Query 014982
Match_columns 415
No_of_seqs 111 out of 221
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 01:57:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014982.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014982hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00769 AAA ADP/ATP carrier 100.0 2.9E-65 6.2E-70 532.8 34.5 326 22-396 1-345 (472)
2 PF03219 TLC: TLC ATP/ADP tran 100.0 1.3E-62 2.7E-67 515.1 32.1 338 8-394 4-359 (491)
3 COG3202 ATP/ADP translocase [E 100.0 1.2E-60 2.6E-65 491.1 34.4 341 5-392 4-360 (509)
4 TIGR00900 2A0121 H+ Antiporter 98.9 5.2E-06 1.1E-10 80.9 31.9 247 60-389 33-282 (365)
5 PRK11195 lysophospholipid tran 98.8 7.5E-06 1.6E-10 83.5 30.8 264 32-386 7-273 (393)
6 PRK15402 multidrug efflux syst 98.8 3.9E-05 8.4E-10 77.8 32.5 148 30-231 15-165 (406)
7 PRK09528 lacY galactoside perm 98.7 5.2E-06 1.1E-10 84.8 25.8 76 26-103 8-86 (420)
8 PF07690 MFS_1: Major Facilita 98.7 6.1E-06 1.3E-10 80.2 25.0 143 35-231 3-149 (352)
9 TIGR00710 efflux_Bcr_CflA drug 98.7 5.3E-05 1.2E-09 75.0 32.0 256 38-388 15-276 (385)
10 PRK09874 drug efflux system pr 98.7 0.0001 2.2E-09 74.0 33.9 145 32-231 18-170 (408)
11 PRK03545 putative arabinose tr 98.7 0.00012 2.6E-09 73.9 32.9 149 30-232 11-162 (390)
12 TIGR00882 2A0105 oligosacchari 98.7 2.1E-05 4.6E-10 79.5 27.2 280 30-389 4-289 (396)
13 PRK10054 putative transporter; 98.7 3.1E-05 6.7E-10 79.0 28.4 152 26-231 5-159 (395)
14 TIGR00893 2A0114 d-galactonate 98.6 3E-05 6.4E-10 75.7 26.2 260 50-385 20-282 (399)
15 PF01306 LacY_symp: LacY proto 98.6 3.4E-05 7.3E-10 80.4 27.8 296 24-406 3-315 (412)
16 PF05977 MFS_3: Transmembrane 98.6 0.00019 4.2E-09 77.0 32.0 235 66-386 50-286 (524)
17 PRK10504 putative transporter; 98.5 0.00023 5E-09 73.6 31.3 153 25-231 7-162 (471)
18 TIGR00881 2A0104 phosphoglycer 98.5 3.2E-05 7E-10 75.6 23.5 115 60-228 29-144 (379)
19 PRK11102 bicyclomycin/multidru 98.5 0.0004 8.7E-09 69.1 31.0 238 59-389 24-265 (377)
20 PRK11652 emrD multidrug resist 98.5 0.00073 1.6E-08 68.1 32.6 145 33-231 13-160 (394)
21 PRK11128 putative 3-phenylprop 98.5 0.00024 5.2E-09 71.7 28.8 264 29-389 5-275 (382)
22 PRK10473 multidrug efflux syst 98.5 0.00099 2.2E-08 67.0 32.8 145 33-231 8-155 (392)
23 PRK11646 multidrug resistance 98.5 0.00097 2.1E-08 68.2 33.0 146 33-232 15-163 (400)
24 TIGR00901 2A0125 AmpG-related 98.3 0.00064 1.4E-08 67.4 27.8 177 175-389 90-280 (356)
25 TIGR00895 2A0115 benzoate tran 98.3 0.0007 1.5E-08 66.7 27.7 118 60-231 51-169 (398)
26 TIGR00891 2A0112 putative sial 98.3 0.0015 3.2E-08 64.9 30.0 155 23-231 7-164 (405)
27 PRK06814 acylglycerophosphoeth 98.3 0.00032 6.8E-09 80.9 28.7 163 183-380 123-287 (1140)
28 PRK10489 enterobactin exporter 98.3 0.00041 8.9E-09 70.6 26.3 124 59-231 50-174 (417)
29 PRK12307 putative sialic acid 98.3 0.0015 3.3E-08 66.3 30.4 129 44-228 38-166 (426)
30 PRK08633 2-acyl-glycerophospho 98.3 0.00093 2E-08 76.6 31.2 234 69-385 55-300 (1146)
31 TIGR00897 2A0118 polyol permea 98.3 0.0025 5.3E-08 64.9 31.1 152 29-231 14-170 (402)
32 PRK11902 ampG muropeptide tran 98.3 0.0025 5.5E-08 64.7 31.1 171 179-389 105-281 (402)
33 TIGR00886 2A0108 nitrite extru 98.3 0.0032 6.9E-08 62.1 30.8 139 34-227 7-149 (366)
34 PRK11043 putative transporter; 98.3 0.0041 8.8E-08 62.8 32.2 139 37-231 15-158 (401)
35 PRK11663 regulatory protein Uh 98.3 0.0031 6.6E-08 65.1 31.7 129 47-231 46-175 (434)
36 PRK11551 putative 3-hydroxyphe 98.3 0.0032 7E-08 63.4 31.1 124 49-228 40-163 (406)
37 TIGR00902 2A0127 phenyl propri 98.3 0.0035 7.5E-08 63.4 31.0 265 30-389 6-275 (382)
38 TIGR00712 glpT glycerol-3-phos 98.2 0.0024 5.2E-08 65.8 30.0 119 58-226 58-176 (438)
39 TIGR00890 2A0111 Oxalate/Forma 98.2 0.0035 7.7E-08 61.1 29.2 52 46-101 25-76 (377)
40 PRK10091 MFS transport protein 98.2 0.0044 9.6E-08 62.5 30.5 144 33-231 8-155 (382)
41 PRK10213 nepI ribonucleoside t 98.2 0.011 2.4E-07 60.3 33.4 119 60-232 54-173 (394)
42 PRK11010 ampG muropeptide tran 98.2 0.0069 1.5E-07 64.1 32.6 155 22-229 6-168 (491)
43 PRK15403 multidrug efflux syst 98.2 0.0072 1.6E-07 62.1 31.3 45 188-232 124-169 (413)
44 TIGR00711 efflux_EmrB drug res 98.1 0.0044 9.5E-08 63.8 29.6 147 31-231 5-154 (485)
45 cd06174 MFS The Major Facilita 98.1 0.0065 1.4E-07 58.4 28.4 236 34-387 5-245 (352)
46 PRK09556 uhpT sugar phosphate 98.1 0.0031 6.8E-08 65.6 27.8 147 31-228 28-182 (467)
47 TIGR00792 gph sugar (Glycoside 98.1 0.0016 3.5E-08 66.2 24.2 162 188-387 119-290 (437)
48 PRK14995 methyl viologen resis 98.1 0.017 3.7E-07 60.8 32.4 148 30-231 8-159 (495)
49 PRK11273 glpT sn-glycerol-3-ph 98.0 0.013 2.8E-07 60.7 31.0 47 60-108 62-108 (452)
50 TIGR00899 2A0120 sugar efflux 98.0 0.014 3.1E-07 57.5 29.9 58 37-98 6-68 (375)
51 PRK03699 putative transporter; 98.0 0.016 3.5E-07 58.7 30.4 148 27-228 6-155 (394)
52 PRK12382 putative transporter; 97.9 0.015 3.2E-07 58.5 27.4 151 30-231 17-176 (392)
53 PLN00028 nitrate transmembrane 97.9 0.048 1E-06 57.3 33.4 81 18-100 26-108 (476)
54 PRK10429 melibiose:sodium symp 97.9 0.0077 1.7E-07 63.0 25.8 171 186-389 124-301 (473)
55 PRK10133 L-fucose transporter; 97.9 0.049 1.1E-06 56.7 33.8 80 29-110 27-108 (438)
56 PRK03633 putative MFS family t 97.9 0.032 6.9E-07 56.2 29.3 139 32-228 10-154 (381)
57 PRK11462 putative transporter; 97.9 0.041 9E-07 57.7 31.0 55 174-228 115-170 (460)
58 TIGR02332 HpaX 4-hydroxyphenyl 97.8 0.03 6.4E-07 57.5 27.8 115 60-228 42-156 (412)
59 TIGR00879 SP MFS transporter, 97.8 0.0032 6.8E-08 63.4 20.0 114 60-224 70-183 (481)
60 TIGR00896 CynX cyanate transpo 97.8 0.042 9.1E-07 54.5 27.7 122 49-228 25-146 (355)
61 PRK05122 major facilitator sup 97.7 0.045 9.8E-07 55.1 27.9 157 27-232 14-177 (399)
62 TIGR00903 2A0129 major facilit 97.7 0.074 1.6E-06 54.2 29.8 43 189-231 99-142 (368)
63 PRK03893 putative sialic acid 97.7 0.086 1.9E-06 54.7 30.5 153 25-231 17-172 (496)
64 COG2814 AraJ Arabinose efflux 97.6 0.13 2.7E-06 53.7 30.0 274 23-397 8-289 (394)
65 TIGR00883 2A0106 metabolite-pr 97.6 0.054 1.2E-06 53.1 25.4 38 191-228 119-156 (394)
66 TIGR00894 2A0114euk Na(+)-depe 97.6 0.063 1.4E-06 55.5 26.9 41 188-228 151-191 (465)
67 TIGR00898 2A0119 cation transp 97.6 0.018 3.9E-07 60.1 22.8 113 62-228 128-240 (505)
68 PRK09669 putative symporter Ya 97.6 0.046 1E-06 56.4 25.4 41 188-228 129-170 (444)
69 TIGR00885 fucP L-fucose:H+ sym 97.5 0.16 3.4E-06 52.5 33.7 144 29-227 4-153 (410)
70 TIGR00892 2A0113 monocarboxyla 97.5 0.17 3.7E-06 52.8 31.0 40 191-231 131-171 (455)
71 TIGR00889 2A0110 nucleoside tr 97.4 0.12 2.6E-06 53.3 26.2 82 308-389 201-286 (418)
72 PRK09705 cynX putative cyanate 97.4 0.2 4.4E-06 50.9 27.7 49 60-110 43-91 (393)
73 TIGR00805 oat sodium-independe 97.4 0.049 1.1E-06 59.8 23.8 42 187-228 191-232 (633)
74 PF13347 MFS_2: MFS/sugar tran 97.3 0.0078 1.7E-07 61.9 16.2 181 173-389 108-295 (428)
75 PRK10489 enterobactin exporter 97.3 0.048 1E-06 55.5 21.5 67 185-251 329-398 (417)
76 TIGR01301 GPH_sucrose GPH fami 97.3 0.32 6.9E-06 51.9 27.9 163 29-227 5-175 (477)
77 TIGR01299 synapt_SV2 synaptic 97.2 0.64 1.4E-05 52.3 34.4 127 46-228 189-315 (742)
78 PRK15034 nitrate/nitrite trans 97.2 0.47 1E-05 50.5 33.8 38 189-226 148-185 (462)
79 PRK09584 tppB putative tripept 97.2 0.19 4.1E-06 53.4 24.9 151 29-232 22-179 (500)
80 PRK11551 putative 3-hydroxyphe 97.1 0.034 7.3E-07 56.0 18.0 44 185-228 325-368 (406)
81 TIGR00924 yjdL_sub1_fam amino 97.1 0.2 4.3E-06 52.9 24.0 145 31-232 13-170 (475)
82 PRK09848 glucuronide transport 97.0 0.5 1.1E-05 48.8 25.5 83 303-389 216-299 (448)
83 TIGR00880 2_A_01_02 Multidrug 97.0 0.056 1.2E-06 44.6 15.1 46 183-228 66-111 (141)
84 PRK03893 putative sialic acid 96.9 0.049 1.1E-06 56.5 17.3 45 188-232 386-431 (496)
85 PRK10207 dipeptide/tripeptide 96.8 0.067 1.4E-06 56.8 17.9 148 28-231 14-171 (489)
86 PRK09952 shikimate transporter 96.7 0.9 1.9E-05 47.0 25.3 39 190-228 147-185 (438)
87 TIGR01299 synapt_SV2 synaptic 96.7 0.14 3.1E-06 57.5 20.3 47 185-231 665-711 (742)
88 PRK15462 dipeptide/tripeptide 96.7 1.1 2.5E-05 47.9 27.7 41 191-231 123-166 (493)
89 PRK05122 major facilitator sup 96.6 0.39 8.4E-06 48.3 21.1 61 191-251 325-387 (399)
90 TIGR00883 2A0106 metabolite-pr 96.6 0.07 1.5E-06 52.3 14.8 152 30-231 221-377 (394)
91 PRK15011 sugar efflux transpor 96.4 1.3 2.8E-05 44.8 32.4 27 206-232 145-172 (393)
92 cd06174 MFS The Major Facilita 96.4 0.16 3.5E-06 48.7 15.9 150 28-231 175-329 (352)
93 PRK15075 citrate-proton sympor 96.4 1.4 3.1E-05 45.2 29.2 38 190-227 139-176 (434)
94 PRK10406 alpha-ketoglutarate t 96.4 1.5 3.2E-05 45.2 27.4 39 189-227 145-183 (432)
95 PF05977 MFS_3: Transmembrane 96.3 1 2.2E-05 48.6 23.2 169 26-250 219-391 (524)
96 PRK11902 ampG muropeptide tran 96.3 0.7 1.5E-05 46.9 20.6 71 188-258 323-395 (402)
97 TIGR00890 2A0111 Oxalate/Forma 96.2 0.16 3.5E-06 49.4 15.1 46 187-232 314-360 (377)
98 TIGR00893 2A0114 d-galactonate 96.2 0.24 5.1E-06 48.2 16.2 47 185-231 328-375 (399)
99 PRK12307 putative sialic acid 96.2 0.3 6.5E-06 49.5 17.4 45 187-231 340-385 (426)
100 PF03825 Nuc_H_symport: Nucleo 96.2 2 4.4E-05 44.6 27.2 63 33-98 7-73 (400)
101 TIGR00899 2A0120 sugar efflux 96.2 0.76 1.7E-05 45.2 19.6 43 188-231 308-351 (375)
102 TIGR02718 sider_RhtX_FptX side 96.1 1.8 3.9E-05 43.6 31.3 79 307-389 200-279 (390)
103 PRK09705 cynX putative cyanate 96.1 0.65 1.4E-05 47.2 19.3 44 189-232 313-358 (393)
104 PRK15011 sugar efflux transpor 96.0 1.5 3.2E-05 44.5 21.4 41 190-231 327-368 (393)
105 PF11700 ATG22: Vacuole efflux 95.9 1.2 2.6E-05 47.5 20.7 152 28-228 281-440 (477)
106 TIGR00879 SP MFS transporter, 95.8 0.42 9.2E-06 48.0 16.4 47 185-231 400-447 (481)
107 TIGR00895 2A0115 benzoate tran 95.8 0.54 1.2E-05 46.2 16.9 44 183-226 353-396 (398)
108 PRK11010 ampG muropeptide tran 95.8 1.3 2.8E-05 46.9 20.7 68 185-252 333-402 (491)
109 PRK03633 putative MFS family t 95.8 1.5 3.3E-05 44.0 20.3 44 189-232 306-350 (381)
110 TIGR00892 2A0113 monocarboxyla 95.8 0.12 2.6E-06 53.9 12.6 43 186-228 351-393 (455)
111 KOG2533 Permease of the major 95.7 1.4 3.1E-05 47.2 20.5 166 193-377 159-335 (495)
112 PRK09528 lacY galactoside perm 95.7 0.39 8.4E-06 49.0 15.6 44 188-231 335-380 (420)
113 PRK03699 putative transporter; 95.6 1.1 2.3E-05 45.4 18.5 43 188-231 314-357 (394)
114 PRK12382 putative transporter; 95.6 1.5 3.2E-05 44.0 19.2 45 188-232 322-367 (392)
115 PRK10642 proline/glycine betai 95.5 4 8.7E-05 42.8 31.1 110 69-227 65-177 (490)
116 TIGR00900 2A0121 H+ Antiporter 95.4 1.1 2.4E-05 43.4 17.2 45 184-228 317-361 (365)
117 PF07690 MFS_1: Major Facilita 95.4 0.2 4.4E-06 48.4 11.9 119 51-221 234-352 (352)
118 PRK09874 drug efflux system pr 95.4 2 4.4E-05 42.9 19.4 45 188-232 331-376 (408)
119 TIGR00806 rfc RFC reduced fola 95.3 5.1 0.00011 43.2 27.8 297 38-406 29-356 (511)
120 TIGR02718 sider_RhtX_FptX side 95.2 1.8 3.9E-05 43.5 18.5 60 188-247 323-385 (390)
121 TIGR00898 2A0119 cation transp 95.2 1.5 3.2E-05 45.7 18.3 45 186-231 428-472 (505)
122 PRK10406 alpha-ketoglutarate t 95.2 3.1 6.8E-05 42.7 20.3 46 186-231 354-400 (432)
123 PRK09952 shikimate transporter 95.1 3.7 8E-05 42.5 20.8 45 184-228 359-404 (438)
124 TIGR00889 2A0110 nucleoside tr 94.8 3.7 8E-05 42.3 19.8 38 191-228 331-369 (418)
125 TIGR00792 gph sugar (Glycoside 94.8 1.5 3.2E-05 44.6 16.6 112 63-227 259-377 (437)
126 PRK10077 xylE D-xylose transpo 94.8 5.7 0.00012 40.8 22.5 122 61-227 55-179 (479)
127 TIGR00891 2A0112 putative sial 94.8 1.1 2.4E-05 44.3 15.2 46 186-231 346-392 (405)
128 PRK11273 glpT sn-glycerol-3-ph 94.8 2.5 5.5E-05 43.7 18.5 42 190-231 369-412 (452)
129 PRK15402 multidrug efflux syst 94.7 3.6 7.9E-05 41.5 19.1 38 190-228 331-368 (406)
130 PRK10077 xylE D-xylose transpo 94.4 4.6 0.0001 41.5 19.3 41 187-227 383-423 (479)
131 TIGR00897 2A0118 polyol permea 94.4 6.7 0.00015 39.8 20.6 42 190-232 337-379 (402)
132 PTZ00207 hypothetical protein; 94.3 5.8 0.00013 43.6 20.6 60 47-111 50-109 (591)
133 PRK11663 regulatory protein Uh 94.3 3.7 8E-05 42.3 18.3 44 188-231 357-401 (434)
134 PRK09669 putative symporter Ya 94.1 1.4 3E-05 45.5 14.9 44 183-226 334-384 (444)
135 COG2211 MelB Na+/melibiose sym 94.1 1.4 3.1E-05 47.0 14.9 117 58-226 268-392 (467)
136 PRK09556 uhpT sugar phosphate 94.1 4.5 9.8E-05 42.1 18.6 40 190-229 371-411 (467)
137 TIGR00896 CynX cyanate transpo 94.0 3 6.6E-05 41.2 16.4 42 187-228 304-346 (355)
138 TIGR00881 2A0104 phosphoglycer 93.9 1.5 3.3E-05 42.6 13.9 43 186-228 328-370 (379)
139 PF13347 MFS_2: MFS/sugar tran 93.7 0.51 1.1E-05 48.5 10.6 145 28-225 225-379 (428)
140 PRK10504 putative transporter; 93.7 8.6 0.00019 39.6 19.7 43 185-227 370-412 (471)
141 PF05631 DUF791: Protein of un 93.5 10 0.00022 39.1 22.7 225 26-343 31-272 (354)
142 COG2211 MelB Na+/melibiose sym 93.5 12 0.00027 40.0 23.0 183 173-389 117-307 (467)
143 PF11700 ATG22: Vacuole efflux 93.3 13 0.00028 39.7 28.3 82 303-389 269-354 (477)
144 TIGR01272 gluP glucose/galacto 93.1 10 0.00022 37.6 19.8 41 188-228 30-70 (310)
145 PRK15075 citrate-proton sympor 92.9 12 0.00026 38.5 19.3 45 187-231 350-396 (434)
146 PRK08633 2-acyl-glycerophospho 92.9 9.8 0.00021 44.0 20.5 43 186-228 340-382 (1146)
147 TIGR00903 2A0129 major facilit 92.8 11 0.00024 38.3 18.6 47 182-228 294-340 (368)
148 TIGR00902 2A0127 phenyl propri 92.7 12 0.00026 37.6 20.5 42 60-103 239-280 (382)
149 PRK03545 putative arabinose tr 92.7 12 0.00026 37.5 20.9 41 191-232 317-358 (390)
150 TIGR00710 efflux_Bcr_CflA drug 92.6 11 0.00025 36.9 20.1 45 60-106 241-285 (385)
151 PRK11128 putative 3-phenylprop 92.4 13 0.00029 37.3 20.3 39 60-100 239-277 (382)
152 TIGR00882 2A0105 oligosacchari 92.3 13 0.00028 37.5 18.3 41 60-102 253-293 (396)
153 PRK06814 acylglycerophosphoeth 92.3 7.1 0.00015 45.5 18.4 49 180-228 346-394 (1140)
154 PRK10429 melibiose:sodium symp 92.3 4.9 0.00011 42.0 15.6 43 185-227 341-390 (473)
155 TIGR00788 fbt folate/biopterin 92.0 18 0.0004 38.0 22.7 84 305-392 242-326 (468)
156 KOG1330 Sugar transporter/spin 91.9 0.58 1.3E-05 49.8 8.0 162 188-376 141-308 (493)
157 PRK09848 glucuronide transport 91.5 6.3 0.00014 40.6 15.3 43 184-226 335-384 (448)
158 PLN00028 nitrate transmembrane 91.0 3.6 7.8E-05 43.2 13.1 37 187-224 367-403 (476)
159 PRK10091 MFS transport protein 91.0 19 0.0004 36.2 19.0 41 60-102 234-274 (382)
160 PRK10642 proline/glycine betai 90.7 24 0.00052 37.0 20.4 42 187-228 361-402 (490)
161 TIGR00711 efflux_EmrB drug res 90.5 6 0.00013 40.6 13.9 37 190-226 370-406 (485)
162 KOG2615 Permease of the major 89.8 22 0.00047 37.6 16.9 127 42-229 47-181 (451)
163 KOG0569 Permease of the major 89.8 15 0.00033 39.5 16.5 174 36-257 278-455 (485)
164 KOG3626 Organic anion transpor 89.0 14 0.00031 41.6 16.0 177 191-385 260-460 (735)
165 PRK15034 nitrate/nitrite trans 88.7 27 0.00058 37.3 17.3 31 71-103 296-326 (462)
166 TIGR00924 yjdL_sub1_fam amino 88.5 32 0.0007 36.2 17.9 56 173-228 386-441 (475)
167 PRK10054 putative transporter; 88.5 18 0.00039 36.8 15.5 44 188-232 318-362 (395)
168 TIGR02332 HpaX 4-hydroxyphenyl 88.4 9.4 0.0002 39.1 13.5 45 187-231 352-397 (412)
169 TIGR00886 2A0108 nitrite extru 87.5 2.3 5.1E-05 41.7 8.1 32 185-217 335-366 (366)
170 TIGR00901 2A0125 AmpG-related 86.6 25 0.00053 34.6 14.9 33 182-214 323-355 (356)
171 COG2270 Permeases of the major 86.3 18 0.00039 38.3 14.0 39 191-229 364-402 (438)
172 PRK11195 lysophospholipid tran 85.9 42 0.00092 34.0 21.4 43 189-231 314-357 (393)
173 TIGR00887 2A0109 phosphate:H+ 85.7 16 0.00035 38.4 13.7 42 187-228 411-452 (502)
174 KOG3764 Vesicular amine transp 85.1 13 0.00029 39.3 12.3 42 308-349 263-304 (464)
175 KOG2325 Predicted transporter/ 84.7 63 0.0014 34.9 24.0 158 22-228 28-189 (488)
176 KOG2816 Predicted transporter 84.6 60 0.0013 34.6 18.2 31 71-103 72-102 (463)
177 PF01770 Folate_carrier: Reduc 84.0 61 0.0013 34.2 29.2 214 188-407 113-344 (412)
178 COG2223 NarK Nitrate/nitrite t 83.8 63 0.0014 34.2 26.0 76 24-101 10-87 (417)
179 PRK14995 methyl viologen resis 83.7 51 0.0011 34.6 16.5 38 187-224 370-407 (495)
180 COG2271 UhpC Sugar phosphate p 83.4 67 0.0014 34.2 25.9 32 193-224 142-173 (448)
181 TIGR00887 2A0109 phosphate:H+ 83.4 63 0.0014 33.9 31.1 41 187-227 134-174 (502)
182 TIGR00712 glpT glycerol-3-phos 83.1 59 0.0013 33.4 16.4 42 190-231 367-410 (438)
183 COG2814 AraJ Arabinose efflux 82.8 66 0.0014 33.7 19.2 64 42-109 229-292 (394)
184 TIGR00788 fbt folate/biopterin 82.8 42 0.0009 35.4 15.3 129 58-231 285-415 (468)
185 PRK11462 putative transporter; 81.9 21 0.00045 37.5 12.5 66 317-382 109-174 (460)
186 PF03092 BT1: BT1 family; Int 80.6 51 0.0011 34.5 14.9 88 304-395 204-296 (433)
187 TIGR00894 2A0114euk Na(+)-depe 79.4 80 0.0017 32.5 15.9 41 187-228 380-420 (465)
188 PRK11652 emrD multidrug resist 78.9 74 0.0016 31.8 18.6 42 186-228 317-358 (394)
189 KOG2532 Permease of the major 78.3 1E+02 0.0022 33.0 23.3 152 192-364 152-307 (466)
190 PRK10473 multidrug efflux syst 75.9 89 0.0019 31.2 21.6 39 62-102 240-278 (392)
191 PRK11102 bicyclomycin/multidru 74.7 90 0.002 30.7 19.0 41 60-102 229-269 (377)
192 PRK11043 putative transporter; 73.4 1E+02 0.0022 30.8 19.9 39 189-228 317-355 (401)
193 KOG2504 Monocarboxylate transp 72.8 75 0.0016 34.3 13.8 38 191-228 411-448 (509)
194 PRK11646 multidrug resistance 71.5 1.2E+02 0.0026 30.8 19.1 41 188-228 317-357 (400)
195 TIGR00880 2_A_01_02 Multidrug 70.9 53 0.0012 26.4 11.2 68 323-391 57-124 (141)
196 COG2270 Permeases of the major 69.4 1.6E+02 0.0035 31.4 18.8 113 43-205 39-152 (438)
197 PRK10213 nepI ribonucleoside t 68.8 1.4E+02 0.003 30.3 20.7 32 59-92 250-281 (394)
198 COG3104 PTR2 Dipeptide/tripept 67.8 94 0.002 33.7 12.9 63 192-255 141-207 (498)
199 PRK10263 DNA translocase FtsK; 64.9 1.3E+02 0.0028 36.4 14.3 14 215-228 142-155 (1355)
200 PF06609 TRI12: Fungal trichot 63.4 2.4E+02 0.0053 31.3 28.1 89 10-100 15-115 (599)
201 PF12832 MFS_1_like: MFS_1 lik 59.0 43 0.00093 26.6 6.6 71 31-103 3-75 (77)
202 PF01306 LacY_symp: LacY proto 57.2 2.6E+02 0.0056 29.5 22.3 145 188-394 242-389 (412)
203 PF06123 CreD: Inner membrane 56.3 2.5E+02 0.0053 29.9 13.5 48 66-117 298-345 (430)
204 KOG0255 Synaptic vesicle trans 53.0 3E+02 0.0064 28.9 18.4 103 71-228 128-230 (521)
205 PRK10207 dipeptide/tripeptide 49.3 54 0.0012 34.9 7.4 54 339-392 127-181 (489)
206 KOG0569 Permease of the major 45.7 4.2E+02 0.0092 28.6 15.5 41 348-388 145-188 (485)
207 PF03137 OATP: Organic Anion T 43.8 7.7 0.00017 42.1 0.0 81 302-386 292-374 (539)
208 PF03825 Nuc_H_symport: Nucleo 43.3 4E+02 0.0086 27.6 19.5 44 66-111 248-291 (400)
209 PRK11383 hypothetical protein; 42.3 2.6E+02 0.0056 25.3 9.3 77 18-100 30-110 (145)
210 TIGR01272 gluP glucose/galacto 41.3 3.6E+02 0.0078 26.5 17.4 47 183-231 245-292 (310)
211 PRK03612 spermidine synthase; 39.9 5.2E+02 0.011 28.0 19.6 32 201-232 142-175 (521)
212 PF13150 DUF3989: Protein of u 39.8 48 0.001 27.3 4.1 42 11-52 10-52 (85)
213 PF05360 YiaAB: yiaA/B two hel 36.8 48 0.001 24.7 3.4 35 18-52 19-53 (53)
214 PF03092 BT1: BT1 family; Int 35.9 5.3E+02 0.011 26.9 12.4 36 193-228 343-378 (433)
215 PRK10983 putative inner membra 35.3 1.8E+02 0.004 30.0 8.5 57 31-102 15-71 (368)
216 KOG0254 Predicted transporter 29.7 6.9E+02 0.015 26.3 12.6 146 27-213 293-440 (513)
217 KOG3810 Micronutrient transpor 28.3 5.8E+02 0.013 27.0 10.5 170 192-387 118-305 (433)
218 PF02313 Fumarate_red_D: Fumar 28.1 73 0.0016 27.9 3.5 33 194-226 2-34 (118)
219 PRK15403 multidrug efflux syst 28.0 6.5E+02 0.014 25.6 20.9 38 59-98 252-289 (413)
220 TIGR02871 spore_ylbJ sporulati 26.8 3.8E+02 0.0082 27.9 9.1 21 316-336 202-222 (362)
221 PHA01159 hypothetical protein 24.6 4E+02 0.0087 23.2 7.3 81 303-383 32-114 (114)
222 KOG1134 Uncharacterized conser 24.0 2.3E+02 0.005 32.3 7.4 85 315-399 556-653 (728)
223 PRK11715 inner membrane protei 23.4 9.3E+02 0.02 25.7 14.4 47 67-117 305-351 (436)
224 KOG0253 Synaptic vesicle trans 22.6 9.9E+02 0.021 25.8 18.9 39 62-102 114-152 (528)
225 PF04341 DUF485: Protein of un 22.5 3.8E+02 0.0082 21.9 6.7 62 29-92 17-83 (91)
226 PF04995 CcmD: Heme exporter p 21.6 1.2E+02 0.0026 21.7 3.1 27 173-200 4-30 (46)
No 1
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=100.00 E-value=2.9e-65 Score=532.76 Aligned_cols=326 Identities=15% Similarity=0.160 Sum_probs=271.2
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcc---cCcCchhhHHHHH-HHHHHHHHHHHHHHhcCCCCCchhHHH
Q 014982 22 LHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS---LGLSKLPGLFVGS-LILTLIAAPVSTLIFSLPNLSKAKALV 97 (415)
Q Consensus 22 i~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs---~Gae~LP~l~~~t-~~~~ll~~~lys~L~~~~r~sr~rl~~ 97 (415)
|||+|.+|++|+++++||++++|+++||+||+++++ .|+|+|||+|+++ +|++++++++|+|++| |+||+|+++
T Consensus 1 ~~~~E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~--~~~~~~lf~ 78 (472)
T TIGR00769 1 IEVHELKKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSN--ILSKEALFY 78 (472)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHhHH
Confidence 699999999999999999999999999999999996 5999999999977 7788888999999999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHH
Q 014982 98 LIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLW 177 (415)
Q Consensus 98 ~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw 177 (415)
+++++|++++++|++++++..+.+|| +..+|.++...|++..+. .-+.++|+++ +||+|
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p----------------~~~~~~~~~~~~~~~~~~-i~~~~~W~~~----~FYv~ 137 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHP----------------TALADKLLSLLPPGFMGF-IAILRIWSFA----LFYVM 137 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCC----------------cHHHHHHHhhcchhhHHH-HHHHhhhhHH----HHHHH
Confidence 99999999999999999988544443 333444444443233222 1125899998 89999
Q ss_pred HHHHHHHHHH-HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH--------HhH------HHHHHHHHHH
Q 014982 178 VALLNLITIS-STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF--------LGP------YLLLFAACLM 242 (415)
Q Consensus 178 ~~vfnl~~~s-lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~--------~g~------~Lllvaa~ll 242 (415)
.|+||++++| +||+++||+|+.|||||+||++++|||+|+++||.++.+++. .++ +++.++++++
T Consensus 138 ~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~ 217 (472)
T TIGR00769 138 AELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSG 217 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999999999999999998862 122 2455555555
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHH
Q 014982 243 ELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSL 322 (415)
Q Consensus 243 ~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~ 322 (415)
++++.+.+++.|+... +|+.. +.. + .++|+++|+|+.||+|+++|||||++||+
T Consensus 218 ~~~~~~~~~l~~~~~~-------------~~~~~-~~~-----------~-~~~k~k~k~~~~es~k~i~~S~yL~~ia~ 271 (472)
T TIGR00769 218 LAIILLYWWVNRNVLT-------------DPRSY-NPA-----------L-KEKKVKPKMSTMESLKFLVSSPYILDLAL 271 (472)
T ss_pred HHHHHHHHHHHhcccC-------------Ccccc-chh-----------h-ccccCCCCCCHHHHHHHHHhCHHHHHHHH
Confidence 6666666666554321 22111 100 0 01233448999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHHHHHHHHH
Q 014982 323 FLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYLMFYLLVT 396 (415)
Q Consensus 323 ~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~m~~~~~~ 396 (415)
++++|++++|++|++||+++++.|||++||++|||+++.++|++|+++|++.++++||+||+.+..++|.....
T Consensus 272 ~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 272 LVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999994489999999999999976655
No 2
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=100.00 E-value=1.3e-62 Score=515.07 Aligned_cols=338 Identities=16% Similarity=0.246 Sum_probs=285.5
Q ss_pred hcchhhHHHHhhcccCcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-cCcCchhhHHH-HHHHHHHHHHHHHHHHh
Q 014982 8 SKSRLDAFASVFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSKLPGLFV-GSLILTLIAAPVSTLIF 85 (415)
Q Consensus 8 ~~~~~~~~~~~~~~i~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~Gae~LP~l~~-~t~~~~ll~~~lys~L~ 85 (415)
++++..++++++|||+++|.+|++|+.+++|||+++|.++|++||+++++ .|+|.+||+|+ +.+|++++++.+|+|++
T Consensus 4 ~~~~~~~~~~~~~pi~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~ 83 (491)
T PF03219_consen 4 SEKEFSKLRSIFWPIHRSELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLS 83 (491)
T ss_pred chhhHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35688899999999999999999999999999999999999999999999 89999999999 67999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCcccc---c
Q 014982 86 SLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWG---D 162 (415)
Q Consensus 86 ~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~---~ 162 (415)
| +++|+|+|+++..+|+.++.+|+++++|+.+..||+++..+ ++.. .++++ +|. .
T Consensus 84 n--~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~----------------~~~~---~~~~~-~~~i~~~ 141 (491)
T PF03219_consen 84 N--RLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADK----------------LLAI---LPPGF-KGFIAMF 141 (491)
T ss_pred h--cCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHH----------------hhhh---ccchH-HHHHHHH
Confidence 9 99999999999999999999999999987655555543333 2222 24454 453 5
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHH-HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH-H--------hH
Q 014982 163 HGWFYVSVRMGFFLWVALLNLITIS-STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-L--------GP 232 (415)
Q Consensus 163 ~~W~y~~~~~~FYiw~~vfnl~~~s-lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~-~--------g~ 232 (415)
|||+|+ +||++.|+|+.+++| +||+++||+++.|||||+||++++|||+|+++||.++.+++. . ++
T Consensus 142 ~~Wt~s----lfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~ 217 (491)
T PF03219_consen 142 RNWTFS----LFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDA 217 (491)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence 999999 899999999888888 899999999999999999999999999999999999998875 1 12
Q ss_pred H---HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHH
Q 014982 233 Y---LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLR 309 (415)
Q Consensus 233 ~---Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~ 309 (415)
+ +..+ ...+.+++.++..+++++++++. + +++.. +. +++++||++|.++.||+|
T Consensus 218 ~~~~l~~l-~~~v~~~g~~i~~~~~~~~~~vl-------~--~~~~~--~~-----------~~~~kk~k~k~s~~es~k 274 (491)
T PF03219_consen 218 WELSLNSL-MGIVLILGIVIILLYRYMNKNVL-------T--DPRFY--PS-----------AKKKKKKKPKMSLKESFK 274 (491)
T ss_pred HhHHHHHH-HHHHHHHHHHHHHHHHHHHHHcc-------C--ccccc--hh-----------hhcccccCCCccHHHHHH
Confidence 2 2222 22334566677788888887652 1 11111 00 111345667889999999
Q ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHH
Q 014982 310 LIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYL 389 (415)
Q Consensus 310 ~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~ 389 (415)
+++|||||++||+++++|++++|++|++||+++++.|||++|+++|||.+++++|++|+++|++.+.++||+||+.+..+
T Consensus 275 ~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 275 LLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALI 354 (491)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999554448999999999999
Q ss_pred HHHHH
Q 014982 390 MFYLL 394 (415)
Q Consensus 390 m~~~~ 394 (415)
.|..+
T Consensus 355 tPiv~ 359 (491)
T PF03219_consen 355 TPIVI 359 (491)
T ss_pred hHHHH
Confidence 88544
No 3
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=100.00 E-value=1.2e-60 Score=491.09 Aligned_cols=341 Identities=16% Similarity=0.171 Sum_probs=293.8
Q ss_pred hhhhcchhhHHHHhhcccCcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-cCcCchhhHHHH-HHHHHHHHHHHHH
Q 014982 5 RIISKSRLDAFASVFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSKLPGLFVG-SLILTLIAAPVST 82 (415)
Q Consensus 5 ~~~~~~~~~~~~~~~~~i~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~Gae~LP~l~~~-t~~~~ll~~~lys 82 (415)
..-.+++.+++++++||||++|.+|++|+++++|||+++|+++|++||+++++ .|+|.+||+|++ .+|++++++++|+
T Consensus 4 ~~~~~~~~~k~~~~~wpi~r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~ 83 (509)
T COG3202 4 TSEEEKYFSKLRSRLWPIRRYELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQ 83 (509)
T ss_pred CcccccccccchheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHH
Confidence 33455788899999999999999999999999999999999999999999999 899999999995 4899999999999
Q ss_pred HHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCC-CCcccc
Q 014982 83 LIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTA-NSADWG 161 (415)
Q Consensus 83 ~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~ 161 (415)
|++| +++++|+|++++++|+.++++|+++++|..+.+||+||+.++..++ .| ++ +|+
T Consensus 84 kl~~--~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~-------------------~p~~l-~~~ 141 (509)
T COG3202 84 KLLN--ILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFAD-------------------LPMFL-KWF 141 (509)
T ss_pred HHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhh-------------------CCccc-eee
Confidence 9999 9999999999999999999999999999988899999998888763 33 54 786
Q ss_pred ---ccccchhhhhHHHHHHHHHHHHHHHH-HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH-H----h-
Q 014982 162 ---DHGWFYVSVRMGFFLWVALLNLITIS-STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-L----G- 231 (415)
Q Consensus 162 ---~~~W~y~~~~~~FYiw~~vfnl~~~s-lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~-~----g- 231 (415)
.++|+|+ +||++.|+|+.+++| +|||||||++++|||||+||+++.|+|+|.+++|.++.++.. . .
T Consensus 142 ili~~~Ws~s----~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~ 217 (509)
T COG3202 142 ILIVGEWSYS----LFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASE 217 (509)
T ss_pred eEeecchHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHH
Confidence 5999998 899999999888888 999999999999999999999999999999999999998861 1 1
Q ss_pred -HHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHH
Q 014982 232 -PYLLL-FAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLR 309 (415)
Q Consensus 232 -~~Lll-vaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~ 309 (415)
..+++ .-..++.+++..+..++|+++|.+. + +|....+ +++++++++.|.++.||++
T Consensus 218 ~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il-------~--~~~f~~~------------~~~kk~~~k~k~~~~~s~k 276 (509)
T COG3202 218 FKDLLLQILFIVIVILGIIAILLYRYINRNVL-------T--DPLFYLR------------AKKKKKKKKLKLGLIESFK 276 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-------c--CcchhHH------------HhcccccccccCcHHHHHH
Confidence 12221 1123333455666677888887642 1 2222200 1122346677899999999
Q ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHhcHHHHHH
Q 014982 310 LIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRLGFAMFFY 388 (415)
Q Consensus 310 ~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrlG~~~~l~ 388 (415)
++.|||||++|++++++|++++|++|.+||+++++.||+++|+++|||+++.+||+++++++++.++ ++||.||..+-.
T Consensus 277 ~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~Al 356 (509)
T COG3202 277 MILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGAL 356 (509)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999877
Q ss_pred HHHH
Q 014982 389 LMFY 392 (415)
Q Consensus 389 ~m~~ 392 (415)
+-|+
T Consensus 357 itPi 360 (509)
T COG3202 357 ITPL 360 (509)
T ss_pred HHHH
Confidence 6663
No 4
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.93 E-value=5.2e-06 Score=80.94 Aligned_cols=247 Identities=13% Similarity=0.063 Sum_probs=139.5
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccc
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSS 139 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (415)
.+++.++.........+..++.+++.| |++|||.+........+..++..+. ...+
T Consensus 33 ~~~~g~~~~~~~~~~~i~~~~~G~l~d--r~g~r~~~~~~~~~~~~~~~~~~~~--~~~~-------------------- 88 (365)
T TIGR00900 33 ASVLSLAALAGMLPYVVLSPIAGALAD--RYDRKKVMIGADLIRAVLVAVLPFV--ALLG-------------------- 88 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHH--hhchhHHHHHHHHHHHHHHHHHHHH--HHcC--------------------
Confidence 345666666667778888999999999 9999998876554433322222211 1100
Q ss_pred cccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHH
Q 014982 140 NAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLF 219 (415)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~ 219 (415)
+. + .| ... +..+...+.+-.......+.+.|.++.+|-.|.+++...+.++|.++
T Consensus 89 ----~~----------~--~~-----~~~----~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 143 (365)
T TIGR00900 89 ----GL----------N--IW-----QVY----VLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIV 143 (365)
T ss_pred ----CC----------c--HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHH
Confidence 00 0 12 111 22223344444455567788999999999999999999999999999
Q ss_pred hHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014982 220 GSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIV 297 (415)
Q Consensus 220 Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (415)
|+.+...+. ..|. +...+.++...++......+ + .++ .+ ++ + ++ +.+
T Consensus 144 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~--~~~---------~~-~~--~--~~--------------~~~ 192 (365)
T TIGR00900 144 GPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV-R--IPE---------LA-AS--E--IQ--------------ALS 192 (365)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc-c--ccc---------CC-Cc--c--cc--------------ccc
Confidence 999888776 4553 33322232222232222211 1 000 00 00 0 00 000
Q ss_pred cCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 298 KPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFY-FQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY 376 (415)
Q Consensus 298 k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~-f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~ 376 (415)
++...+..++++.++++|.+..+.+...++........ .......++.+..+++. .|.+....++.+++.+++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 269 (365)
T TIGR00900 193 NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTH---YGWVLAAFGLGALLGALLLGL 269 (365)
T ss_pred hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 01122457788999999999888877777666554444 22222233333322222 244555566666666666554
Q ss_pred HHhHhcHHHHHHH
Q 014982 377 AACRLGFAMFFYL 389 (415)
Q Consensus 377 iirrlG~~~~l~~ 389 (415)
+.+|.|-+..+..
T Consensus 270 l~~~~~~~~~~~~ 282 (365)
T TIGR00900 270 LGRYFKRMALMTG 282 (365)
T ss_pred HHHHhchhHHHHH
Confidence 6788887766543
No 5
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.85 E-value=7.5e-06 Score=83.49 Aligned_cols=264 Identities=14% Similarity=0.063 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHH
Q 014982 32 HSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLV 109 (415)
Q Consensus 32 ~~~l~~F~Il~~y~iLRpirDsl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~ 109 (415)
..++-.|+..++..+....--.+.-+. +.+.+.++..+......+..|+.|++.| |++|||++.+....+.+..++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laD--r~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFAD--SFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhh--ccCCchhhHHHHHHHHHHHHH
Confidence 334445555554444444333333232 3556778777778888999999999999 999999998877766443333
Q ss_pred HHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 014982 110 FFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 189 (415)
Q Consensus 110 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slF 189 (415)
+.+ ... .. +.+....+..-+....-
T Consensus 85 ~~~--~~~-----------------------------------------~~------------~~r~l~G~~~a~~~pa~ 109 (393)
T PRK11195 85 MLF--GIH-----------------------------------------PL------------LAYGLVGIGAAAYSPAK 109 (393)
T ss_pred HHH--HHH-----------------------------------------HH------------HHHHHHHHHHHHHHHHH
Confidence 211 100 00 12233344444455566
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRK 268 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~ 268 (415)
-+.+.|+++.||=.|..++.+.+.++|.++|+.++..+..... ..+.+.+.+..++..+. ...++.
T Consensus 110 ~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~----~~l~~~--------- 176 (393)
T PRK11195 110 YGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFN----LFIPRL--------- 176 (393)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCC---------
Confidence 7789999999999999999999999999999999887763332 12222121111222211 112111
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 014982 269 ADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSS 348 (415)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d 348 (415)
. ++ +. .. + .+.++...+.+++.+.++++|++........+.......+.+.....+++.+..
T Consensus 177 ~--~~-~~--~~-----------~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 238 (393)
T PRK11195 177 G--AR-RP--GQ-----------S--WNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGI 238 (393)
T ss_pred c--cc-cc--cc-----------C--CCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 00 00 00 0 000111124567888999999987655554444444444444333344444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHH
Q 014982 349 SLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMF 386 (415)
Q Consensus 349 ~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~ 386 (415)
++.. .|.+....++..++-.++...+.+|.|-+..
T Consensus 239 s~~~---~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~ 273 (393)
T PRK11195 239 TLNQ---PAYLQAVVAIGIAVGAGAAARLVTLETVLRV 273 (393)
T ss_pred ChhH---HHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Confidence 2222 5666666666666666665545666665543
No 6
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.76 E-value=3.9e-05 Score=77.76 Aligned_cols=148 Identities=12% Similarity=0.080 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 014982 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (415)
Q Consensus 30 ~l~~~l~~F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~l 107 (415)
.+...++-|+...+.....|.-..+.-+.| .+.+.+...+......+..++.+++.+ |++|||++......+.+..
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~d--r~g~r~~l~~~~~~~~~~~ 92 (406)
T PRK15402 15 PLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSD--RIGRRPVMLAGVAFFILTC 92 (406)
T ss_pred HHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHH
Confidence 333334444444556666666554433333 455666666667778888899999999 9999998765544443332
Q ss_pred HHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 014982 108 LVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 187 (415)
Q Consensus 108 l~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~s 187 (415)
+.+.. .. + .| ... +......+-.-....
T Consensus 93 ~~~~~----~~-----~----------------------------------~~-----~l~----~~~~l~G~~~~~~~~ 120 (406)
T PRK15402 93 LAILL----AQ-----S----------------------------------IE-----QFT----LLRFLQGIGLCFIGA 120 (406)
T ss_pred HHHHH----Hc-----c----------------------------------HH-----HHH----HHHHHHHhHhhhHHH
Confidence 22211 10 0 11 000 111222221122233
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
..+..+.|.++.++..|..++...++.+|..+|+.++..+. ..|
T Consensus 121 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 121 VGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 56778899999999889999999888899999998877765 344
No 7
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.75 E-value=5.2e-06 Score=84.76 Aligned_cols=76 Identities=17% Similarity=0.136 Sum_probs=51.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-c--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 26 ETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-L--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 26 E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
+.+.+..+.+..|+..+++...-|.--.-..+ . +..++..+.........+..++.|++.| |++|||.+.+....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~D--r~g~r~~~~~~~~~ 85 (420)
T PRK09528 8 KNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISD--KLGLKKHLLWIISG 85 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHHH
Confidence 33455556566666666666655553332222 2 3555667777778889999999999999 99999998765444
Q ss_pred H
Q 014982 103 F 103 (415)
Q Consensus 103 F 103 (415)
+
T Consensus 86 ~ 86 (420)
T PRK09528 86 L 86 (420)
T ss_pred H
Confidence 3
No 8
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.74 E-value=6.1e-06 Score=80.20 Aligned_cols=143 Identities=19% Similarity=0.322 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhhhhhh-hhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 014982 35 SCFFFILSAYFVVLPLRD-EGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFF 111 (415)
Q Consensus 35 l~~F~Il~~y~iLRpirD-sl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~ 111 (415)
+..|+...+..+.-|.-. .+.-+. ..+++.++.........+..++.+++.| |++|||++......+++..++..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSD--RFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHH--HS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCeeeEeehhhhhhhHHHHhh
Confidence 344555555555555544 332233 3556777777778889999999999999 99999977665555544422211
Q ss_pred HHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 014982 112 LLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 191 (415)
Q Consensus 112 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWs 191 (415)
+..+ .| .+. +..+...+.+-......-.
T Consensus 81 --~~~~-----------------------------------------~~-----~~~----~~~~l~g~~~~~~~~~~~~ 108 (352)
T PF07690_consen 81 --FASN-----------------------------------------FW-----LLL----IARFLLGIGSGFFSPASNA 108 (352)
T ss_dssp --HHCC-----------------------------------------HH-----HHH----HHHHHHHHHHHHHHHHHHH
T ss_pred --hhhh-----------------------------------------HH-----HHh----hhccccccccccccccccc
Confidence 1111 12 111 2333334443445556777
Q ss_pred HHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 192 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 192 fandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.+.|.++.||-.|.+++...+.++|.++|+.++..+. ..|
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 109 LIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred cccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 8999999999999999999999999999999988776 445
No 9
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.74 E-value=5.3e-05 Score=74.99 Aligned_cols=256 Identities=15% Similarity=0.034 Sum_probs=134.8
Q ss_pred HHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 014982 38 FFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQ 115 (415)
Q Consensus 38 F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~ 115 (415)
+....+.....|.-+.+.-+.| .++..++.........+..++.+++.+ |++|||.+......+.+..+.. .
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d--~~g~r~~~~~~~~~~~~~~~~~----~ 88 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSD--RYGRRPVLLLGLFIFALSSLGL----A 88 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH--hcCChHHHHHHHHHHHHHHHHH----H
Confidence 3334556666665544433333 455666666667778888999999999 9999998765443332222221 1
Q ss_pred hhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 014982 116 SSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVID 195 (415)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfand 195 (415)
... + .| .+. +..+...+..-......-..+.|
T Consensus 89 ~~~--------------------------~-------------~~-----~~~----~~~~l~g~~~~~~~~~~~~~~~~ 120 (385)
T TIGR00710 89 LSN--------------------------N-------------IE-----TLL----VLRFVQAFGASAGSVISQALVRD 120 (385)
T ss_pred HHc--------------------------c-------------HH-----HHH----HHHHHHHcchhHHHHHHHHHHHH
Confidence 111 0 11 111 11122222222233345567899
Q ss_pred hcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCC
Q 014982 196 VMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDP 273 (415)
Q Consensus 196 if~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 273 (415)
.++.+|-.|.+++..++.++|.++|+.+...+. ..|. ....+.+++..++....... ..+. ++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------~~ 185 (385)
T TIGR00710 121 IYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFI---LPET------------LP 185 (385)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh---CCCC------------CC
Confidence 999888889999999999999999998887765 4453 22222222222222222211 1110 00
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcC-CHHH
Q 014982 274 RSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVS-SFFYFQKVTVIAMTVS-SSLG 351 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~-tlv~f~~~~~v~~~~~-d~~~ 351 (415)
. ++ ++......+.++.++++|.+....+...+..... ....+ .....++.+. |+++
T Consensus 186 --~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~ 243 (385)
T TIGR00710 186 --Y--EA-----------------RIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSG-APFVYIDIMGVSPSV 243 (385)
T ss_pred --C--cc-----------------cCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHc-ChHHHHHHcCCCHHH
Confidence 0 00 0001123556777888887766554433322211 11111 1112333333 3322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHH
Q 014982 352 RRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFY 388 (415)
Q Consensus 352 ~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~ 388 (415)
.|.+....++..++.+.+...+.+|+|-+..+.
T Consensus 244 ----~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 244 ----FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR 276 (385)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 344555566667777777665788999877654
No 10
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.72 E-value=0.0001 Score=74.04 Aligned_cols=145 Identities=16% Similarity=0.198 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcccCcCc-------hhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHH
Q 014982 32 HSSSCFFFILSAYFVVLPLRDEGAISLGLSK-------LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (415)
Q Consensus 32 ~~~l~~F~Il~~y~iLRpirDsl~vs~Gae~-------LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~ 104 (415)
.+.+..|+...++.+..|.=....-+.|.+. ...+.........+..++.+++.| |++|++.+........
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLAD--RKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhCcHHHHHHHHHHHH
Confidence 3345567777788777776665554444332 233444556777888999999999 9999988765443332
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHH
Q 014982 105 VSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLI 184 (415)
Q Consensus 105 ~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~ 184 (415)
+..+++. ... + .| .+. +..+...+.+-+
T Consensus 96 ~~~~~~~----~~~--------------------------~-------------~~-----~~~----~~~~~~g~~~~~ 123 (408)
T PRK09874 96 IVMVLMG----LAQ--------------------------N-------------IW-----QFL----ILRALLGLLGGF 123 (408)
T ss_pred HHHHHHH----HHh--------------------------h-------------HH-----HHH----HHHHHHHHhhhh
Confidence 2222111 110 0 11 011 122222222221
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.....+.++|.++.+|-.+..++...+.++|.++|+.+...+. ..|
T Consensus 124 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 170 (408)
T PRK09874 124 -VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG 170 (408)
T ss_pred -HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2344567788888877777889999999999999998887765 445
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=98.68 E-value=0.00012 Score=73.89 Aligned_cols=149 Identities=17% Similarity=0.147 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 014982 30 LLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (415)
Q Consensus 30 ~l~~~l~~F~Il~~y~iLRpirDsl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~l 107 (415)
++...+..|+...+.++.-|+-+.+.-+. ..++..++.........+..++.+++.+ |++|||++......+.+..
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~ 88 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTS--NVERRKLLIGLFVLFIASH 88 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCChHHHHHHHHHHHHHHH
Confidence 33444444444344444444333333332 3555666555556666777888999999 9999999877654443333
Q ss_pred HHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 014982 108 LVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 187 (415)
Q Consensus 108 l~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~s 187 (415)
+.+.+ ..+ .| .+. +......+-.-....
T Consensus 89 ~~~~~--~~~-----------------------------------------~~-----~l~----~~r~~~G~~~~~~~~ 116 (390)
T PRK03545 89 VLSAL--AWN-----------------------------------------FT-----VLL----ISRIGIAFAHAIFWS 116 (390)
T ss_pred HHHHH--hcc-----------------------------------------HH-----HHH----HHHHHHHHHHHHHHH
Confidence 22211 110 12 110 111122222112222
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.--...+|.++.||-.|..|+.+.|.++|..+|+.+...+. ..|.
T Consensus 117 ~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw 162 (390)
T PRK03545 117 ITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW 162 (390)
T ss_pred HHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH
Confidence 33467889999888889999999999999999999887775 4563
No 12
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.67 E-value=2.1e-05 Score=79.52 Aligned_cols=280 Identities=13% Similarity=0.079 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcc-cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHH
Q 014982 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (415)
Q Consensus 30 ~l~~~l~~F~Il~~y~iLRpirDsl~vs-~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ 106 (415)
++.+....|+...++...-|.=.....+ .| ..+...+.....+...+..++.+++.| |+.|||.+......+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~D--r~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISD--KLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHH
Confidence 3344455677777777777754333332 23 444555666668888999999999999 999999987655444332
Q ss_pred HHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHH
Q 014982 107 LLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 186 (415)
Q Consensus 107 ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~ 186 (415)
...+......... .. + .+. .+.+ ..+..-+..
T Consensus 82 ~~~~~~~~~~~~~------------~~-----------~-------------~~~-----------~~~~-~~~~~g~~~ 113 (396)
T TIGR00882 82 FAPFFIYVFGPLL------------QS-----------N-------------ILV-----------GAIV-GGLYLGFVF 113 (396)
T ss_pred HHHHHHHHhhhHH------------HH-----------H-------------HHH-----------HHHH-HHHHHHHHh
Confidence 2222111110000 00 0 000 0111 011101111
Q ss_pred HHHHHHHHhhcCc--cchhHHHHHHHHHHhHHHHHhHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 014982 187 SSTWARVIDVMDS--ESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEEL 263 (415)
Q Consensus 187 slFWsfandif~~--~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~ 263 (415)
......+++..+. ++-++-||....++++|..+|+.++..+...+. ....+.+++..+...+.... .++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~---~~~~---- 186 (396)
T TIGR00882 114 SAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFA---KPKA---- 186 (396)
T ss_pred ccchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHh---CCCC----
Confidence 1112223333321 111247899999999999999988777665553 22222222222222222111 1110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 264 PPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIA 343 (415)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~ 343 (415)
+ ++++.+++. + .+ + +++ + .+.++.++|+|.++.++...++.....+..+.......+
T Consensus 187 -----~--~~~~~~~~~-----~----~~--~-~~~---~-~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~ 243 (396)
T TIGR00882 187 -----P--SSATVANAL-----G----AN--A-SAF---S-LKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFT 243 (396)
T ss_pred -----c--hhhhhhccc-----c----cc--c-CCC---C-HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000 0 00 0 011 1 223567788888776666666666666666555555555
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHH
Q 014982 344 MTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYL 389 (415)
Q Consensus 344 ~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~ 389 (415)
+.+.++..-+...|......++...+.+.+...+.+|+|-+..+.+
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~ 289 (396)
T TIGR00882 244 SFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLI 289 (396)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 5553322223345666667777777777776668999998887644
No 13
>PRK10054 putative transporter; Provisional
Probab=98.66 E-value=3.1e-05 Score=79.04 Aligned_cols=152 Identities=11% Similarity=0.062 Sum_probs=94.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 26 ETSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 26 E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
|-|.+.......||...+++..-|.=-....+ .| .++.-++........++..++.+++.| |+.|++++......
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D--r~g~k~~~~~~~~~ 82 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILAD--KFDKKRYMLLAITA 82 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCcchhHHHHHHH
Confidence 33445555566777787877766643333322 34 445666666656778888999999999 99999877554433
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHH
Q 014982 103 FSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLN 182 (415)
Q Consensus 103 F~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfn 182 (415)
+.+..+.+ .+.. + .| ... ..+.+....+.
T Consensus 83 ~~~~~~~~----~~~~--------------------------~-------------~~-----~~~---~~~~~~g~~~~ 111 (395)
T PRK10054 83 FASGFIAI----PLVN--------------------------N-------------VT-----LVV---LFFALINCAYS 111 (395)
T ss_pred HHHHHHHH----HHHh--------------------------H-------------HH-----HHH---HHHHHHHHHHH
Confidence 32222221 1110 0 11 111 01222222222
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHh
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLG 231 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g 231 (415)
......++..+|.++.++..|.+++...+.++|..+|+.+...+...|
T Consensus 112 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g 159 (395)
T PRK10054 112 -VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQS 159 (395)
T ss_pred -HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223456788899999888889999999999999999998888776545
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.63 E-value=3e-05 Score=75.71 Aligned_cols=260 Identities=8% Similarity=-0.018 Sum_probs=135.3
Q ss_pred hhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhh
Q 014982 50 LRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVS 129 (415)
Q Consensus 50 irDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~ 129 (415)
++|.+.+ ..++..++.........+..++.+++.+ |++|||.+......+.+..+++.+ ..+
T Consensus 20 ~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~r~~~~~~~~~~~~~~~~~~~--~~~------------ 81 (399)
T TIGR00893 20 LQEDLGL--SAAQYGYVFSAFSWGYVVGQFPGGWLLD--RFGARKTLAVFIVIWGVFTGLQAF--AGA------------ 81 (399)
T ss_pred HHHhhCC--ChhhHHHHHHHHHHHHHHHHHhHHHHHH--hcCcceeeHHHHHHHHHHHHHHHH--HcC------------
Confidence 3444433 3455667666667778888999999999 999999876544433222222211 100
Q ss_pred hhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 014982 130 HLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFI 209 (415)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli 209 (415)
.| .+. +..+...+..-......-..+.|.++.+|-.+.+++.
T Consensus 82 -----------------------------~~-----~~~----~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 123 (399)
T TIGR00893 82 -----------------------------YV-----SLY----ILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIF 123 (399)
T ss_pred -----------------------------HH-----HHH----HHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHH
Confidence 11 111 2222233333334445667889999988888999999
Q ss_pred HHHHhHHHHHhHHHHHHHH-HHhH-HH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014982 210 GAGATLGQLFGSLFAAGMA-FLGP-YL-LLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAK 286 (415)
Q Consensus 210 ~aGg~lG~I~Gg~l~~~la-~~g~-~L-llvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (415)
..+.++|.++|+.+...+. ..|. +. ...+++.+ +.........+..+++ ....++++.++..+ +
T Consensus 124 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~----~ 190 (399)
T TIGR00893 124 NSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGI-IWGVLWLKFIPDPPQK--------AKWLTEEEKYIVVG----G 190 (399)
T ss_pred HHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH-HHHHHhhheecCCCCc--------cccCCHHHHhhcch----h
Confidence 9999999999998887665 4452 32 22222222 2222221111111100 00000000000000 0
Q ss_pred CCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q 014982 287 VPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVF 366 (415)
Q Consensus 287 ~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~ 366 (415)
...+.++ ++.+....++.+.++++|.+..+++...++....+....-....+++.+..+++.. |.+....++.
T Consensus 191 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 263 (399)
T TIGR00893 191 LLAEQQG----KGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEA---GFMASLPGIV 263 (399)
T ss_pred hcccccc----ccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHh---hHHHHHHHHH
Confidence 0000000 00011223456778888888887777777766666555544445555544333333 3334444555
Q ss_pred HHHHHHHHHHHHhHhcHHH
Q 014982 367 ILAGQLTLTYAACRLGFAM 385 (415)
Q Consensus 367 tl~~qlf~t~iirrlG~~~ 385 (415)
.++.+.+...+.+|+|-+.
T Consensus 264 ~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 264 GFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 5556665554667777663
No 15
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.63 E-value=3.4e-05 Score=80.35 Aligned_cols=296 Identities=17% Similarity=0.197 Sum_probs=174.2
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhhhh-----hhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHH
Q 014982 24 PHETSALLHSSSCFFFILSAYFVVLPL-----RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVL 98 (415)
Q Consensus 24 ~~E~~~~l~~~l~~F~Il~~y~iLRpi-----rDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~ 98 (415)
+++.+...+..+.+|+-.+.+.+.-|. .|..++ ..+++-.++-.....++++.|+||.+.+ |+..+|-.-+
T Consensus 3 ~~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GL--s~~~iG~i~s~~~~~~l~~qp~~G~i~D--klg~kK~Ll~ 78 (412)
T PF01306_consen 3 YFKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGL--SGTEIGIIFSAGSLFALLAQPVYGFISD--KLGLKKHLLW 78 (412)
T ss_dssp CCHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTHHHHHHHHH--HCTTCSHHHH
T ss_pred CccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCC--CHHHHHHHHHHHHHHHHHHHHhHHHhcc--hhhhhHHHHH
Confidence 556677777777777777777766663 344444 3667777787778899999999999999 9986665544
Q ss_pred HHHHHHHHHHHHHH-HHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccc---cccchhhhhHHH
Q 014982 99 IHRFFSVSLLVFFL-LWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGD---HGWFYVSVRMGF 174 (415)
Q Consensus 99 i~~fF~~~ll~F~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~---~~W~y~~~~~~F 174 (415)
..+.-.+....|+. .+.|... .+ .|.+ +. .|. +..|
T Consensus 79 ~i~~l~~l~~pff~~v~~pll~---~n----------------------------------~~lg~iig~-i~l--~~~f 118 (412)
T PF01306_consen 79 FIAILLLLFGPFFIYVFGPLLQ---SN----------------------------------FWLGAIIGG-IYL--GLVF 118 (412)
T ss_dssp HHHHHHHTCHHHHHHTHHHHHH---TT-----------------------------------HHHHHHTT-TTT--TTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HH----------------------------------HHHHHHHHH-HHH--HHHH
Confidence 44332222222222 1121100 00 1210 00 000 0011
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccchhHH---HHHHHHHHhHHHHHhHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHH
Q 014982 175 FLWVALLNLITISSTWARVIDVMDSESGSRL---FGFIGAGATLGQLFGSLFAAGMAFLGPY-LLLFAACLMELAAQSSK 250 (415)
Q Consensus 175 Yiw~~vfnl~~~slFWsfandif~~~eAKRl---ygli~aGg~lG~I~Gg~l~~~la~~g~~-Lllvaa~ll~la~~~~~ 250 (415)
.--+. +.|.+..+.+||. ||-.=+.|++|-.+++.++..+-.++|. ...++..+..+.. +..
T Consensus 119 ~~~~~-------------~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~-lll 184 (412)
T PF01306_consen 119 NAGVP-------------LSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILL-LLL 184 (412)
T ss_dssp TTHHH-------------HHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred cccch-------------HHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHH-HHH
Confidence 11111 2355655556665 9999999999999999998887766653 2222221111111 111
Q ss_pred HHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHH
Q 014982 251 GIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVV 330 (415)
Q Consensus 251 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~ 330 (415)
.+.|..... +.+ ..|+. + .|+.+.+.++ ...++|.|-.+.+.++++.-...
T Consensus 185 ~~~~~~~~~------------~~~-~~~~~--------------~-~~~~~~~~~~-~~~l~k~~~fw~~~l~v~g~~~~ 235 (412)
T PF01306_consen 185 LLLKPDVPP------------QAE-VADAL--------------G-AKKDKVSLKD-VLSLFKMRNFWFFVLFVIGVAAI 235 (412)
T ss_dssp HSS---SSS------------SS--SSTTS--------------S-S------HHH-HHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHcCCcCch------------hhh-hhccc--------------c-cCCCCCcHHH-HHHHhcchhHHHHHHHHHHHHHH
Confidence 111211100 000 00000 0 1111224444 67889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHH----HHHHHHHHHHhhhhccc
Q 014982 331 SSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYL----MFYLLVTMTFLLNTWFS 406 (415)
Q Consensus 331 ~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~----m~~~~~~~~~~~~~~~~ 406 (415)
.+..|.|+...-+..++++++=++.+|...+..-++..++..+.-.+++|.|-+..+.+ |.+=++.+.+.-|+|..
T Consensus 236 Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i 315 (412)
T PF01306_consen 236 YDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVI 315 (412)
T ss_dssp HHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHH
Confidence 99999999999999999999999999999888888887776664448999999999866 33333444456666653
No 16
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.55 E-value=0.00019 Score=76.95 Aligned_cols=235 Identities=14% Similarity=0.124 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCC
Q 014982 66 LFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDP 145 (415)
Q Consensus 66 l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (415)
+..++.+-.+++.++-|.+.| |++|+|+....-...++..++..++...... +
T Consensus 50 v~~a~~LP~~Llsl~aG~laD--r~drrrili~~~~~~~~~~~~L~~l~~~~~~-------------------------~ 102 (524)
T PF05977_consen 50 VQAASTLPILLLSLFAGALAD--RFDRRRILILSQLLRALVALLLAVLAFFGLL-------------------------S 102 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHHHHHHhCcC-------------------------C
Confidence 334444455678888999999 9999999988776654444444333332210 0
Q ss_pred ccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHH
Q 014982 146 KAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~ 225 (415)
.|. .| ++=...++.+.+...-.=+.+.++.+.||-++--++.+.+.|+..++||.++.
T Consensus 103 -------------~~~----Ll-----~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 103 -------------PWL----LL-----ILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred -------------HHH----HH-----HHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 231 11 12223344444444455567889999999999999999999999999999988
Q ss_pred HHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccc
Q 014982 226 GMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWA 303 (415)
Q Consensus 226 ~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 303 (415)
.+. ..|+ ..+++-+++..++..+ +.++..+. .+ + . ..+++...+
T Consensus 161 ~Lva~~G~~~~f~inalsfl~~i~~---l~~~~~~~---------~~-~---~------------------~~~e~~~~~ 206 (524)
T PF05977_consen 161 ILVAFFGAAAAFLINALSFLISILA---LLRWKPPP---------PP-S---S------------------LPRERFFSA 206 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHccccc---------cc-c---c------------------cchhhhhhh
Confidence 865 6675 4333333333233322 22221110 00 0 0 001233458
Q ss_pred hHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcH
Q 014982 304 ILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGF 383 (415)
Q Consensus 304 ~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~ 383 (415)
+.||++++.+||.+..+.....++++...-+.-..--.+++.+... ...+|.+..+.++-.++-.++...+-++++.
T Consensus 207 l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~---a~~yGll~a~~gvGai~Gal~~~~l~~~~~~ 283 (524)
T PF05977_consen 207 LREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGG---ASGYGLLLAAFGVGAILGALLLPRLRRRLSS 283 (524)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCc---HHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 9999999999999998877777776655444444444555555322 3467888888888888888876665566665
Q ss_pred HHH
Q 014982 384 AMF 386 (415)
Q Consensus 384 ~~~ 386 (415)
...
T Consensus 284 ~~l 286 (524)
T PF05977_consen 284 RRL 286 (524)
T ss_pred chh
Confidence 544
No 17
>PRK10504 putative transporter; Provisional
Probab=98.54 E-value=0.00023 Score=73.58 Aligned_cols=153 Identities=14% Similarity=0.114 Sum_probs=99.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCcC--chhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 25 HETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 25 ~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~Gae--~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
++.+.++.+++.+|+....++..-|.-+.+.-+.|.+ +.-++.........+..++.+++.+ |+.|+|++......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~r~~~~~~~~~ 84 (471)
T PRK10504 7 SVRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLAD--RVGVRNIFFTAIVL 84 (471)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhchHHHHHHHHHH
Confidence 4455667777778888888877777666655554443 4445555546666788999999999 99999987755444
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHH
Q 014982 103 FSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLN 182 (415)
Q Consensus 103 F~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfn 182 (415)
+.+..+.+.+ ..+ .| .+. +......+..
T Consensus 85 ~~~~~~~~~~--~~~-----------------------------------------~~-----~l~----~~~~l~g~~~ 112 (471)
T PRK10504 85 FTLGSLFCAL--SGT-----------------------------------------LN-----ELL----LARVLQGVGG 112 (471)
T ss_pred HHHHHHHHHH--hCC-----------------------------------------HH-----HHH----HHHHHHHhhh
Confidence 4333332211 100 11 010 1222222222
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
-.........+.|.++.++.-+.+++...++++|..+|+.+...+. ..|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 113 AMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc
Confidence 2233456677889999888888999999999999999999887776 445
No 18
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.53 E-value=3.2e-05 Score=75.59 Aligned_cols=115 Identities=13% Similarity=0.061 Sum_probs=74.0
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccc
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSS 139 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (415)
.++..++.........+..++.+++.+ |++|++++........+..+++.+. .+
T Consensus 29 ~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~~~~~--~~---------------------- 82 (379)
T TIGR00881 29 KTDLGLLLSSFSIAYGISKFVMGSVSD--RSNPRVFLPIGLILCAIVNLFFGFS--TS---------------------- 82 (379)
T ss_pred HhHHHHHHHHHHHHHHhhhhhhhHHHH--hhCCeehhHHHHHHHHHHHHHHHHh--hh----------------------
Confidence 445666666667778888999999999 9999998766554443333222211 00
Q ss_pred cccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHH
Q 014982 140 NAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLF 219 (415)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~ 219 (415)
.| .+. +..+...+..-.........+.|.++.+|-.+..++...+.++|.++
T Consensus 83 -------------------~~-----~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 134 (379)
T TIGR00881 83 -------------------LW-----VMA----ALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGL 134 (379)
T ss_pred -------------------HH-----HHH----HHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHH
Confidence 12 111 22222233222233466778999999888888999999999999999
Q ss_pred hHH-HHHHHH
Q 014982 220 GSL-FAAGMA 228 (415)
Q Consensus 220 Gg~-l~~~la 228 (415)
|+. +...+.
T Consensus 135 ~~~~~~~~~~ 144 (379)
T TIGR00881 135 LPPLVLFGIA 144 (379)
T ss_pred HHHHHHHHHH
Confidence 984 544444
No 19
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.51 E-value=0.0004 Score=69.05 Aligned_cols=238 Identities=11% Similarity=0.027 Sum_probs=127.3
Q ss_pred CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhcc
Q 014982 59 GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVS 138 (415)
Q Consensus 59 Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (415)
+.++..++.........+..++.+++.| |++|++.+........+..+.+. ...
T Consensus 24 s~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~~~~~~~~~~~~~i~~~~~~----~~~-------------------- 77 (377)
T PRK11102 24 SAGSVQMTLSAYILGFAIGQLFYGPMAD--SFGRKPVILGGTLVFALAAVACA----LAQ-------------------- 77 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhchHHh--hcCChHHHHHHHHHHHHHHHHHH----HHc--------------------
Confidence 3456677666667777888999999999 99999887654443333322221 110
Q ss_pred ccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHH
Q 014982 139 SNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQL 218 (415)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I 218 (415)
+ .| ... +......+..-.......+.+.|.++.+|-.+..++...+..+|.+
T Consensus 78 ------~-------------~~-----~~~----~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 129 (377)
T PRK11102 78 ------T-------------ID-----QLI----YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPL 129 (377)
T ss_pred ------c-------------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 0 11 111 2222223333333446678899999999988999999999999999
Q ss_pred HhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014982 219 FGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSI 296 (415)
Q Consensus 219 ~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (415)
+|+.+...+. ..|. ....+.+++..++..+... ...+. .+ + + +.+
T Consensus 130 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---------~~-~---~--~~~--------------- 176 (377)
T PRK11102 130 LAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFF---FIPET---------LP-K---E--RRQ--------------- 176 (377)
T ss_pred HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH---hCCcc---------Cc-c---c--ccC---------------
Confidence 9998877765 4453 2222222222222222211 11110 00 0 0 000
Q ss_pred ccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 297 VKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKV-TVIAMTVS-SSLGRRRLLAEINSFIAVFILAGQLTL 374 (415)
Q Consensus 297 ~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~-~~v~~~~~-d~~~~t~f~g~~~~~~~i~tl~~qlf~ 374 (415)
+.+. ....+.++.++++|.+...++...+...... ....+. ....+.+. ++++ .|.+....++..++.+.+.
T Consensus 177 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~----~g~~~~~~~~~~~~~~~~~ 250 (377)
T PRK11102 177 PFHL-RTTIRNFASLFRHKRVLGYMLASGFSFAGMF-SFLTAGPFVYIELNGVSPQN----FGYYFALNIVFLFVMTIIN 250 (377)
T ss_pred CCCh-HHHHHHHHHHHcChHHHHHHHHHHHHHHHHH-HHHHcCHHHHHHHhCCCHHH----HHHHHHHHHHHHHHHHHHH
Confidence 0000 1234566778888876655444333322211 111111 11223232 3333 3445556666677777776
Q ss_pred HHHHhHhcHHHHHHH
Q 014982 375 TYAACRLGFAMFFYL 389 (415)
Q Consensus 375 t~iirrlG~~~~l~~ 389 (415)
..+.+|+|-+.++.+
T Consensus 251 g~l~~r~g~~~~~~~ 265 (377)
T PRK11102 251 SRFVRRVGALNMLRF 265 (377)
T ss_pred HHHHHHhCHHHHHHH
Confidence 668899999887654
No 20
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.49 E-value=0.00073 Score=68.07 Aligned_cols=145 Identities=10% Similarity=0.024 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHH
Q 014982 33 SSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVF 110 (415)
Q Consensus 33 ~~l~~F~Il~~y~iLRpirDsl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F 110 (415)
..+..++-..++.+.-|.-+.+.-+. +.+...++.........+..++.++++| |++|+|.+.......++..+.+
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~D--r~grr~~~~~~~~~~~~~~~~~ 90 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSD--RVGRRPVILVGMSIFILGTLVA 90 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH--hcCChHHHHHHHHHHHHHHHHH
Confidence 44445555666666555544443332 3445566655667777888899999999 9999998765443332222211
Q ss_pred HHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 014982 111 FLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 190 (415)
Q Consensus 111 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFW 190 (415)
.... + .| ... +......+..-.....-.
T Consensus 91 ----~~~~--------------------------~-------------~~-----~l~----~~~~~~g~~~~~~~~~~~ 118 (394)
T PRK11652 91 ----LFAH--------------------------S-------------LT-----VLI----AASAIQGLGTGVGGVMAR 118 (394)
T ss_pred ----HHHc--------------------------c-------------HH-----HHH----HHHHHHHhhhhHHHHHHH
Confidence 1110 0 11 000 111111111111222344
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
....|.++.++..+..++.+.|..+|..+|+.+...+. ..|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 160 (394)
T PRK11652 119 TLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG 160 (394)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 56788888888888899999999999999998877765 344
No 21
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.48 E-value=0.00024 Score=71.68 Aligned_cols=264 Identities=13% Similarity=0.059 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcc--cCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHH
Q 014982 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (415)
Q Consensus 29 ~~l~~~l~~F~Il~~y~iLRpirDsl~vs--~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ 106 (415)
+..|....+|+..+++.+.-|.=-...-+ .+.+++-++.....+...+..++.+++.+ |.+|++..........
T Consensus 5 ~~~~~~~~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~d--r~g~~~~~~~~~~~~~-- 80 (382)
T PRK11128 5 PTRWLALSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVK--DPSQLIPALRLLALLT-- 80 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHh--hhcchHHHHHHHHHHH--
Confidence 45666777888888888888843333322 24555666655667777888999999999 9998433222111110
Q ss_pred HHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHH---
Q 014982 107 LLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNL--- 183 (415)
Q Consensus 107 ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl--- 183 (415)
.++...+....+ + .| .+++...+.+.
T Consensus 81 -~~~~~~~~~~~~-------------------------~-------------~~------------~l~i~~~l~g~~~~ 109 (382)
T PRK11128 81 -LLFAVAFWFGAH-------------------------S-------------FW------------LLFVAIGLFNLFFS 109 (382)
T ss_pred -HHHHHHHHHhcc-------------------------c-------------HH------------HHHHHHHHHHHHHc
Confidence 111111111100 0 23 12222222211
Q ss_pred HHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 014982 184 ITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPE 261 (415)
Q Consensus 184 ~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~ 261 (415)
.....-.+.++|. .+|-.|-++....++++|..+|+.+...+. .+|. ....+.++...+...+. .. .++
T Consensus 110 ~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~--~~---~~~-- 180 (382)
T PRK11128 110 PLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ--LL---RPT-- 180 (382)
T ss_pred ccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH--Hc---cCC--
Confidence 1222344555654 334456688899999999999999988876 5564 22222222222222221 11 111
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 262 ELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTV 341 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~ 341 (415)
. ++ . ++.+ + + ++ +..++++.++|+|.++.+.+..++.+......+......
T Consensus 181 -------~--~~--~-~~~~----------~--~-~~----~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 231 (382)
T PRK11128 181 -------I--MP--Q-GESR----------Q--Q-ES----AGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIY 231 (382)
T ss_pred -------C--CC--c-cccc----------c--c-cc----cccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHH
Confidence 0 00 0 0000 0 0 00 123457889999988777666665554433232222223
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHH
Q 014982 342 IAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYL 389 (415)
Q Consensus 342 v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~ 389 (415)
.++.--++++. |.+.....+..+..+.....+.+|+|-+..+.+
T Consensus 232 ~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~ 275 (382)
T PRK11128 232 WQAAGYSASTI----GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLL 275 (382)
T ss_pred HHHCCCCHhHH----HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 33322233333 333333444444445544448899999888644
No 22
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.47 E-value=0.00099 Score=67.04 Aligned_cols=145 Identities=10% Similarity=0.013 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcccCc--CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHH
Q 014982 33 SSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVF 110 (415)
Q Consensus 33 ~~l~~F~Il~~y~iLRpirDsl~vs~Ga--e~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F 110 (415)
.+...+....+..+.-+.-..+.-+.|. +..-+..........+..++.+++.| |++||+.+......+.+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~D--r~g~r~~l~~~~~~~~i~~~~- 84 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIAD--RSGRKPVAIPGAALFIIASLL- 84 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHH--HhCChHHHHHHHHHHHHHHHH-
Confidence 3444455555544444443333333333 33444444445666777899999999 999998765433332222111
Q ss_pred HHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Q 014982 111 FLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTW 190 (415)
Q Consensus 111 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFW 190 (415)
..... + .|. .+ +......+..-......+
T Consensus 85 ---~~~~~-----~----------------------------------~~~----~~-----~~~~l~g~~~~~~~~~~~ 113 (392)
T PRK10473 85 ---CSLAE-----T----------------------------------SSL----FL-----AGRFLQGIGAGCCYVVAF 113 (392)
T ss_pred ---HHHhC-----c----------------------------------HHH----HH-----HHHHHHHhhhhHHHHHHH
Confidence 11110 0 110 11 122222332223334567
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
..++|.++.+|-.+..++...+.++|.++|+.+...+. ..|
T Consensus 114 ~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g 155 (392)
T PRK10473 114 AILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155 (392)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 88999999999999999999999999999988876654 444
No 23
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.46 E-value=0.00097 Score=68.17 Aligned_cols=146 Identities=13% Similarity=0.133 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcc-cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHH
Q 014982 33 SSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLV 109 (415)
Q Consensus 33 ~~l~~F~Il~~y~iLRpirDsl~vs-~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~ 109 (415)
++.--|+...+++..-|.-..-..+ .| ...+..+.........+..++.+++.+ |++|+++.........+..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~d--r~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIAD--RFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHH--HhCchHHHHHHHHHHHHHHHH
Confidence 3344455556655555554333322 33 444555544445555666789999999 999999876655444333332
Q ss_pred HHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 014982 110 FFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 189 (415)
Q Consensus 110 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slF 189 (415)
+.. .. + .|. .+ +..+...+..-......
T Consensus 93 ~~~----~~-----~----------------------------------~~~----l~-----~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 93 MAI----AH-----E----------------------------------PWL----LW-----LSCILSGLGGTLFDPPR 120 (400)
T ss_pred HHH----hc-----c----------------------------------HHH----HH-----HHHHHHHHHHHHHHHHH
Confidence 211 10 0 121 11 11111222211222233
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHhH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP 232 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g~ 232 (415)
-+.+.|.++.|+-.|-+++...+.++|..+|+.++..+...|.
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~ 163 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDF 163 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 4567899999999999999999999999999999888775553
No 24
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.35 E-value=0.00064 Score=67.38 Aligned_cols=177 Identities=15% Similarity=0.054 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh--------H-HHHHHHHHHHHH
Q 014982 175 FLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG--------P-YLLLFAACLMEL 244 (415)
Q Consensus 175 Yiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g--------~-~Lllvaa~ll~l 244 (415)
++..............+++.|.++.||-.+..++.++|.++|.++|+.++..+. ..| . ....+.+++..+
T Consensus 90 ~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~ 169 (356)
T TIGR00901 90 AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILP 169 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHH
Confidence 333344444444567788999999888888999999999999999998887765 444 2 133333433333
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchH---HHHHH
Q 014982 245 AAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNY---LLSVS 321 (415)
Q Consensus 245 a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~Y---L~~Ia 321 (415)
+....... .++. . +. + +. +++.+.+..++++.++++|. +..+.
T Consensus 170 ~~~~~~~~----~~e~--------~--~~--~--~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (356)
T TIGR00901 170 GLLVTLFL----AKEP--------Q--ED--A--SV----------------PKPLTQAVLKPIREFFQRKNMIQALLLL 215 (356)
T ss_pred HHHHHHHh----ccCC--------C--cc--c--cc----------------chhHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 22221111 1100 0 00 0 00 00011235678888999885 55554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHhcHHHHHHH
Q 014982 322 LFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRLGFAMFFYL 389 (415)
Q Consensus 322 ~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrlG~~~~l~~ 389 (415)
+..+++......++-.....+++.--|+++ .|.+....+.+..+++.+..+ +.+|+|.+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~ 280 (356)
T TIGR00901 216 LLIVLYKLGDSAATVLTTLFLLDMGFSKEE----IALVAKINGLLGAILGGLIGGIIMQPLNILYALLL 280 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH----HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 444455544444443333334442123333 355555555555555666666 7899998777544
No 25
>TIGR00895 2A0115 benzoate transport.
Probab=98.34 E-value=0.0007 Score=66.74 Aligned_cols=118 Identities=17% Similarity=0.106 Sum_probs=75.8
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccc
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSS 139 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (415)
.+...++........++..++.+++.+ |++|++.+........+..+++. ...
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~g~~~~~~~~~~~~~~~~~~~~----~~~--------------------- 103 (398)
T TIGR00895 51 PVQLGFLFSAGLIGMAFGALFFGPLAD--RIGRKRVLLWSILLFSVFTLLCA----LAT--------------------- 103 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHH--HhhhHHHHHHHHHHHHHHHHHHH----Hcc---------------------
Confidence 345566666666777888899999999 99999987654433322222211 110
Q ss_pred cccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHH
Q 014982 140 NAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLF 219 (415)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~ 219 (415)
+ .| .+. +..+...+..-......+..++|.++.++-.+..++...+.++|.++
T Consensus 104 -----~-------------~~-----~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 156 (398)
T TIGR00895 104 -----N-------------VT-----QLL----ILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAV 156 (398)
T ss_pred -----c-------------hH-----HHH----HHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHH
Confidence 0 11 010 12222222222334467788999999998899999999999999999
Q ss_pred hHHHHHHHH-HHh
Q 014982 220 GSLFAAGMA-FLG 231 (415)
Q Consensus 220 Gg~l~~~la-~~g 231 (415)
|+.+...+. ..|
T Consensus 157 ~~~~~~~l~~~~g 169 (398)
T TIGR00895 157 GGFLAGWLIPVFG 169 (398)
T ss_pred HHHHHHHHhhccc
Confidence 998877665 445
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.33 E-value=0.0015 Score=64.90 Aligned_cols=155 Identities=16% Similarity=0.083 Sum_probs=94.9
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCc--CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHH
Q 014982 23 HPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIH 100 (415)
Q Consensus 23 ~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~Ga--e~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~ 100 (415)
+++..+.+...++..++--+..+..-++-+.+.-+.|. ++.-++.........+..++.+++.| |++||+.+....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~D--r~g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGD--RYGRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHH
Confidence 34555556666666666666666666666655433443 44555555667788888999999999 999999876544
Q ss_pred HHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHH
Q 014982 101 RFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVAL 180 (415)
Q Consensus 101 ~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~v 180 (415)
....+..+.. .... + .| .+. +..+...+
T Consensus 85 ~~~~~~~~~~----~~~~--------------------------~-------------~~-----~l~----~~~~l~G~ 112 (405)
T TIGR00891 85 VLFSAGTLAC----GFAP--------------------------G-------------YI-----TMF----IARLVIGI 112 (405)
T ss_pred HHHHHHHHHH----HHhc--------------------------c-------------HH-----HHH----HHHHHHHh
Confidence 3332222211 1110 0 11 000 11111111
Q ss_pred HHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 181 LNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 181 fnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
..-......-+.++|.++.+|-.|..++...+.++|.++|+.+...+. ..|
T Consensus 113 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 113 GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 111122234566889999998889999999999999999998877765 344
No 27
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.33 E-value=0.00032 Score=80.95 Aligned_cols=163 Identities=10% Similarity=0.028 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRP 260 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~ 260 (415)
-+....--+.+.|+++.+|-.+-.++.+++.++|.++|+.++.++. ..|. ..+..++++..++..+... ..+.
T Consensus 123 a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~- 197 (1140)
T PRK06814 123 ALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLF----IPKT- 197 (1140)
T ss_pred HhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh----CCCC-
Confidence 3344456677899999999999999999999999999999998886 4443 2222222222222222211 1110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 261 EELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVT 340 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~ 340 (415)
++ . +.. .+ . +++...+..++++.+.++|.++.+.+...+...+...+....-.
T Consensus 198 -----------~~--~-~~~----------~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (1140)
T PRK06814 198 -----------GN--A-APD----------LK--I-DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPL 250 (1140)
T ss_pred -----------CC--C-CCC----------Ce--e-ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 00 0 000 00 0 01111246788999999999988887766665554444444445
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 014982 341 VIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACR 380 (415)
Q Consensus 341 ~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirr 380 (415)
.+++.+..+. ...|.+....++..++.+++.+.+.++
T Consensus 251 ~~~~~~g~~~---~~~g~~~~~~~~g~~ig~~~~g~l~~~ 287 (1140)
T PRK06814 251 LAKETLGGDE---NVATLFLAVFSVGVAVGSFLASKLSEG 287 (1140)
T ss_pred HHHHHcCCch---HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5555554332 234555555556666666665555543
No 28
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.32 E-value=0.00041 Score=70.65 Aligned_cols=124 Identities=10% Similarity=0.011 Sum_probs=73.6
Q ss_pred CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhcc
Q 014982 59 GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVS 138 (415)
Q Consensus 59 Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (415)
+..+..++.....+..++..++.+++.+ |++|+|++......+.+.++..........+
T Consensus 50 s~~~~g~~~~~~~l~~~~~~~~~G~l~d--r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------- 108 (417)
T PRK10489 50 STLQVGLSVTLTGGAMFIGLMVGGVLAD--RYDRKKLILLARGTCGLGFIGLALNAFLPEP------------------- 108 (417)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhHHHhh--hcCCceEEEehHHHHHHHHHHHHHHHHcCCC-------------------
Confidence 3445666666667778888899999999 9999998765443333322222211110000
Q ss_pred ccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHH
Q 014982 139 SNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQL 218 (415)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I 218 (415)
+ .| ... +..+...+..-+.....=..+.|.++.++-.|..++...+.++|.+
T Consensus 109 ------~-------------~~-----~l~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 160 (417)
T PRK10489 109 ------S-------------LL-----AIY----LLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV 160 (417)
T ss_pred ------c-------------HH-----HHH----HHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHH
Confidence 0 11 000 1111222221111122233467888888888889999999999999
Q ss_pred HhHHHHHHHH-HHh
Q 014982 219 FGSLFAAGMA-FLG 231 (415)
Q Consensus 219 ~Gg~l~~~la-~~g 231 (415)
+|+.++..+. ..|
T Consensus 161 ~g~~l~g~l~~~~~ 174 (417)
T PRK10489 161 ISPALGGLLIAAGG 174 (417)
T ss_pred hHHHHHHHHHHHHh
Confidence 9999887765 445
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.32 E-value=0.0015 Score=66.27 Aligned_cols=129 Identities=11% Similarity=0.094 Sum_probs=80.4
Q ss_pred HHHhhhhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 014982 44 YFVVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLS 123 (415)
Q Consensus 44 y~iLRpirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~ 123 (415)
.+....++++..++ .++..++.....+...+..++.+++.+ |++|++++........+..+++.+. ..
T Consensus 38 ~~~~~~i~~~~~~s--~~~~~~~~~~~~~~~~l~~~~~g~l~d--r~g~r~~l~~~~~~~~~~~~~~~~~--~~------ 105 (426)
T PRK12307 38 FYIMYLIKADLGLT--DMEGAFLATAAFIGRPFGGALFGLLAD--KFGRKPLMMWSIVAYSVGTGLSGLA--SG------ 105 (426)
T ss_pred HHHHHHHHHHhCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHHHHHHHH--hH------
Confidence 34445555555544 334555555567777888999999999 9999999876665554333322221 10
Q ss_pred chhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchh
Q 014982 124 KLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGS 203 (415)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAK 203 (415)
.| .+. +......+..-......-..+.|.++.++-.
T Consensus 106 -----------------------------------~~-----~l~----~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~ 141 (426)
T PRK12307 106 -----------------------------------VI-----MLT----LSRFIVGMGMAGEYACASTYAVESWPKHLKS 141 (426)
T ss_pred -----------------------------------HH-----HHH----HHHHHHHHHHhhHHHHHHHHHHHhCCHhHhh
Confidence 11 010 1111222221122334556688999999888
Q ss_pred HHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 204 RLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 204 Rlygli~aGg~lG~I~Gg~l~~~la 228 (415)
|..++..+|.++|.++|+.+...+.
T Consensus 142 ~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 142 KASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 8999999999999999987766654
No 30
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.30 E-value=0.00093 Score=76.65 Aligned_cols=234 Identities=14% Similarity=0.046 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccc
Q 014982 69 GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAA 148 (415)
Q Consensus 69 ~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (415)
+.++..++..++.|++++ |++|++++.+.....++..++..+......
T Consensus 55 ~~~l~~~l~~~~~G~l~D--r~grk~~l~~~~~~~~~~~~~~~~~~~~~~------------------------------ 102 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLAD--KFSKNRVIRIVKLFEVGLTLLIVLAYYLGW------------------------------ 102 (1146)
T ss_pred HHHHHHHHHhhhHhhhcc--cccHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------------------
Confidence 335556788899999999 999999887654433222222211111110
Q ss_pred cccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 149 VDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 149 ~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.| ... +..+...+..-+....-.+++.|+++.+|--|..|+.+++.++|.++|+.++.++.
T Consensus 103 ----------~~-----~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 103 ----------FW-----LAF----AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred ----------HH-----HHH----HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111 12222233333333455678999999999899999999999999999999988876
Q ss_pred -H--------Hh-H-HHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014982 229 -F--------LG-P-YLL-LFAACLMELAAQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSI 296 (415)
Q Consensus 229 -~--------~g-~-~Ll-lvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (415)
. .+ . +.. ...+.+..++...... ..... .. ++ . ..+ + +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--------~~-~~--~--~~~----------~--~- 213 (1146)
T PRK08633 164 ESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYR----LPKVP--------AA-AP--E--VFD----------K--K- 213 (1146)
T ss_pred HhhccccccccccchHHHHHHHHHHHHHHHHHHhc----CcCCC--------CC-Cc--c--ccc----------c--c-
Confidence 3 22 1 222 2211111111111111 11100 00 00 0 000 0 0
Q ss_pred ccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 297 VKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY 376 (415)
Q Consensus 297 ~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~ 376 (415)
++.......++++.++++|.+....+...++................+.+.-+.. ...|.+....++.+++.+++...
T Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~--~~~g~~~~~~~ig~~~g~~~~g~ 291 (1146)
T PRK08633 214 KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNT--FQVQYLLAASAIGIGIGSLLAGR 291 (1146)
T ss_pred ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111234677899999999988766655555444444333333444444432222 13355555566666666666554
Q ss_pred HHhHhcHHH
Q 014982 377 AACRLGFAM 385 (415)
Q Consensus 377 iirrlG~~~ 385 (415)
+.+|.|-+.
T Consensus 292 l~~r~~~~~ 300 (1146)
T PRK08633 292 LSGRHIELG 300 (1146)
T ss_pred HhCCceEcc
Confidence 677776443
No 31
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.29 E-value=0.0025 Score=64.91 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcc--cCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHH
Q 014982 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (415)
Q Consensus 29 ~~l~~~l~~F~Il~~y~iLRpirDsl~vs--~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ 106 (415)
.+.+..+.-|+...+++...+.-+.+.-+ .+.+++.++.........+..++.+++.| |++|||++......+.+.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d--r~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAE--IIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHH--HcCcHHHHHHHHHHHHHH
Confidence 44555555555555544433333333222 34566777777667778889999999999 999999987766555444
Q ss_pred HHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHH-HHHHH
Q 014982 107 LLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVAL-LNLIT 185 (415)
Q Consensus 107 ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~v-fnl~~ 185 (415)
.+++.. +..... + .| ... +.+....+ ....
T Consensus 92 ~~~~~~-~~~~~~-------------------------~-------------~~-----~l~----~~~~i~G~g~~~~- 122 (402)
T TIGR00897 92 HAAFIV-FGLGHA-------------------------N-------------YP-----LIL----LFYGIRGLGYPLF- 122 (402)
T ss_pred HHHHHH-HhccCc-------------------------c-------------HH-----HHH----HHHHHHHcchHHH-
Confidence 332211 111100 0 11 000 11111111 1111
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhHHH-HHhHHHHHHHH-HHh
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQ-LFGSLFAAGMA-FLG 231 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~lG~-I~Gg~l~~~la-~~g 231 (415)
....=..+.+.++.||-.|-.|+..++.++|. ++|+.++..+. .+|
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 123 AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 11111234567788888888999999999996 67887766654 444
No 32
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.29 E-value=0.0025 Score=64.71 Aligned_cols=171 Identities=20% Similarity=0.087 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH--HhH-HH-HHHHHHHHHHHHHHHHHHhh
Q 014982 179 ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF--LGP-YL-LLFAACLMELAAQSSKGIYK 254 (415)
Q Consensus 179 ~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~--~g~-~L-llvaa~ll~la~~~~~~L~~ 254 (415)
..++........+++.|.++.||-.|.-++...|.++|.++|+.+...+.. .|. .. .+.+++.+ ++.... .
T Consensus 105 ~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l-~~~l~~----~ 179 (402)
T PRK11902 105 AFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLML-AGALTT----L 179 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHH-HHHHHH----H
Confidence 445555556789999999999999999999999999999999988776653 353 22 33333222 222211 1
Q ss_pred hccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014982 255 EIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFF 334 (415)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv 334 (415)
..+.. + ++ + ++ +++.+.+..++++.++|+|.++.+++...++.......
T Consensus 180 ~~~e~---------~--~~--~-~~-----------------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~ 228 (402)
T PRK11902 180 WAPEP---------E--VP--A-RP-----------------PRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFA 228 (402)
T ss_pred hcCCC---------c--cc--c-cc-----------------cchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH
Confidence 11100 0 00 0 00 00111135778889999999888877777766554433
Q ss_pred HHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHhcHHHHHHH
Q 014982 335 YFQKVTVIAMTVS-SSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRLGFAMFFYL 389 (415)
Q Consensus 335 ~f~~~~~v~~~~~-d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrlG~~~~l~~ 389 (415)
.........+.+. ++++ .|.+....+.+..++.....+ +.+|+|-+..+.+
T Consensus 229 ~~~~~~~l~~~~G~~~~~----~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~ 281 (402)
T PRK11902 229 GSLSTTFLIRGAGFSAGE----VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLML 281 (402)
T ss_pred HHHHHHHHHHhcCCCHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3222222333232 3332 344444444443334444455 7899997776544
No 33
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.28 E-value=0.0032 Score=62.09 Aligned_cols=139 Identities=12% Similarity=0.109 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHhhhhhhh-hhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHH
Q 014982 34 SSCFFFILSAYFVVLPLRDE-GAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVF 110 (415)
Q Consensus 34 ~l~~F~Il~~y~iLRpirDs-l~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F 110 (415)
.+.+++....++..-|+-.. +.-+. ..+...++.........+..++.+++.+ |+.|++.+........+..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 7 WFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVD--KFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHHHHHHHHHHH
Confidence 33444444455555555443 22222 3555667776778888899999999999 9999998766555443333322
Q ss_pred HHHHHh-hccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 014982 111 FLLWQS-SSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 189 (415)
Q Consensus 111 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slF 189 (415)
.+. . + .| .+. +..+...+.+... ..-
T Consensus 85 ~~~--~~~-----------------------------------------~~-----~~~----~~~~~~g~~~~~~-~~~ 111 (366)
T TIGR00886 85 GLA--VQS-----------------------------------------YS-----VLL----LLRLFIGIAGGSF-ASC 111 (366)
T ss_pred HHH--hhh-----------------------------------------HH-----HHH----HHHHHHHHhchhh-HhH
Confidence 211 1 1 11 111 1222222222111 223
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
-..++|.++.+|-.+..++...++++|..+|+.+...+
T Consensus 112 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 112 MPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 46788999988888888888877777776666555443
No 34
>PRK11043 putative transporter; Provisional
Probab=98.28 E-value=0.0041 Score=62.80 Aligned_cols=139 Identities=14% Similarity=0.040 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhhhh----hhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHH
Q 014982 37 FFFILSAYFVVLPL----RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFL 112 (415)
Q Consensus 37 ~F~Il~~y~iLRpi----rDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~ 112 (415)
.++-..+..+.-|. ++++.+ +.+++.++.........+..++.+++.| |++|++.+......+.+..++.
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~~-- 88 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQT--SASAVSASLSLFLAGFALGQLLWGPLSD--RYGRKPVLLAGLSLFALGSLGM-- 88 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHh--hcCCcHHHHHHHHHHHHHHHHH--
Confidence 34444444444554 444433 3556666666667777889999999999 9999998754433332222111
Q ss_pred HHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 014982 113 LWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWAR 192 (415)
Q Consensus 113 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsf 192 (415)
.... + .|. .+ +..+...+..-.......+.
T Consensus 89 --~~~~--------------------------~-------------~~~----l~-----~~~~l~G~~~~~~~~~~~~~ 118 (401)
T PRK11043 89 --LWVE--------------------------S-------------AAQ----LL-----VLRFVQAVGVCSAAVIWQAL 118 (401)
T ss_pred --HHhc--------------------------C-------------HHH----HH-----HHHHHHHhhhHHHHHHHHHH
Confidence 1110 0 110 00 11111111111122355678
Q ss_pred HHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 193 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 193 andif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
+.|.++.++..|.++.+..+.++|..+|+.+...+. ..|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 119 VIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999999999999998887765 445
No 35
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.27 E-value=0.0031 Score=65.07 Aligned_cols=129 Identities=12% Similarity=0.051 Sum_probs=76.3
Q ss_pred hhhhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchh
Q 014982 47 VLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLE 126 (415)
Q Consensus 47 LRpirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~ 126 (415)
+-++.+++.++ .++.-++.........+..++-+++.+ |++|++++.+....+.+..+++.. ..+
T Consensus 46 ~~~~~~~~g~s--~~~~g~~~~~~~~~~~~~~~~~G~l~d--r~g~r~~~~~~~~~~~~~~~~~~~--~~~--------- 110 (434)
T PRK11663 46 MPEMLADLGLS--RSDIGLLATLFYITYGVSKFVSGIVSD--RSNARYFMGIGLIATGIINILFGF--SSS--------- 110 (434)
T ss_pred hHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHhhhhHHHh--hcCCchhHHHHHHHHHHHHHHHHH--HhH---------
Confidence 33444444332 334445555556777788899999999 999999875554443333222211 100
Q ss_pred hhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHH
Q 014982 127 SVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLF 206 (415)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRly 206 (415)
.| .+. +.++...+..-......-..++|.++.+|--+..
T Consensus 111 --------------------------------~~-----~l~----~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~ 149 (434)
T PRK11663 111 --------------------------------LW-----AFA----LLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWW 149 (434)
T ss_pred --------------------------------HH-----HHH----HHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHH
Confidence 11 111 1111112111111123346789999988888899
Q ss_pred HHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 207 GFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 207 gli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
++...+.++|+++|+.+...+. ..|
T Consensus 150 ~~~~~~~~~g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 150 AIWNTAHNVGGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999998877765 445
No 36
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.27 E-value=0.0032 Score=63.45 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=79.0
Q ss_pred hhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhh
Q 014982 49 PLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESV 128 (415)
Q Consensus 49 pirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~ 128 (415)
++++.+.. +.++..++.........+..++.+++.| |++|+|++......+.+..++ ..... +
T Consensus 40 ~~~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~----~~~~~-----~---- 102 (406)
T PRK11551 40 RMAQEFGL--DVAQMGWAFSAGILGLLPGALLGGRLAD--RIGRKRILIVSVALFGLFSLA----TAQAW-----D---- 102 (406)
T ss_pred HHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCchhHHHHHHHHHHHHHH----HHHhc-----c----
Confidence 34444333 4556777777767778888999999999 999999977644333222211 11110 0
Q ss_pred hhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH
Q 014982 129 SHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGF 208 (415)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygl 208 (415)
.| ... +..+...+-.-.........+.|.++.++--+..++
T Consensus 103 ------------------------------~~-----~~~----~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 143 (406)
T PRK11551 103 ------------------------------FP-----SLL----VARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSL 143 (406)
T ss_pred ------------------------------HH-----HHH----HHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 11 000 222222332223344667789999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHH
Q 014982 209 IGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 209 i~aGg~lG~I~Gg~l~~~la 228 (415)
...+.++|+.+|+.+...+.
T Consensus 144 ~~~~~~~g~~~~~~~~~~~~ 163 (406)
T PRK11551 144 MYCGVPFGGALASVIGVLAA 163 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999988765554
No 37
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.26 E-value=0.0035 Score=63.37 Aligned_cols=265 Identities=11% Similarity=0.058 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 014982 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (415)
Q Consensus 30 ~l~~~l~~F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~l 107 (415)
..++.+.+|+...++.+.-|.=....-+.| .+++.++.........+..++.+.+.+ |.+|+.....+.. ...
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d--~~~~~~~~~~~~~---~~~ 80 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIK--DANHIIIALRLLA---LAS 80 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCcHHHHHHHHH---HHH
Confidence 345667777777888888785444433334 445666555667778888999999999 9887443322221 111
Q ss_pred HHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 014982 108 LVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 187 (415)
Q Consensus 108 l~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~s 187 (415)
.++.+.+....+ + .| ... +.++....+......
T Consensus 81 ~l~~~~~~~~~~-------------------------~-------------~~-----~l~----~~~~l~~~~~~~~~p 113 (382)
T TIGR00902 81 AIFAAAFSAGAH-------------------------N-------------AW-----LLF----IAIGLFALFFSAGMP 113 (382)
T ss_pred HHHHHHHHHhhh-------------------------h-------------HH-----HHH----HHHHHHHHHHccchh
Confidence 222222211100 0 12 111 111111111111122
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPP 265 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~ 265 (415)
.-=+++.+ + .+|-.|-||.+..++++|.++|+.+...+. .+|. ....+.+.++.+.. .. .+ ..+.
T Consensus 114 ~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~-~~---~~~~------ 180 (382)
T TIGR00902 114 IGDALANT-W-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IG-FL---IKPT------ 180 (382)
T ss_pred HHHHHHHH-H-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HH-HH---cCCC------
Confidence 22233333 2 244456799999999999999998887776 5564 22211111111111 11 11 1110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014982 266 LRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMT 345 (415)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~ 345 (415)
. +++.+ ++. + ++ +..+.++.++|+|.+....+...+........+-.....+++
T Consensus 181 ---~--~~~~~-~~~-----------~----~~----~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~- 234 (382)
T TIGR00902 181 ---I--PPKDA-IPE-----------D----ES----QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA- 234 (382)
T ss_pred ---C--CCCcc-ccc-----------c----cc----ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0 00000 000 0 00 112336678899988877777666655544444433334444
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHhcHHHHHHH
Q 014982 346 VSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRLGFAMFFYL 389 (415)
Q Consensus 346 ~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrlG~~~~l~~ 389 (415)
..-+++...+ ... .+.+.-+.+.+.++ +.+|+|.+..+.+
T Consensus 235 ~g~s~~~~g~---l~~-~~~~~~i~~~~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 235 AGISASATGL---LWG-IGVLAEIIIFAFSNKLFQNCSARDLLLI 275 (382)
T ss_pred CCCCHhHHHH---HHH-HHHHHHHHHHHHhHHHHhhCCHHHHHHH
Confidence 4333333333 333 35555556666676 7899999998643
No 38
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.24 E-value=0.0024 Score=65.84 Aligned_cols=119 Identities=5% Similarity=-0.062 Sum_probs=69.6
Q ss_pred cCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhc
Q 014982 58 LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAV 137 (415)
Q Consensus 58 ~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~ 137 (415)
.+.++..++.........+..++.+++.+ |++|++.+......+.+..++... .+..
T Consensus 58 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~d--r~g~~~~~~~~~~~~~~~~~~~~~--~~~~------------------- 114 (438)
T TIGR00712 58 FSKGELGFALSAISIAYGFSKFIMGSVSD--RSNPRVFLPAGLILSAAVMLLMGF--VPWA------------------- 114 (438)
T ss_pred CCHhHhHHHHHHHHHHHHHhhhccchhhh--ccCCceehHHHHHHHHHHHHHHhc--cccc-------------------
Confidence 34666777777777888889999999999 999998765433333222222111 1000
Q ss_pred cccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHH
Q 014982 138 SSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQ 217 (415)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~ 217 (415)
.++ .| .. .++.....+..-......-..+.|.++.+|--+..++.+.+.++|+
T Consensus 115 -----~~~-------------~~-----~l----~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 115 -----TSS-------------IA-----IM----FVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGG 167 (438)
T ss_pred -----cch-------------HH-----HH----HHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHh
Confidence 000 01 00 0111112221111111122356788999998899999999999999
Q ss_pred HHhHHHHHH
Q 014982 218 LFGSLFAAG 226 (415)
Q Consensus 218 I~Gg~l~~~ 226 (415)
.+|+.+...
T Consensus 168 ~~~~~l~~~ 176 (438)
T TIGR00712 168 GIPPLLVLL 176 (438)
T ss_pred HHHHHHHHH
Confidence 998877654
No 39
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.21 E-value=0.0035 Score=61.13 Aligned_cols=52 Identities=17% Similarity=0.152 Sum_probs=39.2
Q ss_pred HhhhhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHH
Q 014982 46 VVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHR 101 (415)
Q Consensus 46 iLRpirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~ 101 (415)
++-+++|++.++ .+++.++.........+..++.+++.| |+.||+.+.....
T Consensus 25 ~~~~~~~~~~~s--~~~~g~~~s~~~~~~~~~~~~~G~l~d--~~G~r~~~~~~~~ 76 (377)
T TIGR00890 25 LAPPLGRYFGVG--VTAVAIWFTLLLIGLAMSMPVGGLLAD--KFGPRAVAMLGGI 76 (377)
T ss_pred HHHHHHHHhCCC--HHHHHHHHHHHHHHHHHHhhhhHHHHH--HcCccchhHHhHH
Confidence 455566665543 556777777778888999999999999 9999999765443
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.20 E-value=0.0044 Score=62.50 Aligned_cols=144 Identities=14% Similarity=0.067 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHH
Q 014982 33 SSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVF 110 (415)
Q Consensus 33 ~~l~~F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F 110 (415)
.....|+.-.+....-|.=+.+.-+.| .+.+.++.........+..++.+++.+ |++|++.+......+.+..++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 8 LALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSS--RYSLKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHc--cCccHHHHHHHHHHHHHHHHHH
Confidence 334456666666666665555444433 345667766778888899999999999 9999999876655544333222
Q ss_pred HHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHH-HHHHHHHH
Q 014982 111 FLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALL-NLITISST 189 (415)
Q Consensus 111 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vf-nl~~~slF 189 (415)
. ... + .|. .+ +......+. +... ...
T Consensus 86 ~----~~~--------------------------~-------------~~~----l~-----~~r~l~G~~~~~~~-~~~ 112 (382)
T PRK10091 86 T----LSS--------------------------S-------------YLM----LA-----IGRLVSGFPHGAFF-GVG 112 (382)
T ss_pred H----HhC--------------------------c-------------HHH----HH-----HHHHHHHhhhHHHH-HHH
Confidence 1 111 0 110 01 111111111 1111 122
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
=..+.|.++.++--|..++..+|.++|..+|+.+...+. ..|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 155 (382)
T PRK10091 113 AIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc
Confidence 235778888777667899999999999999988877765 445
No 41
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.19 E-value=0.011 Score=60.34 Aligned_cols=119 Identities=8% Similarity=0.018 Sum_probs=80.0
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccc
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSS 139 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (415)
.++..+..........+..++.+++.| |++|+|++......+++..+...+ ..+
T Consensus 54 ~~~~g~~~~~~~~~~~~~~~~~g~l~D--r~grr~~~~~~~~~~~~~~~~~~~--~~~---------------------- 107 (394)
T PRK10213 54 EGVAGQSVTVTAFVAMFASLFITQTIQ--ATDRRYVVILFAVLLTLSCLLVSF--ANS---------------------- 107 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCcHHHHHHHHHHHHHHHHHHHH--HCh----------------------
Confidence 455666666667777888999999999 999999987777666544333221 111
Q ss_pred cccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHH
Q 014982 140 NAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLF 219 (415)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~ 219 (415)
.| .+. +.-+...+..-.....--..++|.++.+|--|..++...+.++|.++
T Consensus 108 -------------------~~-----~l~----~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i 159 (394)
T PRK10213 108 -------------------FS-----LLL----IGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI 159 (394)
T ss_pred -------------------HH-----HHH----HHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH
Confidence 12 000 12223333322233455667889998888888999999999999999
Q ss_pred hHHHHHHHH-HHhH
Q 014982 220 GSLFAAGMA-FLGP 232 (415)
Q Consensus 220 Gg~l~~~la-~~g~ 232 (415)
|+.+...+. .+|.
T Consensus 160 g~~l~~~l~~~~gw 173 (394)
T PRK10213 160 AAPLGSFLGELIGW 173 (394)
T ss_pred HHHHHHHHHhhcCH
Confidence 999988876 4553
No 42
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.18 E-value=0.0069 Score=64.06 Aligned_cols=155 Identities=9% Similarity=-0.083 Sum_probs=90.9
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCcC--chhhHHHHHHHHHHHHHHHHHHHhcCCCC-----Cchh
Q 014982 22 LHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNL-----SKAK 94 (415)
Q Consensus 22 i~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~Gae--~LP~l~~~t~~~~ll~~~lys~L~~~~r~-----sr~r 94 (415)
++..+.+|...++...|.-...+.+.-+.--...-..|.+ .+-.+.....+ .+..++.+.+.+ |+ .|||
T Consensus 6 l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~D--r~~~~~~Grrr 81 (491)
T PRK11010 6 LRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA--YVFKFLWSPLMD--RYTPPFLGRRR 81 (491)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--HHHHHHHHHHHH--cccccCCCCch
Confidence 3444566777777777777666666555433332223544 35553222222 367889999999 87 7777
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHH
Q 014982 95 A-LVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMG 173 (415)
Q Consensus 95 l-~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~ 173 (415)
. +.......++..... .+..+ ..+ .|. .+ +
T Consensus 82 ~~ll~~~i~~~~~~~~~----a~~~~----------------------------------~~~--l~~----l~-----~ 112 (491)
T PRK11010 82 GWLLATQLLLLVAIAAM----GFLEP----------------------------------GTQ--LRW----LA-----A 112 (491)
T ss_pred HHHHHHHHHHHHHHHHH----HHcCC----------------------------------cch--HHH----HH-----H
Confidence 5 333322222222211 11110 000 110 11 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH
Q 014982 174 FFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 229 (415)
Q Consensus 174 FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~ 229 (415)
.++.........-....++++|.++.||-.|.-++...|..+|.++|+.+...+..
T Consensus 113 ~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~ 168 (491)
T PRK11010 113 LAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD 168 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33334444444455788999999998988888999999999999999988777763
No 43
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.15 E-value=0.0072 Score=62.12 Aligned_cols=45 Identities=18% Similarity=0.320 Sum_probs=37.5
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.-+....|.++.+|..|..++++.+.++|.++|+.+...+. ..|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 124 VGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 34577889999999999999999999999999998877765 4453
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.15 E-value=0.0044 Score=63.78 Aligned_cols=147 Identities=12% Similarity=0.123 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHH
Q 014982 31 LHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLL 108 (415)
Q Consensus 31 l~~~l~~F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll 108 (415)
+...+..|+...+..+..+.-..+.-+.| .++..|+.........+..++.+++.+ |++|||.+......+.+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAK--RFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHH--HhCcHHHHHHHHHHHHHHHH
Confidence 33444556666666666665555544433 456778777778888899999999999 99999987655444332222
Q ss_pred HHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHH
Q 014982 109 VFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISS 188 (415)
Q Consensus 109 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~sl 188 (415)
+. .... + .| ... +......+..-.....
T Consensus 83 ~~----~~~~--------------------------~-------------~~-----~l~----~~~~~~G~~~~~~~~~ 110 (485)
T TIGR00711 83 LC----GVAP--------------------------N-------------LE-----LMI----IFRVIQGFGGGPLIPL 110 (485)
T ss_pred HH----hCcC--------------------------C-------------HH-----HHH----HHHHHHHhhhhhHHHH
Confidence 21 1110 0 11 111 2222223333334456
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 189 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 189 FWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
-...+.|.++.+|-.|.+++.+.+.++|..+|+.+...+. ..|
T Consensus 111 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 154 (485)
T TIGR00711 111 SFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH 154 (485)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC
Confidence 6788999999888888999999999999999998887775 445
No 45
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.12 E-value=0.0065 Score=58.41 Aligned_cols=236 Identities=19% Similarity=0.135 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 014982 34 SSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFF 111 (415)
Q Consensus 34 ~l~~F~Il~~y~iLRpirDsl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~ 111 (415)
....++...++....+.-....-+. +.++..++.........+..++.+++.| |++|||.+........+..+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d--~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSD--RFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH--HhCCchhhHHHHHHHHHHHHHHH
Confidence 3445566666666666666555443 4455666666778888899999999999 99999966544433322222221
Q ss_pred HHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 014982 112 LLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWA 191 (415)
Q Consensus 112 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWs 191 (415)
.. .+ .| .+. +..+...+..-......=+
T Consensus 83 ~~--~~-----------------------------------------~~-----~~~----~~~~l~g~~~~~~~~~~~~ 110 (352)
T cd06174 83 FA--SS-----------------------------------------LW-----LLL----VGRFLLGLGGGALYPAAAA 110 (352)
T ss_pred Hh--cc-----------------------------------------HH-----HHH----HHHHHHHcccccccHhHHH
Confidence 11 00 11 000 1111112211122234456
Q ss_pred HHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 014982 192 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLRKA 269 (415)
Q Consensus 192 fandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~~~ 269 (415)
...|.++.||-.+.+++...+.++|.++|+.++..+. ..+. ....+.+++..++......+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 174 (352)
T cd06174 111 LIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL---------------- 174 (352)
T ss_pred HHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 6899999999999999999999999999998887776 3332 222222222222222211110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Q 014982 270 DSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSS 349 (415)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~ 349 (415)
|.+..+.....+.....+..........++.+..+
T Consensus 175 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (352)
T cd06174 175 ---------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLS 209 (352)
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 34455555555666555555555555566654333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHH-HH
Q 014982 350 LGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAM-FF 387 (415)
Q Consensus 350 ~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~-~l 387 (415)
++. .|.+....++..++.+.+...+.+|+|-+. .+
T Consensus 210 ~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 245 (352)
T cd06174 210 AAE---AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL 245 (352)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 333 345555666666666666555788888887 54
No 46
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.11 E-value=0.0031 Score=65.64 Aligned_cols=147 Identities=12% Similarity=0.095 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHhh--------hhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 31 LHSSSCFFFILSAYFVVL--------PLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 31 l~~~l~~F~Il~~y~iLR--------pirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
+..+...|+..+..|+.| ++++++.+ +..++-++..+-.....+..++.|++.+ |+++||++......
T Consensus 28 ~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~D--r~g~r~~l~~~~~~ 103 (467)
T PRK09556 28 MQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL--STTELGMIGLGFSITYGVGKTLVGYYAD--GKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhhHhh--ccCccchHHHHHHH
Confidence 334444444444445544 33343333 2344556555556667788899999999 99999988765544
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHH
Q 014982 103 FSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLN 182 (415)
Q Consensus 103 F~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfn 182 (415)
..+....+..+.....+ + .| ... ++.....+..
T Consensus 104 ~~~~~~~~~~~~~~~~~-------------------------~-------------~~-----~l~----~~r~l~G~~~ 136 (467)
T PRK09556 104 SAICMLGFGASLGSGSV-------------------------S-------------LG-----LMI----ALWALSGFFQ 136 (467)
T ss_pred HHHHHHHHHHHHhcccc-------------------------h-------------HH-----HHH----HHHHHHHHHH
Confidence 43333333332211100 0 11 111 2222222221
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
-+....-=..++|.++.+|--|..|+.++++++|.++|+.+..++.
T Consensus 137 ~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 137 STGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred hccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 1111111156899999888778889999999999999988876554
No 47
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.07 E-value=0.0016 Score=66.19 Aligned_cols=162 Identities=17% Similarity=0.191 Sum_probs=85.3
Q ss_pred HHHHHHHhhc-CccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh----H--H--HHHHHHHHHHHHHHHHHHHhhhcc
Q 014982 188 STWARVIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG----P--Y--LLLFAACLMELAAQSSKGIYKEIP 257 (415)
Q Consensus 188 lFWsfandif-~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g----~--~--Lllvaa~ll~la~~~~~~L~~~~~ 257 (415)
-+++...|++ +.+|=.|+.+.-..++++|+++++.+...+. .++ . + ...+.+++..++.. .......
T Consensus 119 ~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~---~~~~~~~ 195 (437)
T TIGR00792 119 PYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLI---ICFFGTK 195 (437)
T ss_pred cHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHH---HHHcCCE
Confidence 5677888887 4567778899999999999888776655543 222 1 2 11121211111111 1111111
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 014982 258 RRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQ 337 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~ 337 (415)
++ ++ .. +. +++.+.+..+.+|.++++|.+..+++..+++..........
T Consensus 196 e~------------~~-~~--~~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
T TIGR00792 196 ER------------YS-EI--PK----------------NIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGV 244 (437)
T ss_pred ec------------CC-CC--Cc----------------ccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcch
Confidence 00 00 00 00 00112357888999999999888777766666555443221
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHH
Q 014982 338 KVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFF 387 (415)
Q Consensus 338 ~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l 387 (415)
..-..+....++++ .+.+....++..++...+.+.+.+|+|-+.++
T Consensus 245 ~~~~~~~~~~~~~~----~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~ 290 (437)
T TIGR00792 245 QVYYFTYVLGDPEL----FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF 290 (437)
T ss_pred hheeEeeecCChHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 11112222233333 23333444556666666655578999977764
No 48
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.05 E-value=0.017 Score=60.81 Aligned_cols=148 Identities=13% Similarity=0.082 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 014982 30 LLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (415)
Q Consensus 30 ~l~~~l~~F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~l 107 (415)
++...+..|+....-.++-..-.++.-+.| .+++.|+-.+-.+...+..++++++.+ |+.|++++......|.+..
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D--~~Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD--RIGFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHH
Confidence 444555566666666666555555544433 467888877767777888899999999 9999999987776664444
Q ss_pred HHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 014982 108 LVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 187 (415)
Q Consensus 108 l~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~s 187 (415)
++.+. .. + .| ... +......+-+-....
T Consensus 86 ~~~~~----a~--------------------------~-------------~~-----~li----~~r~l~G~g~~~~~~ 113 (495)
T PRK14995 86 LAAAF----SP--------------------------T-------------AS-----WLI----ATRALLAIGAAMIVP 113 (495)
T ss_pred HHHHH----cC--------------------------C-------------HH-----HHH----HHHHHHHHHHHHHHH
Confidence 33321 10 0 11 111 122222222111222
Q ss_pred HHHHHHHhhc-CccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 188 STWARVIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 188 lFWsfandif-~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.--....+.+ +.+|--|.+|+.+++.++|..+|+.++..+. ..|
T Consensus 114 ~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 114 ATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 2222344555 5566667899999999999999999988876 445
No 49
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.05 E-value=0.013 Score=60.72 Aligned_cols=47 Identities=11% Similarity=-0.104 Sum_probs=34.1
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLL 108 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll 108 (415)
.+..-++.....+...+..++.+++.| |+.|++++......+++..+
T Consensus 62 ~~~~g~~~~~~~i~~~~~~~~~G~l~D--r~g~k~~l~~~~~~~~i~~~ 108 (452)
T PRK11273 62 RGDLGFALSGISIAYGFSKFIMGSVSD--RSNPRVFLPAGLILAAAVML 108 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhh--ccCCchhHHHHHHHHHHHHH
Confidence 445555556667788888999999999 99999987665554443333
No 50
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.04 E-value=0.014 Score=57.53 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhhhh-----hhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHH
Q 014982 37 FFFILSAYFVVLPL-----RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVL 98 (415)
Q Consensus 37 ~F~Il~~y~iLRpi-----rDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~ 98 (415)
.|+...++.+..|. +|++.. ..+.+.++.........+..++.+++.| |+.|||.+..
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~D--r~g~r~~~~~ 68 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRA--RPAMIGLFYTGSAIVGIAVSQLLATRSD--YQGDRKGLIL 68 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCchHHHH
Confidence 45555566666663 443333 2455667666666777888999999999 9998886543
No 51
>PRK03699 putative transporter; Provisional
Probab=98.02 E-value=0.016 Score=58.72 Aligned_cols=148 Identities=11% Similarity=0.011 Sum_probs=80.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHH
Q 014982 27 TSALLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (415)
Q Consensus 27 ~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~ 104 (415)
.+.++..++.+|+--......-++-+++.-+. +.++..++.........+..++.+++.+ |++|||.+......+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d--r~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLME--IIPLKRQLIFGFALMI 83 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHH
Confidence 33344444444444343444444333333332 3445666655666777888899999999 9999998755443332
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHH
Q 014982 105 VSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLI 184 (415)
Q Consensus 105 ~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~ 184 (415)
+..++ ..... + .| .+. +......+..-.
T Consensus 84 i~~~l----~~~~~-----~----------------------------------~~-----~~~----~~~~l~G~~~g~ 111 (394)
T PRK03699 84 LAVAG----LMFSH-----S----------------------------------LA-----LFS----IAMFVLGVVSGI 111 (394)
T ss_pred HHHHH----HHHcc-----h----------------------------------HH-----HHH----HHHHHHHHhhHh
Confidence 22111 11110 0 11 010 111122222222
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.....+..+.|.++.++--+..++...+..+|+.+++.+...+.
T Consensus 112 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 112 TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23355677888887766556677777888888888887766553
No 52
>PRK12382 putative transporter; Provisional
Probab=97.90 E-value=0.015 Score=58.53 Aligned_cols=151 Identities=7% Similarity=0.043 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHhhh-----hhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHH
Q 014982 30 LLHSSSCFFFILSAYFVVLP-----LRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (415)
Q Consensus 30 ~l~~~l~~F~Il~~y~iLRp-----irDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~ 104 (415)
++...+..|+...+..+.-| +++++.++ .+.+-.+..+......+..++.|++.| |+.|||++......+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s--~~~~g~~~s~~~~~~~i~~~~~G~l~D--r~g~r~~l~~~~~~~~ 92 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFG--NTMVGIAVGIQFLATVLTRGYAGRLAD--QYGAKRSALQGMLACG 92 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCc--HHHHHHHHHHHHHHHHHHhhhhhHHHH--hhcchHHHHHHHHHHH
Confidence 34444444555555555555 24444432 555666666778888889999999999 9999998765544333
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHH---HHHH
Q 014982 105 VSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLW---VALL 181 (415)
Q Consensus 105 ~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw---~~vf 181 (415)
+..+.+........ .. . ++ .| .+++. ..+-
T Consensus 93 ~~~~~~~~~~~~~~-~~-----------------------~---------~~--~~------------~l~~~r~l~G~~ 125 (392)
T PRK12382 93 LAGLAYLLAAILPV-SA-----------------------P---------FK--FA------------LLVVGRLILGFG 125 (392)
T ss_pred HHHHHHHhhhcccc-ch-----------------------h---------HH--HH------------HHHHHHHHHHHH
Confidence 32222222111100 00 0 00 01 11221 1111
Q ss_pred HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 182 NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 182 nl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.-.....--+.+.|.++.||-.|..++.+.+.+.|..+|+.++.++. ..|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 126 ESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 11111222345678888888888999999999999999998877765 444
No 53
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.90 E-value=0.048 Score=57.29 Aligned_cols=81 Identities=14% Similarity=0.076 Sum_probs=51.1
Q ss_pred hhcccCcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCc--CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhH
Q 014982 18 VFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKA 95 (415)
Q Consensus 18 ~~~~i~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~Ga--e~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl 95 (415)
..++.+++..+.+......+++.....+..-|.-+.+.-+.|. ++.-++....+....+..++.+++.+ |+.||+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~d--r~G~r~~ 103 (476)
T PLN00028 26 RLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCD--LYGPRYG 103 (476)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCChHH
Confidence 3455555556666666666666666666666655544333333 33445544556667777899999999 9999988
Q ss_pred HHHHH
Q 014982 96 LVLIH 100 (415)
Q Consensus 96 ~~~i~ 100 (415)
.....
T Consensus 104 ~~~~~ 108 (476)
T PLN00028 104 SAFLL 108 (476)
T ss_pred HHHHH
Confidence 75533
No 54
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.88 E-value=0.0077 Score=63.04 Aligned_cols=171 Identities=13% Similarity=0.138 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhc-CccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh---H-H-HHHHHHHHHHHHHHHHHHHhhhccC
Q 014982 186 ISSTWARVIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG---P-Y-LLLFAACLMELAAQSSKGIYKEIPR 258 (415)
Q Consensus 186 ~slFWsfandif-~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g---~-~-Lllvaa~ll~la~~~~~~L~~~~~~ 258 (415)
..=++++..|+. |.+|=-|+++....++++|+++++.++..+. .+| . . ....+.++..+...+..........
T Consensus 124 ~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e 203 (473)
T PRK10429 124 DIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHE 203 (473)
T ss_pred cchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcee
Confidence 335888999999 6888888899988999998888766544332 222 1 1 1111111111111111111111110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 259 RPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQK 338 (415)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~ 338 (415)
+ . ++ . +.+ + +++.|.+.++.++.++++|.++.+.+..+++.+...+..--.
T Consensus 204 ~---------~--~~--~--~~~----------~----~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~ 254 (473)
T PRK10429 204 V---------Y--SS--D--NQV----------S----AEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFA 254 (473)
T ss_pred c---------C--Cc--c--ccc----------c----ccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 0 0 00 0 000 0 011123689999999999999888877777765544432211
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHH
Q 014982 339 VTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYL 389 (415)
Q Consensus 339 ~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~ 389 (415)
.-..+....+++ ..+.+....++..++.+.+...+.+|+|-+.++..
T Consensus 255 ~y~~~y~~~~~~----~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~ 301 (473)
T PRK10429 255 IYYFTYVIGDAD----LFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAG 301 (473)
T ss_pred eeEEEEECCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 111111112322 23445555556667777666557899998888643
No 55
>PRK10133 L-fucose transporter; Provisional
Probab=97.87 E-value=0.049 Score=56.72 Aligned_cols=80 Identities=11% Similarity=0.016 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHH
Q 014982 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (415)
Q Consensus 29 ~~l~~~l~~F~Il~~y~iLRpirDsl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ 106 (415)
.+..+++++|..-+.....-++-..+--+. +.++..++-........+..++.+++.+ |+.|||.+......+++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~d--r~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMK--KLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHH
Confidence 445566666666665555444433332222 3445555555657778888999999999 999999998877766555
Q ss_pred HHHH
Q 014982 107 LLVF 110 (415)
Q Consensus 107 ll~F 110 (415)
.+++
T Consensus 105 ~~l~ 108 (438)
T PRK10133 105 AALF 108 (438)
T ss_pred HHHH
Confidence 5443
No 56
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.87 E-value=0.032 Score=56.17 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccc--CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHH
Q 014982 32 HSSSCFFFILSAYFVVLPLRDEGAISL--GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLV 109 (415)
Q Consensus 32 ~~~l~~F~Il~~y~iLRpirDsl~vs~--Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~ 109 (415)
..++-.|+...+..+.-|.-..+.-+. ..++.-++..+......+..++.+++.+ |+.|+|.+......+.+..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~d--r~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 10 LLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIK--RIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 333444555555555555544443333 3456677777778888899999999999 999999887655444333222
Q ss_pred HHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHH
Q 014982 110 FFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISST 189 (415)
Q Consensus 110 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slF 189 (415)
+.. ..+ .| ... +..+...+ ..+.+
T Consensus 88 ~~~--~~~-----------------------------------------~~-----~l~----~~~~l~G~----~~~~~ 111 (381)
T PRK03633 88 LGL--MVG-----------------------------------------FW-----SWL----AWRFVAGI----GCAMI 111 (381)
T ss_pred HHH--hcc-----------------------------------------HH-----HHH----HHHHHHHH----HHHHH
Confidence 211 111 11 000 11122222 11223
Q ss_pred HH----HHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 190 WA----RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 190 Ws----fandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
|. ..+|..+.+|-.|-++....+.++|..+|+.+...+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 112 WVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 32 2456666677778899999999999999998887765
No 57
>PRK11462 putative transporter; Provisional
Probab=97.87 E-value=0.041 Score=57.68 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC-ccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 174 FFLWVALLNLITISSTWARVIDVMD-SESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 174 FYiw~~vfnl~~~slFWsfandif~-~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.|+.-.+.-.+..-=+|++..++++ .+|--++.+.-..|+++|+.+++.++..+.
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443333323333478999999988 445558999999999999988887765543
No 58
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.78 E-value=0.03 Score=57.53 Aligned_cols=115 Identities=6% Similarity=0.002 Sum_probs=72.6
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccc
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSS 139 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (415)
.+++-++.........+..++.+++.+ |++|||++......+.+..+...+ ..+
T Consensus 42 ~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~G~r~~~~~~~~~~~~~~~~~~~--~~~---------------------- 95 (412)
T TIGR02332 42 ATMFGLAATLFYAAYVICGIPSNIMLA--IIGARRWIAGIMVLWGIASTATMF--ATG---------------------- 95 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHH--HhChHHHHHHHHHHHHHHHHHHHH--hcC----------------------
Confidence 344555555556667788889999999 999999875544443322222211 111
Q ss_pred cccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHH
Q 014982 140 NAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLF 219 (415)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~ 219 (415)
.|. .+ +......+..-.....-...++|.++.+|-.|..++...+..+|.++
T Consensus 96 -------------------~~~----l~-----~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 147 (412)
T TIGR02332 96 -------------------PES----LY-----LLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL 147 (412)
T ss_pred -------------------HHH----HH-----HHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 110 11 22233333333233455567899999888778899999999999999
Q ss_pred hHHHHHHHH
Q 014982 220 GSLFAAGMA 228 (415)
Q Consensus 220 Gg~l~~~la 228 (415)
|+.+...+.
T Consensus 148 ~~~~~~~l~ 156 (412)
T TIGR02332 148 GLILSGYIL 156 (412)
T ss_pred HHHHHHHHH
Confidence 998877664
No 59
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.77 E-value=0.0032 Score=63.38 Aligned_cols=114 Identities=13% Similarity=0.067 Sum_probs=73.4
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccc
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSS 139 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (415)
.....++.........+..++.+++.+ |+.||+.+......+.+..++..+ .....
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d--~~grr~~~~~~~~~~~~~~~~~~~--~~~~~-------------------- 125 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSD--RFGRKKSLLIIALLFVIGAILMGL--AAFAL-------------------- 125 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhh--hhhhHHHHHHHHHHHHHHHHHHHH--hcccc--------------------
Confidence 445666666778888999999999999 999999876555444322222211 01100
Q ss_pred cccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHH
Q 014982 140 NAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLF 219 (415)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~ 219 (415)
+ .| .+. +......+-.-.........++|.++.+|-.+..++...+.++|.++
T Consensus 126 -----~-------------~~-----~~~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 126 -----S-------------VE-----MLI----VGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV 178 (481)
T ss_pred -----c-------------hH-----HHH----HHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH
Confidence 0 01 111 11112222222233456778999999999889999999999999999
Q ss_pred hHHHH
Q 014982 220 GSLFA 224 (415)
Q Consensus 220 Gg~l~ 224 (415)
|+.+.
T Consensus 179 ~~~~~ 183 (481)
T TIGR00879 179 AYGFG 183 (481)
T ss_pred HHHHH
Confidence 99887
No 60
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.76 E-value=0.042 Score=54.49 Aligned_cols=122 Identities=9% Similarity=0.029 Sum_probs=71.2
Q ss_pred hhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhh
Q 014982 49 PLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESV 128 (415)
Q Consensus 49 pirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~ 128 (415)
+++|+..+ ..++.-++.........+..++.+++.+ |++|||.+......+.+..+. ....
T Consensus 25 ~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~~~~~~~~-----~~~~---------- 85 (355)
T TIGR00896 25 QIRSALGM--SFSVAGLLTALPVLCFAVLAPLAPWLAR--RFGEERSVAAGLLLIAAGILI-----RSAP---------- 85 (355)
T ss_pred HHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHH--HhCchHHHHHHHHHHHHHHHH-----HHhc----------
Confidence 34444433 3445566666667888899999999999 999999876544332221111 1110
Q ss_pred hhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH
Q 014982 129 SHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGF 208 (415)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygl 208 (415)
+ .|. +. +.-....+..-.........+.|.++ ++..|..++
T Consensus 86 ----------------~-------------~~~-----l~----~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (355)
T TIGR00896 86 ----------------G-------------TAL-----LF----AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGL 126 (355)
T ss_pred ----------------c-------------HHH-----HH----HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHH
Confidence 0 110 00 01111111111122234456778775 566778999
Q ss_pred HHHHHhHHHHHhHHHHHHHH
Q 014982 209 IGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 209 i~aGg~lG~I~Gg~l~~~la 228 (415)
.+.+.++|..+|+.+...+.
T Consensus 127 ~~~~~~~g~~i~~~~~~~l~ 146 (355)
T TIGR00896 127 YSMALMGGAALAAAATVPLA 146 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988877665
No 61
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.74 E-value=0.045 Score=55.08 Aligned_cols=157 Identities=14% Similarity=0.073 Sum_probs=91.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHH
Q 014982 27 TSALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (415)
Q Consensus 27 ~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF 103 (415)
.+++..+.+..|....++.+..|+=.....+ .| .+.+.++.........+..++.|++.| |++|||++......+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~D--r~g~r~~l~~~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYAD--TLGPKKAVVFGLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHh--ccCCcchHHHHHHHH
Confidence 3466667777777777777777654433222 33 555666666667888889999999999 999999987655444
Q ss_pred HHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHH---HHHH
Q 014982 104 SVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFL---WVAL 180 (415)
Q Consensus 104 ~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYi---w~~v 180 (415)
.+..+...+..... .|.. |.+. .+++ ...+
T Consensus 92 ~~~~~~~~~~~~~~-----------------------------------------~~~~--~~~~----~l~~~r~l~G~ 124 (399)
T PRK05122 92 ALSGLLYLLAGLLA-----------------------------------------AWPV--LSLL----LLLLGRLLLGI 124 (399)
T ss_pred HHHHHHHHHhhhhh-----------------------------------------ccch--hHHH----HHHHHHHHHHh
Confidence 33222222111100 0100 0000 1111 1111
Q ss_pred HHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 181 LNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 181 fnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
..-.....--..++|.++.||-.|..++.+.+.++|.++|+.++..+. ..|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 177 (399)
T PRK05122 125 GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGL 177 (399)
T ss_pred hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccH
Confidence 111111112234567787777777899999999999999998877765 4553
No 62
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.72 E-value=0.074 Score=54.18 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=35.4
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 189 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 189 FWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
-+..++|.++.+|-.|..++...|.++|.++|+.+...+. ..|
T Consensus 99 ~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g 142 (368)
T TIGR00903 99 AFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG 142 (368)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 3455678888888889999999999999999998877776 445
No 63
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.71 E-value=0.086 Score=54.70 Aligned_cols=153 Identities=14% Similarity=0.130 Sum_probs=93.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCc--CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 25 HETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 25 ~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~Ga--e~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
+..+.+....+..|+....+...-+.-+.+.-+.|. ++.-++.........+..++.+++.+ |+.|+|.+......
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGD--RYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHH
Confidence 334444455555566666666666655554434443 34555555557777788899999999 99999987655443
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHH
Q 014982 103 FSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLN 182 (415)
Q Consensus 103 F~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfn 182 (415)
+.+..++..+ ..+ .| .+. ++..+..+..
T Consensus 95 ~~~~~~~~~~--~~~-----------------------------------------~~-----~l~----~~~~l~G~~~ 122 (496)
T PRK03893 95 FSVGTLACGF--APG-----------------------------------------YW-----TLF----IARLVIGMGM 122 (496)
T ss_pred HHHHHHHHHH--HhH-----------------------------------------HH-----HHH----HHHHHHHHHH
Confidence 3222222211 111 11 111 2333333332
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
-.........+.|.++.++-.|..++...+.++|.++|+.+...+. ..|
T Consensus 123 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 172 (496)
T PRK03893 123 AGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 2333445677899999988888999999999999999998877765 444
No 64
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.60 E-value=0.13 Score=53.69 Aligned_cols=274 Identities=18% Similarity=0.157 Sum_probs=157.3
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhh----hhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHH
Q 014982 23 HPHETSALLHSSSCFFFILSAYFVVL----PLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVL 98 (415)
Q Consensus 23 ~~~E~~~~l~~~l~~F~Il~~y~iLR----pirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~ 98 (415)
++....+++.+++.-|++-..=++.- |+.+++.++ ...--++-+.......+..|+-+.+.+ |++|||++-.
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs--~~~aG~lis~yAl~~ai~ap~l~~lt~--r~~Rr~lLl~ 83 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVS--EGAAGQLITAYALGVALGAPLLALLTG--RLERRRLLLG 83 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHc--ccchHHHHHH
Confidence 45566688889999999988877655 455555554 112234444556777788899999999 9999999988
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHH
Q 014982 99 IHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWV 178 (415)
Q Consensus 99 i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~ 178 (415)
....|++.-++-++. ++. | .+. ++|+. .
T Consensus 84 ~l~lFi~~n~l~alA--p~f-----------------------------------------~-----~Ll-~aR~~---~ 111 (394)
T COG2814 84 LLALFIVSNLLSALA--PSF-----------------------------------------A-----VLL-LARAL---A 111 (394)
T ss_pred HHHHHHHHHHHHHHh--ccH-----------------------------------------H-----HHH-HHHHH---H
Confidence 887776655544331 111 1 000 11111 1
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-H-HHHHHHHHHHHHHHHHHHHhhh
Q 014982 179 ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-Y-LLLFAACLMELAAQSSKGIYKE 255 (415)
Q Consensus 179 ~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~-Lllvaa~ll~la~~~~~~L~~~ 255 (415)
.+=-=...++-...+.++-+.++--|--+++..|-+++.++|..+.+++. .+|- . ...++.+ +.++...+.+.
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l----~ll~~~~~~~~ 187 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVL----ALLALLLLWKL 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHH----HHHHHHHHHHh
Confidence 11001122344456789999999999999999999999999999999987 6673 2 2333222 22233333333
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014982 256 IPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFY 335 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~ 335 (415)
.+++ ++ . + +++ .++.+ .-.++|+|-++...+...+. .+..+.-
T Consensus 188 lP~~------------~~--~--~-----------------~~~--~~~~~-~~~~l~~p~v~~~l~~t~l~-~~g~F~~ 230 (394)
T COG2814 188 LPPS------------EI--S--G-----------------SLP--GPLRT-LLRLLRRPGVLLGLLATFLF-MTGHFAL 230 (394)
T ss_pred CCCc------------cC--C--C-----------------CCC--cchhH-HHHHhcCchHHHHHHHHHHH-Hcchhhh
Confidence 3310 00 0 0 000 12222 33455666555544443333 3334444
Q ss_pred HHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHHHHHHHHHH
Q 014982 336 FQKVT-VIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYLMFYLLVTM 397 (415)
Q Consensus 336 f~~~~-~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~m~~~~~~~ 397 (415)
|.+-+ .+++...= ..+..+.+-...|+..++-.++++.+.+| |.+.++..++.++...
T Consensus 231 ftYi~P~L~~v~g~---s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 231 YTYIRPFLESVAGF---SVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALA 289 (394)
T ss_pred HHhHHHHHHHccCC---CHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHH
Confidence 43332 33333320 22345556667777777777777667888 8888877665444433
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.59 E-value=0.054 Score=53.11 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=31.4
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
..+.|.++.+|-.+..++...|..+|.++|+.+...+.
T Consensus 119 ~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 119 LYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred HHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778888888888999999999999999988766553
No 66
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.58 E-value=0.063 Score=55.54 Aligned_cols=41 Identities=20% Similarity=0.270 Sum_probs=36.1
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.--..++|.++.+|--+..++..+|.++|.++|+.+...+.
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~ 191 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC 191 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44466889999999999999999999999999999988776
No 67
>TIGR00898 2A0119 cation transport protein.
Probab=97.57 E-value=0.018 Score=60.10 Aligned_cols=113 Identities=16% Similarity=0.017 Sum_probs=72.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccc
Q 014982 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNA 141 (415)
Q Consensus 62 ~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (415)
...++........++..++.+++.+ |+.|++++........+.. ++.....
T Consensus 128 ~~~~~~s~~~~g~~~g~~~~g~l~D--r~Grr~~~~~~~~~~~i~~----~~~~~~~----------------------- 178 (505)
T TIGR00898 128 KVDLTQSCFFVGVLLGSFVFGYLSD--RFGRKKVLLLSTLVTAVSG----VLTAFSP----------------------- 178 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhh--hccchHHHHHHHHHHHHHH----HHHHHcc-----------------------
Confidence 3445555557778888899999999 9999998765443332221 1212111
Q ss_pred cCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhH
Q 014982 142 KEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGS 221 (415)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg 221 (415)
+ .| .+. ++.....+..-......+..+.|.++.++-.+..++...+..+|.++++
T Consensus 179 ---~-------------~~-----~~~----~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~ 233 (505)
T TIGR00898 179 ---N-------------YT-----VFL----VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLP 233 (505)
T ss_pred ---c-------------HH-----HHH----HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHH
Confidence 0 11 111 2333333333334556778899999999888899999999999999988
Q ss_pred HHHHHHH
Q 014982 222 LFAAGMA 228 (415)
Q Consensus 222 ~l~~~la 228 (415)
.++..+.
T Consensus 234 ~~~~~~~ 240 (505)
T TIGR00898 234 LVAYFIP 240 (505)
T ss_pred HHHHHhh
Confidence 7765443
No 68
>PRK09669 putative symporter YagG; Provisional
Probab=97.55 E-value=0.046 Score=56.42 Aligned_cols=41 Identities=20% Similarity=0.089 Sum_probs=30.9
Q ss_pred HHHHHHHhhc-CccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 188 STWARVIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 188 lFWsfandif-~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
-++++..|++ |.+|=.|+.+.-..++++|+.+++.+...+.
T Consensus 129 p~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 129 PYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred hHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899988 4566566888889999999888876654443
No 69
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.51 E-value=0.16 Score=52.48 Aligned_cols=144 Identities=10% Similarity=0.055 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHH
Q 014982 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (415)
Q Consensus 29 ~~l~~~l~~F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ 106 (415)
++..+...+|+.-+.+.+.-|+-..+--..| ..+..++.........+..++-+++.+ |+.|||.+..-...+++.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~--r~G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMK--KLSYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHHHHHHH
Confidence 3555666777777776666555544433333 334455555667778888899999999 999999887655554333
Q ss_pred HHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHH
Q 014982 107 LLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 186 (415)
Q Consensus 107 ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~ 186 (415)
.+++.. .... ++ -| .+.+ .....=+-.
T Consensus 82 ~~l~~~--~~~~-------------------------~~-------------~~------------~~l~-~~~l~G~g~ 108 (410)
T TIGR00885 82 AFLFWP--AAEI-------------------------MN-------------YT------------LFLV-GLFILTAGL 108 (410)
T ss_pred HHHHHH--HHhh-------------------------cc-------------HH------------HHHH-HHHHHHhhH
Confidence 332211 1000 00 01 1111 111111123
Q ss_pred HHHHH----HHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 187 SSTWA----RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 187 slFWs----fandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
..++. .+++..+.++..|-.++...+.++|..+|+.+...+
T Consensus 109 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 109 GFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443 355677777777888888888888888888776655
No 70
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.51 E-value=0.17 Score=52.79 Aligned_cols=40 Identities=10% Similarity=-0.073 Sum_probs=30.0
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
+.+.+.|+ ++=-|-.|+..+|..+|+.+|+.+...+. ..|
T Consensus 131 ~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 131 TMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 56678885 44446689999999999999988877665 445
No 71
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.41 E-value=0.12 Score=53.33 Aligned_cols=82 Identities=11% Similarity=-0.019 Sum_probs=46.7
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcH
Q 014982 308 LRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLG----RRRLLAEINSFIAVFILAGQLTLTYAACRLGF 383 (415)
Q Consensus 308 ~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~----~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~ 383 (415)
.+.++|+|-+....+..++.+......+.......++..-+++. -.+-.|......++..++.+++...+.+|+|-
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 44577777765555555555444434332222223332111111 12445666677777777888776668899999
Q ss_pred HHHHHH
Q 014982 384 AMFFYL 389 (415)
Q Consensus 384 ~~~l~~ 389 (415)
+.++.+
T Consensus 281 r~~l~~ 286 (418)
T TIGR00889 281 KKVMLL 286 (418)
T ss_pred HHHHHH
Confidence 888654
No 72
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.39 E-value=0.2 Score=50.91 Aligned_cols=49 Identities=12% Similarity=0.069 Sum_probs=37.0
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVF 110 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F 110 (415)
.++.-++.........+..+..+++.+ |+.|||++..-...+++..+..
T Consensus 43 ~~~~g~~~s~~~~~~~l~~~~~g~l~d--r~G~r~~l~~~~~l~~~~~~~~ 91 (393)
T PRK09705 43 FSVAALLTALPVVTMGGLALAGSWLHQ--HVSERRSVAISLLLIAVGALMR 91 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH--HhCchHHHHHHHHHHHHHHHHH
Confidence 444556555557778888999999999 9999999988777665555543
No 73
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.36 E-value=0.049 Score=59.85 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=36.5
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.+-...+.|.++.++.-+..+++.++..+|..+|+.+...+.
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 355678999999999999999999999999999988877765
No 74
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.33 E-value=0.0078 Score=61.86 Aligned_cols=181 Identities=13% Similarity=0.108 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC-ccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh-----HHHHHHHHHHHHHH
Q 014982 173 GFFLWVALLNLITISSTWARVIDVMD-SESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG-----PYLLLFAACLMELA 245 (415)
Q Consensus 173 ~FYiw~~vfnl~~~slFWsfandif~-~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g-----~~Lllvaa~ll~la 245 (415)
+.|+..++...+...-+++..+|+++ .+|-.|+.+.-..++.+|.++.+.+...+. ..| ......+.+...++
T Consensus 108 ~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~ 187 (428)
T PF13347_consen 108 VFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVG 187 (428)
T ss_pred HHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHH
Confidence 34443355444455577888999997 467788899999999999876665555443 333 11111111111112
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHH
Q 014982 246 AQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLW 325 (415)
Q Consensus 246 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~ 325 (415)
..+..........+ .+ + . + +++.+.+.++.++.++|+|++..+.+...
T Consensus 188 ~v~~~i~~~~~ke~---------~~-~---~--~-----------------~~~~~~~~~~~~~~~~~nr~~~~l~~~~~ 235 (428)
T PF13347_consen 188 LVFFLITFFFVKER---------SV-E---V--T-----------------EQEKKISLRDSLRSLFRNRPFRILLLAFF 235 (428)
T ss_pred HHHhhhhhheeeec---------cc-c---c--c-----------------ccccccccccchhhhcccchHHHHHHHHH
Confidence 22211111111000 00 0 0 0 11112367888999999999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHH
Q 014982 326 LSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYL 389 (415)
Q Consensus 326 l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~ 389 (415)
+.....++.---..-..+....+++ ..+.+.....+.+++...+...+.||+|-+.++.+
T Consensus 236 ~~~~~~~~~~~~~~y~~~~vl~~~~----~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 236 LQWLAFALMNTFLPYYFTYVLGNEG----LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred HHHhhhhhhhhHHHHHHHHHhcCch----hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 7655444332222222444444443 33444446666666666666558899999887643
No 75
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.30 E-value=0.048 Score=55.52 Aligned_cols=67 Identities=13% Similarity=0.115 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-H-HHHHHHHHHHHHHHHHHH
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-Y-LLLFAACLMELAAQSSKG 251 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~-Lllvaa~ll~la~~~~~~ 251 (415)
.....+..+.|.++.+..-|.+|+.++..++|..+|+.+...+. ..|. . .+..+++.+.+++.+...
T Consensus 329 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 329 SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 34467788999999888899999999999999999998888876 5564 3 344444444444444343
No 76
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.27 E-value=0.32 Score=51.91 Aligned_cols=163 Identities=13% Similarity=0.117 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcccCc--CchhhHHHHHHHHHHHHHHHHHHHhcCCC----CCchhHHHHHHHH
Q 014982 29 ALLHSSSCFFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPN----LSKAKALVLIHRF 102 (415)
Q Consensus 29 ~~l~~~l~~F~Il~~y~iLRpirDsl~vs~Ga--e~LP~l~~~t~~~~ll~~~lys~L~~~~r----~sr~rl~~~i~~f 102 (415)
+++......+-+-++|.+.-+.-.......|. .....++....+..++..|+.|+++| | +.|||.+-.....
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSD--r~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSD--RCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhc--CCCCCCCChHHHHHHHHH
Confidence 44455555556666665555544443333343 45666677778999999999999998 6 9999988654433
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHH
Q 014982 103 FSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLN 182 (415)
Q Consensus 103 F~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfn 182 (415)
..+ +.+. ++....+ +.+. ..|+.. ..+ ..|. -|.+. +.+...+..+
T Consensus 83 ~~~--~~l~-ll~~~~~--------~~~~----------~~~~~~------~~~-~~~~--i~~~~----i~~~lld~~~ 128 (477)
T TIGR01301 83 LVA--FAVI-LIGFAAD--------IGHL----------FGDNLD------KKT-KPRA--IIVFV----VGFWILDVAN 128 (477)
T ss_pred HHH--HHHH-HHHhCch--------hhhh----------cccccc------ccc-hhHH--HHHHH----HHHHHHHHHH
Confidence 311 1111 1111110 0000 000000 000 0110 01111 1222223333
Q ss_pred HHHHHHHHHHHHhhcCccch--hHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 183 LITISSTWARVIDVMDSESG--SRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 183 l~~~slFWsfandif~~~eA--KRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
-....-+-+++.|.++.+|= ++-++..+...++|+++|+.+....
T Consensus 129 n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 129 NMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444668899999998864 4679998888888888888776654
No 77
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.17 E-value=0.64 Score=52.30 Aligned_cols=127 Identities=10% Similarity=0.013 Sum_probs=80.9
Q ss_pred HhhhhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccch
Q 014982 46 VVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKL 125 (415)
Q Consensus 46 iLRpirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~ 125 (415)
++-++.+.+.++ .+...++-.+..+.+++..++.+++.+ |+.|++.+.+....+.+..++ ..+.. +
T Consensus 189 ilp~i~~~~gls--~~~~g~l~s~~~lG~iiG~li~G~LsD--R~GRR~~lii~lil~~i~~ll----~afa~-----s- 254 (742)
T TIGR01299 189 VLPSAEKDLCIP--DSGKGMLGLIVYLGMMVGAFFWGGLAD--KLGRKQCLLICLSVNGFFAFF----SSFVQ-----G- 254 (742)
T ss_pred HHHHHHHHhCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHHHHH----HHHHh-----h-
Confidence 334444444432 445666666668888899999999999 999999987655444332222 22211 0
Q ss_pred hhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHH
Q 014982 126 ESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRL 205 (415)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRl 205 (415)
.| .+. ++-....+..-.....-...+.|.++.++-.+.
T Consensus 255 ---------------------------------~~-----~ll----v~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~ 292 (742)
T TIGR01299 255 ---------------------------------YG-----FFL----FCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEH 292 (742)
T ss_pred ---------------------------------HH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 01 111 122223333223345777889999998888889
Q ss_pred HHHHHHHHhHHHHHhHHHHHHHH
Q 014982 206 FGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 206 ygli~aGg~lG~I~Gg~l~~~la 228 (415)
++.+.++..+|+++++.++..+.
T Consensus 293 ~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 293 LSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987765543
No 78
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.16 E-value=0.47 Score=50.46 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=29.8
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHH
Q 014982 189 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 226 (415)
Q Consensus 189 FWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~ 226 (415)
--..+++.|+.+|--|-.|+...+|++|..+++.++..
T Consensus 148 ~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 148 SMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 33458899999988899999988888888877665543
No 79
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.16 E-value=0.19 Score=53.39 Aligned_cols=151 Identities=14% Similarity=0.078 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcc-cCcCc--hhhHHHHHHHHHHHHHHHHHHHhcCCC-CCchhHHHHHHHHHH
Q 014982 29 ALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLSK--LPGLFVGSLILTLIAAPVSTLIFSLPN-LSKAKALVLIHRFFS 104 (415)
Q Consensus 29 ~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~Gae~--LP~l~~~t~~~~ll~~~lys~L~~~~r-~sr~rl~~~i~~fF~ 104 (415)
.+..++...+|.-++||..++.--.-..+ .|.+. ..++.......+....++.+++.+ | ++|+|.+..-...+.
T Consensus 22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaD--r~~G~r~~~~~g~~~~~ 99 (500)
T PRK09584 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGD--KVLGTKRVIMLGAIVLA 99 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccchHHHHHHHHHHHH
Confidence 46666677788888888888752222212 33322 233333323334444568999999 9 599988765544443
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHH
Q 014982 105 VSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLI 184 (415)
Q Consensus 105 ~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~ 184 (415)
+..+++ ..... . .+. .+ +..+...+.+-+
T Consensus 100 ig~~l~----~~~~~-------------------------~-------------~~~----l~-----~~~~l~gig~g~ 128 (500)
T PRK09584 100 IGYALV----AWSGH-------------------------D-------------AGI----VY-----MGMATIAVGNGL 128 (500)
T ss_pred HHHHHH----HHhcc-------------------------c-------------HHH----HH-----HHHHHHHHhhhc
Confidence 222221 11100 0 010 00 111111111111
Q ss_pred HHHHHHHHHHhhcCccchh--HHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 185 TISSTWARVIDVMDSESGS--RLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 185 ~~slFWsfandif~~~eAK--Rlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
....-=++.+|.|+.++.+ +-+++...+.++|+.+|+.+..++. ..|-
T Consensus 129 ~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~ 179 (500)
T PRK09584 129 FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGW 179 (500)
T ss_pred ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCH
Confidence 1122235689999877655 3789999999999999999988876 4563
No 80
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.12 E-value=0.034 Score=56.02 Aligned_cols=44 Identities=20% Similarity=0.141 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.....+..++|.++.++.-|..|+....+.+|+.+|+.+...+.
T Consensus 325 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 325 GQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred HHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 34577889999999999999999999999999999999888775
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.09 E-value=0.2 Score=52.88 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcc---cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCC-CCchhHHHHHHHHHH
Q 014982 31 LHSSSCFFFILSAYFVVLPLRDEGAIS---LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPN-LSKAKALVLIHRFFS 104 (415)
Q Consensus 31 l~~~l~~F~Il~~y~iLRpirDsl~vs---~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r-~sr~rl~~~i~~fF~ 104 (415)
...+...++--++||...|.=-....+ .| ..+.-++.........+..++-+++.+ | ++|+|.+........
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laD--r~~G~~~~l~~~~~~~~ 90 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGD--RVWGTKKTMVLGGIVLM 90 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH--hhcchHHHHHHHHHHHH
Confidence 334445566677777766642222211 12 223334444446667788888899999 9 899998766554443
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHH---HHH
Q 014982 105 VSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWV---ALL 181 (415)
Q Consensus 105 ~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~---~vf 181 (415)
+..+++. ... + .| .+++-. .+-
T Consensus 91 ~g~~~~~----~~~--------------------------~-------------~~------------~~~~~~~l~g~g 115 (475)
T TIGR00924 91 LGHFMLA----MSI--------------------------Y-------------PD------------LIFYGLGTIAVG 115 (475)
T ss_pred HHHHHHH----hcc--------------------------c-------------Hh------------HHHHHHHHHHhc
Confidence 3222221 110 0 01 111111 111
Q ss_pred HHHHHHHHHHHHHhhcCccc-hhH--HHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 182 NLITISSTWARVIDVMDSES-GSR--LFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 182 nl~~~slFWsfandif~~~e-AKR--lygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
+-......-.+.+|.++.+| .+| .|++...+.|+|+.+|+.+...+. ..|.
T Consensus 116 ~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 116 SGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred cccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 11111233567889998876 444 899999999999999999988776 4553
No 82
>PRK09848 glucuronide transporter; Provisional
Probab=96.97 E-value=0.5 Score=48.77 Aligned_cols=83 Identities=7% Similarity=-0.008 Sum_probs=45.8
Q ss_pred chHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHh
Q 014982 303 AILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVF-ILAGQLTLTYAACRL 381 (415)
Q Consensus 303 ~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~-tl~~qlf~t~iirrl 381 (415)
+..+.++.++|+|.+....+..+++............-..++.+.++++. +.+....+.+ .++.+.+...+.+|+
T Consensus 216 ~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~l~~~l~~r~ 291 (448)
T PRK09848 216 SLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF----TVLVLVQNLVGTVASAPLVPGMVARI 291 (448)
T ss_pred CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH----HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56788999999999988777666665443333221111223333444332 3232333333 333444444478999
Q ss_pred cHHHHHHH
Q 014982 382 GFAMFFYL 389 (415)
Q Consensus 382 G~~~~l~~ 389 (415)
|-+..+.+
T Consensus 292 g~~~~~~~ 299 (448)
T PRK09848 292 GKKNTFLI 299 (448)
T ss_pred CcHHHHHH
Confidence 98877643
No 83
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.96 E-value=0.056 Score=44.60 Aligned_cols=46 Identities=24% Similarity=0.412 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
-......+..+.|.++.++-.+.++....+.++|..+|+.+...+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 66 AFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred HHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 3345578889999999999999999999999999999998887765
No 84
>PRK03893 putative sialic acid transporter; Provisional
Probab=96.89 E-value=0.049 Score=56.49 Aligned_cols=45 Identities=20% Similarity=0.149 Sum_probs=38.0
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
++...+.|.++.++.-+.+++....+++|+.+|+.+...+. ..|.
T Consensus 386 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~ 431 (496)
T PRK03893 386 LLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDL 431 (496)
T ss_pred hhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCCh
Confidence 45567889999999999999999999999999999888876 5553
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.83 E-value=0.067 Score=56.82 Aligned_cols=148 Identities=12% Similarity=0.054 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCC-CCchhHHHHHHHHH
Q 014982 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPN-LSKAKALVLIHRFF 103 (415)
Q Consensus 28 ~~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r-~sr~rl~~~i~~fF 103 (415)
+.+...+..-++--++||..++.=-.-..+ .| .+...++..+-.....+..++.|++.| | +.|+|.+.+-...|
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laD--r~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGD--HLLGTKRTIVLGAIVL 91 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhh--hccchHHHHHHHHHHH
Confidence 345555566677778888887743322222 23 334455544445566677788999999 9 99999998776666
Q ss_pred HHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHH---HHHH
Q 014982 104 SVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFL---WVAL 180 (415)
Q Consensus 104 ~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYi---w~~v 180 (415)
.+..+..++ .... .. .+++ ...+
T Consensus 92 ~~g~~~~~~--~~~~----------------------------------------~~------------ll~~~~~l~~i 117 (489)
T PRK10207 92 AIGYFMTGM--SLLK----------------------------------------PD------------LIFIALGTIAV 117 (489)
T ss_pred HHHHHHHHH--hccc----------------------------------------hh------------HHHHHHHHHHh
Confidence 443322221 1000 00 1111 1111
Q ss_pred HHHHHHHHHHHHHHhhcCccchhH--HHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 181 LNLITISSTWARVIDVMDSESGSR--LFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 181 fnl~~~slFWsfandif~~~eAKR--lygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
-+-.....-=.+..|.|+.++.|| -|+..+.+.|+|..+|+.++.++. .+|
T Consensus 118 g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 118 GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 110010001156889998886544 799999999999999999988887 556
No 86
>PRK09952 shikimate transporter; Provisional
Probab=96.74 E-value=0.9 Score=47.01 Aligned_cols=39 Identities=8% Similarity=0.045 Sum_probs=30.0
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
...++|.++.++-.+..+....|..+|.++|+.+...+.
T Consensus 147 ~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~ 185 (438)
T PRK09952 147 ALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLIS 185 (438)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899998887556778888888888888877665554
No 87
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=96.73 E-value=0.14 Score=57.46 Aligned_cols=47 Identities=15% Similarity=0.246 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHh
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLG 231 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g 231 (415)
.....+..+.|++++++--+-+|+.++++.+|+++|+.+...+...+
T Consensus 665 ~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~ 711 (742)
T TIGR01299 665 AWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT 711 (742)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34467788999999998888999999999999999998877665333
No 88
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.72 E-value=1.1 Score=47.95 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=35.0
Q ss_pred HHHHhhcCccchhH--HHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 191 ARVIDVMDSESGSR--LFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 191 sfandif~~~eAKR--lygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
++++|.|+.++.+| -|++...++++|+.+|+.++.++. ..|
T Consensus 123 alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G 166 (493)
T PRK15462 123 CLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS 166 (493)
T ss_pred HHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 56899999887777 499999999999999999988886 455
No 89
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.64 E-value=0.39 Score=48.32 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=39.8
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHH
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKG 251 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~ 251 (415)
..+.|.++.++--|.+|+.+.+.++|..+|+.+...+. ..|. ....+.+++..++..+...
T Consensus 325 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 325 VEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 44567787777788999999999999988887777665 4553 3332333333344444443
No 90
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.57 E-value=0.07 Score=52.34 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcc-cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHH
Q 014982 30 LLHSSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (415)
Q Consensus 30 ~l~~~l~~F~Il~~y~iLRpirDsl~vs-~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ 106 (415)
++......++....++...+.--..... .| .+...++.........+..++.+++.+ |++|++.+........+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSD--RIGRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH--HhchHHHHHHHHHHHHHH
Confidence 5555555555555554443322222211 22 334444444456667788889999999 999998765433322111
Q ss_pred HHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHH
Q 014982 107 LLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITI 186 (415)
Q Consensus 107 ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~ 186 (415)
.+.+ ....... ++ .|. . ....+......-...
T Consensus 299 ~~~~--~~~~~~~------------------------~~-------------~~~-----~----~~~~~~~g~~~~~~~ 330 (394)
T TIGR00883 299 AVPL--LMALLDS------------------------GS-------------FTL-----F----FFLVLGLALIGGMYT 330 (394)
T ss_pred HHHH--HHHHhcC------------------------Cc-------------hHH-----H----HHHHHHHHHHHHHHh
Confidence 1111 1111100 00 121 1 122233333333344
Q ss_pred HHHHHHHHhhcCccchhHHHHHH-HHHHhHHHHHhHHHHHHHH-HHh
Q 014982 187 SSTWARVIDVMDSESGSRLFGFI-GAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli-~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
...++.++|.++.++..|.+++. +.+..+|..+||.+...+. ..|
T Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 331 GPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred hhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 56789999999988877888874 4566678888888877765 455
No 91
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.40 E-value=1.3 Score=44.84 Aligned_cols=27 Identities=22% Similarity=0.249 Sum_probs=23.0
Q ss_pred HHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 206 FGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 206 ygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.++.+++.++|.++|+.++.++. .+|.
T Consensus 145 ~~~~~~~~~lg~~~g~~i~~~l~~~~gw 172 (393)
T PRK15011 145 SSFLRAQVSLAWVIGPPLAYALAMGFSF 172 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcCh
Confidence 47999999999999999998886 5664
No 92
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=96.40 E-value=0.16 Score=48.69 Aligned_cols=150 Identities=15% Similarity=0.142 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhccc---CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchh-HHHHHHHHH
Q 014982 28 SALLHSSSCFFFILSAYFVVLPLRDEGAISL---GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAK-ALVLIHRFF 103 (415)
Q Consensus 28 ~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~---Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~r-l~~~i~~fF 103 (415)
+++....+..++....+......-.....+. +.++..+.........++..++.+++.+ |.+|++ .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~ 252 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSD--RLGRRRLLLLIGLLLA 252 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHH
Confidence 3444444444444444444444333333331 2333444555557778888899999999 999888 554433332
Q ss_pred HHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHH
Q 014982 104 SVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNL 183 (415)
Q Consensus 104 ~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl 183 (415)
.+..+.+ .... + .| .. .+.++......-
T Consensus 253 ~i~~~~~----~~~~--------------------------~-------------~~-----~~----~~~~~~~g~~~~ 280 (352)
T cd06174 253 ALGLLLL----ALAP--------------------------S-------------LA-----LL----LVALLLLGFGLG 280 (352)
T ss_pred HHHHHHH----HHhc--------------------------c-------------HH-----HH----HHHHHHHHHHHh
Confidence 2222211 1110 0 11 00 123333344444
Q ss_pred HHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 184 ITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 184 ~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.........++|.++.++--|.+++.+...++|..+|+.+...+. ..|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~ 329 (352)
T cd06174 281 FAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG 329 (352)
T ss_pred ccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 455678889999999999999999999999999999999887776 444
No 93
>PRK15075 citrate-proton symporter; Provisional
Probab=96.39 E-value=1.4 Score=45.22 Aligned_cols=38 Identities=8% Similarity=0.120 Sum_probs=30.8
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
..++.|.++.++=.|..++.+.+.++|.++|+.+...+
T Consensus 139 ~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l 176 (434)
T PRK15075 139 SVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLL 176 (434)
T ss_pred HHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999888899999888888887777665554
No 94
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.38 E-value=1.5 Score=45.16 Aligned_cols=39 Identities=15% Similarity=0.035 Sum_probs=29.2
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 189 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 189 FWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
--..++|.++.+|-.+..++...|.+.|.++|+.+...+
T Consensus 145 ~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~ 183 (432)
T PRK10406 145 SATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVL 183 (432)
T ss_pred HHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788999888777788888888888887777654443
No 95
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.35 E-value=1 Score=48.61 Aligned_cols=169 Identities=25% Similarity=0.231 Sum_probs=97.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhh--hhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHH
Q 014982 26 ETSALLHSSSCFFFILSAYFVVLPL--RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (415)
Q Consensus 26 E~~~~l~~~l~~F~Il~~y~iLRpi--rDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF 103 (415)
+.+.++.....+++...+++.+-|+ ||.+ ..|++..-++..+....+++...+.+++.+ +.++++++......+
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l--~~~a~~yGll~a~~gvGai~Gal~~~~l~~--~~~~~~lv~~~~~~~ 294 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARDVL--GGGASGYGLLLAAFGVGAILGALLLPRLRR--RLSSRRLVLLASLLF 294 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHHhhc--ccCcchhhHHHHHHH
Confidence 4445555455555555566666664 4433 246677777766667778888888999988 999999876555444
Q ss_pred HHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHH
Q 014982 104 SVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNL 183 (415)
Q Consensus 104 ~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl 183 (415)
++.++.+++ .. + .|. ....+++....+ .
T Consensus 295 a~~~~~lal----~~--------------------------~-------------~~~--------~~~~l~l~G~~~-~ 322 (524)
T PF05977_consen 295 ALALLLLAL----SP--------------------------S-------------FWL--------ALIALFLAGAAW-I 322 (524)
T ss_pred HHHHHHHhc----ch--------------------------H-------------HHH--------HHHHHHHHHHHH-H
Confidence 333332211 10 0 231 011334433332 2
Q ss_pred HHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHH
Q 014982 184 ITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSK 250 (415)
Q Consensus 184 ~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~ 250 (415)
...+.+=..+-...+.+.=-|.+++.......|..+|+.+...++ .+|. ..++++++.+.++..+..
T Consensus 323 ~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 323 IANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 233333344556666666788888888777777777877777776 6674 344455554444554443
No 96
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.28 E-value=0.7 Score=46.89 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=43.2
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccC
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPR 258 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~ 258 (415)
.....+....+.+..++-+++.++..++|.+.++.+...+. .+|. ....+++++..++..+..+..+++.+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 395 (402)
T PRK11902 323 AFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRGTIGR 395 (402)
T ss_pred HHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 44455555555555566678877777788877666666665 6674 44444454444566666666665543
No 97
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=96.23 E-value=0.16 Score=49.41 Aligned_cols=46 Identities=22% Similarity=0.334 Sum_probs=39.2
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
+.+...++|.++.++..|.+|+.....++|..+|+.+...+. ..|.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 360 (377)
T TIGR00890 314 SLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGF 360 (377)
T ss_pred hccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 456778999999999999999999999999999998887765 5553
No 98
>TIGR00893 2A0114 d-galactonate transporter.
Probab=96.23 E-value=0.24 Score=48.23 Aligned_cols=47 Identities=21% Similarity=0.314 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.....|..++|.++.++-.+.+|+.+...++|+.+|+.+...+. ..|
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 328 AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 45588999999999999999999999999999999998887775 445
No 99
>PRK12307 putative sialic acid transporter; Provisional
Probab=96.19 E-value=0.3 Score=49.50 Aligned_cols=45 Identities=20% Similarity=0.074 Sum_probs=39.3
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.+++..+.|.++.+..-|-.|++...+.+|+++|+.++.++. ..|
T Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 340 GLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 467788899999999999999999999999999999988876 455
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.16 E-value=2 Score=44.61 Aligned_cols=63 Identities=21% Similarity=0.253 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcc-cC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCC-CchhHHHH
Q 014982 33 SSSCFFFILSAYFVVLPLRDEGAIS-LG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNL-SKAKALVL 98 (415)
Q Consensus 33 ~~l~~F~Il~~y~iLRpirDsl~vs-~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~-sr~rl~~~ 98 (415)
...++|+-.+.+-..-|.- ++.+. .| .+++..+.-...+..++..++-+.++| |. +++|+..+
T Consensus 7 Ls~~~f~~f~~~G~~~p~~-~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aD--r~~~~~~~l~~ 73 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYL-PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIAD--RFGSAKRILAL 73 (400)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--HhhhHHHHHHH
Confidence 3344444444444444543 24444 44 567777766667888888899999999 86 56666654
No 101
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.15 E-value=0.76 Score=45.23 Aligned_cols=43 Identities=9% Similarity=0.036 Sum_probs=33.1
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.....+.|.++.+. .+..++.....++|..+|+.+...+. ..|
T Consensus 308 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g 351 (375)
T TIGR00899 308 IGMLYFQDLMPGRA-GAATTLYTNTGRVGWIIAGSVGGILAERWS 351 (375)
T ss_pred HHHHHHHHhCcchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44556788886544 48899999999999999998887765 445
No 102
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.11 E-value=1.8 Score=43.56 Aligned_cols=79 Identities=13% Similarity=-0.074 Sum_probs=49.4
Q ss_pred hHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHhcHHH
Q 014982 307 GLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRLGFAM 385 (415)
Q Consensus 307 g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrlG~~~ 385 (415)
.++.++|+|.+..+.....++.......+--.....++.--++++ .|......++...+++.+..+ +.+|+|-+.
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~----ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 275 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEW----IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR 275 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 466788889887777777777665544444334445543223333 344444555556666665666 789999888
Q ss_pred HHHH
Q 014982 386 FFYL 389 (415)
Q Consensus 386 ~l~~ 389 (415)
.+.+
T Consensus 276 ~l~~ 279 (390)
T TIGR02718 276 TFIL 279 (390)
T ss_pred HHHH
Confidence 7654
No 103
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=96.10 E-value=0.65 Score=47.20 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=34.5
Q ss_pred HHHHHHhhcC-ccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 189 TWARVIDVMD-SESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 189 FWsfandif~-~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.+..+.|.++ .+++-+.+|++...+++|+.+|+.+..++. ..|.
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4444566664 567888999999999999999999988887 5553
No 104
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.01 E-value=1.5 Score=44.48 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=31.6
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
+...+|.++ ++..+..++.+.+.++|..+|+.+...+. ..|
T Consensus 327 ~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g 368 (393)
T PRK15011 327 MLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN 368 (393)
T ss_pred HHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445678886 45677899988889999999998887766 445
No 105
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.87 E-value=1.2 Score=47.50 Aligned_cols=152 Identities=14% Similarity=0.242 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-cCcC--chhhHHHHHHHHHHHHHHHHHHHhcCCCCCch--hHHHHHHHH
Q 014982 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS-LGLS--KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKA--KALVLIHRF 102 (415)
Q Consensus 28 ~~~l~~~l~~F~Il~~y~iLRpirDsl~vs-~Gae--~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~--rl~~~i~~f 102 (415)
+.+...++-.|+..-++..+-.+--..+.+ .|-+ ++-.+.+.+-+++++-..+++++.+ |+..+ |.+......
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~--r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQD--RFGPKTKRTLLISLIL 358 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCchhHHHHHHHHH
Confidence 444444444444444444444443333332 3333 3334455668888899999999999 99888 776655544
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHH
Q 014982 103 FSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLN 182 (415)
Q Consensus 103 F~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfn 182 (415)
. .++..+..+....... +..+ .| .||+..-+++
T Consensus 359 ~--~~i~~~g~~G~~~~~~-------------------------------g~~~--~~------------~f~~~a~~~G 391 (477)
T PF11700_consen 359 W--IIIPLYGLFGFWPSFF-------------------------------GLKS--PW------------EFWVLAVLIG 391 (477)
T ss_pred H--HHHHHHHHHHhhhccc-------------------------------Cccc--HH------------HHHHHHHHHH
Confidence 3 1222222221110000 0000 34 4666555554
Q ss_pred HHH---HHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 183 LIT---ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 183 l~~---~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
++. -+.=-++..++-+.++.-++||+.+.-+-..+++||.+...+.
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~ 440 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLIT 440 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 3366778999999999999999999999999999999988876
No 106
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=95.84 E-value=0.42 Score=47.97 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.....+..++|.++.++--+-.++.+...++|+++|+.+...+. ..|
T Consensus 400 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~ 447 (481)
T TIGR00879 400 WGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG 447 (481)
T ss_pred ccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33567788899999888888999999999999999998877665 444
No 107
>TIGR00895 2A0115 benzoate transport.
Probab=95.84 E-value=0.54 Score=46.19 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHH
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 226 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~ 226 (415)
-......++.++|.++.++--+.+|+..+.+.+|+.+|+.+...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 353 NGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 33455788999999999888899999999999999999987654
No 108
>PRK11010 ampG muropeptide transporter; Validated
Probab=95.81 E-value=1.3 Score=46.87 Aligned_cols=68 Identities=12% Similarity=0.082 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHH
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGI 252 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L 252 (415)
....+|..+.+..+.+...+-||+.++.+++|.++++.+...+. ..|- ...++.+++..++..+...+
T Consensus 333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 33467899999999999999999999999999998877777766 4563 23333333333455544444
No 109
>PRK03633 putative MFS family transporter protein; Provisional
Probab=95.80 E-value=1.5 Score=43.97 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=33.6
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 189 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 189 FWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.-+.++|..+.++.....+.++.+.++|..+||.+...+. ..|.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~ 350 (381)
T PRK03633 306 AMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD 350 (381)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3344667777777777888888899999999998888775 5554
No 110
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=95.77 E-value=0.12 Score=53.85 Aligned_cols=43 Identities=14% Similarity=0.200 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
....++.+.|.++.++..+.+|++....++|.++|+.+...+.
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 393 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLV 393 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeee
Confidence 3456778889999999889999999999999999998887765
No 111
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.70 E-value=1.4 Score=47.22 Aligned_cols=166 Identities=17% Similarity=0.118 Sum_probs=94.4
Q ss_pred HHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH-------HhH-HHHH-HHHHHHHHHHHHHHHHhhhccCCCCCC
Q 014982 193 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-------LGP-YLLL-FAACLMELAAQSSKGIYKEIPRRPEEL 263 (415)
Q Consensus 193 andif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~-------~g~-~Lll-vaa~ll~la~~~~~~L~~~~~~~~~~~ 263 (415)
+...|+.+|=-.-.|+..+.+++|.++||.++..+.+ .|- ++.+ -+++.+..+..+. .+......
T Consensus 159 lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f----~~lp~~P~-- 232 (495)
T KOG2533|consen 159 LGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF----FFLPDNPS-- 232 (495)
T ss_pred HHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE----EEecCChh--
Confidence 5566777776667899999999999999999887531 121 3433 3333333333332 23333211
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 264 PPLRKADSDPRSG--ADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTV 341 (415)
Q Consensus 264 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~ 341 (415)
..+... +.|+. .+..+ + .+++...++ --+.+++..+++|.+...++.-++...+.+-..+..--+
T Consensus 233 -~~~fl~-~~ek~~~~~~~~----~--~~~~~~~~~-----~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~ 299 (495)
T KOG2533|consen 233 -KAWFLT-DEEKELVVERLR----E--SPSGGIENK-----FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLY 299 (495)
T ss_pred -hccccc-hHHHHHHHHHHH----h--ccCCCcccc-----cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHH
Confidence 001111 11000 00000 0 001110111 125678889999999999999999998888665555566
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 342 IAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYA 377 (415)
Q Consensus 342 v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~i 377 (415)
+++...=.+..+..++....+.|++..++.-+++-.
T Consensus 300 l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr 335 (495)
T KOG2533|consen 300 LKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR 335 (495)
T ss_pred HHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH
Confidence 666322234666777777777777777666665554
No 112
>PRK09528 lacY galactoside permease; Reviewed
Probab=95.69 E-value=0.39 Score=49.00 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=33.6
Q ss_pred HHHHHHHhhcCccchhHHHHH-HHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 188 STWARVIDVMDSESGSRLFGF-IGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygl-i~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.....+++.++.+.....++. .+.++++|.++|+.+...+. ..|
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G 380 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG 380 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 445778888888777777766 67788899999998887776 456
No 113
>PRK03699 putative transporter; Provisional
Probab=95.63 E-value=1.1 Score=45.40 Aligned_cols=43 Identities=14% Similarity=0.238 Sum_probs=31.7
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
...+...+..+ ++..+..+.+...+.+|+.+||.+...+. ..|
T Consensus 314 ~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g 357 (394)
T PRK03699 314 TIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG 357 (394)
T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC
Confidence 34456666665 34456789999999999999999988876 455
No 114
>PRK12382 putative transporter; Provisional
Probab=95.56 E-value=1.5 Score=44.02 Aligned_cols=45 Identities=16% Similarity=0.064 Sum_probs=36.6
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.....+.|.++.++.-+.+|+.+.+.++|..+|+.+...+. ..|.
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 367 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGY 367 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 44556678888888889999999999999999998888776 5563
No 115
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=95.47 E-value=4 Score=42.84 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccc
Q 014982 69 GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAA 148 (415)
Q Consensus 69 ~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (415)
..++...+..+++|++.+ |+.|+|.+......+.+..++.++. ++.
T Consensus 65 ~~~l~~~ig~~~~G~l~D--r~Grr~~l~~~~~l~~i~~~~~a~~--~~~------------------------------ 110 (490)
T PRK10642 65 VPFLIRPLGGLFFGMLGD--KYGRQKILAITIVIMSISTFCIGLI--PSY------------------------------ 110 (490)
T ss_pred HHHHHHHHHHHHHHHHHH--hcccHHHHHHHHHHHHHHHHHHHhc--ccH------------------------------
Confidence 446677788999999999 9999999988777765444443321 110
Q ss_pred cccCCCCCCccccccccchhhhhHHHHH---HHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHH
Q 014982 149 VDQGSTANSADWGDHGWFYVSVRMGFFL---WVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAA 225 (415)
Q Consensus 149 ~~~~~~~~~~~w~~~~W~y~~~~~~FYi---w~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~ 225 (415)
..+ +-|... .+.+ ...+-.-.....--..++|.++.++-.+.-++...|+++|.++|+.+..
T Consensus 111 ----------~~~-g~~a~~----~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 111 ----------ATI-GIWAPI----LLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred ----------HHH-HHHHHH----HHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000000 0111 1111111111223356889998777667889999999999999887765
Q ss_pred HH
Q 014982 226 GM 227 (415)
Q Consensus 226 ~l 227 (415)
.+
T Consensus 176 ~~ 177 (490)
T PRK10642 176 LI 177 (490)
T ss_pred HH
Confidence 54
No 116
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=95.42 E-value=1.1 Score=43.36 Aligned_cols=45 Identities=16% Similarity=0.041 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 184 ITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 184 ~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
......++.+.|.++.++--+.+|+.....++|+.+|+.+...+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 317 PINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345578888999999999999999999999999999988876654
No 117
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=95.41 E-value=0.2 Score=48.42 Aligned_cols=119 Identities=19% Similarity=0.267 Sum_probs=76.1
Q ss_pred hhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhh
Q 014982 51 RDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSH 130 (415)
Q Consensus 51 rDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~ 130 (415)
+|....+ |.+...++.......+.+..++.+++.+ |+++++..........+..+.+...-....
T Consensus 234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 298 (352)
T PF07690_consen 234 QEVLGFS-GPSQAGLLFSIFGIVGIIGSLLAGRLSD--RFGRRRRLLIAILLLILGALGLLLLPFSSS------------ 298 (352)
T ss_dssp CHHHHCC-THHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHCCSHHHCH------------
T ss_pred hhccCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCcHHHHHHHHHHHHHHHHHHHHHHHhhh------------
Confidence 5655554 4455665566666677777899999999 998877776655444222222211111100
Q ss_pred hhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHH
Q 014982 131 LESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIG 210 (415)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~ 210 (415)
. .| .+ ...+......-.........+.|.++.++..+.+|+.+
T Consensus 299 --------------~-------------~~-----~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 341 (352)
T PF07690_consen 299 --------------P-------------VW-----LI-----IALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFN 341 (352)
T ss_dssp --------------H-------------HH-----HH-----HHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHH
T ss_pred --------------H-------------HH-----HH-----HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 0 12 11 12222333334455688899999999999999999999
Q ss_pred HHHhHHHHHhH
Q 014982 211 AGATLGQLFGS 221 (415)
Q Consensus 211 aGg~lG~I~Gg 221 (415)
...++|+++||
T Consensus 342 ~~~~~~~~igP 352 (352)
T PF07690_consen 342 SIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHCC
Confidence 99999999986
No 118
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=95.39 E-value=2 Score=42.91 Aligned_cols=45 Identities=16% Similarity=0.283 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.....+.+..+.++.-|.+++.....++|..+|+.++..+. ..|.
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~ 376 (408)
T PRK09874 331 AVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGF 376 (408)
T ss_pred HHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcch
Confidence 34445566777777788999999999999999999888776 4553
No 119
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=95.34 E-value=5.1 Score=43.20 Aligned_cols=297 Identities=13% Similarity=0.061 Sum_probs=157.5
Q ss_pred HHHHHHHHHhhhhhhhhhcc-------cC--cCc-hhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 014982 38 FFILSAYFVVLPLRDEGAIS-------LG--LSK-LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSL 107 (415)
Q Consensus 38 F~Il~~y~iLRpirDsl~vs-------~G--ae~-LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~l 107 (415)
-+++|.|-.+|.+|-++-+. .| .++ .-.+..+-+..=++..++-+++.+ |+.-++++........+.-
T Consensus 29 ~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaD--rlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 29 VLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTD--YLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHH--HhCchHHHHHHHHHHHHHH
Confidence 35566667777777666444 13 223 334433334445566677788989 9999998876555443332
Q ss_pred HHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHH
Q 014982 108 LVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITIS 187 (415)
Q Consensus 108 l~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~s 187 (415)
++..+. ... ..+ .+.+++|=+.+-. ..
T Consensus 107 ~L~~fa--~Sl----------------------------------------~~L-------~i~R~llGvaEA~---~~- 133 (511)
T TIGR00806 107 LLLLLG--TSV----------------------------------------WHM-------QLMEVFYSVTMAA---RI- 133 (511)
T ss_pred HHHHHH--HHH----------------------------------------HHH-------HHHHHHHHHHHHH---HH-
Confidence 222221 000 000 0123444444422 12
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHh-H---HHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLG-P---YLLLFAACLMELAAQSSKGIYKEIPRRPEEL 263 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g-~---~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~ 263 (415)
-.-..+...|+.+|=.|..++..+|..+|..+|+.++..+..+| . .|..++.....++..+...|=+....--.+
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~- 212 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFN- 212 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhc-
Confidence 44556888999999999999999999999999999988865555 1 254555555556666666653211000000
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCcccccCcc----cchHhhHHHHhhchHHHHHH----HHHHHHHHHHHHH
Q 014982 264 PPLRKADSD-PRSGADGQTAPAAKVPSPRSSTSIVKPHL----WAILDGLRLIFSSNYLLSVS----LFLWLSAVVSSFF 334 (415)
Q Consensus 264 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~----~~~~~g~~~I~~S~YL~~Ia----~~v~l~~v~~tlv 334 (415)
+ ..+.+ ....+.++..+.. .++++ +..|..+ .-++.-++...++|.++.-. +-.+.|.-+.|.+
T Consensus 213 ~---~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~ 285 (511)
T TIGR00806 213 R---LEDVRGALPCELDQMVPGP---GGKLE-DYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYV 285 (511)
T ss_pred c---ccccccccccccccCCCCC---ccccc-hhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHH
Confidence 0 00000 0000000100000 00010 0011111 13567778888888877664 4566777888888
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHH----H----HHHHHHHHHHHHhhhhccc
Q 014982 335 YFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMF----F----YLMFYLLVTMTFLLNTWFS 406 (415)
Q Consensus 335 ~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~----l----~~m~~~~~~~~~~~~~~~~ 406 (415)
...|+.+ .|+++. +-|..+.+...+.-+..+....+ +.+|... + .+.--+++.|.++-|.|.+
T Consensus 286 Q~LW~~v----~~~~~~---yNG~veA~~tllga~~a~~ag~~--~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~ 356 (511)
T TIGR00806 286 HTLWGTL----DESLNK---YNGAVDAASTLLGAITSFIAGFV--NIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVL 356 (511)
T ss_pred HHHHHHc----CCCccc---cCCHHHHHHHHHHHHHHHHHHhh--cCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHH
Confidence 8888766 232222 66777777766666555554433 2233321 1 2222445556666666643
No 120
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=95.21 E-value=1.8 Score=43.52 Aligned_cols=60 Identities=17% Similarity=0.166 Sum_probs=38.9
Q ss_pred HHHHHHHhhcCc-cchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHH
Q 014982 188 STWARVIDVMDS-ESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQ 247 (415)
Q Consensus 188 lFWsfandif~~-~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~ 247 (415)
.+...+.+..+. ++.-+-+++.+...++|.++|+.+...+. ..|. ....+++++..++..
T Consensus 323 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 323 AIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 334444455554 77788899999999999999998888776 5563 333333333333333
No 121
>TIGR00898 2A0119 cation transport protein.
Probab=95.20 E-value=1.5 Score=45.74 Aligned_cols=45 Identities=7% Similarity=0.072 Sum_probs=36.7
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHh
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLG 231 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g 231 (415)
....+..++|+++.+.-.+-.|+.++.+.+|+++|+.+.. +...+
T Consensus 428 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~ 472 (505)
T TIGR00898 428 FQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKW 472 (505)
T ss_pred HHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHH
Confidence 3466788999999888788899999999999999998877 44333
No 122
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=95.15 E-value=3.1 Score=42.72 Aligned_cols=46 Identities=13% Similarity=-0.041 Sum_probs=31.2
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhH-HHHHhHHHHHHHHHHh
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATL-GQLFGSLFAAGMAFLG 231 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~l-G~I~Gg~l~~~la~~g 231 (415)
....|...+|.|+.+.--+-+|+....+++ ++..++.+...+...|
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g 400 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIG 400 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 346888999999998888899998876654 2333555444443334
No 123
>PRK09952 shikimate transporter; Provisional
Probab=95.10 E-value=3.7 Score=42.45 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhcCccchhHHHHHH-HHHHhHHHHHhHHHHHHHH
Q 014982 184 ITISSTWARVIDVMDSESGSRLFGFI-GAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 184 ~~~slFWsfandif~~~eAKRlygli-~aGg~lG~I~Gg~l~~~la 228 (415)
......|..++|.++.+.--.-.|+. +.|..+|+.++|.+...+.
T Consensus 359 ~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~ 404 (438)
T PRK09952 359 MVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALV 404 (438)
T ss_pred HHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34557899999999986433355553 3445577778887777664
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=94.83 E-value=3.7 Score=42.34 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=31.8
Q ss_pred HHHHhhcCccchhHHHHHHH-HHHhHHHHHhHHHHHHHH
Q 014982 191 ARVIDVMDSESGSRLFGFIG-AGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 191 sfandif~~~eAKRlygli~-aGg~lG~I~Gg~l~~~la 228 (415)
..++|.++.++--+.+|+.+ +...+|.++|+.+...+.
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~ 369 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMV 369 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45788999888889999996 677889999998887765
No 125
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=94.80 E-value=1.5 Score=44.55 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=66.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhcccccc
Q 014982 63 LPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAK 142 (415)
Q Consensus 63 LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (415)
..++.....+.+++..++.+++.+ |+++++.........++.++.+. ....
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~--r~g~~~~~~~~~~~~~~~~~~~~---~~~~------------------------ 309 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVK--KFGRKILFAGGILLMVLGYLIFF---FAGS------------------------ 309 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHHHHHHH---Hcch------------------------
Confidence 333444446777788899999999 99999887554433322222211 1100
Q ss_pred CCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccc-------hhHHHHHHHHHHhH
Q 014982 143 EDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSES-------GSRLFGFIGAGATL 215 (415)
Q Consensus 143 ~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~e-------AKRlygli~aGg~l 215 (415)
+ .|. . .++.+......-......|+.++|+.+.+| .-+.+|+.+....+
T Consensus 310 --~-------------~~~-----~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 365 (437)
T TIGR00792 310 --N-------------LPL-----I----LVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL 365 (437)
T ss_pred --h-------------HHH-----H----HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH
Confidence 0 110 0 022222233223345678999999987544 34578888888888
Q ss_pred HHHHhHHHHHHH
Q 014982 216 GQLFGSLFAAGM 227 (415)
Q Consensus 216 G~I~Gg~l~~~l 227 (415)
|..+|+.+...+
T Consensus 366 g~~lg~~i~g~l 377 (437)
T TIGR00792 366 GQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHHHHH
Confidence 888888776654
No 126
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=94.78 E-value=5.7 Score=40.84 Aligned_cols=122 Identities=12% Similarity=0.047 Sum_probs=72.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhcccc
Q 014982 61 SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSN 140 (415)
Q Consensus 61 e~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (415)
+...++.....+..++..++.+++.| |+.|||++......+.+..++.++....... .
T Consensus 55 ~~~~~~~s~~~ig~~~~~~~~G~l~d--r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~----~---------------- 112 (479)
T PRK10077 55 SLLGFCVASALIGCIIGGALGGYCSN--RFGRRDSLKIAAVLFFISALGSAWPEFGFTS----I---------------- 112 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHhhcccccc----c----------------
Confidence 34556666668888899999999999 9999999877666654443332221000000 0
Q ss_pred ccCCCccccccCCCCCCccccccccchhhhhHHHHHHH---HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHH
Q 014982 141 AKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWV---ALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQ 217 (415)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~---~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~ 217 (415)
..+ .+ +.+. .++++- .+..-......-..++|.++.+|--+..++.+.+..+|.
T Consensus 113 --~~~-------------~~----~~~~----~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 113 --GPD-------------NT----GYVP----EFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred --ccc-------------ch----hHHH----HHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 000 00 0000 122221 221122223444558999999888888999999999999
Q ss_pred HHhHHHHHHH
Q 014982 218 LFGSLFAAGM 227 (415)
Q Consensus 218 I~Gg~l~~~l 227 (415)
++++.+...+
T Consensus 170 ~~~~~~~~~~ 179 (479)
T PRK10077 170 LVVYFVNYFI 179 (479)
T ss_pred HHHHHHHHHH
Confidence 8887665544
No 127
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=94.76 E-value=1.1 Score=44.35 Aligned_cols=46 Identities=15% Similarity=0.126 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
....+..++|.++.++.-|.+|+....+++|+.+|+.+...+. ..|
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 346 WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3467788999999999999999999999999999999988876 555
No 128
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=94.76 E-value=2.5 Score=43.72 Aligned_cols=42 Identities=19% Similarity=0.276 Sum_probs=32.9
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHH-hHHHHHHHH-HHh
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLF-GSLFAAGMA-FLG 231 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~-Gg~l~~~la-~~g 231 (415)
+..++|.++.++.-+..|+.+..+++|+.+ |+.+...+. ..|
T Consensus 369 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 369 GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred HHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 345789999999999999999888888654 677776665 555
No 129
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=94.70 E-value=3.6 Score=41.51 Aligned_cols=38 Identities=13% Similarity=-0.005 Sum_probs=28.0
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.....+..+ ++.-|.++..+....+|..+|+.+...+.
T Consensus 331 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~l~ 368 (406)
T PRK15402 331 YRLTLFSSD-VSKGTVSAAMGMLSMLIFTVGIELSKHAY 368 (406)
T ss_pred HHHHhhhcc-ccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444433 66778999999999999989988877764
No 130
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=94.37 E-value=4.6 Score=41.53 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=34.7
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
...|..+.|.++.++--+-.|+..+.+.+|+++|+.+...+
T Consensus 383 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 383 PVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred chhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999999988888899999999999999987665433
No 131
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=94.35 E-value=6.7 Score=39.79 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=32.4
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
+..+.|..+ ++.-+-+|+.+++.++|+.+||.+...+. ..|.
T Consensus 337 ~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~ 379 (402)
T TIGR00897 337 AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGA 379 (402)
T ss_pred HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 445667654 56678899999999999999998887775 4453
No 132
>PTZ00207 hypothetical protein; Provisional
Probab=94.29 E-value=5.8 Score=43.63 Aligned_cols=60 Identities=13% Similarity=0.167 Sum_probs=37.0
Q ss_pred hhhhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 014982 47 VLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFF 111 (415)
Q Consensus 47 LRpirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~ 111 (415)
..++++.+..+ .+++.++.......+ .+.++.|++.+ |+++++++.+-...+.+..++++
T Consensus 50 s~~L~~~lgls--~~~l~~i~svg~~~g-~~~lp~G~L~D--r~G~R~vllig~ll~~iG~ll~a 109 (591)
T PTZ00207 50 SGAMQARYNLT--QRDLSTITTVGIAVG-YFLLPYSFIYD--YLGPRPIFVLSMTVFCLGTLLFA 109 (591)
T ss_pred HHHHHHHhCcC--HHHHHHHHHHHHHHH-HHHHHHHHHHH--HhCcHHHHHHHHHHHHHHHHHHH
Confidence 45667666554 334555544323333 45667899999 99999998776665544444333
No 133
>PRK11663 regulatory protein UhpC; Provisional
Probab=94.27 E-value=3.7 Score=42.27 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=37.4
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
.++..+.|.++.++.-+..|+.+..+++|+.+||.+...+. ..|
T Consensus 357 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g 401 (434)
T PRK11663 357 LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH 401 (434)
T ss_pred HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc
Confidence 45556789999999999999999999999999998887776 555
No 134
>PRK09669 putative symporter YagG; Provisional
Probab=94.15 E-value=1.4 Score=45.50 Aligned_cols=44 Identities=27% Similarity=0.364 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhhcCccc---hhH----HHHHHHHHHhHHHHHhHHHHHH
Q 014982 183 LITISSTWARVIDVMDSES---GSR----LFGFIGAGATLGQLFGSLFAAG 226 (415)
Q Consensus 183 l~~~slFWsfandif~~~e---AKR----lygli~aGg~lG~I~Gg~l~~~ 226 (415)
.....+.|+.++|+.|.+| ++| .|+..+....+|..+|+.++..
T Consensus 334 ~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 334 NLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455689999999998777 444 4777777777887777766544
No 135
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=94.09 E-value=1.4 Score=46.97 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=73.5
Q ss_pred cCcCchhhHHH-HHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhh
Q 014982 58 LGLSKLPGLFV-GSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDA 136 (415)
Q Consensus 58 ~Gae~LP~l~~-~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~ 136 (415)
.+.|..++... ......++..+++.++++ |+.|++++.+.....++. .+++++...
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~--~~gkk~~~~~~~~~~~i~----~~~~~f~~~----------------- 324 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVK--KFGKKKLFLIGLLLLAVG----YLLLYFTPA----------------- 324 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHH--HhchHHHHHHHHHHHHHH----HHHHHhhcC-----------------
Confidence 47888887655 445556666999999999 999999998764433222 222222210
Q ss_pred ccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccch---hH----HHHHH
Q 014982 137 VSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESG---SR----LFGFI 209 (415)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eA---KR----lygli 209 (415)
++ .++ ..++.+...+-......+-|+.+.|+-|.+|- || .|+..
T Consensus 325 -------~~-------------~~l---------~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 325 -------GS-------------VVL---------IVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred -------cc-------------hHH---------HHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 00 221 01222222333445566999999999999995 45 57777
Q ss_pred HHHHhHHHHHhHHHHHH
Q 014982 210 GAGATLGQLFGSLFAAG 226 (415)
Q Consensus 210 ~aGg~lG~I~Gg~l~~~ 226 (415)
+...=+|.-+|+.+..+
T Consensus 376 tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 376 TFFRKLGLALAGFIPGW 392 (467)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777777777765555
No 136
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=94.06 E-value=4.5 Score=42.07 Aligned_cols=40 Identities=18% Similarity=0.082 Sum_probs=33.4
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhH-HHHHhHHHHHHHHH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATL-GQLFGSLFAAGMAF 229 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~l-G~I~Gg~l~~~la~ 229 (415)
...++|.++.++.-+-.|+++..+++ |+.+++.+...+..
T Consensus 371 ~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 371 GVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 45567999999999999999999997 76888888777754
No 137
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=93.96 E-value=3 Score=41.17 Aligned_cols=42 Identities=12% Similarity=0.044 Sum_probs=30.9
Q ss_pred HHHHHHHHhhc-CccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 187 SSTWARVIDVM-DSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 187 slFWsfandif-~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
...++.+.+.. +.+++.+.+++....+.+|+.+||.+...+.
T Consensus 304 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 304 PLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555565544 4566778899999999999999988876654
No 138
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=93.87 E-value=1.5 Score=42.55 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
....|..++|.++.++--+.+|+.+..+++|+.+|+.+...+.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 370 (379)
T TIGR00881 328 QMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370 (379)
T ss_pred hHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 3466888999999999999999999999999999998876654
No 139
>PF13347 MFS_2: MFS/sugar transport protein
Probab=93.70 E-value=0.51 Score=48.50 Aligned_cols=145 Identities=16% Similarity=0.224 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhcc--cCcC-chhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHH
Q 014982 28 SALLHSSSCFFFILSAYFVVLPLRDEGAIS--LGLS-KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (415)
Q Consensus 28 ~~~l~~~l~~F~Il~~y~iLRpirDsl~vs--~Gae-~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~ 104 (415)
|++....+..++..+++.+..+. ...+.+ .|.| ....+.....+.+++..++.+++++ |++++|.....+..++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~-~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~--r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTF-LPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSK--RFGKKKVYIIGLLLAA 301 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhH-HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH--HccceeehhhhHHHHH
Confidence 44555555555555555443332 223333 3444 3444444568888999999999999 9999998887777765
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHH
Q 014982 105 VSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLI 184 (415)
Q Consensus 105 ~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~ 184 (415)
+..+.+.+.-..+ .|. .+ +..+...+..-.
T Consensus 302 ~~~~~~~~~~~~~-----------------------------------------~~~----~~-----i~~~l~gi~~~~ 331 (428)
T PF13347_consen 302 LGFLLLFFLGPGS-----------------------------------------PWL----VL-----ILFILAGIGYGA 331 (428)
T ss_pred HHHHHHHHHHhhh-----------------------------------------HHH----HH-----HHHHHhHhhhcc
Confidence 5554433322100 121 11 233333333333
Q ss_pred HHHHHHHHHHhhcCccchh---H----HHHHHHHHHhHHHHHhHHHHH
Q 014982 185 TISSTWARVIDVMDSESGS---R----LFGFIGAGATLGQLFGSLFAA 225 (415)
Q Consensus 185 ~~slFWsfandif~~~eAK---R----lygli~aGg~lG~I~Gg~l~~ 225 (415)
.....|+..+|+.+.+|-| | .+++.+....+|.-+|+.+..
T Consensus 332 ~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 332 FFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred cccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 4468899999999988754 4 566666666666666555443
No 140
>PRK10504 putative transporter; Provisional
Probab=93.66 E-value=8.6 Score=39.65 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
........+.+..+.++--+-+++.+...++|..+|+.++..+
T Consensus 370 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 370 RFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345556677778777777889999999999988888777664
No 141
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=93.54 E-value=10 Score=39.11 Aligned_cols=225 Identities=19% Similarity=0.136 Sum_probs=130.7
Q ss_pred chhHHHHHHHH-HHHHHHHHHHhhhhhhhhhcccCc--CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 26 ETSALLHSSSC-FFFILSAYFVVLPLRDEGAISLGL--SKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 26 E~~~~l~~~l~-~F~Il~~y~iLRpirDsl~vs~Ga--e~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
+.+++-.-++. +.+.+.+=++--|--..+--+.|- +++-.++...+..+.++.++-+.+.+ |+.|||.--.....
T Consensus 31 ~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD--~~Grk~~cl~~cil 108 (354)
T PF05631_consen 31 AFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLAD--RYGRKKACLLFCIL 108 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCchHHHHHHHHH
Confidence 34444444444 566677777777877777766554 47899999999999999999999999 99999975332222
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHH
Q 014982 103 FSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLN 182 (415)
Q Consensus 103 F~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfn 182 (415)
++ +.. +..... + ++- .|+ ..+.+
T Consensus 109 y~---~sc--l~k~~~--------------------------~--------~~~--L~~----------------GRvlg 131 (354)
T PF05631_consen 109 YS---LSC--LTKHSS--------------------------N--------YPV--LLL----------------GRVLG 131 (354)
T ss_pred HH---HHH--HHHhcc--------------------------c--------cHH--HHH----------------HHHHH
Confidence 11 111 111110 0 000 121 22222
Q ss_pred HHHHH------HHHHHHHhh---cCccchhHHHHHHH-HHHhHHHHHhHHHHHHHH-HH--hH-HHHHHHHHHHHHHHHH
Q 014982 183 LITIS------STWARVIDV---MDSESGSRLFGFIG-AGATLGQLFGSLFAAGMA-FL--GP-YLLLFAACLMELAAQS 248 (415)
Q Consensus 183 l~~~s------lFWsfandi---f~~~eAKRlygli~-aGg~lG~I~Gg~l~~~la-~~--g~-~Lllvaa~ll~la~~~ 248 (415)
=+.+| .-|-+.-.- |+.|-=.+.|+... .+..+-+|.+|.++..++ .. |+ .-...++.++.++..+
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 22333 235544331 12222234566555 455556777888877776 33 33 2233334444334333
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHH
Q 014982 249 SKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSA 328 (415)
Q Consensus 249 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~ 328 (415)
+. ..|-++. . +.. ++++.+.+..++.+.|.++|=++.+.+.-.++.
T Consensus 212 I~--~~W~ENy----------------g-~~~---------------~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE 257 (354)
T PF05631_consen 212 IL--KTWPENY----------------G-DTS---------------SSSSLSGSFREAWRAILSDPRILLLGLIQSLFE 257 (354)
T ss_pred HH--hcccccC----------------C-Ccc---------------cccchHHHHHHHHHHHHcCchhHHHHHHHHHHH
Confidence 21 1222111 0 000 012334578899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 014982 329 VVSSFFYFQKVTVIA 343 (415)
Q Consensus 329 v~~tlv~f~~~~~v~ 343 (415)
.+.-+.-|.|.-.++
T Consensus 258 ~smy~FVflWtPaL~ 272 (354)
T PF05631_consen 258 GSMYLFVFLWTPALD 272 (354)
T ss_pred HHHHHheeeeeceec
Confidence 999999999988777
No 142
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=93.53 E-value=12 Score=39.96 Aligned_cols=183 Identities=15% Similarity=0.050 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC-ccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-----HHHHHHHHHHHHH
Q 014982 173 GFFLWVALLNLITISSTWARVIDVMD-SESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-----YLLLFAACLMELA 245 (415)
Q Consensus 173 ~FYiw~~vfnl~~~slFWsfandif~-~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-----~Lllvaa~ll~la 245 (415)
+-|+..++.-.++..=+|++.+++++ .+|=-|+.+.=..++++|.++-..+...+. .+|. .....+.++.+++
T Consensus 117 vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~ 196 (467)
T COG2211 117 VTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIG 196 (467)
T ss_pred HHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHH
Confidence 34443333333445568999999885 455567888888888888877666655554 3331 1222222222222
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHH
Q 014982 246 AQSSKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLW 325 (415)
Q Consensus 246 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~ 325 (415)
.......++....++ .++++ . +...|....+.+..++++|=++.++++.+
T Consensus 197 ~i~~l~~~~~v~ER~--------~~~~~--~--------------------~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l 246 (467)
T COG2211 197 VILLLFCFFNVKERV--------VETQP--T--------------------KTGVKLKLKDSFLLIFKNRPLLLLLLMNL 246 (467)
T ss_pred HHHHHHHHHHhhccc--------Ccccc--C--------------------cccccccHHHHHHHHHccchHHHHHHHHH
Confidence 222223333322111 11000 0 00122356788889999999999888766
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHhcHHHHHHH
Q 014982 326 LSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRLGFAMFFYL 389 (415)
Q Consensus 326 l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrlG~~~~l~~ 389 (415)
++....++---..--.+.-.-.++ |.. ......+...+.++...... +.+|+|=+.++.+
T Consensus 247 ~~~~~~~i~~s~~~yy~~y~lg~~-~l~---~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~ 307 (467)
T COG2211 247 LLFIAFNIRGSIMVYYVTYVLGDP-ELF---AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLI 307 (467)
T ss_pred HHHHHHHHHhhhhheeEEEEcCCh-HHH---HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHH
Confidence 666544432221110011111232 322 22333444445555445555 7899999998755
No 143
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=93.33 E-value=13 Score=39.66 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=48.1
Q ss_pred chHhhHHHHhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 014982 303 AILDGLRLIFSSNYLLSVSLFLWLSA-VVSSFFYFQKVTVIAMTVS-SSLGRRRLLAEINSFIAVFILAGQLTLTYAACR 380 (415)
Q Consensus 303 ~~~~g~~~I~~S~YL~~Ia~~v~l~~-v~~tlv~f~~~~~v~~~~~-d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirr 380 (415)
.+++.+|.+.|.|-+....+--.+|+ ...|+..+- .-..++.+. ++.| +..+...+++.++.-.+....+-+|
T Consensus 269 ~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~-~i~a~~~lg~s~~~----l~~~~l~~~i~a~~Ga~~~g~l~~r 343 (477)
T PF11700_consen 269 RLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFA-GIYATEVLGMSTTQ----LIVFGLVVQIVAIIGALLFGWLQDR 343 (477)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCcCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888887666555445554 333333332 222333332 4444 4555667777777666665557899
Q ss_pred hcHH--HHHHH
Q 014982 381 LGFA--MFFYL 389 (415)
Q Consensus 381 lG~~--~~l~~ 389 (415)
+|.+ .++.+
T Consensus 344 ~g~k~~~~l~~ 354 (477)
T PF11700_consen 344 FGPKTKRTLLI 354 (477)
T ss_pred hCCchhHHHHH
Confidence 9999 56433
No 144
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=93.05 E-value=10 Score=37.61 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=35.2
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.--.+++++.+.|++-|.-++..+.-.+|+++||.+.+.+.
T Consensus 30 ~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 30 AANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred hHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 55667899999999999999999999999999998887654
No 145
>PRK15075 citrate-proton symporter; Provisional
Probab=92.94 E-value=12 Score=38.48 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=31.8
Q ss_pred HHHHHHHHhhcCccchhHHHHHH-HHHHhHHHHHhHHHHHHHH-HHh
Q 014982 187 SSTWARVIDVMDSESGSRLFGFI-GAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli-~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
...|....|.++.++.-+-.|+. +.|..+|+.++|.+...+. ..|
T Consensus 350 ~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 350 GAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred hhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 35677889999999988888875 4444455667777766665 445
No 146
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=92.93 E-value=9.8 Score=43.98 Aligned_cols=43 Identities=9% Similarity=-0.060 Sum_probs=34.0
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
....+..+.+.++.++.-|.+++.+...++|.++|+.++..+.
T Consensus 340 ~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 340 IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788889998888889999999999998877776655554
No 147
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=92.83 E-value=11 Score=38.34 Aligned_cols=47 Identities=17% Similarity=0.007 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 182 NLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 182 nl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.......+|...+|.++++..-+-.|+.+..|++|+++|+.+...+.
T Consensus 294 ~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 294 MLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred hhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 33344579999999999999999999999999999999987765443
No 148
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=92.71 E-value=12 Score=37.62 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=29.7
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF 103 (415)
.+....++.......++...+.+|+.+ |++.++.+......+
T Consensus 239 ~~~~g~l~~~~~~~~i~~~~~~~~l~~--r~g~~~~l~~~~~~~ 280 (382)
T TIGR00902 239 ASATGLLWGIGVLAEIIIFAFSNKLFQ--NCSARDLLLISAIAC 280 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhHHHHh--hCCHHHHHHHHHHHH
Confidence 344556666666677777778889999 999999876544443
No 149
>PRK03545 putative arabinose transporter; Provisional
Probab=92.66 E-value=12 Score=37.52 Aligned_cols=41 Identities=15% Similarity=0.280 Sum_probs=28.9
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
..+.+..+ ++-.|..|+.+...++|..+|+.+...+. ..|.
T Consensus 317 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~ 358 (390)
T PRK03545 317 VKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGL 358 (390)
T ss_pred HHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 34556655 44557888888888888888888877766 5553
No 150
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=92.55 E-value=11 Score=36.93 Aligned_cols=45 Identities=18% Similarity=0.147 Sum_probs=31.4
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVS 106 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ 106 (415)
.+...++.....+.+++..++.+++.+ |+++++..........+.
T Consensus 241 ~~~~g~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 241 PSVFGLLFALNIIAMIFGGFLNGRFIK--KWGAKSLLRMGLILFAVS 285 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHH
Confidence 444555555556677888899999999 999999876654444333
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=92.40 E-value=13 Score=37.29 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=27.1
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIH 100 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~ 100 (415)
.++.-.+........+....+.+|+.+ |+++++.+....
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~g~l~~--r~~~~~~l~~~~ 277 (382)
T PRK11128 239 ASTIGYLWSLGVVAEVLIFAFSNRLFR--RWSARDLLLLSA 277 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHH
Confidence 334555555445567777788889999 999999865443
No 152
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=92.32 E-value=13 Score=37.46 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=27.4
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
.+...++.........+..+..+++.+ |.++++.+......
T Consensus 253 ~~~~g~~~~~~~i~~~~~~~~~g~l~~--r~g~~~~l~~~~~l 293 (396)
T TIGR00882 253 TRVFGYVTTMGELLNALIMFCAPLIIN--RIGAKNALLIAGTI 293 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH--HhccchhHHHHHHH
Confidence 334455544445566667788899999 99999987544433
No 153
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=92.31 E-value=7.1 Score=45.45 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 180 LLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 180 vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
+..-.......+...+.++.++--|.+|+.+...++|..+|+.+...+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 346 AAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344456788899999999999999999999999999998877765
No 154
>PRK10429 melibiose:sodium symporter; Provisional
Probab=92.25 E-value=4.9 Score=42.05 Aligned_cols=43 Identities=19% Similarity=0.179 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhcCccc---hhH----HHHHHHHHHhHHHHHhHHHHHHH
Q 014982 185 TISSTWARVIDVMDSES---GSR----LFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 185 ~~slFWsfandif~~~e---AKR----lygli~aGg~lG~I~Gg~l~~~l 227 (415)
.....|+.++|+.+.+| +|| .|+..+....+|.-+|+.+...+
T Consensus 341 ~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 341 FWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44578999999988665 333 68888888888888887776654
No 155
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=92.00 E-value=18 Score=38.04 Aligned_cols=84 Identities=12% Similarity=-0.003 Sum_probs=51.3
Q ss_pred HhhHHHHhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcH
Q 014982 305 LDGLRLIFSSNYLLSVSLFLWL-SAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGF 383 (415)
Q Consensus 305 ~~g~~~I~~S~YL~~Ia~~v~l-~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~ 383 (415)
..+++..++.|.+....+++.+ |....+..+..+.-... +-.--..+.|.+....++.+++.+......++|+|+
T Consensus 242 ~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~----~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~ 317 (468)
T TIGR00788 242 ILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQ----CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPY 317 (468)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcc----cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCH
Confidence 3456666888998887777777 55444333221100000 111123456666677778888888887777899999
Q ss_pred HHHHHHHHH
Q 014982 384 AMFFYLMFY 392 (415)
Q Consensus 384 ~~~l~~m~~ 392 (415)
+.++.+-..
T Consensus 318 r~~l~~~~~ 326 (468)
T TIGR00788 318 RLLFGVTTL 326 (468)
T ss_pred HHHHHHHHH
Confidence 998765443
No 156
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=91.88 E-value=0.58 Score=49.77 Aligned_cols=162 Identities=13% Similarity=0.085 Sum_probs=83.5
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH-HhHH--HHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF-LGPY--LLLFAACLMELAAQSSKGIYKEIPRRPEELP 264 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~-~g~~--Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~ 264 (415)
+-=++++|.|+-++=-|-++++..+.++|..+|....+..+. .+.| -..+++++.++++++.+...+.-
T Consensus 141 ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP-------- 212 (493)
T KOG1330|consen 141 IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREP-------- 212 (493)
T ss_pred cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCc--------
Confidence 556679999999999999999999999999998777666652 2222 22233333333344333332211
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhh-chHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 014982 265 PLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFS-SNYLLSVSLFLWLSAVVSSFFYFQKVTV-- 341 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~-S~YL~~Ia~~v~l~~v~~tlv~f~~~~~-- 341 (415)
.|+.. |+. + ++.+..|+ -.+.++-+|...+ .-|......++..-.++.++=+-.-+..
T Consensus 213 -~rga~-------~~~-----~-----~~~~~~~~-~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~ 273 (493)
T KOG1330|consen 213 -ERGAR-------DEV-----D-----GENKMVKP-FTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYY 273 (493)
T ss_pred -ccccc-------ccc-----c-----cCCcCCCC-ccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHH
Confidence 11110 110 0 00000122 2466666777777 4454444444444445544322111111
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 342 IAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY 376 (415)
Q Consensus 342 v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~ 376 (415)
..+......+.+..||.+....|++-.++--.++.
T Consensus 274 ~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd 308 (493)
T KOG1330|consen 274 SYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISD 308 (493)
T ss_pred HHHHhCCccccchhhhhHHHhhchhhheehHHHHH
Confidence 11111134466777777777766666554444443
No 157
>PRK09848 glucuronide transporter; Provisional
Probab=91.49 E-value=6.3 Score=40.60 Aligned_cols=43 Identities=21% Similarity=0.316 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhcCccch---hH----HHHHHHHHHhHHHHHhHHHHHH
Q 014982 184 ITISSTWARVIDVMDSESG---SR----LFGFIGAGATLGQLFGSLFAAG 226 (415)
Q Consensus 184 ~~~slFWsfandif~~~eA---KR----lygli~aGg~lG~I~Gg~l~~~ 226 (415)
......|+..+|+-+.+|. || .+++.+....+|..+|+.+...
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445789999999988774 34 4677777777777777665543
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=91.04 E-value=3.6 Score=43.20 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=29.0
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 224 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~ 224 (415)
..+|+.++++. .++.-..+|++++++++|++++|.+.
T Consensus 367 ~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~ 403 (476)
T PLN00028 367 GATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLF 403 (476)
T ss_pred hhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHH
Confidence 46777777764 45666789999999999999988764
No 159
>PRK10091 MFS transport protein AraJ; Provisional
Probab=90.98 E-value=19 Score=36.19 Aligned_cols=41 Identities=5% Similarity=-0.038 Sum_probs=30.1
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
.++..++.......+++..++.+++.+ |.++++........
T Consensus 234 ~~~~~~~~~~~~~~~~ig~~~~g~l~~--r~~~~~~~~~~~~~ 274 (382)
T PRK10091 234 ETSMTFIMMLVGLGMVLGNLLSGRLSG--RYSPLRIAAVTDFI 274 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHheecc--ccCchhHHHHHHHH
Confidence 445556555556777888899999999 99998887654433
No 160
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=90.72 E-value=24 Score=37.01 Aligned_cols=42 Identities=7% Similarity=-0.111 Sum_probs=28.6
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
...+....+.++.+.--+-.|+....+.+++.+++.+..++.
T Consensus 361 g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~ 402 (490)
T PRK10642 361 GVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLV 402 (490)
T ss_pred HHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667788898877556677655556666677777766654
No 161
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=90.46 E-value=6 Score=40.61 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=29.0
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHH
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 226 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~ 226 (415)
...+.+..+.++.-+..|+.+...++|+.+|+.+...
T Consensus 370 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 370 TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566788888889999999999999998877543
No 162
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=89.81 E-value=22 Score=37.56 Aligned_cols=127 Identities=20% Similarity=0.258 Sum_probs=81.8
Q ss_pred HHHHHhhhhhhhhhcccCcCchhhH--HHHH--HHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 014982 42 SAYFVVLPLRDEGAISLGLSKLPGL--FVGS--LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSS 117 (415)
Q Consensus 42 ~~y~iLRpirDsl~vs~Gae~LP~l--~~~t--~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~ 117 (415)
..|..+|+.-.+....-| ..++. ++++ .++=++..+.-|++++ ++.|+-++-.....-++ +..++...
T Consensus 47 ~~~~~V~~F~~a~~~~~~--~~~~yaGflGSsF~ilQ~~sS~~~G~~SD--~yGRkpvll~c~~~va~----s~ll~~~S 118 (451)
T KOG2615|consen 47 FVVFMVRDFNIAIGEPDG--ASVFYAGFLGSSFSILQFISSPLWGCLSD--RYGRKPVLLACLIGVAL----SYLLWALS 118 (451)
T ss_pred HHHHhhHHHHHhhCCccc--ccchhhhhHhhHHHHHHHHhhhhhhhhhh--hhCchHHHHHHHHHHHH----HHHHHHHH
Confidence 455666665554444423 25543 5555 4556778899999999 99999887654433322 44444433
Q ss_pred ccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHH----HHHHHHHHHHHHHHHHH
Q 014982 118 SIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFL----WVALLNLITISSTWARV 193 (415)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYi----w~~vfnl~~~slFWsfa 193 (415)
.. | .-++ ...++|= .+++-=+.+
T Consensus 119 ~~-----------------------------------------------F-----~afv~aR~l~Gi~kg-nl~v~rAii 145 (451)
T KOG2615|consen 119 RN-----------------------------------------------F-----AAFVLARFLGGIFKG-NLSVIRAII 145 (451)
T ss_pred HH-----------------------------------------------H-----HHHHHHHHhhhhccC-chHHHHHHH
Confidence 10 0 0111 1233311 345556679
Q ss_pred HhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH
Q 014982 194 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 229 (415)
Q Consensus 194 ndif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~ 229 (415)
.|+.+.|+=-+-.+.++..-.+|.|+||.+..+++.
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 999999888888999999999999999999999874
No 163
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=89.81 E-value=15 Score=39.45 Aligned_cols=174 Identities=17% Similarity=0.218 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhcccCcCch--hhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 014982 36 CFFFILSAYFVVLPLRDEGAISLGLSKL--PGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLL 113 (415)
Q Consensus 36 ~~F~Il~~y~iLRpirDsl~vs~Gae~L--P~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l 113 (415)
.+.-.+++-+...--...++.+.|.+.- +|+-.++-.+.++.+.+-..+.+ |++||.+.-.......+..+++...
T Consensus 278 ~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid--~~gRRpLll~~~~~~~~~~~~~~~~ 355 (485)
T KOG0569|consen 278 SFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLID--RLGRRPLLLISLSLMAVALLLMSIA 355 (485)
T ss_pred HHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666666777777776554 78777888889999999999999 9999999988888887777777666
Q ss_pred HHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 014982 114 WQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARV 193 (415)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfa 193 (415)
....... + .|. |++.. ...+.....|++-.-.+=|-++
T Consensus 356 ~~l~~~~-----------------------~--------------~~~---~y~~i--~~~~~~~~~f~~G~gpi~~fi~ 393 (485)
T KOG0569|consen 356 LFLSNSF-----------------------G--------------SWL---SYLCI--AAIFLFIISFAIGPGPIPWFIG 393 (485)
T ss_pred HHHHHHh-----------------------h--------------hHH---HHHHH--HHHHHHHHhhhcCCCchhHHHH
Confidence 5544210 0 132 01111 1233344455555566889999
Q ss_pred HhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhHH-HHHHHHHHHHHHHHHHHHHhhhcc
Q 014982 194 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGPY-LLLFAACLMELAAQSSKGIYKEIP 257 (415)
Q Consensus 194 ndif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~~-Lllvaa~ll~la~~~~~~L~~~~~ 257 (415)
+|.|+...--.-...-++.-.++..+-+..--.+. .+|+. .++.++ .+..+..++++..+
T Consensus 394 aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i----~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 394 AELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVI----PLAIFLIYLYRYLP 455 (485)
T ss_pred HHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHH----HHHHHHHHHHHhCc
Confidence 99998665544444444444444433332222222 45653 333323 23344556666554
No 164
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.02 E-value=14 Score=41.62 Aligned_cols=177 Identities=17% Similarity=0.212 Sum_probs=95.8
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-------------------HHhH-HH--HHHHHHHHHHHHHH
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-------------------FLGP-YL--LLFAACLMELAAQS 248 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-------------------~~g~-~L--llvaa~ll~la~~~ 248 (415)
+.+.|--+.++.-.+.|++.+.+.+|=++|=.+.+++. ++|. |+ ++.+++.+ ++..-
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~-~~a~p 338 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLL-FSAVP 338 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHH-HHHHH
Confidence 34677778888889999999888888777766666653 1454 34 44444443 45544
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHH
Q 014982 249 SKGIYKEIPRRPEELPPLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSA 328 (415)
Q Consensus 249 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~ 328 (415)
....=|..++...+ .+..+.+ ..+++.+ .+++....+|+ -..+...++.++++|-..+..+--++..
T Consensus 339 ~f~fPk~lp~~~~~---~~~~~~~--~~k~~~~-------~~~~~~~~~~~-ikdfp~s~~~ll~N~if~~~~l~~~~~~ 405 (735)
T KOG3626|consen 339 LFFFPKELPKSQKR---KRARDLH--VLKTESG-------GAKSDKTFGKK-IKDFPKSIKRLLSNPIFMLVVLASVIES 405 (735)
T ss_pred HHhCcccCcccccc---chhhhhc--ccccccc-------cccCCcchhhh-HHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 44443433322100 0000000 0001100 00010011111 1367888999999997776666655554
Q ss_pred HH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHhcHHH
Q 014982 329 VV-SSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRLGFAM 385 (415)
Q Consensus 329 v~-~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrlG~~~ 385 (415)
.. .-+.-|.- ..++++|.-++.++.++ ...+++-...+-.+++| +++|+-.+.
T Consensus 406 ~~~~G~~tFlP-KyLE~Qfg~sas~An~l---~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 406 LAITGYITFLP-KYLETQFGISASLANIL---TGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred HHHhhHHHhhH-HHHHHHcCCCHHHHHHH---hhhhhhhhhhhhhhccceeeeeecccH
Confidence 33 33444443 45677787665555432 33556667777778888 777665443
No 165
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=88.68 E-value=27 Score=37.33 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHH
Q 014982 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (415)
Q Consensus 71 ~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF 103 (415)
.++..+..|+-|+++| |..++|+..+.....
T Consensus 296 ~l~~~l~rplgG~LAD--RiG~~~vl~~~~i~~ 326 (462)
T PRK15034 296 PFIGAIARSVGGAISD--KFGGVRVTLINFIFM 326 (462)
T ss_pred HHHHHHHHHhhHHHHH--hcCchHHHHHHHHHH
Confidence 5667788899999999 999999887655443
No 166
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=88.49 E-value=32 Score=36.20 Aligned_cols=56 Identities=16% Similarity=0.192 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 173 GFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 173 ~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
+.|+...+=.++.....++++++.-+.+.--|..|+...+..+|..+|+.+....+
T Consensus 386 ~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~ 441 (475)
T TIGR00924 386 LIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGA 441 (475)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34443333335566799999999999888889999999999999999998877665
No 167
>PRK10054 putative transporter; Provisional
Probab=88.45 E-value=18 Score=36.81 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=31.4
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP 232 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~ 232 (415)
.....+.+.-+.+..-+.|+..+ .+.+|..+|+.+...+. +.|+
T Consensus 318 ~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~ 362 (395)
T PRK10054 318 GEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPP 362 (395)
T ss_pred hHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcCh
Confidence 44577878777766667888655 56678888888877765 6675
No 168
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=88.40 E-value=9.4 Score=39.08 Aligned_cols=45 Identities=11% Similarity=0.226 Sum_probs=37.9
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
...|....+.++.++.-+.+|+.++.+++|+++||.+...+. ..|
T Consensus 352 ~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 352 AIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred hHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 467777788899999999999999999999999998876665 344
No 169
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=87.54 E-value=2.3 Score=41.67 Aligned_cols=32 Identities=28% Similarity=0.383 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHhHHH
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGATLGQ 217 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg~lG~ 217 (415)
.....|...+++++ ++.-+.+|++++.+++|+
T Consensus 335 ~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 335 GNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred ccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 44578899999986 788899999999998875
No 170
>TIGR00901 2A0125 AmpG-related permease.
Probab=86.60 E-value=25 Score=34.62 Aligned_cols=33 Identities=6% Similarity=0.054 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHh
Q 014982 182 NLITISSTWARVIDVMDSESGSRLFGFIGAGAT 214 (415)
Q Consensus 182 nl~~~slFWsfandif~~~eAKRlygli~aGg~ 214 (415)
.-+.......++.+.++.++.-|.||+.....+
T Consensus 323 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 323 GGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 345566889999999999999999999877654
No 171
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=86.33 E-value=18 Score=38.33 Aligned_cols=39 Identities=13% Similarity=0.309 Sum_probs=34.9
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHH
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAF 229 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~ 229 (415)
+...+..+.+|.-|+||+.+.-|..+.++||.+.+.+..
T Consensus 364 Sy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~ 402 (438)
T COG2270 364 SYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQ 402 (438)
T ss_pred HHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHH
Confidence 346889999999999999999999999999999887763
No 172
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=85.94 E-value=42 Score=34.03 Aligned_cols=43 Identities=12% Similarity=-0.069 Sum_probs=31.2
Q ss_pred HHHHHHhhcCccc-hhHHHHHHHHHHhHHHHHhHHHHHHHHHHh
Q 014982 189 TWARVIDVMDSES-GSRLFGFIGAGATLGQLFGSLFAAGMAFLG 231 (415)
Q Consensus 189 FWsfandif~~~e-AKRlygli~aGg~lG~I~Gg~l~~~la~~g 231 (415)
.....-+..+.|+ .-|..++.+...++|..+|..+...+..+|
T Consensus 314 ~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
T PRK11195 314 MNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLG 357 (393)
T ss_pred HHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcC
Confidence 4455555544333 367999999999999999998877666666
No 173
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=85.73 E-value=16 Score=38.39 Aligned_cols=42 Identities=19% Similarity=0.211 Sum_probs=37.3
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.+.|...+|+|+.+---+-+|+....+.+|+++|+.+...+.
T Consensus 411 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 452 (502)
T TIGR00887 411 ATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLA 452 (502)
T ss_pred chhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhh
Confidence 478999999999998889999999999999999998877664
No 174
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.15 E-value=13 Score=39.27 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=33.6
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Q 014982 308 LRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSS 349 (415)
Q Consensus 308 ~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~ 349 (415)
+.-+++-||.+.++.-+...++...++|=...--..|.+.++
T Consensus 263 ~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p 304 (464)
T KOG3764|consen 263 MWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTP 304 (464)
T ss_pred HHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCC
Confidence 567899999999999999999999999886666555555433
No 175
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=84.72 E-value=63 Score=34.91 Aligned_cols=158 Identities=11% Similarity=0.066 Sum_probs=96.3
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcc----cCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHH
Q 014982 22 LHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAIS----LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALV 97 (415)
Q Consensus 22 i~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs----~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~ 97 (415)
-|.-+++......+..|+....+++.-|..+.=.-. ++++-.-++--++-+.-.+.+++||+-.+ |..+- -.+
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~--k~~~~-k~P 104 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSN--KTGSV-KKP 104 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccc--ccCCc-ccC
Confidence 344455667777777899999999998888876554 45555666655667778889999999888 65532 223
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHH
Q 014982 98 LIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLW 177 (415)
Q Consensus 98 ~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw 177 (415)
.+.++. ..+++=+++...+ |-++ +. +|. . ++=++.
T Consensus 105 li~s~i---i~~~g~llY~~l~-~~~~-------------------~~-------------~y~----m-----L~~R~l 139 (488)
T KOG2325|consen 105 LIVSFL---IAIIGNLLYLALA-YVPN-------------------GV-------------KYL----M-----LVARIL 139 (488)
T ss_pred HHHHHH---HHHHHHHHHHHHH-hccc-------------------ch-------------HHH----H-----HHHHHH
Confidence 333332 1222333332211 0000 00 221 0 122222
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 178 VALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 178 ~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
..+= .=..+.-=..++|.-..+|=.|-+..++.|-.+|.++|+.+-..+.
T Consensus 140 ~Gvg-~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 140 TGVG-VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred cCcC-cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 2111 1122344455888889999999999999999999999998877765
No 176
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=84.60 E-value=60 Score=34.64 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHH
Q 014982 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (415)
Q Consensus 71 ~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF 103 (415)
...+++.+++.|.+++ |+.|+..+-+...+.
T Consensus 72 ~~~~~i~s~~iG~lSD--~~grk~~L~~~~~~~ 102 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSD--RYGRKVVLLLPLFGT 102 (463)
T ss_pred HHHHHHHHhhhHHhhh--hhhhhhhHHHHHHHH
Confidence 5678899999999999 999999877665544
No 177
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=83.99 E-value=61 Score=34.22 Aligned_cols=214 Identities=17% Similarity=0.160 Sum_probs=112.9
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHh--H--HHHHHHHHHHHHHHHHHHHHhhhcc--CCCC
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLG--P--YLLLFAACLMELAAQSSKGIYKEIP--RRPE 261 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g--~--~Lllvaa~ll~la~~~~~~L~~~~~--~~~~ 261 (415)
.+.+..-..-+.++-+|.-+..-+.-.+|-.+|+.++..+...+ + .|..++.....++......|-+... ..+.
T Consensus 113 ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r 192 (412)
T PF01770_consen 113 AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHR 192 (412)
T ss_pred HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceec
Confidence 56666667778888999998888888888888888877776443 2 2444444444455555555533111 0000
Q ss_pred CCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHH----HHHHHHHHHHHHH
Q 014982 262 ELPPLRKADSDPRSG--ADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSL----FLWLSAVVSSFFY 335 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~----~v~l~~v~~tlv~ 335 (415)
.++......+++.+ ++..+++....+.+..+....+..-..++.-++...++|.++.-.+ -.+.|..+.|.+.
T Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ 271 (412)
T PF01770_consen 193 -KPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQ 271 (412)
T ss_pred -cCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHH
Confidence 00000000000000 0000000000000000000111111245666788889999988765 4556677777777
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHhcHHHH-H----HHHHHHHHHHHHhhhhcccc
Q 014982 336 FQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYA-ACRLGFAMF-F----YLMFYLLVTMTFLLNTWFSG 407 (415)
Q Consensus 336 f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~i-irrlG~~~~-l----~~m~~~~~~~~~~~~~~~~~ 407 (415)
.-|+++ +++++...+-|.++.+...+.-+..+....+ .++=-|+-. + .+.-.++..|.+.-+-|.+-
T Consensus 272 ~LW~~v-----~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y 344 (412)
T PF01770_consen 272 SLWDTV-----PPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCY 344 (412)
T ss_pred HHHHhc-----CCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 777666 5666777788888877777776555554443 221111111 1 22335567777777777654
No 178
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=83.83 E-value=63 Score=34.20 Aligned_cols=76 Identities=12% Similarity=0.006 Sum_probs=45.4
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcccC--cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHH
Q 014982 24 PHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLG--LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHR 101 (415)
Q Consensus 24 ~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~G--ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~ 101 (415)
+...+.+.+..++++.-.+.+++.-|+--.+--..| .+++-++-..-.++..++=.+|+-+.+ |+..|+..-....
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~d--rfGgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTD--RFGGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhc--ccCchHHHHHHHH
Confidence 333444555555555555566666665544442233 334444322225667788899999999 9999998765443
No 179
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=83.75 E-value=51 Score=34.62 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 224 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~ 224 (415)
......+.+..+.++..+-.++.+...++|+.+|..+.
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 370 LASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIF 407 (495)
T ss_pred HHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 34455566778889999999999999999998887664
No 180
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=83.44 E-value=67 Score=34.24 Aligned_cols=32 Identities=9% Similarity=0.241 Sum_probs=27.1
Q ss_pred HHhhcCccchhHHHHHHHHHHhHHHHHhHHHH
Q 014982 193 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFA 224 (415)
Q Consensus 193 andif~~~eAKRlygli~aGg~lG~I~Gg~l~ 224 (415)
+.+-|+.+|=-|..++-+.--|+|+-+-+.++
T Consensus 142 i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 142 ITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred HHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 56778888888889999999999998877776
No 181
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=83.44 E-value=63 Score=33.93 Aligned_cols=41 Identities=12% Similarity=0.047 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGM 227 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~l 227 (415)
..-..+..|.++.++--|..++...+..+|.++|+.++..+
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567899999999999999999999999999988776544
No 182
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=83.14 E-value=59 Score=33.37 Aligned_cols=42 Identities=19% Similarity=0.288 Sum_probs=32.0
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHhHHH-HHhHHHHHHHH-HHh
Q 014982 190 WARVIDVMDSESGSRLFGFIGAGATLGQ-LFGSLFAAGMA-FLG 231 (415)
Q Consensus 190 Wsfandif~~~eAKRlygli~aGg~lG~-I~Gg~l~~~la-~~g 231 (415)
+..+.|.++.++..+..|+.+..+++|+ .+|+.+...+. ..|
T Consensus 367 ~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g 410 (438)
T TIGR00712 367 GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 410 (438)
T ss_pred HHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc
Confidence 4457789988888889999988888875 56887777665 445
No 183
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=82.81 E-value=66 Score=33.75 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=41.6
Q ss_pred HHHHHhhhhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHH
Q 014982 42 SAYFVVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLV 109 (415)
Q Consensus 42 ~~y~iLRpirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~ 109 (415)
..|.-++|.=.+..= ...+.++++..+--+.+++-+.+-||+.| | +.++.+........+.++.
T Consensus 229 ~~ftYi~P~L~~v~g-~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~d--r-~~~~~l~~~~~l~a~~~l~ 292 (394)
T COG2814 229 ALYTYIRPFLESVAG-FSVSAVSLVLLAFGIAGFIGNLLGGRLAD--R-GPRRALIAALLLLALALLA 292 (394)
T ss_pred hhHHhHHHHHHHccC-CCHhHHHHHHHHHHHHHHHHHHHHhhhcc--c-cchhHHHHHHHHHHHHHHH
Confidence 345555665432211 35778999877666778889999999999 9 6666666555554444443
No 184
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=82.78 E-value=42 Score=35.36 Aligned_cols=129 Identities=12% Similarity=0.047 Sum_probs=75.2
Q ss_pred cCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHH-Hhhccccccchhhhhhhhhhhh
Q 014982 58 LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLW-QSSSIGYLSKLESVSHLESLDA 136 (415)
Q Consensus 58 ~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~-~~~~~~~~~~~~~~~~~~~~~~ 136 (415)
.+.+.+-.+.....+..++...+++++.+ |++.++++.......++..+....+. ..+..
T Consensus 285 ~s~~~~G~~~~~~~v~~i~g~~~~~~~~~--~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~----------------- 345 (468)
T TIGR00788 285 GGPSFSGMSKVVGNLGSLCGVGGYDRFLK--TFPYRLLFGVTTLLYTLSSLFDLILVKRWNLA----------------- 345 (468)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHh--hCCHHHHHHHHHHHHHHHHhCceeeeeccccc-----------------
Confidence 35666666655556888899999999988 99988887655544322221111000 00000
Q ss_pred ccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHH
Q 014982 137 VSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLG 216 (415)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG 216 (415)
. +.+. .|. .. ..-+..++-.-+...-.-.++.+..+.++.-..|++.+.-.++|
T Consensus 346 ------~---------gi~~--~~~-----~~----~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg 399 (468)
T TIGR00788 346 ------F---------GISD--EVF-----VL----GDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLG 399 (468)
T ss_pred ------c---------CCCC--eee-----ee----ehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHH
Confidence 0 0000 110 00 01111111111222233566899999999999999999999999
Q ss_pred HHHhHHHHHHHH-HHh
Q 014982 217 QLFGSLFAAGMA-FLG 231 (415)
Q Consensus 217 ~I~Gg~l~~~la-~~g 231 (415)
.++|+.++..+. .+|
T Consensus 400 ~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 400 SSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 999998888776 444
No 185
>PRK11462 putative transporter; Provisional
Probab=81.91 E-value=21 Score=37.48 Aligned_cols=66 Identities=6% Similarity=-0.013 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc
Q 014982 317 LLSVSLFLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLG 382 (415)
Q Consensus 317 L~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG 382 (415)
+.+..+..+++.+..|+++..+.+...+.-+|++||++..+......++-.++.+++...++..+|
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344555666778899999999999999999999999999997776666656666666555555544
No 186
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=80.63 E-value=51 Score=34.46 Aligned_cols=88 Identities=11% Similarity=0.085 Sum_probs=48.9
Q ss_pred hHhhHHHHhhchHHHHHHH-HHHHHHHHHHHHHH----HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 304 ILDGLRLIFSSNYLLSVSL-FLWLSAVVSSFFYF----QKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAA 378 (415)
Q Consensus 304 ~~~g~~~I~~S~YL~~Ia~-~v~l~~v~~tlv~f----~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~ii 378 (415)
....+...++.|-+....+ +..++......-+- .+.+... .|+=-..|+|..+...++.+++--..-....
T Consensus 204 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~----gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~ 279 (433)
T PF03092_consen 204 QLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALG----GPHFSPSFYGTLSIVGSIASLLGILLYRKYF 279 (433)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccc----ccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555677778888877777 55555544433222 0001111 1222456888888555555544444433378
Q ss_pred hHhcHHHHHHHHHHHHH
Q 014982 379 CRLGFAMFFYLMFYLLV 395 (415)
Q Consensus 379 rrlG~~~~l~~m~~~~~ 395 (415)
++..||.++....++.+
T Consensus 280 ~~~~~R~~~~~t~~~~~ 296 (433)
T PF03092_consen 280 SNWSWRRIFVVTTLVSV 296 (433)
T ss_pred hCCCHHHHHHHHHHHHH
Confidence 88899998866554443
No 187
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=79.41 E-value=80 Score=32.50 Aligned_cols=41 Identities=17% Similarity=0.226 Sum_probs=26.9
Q ss_pred HHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 187 SSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 187 slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
...|....|..+ +.+-...|+.+.++++|++++|.++..+.
T Consensus 380 ~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 380 AGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred hhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 345555555553 35666677778888888888877766654
No 188
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=78.87 E-value=74 Score=31.78 Aligned_cols=42 Identities=10% Similarity=0.139 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 186 ISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 186 ~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.....+.+.|.++.++ -+-.++.+.+.++|+.+|+.++..+.
T Consensus 317 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 317 FPLATSGAMEPFPYLA-GTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3455556667776444 45588999899999999988776554
No 189
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=78.27 E-value=1e+02 Score=32.97 Aligned_cols=152 Identities=13% Similarity=0.102 Sum_probs=82.9
Q ss_pred HHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-H-Hh-HH-HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 014982 192 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-F-LG-PY-LLLFAACLMELAAQSSKGIYKEIPRRPEELPPLR 267 (415)
Q Consensus 192 fandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~-~g-~~-Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~ 267 (415)
+...-.+..|--|+.++..+|.++|.+++-.++.++. . +| +. -++.+++.+ +-..+..++++....++ |.
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~-i~~~~w~~~~~d~P~~h----~~- 225 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGL-IWFILWFLFYSDSPSKH----PN- 225 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHH-HHHHHHHHHhcCCcccC----CC-
Confidence 3456678999999999999999999999888877775 4 67 44 455544433 22333334433222111 00
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 014982 268 KADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAMTVS 347 (415)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~~~~ 347 (415)
-++.|.+ .-+ ++| ++.+.+++ ..--.+.|++||=++.+.+-..+......++--..-...++-..
T Consensus 226 --is~~El~--~I~--~~k-----~~~~~~~~----~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~ 290 (466)
T KOG2532|consen 226 --ISEKELK--YIE--KGK-----SEAHVKKK----PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLG 290 (466)
T ss_pred --CCHHHHH--HHH--hcc-----cccccCCC----CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC
Confidence 0011100 000 001 11011110 12226789999999988887777766555544444455555554
Q ss_pred CHHHHHHHHHHHHHHHH
Q 014982 348 SSLGRRRLLAEINSFIA 364 (415)
Q Consensus 348 d~~~~t~f~g~~~~~~~ 364 (415)
=..+-+.|++.+=....
T Consensus 291 f~v~~~G~~salP~l~~ 307 (466)
T KOG2532|consen 291 FDVRETGFLSALPFLAM 307 (466)
T ss_pred CChhhhhHHHHHHHHHH
Confidence 44455666665533333
No 190
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=75.95 E-value=89 Score=31.17 Aligned_cols=39 Identities=0% Similarity=-0.000 Sum_probs=27.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 62 ~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
....+.......+++..++.+++.+ |++|+|........
T Consensus 240 ~~~~~~~~~~~~~i~~~~~~~~l~~--r~g~~~~~~~~~~~ 278 (392)
T PRK10473 240 EYAIIMALTAGVSMTVSFSTPFALG--IFKPRTLMLTSQVL 278 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHH
Confidence 3444444556667777888999999 99999876554443
No 191
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=74.66 E-value=90 Score=30.66 Aligned_cols=41 Identities=5% Similarity=0.083 Sum_probs=30.6
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 60 LSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 60 ae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
.++..++.....+.+++..++.+++.+ |++++|........
T Consensus 229 ~~~~g~~~~~~~~~~~~~~~~~g~l~~--r~g~~~~~~~~~~~ 269 (377)
T PRK11102 229 PQNFGYYFALNIVFLFVMTIINSRFVR--RVGALNMLRFGLWI 269 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCHHHHHHHHHHH
Confidence 445556666667778888899999999 99999887654443
No 192
>PRK11043 putative transporter; Provisional
Probab=73.41 E-value=1e+02 Score=30.78 Aligned_cols=39 Identities=8% Similarity=0.056 Sum_probs=28.4
Q ss_pred HHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 189 TWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 189 FWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
..+.+.|.. .++..|-.|+++..+..++..|+.++..+.
T Consensus 317 ~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 317 VVAQALRPF-PQATGKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred HHHHHhhhC-cccChHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 333444555 467889999999988888888888777664
No 193
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=72.80 E-value=75 Score=34.28 Aligned_cols=38 Identities=21% Similarity=0.280 Sum_probs=34.7
Q ss_pred HHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 191 ARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 191 sfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
..+.|+...|+-.+-||+......++.++||.++..+.
T Consensus 411 ~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~ 448 (509)
T KOG2504|consen 411 VILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLY 448 (509)
T ss_pred HHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeee
Confidence 47889999999999999999999999999999988664
No 194
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=71.49 E-value=1.2e+02 Score=30.76 Aligned_cols=41 Identities=17% Similarity=0.227 Sum_probs=35.4
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 188 STWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 188 lFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
..-..++|..+.++.-|.+|+.+...++|..+|+.+...+.
T Consensus 317 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 317 ARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred cHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHH
Confidence 33467888999999999999999999999999998888876
No 195
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=70.94 E-value=53 Score=26.40 Aligned_cols=68 Identities=21% Similarity=0.114 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHHHH
Q 014982 323 FLWLSAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYLMF 391 (415)
Q Consensus 323 ~v~l~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~m~ 391 (415)
..++.+......+-.....+.|.+ +++++...+|..+...++...+.....+.+.+..||+..+.++.
T Consensus 57 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (141)
T TIGR00880 57 ARFLQGFGAAFALVAGAALIADIY-PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLA 124 (141)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHC-ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHH
Confidence 344455555555555555666665 45678888888888777777666655444778889988876654
No 196
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=69.38 E-value=1.6e+02 Score=31.36 Aligned_cols=113 Identities=11% Similarity=0.018 Sum_probs=66.0
Q ss_pred HHHHhhhhhhhhhcc-cCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014982 43 AYFVVLPLRDEGAIS-LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGY 121 (415)
Q Consensus 43 ~y~iLRpirDsl~vs-~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~ 121 (415)
.-|.-+-..|+.+.. -+....-+......++..+++|+-|..++ ...+||-+ .++|.+.=.++.+.+.+..++
T Consensus 39 ply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD--~~g~Rk~~---~~~f~~i~i~~~~~L~~i~~~- 112 (438)
T COG2270 39 PLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIAD--YPGPRKKF---FGFFTAIGIISTFLLWFIPPG- 112 (438)
T ss_pred HHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhc--cCCCcchH---HHHHHHHHHHHHHHHHHhCCC-
Confidence 334455555544433 23334444444456667788899999998 66555554 233333333444444433210
Q ss_pred ccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 014982 122 LSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSES 201 (415)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~e 201 (415)
+ .| .. ..+||+..++=..+.....=++.-|+++.++
T Consensus 113 -----------------------s-------------~~-----~~---~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 113 -----------------------S-------------YL-----LL---LLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred -----------------------c-------------hH-----HH---HHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 0 12 22 2489988777655556667778899999999
Q ss_pred hhHH
Q 014982 202 GSRL 205 (415)
Q Consensus 202 AKRl 205 (415)
.+|.
T Consensus 149 ~~ri 152 (438)
T COG2270 149 MGRI 152 (438)
T ss_pred cCcc
Confidence 9997
No 197
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=68.76 E-value=1.4e+02 Score=30.29 Aligned_cols=32 Identities=19% Similarity=0.326 Sum_probs=21.3
Q ss_pred CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 014982 59 GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSK 92 (415)
Q Consensus 59 Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr 92 (415)
+.+....+.......+++...+.+++.+ |..+
T Consensus 250 s~~~~g~~~~~~~~~~iig~~~~~~l~~--r~~~ 281 (394)
T PRK10213 250 GVDGLTLVLLSFGIASFVGTSLSSFILK--RSVK 281 (394)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHh--ccch
Confidence 4555666555555566777788889988 8543
No 198
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=67.84 E-value=94 Score=33.68 Aligned_cols=63 Identities=16% Similarity=0.110 Sum_probs=44.0
Q ss_pred HHHhhcCccchhH--HHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhh
Q 014982 192 RVIDVMDSESGSR--LFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKE 255 (415)
Q Consensus 192 fandif~~~eAKR--lygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~ 255 (415)
+..|.++.+|.+| -|++.-+|.|+|+++++.++.+++ ..|- .-.-.+++-+.++. ...++.|.
T Consensus 141 llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl-~~f~~~~r 207 (498)
T COG3104 141 LLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGL-VIFLLGRR 207 (498)
T ss_pred HHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-HHHHHccc
Confidence 3789999999887 499999999999999999999987 5552 23334444443333 34444443
No 199
>PRK10263 DNA translocase FtsK; Provisional
Probab=64.94 E-value=1.3e+02 Score=36.39 Aligned_cols=14 Identities=29% Similarity=0.579 Sum_probs=8.1
Q ss_pred HHHHHhHHHHHHHH
Q 014982 215 LGQLFGSLFAAGMA 228 (415)
Q Consensus 215 lG~I~Gg~l~~~la 228 (415)
.||++|..+...+.
T Consensus 142 gGGIIG~lLs~lL~ 155 (1355)
T PRK10263 142 SGGVIGSLLSTTLQ 155 (1355)
T ss_pred ccchHHHHHHHHHH
Confidence 36666666655554
No 200
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=63.43 E-value=2.4e+02 Score=31.26 Aligned_cols=89 Identities=10% Similarity=0.066 Sum_probs=54.4
Q ss_pred chhhHHHHhhcccCcCchh-------HHHHHHH-HHHHHHHHHHHhhhhhhhh--hcc--cCcCchhhHHHHHHHHHHHH
Q 014982 10 SRLDAFASVFVTLHPHETS-------ALLHSSS-CFFFILSAYFVVLPLRDEG--AIS--LGLSKLPGLFVGSLILTLIA 77 (415)
Q Consensus 10 ~~~~~~~~~~~~i~~~E~~-------~~l~~~l-~~F~Il~~y~iLRpirDsl--~vs--~Gae~LP~l~~~t~~~~ll~ 77 (415)
.+.++..++-+.=+.+|.+ +++-.+. +.+.....|..+-.....+ ..+ .|.|+..|+-++-.+...+.
T Consensus 15 ~~~~~~~~~a~~~~~~~~p~g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~ 94 (599)
T PF06609_consen 15 QPDDRIRAEALGTEADELPDGYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVS 94 (599)
T ss_pred CcchhHHHHHhcCchhhCCCCceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHH
Confidence 3555666666544444332 3333332 3334444555554322222 112 58899999877777788888
Q ss_pred HHHHHHHhcCCCCCchhHHHHHH
Q 014982 78 APVSTLIFSLPNLSKAKALVLIH 100 (415)
Q Consensus 78 ~~lys~L~~~~r~sr~rl~~~i~ 100 (415)
.+++|+|+| .+.||.++-...
T Consensus 95 ~~~~G~LSD--lfGRr~~~i~g~ 115 (599)
T PF06609_consen 95 FPFVGRLSD--LFGRRYFFIIGS 115 (599)
T ss_pred HHhhHHHHH--HhcchHHHHHHH
Confidence 999999999 999998876543
No 201
>PF12832 MFS_1_like: MFS_1 like family
Probab=58.98 E-value=43 Score=26.57 Aligned_cols=71 Identities=20% Similarity=0.262 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcc--cCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHH
Q 014982 31 LHSSSCFFFILSAYFVVLPLRDEGAIS--LGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFF 103 (415)
Q Consensus 31 l~~~l~~F~Il~~y~iLRpirDsl~vs--~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF 103 (415)
+++-+.+|+..++...+-|-----.-+ .+++++-.+......+.++..|+.+++.+ |..++|.+.....++
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laD--k~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLAD--KFGKRKVILLGSLFM 75 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCccHHHHHHHHHH
Confidence 455566677777777766654333333 34555666665667888899999999999 999999987665543
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=57.20 E-value=2.6e+02 Score=29.54 Aligned_cols=145 Identities=16% Similarity=0.200 Sum_probs=92.0
Q ss_pred HHHHHHHhhcC-ccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHhH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 014982 188 STWARVIDVMD-SESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLGP-YLLLFAACLMELAAQSSKGIYKEIPRRPEELP 264 (415)
Q Consensus 188 lFWsfandif~-~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g~-~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~ 264 (415)
+|=.+-.+.|+ .+|+-+.||.....+.+.=+..=.++..+. .+|+ ++++++++++ +.|.+.--..
T Consensus 242 qf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~-----~iRi~~~~~~------- 309 (412)
T PF01306_consen 242 QFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIM-----AIRIIGSGFA------- 309 (412)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-----HHHHHHHHT--------
T ss_pred HHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHH-----HHHHHHHhhh-------
Confidence 45555666775 457889999998888877666555544443 7886 6776665443 2222211000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcccchHhhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014982 265 PLRKADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLWAILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFYFQKVTVIAM 344 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~f~~~~~v~~ 344 (415)
+ + ...+...=.+.+++-.+.-.--...+++
T Consensus 310 ----~---------------------------------~-------------~~~i~~~klLH~~e~~l~lva~fkYI~~ 339 (412)
T PF01306_consen 310 ----T---------------------------------N-------------PWVISLIKLLHALEFPLLLVAAFKYITA 339 (412)
T ss_dssp --------------------------------------S-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----c---------------------------------c-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 1123333444555555555545566788
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHHHHHHH
Q 014982 345 TVSSSLGRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYLMFYLL 394 (415)
Q Consensus 345 ~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~m~~~~ 394 (415)
.++++-.-|.++=.+....++.+.++......+.+++|-+.++.+|-.+.
T Consensus 340 ~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv 389 (412)
T PF01306_consen 340 HFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIV 389 (412)
T ss_dssp HS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHH
Confidence 88888777888777888888888888888666899999999988877543
No 203
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=56.32 E-value=2.5e+02 Score=29.94 Aligned_cols=48 Identities=25% Similarity=0.329 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 014982 66 LFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSS 117 (415)
Q Consensus 66 l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~ 117 (415)
.|.|.+.+++-++.+| ++. ..++.|+=++=|..=.+.+.+|++++-..
T Consensus 298 ~KYgiLFI~LTF~~ff--lfE--~~~~~~iHpiQY~LVGlAl~lFYlLLLSl 345 (430)
T PF06123_consen 298 VKYGILFIGLTFLAFF--LFE--LLSKLRIHPIQYLLVGLALVLFYLLLLSL 345 (430)
T ss_pred HHHHHHHHHHHHHHHH--HHH--HHhcCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 3556655555554444 455 66667775555655566778888766544
No 204
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=53.02 E-value=3e+02 Score=28.93 Aligned_cols=103 Identities=13% Similarity=0.212 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccc
Q 014982 71 LILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVD 150 (415)
Q Consensus 71 ~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (415)
++..++-..++|.+.+ |+.|++++...+..+ .++.....+.. +
T Consensus 128 ~~G~~vG~~i~g~lsD--~~GRk~~~~~~~~~~----~i~~~~~a~a~--------------------------~----- 170 (521)
T KOG0255|consen 128 FLGVLVGSLIFGPLSD--RFGRKPVLLVSLLLF----IIFGILTAFAP--------------------------N----- 170 (521)
T ss_pred HHHHHHHHhhheehHh--hcccHHHHHHHHHHH----HHHHHHHHHhC--------------------------c-----
Confidence 5556666777889999 999999988777665 44443333331 0
Q ss_pred cCCCCCCccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 151 QGSTANSADWGDHGWFYVSVRMGFFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 151 ~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
.| .|. ++=....++..-..+.-+..+.|+++.++=-+.=.+ ....-.|+.+++....++.
T Consensus 171 --------~~-----~~~----~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~ 230 (521)
T KOG0255|consen 171 --------YW-----MFL----IFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT 230 (521)
T ss_pred --------HH-----HHH----HHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 11 111 122234444455556777888999988876555555 5555566666665555554
No 205
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=49.31 E-value=54 Score=34.86 Aligned_cols=54 Identities=9% Similarity=0.012 Sum_probs=40.9
Q ss_pred HHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcHHHHHHHHHH
Q 014982 339 VTVIAMTVSSSL-GRRRLLAEINSFIAVFILAGQLTLTYAACRLGFAMFFYLMFY 392 (415)
Q Consensus 339 ~~~v~~~~~d~~-~~t~f~g~~~~~~~i~tl~~qlf~t~iirrlG~~~~l~~m~~ 392 (415)
...+.+.||+++ +|..-++.+....|+-+.+-.....-+.+.+||+..+.+.+.
T Consensus 127 ~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 127 ASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 367888897655 556788889999998887666654447889999999988543
No 206
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=45.66 E-value=4.2e+02 Score=28.62 Aligned_cols=41 Identities=17% Similarity=0.034 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HH-hHhcHHHHHH
Q 014982 348 SSLGRRRLLAEINS-FIAVFILAGQLTLTY-AA-CRLGFAMFFY 388 (415)
Q Consensus 348 d~~~~t~f~g~~~~-~~~i~tl~~qlf~t~-ii-rrlG~~~~l~ 388 (415)
.|++....+|.+.. .+++-+++.|.++.. ++ .--.|...+.
T Consensus 145 sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~ 188 (485)
T KOG0569|consen 145 SPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLA 188 (485)
T ss_pred ChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHH
Confidence 56677777777644 455556666677776 66 5556766543
No 207
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=43.80 E-value=7.7 Score=42.09 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=0.0
Q ss_pred cchHhhHHHHhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh
Q 014982 302 WAILDGLRLIFSSNYLLSVSLFLWL-SAVVSSFFYFQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AAC 379 (415)
Q Consensus 302 ~~~~~g~~~I~~S~YL~~Ia~~v~l-~~v~~tlv~f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iir 379 (415)
.++...++.++++|-.+++.+-.+. ..+.+.+.-|.- ..++.+|.-++..+++.. ..+.+...++-.++.| ++|
T Consensus 292 ~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~p-KylE~QF~~sas~A~~l~---G~v~ip~~~~G~llGG~ivk 367 (539)
T PF03137_consen 292 KDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLP-KYLESQFGLSASQASLLT---GIVSIPGAALGILLGGYIVK 367 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHH---hhhhcchhheehheEEEEEE
Confidence 3677778888888866665554444 345556665643 335556654444444442 3444444555556667 789
Q ss_pred HhcHHHH
Q 014982 380 RLGFAMF 386 (415)
Q Consensus 380 rlG~~~~ 386 (415)
|+.++.-
T Consensus 368 k~kl~~~ 374 (539)
T PF03137_consen 368 KFKLSAR 374 (539)
T ss_dssp -------
T ss_pred EecCcHH
Confidence 9887643
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=43.34 E-value=4e+02 Score=27.63 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 014982 66 LFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFF 111 (415)
Q Consensus 66 l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~ 111 (415)
++..+...=+.+....+|+.+ |++-++++.+....+++-+.+++
T Consensus 248 ~~~l~~~aEi~~f~~~~~~~~--r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 248 LWALGVVAEIPFFFFSGRFLK--RFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHH
Confidence 333334455566667789988 99999988777666655555444
No 209
>PRK11383 hypothetical protein; Provisional
Probab=42.26 E-value=2.6e+02 Score=25.34 Aligned_cols=77 Identities=10% Similarity=0.042 Sum_probs=51.8
Q ss_pred hhcccCcCchhHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCcCchh--hHHHH-H-HHHHHHHHHHHHHHhcCCCCCch
Q 014982 18 VFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRDEGAISLGLSKLP--GLFVG-S-LILTLIAAPVSTLIFSLPNLSKA 93 (415)
Q Consensus 18 ~~~~i~~~E~~~~l~~~l~~F~Il~~y~iLRpirDsl~vs~Gae~LP--~l~~~-t-~~~~ll~~~lys~L~~~~r~sr~ 93 (415)
-+|+-.+.=..|=.-...+++.+..++.+-|.+|| ..|.+| -.+.+ + +.+.+.+..+.--+.|++--.-|
T Consensus 30 GLwnA~~~LsEKGyY~~vl~lglF~avs~QK~vRD------~~egi~vt~~f~~~cw~a~l~~i~LL~iGLwNA~l~lsE 103 (145)
T PRK11383 30 GLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRD------KYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSE 103 (145)
T ss_pred HHhhcccccCcccHHHHHHHHHHHHHHHHHHHHhh------cccCCChhHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Confidence 45776666666766777888899999999999999 567777 34442 2 22222233333446677778889
Q ss_pred hHHHHHH
Q 014982 94 KALVLIH 100 (415)
Q Consensus 94 rl~~~i~ 100 (415)
|-+|.+.
T Consensus 104 KGfY~~a 110 (145)
T PRK11383 104 KGFYGLA 110 (145)
T ss_pred hhHHHHH
Confidence 9888754
No 210
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=41.25 E-value=3.6e+02 Score=26.53 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH-HHh
Q 014982 183 LITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA-FLG 231 (415)
Q Consensus 183 l~~~slFWsfandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la-~~g 231 (415)
..+.....+.+.+.++ +++++--++. ..+.+|+.++|.+...++ ..|
T Consensus 245 s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 245 SIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred HHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc
Confidence 3344444556666664 3455555665 567799999998888776 455
No 211
>PRK03612 spermidine synthase; Provisional
Probab=39.88 E-value=5.2e+02 Score=27.97 Aligned_cols=32 Identities=25% Similarity=0.147 Sum_probs=24.1
Q ss_pred chhHHHHHHHHHHhHHHHHhHHHHHHHH--HHhH
Q 014982 201 SGSRLFGFIGAGATLGQLFGSLFAAGMA--FLGP 232 (415)
Q Consensus 201 eAKRlygli~aGg~lG~I~Gg~l~~~la--~~g~ 232 (415)
+.+|-.|-+-+..++|+++|+.++.++- .+|.
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLLLPRLGL 175 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence 4677788888888888888888877653 4663
No 212
>PF13150 DUF3989: Protein of unknown function (DUF3989)
Probab=39.76 E-value=48 Score=27.25 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=33.6
Q ss_pred hhhHHHHhhcc-cCcCchhHHHHHHHHHHHHHHHHHHhhhhhh
Q 014982 11 RLDAFASVFVT-LHPHETSALLHSSSCFFFILSAYFVVLPLRD 52 (415)
Q Consensus 11 ~~~~~~~~~~~-i~~~E~~~~l~~~l~~F~Il~~y~iLRpirD 52 (415)
+.+..++..|. +.|++-..+...++..|..++.|.+++++-|
T Consensus 10 ~~~~~Lr~~c~~Lsp~~R~~vvl~ml~~fa~l~ly~~~~ai~~ 52 (85)
T PF13150_consen 10 RADDRLRRYCGRLSPKQRLRVVLVMLVLFAALCLYMTVSAIYD 52 (85)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555554 7777888899999999999999999999876
No 213
>PF05360 YiaAB: yiaA/B two helix domain; InterPro: IPR008024 This domain consists of two transmembrane helices and a conserved linking section.
Probab=36.78 E-value=48 Score=24.68 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=31.6
Q ss_pred hhcccCcCchhHHHHHHHHHHHHHHHHHHhhhhhh
Q 014982 18 VFVTLHPHETSALLHSSSCFFFILSAYFVVLPLRD 52 (415)
Q Consensus 18 ~~~~i~~~E~~~~l~~~l~~F~Il~~y~iLRpirD 52 (415)
-+|+...+-..|-.....++|++.....+-|.+||
T Consensus 19 Gl~~~~~~l~~KGy~~~~~l~~l~s~~tl~K~vRD 53 (53)
T PF05360_consen 19 GLWNAPLDLSEKGYYAMGLLFLLFSAFTLQKTVRD 53 (53)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHhhhhhcCC
Confidence 36788888888999999999999999999999998
No 214
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=35.85 E-value=5.3e+02 Score=26.89 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=32.3
Q ss_pred HHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHH
Q 014982 193 VIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMA 228 (415)
Q Consensus 193 andif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la 228 (415)
+.++.+...---.|+++..-.|+|..+++.++..+.
T Consensus 343 ~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~ 378 (433)
T PF03092_consen 343 AARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLM 378 (433)
T ss_pred HHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888777777999999999999999999998875
No 215
>PRK10983 putative inner membrane protein; Provisional
Probab=35.26 E-value=1.8e+02 Score=29.95 Aligned_cols=57 Identities=14% Similarity=0.097 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcccCcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 31 LHSSSCFFFILSAYFVVLPLRDEGAISLGLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 31 l~~~l~~F~Il~~y~iLRpirDsl~vs~Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
....+....+...+++++|.--++ . +....+.+..|+|.|+.+ |...+|-...+...
T Consensus 15 ~~~~l~~~l~~~~~~il~pFl~~l------------l-~A~iLa~a~~Pl~~~L~~--~~~~rr~lAA~l~~ 71 (368)
T PRK10983 15 LSVLFIAIMIVACFWVVQPFILGF------------A-WAGMVVIATWPLLLKLQK--ILWGRRSLAVLVMT 71 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------H-HHHHHHHHHHHHHHHHHH--HhCCCCcHHHHHHH
Confidence 333334445566788888843222 2 337788899999999999 88644444443333
No 216
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=29.68 E-value=6.9e+02 Score=26.35 Aligned_cols=146 Identities=14% Similarity=0.108 Sum_probs=87.8
Q ss_pred hhHHH-HHHHHHHHHHHHHHHhhhhhhhhhcccCcCchhhHH-HHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHH
Q 014982 27 TSALL-HSSSCFFFILSAYFVVLPLRDEGAISLGLSKLPGLF-VGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFS 104 (415)
Q Consensus 27 ~~~~l-~~~l~~F~Il~~y~iLRpirDsl~vs~Gae~LP~l~-~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~ 104 (415)
.+++. -..+..|--++++...-.---+++-+.|.+.-+..- .....+.++.+.+...+++ |..||+++..-...+.
T Consensus 293 ~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd--~~gRr~lll~s~~~m~ 370 (513)
T KOG0254|consen 293 RKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVD--RFGRRKLLLFGAAGMS 370 (513)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHhHHHHH
Confidence 33344 445556777788777777777777777777543221 1223344444555578889 9999999998888888
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhhhhhhhccccccCCCccccccCCCCCCccccccccchhhhhHHHHHHHHHHHHH
Q 014982 105 VSLLVFFLLWQSSSIGYLSKLESVSHLESLDAVSSNAKEDPKAAVDQGSTANSADWGDHGWFYVSVRMGFFLWVALLNLI 184 (415)
Q Consensus 105 ~~ll~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~W~y~~~~~~FYiw~~vfnl~ 184 (415)
++.++++........ +.. . .....|. -. ....+.+..|+.-
T Consensus 371 ~~~~~~~~~~~~~~~--~~~--------------------~---------~~~~~~~-----~~---~~~~~~v~~f~~g 411 (513)
T KOG0254|consen 371 ICLVILAVVGVFALY--YPN--------------------S---------SKGAGWL-----AI---VFLCLFIFSFAIG 411 (513)
T ss_pred HHHHHHHHHHHHhcc--CCC--------------------c---------ccchhHH-----HH---HHHHHHHHHHhcc
Confidence 888888877765421 000 0 0000221 11 1233345555666
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 014982 185 TISSTWARVIDVMDSESGSRLFGFIGAGA 213 (415)
Q Consensus 185 ~~slFWsfandif~~~eAKRlygli~aGg 213 (415)
...+-|..++++|+.+=-.+..++..+..
T Consensus 412 ~g~v~w~~~sEifp~~~r~~~~s~~~~~n 440 (513)
T KOG0254|consen 412 WGPVPWVIVSEIFPLRLRSKGASLAVAVN 440 (513)
T ss_pred cccchhhhhhccCcHhHHhhhHHHHHHHH
Confidence 67799999999998765555544444333
No 217
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=28.33 E-value=5.8e+02 Score=27.03 Aligned_cols=170 Identities=13% Similarity=0.049 Sum_probs=92.2
Q ss_pred HHHhhcCccchhHHHHHHHHHHhHHHHHhHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 014982 192 RVIDVMDSESGSRLFGFIGAGATLGQLFGSLFAAGMAFLGP----YLLLFAACLMELAAQSSKGIYKEIPRRPEELPPLR 267 (415)
Q Consensus 192 fandif~~~eAKRlygli~aGg~lG~I~Gg~l~~~la~~g~----~Lllvaa~ll~la~~~~~~L~~~~~~~~~~~~~~~ 267 (415)
-.=..-|.++-||.-|...+..-.|-..|+.++..+...+. .|-.++.....++......+-+.. +.. -
T Consensus 118 YIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~--rSl-----~ 190 (433)
T KOG3810|consen 118 YIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK--RSL-----Y 190 (433)
T ss_pred eeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc--hhh-----h
Confidence 34456789999999999999999999999999888863321 132222222233444433332211 100 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccccCccc--------chHhhHHHHhhchHHHHH----HHHHHHHHHHHHHHH
Q 014982 268 KADSDPRSGADGQTAPAAKVPSPRSSTSIVKPHLW--------AILDGLRLIFSSNYLLSV----SLFLWLSAVVSSFFY 335 (415)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--------~~~~g~~~I~~S~YL~~I----a~~v~l~~v~~tlv~ 335 (415)
... ++ ++.. ...+++. +.|...+ .+++-++...+||-++.= |+-.+.|.-+.|-+.
T Consensus 191 f~~-~~----~~~~--v~~~e~~-----~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q 258 (433)
T KOG3810|consen 191 FHR-LE----DKIS--VGDLEEM-----NPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQ 258 (433)
T ss_pred hhc-cc----ccce--eccchhc-----CccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHH
Confidence 000 00 0000 0000000 0111112 245566778889888764 444556667778888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HhHhcHHHHH
Q 014982 336 FQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-A-ACRLGFAMFF 387 (415)
Q Consensus 336 f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-i-irrlG~~~~l 387 (415)
..|+... ++.-..+-|-.+.....+..+..+. +| + ++|--|+-.+
T Consensus 259 ~LW~~~~------~~~~~vyNG~veAv~tlLGa~~~~~-~g~l~i~w~r~g~~l 305 (433)
T KOG3810|consen 259 ILWKEVA------PNPANVYNGAVEAVSTLLGAIAALA-AGYLNINWNRWGDLL 305 (433)
T ss_pred HHHHhhC------CCchhhhcCHHHHHHHHHHHHHHHH-HHheeeccchhhHHH
Confidence 8887664 3344556677776666666544444 45 4 6666665544
No 218
>PF02313 Fumarate_red_D: Fumarate reductase subunit D; InterPro: IPR003418 Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 13kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.; GO: 0006106 fumarate metabolic process, 0016020 membrane; PDB: 3P4R_P 1KF6_P 3P4Q_P 3P4S_D 3CIR_P 2B76_D 1L0V_P 3P4P_D 1KFY_P.
Probab=28.14 E-value=73 Score=27.91 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=22.1
Q ss_pred HhhcCccchhHHHHHHHHHHhHHHHHhHHHHHH
Q 014982 194 IDVMDSESGSRLFGFIGAGATLGQLFGSLFAAG 226 (415)
Q Consensus 194 ndif~~~eAKRlygli~aGg~lG~I~Gg~l~~~ 226 (415)
|+.-+-....=+.+++|+||+..++++|.+.-.
T Consensus 2 ~~~~kRS~EPi~W~LFgAGGm~~Al~~PvlILi 34 (118)
T PF02313_consen 2 NQNPKRSDEPIFWGLFGAGGMWSALFGPVLILI 34 (118)
T ss_dssp -SS--B-SHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred CCCCcccCCCceeeeecchHHHHHHHHHHHHHH
Confidence 333333344447899999999999999977543
No 219
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=28.01 E-value=6.5e+02 Score=25.56 Aligned_cols=38 Identities=8% Similarity=0.038 Sum_probs=22.3
Q ss_pred CcCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHH
Q 014982 59 GLSKLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVL 98 (415)
Q Consensus 59 Gae~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~ 98 (415)
+.++..+........+++...+.+++.+ +..++|....
T Consensus 252 s~~~~gl~~~~~~~~~~i~~~l~~~~~~--~~~~~~~~~~ 289 (413)
T PRK15403 252 TTSQFAWTQVPVFGAVIVANAIVARFVK--DPTEPRFIWR 289 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchhHHHH
Confidence 3444555444444555566777788776 6666666443
No 220
>TIGR02871 spore_ylbJ sporulation integral membrane protein YlbJ. Members of this protein family are found exclusively in Firmicutes (low-GC Gram-positive bacterial) and are known from studies in Bacillus subtilis to be part of the sigma-E regulon. Mutation leads to a sporulation defect, confirming that members of this protein family, YlbJ, are sporulation proteins. This protein appears to be universal among endospore-forming bacteria, but is encoded by a pair ORFs distant from eash other in Symbiobacterium thermophilum IAM14863.
Probab=26.79 E-value=3.8e+02 Score=27.87 Aligned_cols=21 Identities=33% Similarity=0.279 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014982 316 YLLSVSLFLWLSAVVSSFFYF 336 (415)
Q Consensus 316 YL~~Ia~~v~l~~v~~tlv~f 336 (415)
=+..|+.+++++++.+.+++.
T Consensus 202 til~IGGfIilFSVl~~il~~ 222 (362)
T TIGR02871 202 TILLVGGFVILFSVVISLLKN 222 (362)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356799999999999988753
No 221
>PHA01159 hypothetical protein
Probab=24.61 E-value=4e+02 Score=23.24 Aligned_cols=81 Identities=7% Similarity=-0.015 Sum_probs=58.9
Q ss_pred chHhhHHHHhhchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhH
Q 014982 303 AILDGLRLIFSSNYLLSVSLFLWLSAVVSSFFY-FQKVTVIAMTVSSSLGRRRLLAEINSFIAVFILAGQLTLTY-AACR 380 (415)
Q Consensus 303 ~~~~g~~~I~~S~YL~~Ia~~v~l~~v~~tlv~-f~~~~~v~~~~~d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirr 380 (415)
+..=+-+-..+.+....|..+=+.|.+.-++++ .-..+.++..|+.-.+-.++........+.+++.+..+.|+ ++|-
T Consensus 32 ~fv~~~~~~i~~~l~~~I~~i~~sY~~A~~Ll~~iG~~s~i~s~fnaLPseiR~~l~~fgvp~al~ii~~a~~T~fvMr~ 111 (114)
T PHA01159 32 AFVYGAMWLISVWLDILIASIQIAYKIAQLLLEEYGVYTMVESRFNALPSDIRYILTEFGVPQALRIIFDAFATALVMRF 111 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhCCHHHHHHHHHHCcchHHHHHHHHHHHHHHHHH
Confidence 334445677888899999999999988877765 44667788777543344455555556777888999999999 6887
Q ss_pred hcH
Q 014982 381 LGF 383 (415)
Q Consensus 381 lG~ 383 (415)
.||
T Consensus 112 ~~w 114 (114)
T PHA01159 112 FNW 114 (114)
T ss_pred hcC
Confidence 776
No 222
>KOG1134 consensus Uncharacterized conserved protein [General function prediction only]
Probab=24.01 E-value=2.3e+02 Score=32.25 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHh
Q 014982 315 NYLLSVSLFLWLSAVVSSF-----------FYFQKVTVIAMTVS-SSLGRRRLLAEINSFIAVFILAGQLTLTY-AACRL 381 (415)
Q Consensus 315 ~YL~~Ia~~v~l~~v~~tl-----------v~f~~~~~v~~~~~-d~~~~t~f~g~~~~~~~i~tl~~qlf~t~-iirrl 381 (415)
|-..+++++.++|+++..+ -|+.++.+.-..|. .-|..-+|...+..-+=....+.|+...| +--+-
T Consensus 556 P~~~~~f~i~i~YsviaPlILpF~lvyF~l~y~vyr~ql~yvy~~~yes~g~~wp~ih~~ii~~l~l~ql~l~gl~~~k~ 635 (728)
T KOG1134|consen 556 PRILLIFTIGICYSVIAPLILPFGLVYFCLAYLVYRYQLIYVYNQKYESGGRFWPDIHRRIIFGLILFQLILFGLFSLKK 635 (728)
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhhhheeecccccccccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5677888888888876643 35555555544443 33455566666666665666788999999 45667
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 014982 382 GFAMFFYLMFYLLVTMTF 399 (415)
Q Consensus 382 G~~~~l~~m~~~~~~~~~ 399 (415)
++..+..+.|.+++|+.|
T Consensus 636 ~~~~s~~~~~l~~lTi~~ 653 (728)
T KOG1134|consen 636 GAVASVLLFPLIVLTILF 653 (728)
T ss_pred ccccchHHHHHHHHHHHH
Confidence 888888899999998874
No 223
>PRK11715 inner membrane protein; Provisional
Probab=23.35 E-value=9.3e+02 Score=25.73 Aligned_cols=47 Identities=23% Similarity=0.296 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 014982 67 FVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRFFSVSLLVFFLLWQSS 117 (415)
Q Consensus 67 ~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~fF~~~ll~F~~l~~~~ 117 (415)
|.|.+.+++-+..+| ++. ..++.|+=++=|..=.+.+.+|++++-..
T Consensus 305 KYgiLFI~LTF~~fF--lfE--~~~~~~iHpiQYlLVGlAl~lFYLLLLSl 351 (436)
T PRK11715 305 KYAILFIALTFAAFF--LFE--LLKKLRIHPVQYLLVGLALVLFYLLLLSL 351 (436)
T ss_pred hHHHHHHHHHHHHHH--HHH--HhcCceecHHHHHHHHHHHHHHHHHHHHH
Confidence 556666555555554 556 77777776666666666778888776644
No 224
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=22.65 E-value=9.9e+02 Score=25.78 Aligned_cols=39 Identities=21% Similarity=0.205 Sum_probs=29.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHH
Q 014982 62 KLPGLFVGSLILTLIAAPVSTLIFSLPNLSKAKALVLIHRF 102 (415)
Q Consensus 62 ~LP~l~~~t~~~~ll~~~lys~L~~~~r~sr~rl~~~i~~f 102 (415)
+.|.+....+.-+++-....+.+++ +..||+-+..+..+
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d--~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSAD--TIGRRKGFNLTFLV 152 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehh--hhhcchhhhhhHHH
Confidence 4666666667777788888888989 99999988766544
No 225
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=22.48 E-value=3.8e+02 Score=21.92 Aligned_cols=62 Identities=8% Similarity=0.048 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh-hhhhcccCcCchhhHH--H-HHHHHHHHHHHHHHHHhcCCC-CCc
Q 014982 29 ALLHSSSCFFFILSAYFVVLPLR-DEGAISLGLSKLPGLF--V-GSLILTLIAAPVSTLIFSLPN-LSK 92 (415)
Q Consensus 29 ~~l~~~l~~F~Il~~y~iLRpir-Dsl~vs~Gae~LP~l~--~-~t~~~~ll~~~lys~L~~~~r-~sr 92 (415)
-.+++.+.++...++|-++-... |.+........+++-. - +.++++.+++.+|.+..| | +++
T Consensus 17 ~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~~~~~l~~~Yv~~An--~~~D~ 83 (91)
T PF04341_consen 17 LAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIVFAWVLTWLYVRRAN--REFDP 83 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHc--cccCH
Confidence 34555566666666676766666 4444443212566532 2 558999999999999988 6 544
No 226
>PF04995 CcmD: Heme exporter protein D (CcmD); InterPro: IPR007078 The CcmD protein is part of a C-type cytochrome biogenesis operon []. The exact function of this protein is uncertain. It has been proposed that CcmC, CcmD and CcmE interact directly with each other, establishing a cytoplasm to periplasm haem delivery pathway for cytochrome c maturation []. This protein is found fused to CcmE in P52224 from SWISSPROT. These proteins contain a predicted transmembrane helix.; GO: 0006810 transport, 0016021 integral to membrane
Probab=21.61 E-value=1.2e+02 Score=21.71 Aligned_cols=27 Identities=15% Similarity=0.394 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 014982 173 GFFLWVALLNLITISSTWARVIDVMDSE 200 (415)
Q Consensus 173 ~FYiw~~vfnl~~~slFWsfandif~~~ 200 (415)
.+|||.+ |.+..+.+.|-++....+.+
T Consensus 4 ~~yVW~s-Yg~t~~~l~~l~~~~~~~~r 30 (46)
T PF04995_consen 4 GFYVWSS-YGVTALVLAGLIVWSLRRRR 30 (46)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 5899987 34444444444444444333
Done!