Query 014981
Match_columns 415
No_of_seqs 125 out of 676
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 04:34:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014981.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014981hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eg3a2 a.39.1.7 (A:210-306) D 45.9 16 0.0012 27.1 5.2 53 64-116 3-78 (97)
2 d1duxc_ a.4.5.21 (C:) Elk-1 {H 27.2 41 0.003 24.2 4.7 42 328-373 27-68 (86)
3 d1yo5c1 a.4.5.21 (C:247-334) S 23.5 46 0.0033 24.0 4.4 43 327-373 29-71 (88)
4 d1awca_ a.4.5.21 (A:) GA bindi 23.3 45 0.0033 25.0 4.4 66 329-398 27-94 (110)
5 d1v54g_ f.23.2.1 (G:) Mitochon 18.8 34 0.0025 24.5 2.7 24 387-410 14-37 (84)
6 d1wwxa1 a.4.5.21 (A:8-101) E74 15.8 62 0.0046 23.5 3.6 42 327-372 28-69 (94)
7 d2i4ra1 c.149.1.1 (A:4-79) V-t 14.2 25 0.0018 24.5 0.9 23 28-50 54-76 (76)
8 d1puee_ a.4.5.21 (E:) Transcri 13.3 82 0.006 22.5 3.6 42 328-372 28-71 (88)
9 d1flia_ a.4.5.21 (A:) Fli-1 {H 12.8 1.1E+02 0.0078 22.3 4.2 41 329-373 32-72 (98)
10 d2outa1 a.140.3.2 (A:94-131) U 12.0 35 0.0026 19.8 0.9 16 247-262 6-21 (38)
No 1
>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.94 E-value=16 Score=27.11 Aligned_cols=53 Identities=19% Similarity=0.240 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhh-----hhHHHHHHHHH---------------HhHHHHHhhhhcc---cCCChHHHHHHHHH
Q 014981 64 EHKLRYLRCFLQRTN-----VSIEYFLTFIK---------------VKEAELRNCYAET---IAFNSDDFATMIFV 116 (415)
Q Consensus 64 ~~K~~~l~~~l~r~~-----~~~~~~~~~i~---------------~~e~~aR~~Y~e~---~~~~~~eF~~Mmll 116 (415)
+.|.||+-+.+...+ ..++.++..+. .+|..+|+|+... -+++.++|++-|..
T Consensus 3 ~dKyRYlF~qisd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~~~~~~i~~~~FL~wl~~ 78 (97)
T d1eg3a2 3 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRL 78 (97)
T ss_dssp HHHHHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBCHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhccCCCCcccHHHHHHHHHh
Confidence 468999999987643 13444443322 2488999999633 36888888877654
No 2
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.23 E-value=41 Score=24.16 Aligned_cols=42 Identities=19% Similarity=0.221 Sum_probs=30.1
Q ss_pred CCceecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCch
Q 014981 328 NGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPW 373 (415)
Q Consensus 328 ~gIi~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r~ 373 (415)
+|++-+-+.++||+++-. .|+- ++=+ |.++.+.+.-||++.-
T Consensus 27 ~g~Fklv~~~~VA~lWG~-~Knk--~~Mn-YeklSRaLRyyY~~~i 68 (86)
T d1duxc_ 27 GGEFKLVDAEEVARLWGL-RKNK--TNMN-YDKLSRALRYYYDKNI 68 (86)
T ss_dssp TTEEECTTHHHHHHHHHH-TTTC--SCCC-HHHHHHHHHHHHTTTS
T ss_pred CCEEEecCHHHHHHHHHh-ccCC--CCCC-HHHHHHHHHHHHhccc
Confidence 455534567999999953 3432 2335 9999999999998763
No 3
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.54 E-value=46 Score=23.99 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=29.9
Q ss_pred HCCceecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCch
Q 014981 327 QNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPW 373 (415)
Q Consensus 327 ~~gIi~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r~ 373 (415)
++|++-+-+.++||+++-.- |+- ++=+ |.++.+.+.-||++.-
T Consensus 29 ~~g~Fkl~~~~~VA~lWG~~-Knk--~~M~-YeklSRALRyYY~~~i 71 (88)
T d1yo5c1 29 EKGIFKIEDSAQVARLWGIR-KNR--PAMN-YDKLSRSIRQYYKKGI 71 (88)
T ss_dssp TTTEEEESCHHHHHHHHHHH-HTC--TTCC-HHHHHHHHHHTTTTTS
T ss_pred CCceEEecCHHHHHHHHHHh-hcC--CCCC-HHHHHHHHHHHHhccc
Confidence 34555345678999999544 332 2335 9999999999998763
No 4
>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.27 E-value=45 Score=25.03 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=45.7
Q ss_pred CceecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCchh-hhh-hhhcccccccchHHHHHHHHH
Q 014981 329 GIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWH-SWK-ANLRQNYFNTPWASISVAGAV 398 (415)
Q Consensus 329 gIi~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r~~-~~~-a~l~~~yf~npw~~is~~aA~ 398 (415)
|++-+-+.++||+++- ..|+- +.-+ |.++.+.|.-||.+.-. +.. ..+...|..+||..++.-++-
T Consensus 27 geFkl~d~e~VA~lWG-~~Knk--~~M~-YeklSRaLRyYY~~~il~Kv~g~rl~Y~F~~d~~~~~~~~~~~ 94 (110)
T d1awca_ 27 GEFKLNQPELVAQKWG-QRKNK--PTMN-YEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAE 94 (110)
T ss_dssp SEEECSSHHHHHHHHH-HHHTC--TTCC-HHHHHHHHHGGGGSSSEEECTTSTTEEEECSCHHHHTSSCHHH
T ss_pred CEEEeCCHHHHHHHHH-HhhCC--Cccc-HHHHHHHHHHHHhcccEEecCCcEEEEeccCCHHHHhCCCHHH
Confidence 4443457799999995 33432 2335 99999999999998742 222 346677888999887765553
No 5
>d1v54g_ f.23.2.1 (G:) Mitochondrial cytochrome c oxidase subunit VIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=18.77 E-value=34 Score=24.48 Aligned_cols=24 Identities=13% Similarity=0.206 Sum_probs=20.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhh
Q 014981 387 TPWASISVAGAVILLVLTLIQTAC 410 (415)
Q Consensus 387 npw~~is~~aA~ill~lT~iQT~~ 410 (415)
+-|+-||+++|+-.++++.+.++.
T Consensus 14 ~lWkkis~~va~P~i~l~~~n~~~ 37 (84)
T d1v54g_ 14 RTWRFLTFGLALPSVALCTLNSWL 37 (84)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 459999999999999999888763
No 6
>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.80 E-value=62 Score=23.51 Aligned_cols=42 Identities=24% Similarity=0.320 Sum_probs=29.8
Q ss_pred HCCceecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCc
Q 014981 327 QNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSP 372 (415)
Q Consensus 327 ~~gIi~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r 372 (415)
++|++-+-+.++||+++-.-- +- +.=+ |.++.+.|.-||.+.
T Consensus 28 ~~g~Fkl~d~~~VA~lWG~~K-~~--~~M~-YeklSRaLRyYY~~~ 69 (94)
T d1wwxa1 28 EQGIFRVVKSEALAKMWGQRK-KN--DRMT-YEKLSRALRYYYKTG 69 (94)
T ss_dssp TTTEEECSCHHHHHHHHHHHH-TC--TTCC-HHHHHHHHHHHHHHT
T ss_pred CCcEEEEcCHHHHHHHHHhhc-CC--CCCc-HHHHHHHHHHHHhcc
Confidence 445553446789999997553 32 2335 999999999999865
No 7
>d2i4ra1 c.149.1.1 (A:4-79) V-type ATP synthase subunit F, AtpF {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=14.25 E-value=25 Score=24.54 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=19.2
Q ss_pred eecCCcccccCCCCCccceeeec
Q 014981 28 YRVPQGWRCLHPNDYTPKMVSIG 50 (415)
Q Consensus 28 ~rVP~~lr~~n~~aY~P~~VsIG 50 (415)
-++|+.+++.-.+.-.|.++.||
T Consensus 54 ~~i~~~i~~~~~~~~~P~Vi~Ig 76 (76)
T d2i4ra1 54 KKLPPVLRREIDEKVEPTFVSVG 76 (76)
T ss_dssp TTSCHHHHTTTTTCCSSEEEEEC
T ss_pred HHhhHHHHHHHhcCCCCEEEecC
Confidence 36678888877888899999998
No 8
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.33 E-value=82 Score=22.53 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=28.9
Q ss_pred CCce-ec-CChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCc
Q 014981 328 NGIV-GL-GNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSP 372 (415)
Q Consensus 328 ~gIi-~l-gsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r 372 (415)
+||+ .. .+.++||+++-.--++- +.=+ |.++.+.|.-||++.
T Consensus 28 ~g~F~fv~~~~e~VA~lWG~~K~Nr--~~Mn-YeklSRaLRyYY~~~ 71 (88)
T d1puee_ 28 KGTFQFSSKHKEALAHRWGIQKGNR--KKMT-YEKMARALRNYGKTG 71 (88)
T ss_dssp TTEEEECTTTHHHHHHHHHHHHTCS--SCCC-HHHHHHHHHHHHHHS
T ss_pred CceEEEEeCCHHHHHHHHHhhcCCC--CCCc-HHHHHHHHHHHHhcc
Confidence 5666 33 34678999997554321 1225 999999999999865
No 9
>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.76 E-value=1.1e+02 Score=22.33 Aligned_cols=41 Identities=15% Similarity=0.187 Sum_probs=29.1
Q ss_pred CceecCChHHHHHHHHhhhccCCCCCCcchHHHHHHHHhHhcCch
Q 014981 329 GIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPW 373 (415)
Q Consensus 329 gIi~lgsdeeva~lFn~L~~~~~~~~~~y~~~~~~~ln~y~~~r~ 373 (415)
|++-+-+.++||+++-.- |+- ++=+ |.++.+.|.-||++.-
T Consensus 32 geFkl~~~~~VA~lWG~~-Knk--~~M~-YeklSRaLRyYY~~~i 72 (98)
T d1flia_ 32 GEFKMTDPDEVARRWGER-KSK--PNMN-YDKLSRALRYYYDKNI 72 (98)
T ss_dssp SSCEECCHHHHHHHHHHH-TCC--TTCS-SHHHHHHHHHHHHTTS
T ss_pred CEEEeCCHHHHHHHHHHh-hcC--CCcc-HHHHHHHHHHHHhccc
Confidence 444345679999999543 332 2335 9999999999999763
No 10
>d2outa1 a.140.3.2 (A:94-131) Uncharacterized protein HI1507 in Mu-like prophage FluMu region {Haemophilus influenzae [TaxId: 727]}
Probab=11.96 E-value=35 Score=19.85 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=12.6
Q ss_pred HhHHHcCcEEecCCCC
Q 014981 247 MELHQTGVKFNVGTSK 262 (415)
Q Consensus 247 teL~~aGVkfk~~~~~ 262 (415)
.+|-+.||.||.+.+.
T Consensus 6 aqltergitfkqsatk 21 (38)
T d2outa1 6 AQLTERGITFKQSATK 21 (38)
T ss_dssp HHHHHHTCCCSSSCCS
T ss_pred HHHHHcCceeeccchh
Confidence 4788999999987553
Done!