRsVikI 193 (399)
T PLN02227 118 LFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGS--YDES-WCQG-LDGLASRTAAYYQQGARFAKWRTVVSI 193 (399)
T ss_pred cchhhccCcCcCCcCHHHHHHHCCCeeeEEcCCCcccCCCC--CCCc-cCCC-hHHHHHHHHHHHHcCCceeehheeecc
Confidence 333333344566 9999999999 88777777777654 2211 3444 999999999998864 4699998866
Q ss_pred c
Q 014981 383 N 383 (415)
Q Consensus 383 ~ 383 (415)
.
T Consensus 194 ~ 194 (399)
T PLN02227 194 P 194 (399)
T ss_pred C
Confidence 4
No 20
>KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism]
Probab=23.16 E-value=52 Score=28.86 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=37.3
Q ss_pred Cccceeeec--cccCCch---hHhHHHHHHHHHHHHHHHhh--h--------hhHHHHHHHHHHhHHHHHhhhh
Q 014981 42 YTPKMVSIG--PLHHGNE---ELKAMEEHKLRYLRCFLQRT--N--------VSIEYFLTFIKVKEAELRNCYA 100 (415)
Q Consensus 42 Y~P~~VsIG--PyHhg~~---~L~~mE~~K~~~l~~~l~r~--~--------~~~~~~~~~i~~~e~~aR~~Y~ 100 (415)
--|.++||| ||..++. ++..++..|.-+-..-++-. | .++++++++|..-.+.|+..-+
T Consensus 65 v~kMvmSIGwNP~Y~N~~Kt~E~hlih~f~~DFYge~l~~~IvGyiRpe~nf~slesLi~~I~~Di~vA~~~l~ 138 (153)
T KOG3110|consen 65 VFKMVMSIGWNPYYKNKKKTMELHLIHDFGEDFYGETLKVIIVGYIRPELNFDSLESLIEAIHGDIEVAKKVLD 138 (153)
T ss_pred ceeEEEEcccCcccCCcccceeeeeehhcccchhhheeeEEEEEeeccccCcchHHHHHHHHHhhHHHHHHhhc
Confidence 458999999 8877653 23334444444333333211 1 2689999999988888887554
No 21
>PTZ00019 fructose-bisphosphate aldolase; Provisional
Probab=22.21 E-value=1.1e+02 Score=31.13 Aligned_cols=58 Identities=26% Similarity=0.407 Sum_probs=41.4
Q ss_pred HHHHHHCCce-ecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCc--hhhhhhhhccc
Q 014981 322 GKLLIQNGIV-GLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSP--WHSWKANLRQN 383 (415)
Q Consensus 322 V~lL~~~gIi-~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r--~~~~~a~l~~~ 383 (415)
|++|+++||| ++.=|+-+..+ .+- .+-. +... ++++.+...+||.-. .-+||+.++-.
T Consensus 85 ~~~L~~~GIvPgIKVDkGl~~l-~G~-~~e~-~t~G-LD~L~~R~~~y~~~GarFAKwRsVi~i~ 145 (355)
T PTZ00019 85 VELLKEKGIVPGIKVDKGLVTL-PGT-DGET-STQG-LDGLAERAKKYYKAGARFAKWRAVLKID 145 (355)
T ss_pred HHHHHHCCCeeeEEcCCCccCC-CCC-CCCc-cCcC-hHHHHHHHHHHHhcCCceeeeeeeeeec
Confidence 8899999999 88777666655 322 1111 3444 999999999998754 56899887653
No 22
>smart00413 ETS erythroblast transformation specific domain. variation of the helix-turn-helix motif
Probab=21.97 E-value=1.7e+02 Score=23.68 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=26.8
Q ss_pred CChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCch
Q 014981 334 GNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPW 373 (415)
Q Consensus 334 gsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r~ 373 (415)
-+.++||+++-.- |+- ++=+ |.++.+.+.-||++.-
T Consensus 34 ~~~~~vA~lWG~~-Knk--~~M~-YeklSRaLRyyy~~~i 69 (87)
T smart00413 34 VDPEEVARLWGQR-KNK--PNMN-YEKLSRALRYYYKKNI 69 (87)
T ss_pred cCHHHHHHHHhhh-cCC--CCCC-HHHHHHHHHHHHhcCc
Confidence 3568999999754 322 2335 9999999999999864
No 23
>KOG4134 consensus DNA-dependent RNA polymerase I [Transcription]
Probab=20.83 E-value=1.2e+02 Score=28.91 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=29.9
Q ss_pred CCCCceeeecCCcccccCCCCCccceeeeccccCCchhHhHHHHHHHHHHHH
Q 014981 21 LSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRC 72 (415)
Q Consensus 21 ~~~~~~I~rVP~~lr~~n~~aY~P~~VsIGPyHhg~~~L~~mE~~K~~~l~~ 72 (415)
.+..-|++++|-.+ .+|+||||-.++.-..||+|=-.-+..
T Consensus 21 nsp~sclv~~t~dl-----------hlalaP~yl~npl~~~i~ehld~~vl~ 61 (253)
T KOG4134|consen 21 NSPESCLVCITTDL-----------HLALAPYYLANPLHALIEEHLDTKVLF 61 (253)
T ss_pred cCCcceEEEeeehe-----------eeeecchhhcchhHHHHHHHhhHHHhh
Confidence 45567999999764 689999999887666777765443333
Done!