BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014983
(415 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P47816|PDCD2_RAT Programmed cell death protein 2 OS=Rattus norvegicus GN=Pdcd2 PE=2
SV=2
Length = 343
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 176/362 (48%), Gaps = 39/362 (10%)
Query: 53 VTLGFLEKPKNRWSLLRHLFPSKAGGPPAWLDPINLPTGRSCLCDMCGEPLQFVLQVYAP 112
V LGF+E+ W L FPSK GG PAWL LP + C CG PL F+LQVYAP
Sbjct: 9 VELGFVEEAPA-WRLRSEQFPSKVGGRPAWLALAELPGPGALACARCGRPLAFLLQVYAP 67
Query: 113 IIEKESTFHRTLFLFMCPSMACLRRDQHEQWKRPPEKASRSVKVFRCQLPRSNPYYSSEP 172
+ ++ FHR+LFLF C C ++VFR QLPR N +YS EP
Sbjct: 68 LPGRDEAFHRSLFLFCCREPLC----------------CAGLRVFRNQLPRKNAFYSYEP 111
Query: 173 PKCNGTDKPS------GPGVSLCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVE 226
P G G LC CG CS C++AHYC ++HQ W+ GHK
Sbjct: 112 PSETGASDTECVCLQLKSGAHLCRVCGCL-APMTCSRCKQAHYCSKEHQTLDWQLGHKQA 170
Query: 227 CQQLNLSSPSSDSNLADAGTTSVASNSLWPEYEMINEDESEYDTEMSEVNGQTNALVSKT 286
C Q S D + D N L+PE+E++ E E E E+ E+ + + S
Sbjct: 171 CTQ----SDHLDHMVPD-------HNFLFPEFEIVTETEDEIGPEVVEMEDYSEVIGSME 219
Query: 287 GVDDTMKSLLDSFEGDSDRRSWATFQEHLAKAPEQVLRYCRSAGAKALWPTSSGQLSKAD 346
GV + + E D + F+ +A PEQ+LRY R G K +W + + D
Sbjct: 220 GVPEEELDSMAKHESKED-HIFQKFKSKIALEPEQILRYGR--GIKPIWISGENIPQEKD 276
Query: 347 IPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEANVSYKEEFVW 406
IP CS CG R FEFQ++PQLL + S+DW + V+TC SC + Y EEFVW
Sbjct: 277 IPDCS-CGAKRIFEFQVMPQLLNHLKADRLGTSVDWGILAVFTCAESCSLGIGYTEEFVW 335
Query: 407 VQ 408
Q
Sbjct: 336 KQ 337
>sp|Q2YDC9|PDCD2_BOVIN Programmed cell death protein 2 OS=Bos taurus GN=PDCD2 PE=2 SV=1
Length = 344
Score = 221 bits (563), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 179/372 (48%), Gaps = 48/372 (12%)
Query: 48 EEQKPVTLGFLEKPKNRWSLLRHLFPSKAGGPPAWLDPINLPTGRSCLCDMCGEPLQFVL 107
E P LGF+E + W L FPSK GG PAWL LP C +CG P+ F+L
Sbjct: 4 ESAGPAELGFVEAAPS-WRLRSEQFPSKVGGRPAWLSAAGLPGPPELACPLCGRPMAFLL 62
Query: 108 QVYAPIIEKESTFHRTLFLFMCPSMACLRRDQHEQWKRPPEKASRSVKVFRCQLPRSNPY 167
QVYAP+ + FHR LFLF C + C ++VFR QLPR N +
Sbjct: 63 QVYAPLPGRADAFHRCLFLFCCRTPPC----------------CCGLRVFRNQLPRQNDF 106
Query: 168 YSSEPPKCNGTDKPSGPGVS----------LCNWCGTWKGDKVCSSCRRAHYCQQKHQVT 217
YS EPP D PS G S LC CG G K CS C +AHYC ++HQ
Sbjct: 107 YSYEPPS---EDPPSETGESVYLHLKSGAHLCRVCGC-SGPKRCSRCHKAHYCSKEHQSL 162
Query: 218 HWRSGHKVECQQL-NLSSPSSDSNLADAGTTSVASNSLWPEYEMINEDESEYDTEMSEVN 276
WR GHK C Q NL + D N L+PE+E++ E E E E+ E +
Sbjct: 163 DWRLGHKQACAQTDNLDNIVPDHNF------------LFPEFEIVIETEDEIMPEVVERD 210
Query: 277 GQTNALVSKTGVDDTMKSLLDSFEGDSDRRSWATFQEHLAKAPEQVLRYCRSAGAKALWP 336
++ + + + + E D R + F+ ++ PEQ+LRY R G LW
Sbjct: 211 DESEIIGTMGEAHEEELESMAKHESKED-RIFRKFKTKISLEPEQILRYGR--GIAPLWI 267
Query: 337 TSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEA 396
+ + DIP C CG R FEFQ++PQLL Y S+DW + ++TC SC+
Sbjct: 268 SGENTPKEKDIPDCP-CGAKRLFEFQVMPQLLNYLKADRLGRSVDWGVLAIFTCAESCKL 326
Query: 397 NVSYKEEFVWVQ 408
+ Y EEFVW Q
Sbjct: 327 GIGYTEEFVWKQ 338
>sp|P46718|PDCD2_MOUSE Programmed cell death protein 2 OS=Mus musculus GN=Pdcd2 PE=2 SV=2
Length = 343
Score = 219 bits (557), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 177/363 (48%), Gaps = 39/363 (10%)
Query: 52 PVTLGFLEKPKNRWSLLRHLFPSKAGGPPAWLDPINLPTGRSCLCDMCGEPLQFVLQVYA 111
PV LGF E+ W L FPSK GG PAWL LP + C CG PL F+LQVYA
Sbjct: 8 PVELGFAEEAPA-WRLRSEQFPSKVGGRPAWLGLAELPGPGALACARCGRPLAFLLQVYA 66
Query: 112 PIIEKESTFHRTLFLFMCPSMACLRRDQHEQWKRPPEKASRSVKVFRCQLPRSNPYYSSE 171
P+ ++ FHR+LFLF C C ++VFR QLPR+N +YS E
Sbjct: 67 PLPGRDDAFHRSLFLFCCREPLC----------------CAGLRVFRNQLPRNNAFYSYE 110
Query: 172 PP---KCNGTD---KPSGPGVSLCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKV 225
PP + GT+ G LC CG CS C++AHYC ++HQ WR GHK
Sbjct: 111 PPSETEALGTECVCLQLKSGAHLCRVCGCL-APMTCSRCKQAHYCSKEHQTLDWRLGHKQ 169
Query: 226 ECQQLNLSSPSSDSNLADAGTTSVASNSLWPEYEMINEDESEYDTEMSEVNGQTNALVSK 285
C Q S D + D N L+PE+E++ E E E E+ E+ + S
Sbjct: 170 ACTQ----SDKIDHMVPD-------HNFLFPEFEIVTETEDEILPEVVEMEDYSEVTGSM 218
Query: 286 TGVDDTMKSLLDSFEGDSDRRSWATFQEHLAKAPEQVLRYCRSAGAKALWPTSSGQLSKA 345
G+ + + E D + F+ +A PEQ+LRY R G K +W + +
Sbjct: 219 GGIPEEELDSMAKHESKED-HIFQKFKSKIALEPEQILRYGR--GIKPIWISGENIPQEK 275
Query: 346 DIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEANVSYKEEFV 405
DIP C CG R FEFQ++PQLL + S+DW + V+TC SC Y EEFV
Sbjct: 276 DIPDCP-CGAKRIFEFQVMPQLLNHLKADRLGRSIDWGVLAVFTCAESCSLGSGYTEEFV 334
Query: 406 WVQ 408
W Q
Sbjct: 335 WKQ 337
>sp|Q16342|PDCD2_HUMAN Programmed cell death protein 2 OS=Homo sapiens GN=PDCD2 PE=1 SV=2
Length = 344
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 177/367 (48%), Gaps = 44/367 (11%)
Query: 51 KPVTLGFLEKPKNRWSLLRHLFPSKAGGPPAWLDPINLPTGRSCLCDMCGEPLQFVLQVY 110
+PV LGF E W L FPSK GG PAWL LP ++ C++CG PL F+LQVY
Sbjct: 7 RPVELGFAESAPA-WRLRSEQFPSKVGGRPAWLGAAGLPGPQALACELCGRPLSFLLQVY 65
Query: 111 APIIEKESTFHRTLFLFMCPSMACLRRDQHEQWKRPPEKASRSVKVFRCQLPRSNPYYSS 170
AP+ + FHR +FLF C C ++VFR QLPR N +YS
Sbjct: 66 APLPGRPDAFHRCIFLFCCREQPC----------------CAGLRVFRNQLPRKNDFYSY 109
Query: 171 EPPKCNGTDKPS-------GPGVSLCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGH 223
EPP N + G LC CG G K CS C +A+YC ++HQ WR GH
Sbjct: 110 EPPSENPPPETGESVCLQLKSGAHLCRVCGCL-GPKTCSRCHKAYYCSKEHQTLDWRLGH 168
Query: 224 KVECQQLNLSSPSSDSNLADAGTTSVASNSLWPEYEMINEDESEYDTEMSEVNGQTNALV 283
K C Q + D + D N L+PE+E++ E E E E+ E + +
Sbjct: 169 KQACAQPD----HLDHIIPD-------HNFLFPEFEIVIETEDEIMPEVVEKEDYSEIIG 217
Query: 284 SKTGVDDTMKSLLDSFEGDSDR--RSWATFQEHLAKAPEQVLRYCRSAGAKALWPTSSGQ 341
S + + ++ LDS R + + F+ +A PEQ+LRY R G +W +
Sbjct: 218 S---MGEALEEELDSMAKHESREDKIFQKFKTQIALEPEQILRYGR--GIAPIWISGENI 272
Query: 342 LSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEANVSYK 401
+ DIP C CG R EFQ++PQLL Y S+DW + V+TC SC Y
Sbjct: 273 PQEKDIPDCP-CGAKRILEFQVMPQLLNYLKADRLGKSIDWGILAVFTCAESCSLGTGYT 331
Query: 402 EEFVWVQ 408
EEFVW Q
Sbjct: 332 EEFVWKQ 338
>sp|Q5ZID2|PDD2L_CHICK Programmed cell death protein 2-like OS=Gallus gallus GN=PDCD2L
PE=2 SV=1
Length = 379
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 152/375 (40%), Gaps = 63/375 (16%)
Query: 73 PSKAGG-PPAWLD------PINLPTGR-SC-LCDMCGEPLQFVLQVYAPIIEKESTFHRT 123
P + GG PP W LP+ R C C CG L ++QVY P+ S FHR
Sbjct: 20 PCRGGGEPPGWATNKLGGRADALPSVRPGCPRCGACGAALAHLVQVYCPL--GASPFHRL 77
Query: 124 LFLFMCPSMACLRRDQHEQWKRPPEKASRSVKVFRCQLPRSNPYYSSEPPKCNGTDKPSG 183
+F C AC R Q + R +R C S + +CN + K
Sbjct: 78 ANVFACAESACWGRPQSWKVLRSQSLEARGQDALGCG--------SKQKEECNFSAK--- 126
Query: 184 PGVSLCNWCGT---WKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVEC----QQLNLSSPS 236
+WC W G S A + + + +C Q+L+LS +
Sbjct: 127 ------DWCAEADDWGGCDGTESSTCALQMLGLNAGMSSSASEEAQCVSQLQELHLSEAA 180
Query: 237 SDSN------LADAGTTSVASNSLWPEYEMINEDESEYD--TEMSEVNGQTNALVSKTGV 288
S L S ++ Y + DE++Y + N + GV
Sbjct: 181 DVSGSLNTDLLLREEMVMATSAPVFHSYYISVVDEADYAGFLDTDHANKLLKEYQQREGV 240
Query: 289 DDTMKSLL-DSFEGD------------SDRRSWATFQEHLAKAPEQVLRYCRSAGAKALW 335
D ++ L+ +SF G+ S ++ F + ++ PEQ+LRY S G + L+
Sbjct: 241 D--LEHLMSESFAGEDSNEKYEKTKVRSGDHTFHKFMKRISVCPEQILRY--SWGGQPLF 296
Query: 336 PTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSC- 394
T IP CS CG R FEFQ++P L+ D+ S+++ T++VYTCE SC
Sbjct: 297 ITCPPANFDNSIPACSNCGSNRVFEFQLMPALVSMLWGDADL-SVEFGTVIVYTCERSCW 355
Query: 395 -EANVSYKEEFVWVQ 408
+ EEF++VQ
Sbjct: 356 PTNQQTPLEEFIFVQ 370
>sp|Q8C5N5|PDD2L_MOUSE Programmed cell death protein 2-like OS=Mus musculus GN=Pdcd2l PE=2
SV=1
Length = 364
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 151/372 (40%), Gaps = 64/372 (17%)
Query: 50 QKPVTLGFLE-------KPKNRWSLLRHLFPSKAGGPPAWLDPINLPTGRSCLCDMCGEP 102
+KPV LG + K + W+ SK GG P L + P + C C +P
Sbjct: 5 RKPVLLGLRDTAVKGCPKGPSAWT------SSKLGGVPDALPAVTTPGPQ---CGRCAQP 55
Query: 103 LQFVLQVYAPIIEKESTFHRTLFLFMCPSMACLRRDQHEQWK-------RPPEKASRSVK 155
L V+QVY P+ S FHR L++F C C Q WK + PEK + + +
Sbjct: 56 LTLVVQVYCPL--DGSPFHRLLYVFACARPGC-GNSQTRSWKVFRSQCLQVPEKETWNAQ 112
Query: 156 VFRCQLPRSNPYYSSEPPKCNGTDKPSGPGVSLCNWCGTWKGDKVCSSCRRAHYCQQKHQ 215
L N S+ + + P P L G+ D R + ++
Sbjct: 113 NQSDSLAAENWCEGSQDWGSDTEETPPPPASDL----GSDSND-----VRALDWTEKLQA 163
Query: 216 VTHWRSGHKVECQQLNLSSPSSDSNLADAGTTSVASNSLWPEYEMINEDESEYDT--EMS 273
+ + V C SPS + T A P Y + E+E +Y + ++
Sbjct: 164 LRLQDTALAVTC-----PSPS-----GEGLTVPTAVPQFQPYYICVAEEE-DYGSVVDLD 212
Query: 274 EVNGQTNALVSKTGVDDTMKSLLDSFEGDSDRR-----------SWATFQEHLAKAPEQV 322
+ + GVD M+ LL D D + ++ F + +A EQ+
Sbjct: 213 HAHSLLQEYQRREGVD--MEQLLSLGSSDGDEKYEKTTVSSGDPTFYRFMKRIAACQEQI 270
Query: 323 LRYCRSAGAKALWPTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLDW 382
LRY S L S +++P CS CGG R FEFQ++P L+ +N ++++
Sbjct: 271 LRYSWSGEPLFL---SCPTFEVSEVPACSGCGGQRTFEFQLMPALVSMLSSANLGLAVEF 327
Query: 383 ATMVVYTCESSC 394
T++VYTC+ SC
Sbjct: 328 GTILVYTCKQSC 339
>sp|Q9BRP1|PDD2L_HUMAN Programmed cell death protein 2-like OS=Homo sapiens GN=PDCD2L PE=1
SV=1
Length = 358
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 152/389 (39%), Gaps = 76/389 (19%)
Query: 51 KPVTLGFLEKPKN-------RWSLLRHLFPSKAGGPPAWLDPINLPTGRSCLCDMCGEPL 103
KPV LG + P + W+ SK GG P L + P +C CG+PL
Sbjct: 6 KPVLLGLRDAPVHGSPTGPGAWTA------SKLGGIPDALPTVAAPRP---VCQRCGQPL 56
Query: 104 QFVLQVYAPIIEKESTFHRTLFLFMCPSMACLRRDQHEQWKRPPEKASRSVKVFRCQLPR 163
V+QVY P+ + S FHR L +F C C +RS KVFR Q +
Sbjct: 57 ALVVQVYCPL--EGSPFHRLLHVFACACPGC------------STGGARSWKVFRSQCLQ 102
Query: 164 SNPYYSSEPPKCNGTDKPSGPGVSLCNWC---GTWKGDKVCSSCRRAHYCQQKHQVTHWR 220
P + + G ++ +WC W D Q T
Sbjct: 103 V-------PEREAQDAQKQGNSLAAEDWCEGADDWGSDTEEGP---------SPQFTLDF 146
Query: 221 SGHKVECQQLNLSSPSSDSNLADAGTTSV----ASNSLWPEYEMINEDESEYD--TEMSE 274
+ ++ ++ D L DA + L+ Y + DE +Y +
Sbjct: 147 GNDASSAKDVDWTARLQDLRLQDAVLGAAHPVPPGLPLFLPYYICVADEDDYRDFVNLDH 206
Query: 275 VNGQTNALVSKTGVDDTMKSLL-DSFEGDSDRR-----------SWATFQEHLAKAPEQV 322
+ + G+ M LL S D D + ++ F + +A EQ+
Sbjct: 207 AHSLLRDYQQREGI--AMDQLLSQSLPNDGDEKYEKTIIKSGDQTFYKFMKRIAACQEQI 264
Query: 323 LRYCRSAGAKALW-PTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSNDVDSLD 381
LRY S L PTS ++P CS CGG R FEFQ++P L+ +N S++
Sbjct: 265 LRYSWSGEPLFLTCPTSE----VTELPACSQCGGQRIFEFQLMPALVSMLKSANLGLSVE 320
Query: 382 WATMVVYTCESSC--EANVSYKEEFVWVQ 408
+ T++VYTCE SC + + EEF +Q
Sbjct: 321 FGTILVYTCEKSCWPPNHQTPMEEFCIIQ 349
>sp|Q09787|YA99_SCHPO Uncharacterized protein C13G6.09 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC13G6.09 PE=4 SV=1
Length = 274
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 259 EMINEDESEYDTEMSEVNGQTNALVSKTGVDDTMKSLLDSFEGDSDRRSWATFQEHLAKA 318
++I+ E E D E E N + K DT + + S+ FQ+ L++A
Sbjct: 113 KLIDSSEIEVDAEPKEENKKEIPEKLKNVKVDTENPSAEPYTKAKGDVSFLKFQKRLSRA 172
Query: 319 PEQVLRYCRSAGAK--ALWPTSSGQLSKADIPKCSYCGGPRCFEFQILPQLLFYFGVSND 376
P+Q++RY + + LW + + + IP C+ CG R EFQILP L+ + +
Sbjct: 173 PDQIMRYYHATSNEFPGLW--CNNECIPSSIPNCA-CGAKRQLEFQILPTLISSMNIDHS 229
Query: 377 V-DSLDWATMVVYTCESSCE-ANVSYKEEFVWVQ 408
++LDW + +Y C +SC+ AN EE W+Q
Sbjct: 230 AKNALDWGILSIYVCSASCDLANCGLAEELCWLQ 263
>sp|P87156|TSR4_SCHPO Probable 20S rRNA accumulation protein 4 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC25H2.15 PE=3 SV=1
Length = 396
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 306 RSWATFQEHLAKAPEQVLRYCRSAGAKALWPTSSGQLS----------KADIPKCSYCGG 355
+++ F E ++ P Q LRY R G L + +L K+ +P C C
Sbjct: 283 KTFRLFSEKISHNPTQCLRYER--GGTPLLASGRDKLGQQLKSVTNFGKSPVPLCPLCKS 340
Query: 356 PRCFEFQILPQLLFYFGVSNDVDSLDWATMVVYTCESSCEA-----NVSYKEEFVWVQ 408
PR FE Q++P + + ND + +W+T++V TC C V Y E+V +Q
Sbjct: 341 PRLFEMQLMPHAI---SILND-EIAEWSTILVATCSMDCNPPINKDRVGYAVEWVGIQ 394
>sp|P25040|TSR4_YEAST 20S rRNA accumulation protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=TSR4 PE=1 SV=2
Length = 408
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 156/421 (37%), Gaps = 80/421 (19%)
Query: 40 DEDDGEDEEEQKPVTLGFLEKP-KNRWSLLRHLFPSKAGGPPAWLDPINLPTGRSCLCDM 98
D DD + V L F++ P K +L S GG P WL P + P C
Sbjct: 11 DTDDHSYSSKPGDVFLAFVDAPVKETDDILVE--DSFIGGEPKWLHPDSEPPAELLKCGA 68
Query: 99 C--GEPLQFVLQVYAPIIEKESTF-----------------HRTLFLFMCP-------SM 132
C + ++ +LQ ++P+ +++ + R L++F+C S+
Sbjct: 69 CKSADNMKLLLQAFSPLDDEQMSAIQQRLGINNMSYINPQDDRVLYVFLCTECQRKGNSV 128
Query: 133 ACLRRDQHEQWKRPPEKASRSVKVFRCQLPRS---NPY--YSSEPPKCNGTDKPSGPGVS 187
C+R K+ S S K+ L + NP+ ++ KCN
Sbjct: 129 RCIR-----GVKKNKNVDSLSEKMASTSLEKDFQINPFDLSNNSDSKCNAFS-------- 175
Query: 188 LCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLNLSSPSSDSNLADA--- 244
N G + + ++ Q K + G K E ++ + +L
Sbjct: 176 -SNPFGGANANPFGADSINSNISQSKDE------GKKKESATVSAKTARKLHDLQKDKEY 228
Query: 245 -GTTSVASNSLWPEYEMINEDESEY---------DTEMSEVNGQTNALVSKTGVDDTMKS 294
G S L+ E E + + D E ++ G + +D +
Sbjct: 229 DGNKCFKSCLLYVEEETFKNKKPAHLQLPKNLKIDKEALDLTGDEDLEKDPIKLDPRTEK 288
Query: 295 LLDSFEGDSDRRSWATFQEHLAKAPEQVLRYCRSAGAKALWPTSSGQLSKADIPKCSYC- 353
L + D+ + FQE + P QVLRY G K L + + +P+ Y
Sbjct: 289 LSKFLDDDT----FQKFQEVVGYNPLQVLRY--DLGGKPLLYAETKVDILSTVPRPGYNP 342
Query: 354 GGPRCFEFQILPQLLFYFGVSNDVDS-LDWATMVVYTCESSC-----EANVSYKEEFVWV 407
R FE Q++P+++F VD+ ++W T++V+T + E V Y EE V V
Sbjct: 343 SSQRIFEMQLMPKMIFDLEEVVSVDNGMEWGTILVFTDVENYMPEFDEHGVGYVEECVKV 402
Query: 408 Q 408
Q
Sbjct: 403 Q 403
>sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana
GN=UBP16 PE=2 SV=1
Length = 1008
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 26/78 (33%)
Query: 201 CSSCRRAHYCQQKHQVTHWRSGHKVECQQLNLSSPSSDSNLADAGTTSVASNSLWPEYEM 260
CS C+ YC K Q+ HWR GHK EC ++ S
Sbjct: 85 CSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYDS------------------------ 120
Query: 261 INEDESEYDTEMSEVNGQ 278
EDES+ D + E NGQ
Sbjct: 121 --EDESDSDLRLGEENGQ 136
>sp|Q9FKP5|UBP17_ARATH Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana
GN=UBP17 PE=2 SV=1
Length = 731
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 201 CSSCRRAHYCQQKHQVTHWRSGHKVECQ 228
CS C+ YC K Q+ HWR GHK EC+
Sbjct: 68 CSQCKSVRYCSSKCQILHWRRGHKEECR 95
>sp|Q5ZMD2|ANKY2_CHICK Ankyrin repeat and MYND domain-containing protein 2 OS=Gallus
gallus GN=ANKMY2 PE=2 SV=1
Length = 460
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 188 LCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLN 231
C CG DK CS C+ YC Q Q THW + HK C+ L
Sbjct: 319 FCTTCGEKGADKRCSVCKVVMYCDQNCQKTHWFT-HKKVCKTLK 361
>sp|Q3TPE9|ANKY2_MOUSE Ankyrin repeat and MYND domain-containing protein 2 OS=Mus musculus
GN=Ankmy2 PE=1 SV=1
Length = 440
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 186 VSLCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLN-------LSSPSSD 238
V C CG K CS C+ YC Q Q THW + HK C+ L + +
Sbjct: 317 VEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFA-HKKMCKSLKDVYEKQQIEAAKHK 375
Query: 239 SNLADAGTTSVASNSLWPEYEMINEDESEYDTEMSEVN 276
G +V+SN +NED+ E + +++ N
Sbjct: 376 RQEEKNGNPNVSSNH-------VNEDQPEAEEGITQEN 406
>sp|Q09415|SET14_CAEEL SET domain-containing protein 14 OS=Caenorhabditis elegans
GN=set-14 PE=4 SV=2
Length = 429
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 187 SLCNWCGTWKGD-KVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLNLSSPSSDSNL 241
S CN C T + K CS+CRR YC Q+ Q W+ HKVEC+ + + ++ ++
Sbjct: 24 SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAIKTHNEVANDSI 78
>sp|Q8IV38|ANKY2_HUMAN Ankyrin repeat and MYND domain-containing protein 2 OS=Homo sapiens
GN=ANKMY2 PE=1 SV=1
Length = 441
Score = 39.3 bits (90), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 186 VSLCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLN-------LSSPSSD 238
V C CG K CS C+ YC Q Q THW + HK C+ L L +
Sbjct: 317 VEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFT-HKKICKNLKDIYEKQQLEAAKEK 375
Query: 239 SNLADAGTTSVASNSLWPEYEMINEDESEYDTEMSE 274
+ G V SN +NE++ E + +S+
Sbjct: 376 RQEENHGKLDVNSNC-------VNEEQPEAEVGISQ 404
>sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana
GN=UBP19 PE=2 SV=2
Length = 672
Score = 39.3 bits (90), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 189 CNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQ 228
C+ CG K CS C+ YC Q + W+SGHK++C+
Sbjct: 64 CSVCGKATTKK-CSRCKSVRYCSAACQTSDWKSGHKLKCK 102
>sp|Q0VCS9|ANKY2_BOVIN Ankyrin repeat and MYND domain-containing protein 2 OS=Bos taurus
GN=ANKMY2 PE=2 SV=1
Length = 442
Score = 38.9 bits (89), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 186 VSLCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQL 230
V C CG K CS C+ YC Q Q THW + HK C+ L
Sbjct: 317 VEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFA-HKKICKNL 360
>sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana
GN=UBP18 PE=2 SV=2
Length = 631
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 189 CNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLNLS--SPSSDSNL 241
C+ CG + K CS C+ YC + Q + W SGH+ C+ ++ +PS+ + L
Sbjct: 61 CSVCGNFSTKK-CSRCKSVRYCSAECQRSDWSSGHQRNCRDYGITTLTPSAKNGL 114
>sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana
GN=UBP15 PE=2 SV=2
Length = 924
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 201 CSSCRRAHYCQQKHQVTHWRSGHKVEC 227
CS C+ YC K Q+ HWR HK EC
Sbjct: 141 CSRCKSVRYCSGKCQIIHWRVAHKDEC 167
>sp|Q9FK27|FB342_ARATH F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2
SV=1
Length = 336
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 201 CSSCRRAHYCQQKHQVTHWRSGHKVECQQLNL 232
CS C + +YC + Q WR+ HKVEC L+L
Sbjct: 279 CSVCGKVNYCSRGCQALDWRAKHKVECTPLDL 310
>sp|Q99MV1|TDRD1_MOUSE Tudor domain-containing protein 1 OS=Mus musculus GN=Tdrd1 PE=1
SV=2
Length = 1172
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 147 PEKASRSVKVFRCQLPRSNP--YYSSEPPKCNGTDKPSGPGVSLCNWCGTWKGDKVCSSC 204
PEK+ +S K+F L +NP + S PP + T C+ CG + G CS C
Sbjct: 129 PEKSKKSHKLFENALSVNNPALFNSLGPPLRSTT----------CHRCGLF-GSLRCSQC 177
Query: 205 RRAHYCQQKHQVTHWRSGHKVECQQLNLSSPSSDSNLADAGTTSVASNS 253
++ +YC Q W S H C+ + S + N + T ++ S
Sbjct: 178 KQTYYCSTACQRRDW-SSHSTICRPVQQSLNKLEDNKSPFETKAIEVKS 225
>sp|Q91YE3|EGLN1_MOUSE Egl nine homolog 1 OS=Mus musculus GN=Egln1 PE=2 SV=2
Length = 400
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Query: 182 SGPGV--------SLCNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQ 228
GPGV C CG + C CR + YC ++HQ W+ HK+ CQ
Sbjct: 6 GGPGVLSASERDRQYCELCGKMENLLRCGRCRSSFYCCKEHQRQDWKK-HKLVCQ 59
>sp|Q9GZT9|EGLN1_HUMAN Egl nine homolog 1 OS=Homo sapiens GN=EGLN1 PE=1 SV=1
Length = 426
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 189 CNWCGTWKGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQ 228
C CG + CS CR + YC ++HQ W+ HK+ CQ
Sbjct: 21 CELCGKMENLLRCSRCRSSFYCCKEHQRQDWKK-HKLVCQ 59
>sp|Q9P327|PLB4_SCHPO Putative lysophospholipase C977.09c/C1348.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC977.09c PE=2 SV=1
Length = 673
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 232 LSSPSSDSNLADAGTTSVASNSLWPEYEMINEDESEY-DTEMSEVNGQTNALVSKTGVDD 290
L S+D++ A T N L P E +NE E Y + +S+VN + + +SKTG++
Sbjct: 59 LVKRSTDASYAPFNVTCSNDNLLRPASEGLNEGEQSYINKRISKVNSELRSFISKTGLNV 118
Query: 291 TMKSLLDSFEG 301
+ +++S +G
Sbjct: 119 DLDKVVNSSDG 129
>sp|Q5RGL7|SMY2B_DANRE N-lysine methyltransferase SMYD2-B OS=Danio rerio GN=smyd2b PE=2
SV=2
Length = 434
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 188 LCNWCGTWK-GDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQL 230
+C C T K G C C++A YC Q +W HK+ECQ +
Sbjct: 52 ICEQCFTRKKGLAKCGKCKKAFYCNANCQKKNW-PMHKLECQAM 94
>sp|Q9BXT4|TDRD1_HUMAN Tudor domain-containing protein 1 OS=Homo sapiens GN=TDRD1 PE=2
SV=2
Length = 1180
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 147 PEKASRSVKVFRCQLPRSNP--YYSSEPPKCNGTDKPSGPGVSLCNWCGTWKGDKVCSSC 204
P K+ + K+ L SNP + S PP + T C+ CG + G CS C
Sbjct: 136 PAKSKKLNKLVENSLSISNPGLFTSLGPPLRSTT----------CHRCGLF-GSLRCSQC 184
Query: 205 RRAHYCQQKHQVTHWRSGHKVECQ 228
++ +YC Q W S H + C+
Sbjct: 185 KQTYYCSTACQRRDW-SAHSIVCR 207
>sp|Q54ZX8|Y7331_DICDI SET and MYND domain-containing protein DDB_G0277331
OS=Dictyostelium discoideum GN=DDB_G0277331 PE=3 SV=1
Length = 549
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 196 KGDKVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLN-LSSPSSDSNLADAGTTSVASNSL 254
K K CS+C+ +YC Q W+ HK EC+ L+ + S + N+ TT + +
Sbjct: 85 KTLKRCSNCKLVYYCSTDCQTKAWKI-HKQECKILSTIPSTTDKKNINTKSTTMLLRLFI 143
Query: 255 WPEYEMI 261
E+I
Sbjct: 144 KRNLELI 150
>sp|Q9ZFU6|YPFL_SALTY Uncharacterized protein YpfL OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=ypfL PE=4 SV=2
Length = 425
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 74 SKAGGPPAWLDPINLPTGRSCLCDMCGEPLQFVLQVYAPIIEKESTFHRTLFLFMCPS 131
S+ GG PAW+ + PT C C + + F+ Q+ IE+E L+ F+CPS
Sbjct: 362 SQLGGHPAWVQDTDYPT-----CPTCAQTMMFLAQLSYEDIEEEEYAEGMLYGFICPS 414
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 32.0 bits (71), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 199 KVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLNLSSP 235
K C+ C R YC Q Q THW HK C+ N+ P
Sbjct: 848 KRCTRCYRVGYCNQFCQKTHW-PDHKGLCRPENIGYP 883
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 199 KVCSSCRRAHYCQQKHQVTHWRSGHKVECQQLNLSSP 235
K C+ C R YC Q Q THW HK C+ N+ P
Sbjct: 845 KRCTRCYRVGYCNQFCQKTHW-PDHKGLCRPENIGYP 880
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,917,884
Number of Sequences: 539616
Number of extensions: 7777435
Number of successful extensions: 51499
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 156
Number of HSP's that attempted gapping in prelim test: 43920
Number of HSP's gapped (non-prelim): 5310
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)