BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014985
(415 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/318 (56%), Positives = 228/318 (71%), Gaps = 3/318 (0%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKL 64
K A RY K + LGEG + VYKA D T Q VAIKKI+LG + K+G+N TALREIKL
Sbjct: 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
Query: 65 LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
L+EL P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
+ H+ W+LHRD+KPNNLL+ +G LKLADFGLA+ FGSP+R + HQV RWYRAPELLF
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
GA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF GT T QWPD+ LPD
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
YV ++ PL +F +A DD LDL+ +F ++P ARITA QAL+ +YFS+ P PT
Sbjct: 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 305
Query: 305 KLPRPATKRASKASDFNP 322
+LPRP + NP
Sbjct: 306 QLPRPNCPVETLKEQSNP 323
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 288 bits (737), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 189/287 (65%), Gaps = 3/287 (1%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+ ++Y K E +GEGTYGVVYKA D++ G+ VA+K+IRL + EG+ TA+REI LLKEL
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ LID + L LVFEFME DL+ V+ L + IK Y+ L+G+A CH+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
+LHRD+KP NLLI S G LKLADFGLAR FG P R +TH+V WYRAP++L G+K+Y
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-- 247
VD+W+ GCIFAE++ +P G +D DQL KIF+ GT P +WP + LP + +
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+Q P S+ P + +DLLS M +DP RI+A+ A+ H YF
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 288 bits (737), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 189/287 (65%), Gaps = 3/287 (1%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+ ++Y K E +GEGTYGVVYKA D++ G+ VA+K+IRL + EG+ TA+REI LLKEL
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ LID + L LVFEFME DL+ V+ L + IK Y+ L+G+A CH+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
+LHRD+KP NLLI S G LKLADFGLAR FG P R +TH+V WYRAP++L G+K+Y
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-- 247
VD+W+ GCIFAE++ +P G +D DQL KIF+ GT P +WP + LP + +
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+Q P S+ P + +DLLS M +DP RI+A+ A+ H YF
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 281 bits (719), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 187/300 (62%), Gaps = 2/300 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
A + P +D LLS+M YDP RI+A+ AL H +F P +L RP
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRLERP 306
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 185/297 (62%), Gaps = 2/297 (0%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
S + + + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLK
Sbjct: 5 SPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLA 125
EL P+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLA
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
FCH VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
K Y VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 246 V-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
+ A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 185/297 (62%), Gaps = 2/297 (0%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
S + + + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLK
Sbjct: 5 SPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLA 125
EL P+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLA
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
FCH VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
K Y VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 246 V-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
+ A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+T + + + P IKSY+ L+GLAFCH
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 278 bits (710), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 277 bits (709), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 277 bits (708), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 277 bits (708), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFE + DL+T + + + P IKSY+ L+GLAFCH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GL+FCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+ KIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+ KIRL + EGV TA+REI LLKEL P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V WYRAPE+L G K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 275 bits (702), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/285 (48%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFEF+ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
A + P +D LLS+M YDP RI+A+ AL H +F
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 273 bits (699), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
++Y E +GEGTYGVVYKA G+T A+KKIRL K+ EG+ T +REI +LKELK
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+I++L D K L LVFE ++ DL+ ++ L KS++ L G+A+CH +
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
VLHRD+KP NLLI G+LK+ADFGLAR FG P R++TH+V WYRAP++L G+K+Y
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
+D+W+ GCIFAE++N P G S+ DQL +IF GT WP++ LP Y V
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 252 AAP-PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P P S + +DLLSKM DP RITA+QALEH YF
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
++Y E +GEGTYGVVYKA G+T A+KKIRL K+ EG+ T +REI +LKELK
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+I++L D K L LVFE ++ DL+ ++ L KS++ L G+A+CH +
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
VLHRD+KP NLLI G+LK+ADFGLAR FG P R++TH+V WYRAP++L G+K+Y
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
+D+W+ GCIFAE++N P G S+ DQL +IF GT WP++ LP Y V
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 252 AAP-PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P P S + +DLLSKM DP RITA+QALEH YF
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
++Y E +GEGTYGVVYKA G+T A+KKIRL K+ EG+ T +REI +LKELK
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+I++L D K L LVFE ++ DL+ ++ L KS++ L G+A+CH +
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
VLHRD+KP NLLI G+LK+ADFGLAR FG P R++TH++ WYRAP++L G+K+Y
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
+D+W+ GCIFAE++N P G S+ DQL +IF GT WP++ LP Y V
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 252 AAP-PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P P S + +DLLSKM DP RITA+QALEH YF
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ + K E +GEGTYGVVYKA + TG+ VA+KKIRL + EGV TA+REI LLKEL P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
+I++L+D + L+LVFE ++ DL+ + + + P IKSY+ L+GLAFCH
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V WYRAPE+L G K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
VD+W+ GCIFAE++ RR G S+IDQL +IF GT WP + +PDY +
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
A + P +D LLS+M YDP RI+A+ AL H +F P
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/285 (48%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
+Y K E +GEGTYG V+KA + +T + VA+K++RL EGV +ALREI LLKELK +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 73 IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I+ L D L LVFEF + DL+ + N L P +KS++ LKGL FCH + V
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
LHRD+KP NLLI +G+LKLADFGLAR FG P R ++ +V WYR P++LFGAK Y
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-QY 250
+D+W+AGCIFAEL N RP G+ DQL +IF GT T QWP + LPDY Y Y
Sbjct: 183 IDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242
Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
A L ++ P + DLL + +P RI+A++AL+H YFS
Sbjct: 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/285 (48%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
+Y K E +GEGTYG V+KA + +T + VA+K++RL EGV +ALREI LLKELK +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 73 IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I+ L D L LVFEF + DL+ + N L P +KS++ LKGL FCH + V
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
LHRD+KP NLLI +G+LKLA+FGLAR FG P R ++ +V WYR P++LFGAK Y
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 193 VDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-QY 250
+D+W+AGCIFAEL N RP G+ DQL +IF GT T QWP + LPDY Y Y
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242
Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
A L ++ P + DLL + +P RI+A++AL+H YFS
Sbjct: 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 251 bits (642), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 181/291 (62%), Gaps = 8/291 (2%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
DRY + LGEGTYG VYKAIDT T +TVAIK+IRL ++EGV TA+RE+ LLKEL+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+IIEL H LHL+FE+ E DL+ + + N +S IKS++ + G+ FCH +
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 132 VLHRDMKPNNLLIGSHGQ-----LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
LHRD+KP NLL+ LK+ DFGLAR FG P R+FTH++ WYR PE+L G+
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
+ Y VD+W+ CI+AE+L + P G S+IDQL KIF G + WP + LPD+
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272
Query: 247 EY--QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
+ ++ R L D+ LDLL+ M DP RI+A+ ALEH YFS
Sbjct: 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 182/308 (59%), Gaps = 16/308 (5%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+Y K +G+GT+G V+KA KTGQ VA+KK+ + +KEG TALREIK+L+ LK
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 71 PHIIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
+++ LI+ A P+ KG+++LVF+F E DL ++ N + + ++IK MQM L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYR 178
GL + H+ +LHRDMK N+LI G LKLADFGLAR F S R+ ++V WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
PELL G + YG +D+W AGCI AE+ R P +QG+++ QL I G+ TP WP+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 239 LAYLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYF 294
+ Y + + V ++ + D ALDL+ K+ DP RI + AL H +F
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
Query: 295 SSAPLPTE 302
S P+P++
Sbjct: 317 WSDPMPSD 324
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 230 bits (587), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 182/308 (59%), Gaps = 16/308 (5%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+Y K +G+GT+G V+KA KTGQ VA+KK+ + +KEG TALREIK+L+ LK
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 71 PHIIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
+++ LI+ A P+ KG+++LVF+F E DL ++ N + + ++IK MQM L
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYR 178
GL + H+ +LHRDMK N+LI G LKLADFGLAR F S R+ ++V WYR
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
PELL G + YG +D+W AGCI AE+ R P +QG+++ QL I G+ TP WP+
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
Query: 239 LAYLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYF 294
+ Y + + V ++ + D ALDL+ K+ DP RI + AL H +F
Sbjct: 256 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
Query: 295 SSAPLPTE 302
S P+P++
Sbjct: 316 WSDPMPSD 323
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 182/306 (59%), Gaps = 16/306 (5%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
+Y K +G+GT+G V+KA KTGQ VA+KK+ + +KEG TALREIK+L+ LK +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 73 IIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
++ LI+ A P+ KG+++LVF+F E DL ++ N + + ++IK MQM L GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYRAP 180
+ H+ +LHRDMK N+LI G LKLADFGLAR F S R+ ++V WYR P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
ELL G + YG +D+W AGCI AE+ R P +QG+++ QL I G+ TP WP++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 241 YLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYFSS 296
Y + + V ++ + D ALDL+ K+ DP RI + AL H +F S
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
Query: 297 APLPTE 302
P+P++
Sbjct: 319 DPMPSD 324
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 173/297 (58%), Gaps = 14/297 (4%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+ ++ + E LG GTY VYK ++ TG VA+K+++L + EG TA+REI L+KELK
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKH 62
Query: 71 PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-----IKSYMQMTLKGLA 125
+I+ L D + L LVFEFM+ DL+ + + + +P +K + L+GLA
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
FCH+ +LHRD+KP NLLI GQLKL DFGLAR FG P F+ +V WYRAP++L G
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
++ Y +D+W+ GCI AE++ +P G++D +QL IF GT S WP + LP Y
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242
Query: 246 VEYQYVAAPP--LRSLFPSASDDAL-----DLLSKMFTYDPKARITAQQALEHRYFS 295
PP LR + + + L D L + +P R++A+QAL H +F+
Sbjct: 243 -NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 181/306 (59%), Gaps = 16/306 (5%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
+Y K +G+GT+G V+KA KTGQ VA+KK+ + +KEG TALREIK+L+ LK +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 73 IIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
++ LI+ A P+ K +++LVF+F E DL ++ N + + ++IK MQM L GL
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYRAP 180
+ H+ +LHRDMK N+LI G LKLADFGLAR F S R+ ++V WYR P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
ELL G + YG +D+W AGCI AE+ R P +QG+++ QL I G+ TP WP++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 241 YLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYFSS 296
Y + + V ++ + D ALDL+ K+ DP RI + AL H +F S
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
Query: 297 APLPTE 302
P+P++
Sbjct: 319 DPMPSD 324
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 180/307 (58%), Gaps = 5/307 (1%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
+ Y+K + LGEGTY VYK T VA+K+IRL + +EG TA+RE+ LLK+LK
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHA 60
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+I+ L D + +L LVFE+++ DL+ + + ++ ++K ++ L+GLA+CH++
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
VLHRD+KP NLLI G+LKLADFGLAR P + + ++V WYR P++L G+ Y
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY- 250
+D+W GCIF E+ RP GS+ +QL IF GT T WP + ++ Y Y
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP 240
Query: 251 -VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
A L S P D DLL+K+ ++ + RI+A+ A++H +F S L +KLP
Sbjct: 241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS--LGERIHKLPDT 298
Query: 310 ATKRASK 316
+ A K
Sbjct: 299 TSIFALK 305
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 166/298 (55%), Gaps = 19/298 (6%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+ ++Y K +GEG+YGVV+K + TGQ VAIKK + + ALREI++LK+LK
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF---LSPADIKSYMQMTLKGLAF 126
P+++ L++ F K LHLVFE+ + TV+ + + + +KS TL+ + F
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCD---HTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
CHK +HRD+KP N+LI H +KL DFG AR+ P + +V RWYR+PELL G
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP--------SQWPD 238
QYG VDVWA GC+FAELL+ P G SD+DQL I G P +Q+
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
+PD + + PL FP+ S AL LL DP R+T +Q L H YF +
Sbjct: 238 GVKIPDPEDME-----PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 161/285 (56%), Gaps = 13/285 (4%)
Query: 20 LGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIE 75
+GEG YG V+KA D K G + VA+K++R+ +EG+ + +RE+ +L+ L++ P+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 76 LIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHK 129
L D + L LVFE ++ DL T + P + IK M L+GL F H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HRD+KP N+L+ S GQ+KLADFGLARI+ S T V WYRAPE+L + Y
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPEVLLQSS-Y 196
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD+W+ GCIFAE+ R+P +GSSD+DQLGKI G WP LP +
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-FH 255
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+A P+ + DLL K T++P RI+A AL H YF
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 161/285 (56%), Gaps = 13/285 (4%)
Query: 20 LGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIE 75
+GEG YG V+KA D K G + VA+K++R+ +EG+ + +RE+ +L+ L++ P+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 76 LIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHK 129
L D + L LVFE ++ DL T + P + IK M L+GL F H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HRD+KP N+L+ S GQ+KLADFGLARI+ S T V WYRAPE+L + Y
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPEVLLQSS-Y 196
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD+W+ GCIFAE+ R+P +GSSD+DQLGKI G WP LP +
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-FH 255
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+A P+ + DLL K T++P RI+A AL H YF
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 161/285 (56%), Gaps = 13/285 (4%)
Query: 20 LGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIE 75
+GEG YG V+KA D K G + VA+K++R+ +EG+ + +RE+ +L+ L++ P+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 76 LIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHK 129
L D + L LVFE ++ DL T + P + IK M L+GL F H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HRD+KP N+L+ S GQ+KLADFGLARI+ S T V WYRAPE+L + Y
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPEVLLQSS-Y 196
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD+W+ GCIFAE+ R+P +GSSD+DQLGKI G WP LP +
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-FH 255
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+A P+ + DLL K T++P RI+A AL H YF
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 163/291 (56%), Gaps = 12/291 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-- 70
RY +G G YG VYKA D +G VA+K +R+ +EG+ + +RE+ LL+ L++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 71 -PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKG 123
P+++ L+D + + LVFE ++ DL T + PA+ IK M+ L+G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
L F H ++HRD+KP N+L+ S G +KLADFGLARI+ S V WYRAPE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALAPVVVTLWYRAPEVL 183
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ Y VD+W+ GCIFAE+ R+P G+S+ DQLGKIF G WP LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ P++S+ P + LL +M T++P RI+A +AL+H Y
Sbjct: 243 RGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 163/291 (56%), Gaps = 12/291 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-- 70
RY +G G YG VYKA D +G VA+K +R+ +EG+ + +RE+ LL+ L++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 71 -PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKG 123
P+++ L+D + + LVFE ++ DL T + PA+ IK M+ L+G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
L F H ++HRD+KP N+L+ S G +KLADFGLARI+ S V WYRAPE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALDPVVVTLWYRAPEVL 183
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ Y VD+W+ GCIFAE+ R+P G+S+ DQLGKIF G WP LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ P++S+ P + LL +M T++P RI+A +AL+H Y
Sbjct: 243 RGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 163/291 (56%), Gaps = 12/291 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-- 70
RY +G G YG VYKA D +G VA+K +R+ +EG+ + +RE+ LL+ L++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 71 -PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKG 123
P+++ L+D + + LVFE ++ DL T + PA+ IK M+ L+G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
L F H ++HRD+KP N+L+ S G +KLADFGLARI+ F V WYRAPE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-VVVTLWYRAPEVL 183
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ Y VD+W+ GCIFAE+ R+P G+S+ DQLGKIF G WP LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ P++S+ P + LL +M T++P RI+A +AL+H Y
Sbjct: 243 RGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 165/324 (50%), Gaps = 27/324 (8%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
++ + + +LGEG YGVV A TG+ VAIKKI K LREIK+LK K
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFK 67
Query: 70 SPHIIELI-----DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D+F + ++++ E M+TDL VI LS I+ ++ TL+ +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAV 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP----------DRRFTHQVFA 174
H V+HRD+KP+NLLI S+ LK+ DFGLARI T V
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
RWYRAPE++ + +Y +DVW+ GCI AEL RRP G QL IF G TP
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG--TPH 243
Query: 235 QWPDLAYLPDYVEYQYVA------APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
DL + +Y+ A PL +FP + +DLL +M +DP RITA++A
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 289 LEHRYFSSAPLPT-EPNKLPRPAT 311
LEH Y + P EP P P +
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPS 327
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
++Y ++GEG+YG+V K + TG+ VAIKK + V A+REIKLLK+L+
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCH 128
+++ L++ K +LVFEF++ T++ + +F + D ++ Y+ + G+ FCH
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVD---HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
++HRD+KP N+L+ G +KL DFG AR +P + +V RWYRAPELL G +
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP------SQWPDLA-- 240
YG VDVWA GC+ E+ P G SDIDQL I G P ++ P A
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
LP+ E + PL +P S+ +DL K DP R + L H +F
Sbjct: 262 RLPEIKERE-----PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 165/324 (50%), Gaps = 27/324 (8%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
++ + + +LGEG YGVV A TG+ VAIKKI K LREIK+LK K
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFK 67
Query: 70 SPHIIELI-----DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D+F + ++++ E M+TDL VI LS I+ ++ TL+ +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAV 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP----------DRRFTHQVFA 174
H V+HRD+KP+NLLI S+ LK+ DFGLARI T V
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
RWYRAPE++ + +Y +DVW+ GCI AEL RRP G QL IF G TP
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG--TPH 243
Query: 235 QWPDLAYLPDYVEYQYVA------APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
DL + +Y+ A PL +FP + +DLL +M +DP RITA++A
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 289 LEHRYFSSAPLPT-EPNKLPRPAT 311
LEH Y + P EP P P +
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPS 327
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 168/324 (51%), Gaps = 27/324 (8%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
++ + + +LGEG YGVV A TG+ VAIKKI K LREIK+LK K
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFK 67
Query: 70 SPHIIELI-----DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D+F + ++++ E M+TDL VI LS I+ ++ TL+ +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAV 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQ-------VFA 174
H V+HRD+KP+NLLI S+ LK+ DFGLARI + + T Q V
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
RWYRAPE++ + +Y +DVW+ GCI AEL RRP G QL IF G TP
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG--TPH 243
Query: 235 QWPDLAYLPDYVEYQYVA------APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
DL + +Y+ A PL +FP + +DLL +M +DP RITA++A
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 289 LEHRYFSSAPLPT-EPNKLPRPAT 311
LEH Y + P EP P P +
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPS 327
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFR 81
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 255
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 256 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 295 SSAPLPTE 302
+ P++
Sbjct: 316 AQYYDPSD 323
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 81
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 255
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 256 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 295 SSAPLPTE 302
P++
Sbjct: 316 EQYYDPSD 323
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 254 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
P++
Sbjct: 314 EQYYDPSD 321
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 99
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 157
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 216
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 273
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 274 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Query: 295 SSAPLPTE 302
P++
Sbjct: 334 EQYYDPSD 341
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 29 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 87
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 145
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 146 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 204
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 261
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 262 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
Query: 295 SSAPLPTE 302
P++
Sbjct: 322 EQYYDPSD 329
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 254 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
P++
Sbjct: 314 EQYYDPSD 321
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 254 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
P++
Sbjct: 314 EQYYDPSD 321
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 254 XIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
P++
Sbjct: 314 EQYYDPSD 321
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 84
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 142
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 201
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 258
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 259 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Query: 295 SSAPLPTE 302
P++
Sbjct: 319 EQYYDPSD 326
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 27 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 85
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 144 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 202
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 259
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 260 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
Query: 295 SSAPLPTE 302
P++
Sbjct: 320 EQYYDPSD 327
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 18 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 76
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 134
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 135 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 193
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 250
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 251 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
Query: 295 SSAPLPTE 302
P++
Sbjct: 311 EQYYDPSD 318
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
P++
Sbjct: 318 EQYYDPSD 325
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 77
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 194
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 251
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 252 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Query: 295 SSAPLPTE 302
P++
Sbjct: 312 EQYYDPSD 319
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
P++
Sbjct: 318 EQYYDPSD 325
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
P++
Sbjct: 318 EQYYDPSD 325
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 84
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 142
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAP 201
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 258
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 259 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Query: 295 SSAPLPTE 302
P++
Sbjct: 319 EQYYDPSD 326
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
P++
Sbjct: 318 EQYYDPSD 325
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 254 XIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
P++
Sbjct: 314 EQYYDPSD 321
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT-LREIKILLRFR 83
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
P++
Sbjct: 318 EQYYDPSD 325
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAI+KI + + T LREIK+L +
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
P++
Sbjct: 318 EQYYDPSD 325
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 164/301 (54%), Gaps = 15/301 (4%)
Query: 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL---GKQKEGVNFTALREI 62
L RY +G G YG VYKA D +G VA+K +R+ G G+ + +RE+
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 63 KLLKELKS---PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-I 113
LL+ L++ P+++ L+D + + LVFE ++ DL T + PA+ I
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173
K M+ L+GL F H ++HRD+KP N+L+ S G +KLADFGLARI+ S T V
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALTPVVV 181
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
WYRAPE+L + Y VD+W+ GCIFAE+ R+P G+S+ DQLGKIF G
Sbjct: 182 TLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
WP LP + P++S+ P + LL +M T++P RI+A +AL+H Y
Sbjct: 241 DDWPRDVSLPRGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
Query: 294 F 294
Sbjct: 300 L 300
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFR 81
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 255
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 256 CGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 295 SSAPLPTE 302
+ P++
Sbjct: 316 AQYYDPSD 323
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 171/320 (53%), Gaps = 26/320 (8%)
Query: 2 AEVDLSK----KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT 57
EV++ K V RY + + +GEG YG+V A D VAIKKI + + T
Sbjct: 29 GEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT 88
Query: 58 ALREIKLLKELKSPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
LREI++L + ++I + D ++++V + METDL ++++ LS
Sbjct: 89 -LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDH 145
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----F 168
I ++ L+GL + H VLHRD+KP+NLLI + LK+ DFGLARI P+
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI-ADPEHDHTGFL 204
Query: 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228
T V RWYRAPE++ +K Y +D+W+ GCI AE+L+ RP G +DQL I
Sbjct: 205 TEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKAR 282
G +PSQ DL + + Y+ + P ++ LFP + ALDLL +M T++P R
Sbjct: 265 G--SPSQ-EDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKR 321
Query: 283 ITAQQALEHRYFSSAPLPTE 302
IT ++AL H Y PT+
Sbjct: 322 ITVEEALAHPYLEQYYDPTD 341
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 163/308 (52%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 77
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D ++++V + METDL +++ + LS I ++ L+GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 194
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +P Q DL
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPEQ-EDLN 251
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 252 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Query: 295 SSAPLPTE 302
P++
Sbjct: 312 EQYYDPSD 319
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 161/308 (52%), Gaps = 22/308 (7%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V RY +GEG YG+V A D VAIKKI + + T LREIK+L +
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 99
Query: 70 SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+II + D +++LV M DL +++ + LS I ++ L+GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGL 157
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
+ H VLHRD+KP+NLL+ + LK+ DFGLAR+ PD T V RWYRAP
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 216
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
E++ +K Y +D+W+ GCI AE+L+ RP G +DQL I G +PSQ DL
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 273
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ + Y+ + P ++ LFP+A ALDLL KM T++P RI +QAL H Y
Sbjct: 274 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Query: 295 SSAPLPTE 302
P++
Sbjct: 334 EQYYDPSD 341
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 167/320 (52%), Gaps = 21/320 (6%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D++ V D Y E +G G YGVV A TGQ VAIKKI LRE+K+
Sbjct: 48 DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 107
Query: 65 LKELKSPHIIELIDA------FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
LK K +II + D + ++++V + ME+DL +I ++ L+ ++ ++
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-LTLEHVRYFLY 166
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRR---FTHQVFA 174
L+GL + H V+HRD+KP+NLL+ + +LK+ DFG+AR + SP T V
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
RWYRAPEL+ +Y +D+W+ GCIF E+L RR G + + QL I GT +P+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 235 QWPDL------AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+ AY+ Q V P +++P A AL LL +M ++P ARI+A A
Sbjct: 287 VIQAVGAERVRAYIQSLPPRQPV---PWETVYPGADRQALSLLGRMLRFEPSARISAAAA 343
Query: 289 LEHRYFSSAPLP-TEPNKLP 307
L H + + P EP+ P
Sbjct: 344 LRHPFLAKYHDPDDEPDCAP 363
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 167/320 (52%), Gaps = 21/320 (6%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D++ V D Y E +G G YGVV A TGQ VAIKKI LRE+K+
Sbjct: 47 DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 106
Query: 65 LKELKSPHIIELIDA------FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
LK K +II + D + ++++V + ME+DL +I ++ L+ ++ ++
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-LTLEHVRYFLY 165
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRR---FTHQVFA 174
L+GL + H V+HRD+KP+NLL+ + +LK+ DFG+AR + SP T V
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
RWYRAPEL+ +Y +D+W+ GCIF E+L RR G + + QL I GT +P+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285
Query: 235 QWPDL------AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+ AY+ Q V P +++P A AL LL +M ++P ARI+A A
Sbjct: 286 VIQAVGAERVRAYIQSLPPRQPV---PWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342
Query: 289 LEHRYFSSAPLP-TEPNKLP 307
L H + + P EP+ P
Sbjct: 343 LRHPFLAKYHDPDDEPDCAP 362
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 152/302 (50%), Gaps = 21/302 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G YG V AID ++G+ VAIKK+ Q E A RE+ LLK ++ ++I L+D
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 80 FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
F +L +LV FM+TDL+ ++ + S I+ + LKGL + H V+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+KP NL + +LK+ DFGLAR D T V RWYRAPE++ Y V
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+W+ GCI AE+L + +G +DQL +I G + L D Y+ +
Sbjct: 206 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQS 262
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
P LFP AS A DLL KM D R+TA QAL H +F P E +
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 322
Query: 308 RP 309
+P
Sbjct: 323 QP 324
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 152/302 (50%), Gaps = 21/302 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G YG V AID ++G+ VAIKK+ Q E A RE+ LLK ++ ++I L+D
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 80 FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
F +L +LV FM+TDL+ ++ + S I+ + LKGL + H V+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+KP NL + +LK+ DFGLAR D T V RWYRAPE++ Y V
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+W+ GCI AE+L + +G +DQL +I G + L D Y+ +
Sbjct: 224 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQS 280
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
P LFP AS A DLL KM D R+TA QAL H +F P E +
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 340
Query: 308 RP 309
+P
Sbjct: 341 QP 342
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 162/309 (52%), Gaps = 36/309 (11%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTA--------LREIK 63
Y + + G+YG V +D++ G VAIK++ +G VN + LREI+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV-FNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 64 LLKELKSPHIIELIDAFPH-----KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
LL P+I+ L D F H L+LV E M TDL VI + I +SP I+ +M
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L GL H+ V+HRD+ P N+L+ + + + DF LAR + D TH V RWYR
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE-DTADANKTHYVTHRWYR 200
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT-------- 230
APEL+ K + VD+W+AGC+ AE+ NR+ +GS+ +QL KI GT
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 231 -ATPSQWPDLAYLPDYV--EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
++PS DY+ V A ++ P+A ALDL++KM ++P+ RI+ +Q
Sbjct: 261 FSSPSA-------RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313
Query: 288 ALEHRYFSS 296
AL H YF S
Sbjct: 314 ALRHPYFES 322
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 162/309 (52%), Gaps = 36/309 (11%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTA--------LREIK 63
Y + + G+YG V +D++ G VAIK++ +G VN + LREI+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV-FNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 64 LLKELKSPHIIELIDAFPH-----KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
LL P+I+ L D F H L+LV E M TDL VI + I +SP I+ +M
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L GL H+ V+HRD+ P N+L+ + + + DF LAR + D TH V RWYR
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE-DTADANKTHYVTHRWYR 200
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT-------- 230
APEL+ K + VD+W+AGC+ AE+ NR+ +GS+ +QL KI GT
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 231 -ATPSQWPDLAYLPDYV--EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
++PS DY+ V A ++ P+A ALDL++KM ++P+ RI+ +Q
Sbjct: 261 FSSPSA-------RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313
Query: 288 ALEHRYFSS 296
AL H YF S
Sbjct: 314 ALRHPYFES 322
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 164/349 (46%), Gaps = 65/349 (18%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V D Y+ + ++G G+YG VY A D T + VAIKK+ + LREI +L LK
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 70 SPHIIELID-AFPHK----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
S +II L D P L++V E ++DL+ + + T IFL+ IK+ + L G
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGE 142
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------------- 165
F H+ ++HRD+KP N L+ +K+ DFGLAR S
Sbjct: 143 NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-----------NRRPF 211
++ T V RWYRAPEL+ + Y +D+W+ GCIFAELL NR P
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262
Query: 212 LQGS-----------------SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
GS S+ DQL IF GT T ++ P+ + +Y+
Sbjct: 263 FPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINK-PEVI--KYIKLF 319
Query: 255 P------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
P L+ +PS SDD ++LL M ++P RIT QAL+H Y
Sbjct: 320 PHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 176/347 (50%), Gaps = 54/347 (15%)
Query: 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLL 65
+ + V +Y + LG+G YG+V+K+ID +TG+ VA+KKI Q REI +L
Sbjct: 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMIL 62
Query: 66 KELKS-PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
EL +I+ L++ + +++LVF++METDL VIR NI L P + + +K
Sbjct: 63 TELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR-ANI-LEPVHKQYVVYQLIK 120
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ----------- 171
+ + H +LHRDMKP+N+L+ + +K+ADFGL+R F + RR T+
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI-RRVTNNIPLSINENTEN 179
Query: 172 -----------VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ 220
V RWYRAPE+L G+ +Y G+D+W+ GCI E+L +P GSS ++Q
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 221 LGKIFAAF---------GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLF----------- 260
L +I +P + L + VE + R +F
Sbjct: 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVE---IRQSNKRDIFTKWKNLLLKIN 296
Query: 261 --PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPN 304
+++ALDLL K+ ++P RI+A AL+H + S P EPN
Sbjct: 297 PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPN 343
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 155
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 212
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ A Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 156
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 213
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 260 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 29 EVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 88
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 146
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 147 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 203
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 263
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 264 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 319
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 158/320 (49%), Gaps = 42/320 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQT--VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+G GTYG VYKA A+K+I + G++ +A REI LL+ELK P++I L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISLQ 84
Query: 78 DAFPHKGN--LHLVFEFMETDLETVIR--------NTNIFLSPADIKSYMQMTLKGLAFC 127
F + + L+F++ E DL +I+ + L +KS + L G+ +
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 128 HKKWVLHRDMKPNNLLIGSHG----QLKLADFGLARIFGSPDRRFTH---QVFARWYRAP 180
H WVLHRD+KP N+L+ G ++K+AD G AR+F SP + V WYRAP
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG-SSDI--------DQLGKIFAAFGTA 231
ELL GA+ Y +D+WA GCIFAELL P DI DQL +IF G
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 264
Query: 232 TPSQWPDLAYLP-------DYVEYQYVAAPPLRSLFPSA---SDDALDLLSKMFTYDPKA 281
W D+ +P D+ Y ++ + A LL K+ T DP
Sbjct: 265 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIK 324
Query: 282 RITAQQALEHRYFSSAPLPT 301
RIT++QA++ YF PLPT
Sbjct: 325 RITSEQAMQDPYFLEDPLPT 344
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 169/299 (56%), Gaps = 33/299 (11%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVV++A ++ + VAIKK+ K+ + RE+++++ +K P++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN------RELQIMRIVKHPNV 94
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRNTNIF------LSPADIKSYMQMTL 121
++L F G+ L+LV E++ ETV R + + + IK YM L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVP---ETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIF--GSPDRRFTHQVFARWYR 178
+ LA+ H + HRD+KP NLL+ G LKL DFG A+I G P+ + +R+YR
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSXICSRYYR 208
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APEL+FGA Y +D+W+ GC+ AEL+ +P G S IDQL +I GT + Q
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268
Query: 239 LAYLPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+ P+Y+E+++ + P +F P DA+DL+S++ Y P AR+TA +AL H +F
Sbjct: 269 MN--PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 155/310 (50%), Gaps = 15/310 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 300 P-TEPNKLPR 308
P EP PR
Sbjct: 314 PDDEPVADPR 323
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 156
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D V RWYRAPE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXVATRWYRAPEI 213
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 152/301 (50%), Gaps = 21/301 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G YG V A D + Q VA+KK+ Q RE++LLK LK ++I L+D
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 80 FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
F ++ +LV M DL ++++ LS ++ + L+GL + H ++
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQA--LSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+KP+N+ + +L++ DFGLAR D T V RWYRAPE++ Y V
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+W+ GCI AELL + GS IDQL +I GT +P LA + Y+ +
Sbjct: 211 DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV---LAKISSEHARTYIQS 267
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPNKL 306
P L S+F A+ A+DLL +M D R++A +AL H YFS P EP
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 327
Query: 307 P 307
P
Sbjct: 328 P 328
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 159
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 216
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL ++++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGL R D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 148
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 205
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 148
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 205
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 133
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 190
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 156/312 (50%), Gaps = 21/312 (6%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V + D K+G +A+KK+ Q RE++LLK +
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 69 KSPHIIELIDAFPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F +L +LV M DL +++ L+ ++ + L+
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 165
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 222
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ I+QL +I GT S ++ +
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV---ISRM 279
Query: 243 PDYVEYQYVAAPP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
P + Y+ + P +F A+ A+DLL KM D RITA +AL H YFS
Sbjct: 280 PSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
Query: 297 APLP-TEPNKLP 307
P EP P
Sbjct: 340 YHDPDDEPESEP 351
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G YG V A+D +TG VAIKK+ Q E A RE++LLK ++ ++I L+D
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 80 FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
F L +LV FM TDL ++++ L I+ + LKGL + H ++
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+KP NL + +LK+ DFGLAR D V RWYRAPE++ +Y V
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+W+ GCI AE++ + +GS +DQL +I GT P+++ + L Y+
Sbjct: 208 DIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP-PAEF--VQRLQSDEAKNYMKG 264
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
P S+ +AS A++LL KM D + R+TA +AL H YF S
Sbjct: 265 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 24 EVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 148
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 205
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 147
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 204
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 155
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 212
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 273 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 156
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 213
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 274 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 18 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 135
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 136 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 192
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 252
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 253 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 134
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 135 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 191
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 251
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 252 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 307
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 147
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 204
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 133
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D T V RWYRAPE+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 190
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D V RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q +A P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 151/301 (50%), Gaps = 21/301 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G YG V A D + Q VA+KK+ Q RE++LLK LK ++I L+D
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 80 FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
F ++ +LV M DL +++ LS ++ + L+GL + H ++
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA--LSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+KP+N+ + +L++ DFGLAR D T V RWYRAPE++ Y V
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+W+ GCI AELL + GS IDQL +I GT +P LA + Y+ +
Sbjct: 211 DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV---LAKISSEHARTYIQS 267
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPNKL 306
P L S+F A+ A+DLL +M D R++A +AL H YFS P EP
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 327
Query: 307 P 307
P
Sbjct: 328 P 328
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 151/301 (50%), Gaps = 21/301 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G YG V A D + Q VA+KK+ Q RE++LLK LK ++I L+D
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 80 FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
F ++ +LV M DL +++ LS ++ + L+GL + H ++
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA--LSDEHVQFLVYQLLRGLKYIHSAGII 145
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+KP+N+ + +L++ DFGLAR D T V RWYRAPE++ Y V
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTV 202
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+W+ GCI AELL + GS IDQL +I GT +P LA + Y+ +
Sbjct: 203 DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV---LAKISSEHARTYIQS 259
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPNKL 306
P L S+F A+ A+DLL +M D R++A +AL H YFS P EP
Sbjct: 260 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 319
Query: 307 P 307
P
Sbjct: 320 P 320
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ D+GLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 159
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR D V RWYRAPE+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYVATRWYRAPEI 216
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 30/316 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+ RY+ + LG G G+V+ A+D + VAIKKI L + + ALREIK+++ L
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKH--ALREIKIIRRLD 66
Query: 70 SPHIIELIDAFPHKGN--------------LHLVFEFMETDLETVIRNTNIFLSPADIKS 115
+I+++ + G+ +++V E+METDL V+ + A +
Sbjct: 67 HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA--RL 124
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQ--- 171
+M L+GL + H VLHRD+KP NL I + LK+ DFGLARI D ++H+
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHL 181
Query: 172 ---VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228
+ +WYR+P LL Y +D+WAAGCIFAE+L + G+ +++Q+ I +
Sbjct: 182 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241
Query: 229 GTATPSQWPD-LAYLPDYVEYQYVA-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
+ L+ +P Y+ PL L P S +A+D L ++ T+ P R+TA+
Sbjct: 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301
Query: 287 QALEHRYFSSAPLPTE 302
+AL H Y S P +
Sbjct: 302 EALSHPYMSIYSFPMD 317
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DF LAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR T V RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ GK + RE++++++L +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR T V RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ DFGLAR T V RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ FGLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ D GLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 161/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ GK + RE++++++L +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+ + + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 252 -PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ D GLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +RY +G G YG V A DTKTG VA+KK+ Q RE++LLK +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
K ++I L+D F P + +++LV M DL +++ L+ ++ + L+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
GL + H ++HRD+KP+NL + +LK+ D GLAR D T V RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ Y VD+W+ GCI AELL R G+ IDQL I GT ++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Q + P ++F A+ A+DLL KM D RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 160/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ GK + RE++++++L +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+ + + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 252 -PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 226
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 286 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 111
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 228
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 287
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 288 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 113
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 230
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 289
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 290 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 103
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 164 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 220
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 279
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 280 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 154
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 215 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 271
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 330
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 331 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 161/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 226
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 286 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 80
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 141 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 197
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 256
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 257 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 88
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 205
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 264
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 265 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 161/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 204
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 264 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 161/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 94
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 211
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 270
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 271 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 168/310 (54%), Gaps = 30/310 (9%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
+PN KLP
Sbjct: 310 --RDPNVKLP 317
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 161/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 83
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 200
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 259
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 260 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 161/296 (54%), Gaps = 26/296 (8%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 204
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 264 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
+PN KLP
Sbjct: 310 --RDPNVKLP 317
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 79
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 196
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 255
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 256 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 313
Query: 299 LPTEPN-KLP 307
+PN KLP
Sbjct: 314 --RDPNVKLP 321
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
+PN KLP
Sbjct: 310 --RDPNVKLP 317
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 76
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 193
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 252
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 253 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 310
Query: 299 LPTEPN-KLP 307
+PN KLP
Sbjct: 311 --RDPNVKLP 318
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +V+G G++GVVY+A +G+ VAIKK+ K+ + RE++++++L +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74 IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
+ L F G L+LV +++ + V R+ L +K YM + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
A+ H + HRD+KP NLL+ LKL DFG A+ + G P+ + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L+FGA Y + +DVW+AGC+ AELL +P G S +DQL +I GT T Q ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
P+Y E+++ + A P +F P +A+ L S++ Y P AR+T +A H +F
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
+PN KLP
Sbjct: 310 --RDPNVKLP 317
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 163/355 (45%), Gaps = 73/355 (20%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
++ DRY R ++G G+YG V +A D + VAIKKI + LREI +L L
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 69 KSPHIIELIDAFPHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
H+++++D K L++V E ++D + + R T ++L+ IK+ + L G
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHIKTLLYNLLVG 168
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------------ 165
+ + H +LHRD+KP N L+ +K+ DFGLAR P+
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 166 ---------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--------- 207
R+ T V RWYRAPEL+ + Y +DVW+ GCIFAELLN
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288
Query: 208 --RRPFLQGSS--------------------DIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
R P GSS + DQL IF G TPS+ D+ L
Sbjct: 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILG--TPSE-EDIEALEKE 345
Query: 246 VEYQYVAAPPLR------SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+Y+ P R FP++S DA+ LL +M ++P RIT + L H +F
Sbjct: 346 DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 158/353 (44%), Gaps = 68/353 (19%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
KV D Y + ++G G+YG VY A D + VAIKK+ + LREI +L L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 69 KSPHIIELID-AFPHK----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
KS +II L D P L++V E ++DL+ + + T IFL+ +K+ + L G
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEQHVKTILYNLLLG 143
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------------ 165
F H+ ++HRD+KP N L+ +K+ DFGLAR S
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 166 -------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-----------N 207
++ T V RWYRAPEL+ + Y +D+W+ GCIFAELL N
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTN 263
Query: 208 RRPFLQGS-----------------SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
R P GS S+ DQL IF GT P + DL + +Y
Sbjct: 264 RFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTP-PEE--DLKCITKQEVIKY 320
Query: 251 VAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
+ P R + S S + +DLL M ++ + RIT +AL H Y
Sbjct: 321 IKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDV 373
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 160/323 (49%), Gaps = 25/323 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + + +G G G+V A DT G VA+KK+ Q + A RE+ L
Sbjct: 15 DSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL 74
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
LK + +II L++ F P K +++LV E M+ +L VI ++ L + +
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLY 131
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR S + T V R+YR
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ASTNFMMTPYVVTRYYR 190
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI EL+ QG+ IDQ K+ GT +
Sbjct: 191 APEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 249
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y +A L +FPS S+ A DLLSKM DP RI+
Sbjct: 250 LQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 309
Query: 285 AQQALEHRYFSSAPLPTEPNKLP 307
+AL H Y + P E P
Sbjct: 310 VDEALRHPYITVWYDPAEAEAPP 332
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 159/323 (49%), Gaps = 25/323 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + + +G G G+V A DT G VA+KK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
LK + +II L++ F P K +++LV E M+ +L VI ++ L + +
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR + T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ACTNFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y A VD+W+ GCI EL+ QG+ IDQ K+ GT +
Sbjct: 193 APEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + L +FPS S+ A DLLSKM DP RI+
Sbjct: 252 LQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 311
Query: 285 AQQALEHRYFSSAPLPTEPNKLP 307
+AL H Y + P E P
Sbjct: 312 VDEALRHPYITVWYDPAEAEAPP 334
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 10 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 126
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 185
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 305 VDDALQHPYINVWYDPAE 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 55 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 171
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 230
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 350 VDDALQHPYINVWYDPAE 367
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 55 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 171
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 230
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 350 VDDALQHPYINVWYDPAE 367
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 155/311 (49%), Gaps = 25/311 (8%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFS 295
AL+H Y +
Sbjct: 312 VDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 18 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 134
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 313 VDDALQHPYINVWYDPAE 330
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 18 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 134
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 313 VDDALQHPYINVWYDPAE 330
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 16 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 75
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 132
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 191
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 192 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 250
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 251 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 310
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 311 VDDALQHPYINVWYDPAE 328
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 127
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 186
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 187 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 306 VDDALQHPYINVWYDPAE 323
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 10 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 126
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 185
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 305 VDDALQHPYINVWYDPAE 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 127
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 186
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 187 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 285 AQQALEHRYFSSAPLPTE 302
AL+H Y + P E
Sbjct: 306 VDDALQHPYINVWYDPAE 323
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 155/311 (49%), Gaps = 25/311 (8%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K +++LV E M+ +L VI+ + L + +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
L + +YVE Y + P L SLFP+ S+ A DLLSKM DP RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFS 295
AL+H Y +
Sbjct: 312 VDDALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT +P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT +P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT +P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T +V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPEVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNALKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT +P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT +P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 18 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 134
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT P
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 253 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 312 SVDEALQHPYINVWYDPSEAEAPPPKIP 339
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 22 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 81
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 138
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 197
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 198 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 256
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 257 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 315
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 316 SVDEALQHPYINVWYDPSEAEAPPPKIP 343
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ +V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMEPEVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P+
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKK 251
Query: 239 LA-----YL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRNYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 127
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 186
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 187 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 246 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 304
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 305 SVDEALQHPYINVWYDPSEAEAPPPKIP 332
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ +V R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMEPEVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ + G IDQ K+ GT P
Sbjct: 193 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 158/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 19 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 78
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 135
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ V R+YR
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMVPFVVTRYYR 194
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ GCI E++ G+ IDQ K+ GT P
Sbjct: 195 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 253
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 254 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 312
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 313 SVDEALQHPYINVWYDPSEAEAPPPKIP 340
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ G I E++ G+ IDQ K+ GT +P
Sbjct: 193 APEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
D + V RY + +G G G+V A D + VAIKK+ Q + A RE+ L
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65 LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
+K + +II L++ F P K ++++V E M+ +L VI+ + L + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L G+ H ++HRD+KP+N+++ S LK+ DFGLAR G+ T V R+YR
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ G Y VD+W+ G I E++ G+ IDQ K+ GT +P
Sbjct: 193 APEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
L Y+ P Y Y + P LFP+ S+ A DLLSKM D RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
+ +AL+H Y + P+E P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+ + REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNK-----IKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 174/383 (45%), Gaps = 67/383 (17%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+ +Y + LG G++G+V + D ++G+ A+KK+ + + RE+ ++K L
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN------RELDIMKVLDH 59
Query: 71 PHIIELIDAFPHKGN--------------------------------------LHLVFEF 92
+II+L+D F G+ L+++ E+
Sbjct: 60 VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 93 METDLETVIRNTNIFLS-----PADIKS-YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146
+ L V+++ F+ P ++ S Y+ + + F H + HRD+KP NLL+ S
Sbjct: 120 VPDTLHKVLKS---FIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 147 H-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL 205
LKL DFG A+ P + +R+YRAPEL+ GA +Y +D+W+ GC+F EL
Sbjct: 177 KDNTLKLCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Query: 206 LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY--VAAPPLRSLFPSA 263
+ +P G + IDQL +I GT T Q + P Y E ++ + A R + P
Sbjct: 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHYTEVRFPTLKAKDWRKILPEG 293
Query: 264 SDD-ALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP-----NKLPRPATKRASKA 317
+ A+DLL ++ Y+P RI +A+ H +F E + P + +
Sbjct: 294 TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQL 353
Query: 318 SDFNPQEGPTVLSPPRKTRRVMP 340
+F+P E + P R++P
Sbjct: 354 FNFSPYELSII--PGNVLNRILP 374
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 154/323 (47%), Gaps = 30/323 (9%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
S+K DR+ + G+GT+G V + TG +VAIKK+ Q L+ ++ L
Sbjct: 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV---IQDPRFRNRELQIMQDLA 74
Query: 67 ELKSPHIIELIDAFPHKGN-------LHLVFEFMETDLETVIRN---TNIFLSPADIKSY 116
L P+I++L F G L++V E++ L RN + P IK +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 117 MQMTLKGLAFCH--KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVF 173
+ ++ + H V HRD+KP+N+L+ + G LKL DFG A+ SP +
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-SPSEPNVAYIC 193
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
+R+YRAPEL+FG + Y VD+W+ GCIFAE++ P +G + QL +I G +
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSAS----DDALDLLSKMFTYDPKARITAQQAL 289
L V+ P ++F S +A DLLS + Y P+ R+ +AL
Sbjct: 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313
Query: 290 EHRYFSSAPLPTEPNKLPRPATK 312
H YF ++L PATK
Sbjct: 314 CHPYF---------DELHDPATK 327
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 35/292 (11%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
+DRY + VLG+G++G V D TGQ A+K I R KQK + LRE++LLK+L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 83
Query: 69 KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L + F KG +LV E + +L I + F S D ++ L G+ +
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 142
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
HK ++HRD+KP NLL+ S + +++ DFGL+ F + ++ ++ +Y APE+L
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLH 201
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
G Y DVW+ G I LL+ P G+++ D L K+ T QW
Sbjct: 202 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 251
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
S+ A DL+ KM TY P RI+A+ AL+H + +
Sbjct: 252 ----------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 35/292 (11%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
+DRY + VLG+G++G V D TGQ A+K I R KQK + LRE++LLK+L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 106
Query: 69 KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L + F KG +LV E + +L I + F S D ++ L G+ +
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 165
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
HK ++HRD+KP NLL+ S + +++ DFGL+ F ++ ++ +Y APE+L
Sbjct: 166 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLH 224
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
G Y DVW+ G I LL+ P G+++ D L K+ T QW
Sbjct: 225 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 274
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
S+ A DL+ KM TY P RI+A+ AL+H + +
Sbjct: 275 ----------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 35/292 (11%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
+DRY + VLG+G++G V D TGQ A+K I R KQK + LRE++LLK+L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 107
Query: 69 KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L + F KG +LV E + +L I + F S D ++ L G+ +
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 166
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
HK ++HRD+KP NLL+ S + +++ DFGL+ F ++ ++ +Y APE+L
Sbjct: 167 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLH 225
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
G Y DVW+ G I LL+ P G+++ D L K+ T QW
Sbjct: 226 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 275
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
S+ A DL+ KM TY P RI+A+ AL+H + +
Sbjct: 276 ----------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 35/292 (11%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
+DRY + VLG+G++G V D TGQ A+K I R KQK + LRE++LLK+L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 89
Query: 69 KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L + F KG +LV E + +L I + F S D ++ L G+ +
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 148
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
HK ++HRD+KP NLL+ S + +++ DFGL+ F ++ ++ +Y APE+L
Sbjct: 149 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLH 207
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
G Y DVW+ G I LL+ P G+++ D L K+ T QW +
Sbjct: 208 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV----- 260
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
S+ A DL+ KM TY P RI+A+ AL+H + +
Sbjct: 261 -------------------SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + VA+K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVAVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N+LI H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVLIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 35/292 (11%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
+DRY + VLG+G++G V D TGQ A+K I R KQK + LRE++LLK+L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 83
Query: 69 KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I +L + F KG +LV E + +L I + F S D ++ L G+ +
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYX 142
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
HK ++HRD+KP NLL+ S + +++ DFGL+ F + ++ ++ +Y APE+L
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKXKDKIGTAYYIAPEVLH 201
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
G Y DVW+ G I LL+ P G+++ D L K+ T QW
Sbjct: 202 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 251
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
S+ A DL+ K TY P RI+A+ AL+H + +
Sbjct: 252 ----------------KKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 38/310 (12%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
A+RY +LG+G++G V K D T Q A+K I K T LRE++LLK+L
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 71 PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L + + ++V E + +I+ S D ++ G+ + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 129 KKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
K ++HRD+KP N+L+ S + +K+ DFGL+ F + + ++ +Y APE+L G
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG 197
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
Y DVW+AG I LL+ P G ++ D L ++ QW
Sbjct: 198 T--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--------- 246
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH----RYFSSAPLPT 301
+ SDDA DL+ KM T+ P RITA Q LEH +Y S P +
Sbjct: 247 ---------------RTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTIS 291
Query: 302 EPNKLPRPAT 311
+ L T
Sbjct: 292 DLPSLESAMT 301
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 149/324 (45%), Gaps = 43/324 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTAL-REIKLLKEL 68
D Y EV+G+G + VV + I+ +TGQ A+K + + K G++ L RE + L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFME-TDL--ETVIR-NTNIFLSPADIKSYMQMTLKGL 124
K PHI+EL++ + G L++VFEFM+ DL E V R + S A YM+ L+ L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+CH ++HRD+KP N+L+ S +KL DFG+A G +V + APE
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
++ + YG VDVW G I LL+ G+ + G I + P QW +
Sbjct: 204 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY-KMNPRQWSHI-- 259
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH-------RYF 294
S+ A DL+ +M DP RIT +AL H RY
Sbjct: 260 ----------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 297
Query: 295 SSAPLPTEPNKLPRPATKRASKAS 318
LP +L + +R K +
Sbjct: 298 YKIHLPETVEQLRKFNARRKLKGA 321
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 25/290 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + ++ + K RE+K+L+ L+ +II+LID
Sbjct: 46 LGRGKYSEVFEAINITNNE-----RVVVKILKPVKKKKIKREVKILENLRGGTNIIKLID 100
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE++ TD + + + L+ DI+ YM LK L +CH K ++HR
Sbjct: 101 TVKDPVSKTPALVFEYINNTDFKQLYQ----ILTDFDIRFYMYELLKALDYCHSKGIMHR 156
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 157 DVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLD 215
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
+W+ GC+ A ++ RR PF G + DQL +I GT + ++ + +
Sbjct: 216 MWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILG 275
Query: 254 PPLRSLFPS---------ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
R + + S +ALDLL K+ YD + R+TA++A+EH YF
Sbjct: 276 QHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + ++ + K RE+K+L+ L+ +II+LID
Sbjct: 51 LGRGKYSEVFEAINITNNE-----RVVVKILKPVKKKKIKREVKILENLRGGTNIIKLID 105
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE++ TD + + + L+ DI+ YM LK L +CH K ++HR
Sbjct: 106 TVKDPVSKTPALVFEYINNTDFKQLYQ----ILTDFDIRFYMYELLKALDYCHSKGIMHR 161
Query: 136 DMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP+N++I H Q L+L D+GLA F P + + +V +R+++ PELL + Y +
Sbjct: 162 DVKPHNVMI-DHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSL 219
Query: 194 DVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
D+W+ GC+ A ++ RR PF G + DQL +I GT + ++ + +
Sbjct: 220 DMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDIL 279
Query: 253 APPLRSLFPS---------ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
R + + S +ALDLL K+ YD + R+TA++A+EH YF
Sbjct: 280 GQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 153/301 (50%), Gaps = 41/301 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
P LVFE + +R T L+ DI+ YM LK L +CH ++HRD
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLRQT---LTDYDIRFYMYEILKALDYCHSMGIMHRD 156
Query: 137 MKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDM 215
Query: 196 WAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVAA 253
W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 216 WSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIELD 266
Query: 254 PPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
P + S +ALD L K+ YD ++R+TA++A+EH YF +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 297 A 297
Sbjct: 327 V 327
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 34/286 (11%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
A+RY +LG+G++G V K D T Q A+K I K T LRE++LLK+L
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 71 PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L + + ++V E + +I+ S D ++ G+ + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 129 KKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
K ++HRD+KP N+L+ S + +K+ DFGL+ F + + ++ +Y APE+L G
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG 197
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
Y DVW+AG I LL+ P G ++ D L ++ QW
Sbjct: 198 T--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--------- 246
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
+ SDDA DL+ KM T+ P RITA Q LEH
Sbjct: 247 ---------------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 34/286 (11%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
A+RY +LG+G++G V K D T Q A+K I K T LRE++LLK+L
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 71 PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L + + ++V E + +I+ S D ++ G+ + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 129 KKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
K ++HRD+KP N+L+ S + +K+ DFGL+ F + + ++ +Y APE+L G
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG 197
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
Y DVW+AG I LL+ P G ++ D L ++ QW
Sbjct: 198 T--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--------- 246
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
+ SDDA DL+ KM T+ P RITA Q LEH
Sbjct: 247 ---------------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 161/344 (46%), Gaps = 59/344 (17%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
VA RY +V+G+G++G V KA D K Q VA+K +R K+ + A EI++L+ L+
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLR 151
Query: 70 ------SPHIIELIDAFPHKGNLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQMTLK 122
+ ++I +++ F + ++ + FE + +L E + +N S ++ + L+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
L HK ++H D+KP N+L+ G+ +K+ DFG + +R + +R+YRAP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAP 268
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ----- 235
E++ GA+ YG +D+W+ GCI AELL P L G + DQL + G PSQ
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG--MPSQKLLDA 325
Query: 236 ---WPDLAYLPDYVEYQYVA--------------------APPLRSLFPSA---SDDA-- 267
+ Y Y V PP + +A DD
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385
Query: 268 LDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT 311
LD L + +DP R+T QAL H P +LP+P T
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRH--------PWLRRRLPKPPT 421
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 43 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 97
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 98 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 153
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 154 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 212
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 213 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 263
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323
Query: 296 SA 297
+
Sbjct: 324 TV 325
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 98
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 99 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 154
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 155 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 213
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 214 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 264
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
Query: 296 SA 297
+
Sbjct: 325 TV 326
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 98
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 99 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 154
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 155 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 213
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 214 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 264
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
Query: 296 SA 297
+
Sbjct: 325 TV 326
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
+
Sbjct: 326 TV 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 50 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 104
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 105 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 160
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 161 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 219
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 220 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 270
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 271 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 330
Query: 296 SA 297
+
Sbjct: 331 TV 332
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 154/299 (51%), Gaps = 43/299 (14%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
LG G Y V++AI+ + V +K ++ K+K REIK+L+ L+ P+II L D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79 AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
P LVFE + TD + + + L+ DI+ YM LK L +CH ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
D+KP+N++I H +L+L D+GLA F P + + +V +R+++ PELL + Y +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
+W+ GC+ A ++ R+ PF G + DQL +I GT L DY++ Y
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
P + S +ALD L K+ YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 55/342 (16%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
VA RY +V+G+G +G V KA D K Q VA+K +R K+ + A EI++L+ L+
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLR 151
Query: 70 ------SPHIIELIDAFPHKGNLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQMTLK 122
+ ++I +++ F + ++ + FE + +L E + +N S ++ + L+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
L HK ++H D+KP N+L+ G+ +K+ DFG + +R + +R+YRAP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQSRFYRAP 268
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA------TPS 234
E++ GA+ YG +D+W+ GCI AELL P L G + DQL + G
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASK 327
Query: 235 QWPDLAYLPDYVEYQYVA--------------------APPLRSLFPSA---SDDA--LD 269
+ + Y Y V PP + +A DD LD
Sbjct: 328 RAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLD 387
Query: 270 LLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT 311
L + +DP R+T QAL H P +LP+P T
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRH--------PWLRRRLPKPPT 421
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 154/324 (47%), Gaps = 51/324 (15%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
VA RY +V+G+G++G V KA D K Q VA+K +R K+ + A EI++L+ L+
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLR 151
Query: 70 ------SPHIIELIDAFPHKGNLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQMTLK 122
+ ++I +++ F + ++ + FE + +L E + +N S ++ + L+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
L HK ++H D+KP N+L+ G+ +K+ DFG + +R + +R+YRAP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAP 268
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ----- 235
E++ GA+ YG +D+W+ GCI AELL P L G + DQL + G PSQ
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG--MPSQKLLDA 325
Query: 236 ---WPDLAYLPDYVEYQYVA--------------------APPLRSLFPSA---SDDA-- 267
+ Y Y V PP + +A DD
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385
Query: 268 LDLLSKMFTYDPKARITAQQALEH 291
LD L + +DP R+T QAL H
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRH 409
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 148/324 (45%), Gaps = 43/324 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTAL-REIKLLKEL 68
D Y EV+G+G + VV + I+ +TGQ A+K + + K G++ L RE + L
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFME-TDL--ETVIR-NTNIFLSPADIKSYMQMTLKGL 124
K PHI+EL++ + G L++VFEFM+ DL E V R + S A YM+ L+ L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+CH ++HRD+KP+ +L+ S +KL FG+A G +V + APE
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
++ + YG VDVW G I LL+ G+ + G I + P QW +
Sbjct: 206 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY-KMNPRQWSHI-- 261
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH-------RYF 294
S+ A DL+ +M DP RIT +AL H RY
Sbjct: 262 ----------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 299
Query: 295 SSAPLPTEPNKLPRPATKRASKAS 318
LP +L + +R K +
Sbjct: 300 YKIHLPETVEQLRKFNARRKLKGA 323
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 131/249 (52%), Gaps = 33/249 (13%)
Query: 70 SPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +C
Sbjct: 106 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYC 162
Query: 128 HKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
H + ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL
Sbjct: 163 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 221
Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
+ Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + AYL
Sbjct: 222 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----AYLN-- 274
Query: 246 VEYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQA 288
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A
Sbjct: 275 -KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 333
Query: 289 LEHRYFSSA 297
+ H YF
Sbjct: 334 MTHPYFQQV 342
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 148/324 (45%), Gaps = 43/324 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTAL-REIKLLKEL 68
D Y EV+G+G + VV + I+ +TGQ A+K + + K G++ L RE + L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFME-TDL--ETVIR-NTNIFLSPADIKSYMQMTLKGL 124
K PHI+EL++ + G L++VFEFM+ DL E V R + S A YM+ L+ L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+CH ++HRD+KP+ +L+ S +KL FG+A G +V + APE
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
++ + YG VDVW G I LL+ G+ + G I + P QW +
Sbjct: 204 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY-KMNPRQWSHI-- 259
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH-------RYF 294
S+ A DL+ +M DP RIT +AL H RY
Sbjct: 260 ----------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 297
Query: 295 SSAPLPTEPNKLPRPATKRASKAS 318
LP +L + +R K +
Sbjct: 298 YKIHLPETVEQLRKFNARRKLKGA 321
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG------KQKEGVNFTALR 60
+K+ +Y ++V+G G VV + + TG A+K + + +Q E V R
Sbjct: 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 61 EIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM 119
E +L+++ PHII LID++ + LVF+ M + LS + +S M+
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
L+ ++F H ++HRD+KP N+L+ + Q++L+DFG + P + Y A
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRELCGTPGYLA 267
Query: 180 PELLFGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
PE+L + YG VD+WA G I LL P I L I +
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+W D S DL+S++ DP+AR+TA+QAL+H +F
Sbjct: 328 EWDD------------------------RSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 131/251 (52%), Gaps = 33/251 (13%)
Query: 68 LKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
+ P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L
Sbjct: 83 MGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALD 139
Query: 126 FCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
+CH + ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 198
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN 253
Query: 244 DYVEYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQ 286
+Y+ P L +L F +A + +A+D L K+ YD + R+TA
Sbjct: 254 ---KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 287 QALEHRYFSSA 297
+A+ H YF
Sbjct: 311 EAMTHPYFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71 PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 143
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
+ ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 254
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A+
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 290 EHRYFSSA 297
H YF
Sbjct: 315 THPYFQQV 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 130/249 (52%), Gaps = 33/249 (13%)
Query: 70 SPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +C
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYC 141
Query: 128 HKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
H + ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
+ Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN-- 253
Query: 246 VEYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQA 288
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A
Sbjct: 254 -KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 289 LEHRYFSSA 297
+ H YF
Sbjct: 313 MTHPYFQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71 PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
+ ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
H YF
Sbjct: 314 THPYFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71 PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 143
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
+ ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 254
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A+
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 290 EHRYFSSA 297
H YF
Sbjct: 315 THPYFQQV 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71 PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
+ ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
H YF
Sbjct: 314 THPYFQQV 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 130/249 (52%), Gaps = 33/249 (13%)
Query: 70 SPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +C
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYC 141
Query: 128 HKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
H + ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
+ Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN-- 253
Query: 246 VEYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQA 288
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A
Sbjct: 254 -KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 289 LEHRYFSSA 297
+ H YF
Sbjct: 313 MTHPYFQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71 PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +CH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 144
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
+ ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 255
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A+
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 290 EHRYFSSA 297
H YF
Sbjct: 316 THPYFQQV 323
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71 PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P+I++L+D H L+FE++ V+ T L+ DI+ Y+ LK L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
+ ++HRD+KP+N++I +L+L D+GLA F P + + +V +R+++ PELL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
Y +D+W+ GC+FA ++ R+ PF G + DQL KI GT + YL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
+Y+ P L +L F +A + +A+D L K+ YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
H YF
Sbjct: 314 THPYFQQV 321
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-----------GKQKEGVNFT 57
K+ + Y K LG G YG V + AIK I+ K E +
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 58 ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSY 116
EI LLK L P+II+L D F K +LV EF E +L I N + F D +
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANI 151
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL---KLADFGLARIFGSPDRRFTHQVF 173
M+ L G+ + HK ++HRD+KP N+L+ + L K+ DFGL+ F S D + ++
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SKDYKLRDRLG 210
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
+Y APE+L K+Y DVW+ G I LL P G +D D + K+
Sbjct: 211 TAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG------ 262
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
Y D+ +++ + SD+A +L+ M TYD R TA++AL R+
Sbjct: 263 ------KYYFDFNDWKNI------------SDEAKELIKLMLTYDYNKRCTAEEALNSRW 304
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 37/289 (12%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKEL 68
++DRY + + LG G YG V D TG AIK I+ N AL E+ +LK+L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
P+I++L + F K N +LV E E E ++R S D M+ L G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTT 135
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
+ HK ++HRD+KP NLL+ S + +K+ DFGL+ F + ++ +Y APE+
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEV 194
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
L K+Y DVW+ G I LL P G +D + L ++ + P W +
Sbjct: 195 L--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV--- 249
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
SD+A L+ M TY+P RI+A++AL H
Sbjct: 250 ---------------------SDEAKQLVKLMLTYEPSKRISAEEALNH 277
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+++ Y + + LG G YG V D T AIK IR N L E+ +LK L
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+I++L D F K N +LV E + + +I + D ++ L G+ +
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYL 152
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
HK ++HRD+KP NLL+ S + +K+ DFGL+ +F + ++ ++ +Y APE+L
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYIAPEVL- 210
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
K+Y DVW+ G I LL P G +D + L K+ T +W ++
Sbjct: 211 -RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV----- 264
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
S+ A DL+ +M +D + RI+AQQALEH
Sbjct: 265 -------------------SEGAKDLIKQMLQFDSQRRISAQQALEH 292
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKEL 68
++DRY + + LG G YG V D TG AIK I+ N AL E+ +LK+L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
P+I++L + F K N +LV E E E ++R S D M+ L G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTT 118
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
+ HK ++HRD+KP NLL+ S + +K+ DFGL+ F + ++ +Y APE+
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEV 177
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
L K+Y DVW+ G I LL P G +D + L ++ + P W
Sbjct: 178 L--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW------ 229
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
SD+A L+ M TY+P RI+A++AL H
Sbjct: 230 ------------------TQVSDEAKQLVKLMLTYEPSKRISAEEALNH 260
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 31/298 (10%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
+ E L+K+ + + E LGEG+YG VYKAI +TGQ VAIK++ + + + ++
Sbjct: 18 LDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IK 73
Query: 61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM 119
EI ++++ SPH+++ ++ +L +V E+ + +IR N L+ +I + +Q
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
TLKGL + H +HRD+K N+L+ + G KLADFG+A + + ++ A
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMA 193
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
PE++ Y D+W+ G E+ +P +DI + IF P+ P
Sbjct: 194 PEVI-QEIGYNCVADIWSLGITAIEMAEGKP---PYADIHPMRAIFM-----IPTNPPPT 244
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
P+ SD+ D + + P+ R TA Q L+H + SA
Sbjct: 245 FRKPEL-----------------WSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 154/336 (45%), Gaps = 58/336 (17%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
+K DRY ++G+G++G V KA D + VAIK I K K+ A E++LL E
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLL-E 86
Query: 68 LKSPH-------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQM 119
L + H I+ L F + +L LVFE + +L ++RNTN +S + + Q
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 120 TLKGLAFCH--KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFAR 175
L F + ++H D+KP N+L+ + +K+ DFG + G +R + +R
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSR 203
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
+YR+PE+L G Y +D+W+ GCI E+ P G++++DQ+ KI G P+
Sbjct: 204 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-PAH 261
Query: 236 WPDLA--------YLPDYV-----------EYQYVAAPPLRSLFPSASD----------- 265
D A LPD EY+ L ++ +
Sbjct: 262 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 321
Query: 266 ----DAL---DLLSKMFTYDPKARITAQQALEHRYF 294
D L DL+ +M YDPK RI AL+H +F
Sbjct: 322 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 357
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 53/302 (17%)
Query: 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKL 64
+SK+ Y+ RE LGEG++G V A KT Q VA+K I R +K ++ REI
Sbjct: 3 ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 65 LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
LK L+ PHII+L D ++ +V E+ +L I ++ + + + Q + +
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAI 121
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFA 174
+CH+ ++HRD+KP NLL+ + +K+ADFGL+ I GSP+
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN--------- 172
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE++ G G VDVW+ G + + L+ R PF D + + +F +
Sbjct: 173 --YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-----DDEFIPNLFKKVNSC-- 223
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
+ +PD++ S A L+ +M DP RIT Q+ +
Sbjct: 224 -----VYVMPDFL-----------------SPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
Query: 294 FS 295
F+
Sbjct: 262 FN 263
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 154/336 (45%), Gaps = 58/336 (17%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
+K DRY ++G+G++G V KA D + VAIK I K K+ A E++LL E
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLL-E 105
Query: 68 LKSPH-------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQM 119
L + H I+ L F + +L LVFE + +L ++RNTN +S + + Q
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 120 TLKGLAFCH--KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFAR 175
L F + ++H D+KP N+L+ + +K+ DFG + G +R + +R
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSR 222
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
+YR+PE+L G Y +D+W+ GCI E+ P G++++DQ+ KI G P+
Sbjct: 223 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-PAH 280
Query: 236 WPDLA--------YLPDYV-----------EYQYVAAPPLRSLFPSASD----------- 265
D A LPD EY+ L ++ +
Sbjct: 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 340
Query: 266 ----DAL---DLLSKMFTYDPKARITAQQALEHRYF 294
D L DL+ +M YDPK RI AL+H +F
Sbjct: 341 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 154/336 (45%), Gaps = 58/336 (17%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
+K DRY ++G+G++G V KA D + VAIK I K K+ A E++LL E
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLL-E 105
Query: 68 LKSPH-------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQM 119
L + H I+ L F + +L LVFE + +L ++RNTN +S + + Q
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 120 TLKGLAFCH--KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFAR 175
L F + ++H D+KP N+L+ + +K+ DFG + G +R + +R
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLG---QRIYQXIQSR 222
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
+YR+PE+L G Y +D+W+ GCI E+ P G++++DQ+ KI G P+
Sbjct: 223 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-PAH 280
Query: 236 WPDLA--------YLPDYV-----------EYQYVAAPPLRSLFPSASD----------- 265
D A LPD EY+ L ++ +
Sbjct: 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 340
Query: 266 ----DAL---DLLSKMFTYDPKARITAQQALEHRYF 294
D L DL+ +M YDPK RI AL+H +F
Sbjct: 341 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LGEG++G V A T TGQ VA+K I + K + REI L+ L+ PHII+L D
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
K + +V E+ +L I + +S + + + Q + + +CH+ ++HRD+K
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 140
Query: 139 PNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGAKQ 188
P NLL+ H +K+ADFGL+ I GSP+ Y APE++ G
Sbjct: 141 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGKLY 189
Query: 189 YGAGVDVWAAGCIFAELLNRR-PF 211
G VDVW+ G I +L RR PF
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LGEG++G V A T TGQ VA+K I + K + REI L+ L+ PHII+L D
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
K + +V E+ +L I + +S + + + Q + + +CH+ ++HRD+K
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 130
Query: 139 PNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGAKQ 188
P NLL+ H +K+ADFGL+ I GSP+ Y APE++ G
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGKLY 179
Query: 189 YGAGVDVWAAGCIFAELLNRR-PF 211
G VDVW+ G I +L RR PF
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
+Y + E +G+G G VY A+D TGQ VAI+++ L +Q KE + + EI +++E K+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 76
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ +D++ L +V E++ L V+ T + I + + L+ L F H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 134
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HRD+K +N+L+G G +KL DFG + + V ++ APE++ K Y
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV-TRKAY 193
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
G VD+W+ G + E++ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 24/206 (11%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
+ LGEG++G V A T TGQ VA+K I + K + REI L+ L+ PHII+L
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
D K + +V E+ +L I + +S + + + Q + + +CH+ ++HRD
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRD 137
Query: 137 MKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGA 186
+KP NLL+ H +K+ADFGL+ I GSP+ Y APE++ G
Sbjct: 138 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGK 186
Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PF 211
G VDVW+ G I +L RR PF
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LGEG++G V A T TGQ VA+K I + K + REI L+ L+ PHII+L D
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
K + +V E+ +L I + +S + + + Q + + +CH+ ++HRD+K
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 134
Query: 139 PNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGAKQ 188
P NLL+ H +K+ADFGL+ I GSP+ Y APE++ G
Sbjct: 135 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGKLY 183
Query: 189 YGAGVDVWAAGCIFAELLNRR-PF 211
G VDVW+ G I +L RR PF
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
+Y + E +G+G G VY A+D TGQ VAI+++ L +Q KE + + EI +++E K+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 76
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ +D++ L +V E++ L V+ T + I + + L+ L F H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 134
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HRD+K +N+L+G G +KL DFG + + V ++ APE++ K Y
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-TRKAY 193
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
G VD+W+ G + E++ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
+Y + E +G+G G VY A+D TGQ VAI+++ L +Q KE + + EI +++E K+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 77
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ +D++ L +V E++ L V+ T + I + + L+ L F H
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 135
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HRD+K +N+L+G G +KL DFG + + V ++ APE++ K Y
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-TRKAY 194
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
G VD+W+ G + E++ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
+Y + E +G+G G VY A+D TGQ VAI+++ L +Q KE + + EI +++E K+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 76
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ +D++ L +V E++ L V+ T + I + + L+ L F H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 134
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HRD+K +N+L+G G +KL DFG + + V ++ APE++ K Y
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKAY 193
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
G VD+W+ G + E++ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 149/344 (43%), Gaps = 51/344 (14%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
K + D Y+ + LG G G V A + KT + VAIK K +G +E E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
I++LK+L P II++ + F + + ++V E ME + V+ N L A K Y
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 122
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
L + + H+ ++HRD+KP N+L+ S + +K+ DFG ++I G T
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G Y VD W+ G I F L PF + + + +I + P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
W ++ S+ ALDL+ K+ DPKAR T ++AL H +
Sbjct: 242 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 294 FSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRR 337
+ + L + +K P VL+ P +R+
Sbjct: 278 LQDEDMKRKFQDLLSEENESTAK---------PQVLAQPSTSRK 312
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
+Y + E +G+G G VY A+D TGQ VAI+++ L +Q KE + + EI +++E K+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 77
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ +D++ L +V E++ L V+ T + I + + L+ L F H
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 135
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
V+HR++K +N+L+G G +KL DFG + + V ++ APE++ K Y
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKAY 194
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
G VD+W+ G + E++ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEP 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
K + D Y+ + LG G G V A + KT + VAIK K +G +E E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
I++LK+L P II++ + F + + ++V E ME + V+ N L A K Y
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 121
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
L + + H+ ++HRD+KP N+L+ S + +K+ DFG ++I G T
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 180
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G Y VD W+ G I F L PF + + + +I + P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 240
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
W ++ S+ ALDL+ K+ DPKAR T ++AL H +
Sbjct: 241 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 276
Query: 294 F 294
Sbjct: 277 L 277
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
K + D Y+ + LG G G V A + KT + VAIK K +G +E E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
I++LK+L P II++ + F + + ++V E ME + V+ N L A K Y
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 122
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
L + + H+ ++HRD+KP N+L+ S + +K+ DFG ++I G T
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G Y VD W+ G I F L PF + + + +I + P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
W ++ S+ ALDL+ K+ DPKAR T ++AL H +
Sbjct: 242 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 294 F 294
Sbjct: 278 L 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
K + D Y+ + LG G G V A + KT + VAIK K +G +E E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
I++LK+L P II++ + F + + ++V E ME + V+ N L A K Y
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 122
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
L + + H+ ++HRD+KP N+L+ S + +K+ DFG ++I G T
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G Y VD W+ G I F L PF + + + +I + P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
W ++ S+ ALDL+ K+ DPKAR T ++AL H +
Sbjct: 242 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 294 F 294
Sbjct: 278 L 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
K + D Y+ + LG G G V A + KT + VAIK K +G +E E
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
I++LK+L P II++ + F + + ++V E ME + V+ N L A K Y
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 128
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
L + + H+ ++HRD+KP N+L+ S + +K+ DFG ++I G T
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 187
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G Y VD W+ G I F L PF + + + +I + P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 247
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
W ++ S+ ALDL+ K+ DPKAR T ++AL H +
Sbjct: 248 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 283
Query: 294 F 294
Sbjct: 284 L 284
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 134/298 (44%), Gaps = 42/298 (14%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
K + D Y+ + LG G G V A + KT + VAI+ K +G +E E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
I++LK+L P II++ + F + + ++V E ME + V+ N L A K Y
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 247
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
L + + H+ ++HRD+KP N+L+ S + +K+ DFG ++I G T
Sbjct: 248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 306
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G Y VD W+ G I F L PF + + + +I + P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
W ++ S+ ALDL+ K+ DPKAR T ++AL H
Sbjct: 367 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRH 400
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 41/296 (13%)
Query: 4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REI 62
++ S K +D Y +E LG+G + VV + + TG A K I K+ +F L RE
Sbjct: 21 MNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREA 79
Query: 63 KLLKELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQM 119
++ ++L+ P+I+ L D+ + +LVF+ + E + V R F S AD +Q
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQ 136
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR- 175
L+ +A+CH ++HR++KP NLL+ S + +KLADFGLA D H
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 194
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
Y +PE+L Y VD+WA G I + L+ PF D DQ +++A
Sbjct: 195 GYLSPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA-- 246
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
Y Y +P ++ P A L+ M T +PK RITA QAL+
Sbjct: 247 -------------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 284
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 102 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 158
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 215
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 255
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 256 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 128/295 (43%), Gaps = 56/295 (18%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPH 72
Y+ + LG GT+G V TG VA+K + K + V REI+ LK + PH
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
II+L ++ +V E++ + + +N L + + Q L G+ +CH+
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRH 135
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAP 180
V+HRD+KP N+L+ +H K+ADFGL+ + GSP+ Y AP
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN-----------YAAP 184
Query: 181 ELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
E++ G G VD+W++G I +A L PF D D + +F +
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPF-----DDDHVPTLFKKICDG-------I 232
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
Y P Y L PS + LL M DP R T + EH +F
Sbjct: 233 FYTPQY-------------LNPS----VISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 134/298 (44%), Gaps = 42/298 (14%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
K + D Y+ + LG G G V A + KT + VAI+ K +G +E E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
I++LK+L P II++ + F + + ++V E ME + V+ N L A K Y
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 261
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
L + + H+ ++HRD+KP N+L+ S + +K+ DFG ++I G T
Sbjct: 262 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 320
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G Y VD W+ G I F L PF + + + +I + P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 380
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
W ++ S+ ALDL+ K+ DPKAR T ++AL H
Sbjct: 381 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRH 414
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 36/293 (12%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+ D Y E LG+G + VV + + TGQ A K I K + RE ++ + LK
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 70 SPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
P+I+ L D+ +G +LVF+ + E + V R + S AD +Q L+ +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILESVNH 118
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
CH ++HRD+KP NLL+ S + +KLADFGLA + + Y +PE+L
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
YG VD+WA G I + L+ PF D +L + A PS
Sbjct: 179 -RKDPYGKPVDMWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFPS-------- 227
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P ++ P A DL++KM T +P RITA +AL+H +
Sbjct: 228 -----------PEWDTVTPEAK----DLINKMLTINPAKRITASEALKHPWIC 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLL 65
S K +D Y +E LG+G + VV + + TG A K I K+ +F L RE ++
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-TKKLSARDFQKLEREARIC 59
Query: 66 KELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLK 122
++L+ P+I+ L D+ + +LVF+ + E + V R F S AD +Q L+
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILE 116
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR-WYR 178
+A+CH ++HR++KP NLL+ S + +KLADFGLA D H Y
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 179 APELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
+PE+L Y VD+WA G I + L+ PF D DQ +++A
Sbjct: 175 SPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA----- 223
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
Y Y +P ++ P A L+ M T +PK RITA QAL+
Sbjct: 224 ----------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 93 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 149
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 150 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 206
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 207 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 246
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 247 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 279
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 36/293 (12%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+ D Y E LG+G + VV + + TGQ A K I K + RE ++ + LK
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 70 SPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
P+I+ L D+ +G +LVF+ + E + V R + S AD +Q L+ +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILESVNH 118
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
CH ++HRD+KP NLL+ S + +KLADFGLA + + Y +PE+L
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
YG VD+WA G I + L+ PF D +L + A PS
Sbjct: 179 -RKDPYGKPVDMWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFPS-------- 227
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P ++ P A DL++KM T +P RITA +AL+H +
Sbjct: 228 -----------PEWDTVTPEAK----DLINKMLTINPAKRITASEALKHPWIC 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLL 65
S K +D Y +E LG+G + VV + + TG A K I K+ +F L RE ++
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARIC 59
Query: 66 KELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLK 122
++L+ P+I+ L D+ + +LVF+ + E + V R F S AD +Q L+
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILE 116
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR-WYR 178
+A+CH ++HR++KP NLL+ S + +KLADFGLA D H Y
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 179 APELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
+PE+L Y VD+WA G I + L+ PF D DQ +++A
Sbjct: 175 SPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA----- 223
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
Y Y +P ++ P A L+ M T +PK RITA QAL+
Sbjct: 224 ----------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 79 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 77 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 190
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 230
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 231 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 36/285 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
E LG+G + VV + + GQ A K I K + RE ++ + LK P+I+ L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 78 DAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
D+ +G+ +L+F+ + E + V R + S AD +Q L+ + CH+ V+H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 135 RDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
RD+KP NLL+ S +KLADFGLA + + Y +PE+L YG
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL-RKDPYGK 203
Query: 192 GVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
VD+WA G I + L+ PF D +L + A PS
Sbjct: 204 PVDLWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFPS---------------- 245
Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P ++ P A DL++KM T +P RITA +AL+H + S
Sbjct: 246 ---PEWDTVTPEAK----DLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 81 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 194
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 234
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 235 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 81 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 194
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 234
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 235 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 75 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 131
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 132 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 188
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 189 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 228
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 229 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 102 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 158
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDL 215
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 255
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 256 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 41/291 (14%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKE 67
K +D Y +E LG+G + VV + + TG A K I K+ +F L RE ++ ++
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRK 60
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
L+ P+I+ L D+ + +LVF+ + E + V R F S AD +Q L+ +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESI 117
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR-WYRAP 180
A+CH ++HR++KP NLL+ S + +KLADFGLA D H Y +P
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 175
Query: 181 ELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
E+L Y VD+WA G I + L+ PF D DQ +++A
Sbjct: 176 EVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA------- 222
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
Y Y +P ++ P A L+ M T +PK RITA QAL+
Sbjct: 223 --------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 260
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 39/311 (12%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
K E+LG G +G V+K +T TG +A K K R K KE V EI ++ +L ++
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK----NEISVMNQLDHANL 148
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I+L DAF K ++ LV E+++ +L I + + L+ D +M+ +G+ H+ ++
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208
Query: 133 LHRDMKPNNLLIGSHG--QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
LH D+KP N+L + Q+K+ DFGLAR + P + + APE++
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREKLKVNFGTPEFLAPEVV-NYDFVS 266
Query: 191 AGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
D+W+ G I LL+ PFL G +D + L I A +W L D
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILAC-------RWD----LED----- 309
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
F S++A + +SK+ + RI+A +AL+H + S L + + +
Sbjct: 310 --------EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLS--AQK 359
Query: 310 ATKRASKASDF 320
R S A DF
Sbjct: 360 KKNRGSDAQDF 370
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 34/313 (10%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V D Y E LG G +GVV++ + TG A K + + + T +EI+ + L+
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR 212
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P ++ L DAF + +++EFM +L + + + +S + YM+ KGL H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 129 KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
+ +H D+KP N++ + +LKL DFGL P + + APE+ G
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEG- 330
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
K G D+W+ G + LL+ G +D + L + + W + D
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DWN----MDD-- 377
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKL 306
S F S+D D + K+ DP R+T QALEH + + P +++
Sbjct: 378 -----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 426
Query: 307 PRPATKRASKASD 319
P + R +K D
Sbjct: 427 P---SSRYTKIRD 436
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 34/313 (10%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V D Y E LG G +GVV++ + TG A K + + + T +EI+ + L+
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR 106
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P ++ L DAF + +++EFM +L + + + +S + YM+ KGL H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 129 KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
+ +H D+KP N++ + +LKL DFGL P + + APE+ G
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEG- 224
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
K G D+W+ G + LL+ G +D + L + + W + D
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DWN----MDD-- 271
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKL 306
S F S+D D + K+ DP R+T QALEH + + P +++
Sbjct: 272 -----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 320
Query: 307 PRPATKRASKASD 319
P + R +K D
Sbjct: 321 P---SSRYTKIRD 330
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 80 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 137 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 193
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 194 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 233
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 234 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 266
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 79 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 77 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEG-RMHDEKVDL 190
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 230
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 231 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + + +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDSTRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKKVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ D +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +G G++G V A+ T A KKI ++ F +EI+++K L P+I
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLDHPNI 68
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + F +++LV E +L + + +F +D M+ L +A+CHK V
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVF-RESDAARIMKDVLSAVAYCHKLNV 127
Query: 133 LHRDMKPNNLLI---GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
HRD+KP N L LKL DFGLA F P + +V +Y +P++L G Y
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMRTKVGTPYYVSPQVLEGL--Y 184
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
G D W+AG + LL P +D + + KI T W ++
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV---------- 234
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF----SSAP 298
S A L+ ++ T PK RIT+ QALEH +F SS+P
Sbjct: 235 --------------SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTAL 59
+AE+ K D + LG+G +G VY A + + +A+K + + +KEGV
Sbjct: 4 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 63
Query: 60 REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQ 118
REI++ L+ P+I+ + + F + ++L+ EF +L ++ F ++M+
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFME 122
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L +CH++ V+HRD+KP NLL+G G+LK+ADFG + +P R Y
Sbjct: 123 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYL 180
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
PE++ G K + VD+W AG + E L P S + +I D
Sbjct: 181 PPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV----------D 229
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
L + PP SD + DL+SK+ Y P R+ + +EH
Sbjct: 230 LKF------------PPF------LSDGSKDLISKLLRYHPPQRLPLKGVMEH 264
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 81 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE + G + + VD+
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEG-RXHDEKVDL 194
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 234
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 235 --------TEGARDLISRLLKHNPSQRPXLREVLEHPWITA 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTAL 59
+AE+ K D + LG+G +G VY A + + +A+K + + +KEGV
Sbjct: 3 LAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 60 REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQ 118
REI++ L+ P+I+ + + F + ++L+ EF +L ++ F ++M+
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFME 121
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L +CH++ V+HRD+KP NLL+G G+LK+ADFG + +P R Y
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYL 179
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
PE++ G K + VD+W AG + E L P S + +I D
Sbjct: 180 PPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV----------D 228
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
L + PP SD + DL+SK+ Y P R+ + +EH
Sbjct: 229 LKF------------PPF------LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 78 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 134
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+A+FG + +P R T Y PE++ G + + VD+
Sbjct: 135 DIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 191
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 231
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 232 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
Y +G G++G V A+ T A KKI ++ F +EI+++K L P+I
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLDHPNI 85
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + F +++LV E +L + + +F +D M+ L +A+CHK V
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVF-RESDAARIMKDVLSAVAYCHKLNV 144
Query: 133 LHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
HRD+KP N L + LKL DFGLA F P + +V +Y +P++L G Y
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMRTKVGTPYYVSPQVLEGL--Y 201
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
G D W+AG + LL P +D + + KI T W ++
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV---------- 251
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF----SSAP 298
S A L+ ++ T PK RIT+ QALEH +F SS+P
Sbjct: 252 --------------SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 290
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTAL 59
+AE+ K D + LG+G +G VY A + + +A+K + + +KEGV
Sbjct: 3 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 60 REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQ 118
REI++ L+ P+I+ + + F + ++L+ EF +L ++ F ++M+
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFME 121
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
L +CH++ V+HRD+KP NLL+G G+LK+ADFG + +P R Y
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYL 179
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
PE++ G K + VD+W AG + E L P S + +I D
Sbjct: 180 PPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV----------D 228
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
L + PP SD + DL+SK+ Y P R+ + +EH
Sbjct: 229 LKF------------PPF------LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+LG+G++ VY+A TG VAIK I + K G+ E+K+ +LK P I+EL
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
+ F ++LV E ++ ++N S + + +M + G+ + H +LHRD
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRD 137
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
+ +NLL+ + +K+ADFGLA P + Y +PE+ +G DVW
Sbjct: 138 LTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA-TRSAHGLESDVW 196
Query: 197 AAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256
+ GC+F LL RP F T T + L DY P
Sbjct: 197 SLGCMFYTLLIGRP----------------PFDTDTVKNTLNKVVLADY------EMPSF 234
Query: 257 RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
S+ +A DL+ ++ +P R++ L+H + S
Sbjct: 235 LSI------EAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 78 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 134
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 135 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDL 191
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 231
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 232 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 79 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+A+FG + +P R T Y PE++ G + + VD+
Sbjct: 136 DIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 79 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + + +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 73 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 129
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 130 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 186
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 226
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 227 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 77 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDL 190
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 230
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 231 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 79 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 76 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 138/302 (45%), Gaps = 37/302 (12%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
MA + ++ + Y E LG+G + VV + + GQ A I K + R
Sbjct: 1 MATITCTR-FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER 59
Query: 61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYM 117
E ++ + LK P+I+ L D+ +G+ +L+F+ + E + V R + S AD +
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCI 116
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFA 174
Q L+ + CH+ V+HR++KP NLL+ S +KLADFGLA + +
Sbjct: 117 QQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 176
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y +PE+L YG VD+WA G I + L+ PF D +L + A P
Sbjct: 177 PGYLSPEVL-RKDPYGKPVDLWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFP 233
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
S P ++ P A DL++KM T +P RITA +AL+H +
Sbjct: 234 S-------------------PEWDTVTPEAK----DLINKMLTINPSKRITAAEALKHPW 270
Query: 294 FS 295
S
Sbjct: 271 IS 272
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 38/276 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 80 YFHDATRVYLILEY--APLGTVYRELQK-LSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS+G+LK+ADFG + +P R T Y PE++ G + + VD+
Sbjct: 137 DIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 193
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L P + + + +I T PD+V
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-----------FPDFV--------- 233
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
++ A DL+S++ ++ R+T + LEH
Sbjct: 234 --------TEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 79 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L +P + ++ + +I T PD+V
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
++Y++ + +GEG++G T+ G+ IK+I + + + RE+ +L +K P
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 72 HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCH 128
+I++ ++F G+L++V ++ E DL I L D + ++Q+ L L H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL-ALKHVH 142
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
+ +LHRD+K N+ + G ++L DFG+AR+ S + +Y +PE+ K
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC-ENKP 201
Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
Y D+WA GC+ EL + + S + + KI + ++ P + Y
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG------------SFPPVSLHY 249
Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
Y D L+S++F +P+ R + LE + +
Sbjct: 250 SY---------------DLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 34/279 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79 AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
F ++L+ E+ ++ ++ + F +Y+ L++CH K V+HRD+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
KP NLL+GS G+LK+ADFG + +P R T Y PE++ G + + VD+W+
Sbjct: 140 KPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWS 196
Query: 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257
G + E L +P + ++ + +I T PD+V
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV----------- 234
Query: 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 235 ------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 40/297 (13%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
+ D ++ + LG G +G V+ + +G IK I K + V + EI++LK L
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTI--NKDRSQVPMEQIEAEIEVLKSL 77
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFMETD--LETVI--RNTNIFLSPADIKSYMQMTLKGL 124
P+II++ + F N+++V E E LE ++ + LS + M+ + L
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
A+ H + V+H+D+KP N+L H +K+ DFGLA +F S D T+ Y APE
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEHSTNAAGTALYMAPE 196
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
+ + D+W+AG + LL PF T + ++
Sbjct: 197 VF--KRDVTFKCDIWSAGVVMYFLLTGCLPF--------------------TGTSLEEVQ 234
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
Y E Y A R L P A +DLL +M T DP+ R +A Q L H +F A
Sbjct: 235 QKATYKEPNY--AVECRPLTPQA----VDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 49/308 (15%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELK 69
+D Y+ +E +G G+Y + + T A+K I K+ EI+ LL+ +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQ 79
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+II L D + +++LV E M L+ ++R F S + + K + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYL 137
Query: 128 HKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
H + V+HRD+KP+N+L G+ L++ DFG A+ + + + + APE+L
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQ--LGKIFAAFGTATPSQWPDLA 240
+ Y G D+W+ G + +L PF G SD + L +I + T + W
Sbjct: 198 -KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN--- 253
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
+ S+ A DL+SKM DP R+TA+Q L+H P
Sbjct: 254 ---------------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQH------PWV 286
Query: 301 TEPNKLPR 308
T+ +KLP+
Sbjct: 287 TQKDKLPQ 294
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 49/308 (15%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELK 69
+D Y+ +E +G G+Y + + T A+K I K+ EI+ LL+ +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQ 79
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P+II L D + +++LV E M L+ ++R F S + + K + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYL 137
Query: 128 HKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
H + V+HRD+KP+N+L G+ L++ DFG A+ + + + + APE+L
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQ--LGKIFAAFGTATPSQWPDLA 240
+ Y G D+W+ G + +L PF G SD + L +I + T + W
Sbjct: 198 -KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN--- 253
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
+ S+ A DL+SKM DP R+TA+Q L+H P
Sbjct: 254 ---------------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQH------PWV 286
Query: 301 TEPNKLPR 308
T+ +KLP+
Sbjct: 287 TQKDKLPQ 294
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
+ D Y E +G+G + VV + + TG A K I K + RE ++ + LK
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 70 SPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+I+ L D+ +G +LVF+ + E + V R + S AD +Q L+ +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLH 118
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
CH+ V+HRD+KP NLL+ S + +KLADFGLA + + Y +PE+L
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
+ YG VD+WA G I + L+ PF D +L + A PS
Sbjct: 179 -RKEAYGKPVDIWACGVILYILLVGYPPFW--DEDQHKLYQQIKAGAYDFPS-------- 227
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
P ++ P A +L+++M T +P RITA +AL+H
Sbjct: 228 -----------PEWDTVTPEAK----NLINQMLTINPAKRITAHEALKH 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
F ++L+ E+ L TV R LS D +Y+ L++CH K V+HR
Sbjct: 80 YFHDATRVYLILEY--APLGTVYRELQK-LSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP NLL+GS+G+LK+ADFG + +P R Y PE++ G + + VD+
Sbjct: 137 DIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDL 193
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
W+ G + E L P + + + +I T PD+V
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-----------FPDFV--------- 233
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
++ A DL+S++ ++ R+T + LEH
Sbjct: 234 --------TEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 34/279 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + ++ +A+K + + +K GV RE+++ L+ P+I+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79 AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
F ++L+ E+ ++ ++ + F +Y+ L++CH K V+HRD+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
KP NLL+GS G+LK+ADFG + +P R Y PE++ G + + VD+W+
Sbjct: 140 KPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEG-RMHDEKVDLWS 196
Query: 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257
G + E L +P + ++ + +I T PD+V
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV----------- 234
Query: 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
++ A DL+S++ ++P R ++ LEH + ++
Sbjct: 235 ------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIELID 78
+G G++G VY A D + + VAIKK+ GKQ ++E++ L++L+ P+ I+
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LV E+ ++ L +I + L+GLA+ H ++HRD+K
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 181
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGVDVW 196
N+L+ G +KL DFG A I +P F V ++ APE++ QY VDVW
Sbjct: 182 AGNILLSEPGLVKLGDFGSASIM-APANXF---VGTPYWMAPEVILAMDEGQYDGKVDVW 237
Query: 197 AAGCIFAELLNRRP 210
+ G EL R+P
Sbjct: 238 SLGITCIELAERKP 251
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
++ + D Y R+VLG G + V A D +T + VAIK I K EG + EI +L
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLH 71
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
++K P+I+ L D + G+L+L+ + + + ++ F + D + L +
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+ H ++HRD+KP NLL + ++ ++DFGL+++ P + Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+L K Y VD W+ G I LL P +D +I A W D+
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
SD A D + + DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIELID 78
+G G++G VY A D + + VAIKK+ GKQ ++E++ L++L+ P+ I+
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LV E+ ++ L +I + L+GLA+ H ++HRD+K
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGVDVW 196
N+L+ G +KL DFG A I +P F V ++ APE++ QY VDVW
Sbjct: 143 AGNILLSEPGLVKLGDFGSASIM-APANXF---VGTPYWMAPEVILAMDEGQYDGKVDVW 198
Query: 197 AAGCIFAELLNRRP 210
+ G EL R+P
Sbjct: 199 SLGITCIELAERKP 212
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
V D Y E LG G +GVV++ ++ TG+ K I + +T EI ++ +L
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH 106
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P +I L DAF K + L+ EF+ +L I + +S A++ +YM+ +GL H
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 129 KKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
+ ++H D+KP N++ + +K+ DFGLA +PD + APE++
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL-NPDEIVKVTTATAEFAAPEIV-DR 224
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
+ G D+WA G + LL+ G D++ L + W
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-------KRCDW---------- 267
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
E+ A F S S +A D + + +P+ R+T ALEH
Sbjct: 268 EFDEDA-------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 56/306 (18%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIKLL 65
V D Y E LG G + +V K TG+ A IKK RL + GV+ + RE+ +L
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 66 KELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
+E++ P+II L D F +K ++ L+ E + L+ + +++ L G+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 126 FCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFTHQ 171
+ H K + H D+KP N+++ ++KL DFG+A IFG+P+
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE------ 176
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230
+ APE++ + G D+W+ G I LL+ PFL G + + L I A
Sbjct: 177 -----FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISA---- 225
Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
V Y + F + S+ A D + ++ DPK R+T Q+LE
Sbjct: 226 ---------------VNYDFD-----EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265
Query: 291 HRYFSS 296
H + +
Sbjct: 266 HSWIKA 271
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
++ + D Y R+VLG G + V A D +T + VAIK I + EG + EI +L
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLH 71
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
++K P+I+ L D + G+L+L+ + + + ++ F + D + L +
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+ H ++HRD+KP NLL + ++ ++DFGL+++ P + Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+L K Y VD W+ G I LL P +D +I A W D+
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
SD A D + + DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 141/293 (48%), Gaps = 40/293 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D Y+K +GEG+ G+V A + +G+ VA+K + L KQ+ E+ ++++ +
Sbjct: 48 DSYVK---IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHF 102
Query: 72 HIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
+++E+ ++ L ++ EF++ TD+ + +R L+ I + + L+ LA+
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYL 157
Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
H + V+HRD+K +++L+ G++KL+DFG + V ++ APE++
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRS 216
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
Y VD+W+ G + E+++ P S + + ++ +P P ++
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-----RDSP---------PPKLK 262
Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
+ +P LR D L +M DP+ R TAQ+ L+H + LP
Sbjct: 263 NSHKVSPVLR-----------DFLERMLVRDPQERATAQELLDHPFLLQTGLP 304
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
++ + D Y R+VLG G + V A D +T + VAIK I + EG + EI +L
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLH 71
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
++K P+I+ L D + G+L+L+ + + + ++ F + D + L +
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+ H ++HRD+KP NLL + ++ ++DFGL+++ P + Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+L K Y VD W+ G I LL P +D +I A W D+
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
SD A D + + DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
++ + D Y R+VLG G + V A D +T + VAIK I + EG + EI +L
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLH 71
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
++K P+I+ L D + G+L+L+ + + + ++ F + D + L +
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+ H ++HRD+KP NLL + ++ ++DFGL+++ P + Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+L K Y VD W+ G I LL P +D +I A W D+
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
SD A D + + DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 44/311 (14%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLLK 66
K+ +YL ++LGEG+YG V + +D++T A+K ++ K + N A +EI+LL+
Sbjct: 2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 67 ELKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSP-ADIKSYMQMTLKG 123
L+ ++I+L+D K +++V E+ ++ ++ + P Y + G
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI---FGSPDRRFTHQVFARWYRAP 180
L + H + ++H+D+KP NLL+ + G LK++ G+A F + D T Q + ++ P
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ-GSPAFQPP 180
Query: 181 ELLFGAKQY-GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
E+ G + G VD+W+AG + +G D + K+F G + + D
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIGKGSYAIPGD- 235
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF----- 294
PPL DLL M Y+P R + +Q +H +F
Sbjct: 236 ------------CGPPLS-----------DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272
Query: 295 -SSAPLPTEPN 304
+ AP+P P+
Sbjct: 273 PAEAPVPIPPS 283
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG+G +G VYKA + +TG A K I ++E ++ EI++L P+I++L+ A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV--EIEILATCDHPYIVKLLGA 84
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ H G L ++ EF ++ ++ + L+ I+ + L+ L F H K ++HRD+K
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 139 PNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ----YGAGV 193
N+L+ G ++LADFG+ A+ + +R + + ++ APE++ Y
Sbjct: 145 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYV 251
D+W+ G E+ P + + L KI + TPS+W VE++
Sbjct: 204 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS--------VEFR-- 253
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
D L +P+ R +A Q LEH + SS
Sbjct: 254 -----------------DFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG+G +G VYKA + +TG A K I ++E ++ EI++L P+I++L+ A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV--EIEILATCDHPYIVKLLGA 76
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ H G L ++ EF ++ ++ + L+ I+ + L+ L F H K ++HRD+K
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 139 PNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ----YGAGV 193
N+L+ G ++LADFG+ A+ + +R + + ++ APE++ Y
Sbjct: 137 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYV 251
D+W+ G E+ P + + L KI + TPS+W VE++
Sbjct: 196 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS--------VEFR-- 245
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
D L +P+ R +A Q LEH + SS
Sbjct: 246 -----------------DFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 56/306 (18%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIKLL 65
V D Y E LG G + +V K TG+ A IKK RL + GV+ + RE+ +L
Sbjct: 10 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 66 KELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
+E++ P+II L D F +K ++ L+ E + L+ + +++ L G+
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 129
Query: 126 FCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFTHQ 171
+ H K + H D+KP N+++ ++KL DFG+A IFG+P+
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE------ 183
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230
+ APE++ + G D+W+ G I LL+ PFL G + + L I A
Sbjct: 184 -----FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISA---- 232
Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
V Y + F + S+ A D + ++ DPK R+ Q+LE
Sbjct: 233 ---------------VNYDFD-----EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 272
Query: 291 HRYFSS 296
H + +
Sbjct: 273 HSWIKA 278
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 141/313 (45%), Gaps = 57/313 (18%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK---------------------- 49
++Y ++ +G+G+YGVV A + A+K + K
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 50 --QKEGVNFTALREIKLLKELKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTN 105
Q G +EI +LK+L P++++L++ P++ +L++VFE + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165
LS + Y Q +KG+ + H + ++HRD+KP+NLL+G G +K+ADFG++ F D
Sbjct: 133 P-LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 166 RRFTHQVFARWYRAPELLFGAKQY--GAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLG 222
++ V + APE L ++ G +DVWA G ++ + + PF+ D+
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM------DERI 245
Query: 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282
+ + ++PD P ++D DL+++M +P++R
Sbjct: 246 MCLHSKIKSQALEFPDQ---------------------PDIAEDLKDLITRMLDKNPESR 284
Query: 283 ITAQQALEHRYFS 295
I + H + +
Sbjct: 285 IVVPEIKLHPWVT 297
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 56/306 (18%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIKLL 65
V D Y E LG G + +V K TG+ A IKK RL + GV+ + RE+ +L
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 66 KELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
+E++ P+II L D F +K ++ L+ E + L+ + +++ L G+
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 126 FCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFTHQ 171
+ H K + H D+KP N+++ ++KL DFG+A IFG+P+
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE------ 197
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230
+ APE++ + G D+W+ G I LL+ PFL G + + L I A
Sbjct: 198 -----FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISA---- 246
Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
V Y + F + S+ A D + ++ DPK R+ Q+LE
Sbjct: 247 ---------------VNYDFD-----EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 286
Query: 291 HRYFSS 296
H + +
Sbjct: 287 HSWIKA 292
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 32/286 (11%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D ++K +GEG+ G+V A +G+ VA+KK+ L KQ+ E+ ++++ +
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 208
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+++E+ +++ L +V EF+E T I T+ ++ I + L+ L+ H +
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
V+HRD+K +++L+ G++KL+DFG R V ++ APEL+ YG
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 326
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VD+W+ G + E+++ P + + I LP ++ +
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHK 372
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
+P L+ L ++ DP R TA + L+H + + A
Sbjct: 373 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKA 407
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-------GKQKEGVNFTALREIKL 64
+ Y +E+LG G VV + I T + A+K I + ++ + + L+E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 65 LKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+++ P+II+L D + LVF+ M+ + LS + + M+ L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
+ HK ++HRD+KP N+L+ +KL DFG + P + Y APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEII 195
Query: 184 FGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
+ YG VD+W+ G I LL P + L I + +W D
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
SD DL+S+ P+ R TA++AL H +F
Sbjct: 256 Y------------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-------GKQKEGVNFTALREIKL 64
+ Y +E+LG G VV + I T + A+K I + ++ + + L+E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 65 LKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+++ P+II+L D + LVF+ M+ + LS + + M+ L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
+ HK ++HRD+KP N+L+ +KL DFG + P + Y APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRSVCGTPSYLAPEII 195
Query: 184 FGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
+ YG VD+W+ G I LL P + L I + +W D
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
SD DL+S+ P+ R TA++AL H +F
Sbjct: 256 Y------------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G+YG K G+ + K++ G E + E+ LL+ELK P+I+ D
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 80 FPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPAD----IKSYMQMTLKGLAFCHKK-- 130
+ N L++V E+ E DL +VI D ++ Q+TL L CH++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSD 132
Query: 131 ---WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
VLHRD+KP N+ + +KL DFGLARI + V +Y +PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM-NRM 191
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
Y D+W+ GC+ EL P S + GKI P ++ D
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD 242
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-------GKQKEGVNFTALREIKL 64
+ Y +E+LG G VV + I T + A+K I + ++ + + L+E+ +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 65 LKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+++ P+II+L D + LVF+ M+ + LS + + M+ L+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
+ HK ++HRD+KP N+L+ +KL DFG + P + Y APE++
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEII 182
Query: 184 FGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
+ YG VD+W+ G I LL P + L I + +W D
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 242
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
SD DL+S+ P+ R TA++AL H +F
Sbjct: 243 Y------------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 130/303 (42%), Gaps = 72/303 (23%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIR----LGKQKEGVNFTALREIKL 64
Y+ + LG GT+G V TG VA+K KIR +GK K REI+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--------REIQN 64
Query: 65 LKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLK 122
LK + PHII+L + +V E++ + + ++ + + + Q L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQILS 122
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQV 172
+ +CH+ V+HRD+KP N+L+ +H K+ADFGL+ + GSP+
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPN------- 175
Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
Y APE++ G G VD+W+ G I +A L PF D + + +F
Sbjct: 176 ----YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIRGG 226
Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
+ Y+P+Y+ RS+ LL M DP R T + EH
Sbjct: 227 -------VFYIPEYLN---------RSV--------ATLLMHMLQVDPLKRATIKDIREH 262
Query: 292 RYF 294
+F
Sbjct: 263 EWF 265
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 83
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 141
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 197
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
Y D+W+ G E+ + R P GS + IF L DY+
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM----AIFE---------------LLDYI 238
Query: 247 EYQYVAAPPLRSLFPSA--SDDALDLLSKMFTYDPKARITAQQALEHRYF 294
V PP + PS S + D ++K +P R +Q + H +
Sbjct: 239 ----VNEPPPK--LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 282
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 130/303 (42%), Gaps = 72/303 (23%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIR----LGKQKEGVNFTALREIKL 64
Y+ + LG GT+G V TG VA+K KIR +GK K REI+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--------REIQN 64
Query: 65 LKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLK 122
LK + PHII+L + +V E++ + + ++ + + + Q L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQILS 122
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQV 172
+ +CH+ V+HRD+KP N+L+ +H K+ADFGL+ + GSP+
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN------- 175
Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
Y APE++ G G VD+W+ G I +A L PF D + + +F
Sbjct: 176 ----YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIRGG 226
Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
+ Y+P+Y+ RS+ LL M DP R T + EH
Sbjct: 227 -------VFYIPEYLN---------RSV--------ATLLMHMLQVDPLKRATIKDIREH 262
Query: 292 RYF 294
+F
Sbjct: 263 EWF 265
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 136/315 (43%), Gaps = 53/315 (16%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +VY+ T + A+K ++ K+ V EI +L L P+II+L +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR----TEIGVLLRLSHPNIIKLKEI 116
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
F + LV E + T E R + S D ++ L+ +A+ H+ ++HRD+K
Sbjct: 117 FETPTEISLVLELV-TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 139 PNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFAR------WYRAPELLFGAKQY 189
P NLL + LK+ADFGL++I HQV + Y APE+L G Y
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKI-------VEHQVLMKTVCGTPGYCAPEILRGC-AY 227
Query: 190 GAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
G VD+W+ G I + L PF D +I EY
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-------------------EY 268
Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP-----LPTEP 303
+++ + S +A DL+ K+ DPK R+T QAL+H + + + T
Sbjct: 269 YFIS-----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQ 323
Query: 304 NKLPRPATKRASKAS 318
KL +R KA+
Sbjct: 324 KKLQEFNARRKLKAA 338
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 29/282 (10%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+GEG+ G+V A + TG+ VA+KK+ L KQ+ E+ ++++ +++++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKP 139
+ L +V EF+E T I T+ ++ I + L+ L++ H + V+HRD+K
Sbjct: 111 YLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 140 NNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAG 199
+++L+ S G++KL+DFG + V ++ APE++ YG VD+W+ G
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI-SRLPYGTEVDIWSLG 228
Query: 200 CIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSL 259
+ E+++ P + + +I + LP V+ + + LR
Sbjct: 229 IMVIEMIDGEPPYFNEPPLQAMRRIRDS--------------LPPRVKDLHKVSSVLRGF 274
Query: 260 FPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
LDL M +P R TAQ+ L H + A P+
Sbjct: 275 --------LDL---MLVREPSQRATAQELLGHPFLKLAGPPS 305
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 36/290 (12%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+ D Y E LG+G + VV + + Q A K I K + RE ++ + L
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
K P+I+ L D+ +G +LVF+ + E + V R + S AD + L+ +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIHQILESVN 144
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
H+ ++HRD+KP NLL+ S + +KLADFGLA + + Y +PE+
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 183 LFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
L YG VD+WA G I + L+ PF D +L + A PS
Sbjct: 205 L-RKDPYGKPVDIWACGVILYILLVGYPPFW--DEDQHKLYQQIKAGAYDFPS------- 254
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
P ++ P A +L+++M T +P RITA QAL+H
Sbjct: 255 ------------PEWDTVTPEAK----NLINQMLTINPAKRITADQALKH 288
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 32/290 (11%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D ++K +GEG+ G+V A +G+ VA+KK+ L KQ+ E+ ++++ +
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 131
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+++E+ +++ L +V EF+E T I T+ ++ I + L+ L+ H +
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
V+HRD+K +++L+ G++KL+DFG R V ++ APEL+ YG
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 249
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VD+W+ G + E+++ P + + I LP ++ +
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 295
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
+P L+ L ++ DP R TA + L+H + + A P
Sbjct: 296 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 334
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 126
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 184
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 240
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G E+ + R P
Sbjct: 241 HYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG+G +G VYKA + +T A K I ++E ++ + EI +L P+I++L+DA
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDA 102
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
F ++ NL ++ EF ++ V+ L+ + I+ + TL L + H ++HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA----KQYGAGVD 194
N+L G +KLADFG++ +R + ++ APE++ + Y D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYVA 252
VW+ G E+ P + + L KI + A PS+W
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---------------- 266
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
S + D L K + AR T Q L+H + +
Sbjct: 267 -----------SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D ++K +GEG+ G+V A +G+ VA+KK+ L KQ+ E+ ++++ +
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 88
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+++E+ +++ L +V EF+E T I T+ ++ I + L+ L+ H +
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
V+HRD+K +++L+ G++KL+DFG R V ++ APEL+ YG
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 206
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VD+W+ G + E+++ P + + I LP ++ +
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 252
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
+P L+ L ++ DP R TA + L+H + + A P
Sbjct: 253 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKAGPP 290
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 32/286 (11%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D ++K +GEG+ G+V A +G+ VA+KK+ L KQ+ E+ ++++ +
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 86
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+++E+ +++ L +V EF+E T I T+ ++ I + L+ L+ H +
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
V+HRD+K +++L+ G++KL+DFG R V ++ APEL+ YG
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 204
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VD+W+ G + E+++ P + + I LP ++ +
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 250
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
+P L+ L ++ DP R TA + L+H + + A
Sbjct: 251 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKA 285
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G+YG K G+ + K++ G E + E+ LL+ELK P+I+ D
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 80 FPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPAD----IKSYMQMTLKGLAFCHKK-- 130
+ N L++V E+ E DL +VI D ++ Q+TL L CH++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSD 132
Query: 131 ---WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
VLHRD+KP N+ + +KL DFGLARI V +Y +PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-NRM 191
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
Y D+W+ GC+ EL P S + GKI P ++ D
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD 242
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG+G +G VYKA + +T A K I ++E ++ + EI +L P+I++L+DA
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDA 102
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
F ++ NL ++ EF ++ V+ L+ + I+ + TL L + H ++HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA----KQYGAGVD 194
N+L G +KLADFG++ +R + ++ APE++ + Y D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYVA 252
VW+ G E+ P + + L KI + A PS+W
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---------------- 266
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
S + D L K + AR T Q L+H + +
Sbjct: 267 -----------SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G+YG K G+ + K++ G E + E+ LL+ELK P+I+ D
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 80 FPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPAD----IKSYMQMTLKGLAFCHKK-- 130
+ N L++V E+ E DL +VI D ++ Q+TL L CH++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSD 132
Query: 131 ---WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
VLHRD+KP N+ + +KL DFGLARI V +Y +PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRM 191
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
Y D+W+ GC+ EL P S + GKI P ++ D
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD 242
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG+G +G VYKA + +T A K I ++E ++ + EI +L P+I++L+DA
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDA 102
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
F ++ NL ++ EF ++ V+ L+ + I+ + TL L + H ++HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA----KQYGAGVD 194
N+L G +KLADFG++ +R + ++ APE++ + Y D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYVA 252
VW+ G E+ P + + L KI + A PS+W
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---------------- 266
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
S + D L K + AR T Q L+H + +
Sbjct: 267 -----------SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + + LG G GVV K +G +A K I L + K + +RE+++L E SP
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 74
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P +I + + L+GLA+ +
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRI--PEEILGKVSIAVLRGLAYLRE 132
Query: 130 K-WVLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y APE L G
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMAPERLQGT- 188
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G EL + R P
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D ++K +GEG+ G+V A +G+ VA+KK+ L KQ+ E+ ++++ +
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 77
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+++E+ +++ L +V EF+E T I T+ ++ I + L+ L+ H +
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
V+HRD+K +++L+ G++KL+DFG R V ++ APEL+ YG
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 195
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VD+W+ G + E+++ P + + I LP ++ +
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 241
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
+P L+ L ++ DP R TA + L+H + + A P
Sbjct: 242 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 32/302 (10%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D ++K +GEG+ G+V A +G+ VA+KK+ L KQ+ E+ ++++ +
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 81
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+++E+ +++ L +V EF+E T I T+ ++ I + L+ L+ H +
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
V+HRD+K +++L+ G++KL+DFG R V ++ APEL+ YG
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 199
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VD+W+ G + E+++ P + + I LP ++ +
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 245
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT 311
+P L+ L ++ DP R TA + L+H + + A P L R
Sbjct: 246 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 294
Query: 312 KR 313
R
Sbjct: 295 TR 296
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G E+ + R P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G E+ + R P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G E+ + R P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 91
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 149
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 205
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G E+ + R P
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 150/358 (41%), Gaps = 57/358 (15%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
S + D Y +E +G G+Y V + I T A+K I K+ T EI LL+
Sbjct: 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP----TEEIEI-LLR 71
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
+ P+II L D + +++V E M+ L+ ++R F S + + + K +
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTV 129
Query: 125 AFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
+ H + V+HRD+KP+N+L G+ +++ DFG A+ + + + + AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAP 189
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
E+L + Y A D+W+ G + +L PF G D + +I A G+ S
Sbjct: 190 EVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSGKFSLSG-- 244
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
+ S SD A DL+SKM DP R+TA L H P
Sbjct: 245 ------------------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH------PW 280
Query: 300 PTEPNKLPRPATKR-----------ASKASDFNPQEGPTVLSPPRKTRRVMPDREGFE 346
++LP+ R A+ S N + P VL P R + R G +
Sbjct: 281 IVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSP-VLEPV--GRSTLAQRRGIK 335
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G E+ + R P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
K ++HRD+KP+N+L+ S G++KL DFG++ ++ S F V R Y +PE L G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
Y D+W+ G E+ + R P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 38/287 (13%)
Query: 18 EVLGE-GTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E++GE G +G VYKA + +T A K I ++E ++ + EI +L P+I++L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKL 72
Query: 77 IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
+DAF ++ NL ++ EF ++ V+ L+ + I+ + TL L + H ++HR
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGA----KQYG 190
D+K N+L G +KLADFG+ A+ + +R + ++ APE++ + Y
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEY 248
DVW+ G E+ P + + L KI + A PS+W
Sbjct: 193 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW------------ 240
Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
S + D L K + AR T Q L+H + +
Sbjct: 241 ---------------SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 272
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHII 74
R VLG+GTYG+VY D +AIK+I R + + ++ EI L K LK +I+
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH----EEIALHKHLKHKNIV 82
Query: 75 ELIDAFPHKGNLHLVFEFMET----DLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCH 128
+ + +F G + + FME L ++R+ L + I Y + L+GL + H
Sbjct: 83 QYLGSFSENGFIKI---FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL-FGA 186
++HRD+K +N+LI ++ G LK++DFG ++ + Y APE++ G
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
+ YG D+W+ GC E+ +P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKP 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D + K LG G GVV+K +G +A K I L + K + +RE+++L E SP
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 67
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
+I+ AF G + + E M+ L+ V++ P I + + +KGL + +
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 125
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
K ++HRD+KP+N+L+ S G++KL DFG++ D V R Y +PE L G
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDEMANEFVGTRSYMSPERLQGT-H 182
Query: 189 YGAGVDVWAAGCIFAEL-LNRRP 210
Y D+W+ G E+ + R P
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELID 78
+G G + VY+A G VA+KK+++ + ++EI LLK+L P++I+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 79 AFPHKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+F L++V E + DL +I++ + + Y L H + V+H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
RD+KP N+ I + G +KL D GL R F S V +Y +PE + Y D
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH-ENGYNFKSD 218
Query: 195 VWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223
+W+ GC+ E+ + PF ++ L K
Sbjct: 219 IWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHII 74
R VLG+GTYG+VY D +AIK+I R + + ++ EI L K LK +I+
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH----EEIALHKHLKHKNIV 68
Query: 75 ELIDAFPHKGNLHLVFEFMET----DLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCH 128
+ + +F G + + FME L ++R+ L + I Y + L+GL + H
Sbjct: 69 QYLGSFSENGFIKI---FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL-FGA 186
++HRD+K +N+LI ++ G LK++DFG ++ + Y APE++ G
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
+ YG D+W+ GC E+ +P
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKP 209
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
+E LG G + V A + TG+ A+K I K +G + EI +L+++K +I+ L
Sbjct: 27 KETLGTGAFSEVVLAEEKATGKLFAVKCIP-KKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 77 IDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
D + +L+LV + + + ++ F + D + ++ L + + H+ ++H
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKG--FYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 135 RDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
RD+KP NLL S ++ ++DFGL+++ G D T Y APE+L K Y
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST-ACGTPGYVAPEVL-AQKPYSK 201
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VD W+ G I LL P +D +I A W D+
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI------------ 249
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
SD A D + + DP R T +QA H + +
Sbjct: 250 ------------SDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELK 69
Y ++ +G+G + V A TG+ VA+K I K +N T+L RE++++K L
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKII----DKTQLNPTSLQKLFREVRIMKILN 72
Query: 70 SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I++L + + L+LV E+ + + + ++ + + + +CH+
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
K+++HRD+K NLL+ +K+ADFG + F ++ T + Y APEL G K
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF-CGSPPYAAPELFQGKKYD 191
Query: 190 GAGVDVWAAGCIFAELLN 207
G VDVW+ G I L++
Sbjct: 192 GPEVDVWSLGVILYTLVS 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
+ K E +G+G++G V+K ID +T + VAIK I L + ++ + +EI +L + SP++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 82
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+ ++ L ++ E++ + L I + ++ LKGL + H + +
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 141
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K N+L+ HG++KLADFG+A + V ++ APE++ Y +
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKA 200
Query: 194 DVWAAGCIFAELLNRRP 210
D+W+ G EL P
Sbjct: 201 DIWSLGITAIELARGEP 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 19 VLGEGTYGVVY---KAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREIKLLKELKSP 71
VLG+G YG V+ K TG+ A+K ++ + K+ + A R I L+E+K P
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHP 81
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
I++LI AF G L+L+ E++ +L + IF+ ++++ L H+K
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM-ALGHLHQK 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQY 189
+++RD+KP N+++ G +KL DFGL + D TH Y APE+L +
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSGHN 199
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
A VD W+ G + ++L P G + + KI
Sbjct: 200 RA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 19 VLGEGTYGVVY---KAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREIKLLKELKSP 71
VLG+G YG V+ K TG+ A+K ++ + K+ + A R I L+E+K P
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHP 81
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
I++LI AF G L+L+ E++ +L + IF+ ++++ L H+K
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM-ALGHLHQK 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQY 189
+++RD+KP N+++ G +KL DFGL + D TH Y APE+L +
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSGHN 199
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
A VD W+ G + ++L P G + + KI
Sbjct: 200 RA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 181
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 182 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 228
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 229 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
Query: 289 LEH 291
L+H
Sbjct: 269 LQH 271
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 134/328 (40%), Gaps = 50/328 (15%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
++ RY + LGEG +G V + ID K G+ VA+K + K + A EI++L+ L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHL 68
Query: 69 KSP------HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTL 121
+ +++++ F H G++ +VFE + I+ D I+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG-------------------QLKLADFGLARIFG 162
K + F H + H D+KP N+L +K+ DFG A
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---T 185
Query: 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL---LNRRPFLQGSSDID 219
D + V R YRAPE++ A + DVW+ GCI E P +
Sbjct: 186 YDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 220 QLGKIFAAFGTATPSQWPDLAYLP----DYVEY----QYV--AAPPLRSLFPSAS---DD 266
+ +I + Y D+ E+ +YV A PL+ S +
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
DL+ KM YDP RIT ++AL+H +F
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 181
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 182 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 228
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 229 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
Query: 289 LEH 291
L+H
Sbjct: 269 LQH 271
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
+ K E +G+G++G V+K ID +T + VAIK I L + ++ + +EI +L + SP++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 87
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+ ++ L ++ E++ + L I + ++ LKGL + H + +
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 146
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K N+L+ HG++KLADFG+A + V ++ APE++ Y +
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKA 205
Query: 194 DVWAAGCIFAELLNRRP 210
D+W+ G EL P
Sbjct: 206 DIWSLGITAIELARGEP 222
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 38/247 (15%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--- 69
RY+ LG G + V+ A D VA+K +R K A EIKLL+ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKLLQRVNDAD 76
Query: 70 --------SPHIIELIDAFPHKG----NLHLVFEFMETDLETVIRNTNIFLSP-ADIKSY 116
+ HI++L+D F HKG ++ +VFE + +L +I+ P +K
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 117 MQMTLKGLAFCHKKW-VLHRDMKPNNLLIG------SHGQLKLADFGLARIFGSPDRRFT 169
+ L GL + H++ ++H D+KP N+L+ + Q+K+AD G A + D +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYT 193
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFL----QGSS---DIDQLG 222
+ + R YR+PE+L GA +G G D+W+ C+ EL+ FL +G S D D +
Sbjct: 194 NSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELIT-GDFLFEPDEGHSYTKDDDHIA 251
Query: 223 KIFAAFG 229
+I G
Sbjct: 252 QIIELLG 258
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
+ K E +G+G++G V+K ID +T + VAIK I L + ++ + +EI +L + SP++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 67
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+ ++ L ++ E++ + L I + ++ LKGL + H + +
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 126
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K N+L+ HG++KLADFG+A + V ++ APE++ Y +
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKA 185
Query: 194 DVWAAGCIFAELLNRRP 210
D+W+ G EL P
Sbjct: 186 DIWSLGITAIELARGEP 202
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 30/217 (13%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--- 69
RY+ LG G + V+ A D VA+K +R K A EIKLL+ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKLLQRVNDAD 76
Query: 70 --------SPHIIELIDAFPHKG----NLHLVFEFMETDLETVIRNTNIFLSP-ADIKSY 116
+ HI++L+D F HKG ++ +VFE + +L +I+ P +K
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 117 MQMTLKGLAFCHKKW-VLHRDMKPNNLLIG------SHGQLKLADFGLARIFGSPDRRFT 169
+ L GL + H++ ++H D+KP N+L+ + Q+K+AD G A + D +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYT 193
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ + R YR+PE+L GA +G G D+W+ C+ EL+
Sbjct: 194 NSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELI 229
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 134/328 (40%), Gaps = 50/328 (15%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
++ RY + LGEG +G V + ID K G+ VA+K + K + A EI++L+ L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHL 68
Query: 69 KSP------HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTL 121
+ +++++ F H G++ +VFE + I+ D I+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG-------------------QLKLADFGLARIFG 162
K + F H + H D+KP N+L +K+ DFG A
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---T 185
Query: 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL---LNRRPFLQGSSDID 219
D + V R YRAPE++ A + DVW+ GCI E P +
Sbjct: 186 YDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 220 QLGKIFAAFGTATPSQWPDLAYLP----DYVEY----QYV--AAPPLRSLFPSAS---DD 266
+ +I + Y D+ E+ +YV A PL+ S +
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
DL+ KM YDP RIT ++AL+H +F
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
+ K E +G+G++G V+K ID +T + VAIK I L + ++ + +EI +L + SP++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 67
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+ ++ L ++ E++ + L I + ++ LKGL + H + +
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 126
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K N+L+ HG++KLADFG+A + V ++ APE++ Y +
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKA 185
Query: 194 DVWAAGCIFAELLNRRP 210
D+W+ G EL P
Sbjct: 186 DIWSLGITAIELARGEP 202
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VA+K I K +N ++L RE++++K L P+I
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+LV E+ + + + ++ + + + +CH+K+++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
HRD+K NLL+ + +K+ADFG + FG+ F A Y APEL G K G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---APPYAAPELFQGKKYDGP 192
Query: 192 GVDVWAAGCIFAELLN 207
VDVW+ G I L++
Sbjct: 193 EVDVWSLGVILYTLVS 208
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 50/308 (16%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D Y +EV+G G VV A + VAIK+I L K + ++ L+EI+ + + P
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHP 73
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNT-------NIFLSPADIKSYMQMTLKG 123
+I+ +F K L LV + + + +I++ + L + I + ++ L+G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQVFAR--WYR 178
L + HK +HRD+K N+L+G G +++ADFG++ G R + F +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ + Y D+W+ G EL A G A ++P
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIEL---------------------ATGAAPYHKYPP 232
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDAL---------DLLSKMFTYDPKARITAQQAL 289
+ L ++ PP SL D + ++S DP+ R TA + L
Sbjct: 233 MKVLMLTLQND----PP--SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
Query: 290 EHRYFSSA 297
H++F A
Sbjct: 287 RHKFFQKA 294
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VA+K I K +N ++L RE++++K L P+I
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+LV E+ + ++ + ++ + + + +CH+K+++
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K NLL+ + +K+ADFG + F ++ T + Y APEL G K G V
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 187
Query: 194 DVWAAGCIFAELLN 207
DVW+ G I L++
Sbjct: 188 DVWSLGVILYTLVS 201
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 58/323 (17%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+KV D Y E LG G + +V K + TG A IKK + + GV + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+L+++ P+II L D + ++ ++ L+ E + LS + S+++ L G
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H K + H D+KP N+++ +KL DFGLA IFG+P+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L I A
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITA-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
++Y D+ E F S+ A D + K+ + + R+T Q+A
Sbjct: 233 ----------VSY--DFDE----------EFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFSSAPLPTEPNKLPRPAT 311
L H + + P+ T+ + R +
Sbjct: 271 LRHPWIT--PVDTQQAMVRRESV 291
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 50/308 (16%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D Y +EV+G G VV A + VAIK+I L K + ++ L+EI+ + + P
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHP 68
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNT-------NIFLSPADIKSYMQMTLKG 123
+I+ +F K L LV + + + +I++ + L + I + ++ L+G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQVFAR--WYR 178
L + HK +HRD+K N+L+G G +++ADFG++ G R + F +
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
APE++ + Y D+W+ G EL A G A ++P
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIEL---------------------ATGAAPYHKYPP 227
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDAL---------DLLSKMFTYDPKARITAQQAL 289
+ L ++ PP SL D + ++S DP+ R TA + L
Sbjct: 228 MKVLMLTLQND----PP--SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
Query: 290 EHRYFSSA 297
H++F A
Sbjct: 282 RHKFFQKA 289
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA----------RIFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VA+K I K +N ++L RE++++K L P+I
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+LV E+ + + + ++ + + + +CH+K+++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K NLL+ + +K+ADFG + F ++ T + Y APEL G K G V
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 194
Query: 194 DVWAAGCIFAELLN 207
DVW+ G I L++
Sbjct: 195 DVWSLGVILYTLVS 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
EVLG+G +G K +TG+ + +K+ L + E T L+E+K+++ L+ P++++ I
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKE--LIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
L+ + E+++ L +I++ + + S+ + G+A+ H ++HRD
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 137 MKPNNLLIGSHGQLKLADFGLARI-------------FGSPDRRFTHQVFAR-WYRAPEL 182
+ +N L+ + + +ADFGLAR+ PDR+ + V ++ APE+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNR 208
+ G + Y VDV++ G + E++ R
Sbjct: 194 ING-RSYDEKVDVFSFGIVLCEIIGR 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VA+K I K +N ++L RE++++K L P+I
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+LV E+ + + + ++ + + + +CH+K+++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K NLL+ + +K+ADFG + F ++ T + Y APEL G K G V
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 194
Query: 194 DVWAAGCIFAELLN 207
DVW+ G I L++
Sbjct: 195 DVWSLGVILYTLVS 208
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+ V D Y E LG G + VV K + TG A IKK R + GV+ + RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+LKE++ P++I L + + +K ++ L+ E + L+ + +++ L G
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H + H D+KP N+++ ++K+ DFGLA IFG+P+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L +
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
+A ++ D EY F + S A D + ++ DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
L+H
Sbjct: 270 LQH 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 148/358 (41%), Gaps = 57/358 (15%)
Query: 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
S + D Y +E +G G+Y V + I T A+K I K+ T EI LL+
Sbjct: 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDP----TEEIEI-LLR 71
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
+ P+II L D + +++V E + L+ ++R F S + + + K +
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTV 129
Query: 125 AFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
+ H + V+HRD+KP+N+L G+ +++ DFG A+ + + + + AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAP 189
Query: 181 ELLFGAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
E+L + Y A D+W+ G ++ L PF G D + +I A G+ S
Sbjct: 190 EVL-ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPE--EILARIGSGKFSLSG-- 244
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
+ S SD A DL+SK DP R+TA L H P
Sbjct: 245 ------------------GYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRH------PW 280
Query: 300 PTEPNKLPRPATKR-----------ASKASDFNPQEGPTVLSPPRKTRRVMPDREGFE 346
++LP+ R A+ S N + P VL P R + R G +
Sbjct: 281 IVHWDQLPQYQLNRQDAPHLVKGAXAATYSALNRNQSP-VLEPV--GRSTLAQRRGIK 335
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VA++ I K +N ++L RE++++K L P+I
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+LV E+ + + + ++ + + + +CH+K+++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
HRD+K NLL+ + +K+ADFG + FG+ F + Y APEL G K G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG---SPPYAAPELFQGKKYDGP 192
Query: 192 GVDVWAAGCIFAELLN 207
VDVW+ G I L++
Sbjct: 193 EVDVWSLGVILYTLVS 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VAIK I K +N T+L RE++++K L P+I
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKII----DKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+L+ E+ + + + +S + + + +CH+K ++
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K NLL+ + +K+ADFG + F + + A Y APEL G K G V
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEF-TVGGKLDAFCGAPPYAAPELFQGKKYDGPEV 195
Query: 194 DVWAAGCIFAELLN 207
DVW+ G I L++
Sbjct: 196 DVWSLGVILYTLVS 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 58/293 (19%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLK 66
K+ D ++ ++LG+G++G V+ A KT Q AIK ++ + + V T + + L
Sbjct: 15 KIED-FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIF-LSPADIKSYMQMTLKGL 124
+ P + + F K NL V E++ DL I++ + F LS A Y + GL
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGL 131
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVF 173
F H K +++RD+K +N+L+ G +K+ADFG+ + G+PD
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD-------- 183
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G K Y VD W+ G + E+L + G + ++F + P
Sbjct: 184 ---YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIRMDNP 235
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
+ P ++E +A DLL K+F +P+ R+ +
Sbjct: 236 -------FYPRWLE-----------------KEAKDLLVKLFVREPEKRLGVR 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VA++ I K +N ++L RE++++K L P+I
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+LV E+ + + + ++ + + + +CH+K+++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K NLL+ + +K+ADFG + F ++ T + Y APEL G K G V
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 194
Query: 194 DVWAAGCIFAELLN 207
DVW+ G I L++
Sbjct: 195 DVWSLGVILYTLVS 208
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 145/345 (42%), Gaps = 49/345 (14%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
VLG+G++G V A T + AIK ++ + Q + V T + + L K P + +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ V E++ DL I+ F P + ++++ GL F HK+ +++R
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI-GLFFLHKRGIIYR 144
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
D+K +N+++ S G +K+ADFG+ + + G R F Y APE++ + YG
Sbjct: 145 DLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCG---TPDYIAPEII-AYQPYGKS 200
Query: 193 VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
VD WA G + E+L +P G D D+L + + P
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDG-EDEDELFQSIMEHNVSYPK------------------ 241
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLP 307
S S +A+ + + T P R+ + EH +F N+
Sbjct: 242 ---------SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREI 292
Query: 308 RPATK---RASKASDFNP--QEGPTVLSPPRKTRRVMPDREGFEG 347
+P K A +F+ G VL PP + D+ FEG
Sbjct: 293 QPPFKPKVCGKGAENFDKFFTRGQPVLXPPDQLVIANIDQSDFEG 337
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VAIK I K +N T+L RE++++K L P+I
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKII----DKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+L+ E+ + + + +S + + + +CH+K ++
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K NLL+ + +K+ADFG + F + T + Y APEL G K G V
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-CGSPPYAAPELFQGKKYDGPEV 192
Query: 194 DVWAAGCIFAELLN 207
DVW+ G I L++
Sbjct: 193 DVWSLGVILYTLVS 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 34/274 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELID 78
LG+G +G VY A + K+ VA+K + + +KEGV REI++ L P+I+ L +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 79 AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
F + ++L+ E+ +L ++ + F + M+ L +CH K V+HRD+
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCHGKKVIHRDI 149
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
KP NLL+G G+LK+ADFG + +P R Y PE++ G + + VD+W
Sbjct: 150 KPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEG-RMHNEKVDLWC 206
Query: 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257
G + ELL P + +S + +I V+ ++ A+ P
Sbjct: 207 IGVLCYELLVGNPPFESASHNETYRRIVK-------------------VDLKFPASVP-- 245
Query: 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
A DL+SK+ ++P R+ Q H
Sbjct: 246 -------TGAQDLISKLLRHNPSERLPLAQVSAH 272
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
++G G +G VY TG+ A+K +I++ KQ E + + L+ P I
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 253
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
+ + AF L + + M DL + +F S AD++ Y + GL H ++V
Sbjct: 254 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 312
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
++RD+KP N+L+ HG ++++D GLA F ++ V Y APE+L Y +
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 370
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
D ++ GC+ +LL PF Q + D ++ ++ P + P+L L
Sbjct: 371 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 423
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
++G G +G VY TG+ A+K +I++ KQ E + + L+ P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 254
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
+ + AF L + + M DL + +F S AD++ Y + GL H ++V
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 313
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
++RD+KP N+L+ HG ++++D GLA F ++ V Y APE+L Y +
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
D ++ GC+ +LL PF Q + D ++ ++ P + P+L L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 424
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
+ +G+G + V A TG+ VA+K I K +N ++L RE+++ K L P+I
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++L + + L+LV E+ + + ++ + + + +CH+K+++
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
HRD+K NLL+ + +K+ADFG + FG+ F A Y APEL G K G
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG---APPYAAPELFQGKKYDGP 192
Query: 192 GVDVWAAGCIFAELLN 207
VDVW+ G I L++
Sbjct: 193 EVDVWSLGVILYTLVS 208
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
++G G +G VY TG+ A+K +I++ KQ E + + L+ P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 254
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
+ + AF L + + M DL + +F S AD++ Y + GL H ++V
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 313
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
++RD+KP N+L+ HG ++++D GLA F ++ V Y APE+L Y +
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
D ++ GC+ +LL PF Q + D ++ ++ P + P+L L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 424
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
++G G +G VY TG+ A+K +I++ KQ E + + L+ P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 254
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
+ + AF L + + M DL + +F S AD++ Y + GL H ++V
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 313
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
++RD+KP N+L+ HG ++++D GLA F ++ V Y APE+L Y +
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
D ++ GC+ +LL PF Q + D ++ ++ P + P+L L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 424
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 58/293 (19%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLK 66
K+ D L + +LG+G++G V+ A KT Q AIK ++ + + V T + + L
Sbjct: 16 KIEDFELHK-MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIF-LSPADIKSYMQMTLKGL 124
+ P + + F K NL V E++ DL I++ + F LS A Y + GL
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGL 132
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVF 173
F H K +++RD+K +N+L+ G +K+ADFG+ + G+PD
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD-------- 184
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
Y APE+L G K Y VD W+ G + E+L + G + ++F + P
Sbjct: 185 ---YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIRMDNP 236
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
+ P ++E +A DLL K+F +P+ R+ +
Sbjct: 237 -------FYPRWLE-----------------KEAKDLLVKLFVREPEKRLGVR 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+DRY + +G G +GV D ++ + VA+K I G E ++ REI + L+
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIDENVKREIINHRSLRH 73
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ + +L +V E+ +L I N F S + + + Q + G+++CH
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 132
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
V HRD+K N LL GS +LK+ DFG ++ + P V Y APE+L
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLL 188
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ G DVW+ G ++ L+ PF D ++ Q+ +P
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 240
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
DYV +P R L+S++F DP RI+ + H +F
Sbjct: 241 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKSPH 72
Y E +G G + V A TG+ VAIK + K G + ++ EI+ LK L+ H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKI--MDKNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
I +L + +V E+ + +I LS + + + + +A+ H +
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHSQ 127
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
HRD+KP NLL + +LKL DFGL A+ G+ D + Y APEL+ G
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 190 GAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYV 246
G+ DVW+ G + L+ PF D D + ++ G +W
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPF-----DDDNVMALYKKIMRGKYDVPKW---------- 232
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
L PS ++ LL +M DPK RI+ + L H
Sbjct: 233 ------------LSPS----SILLLQQMLQVDPKKRISMKNLLNH 261
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
+ K E +G+G++G V+K ID +T Q VAIK I L + ++ + +EI +L + S ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSSYV 83
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+ ++ L ++ E++ + F I + ++ LKGL + H + +
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF-DEFQIATMLKEILKGLDYLHSEKKI 142
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K N+L+ G +KLADFG+A + V ++ APE++ Y +
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYDSKA 201
Query: 194 DVWAAGCIFAELLNRRP 210
D+W+ G EL P
Sbjct: 202 DIWSLGITAIELAKGEP 218
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL-- 76
VLG+G +G V KA + + AIKKIR ++K T L E+ LL L +++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYA 69
Query: 77 -----------IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+ A K L + E+ E L +I + N+ + + L+ L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR---------------IFGSPDRRFT 169
++ H + ++HRD+KP N+ I +K+ DFGLA+ + GS D T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-NLT 188
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
+ Y A E+L G Y +D+++ G IF E++ PF G ++ L K+
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKL 241
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL-- 76
VLG+G +G V KA + + AIKKIR ++K T L E+ LL L +++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYA 69
Query: 77 -----------IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+ A K L + E+ E L +I + N+ + + L+ L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR---------------IFGSPDRRFT 169
++ H + ++HRD+KP N+ I +K+ DFGLA+ + GS D T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-NLT 188
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
+ Y A E+L G Y +D+++ G IF E++ PF G ++ L K+
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKL 241
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+DRY + +G G +GV D ++ + VA+K I G E + REI + L+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIAANVKREIINHRSLRH 74
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ + +L +V E+ +L I N F S + + + Q + G+++CH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 133
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
V HRD+K N LL GS +LK+ DFG ++ + P V Y APE+L
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ G DVW+ G ++ L+ PF D ++ Q+ +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
DYV +P R L+S++F DP RI+ + H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 146/351 (41%), Gaps = 73/351 (20%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
+ +RY LGEGT+G V + +D + G VA+K I+ + K KE A EI +L++
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA----ARLEINVLEK 86
Query: 68 L--KSPH----IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+ K P +++ D F + G++ + FE + +++ N P +M L
Sbjct: 87 INEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQL 146
Query: 122 -KGLAFCHKKWVLHRDMKPNNLL-IGSHGQL------------------KLADFGLARIF 161
+ + F H + H D+KP N+L + S +L ++ DFG A
Sbjct: 147 CQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT-- 204
Query: 162 GSPDRRFTHQ-----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
F H+ V R YRAPE++ + DVW+ GCI E Q
Sbjct: 205 ------FDHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHD 257
Query: 217 DIDQLGKIFAAFGTATPSQ-----------------WPDLAYLPDYVEYQYVAAPPLRSL 259
+ + L + G PS+ W + YV PLR
Sbjct: 258 NREHLAMMERILG-PIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVREN---CKPLRRY 313
Query: 260 FPSASDD---ALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE-PNKL 306
S +++ DL+ M Y+P R+T +AL+H +F A L E PNKL
Sbjct: 314 LTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF--ARLRAEPPNKL 362
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 30/282 (10%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
+ K + +G+G++G VYK ID T + VAIK I L + ++ + +EI +L + SP+I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYI 79
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
++ L ++ E++ + L I + ++ LKGL + H + +
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKI 138
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
HRD+K N+L+ G +KLADFG+A + V ++ APE++ Y
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDFKA 197
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+W+ G EL P +SD+ + +F + P+ +E Q+ +
Sbjct: 198 DIWSLGITAIELAKGEP---PNSDLHPMRVLFLIPKNSPPT-----------LEGQH--S 241
Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + + + DP+ R TA++ L+H++ +
Sbjct: 242 KPFK-----------EFVEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
+ +V + + RY++ LG+G + Y+ D T + A + K L K QKE ++
Sbjct: 31 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 56 FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
EI + K L +PH++ F +++V E + ++ + +
Sbjct: 91 ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
+M+ T++G+ + H V+HRD+K NL + +K+ DFGLA R
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
Y APE+L K + VD+W+ GCI LL +P + S
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
+ +V + + RY++ LG+G + Y+ D T + A + K L K QKE ++
Sbjct: 31 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 56 FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
EI + K L +PH++ F +++V E + ++ + +
Sbjct: 91 ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
+M+ T++G+ + H V+HRD+K NL + +K+ DFGLA R
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
Y APE+L K + VD+W+ GCI LL +P + S
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
+ +V + + RY++ LG+G + Y+ D T + A + K L K QKE ++
Sbjct: 15 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 74
Query: 56 FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
EI + K L +PH++ F +++V E + ++ + +
Sbjct: 75 ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
+M+ T++G+ + H V+HRD+K NL + +K+ DFGLA R
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
Y APE+L K + VD+W+ GCI LL +P + S
Sbjct: 191 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 230
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
+ +V + + RY++ LG+G + Y+ D T + A + K L K QKE ++
Sbjct: 31 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 56 FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
EI + K L +PH++ F +++V E + ++ + +
Sbjct: 91 ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
+M+ T++G+ + H V+HRD+K NL + +K+ DFGLA R
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
Y APE+L K + VD+W+ GCI LL +P + S
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 68
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 69 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 126
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 187 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 225
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 226 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 56/307 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+KV D Y E LG G + +V K + TG A IKK + + GV+ + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+L+++ ++I L D + ++ ++ L+ E + LS + S+++ L G
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H K + H D+KP N+++ +KL DFGLA IFG+P+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L I A
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITA-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
V Y + F S+ A D + K+ + + R+T Q+A
Sbjct: 233 -----------------VSYDFD-----EEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFS 295
L H + +
Sbjct: 271 LRHPWIT 277
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 56/307 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+KV D Y E LG G + +V K + TG A IKK + + GV+ + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+L+++ ++I L D + ++ ++ L+ E + LS + S+++ L G
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H K + H D+KP N+++ +KL DFGLA IFG+P+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L I A
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITA-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
V Y + F S+ A D + K+ + + R+T Q+A
Sbjct: 233 -----------------VSYDFD-----EEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFS 295
L H + +
Sbjct: 271 LRHPWIT 277
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+DRY + +G G +GV D ++ + VA+K I G E ++ REI + L+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIDENVKREIINHRSLRH 74
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ + +L +V E+ +L I N F S + + + Q + G+++CH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 133
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
V HRD+K N LL GS +LK+ FG ++ + P V Y APE+L
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS----TVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ G DVW+ G ++ L+ PF D ++ Q+ +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
DYV +P R L+S++F DP RI+ + H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSXQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+DRY + +G G +GV D ++ + VA+K I G E ++ REI + L+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIDENVKREIINHRSLRH 74
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ + +L +V E+ +L I N F S + + + Q + G+++CH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 133
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
V HRD+K N LL GS +LK+ FG ++ + P V Y APE+L
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP----KDTVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ G DVW+ G ++ L+ PF D ++ Q+ +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
DYV +P R L+S++F DP RI+ + H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YGVV K +GQ +A+K+IR + + ++ + P + A
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 80 FPHKGNLHLVFEFMETDLE----TVIRNTNIFLSPADIKSYMQMTL-KGLAFCHKKW-VL 133
+G++ + E M+T L+ VI P DI + +++ K L H K V+
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL---FGAKQYG 190
HRD+KP+N+LI + GQ+K+ DFG++ + T + Y APE + K Y
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK-TIDAGCKPYMAPERINPELNQKGYS 235
Query: 191 AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKI 224
D+W+ G EL + R P+ + QL ++
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 44/310 (14%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
K++ ++Y+ E LG G +G+V++ ++T + +T K +++ + + +EI +L
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL---VKKEISILNI 57
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIR-NTNIF-LSPADIKSYMQMTLKGLA 125
+ +I+ L ++F L ++FEF+ + L+ R NT+ F L+ +I SY+ + L
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFI-SGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 126 FCHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
F H + H D++P N++ + +K+ +FG AR P F A Y APE +
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-KPGDNFRLLFTAPEYYAPE-V 174
Query: 184 FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
D+W+ G + LL+ PFL ++ +I A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIENIMNA----------- 218
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE 302
EY + F S +A+D + ++ + K+R+TA +AL+H P
Sbjct: 219 ----EYTFDEEA-----FKEISIEAMDFVDRLLVKERKSRMTASEALQH--------PWL 261
Query: 303 PNKLPRPATK 312
K+ R +TK
Sbjct: 262 KQKIERVSTK 271
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 56/307 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+KV D Y E LG G + +V K + TG A IKK + + GV+ + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+L+++ ++I L D + ++ ++ L+ E + LS + S+++ L G
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H K + H D+KP N+++ +KL DFGLA IFG+P+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L I
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANI---- 230
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
++Y D+ E F S+ A D + K+ + + R+T Q+A
Sbjct: 231 --------TSVSY--DFDE----------EFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFS 295
L H + +
Sbjct: 271 LRHPWIT 277
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 18 EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
+VLG+G++G V+ K +G A+K ++ K E +L ++ P ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+L AF +G L+L+ +F+ DL T + +F + D+K Y+ GL H ++
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALGLDHLHSLGII 152
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
+RD+KP N+L+ G +KL DFGL++ +++ Y APE++ + +
Sbjct: 153 YRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV-NRQGHSHSA 211
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
D W+ G + E+L QG + + I A
Sbjct: 212 DWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 56/307 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+KV D Y E LG G + +V K + TG A IKK + + GV+ + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+L+++ ++I L D + ++ ++ L+ E + LS + S+++ L G
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H K + H D+KP N+++ +KL DFGLA IFG+P+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L I +
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITS-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
V Y + F S+ A D + K+ + + R+T Q+A
Sbjct: 233 -----------------VSYDFD-----EEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFS 295
L H + +
Sbjct: 271 LRHPWIT 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 56/303 (18%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
+KV D Y E LG G + +V K + TG A IKK + + GV+ + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
+L+++ ++I L D + ++ ++ L+ E + LS + S+++ L G
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
+ + H K + H D+KP N+++ +KL DFGLA IFG+P+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
+ APE++ + G D+W+ G I LL+ PFL G + + L I
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANI---- 230
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
++Y D+ E F S+ A D + K+ + + R+T Q+A
Sbjct: 231 --------TSVSY--DFDE----------EFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEH 291
L H
Sbjct: 271 LRH 273
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 54/331 (16%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
+ +RY LGEGT+G V + +D G++ VA+K IR +GK +E A EI +LK+
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA----ARLEINVLKK 81
Query: 68 LKSPH------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+K + + D F G++ + FE + + ++ N P +M L
Sbjct: 82 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 141
Query: 122 -KGLAFCHKKWVLHRDMKPNNLLIGS-------------------HGQLKLADFGLARIF 161
L F H+ + H D+KP N+L + + +++ADFG A
Sbjct: 142 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 200
Query: 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
T V R YR PE++ + DVW+ GCI E Q + + L
Sbjct: 201 --DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 222 GKIFAAFGTATPSQWPD------------LAYLPDYVEYQYVA--APPLRSLFPSASDDA 267
+ G PS L + + + +YV PL+S S +
Sbjct: 258 VMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 316
Query: 268 L---DLLSKMFTYDPKARITAQQALEHRYFS 295
+ DL+ +M +DP RIT +AL H +F+
Sbjct: 317 VQLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 54/331 (16%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
+ +RY LGEGT+G V + +D G++ VA+K IR +GK +E A EI +LK+
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA----ARLEINVLKK 72
Query: 68 LKSPH------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+K + + D F G++ + FE + + ++ N P +M L
Sbjct: 73 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 132
Query: 122 -KGLAFCHKKWVLHRDMKPNNLLIGS-------------------HGQLKLADFGLARIF 161
L F H+ + H D+KP N+L + + +++ADFG A
Sbjct: 133 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 191
Query: 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
T V R YR PE++ + DVW+ GCI E Q + + L
Sbjct: 192 --DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 222 GKIFAAFGTATPSQWPD------------LAYLPDYVEYQYVA--APPLRSLFPSASDDA 267
+ G PS L + + + +YV PL+S S +
Sbjct: 249 VMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 307
Query: 268 L---DLLSKMFTYDPKARITAQQALEHRYFS 295
+ DL+ +M +DP RIT +AL H +F+
Sbjct: 308 VQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 139/324 (42%), Gaps = 53/324 (16%)
Query: 18 EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
+VLG+G++G V+ K + Q A+K ++ K E +L E+ P I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+L AF +G L+L+ +F+ DL T + +F + D+K Y+ L H ++
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALALDHLHSLGII 148
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
+RD+KP N+L+ G +KL DFGL++ +++ Y APE++ + +
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSA 207
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIF-AAFGTATPSQWPDLAYLPDYVEYQYVA 252
D W+ G + E+L QG + + I A G +P ++
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG------------MPQFL------ 249
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLP 307
S +A LL +F +P R+ A ++ H +FS+ + NKL
Sbjct: 250 -----------SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST----IDWNKLY 294
Query: 308 R--------PATKRASKASDFNPQ 323
R PAT R F+P+
Sbjct: 295 RREIHPPFKPATGRPEDTFYFDPE 318
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF-TALREIKLLKELKSPHIIELID 78
+G+G++G V T + A+K + K E +E+++++ L+ P ++ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 79 AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
+F + ++ +V + + DL ++ N+ +K ++ + L + + ++HRDM
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQRIIHRDM 141
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGVDV 195
KP+N+L+ HG + + DF +A + + + T + Y APE+ K Y VD
Sbjct: 142 KPDNILLDEHGHVHITDFNIAAMLPR-ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDW 200
Query: 196 WAAGCIFAELL-NRRPF-LQGSSDIDQLGKIFAAFGTATPSQW 236
W+ G ELL RRP+ ++ S+ ++ F PS W
Sbjct: 201 WSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW 243
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 35/235 (14%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
VLG+G +G V KA + + AIKKIR ++K T L E+ LL L +++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVXLLASLNHQYVVRYYA 69
Query: 79 AFPHKGN-------------LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
A+ + N L + E+ E L +I + N+ + + L+ L
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR---------------IFGSPDRRFT 169
++ H + ++HR++KP N+ I +K+ DFGLA+ + GS D T
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-NLT 188
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
+ Y A E+L G Y +D ++ G IF E + PF G ++ L K+
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILKKL 241
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 54/331 (16%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
+ +RY LGEGT+G V + +D G++ VA+K IR +GK +E A EI +LK+
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA----ARLEINVLKK 104
Query: 68 LKSPH------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+K + + D F G++ + FE + + ++ N P +M L
Sbjct: 105 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 164
Query: 122 -KGLAFCHKKWVLHRDMKPNNLLIGS-------------------HGQLKLADFGLARIF 161
L F H+ + H D+KP N+L + + +++ADFG A
Sbjct: 165 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 223
Query: 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
T V R YR PE++ + DVW+ GCI E Q + + L
Sbjct: 224 --DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 222 GKIFAAFGTATPSQWPD------------LAYLPDYVEYQYVA--APPLRSLFPSASDDA 267
+ G PS L + + + +YV PL+S S +
Sbjct: 281 VMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 339
Query: 268 L---DLLSKMFTYDPKARITAQQALEHRYFS 295
+ DL+ +M +DP RIT +AL H +F+
Sbjct: 340 VQLFDLMRRMLEFDPAQRITLAEALLHPFFA 370
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+DRY + +G G +GV D + + VA+K I G E ++ REI + L+
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG---EKIDENVKREIINHRSLRH 74
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ + +L +V E+ +L I N F S + + + Q + G+++ H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYAHA 133
Query: 130 KWVLHRDMKP-NNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
V HRD+K N LL GS +LK+ADFG ++ + P V Y APE+L
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP----KSAVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ G DVW+ G ++ L+ PF D ++ Q+ +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
DYV +P R L+S++F DP RI+ + H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG YG V A++ T + VA+K + + K+ +EI + L ++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINAMLNHENVVKF- 70
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 71 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + +G G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E+M D+ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +K+ADFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 45/296 (15%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
++DRY E+LG G V+ A D + + VA+K +R ++ + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69 KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
P I+ + D A G L ++V E+++ I +T ++P + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
F H+ ++HRD+KP N++I + +K+ DFG+AR T + Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
G A DV++ GC+ E+L P G S
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDS------------------------- 223
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALD-----LLSKMFTYDPKARITAQQALEHR 292
PD V YQ+V P+ PSA + L ++ K +P+ R Q A E R
Sbjct: 224 -PDSVAYQHVREDPIP---PSARHEGLSADLDAVVLKALAKNPENRY--QTAAEMR 273
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + +G G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E+M D+ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +K+ADFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 75
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
N L+G + +K+ADFGL+R+ G F + APE L ++ DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 194
Query: 197 AAGCIFAEL 205
A G + E+
Sbjct: 195 AFGVLLWEI 203
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 75
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ FT A++ + APE L ++ D
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPESL-AYNKFSIKSD 192
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 193 VWAFGVLLWEI 203
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 129/323 (39%), Gaps = 46/323 (14%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
+DRY + +G G +GV D T + VA+K I G ++ REI + L+
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRH 75
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
P+I+ + +L ++ E+ +L I N F S + + + Q L G+++CH
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRF-SEDEARFFFQQLLSGVSYCHS 134
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
+ HRD+K N LL GS +LK+ DFG ++ + P V Y APE+L
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLL 190
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
+ G DVW+ G ++ L+ PF D I +P
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS--------IP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D + S + L+S++F DP RI+ + H +F
Sbjct: 243 DDIR---------------ISPECCHLISRIFVADPATRISIPEIKTHSWFL-------- 279
Query: 304 NKLPRPATKRASKASDFNPQEGP 326
LP ++ S F E P
Sbjct: 280 KNLPADLMNESNTGSQFQEPEQP 302
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
++DRY E+LG G V+ A D + + VA+K +R ++ + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69 KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
P I+ + D A G L ++V E+++ I +T ++P + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
F H+ ++HRD+KP N++I + +K+ DFG+AR T + Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
G A DV++ GC+ E+L P G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 195 VWAFGVLLWEI 205
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YGVV K +GQ +A+K+IR + + ++ + P + A
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 80 FPHKGNLHLVFEFMETDLE----TVIRNTNIFLSPADIKSYMQMTL-KGLAFCHKKW-VL 133
+G++ + E M+T L+ VI P DI + +++ K L H K V+
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL---FGAKQYG 190
HRD+KP+N+LI + GQ+K+ DFG++ + D + Y APE + K Y
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191
Query: 191 AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKI 224
D+W+ G EL + R P+ + QL ++
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 78
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
N L+G + +K+ADFGL+R+ G F + APE L ++ DVW
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 197
Query: 197 AAGCIFAEL 205
A G + E+
Sbjct: 198 AFGVLLWEI 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 195 VWAFGVLLWEI 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LGEG G V A++ T + VA+K + + K+ +EI + K L ++++
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78 DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+ H+ GN+ +F + E R +I + D + + + G+ + H + H
Sbjct: 70 --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
RD+KP NLL+ LK++DFGLA +F +R R +++ Y APELL + +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
VDVW+ G + +L P+ Q S + D+ E +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
P + L LL K+ +P ARIT + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G YG V K + +GQ +A+K+IR ++ + +++ P+I++ A
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNIFLS---PADIKSYMQM-TLKGLAFCHKKW-VLH 134
+G+ + E M T + + L P +I + + T+K L + ++H
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149
Query: 135 RDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELL--FGAKQ-YG 190
RD+KP+N+L+ G +KL DFG++ ++ S + T R Y APE + ++Q Y
Sbjct: 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERIDPSASRQGYD 207
Query: 191 AGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKI 224
DVW+ G EL R P+ + +S DQL ++
Sbjct: 208 VRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV 242
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 112/271 (41%), Gaps = 33/271 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELID 78
LG G+YG V+K + G+ A+K+ + L E+ +++ + P + L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
A+ G L+L E L+ L A + Y++ TL LA H + ++H D+K
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVK 184
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAA 198
P N+ +G G+ KL DFGL G+ + R Y APELL G+ YG DV++
Sbjct: 185 PANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-YMAPELLQGS--YGTAADVFSL 241
Query: 199 GCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRS 258
G E+ G QL + YLP E+ + LRS
Sbjct: 242 GLTILEVACNMELPHGGEGWQQLRQ----------------GYLPP--EFTAGLSSELRS 283
Query: 259 LFPSASDDALDLLSKMFTYDPKARITAQQAL 289
+L M DPK R TA+ L
Sbjct: 284 -----------VLVMMLEPDPKLRATAEALL 303
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
++DRY E+LG G V+ A D + + VA+K +R ++ + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69 KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
P I+ + D A G L ++V E+++ I +T ++P + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQVFARWYRAPE 181
F H+ ++HRD+KP N+LI + +K+ DFG+AR G+ + + Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
G A DV++ GC+ E+L P G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 200 VWAFGVLLWEI 210
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
++DRY E+LG G V+ A D + + VA+K +R ++ + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69 KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
P I+ + D A G L ++V E+++ I +T ++P + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
F H+ ++HRD+KP N++I + +K+ DFG+AR T + Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
G A DV++ GC+ E+L P G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 47/297 (15%)
Query: 14 YLKREVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
+ ++VLG G G +VY+ + + VA+K+I E +F A RE++LL+E + P
Sbjct: 26 FCPKDVLGHGAEGTIVYRGM--FDNRDVAVKRIL----PECFSF-ADREVQLLRESDEHP 78
Query: 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
++I + ++ E L+ + + + + +Q T GLA H
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN 138
Query: 132 VLHRDMKPNNLLI---GSHGQLK--LADFGLARIFGSPDRRFTHQVFA---RWYRAPELL 183
++HRD+KP+N+LI +HG++K ++DFGL + F+ + + APE+L
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198
Query: 184 F--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+ VD+++AGC+F +++ +GS FG + Q L
Sbjct: 199 SEDCKENPTYTVDIFSAGCVFYYVIS-----EGSH----------PFGKSLQRQANIL-- 241
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDAL--DLLSKMFTYDPKARITAQQALEHRYFSS 296
+ A L L P +D + +L+ KM DP+ R +A+ L+H +F S
Sbjct: 242 ---------LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 200 VWAFGVLLWEI 210
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 124/298 (41%), Gaps = 56/298 (18%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHI 73
L + LG G + VV + I TGQ A K ++ ++ + L EI +L+ KS P +
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 74 IELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
I L + + + + L+ E+ + +S D+ ++ L+G+ + H+
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 132 VLHRDMKPNNLLIGS---HGQLKLADFGLAR----------IFGSPDRRFTHQVFARWYR 178
++H D+KP N+L+ S G +K+ DFG++R I G+P+ Y
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE-----------YL 200
Query: 179 APELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
APE+L D+W G I + L + PF+ G +
Sbjct: 201 APEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFV----------------GEDNQETYL 243
Query: 238 DLAYLP-DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
+++ + DY E F S S A D + + +P+ R TA+ L H +
Sbjct: 244 NISQVNVDYSE----------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKL 64
+ K + +RY + LG G VY A DT VAIK I + ++KE RE+
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 65 LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+L +I+ +ID +LV E++E + ++ LS ++ L G+
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR-WYRAPELL 183
H ++HRD+KP N+LI S+ LK+ DFG+A+ T+ V Y +PE
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
G + D+++ G + E+L P G +
Sbjct: 185 KG-EATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
N L+G + +K+ADFGL+R+ G F + APE L ++ DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 201
Query: 197 AAGCIFAEL 205
A G + E+
Sbjct: 202 AFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 195 VWAFGVLLWEI 205
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
D LK + LGEG++ + K + K+ Q A+K I K+ E + +KL + P
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCE--GHP 66
Query: 72 HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I++L + F + + LV E + +L I+ F S + M+ + ++ H
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHF-SETEASYIMRKLVSAVSHMHDV 125
Query: 131 WVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
V+HRD+KP NLL ++K+ DFG AR+ ++ F Y APELL
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQN 184
Query: 188 QYGAGVDVWAAGCIFAELLN-RRPF------LQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
Y D+W+ G I +L+ + PF L +S ++ + KI + W ++
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV- 243
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
S +A DL+ + T DP R+
Sbjct: 244 -----------------------SQEAKDLIQGLLTVDPNKRL 263
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 195 VWAFGVLLWEI 205
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 34/282 (12%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
++ EVLG G + V+ TG+ A+K I+ K + + EI +LK++K +I
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHENI 68
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
+ L D + + +LV + + +L I ++ + D +Q L + + H+ +
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY-TEKDASLVIQQVLSAVKYLHENGI 127
Query: 133 LHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
+HRD+KP NLL + + ++ + DFGL+++ + + Y APE+L K Y
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVL-AQKPY 184
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W+ G I LL P ++ KI + W D+
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI---------- 234
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
S+ A D + + DP R T ++AL H
Sbjct: 235 --------------SESAKDFICHLLEKDPNERYTCEKALSH 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 200 VWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 200 VWAFGVLLWEI 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 81
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 198
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 199 VWAFGVLLWEI 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
++DRY E+LG G V+ A D + + VA+K +R ++ + R E + L
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 69 KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
P I+ + D A G L ++V E+++ I +T ++P + + L
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
F H+ ++HRD+KP N++I + +K+ DFG+AR T + Y +PE
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
G A DV++ GC+ E+L P G S +
Sbjct: 207 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 32/255 (12%)
Query: 61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--------LETVIRNTNIFLSPAD 112
E++++ ++K+ + + + +++++E+ME D + +N F+
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 113 IKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171
IK ++ L ++ H +K + HRD+KP+N+L+ +G++KL+DFG + D++
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM--VDKKIKGS 210
Query: 172 VFARWYRAPELLFGAKQY-GAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIFAAFG 229
+ PE Y GA VD+W+ G C++ N PF S ++ I
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI----- 265
Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL-----DLLSKMFTYDPKARIT 284
+ ++ Y D + Y PL + + S++ L D L +P RIT
Sbjct: 266 -----RTKNIEYPLDRNHFLY----PLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT 316
Query: 285 AQQALEHRYFSSAPL 299
++ AL+H + + +
Sbjct: 317 SEDALKHEWLADTNI 331
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 79
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 196
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 197 VWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 90
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 207
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 208 VWAFGVLLWEI 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 195 VWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 79
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 196
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 197 VWAFGVLLWEI 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 195 VWAFGVLLWEI 205
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 18 EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
+VLG+G++G V+ K + Q A+K ++ K E +L E+ P I+
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+L AF +G L+L+ +F+ DL T + +F + D+K Y+ L H ++
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALALDHLHSLGII 149
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
+RD+KP N+L+ G +KL DFGL++ +++ Y APE++ + +
Sbjct: 150 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSA 208
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
D W+ G + E+L QG + + I A
Sbjct: 209 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 284
Query: 80 FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HR++
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL 344
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 401
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 402 VWAFGVLLWEI 412
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 18 EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
+VLG+G++G V+ K + Q A+K ++ K E +L E+ P I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
+L AF +G L+L+ +F+ DL T + +F + D+K Y+ L H ++
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALALDHLHSLGII 148
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
+RD+KP N+L+ G +KL DFGL++ +++ Y APE++ + +
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSA 207
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
D W+ G + E+L QG + + I A
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
++DRY E+LG G V+ A D + + VA+K +R ++ + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69 KSPHIIELI---DAFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
P I+ + +A G L ++V E+++ I +T ++P + + L
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
F H+ ++HRD+KP N++I + +K+ DFG+AR T + Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
G A DV++ GC+ E+L P G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 78
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESL-AYNKFSIKSD 195
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 196 VWAFGVLLWEI 206
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +G VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 75
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
N L+G + +K+ADFGL+R+ G F + APE L ++ DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 194
Query: 197 AAGCIFAEL 205
A G + E+
Sbjct: 195 AFGVLLWEI 203
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 79
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HRD+
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESL-AYNKFSIKSD 196
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 197 VWAFGVLLWEI 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 323
Query: 80 FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HR++
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 440
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 441 VWAFGVLLWEI 451
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G GT G V+K KTG +A+K++R KE + +LK P+I++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMK 138
F ++ + E M T E + + + + +K L + +K V+HRD+K
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK 152
Query: 139 PNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLF----GAKQYGAGV 193
P+N+L+ GQ+KL DFG++ R+ D+ Y APE + Y
Sbjct: 153 PSNILLDERGQIKLCDFGISGRLV--DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA 210
Query: 194 DVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIF 225
DVW+ G EL + P+ +D + L K+
Sbjct: 211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVL 243
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY+ + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 281
Query: 80 FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ +++ EFM +L +R N A + YM + + + KK +HR++
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 341
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L ++ D
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 398
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 399 VWAFGVLLWEI 409
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
D +L VLG G +G V+ TG+ A KK+ + K+ + A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
I+ L AF K +L LV M D+ I N + F P I Y + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
H++ +++RD+KP N+L+ G ++++D GLA + + + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
++Y VD +A G E++ R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
D +L VLG G +G V+ TG+ A KK+ + K+ + A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
I+ L AF K +L LV M D+ I N + F P I Y + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
H++ +++RD+KP N+L+ G ++++D GLA + + + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
++Y VD +A G E++ R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
D +L VLG G +G V+ TG+ A KK+ + K+ + A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
I+ L AF K +L LV M D+ I N + F P I Y + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
H++ +++RD+KP N+L+ G ++++D GLA + + + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
++Y VD +A G E++ R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
D +L VLG G +G V+ TG+ A KK+ + K+ + A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71 PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
I+ L AF K +L LV M D+ I N + F P I Y + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
H++ +++RD+KP N+L+ G ++++D GLA + + + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
++Y VD +A G E++ R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 13 RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLL 65
R+LKR LGEG +G V Y TG+ VA+K + K + G N A +EI++L
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL---KPESGGNHIADLKKEIEIL 77
Query: 66 KELKSPHIIELIDAFPHKGN--LHLVFEFMETDL--ETVIRNTNIFLSPADIKSYMQMTL 121
+ L +I++ G + L+ EF+ + E + +N N +K +Q+
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC- 136
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFAR 175
KG+ + + +HRD+ N+L+ S Q+K+ DFGL + + T + VF
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF-- 194
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
WY APE L +K Y A DVW+ G ELL SD + G T Q
Sbjct: 195 WY-APECLMQSKFYIAS-DVWSFGVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQ 246
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
+ E + + P P+ D+ L+ K + + P R + Q +E
Sbjct: 247 MTVTRLVNTLKEGKRLPCP------PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 141/354 (39%), Gaps = 67/354 (18%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
VLG+G++G V + T + A+K ++ + Q + V T + + L K P + +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ V E++ DL I+ F P + ++ + GL F K +++R
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI-GLFFLQSKGIIYR 145
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
D+K +N+++ S G +K+ADFG+ + G+PD Y APE++
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD-----------YIAPEII- 193
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
+ YG VD WA G + E+L + +G D D+L + A P
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAYPK---------- 242
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPL 299
S S +A+ + + T P R+ + EH +F
Sbjct: 243 -----------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 285
Query: 300 ------PTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEG 347
+P P+ + A F + P VL PP + D+ FEG
Sbjct: 286 EKLERKEIQPPYKPKACGRNAENFDRFFTRH-PPVLXPPDQEVIRNIDQSEFEG 338
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
D++ + + LG G++G V +TG A+K K ++ K KE + T L E ++L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE-IEHT-LNEKRILQAV 98
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P +++L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEYL 157
Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRA 179
H +++RD+KP NL+I G +K+ DFGLA+ + G+P+ Y A
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE-----------YLA 206
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAEL 205
PE++ +K Y VD WA G + E+
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 13 RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLL 65
R+LKR LGEG +G V Y TG+ VA+K + K + G N A +EI++L
Sbjct: 9 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL---KPESGGNHIADLKKEIEIL 65
Query: 66 KELKSPHIIELIDAFPHKGN--LHLVFEFMETDL--ETVIRNTNIFLSPADIKSYMQMTL 121
+ L +I++ G + L+ EF+ + E + +N N +K +Q+
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC- 124
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFAR 175
KG+ + + +HRD+ N+L+ S Q+K+ DFGL + + T + VF
Sbjct: 125 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF-- 182
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
WY APE L +K Y A DVW+ G ELL SD + G T Q
Sbjct: 183 WY-APECLMQSKFYIAS-DVWSFGVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQ 234
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
+ E + + P P+ D+ L+ K + + P R + Q +E
Sbjct: 235 MTVTRLVNTLKEGKRLPCP------PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 142/353 (40%), Gaps = 65/353 (18%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
VLG+G++G V + T + A+K ++ + Q + V T + + L K P + +L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ V E++ DL I+ F P + ++ + GL F K +++R
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI-GLFFLQSKGIIYR 466
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
D+K +N+++ S G +K+ADFG+ + G+PD Y APE++
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD-----------YIAPEII- 514
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
+ YG VD WA G + E+L + +G D D+L + A P
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAYPK---------- 563
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPL 299
S S +A+ + + T P R+ + EH +F
Sbjct: 564 -----------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 606
Query: 300 PTEPNKLPRP-----ATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEG 347
K +P A+ R ++ D P VL PP + D+ FEG
Sbjct: 607 EKLERKEIQPPYKPKASGRNAENFDRFFTRHPPVLXPPDQEVIRNIDQSEFEG 659
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + +G G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +K+ADFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G++G V++ D +TG A+KK+RL E+ L SP I+ L A
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL-------EVFRAEELMACAGLTSPRIVPLYGA 153
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
+++ E +E L +++ P D Y+ L+GL + H + +LH D+
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCL--PEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
K +N+L+ S G L DFG A PD + + + APE++ G +
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCL-QPDGLGKSLLTGDYIPGTETHMAPEVVLG-RSCD 269
Query: 191 AGVDVWAAGCIFAELLN 207
A VDVW++ C+ +LN
Sbjct: 270 AKVDVWSSCCMMLHMLN 286
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 27/202 (13%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
VLG+G++G V A +TG A+K ++ + Q + V T + L P + +L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L V EF+ DL I+ + F A + Y + L F H K +++R
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF-DEARARFYAAEIISALMFLHDKGIIYR 148
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
D+K +N+L+ G KLADFG+ + G+PD Y APE+L
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD-----------YIAPEIL- 196
Query: 185 GAKQYGAGVDVWAAGCIFAELL 206
YG VD WA G + E+L
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEML 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G++G V++ D +TG A+KK+RL + E+ L SP I+ L A
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGA 132
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
+++ E +E L +I+ P D Y+ L+GL + H + +LH D+
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCL--PEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
K +N+L+ S G + L DFG A PD + + + APE++ G K
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 248
Query: 191 AGVDVWAAGCIFAELLN 207
A VD+W++ C+ +LN
Sbjct: 249 AKVDIWSSCCMMLHMLN 265
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 66
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFARWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ F + +F WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF--WY 184
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 185 -APESLTESK-FSVASDVWSFGVVLYELF 211
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G++G V++ D +TG A+KK+RL E+ L SP I+ L A
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRL-------EVFRAEELMACAGLTSPRIVPLYGA 134
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
+++ E +E L +++ P D Y+ L+GL + H + +LH D+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCL--PEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
K +N+L+ S G L DFG A PD + + + APE++ G +
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCL-QPDGLGKDLLTGDYIPGTETHMAPEVVLG-RSCD 250
Query: 191 AGVDVWAAGCIFAELLN 207
A VDVW++ C+ +LN
Sbjct: 251 AKVDVWSSCCMMLHMLN 267
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 22/229 (9%)
Query: 1 MAEVDLS--KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFT 57
+ E+DLS + A + E++G GTYG VYK KTGQ AIK + + G ++E +
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK-- 68
Query: 58 ALREIKLLKELKSP-HIIELIDAFPHKG------NLHLVFEFMET-DLETVIRNTNIFLS 109
+EI +LK+ +I AF K L LV EF + +I+NT
Sbjct: 69 --QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 110 PADIKSYM-QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRR 167
+ +Y+ + L+GL+ H+ V+HRD+K N+L+ + ++KL DFG+ A++ + RR
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186
Query: 168 FTHQVFARWYRAPELLFGAKQ----YGAGVDVWAAGCIFAELLNRRPFL 212
T + ++ APE++ + Y D+W+ G E+ P L
Sbjct: 187 NTF-IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 17 REVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHI 73
++V+GEG +G V KA K G AIK+++ + + +F E+ L K P+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNI 78
Query: 74 IELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYM 117
I L+ A H+G L+L E+ +ETD I N T LS + +
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
+G+ + +K +HRD+ N+L+G + K+ADFGL+R ++ ++ RW
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 198
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
L + Y DVW+ G + E+++
Sbjct: 199 AIESLNYSV--YTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 17 REVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHI 73
++V+GEG +G V KA K G AIK+++ + + +F E+ L K P+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNI 88
Query: 74 IELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYM 117
I L+ A H+G L+L E+ +ETD I N T LS + +
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
+G+ + +K +HRD+ N+L+G + K+ADFGL+R ++ ++ RW
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 208
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
L + Y DVW+ G + E+++
Sbjct: 209 AIESLNYSV--YTTNSDVWSYGVLLWEIVS 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 218
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
D+WA GCI +L+ P + ++ KI +EY + AA
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------------LEYDFPAA 259
Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
FP A DL+ K+ D R+ ++
Sbjct: 260 -----FFPKAR----DLVEKLLVLDATKRLGCEE 284
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
D++ + + LG G++G V +TG A+K K ++ K KE + T L E ++L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE-IEHT-LNEKRILQAV 98
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
P +++L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEYL 157
Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRA 179
H +++RD+KP NL+I G +++ DFGLA+ + G+P+ Y A
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE-----------YLA 206
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAEL 205
PE++ +K Y VD WA G + E+
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E ME DL I L +S+ L+ + CH
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 133
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 192 GRSAAVWSLGILLYDMV 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 118/238 (49%), Gaps = 17/238 (7%)
Query: 16 KREVLGEGTYGVVYKA-IDTKTGQT---VAIKKIRLG-KQKEGVNFTALREIKLLKELKS 70
+++V+G G +G VYK + T +G+ VAIK ++ G +K+ V+F L E ++ +
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF--LGEAGIMGQFSH 105
Query: 71 PHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
+II L + ++ E+ME L+ +R + S + ++ G+ +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFG 185
+HRD+ N+L+ S+ K++DFGL+R+ P+ +T ++ RW APE +
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TAPEAI-S 223
Query: 186 AKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+++ + DVW+ G + E++ RP+ + S+ + + I F TP P Y
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIY 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLK 66
A+ Y +V+G G +G V + + K Q V + K + K+ + F R+I
Sbjct: 74 AEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
SP +++L AF L++V E+M DL ++ N ++ A K Y + L
Sbjct: 133 --NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWA--KFYTAEVVLALD 188
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR------------IFGSPDRRFTHQVF 173
H ++HRD+KP+N+L+ HG LKLADFG G+PD
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD-------- 240
Query: 174 ARWYRAPELL---FGAKQYGAGVDVWAAGC-IFAELLNRRPFLQGS 215
Y +PE+L G YG D W+ G +F L+ PF S
Sbjct: 241 ---YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 20 LGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK L+ +I++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVK 78
Query: 76 LIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
G NL L+ EF+ L ++ + + Y KG+ + K
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWYRAPELLFGA 186
+HRD+ N+L+ + ++K+ DFGL ++ P + +V WY APE L +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY-APESLTES 195
Query: 187 KQYGAGVDVWAAGCIFAELL 206
K + DVW+ G + EL
Sbjct: 196 K-FSVASDVWSFGVVLYELF 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKK------IRLGKQKEGVNFTALREIKLLKELKSPHI 73
LG G++G V+ G+ A+K +RL KQ E N L +L + P I
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-KQVEHTNDERL----MLSIVTHPFI 68
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I + F + ++ +++E +L +++R + F +P K Y L + H K +
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV-AKFYAAEVCLALEYLHSKDI 127
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRAPELLF 184
++RD+KP N+L+ +G +K+ DFG A+ + G+PD Y APE++
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD-----------YIAPEVV- 175
Query: 185 GAKQYGAGVDVWAAGCIFAELL 206
K Y +D W+ G + E+L
Sbjct: 176 STKPYNKSIDWWSFGILIYEML 197
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 127/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 64 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 181
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV A Y PE + +++ G
Sbjct: 182 KPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 292
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 293 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 331
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 332 NQMAKGTTEE 341
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G V++ D +TG A+KK+RL + E+ L SP I+ L A
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGA 118
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
+++ E +E L +I+ P D Y+ L+GL + H + +LH D+
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCL--PEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
K +N+L+ S G + L DFG A PD + + + APE++ G K
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 234
Query: 191 AGVDVWAAGCIFAELLN 207
A VD+W++ C+ +LN
Sbjct: 235 AKVDIWSSCCMMLHMLN 251
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G V++ D +TG A+KK+RL + E+ L SP I+ L A
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGA 134
Query: 80 FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
+++ E +E L +I+ P D Y+ L+GL + H + +LH D+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCL--PEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
K +N+L+ S G + L DFG A PD + + + APE++ G K
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 250
Query: 191 AGVDVWAAGCIFAELLN 207
A VD+W++ C+ +LN
Sbjct: 251 AKVDIWSSCCMMLHMLN 267
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 90
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 149
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 198
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 199 APEIIL-SKGYNKAVDWWALGVLIYEM 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 69
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 187
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 188 -APESLTESK-FSVASDVWSFGVVLYELF 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 14 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 71
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 189
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 190 -APESLTESK-FSVASDVWSFGVVLYELF 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 12 DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK LG+G +G V Y + TG VA+K+++ + +F REI++LK
Sbjct: 9 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 66
Query: 67 ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
L S I++ + P + +L LV E++ + L ++ L + + Y KG
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRA 179
+ + + +HRD+ N+L+ S +K+ADFGLA++ + Q WY A
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 185
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
PE L + DVW+ G + EL
Sbjct: 186 PESL-SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 12 DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK LG+G +G V Y + TG VA+K+++ + +F REI++LK
Sbjct: 10 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 67
Query: 67 ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
L S I++ + P + +L LV E++ + L ++ L + + Y KG
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRA 179
+ + + +HRD+ N+L+ S +K+ADFGLA++ + Q WY A
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 186
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
PE L + DVW+ G + EL
Sbjct: 187 PESL-SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 16 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 73
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 191
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 192 -APESLTESK-FSVASDVWSFGVVLYELF 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 13 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 70
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 188
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 189 -APESLTESK-FSVASDVWSFGVVLYELF 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 97
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 215
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 216 -APESLTESK-FSVASDVWSFGVVLYELF 242
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +K+ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G YG VY + K TVA+K ++ E F L+E ++KE+K P++++L+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 96
Query: 80 FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
+ ++V E+M +L +R N A + YM + + + KK +HRD+
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDL 156
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
N L+G + +K+ADFGL+R+ +T A++ + APE L + D
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESL-AYNTFSIKSD 213
Query: 195 VWAAGCIFAEL 205
VWA G + E+
Sbjct: 214 VWAFGVLLWEI 224
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 7 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 64
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 182
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 183 -APESLTESK-FSVASDVWSFGVVLYELF 209
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 15 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 72
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 190
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 191 -APESLTESK-FSVASDVWSFGVVLYELF 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 66
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 184
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 185 -APESLTESK-FSVASDVWSFGVVLYELF 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 66
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 184
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 185 -APESLTESK-FSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 8 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 65
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 183
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 184 -APESLTESK-FSVASDVWSFGVVLYELF 210
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G +G+V+ + VAIK IR G E +F + E +++ +L P +++L
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 70
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LVFEFME L +R + + +G+A+ + V+HRD+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 130
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+G + +K++DFG+ R D ++T ++ + +PE +F +Y + DV
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 187
Query: 196 WAAGCIFAELLN 207
W+ G + E+ +
Sbjct: 188 WSFGVLMWEVFS 199
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 90
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 149
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 198
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 199 APEIIL-SKGYNKAVDWWALGVLIYEM 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 118
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 177
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 226
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 227 APEIIL-SKGYNKAVDWWALGVLIYEM 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHT-LNEKRILQA 83
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 142
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----------YL 191
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 192 APEIIL-SKGYNKAVDWWALGVLIYEM 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 12 DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK LG+G +G V Y + TG VA+K+++ + +F REI++LK
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 79
Query: 67 ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
L S I++ + P + +L LV E++ + L ++ L + + Y KG
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRA 179
+ + + +HRD+ N+L+ S +K+ADFGLA++ + Q WY A
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 198
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
PE L + DVW+ G + EL
Sbjct: 199 PESL-SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G +G+V+ + VAIK IR G E +F + E +++ +L P +++L
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 68
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LVFEFME L +R + + +G+A+ + V+HRD+
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 128
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+G + +K++DFG+ R D ++T ++ + +PE +F +Y + DV
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 185
Query: 196 WAAGCIFAELLN 207
W+ G + E+ +
Sbjct: 186 WSFGVLMWEVFS 197
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +K+ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +K+ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA 226
D+WA GCI +L+ P + ++ G IFA
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE----GLIFA 244
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G +G+V+ + VAIK IR G E +F + E +++ +L P +++L
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 73
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LVFEFME L +R + + +G+A+ + V+HRD+
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 133
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+G + +K++DFG+ R D ++T ++ + +PE +F +Y + DV
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 190
Query: 196 WAAGCIFAELLN 207
W+ G + E+ +
Sbjct: 191 WSFGVLMWEVFS 202
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 84
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 202
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 203 -APESLTESK-FSVASDVWSFGVVLYELF 229
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 137/320 (42%), Gaps = 30/320 (9%)
Query: 6 LSKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
S + D Y L+ +VLGEG + V I+ T Q A+K I KQ + RE+++
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFREVEM 63
Query: 65 LKELKSP-HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L + + +++ELI+ F + +LVFE M + + + +Q
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLA---RIFGSPDRRFTHQVF---- 173
L F H K + HRD+KP N+L Q +K+ DFGL ++ G T ++
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCG 183
Query: 174 ARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFG 229
+ Y APE++ A Y D+W+ G I LL+ P G D G
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD----CGWDRG 239
Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289
A P+ L +Y++ P + + S A DL+SK+ D K R++A Q L
Sbjct: 240 EACPACQNMLFESIQEGKYEF----PDKD-WAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 290 EHRYFSSAPLPTEPNKLPRP 309
+H + N LP P
Sbjct: 295 QHPWVQGC---APENTLPTP 311
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 220
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 221 DLWALGCIIYQLVAGLP 237
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 10 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 67
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFARWY 177
+ + K +HR++ N+L+ + ++K+ DFGL ++ + + +F WY
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF--WY 185
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 186 -APESLTESK-FSVASDVWSFGVVLYELF 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 84
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 202
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 203 -APESLTESK-FSVASDVWSFGVVLYELF 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSAXKSS 215
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA 226
D+WA GCI +L+ P + ++ G IFA
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE----GLIFA 244
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL-TEKSACKSS 216
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 217 DLWALGCIIYQLVAGLP 233
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIE 75
R VL EG + VY+A D +G+ A+K RL +E N ++E+ +K+L P+I++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 76 LIDAFP--------HKGNLHLVFEFMETDLETVIRNTNIF--LSPADIKSYMQMTLKGLA 125
A + L+ E + L ++ LS + T + +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 126 FCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFAR------- 175
H++ ++HRD+K NLL+ + G +KL DFG A I PD ++ Q A
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 176 ----WYRAPEL--LFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGS 215
YR PE+ L+ G D+WA GCI L R+ PF G+
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 135 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 193
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 194 DLWALGCIIYQLVAGLP 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G +G+V+ + VAIK IR G E +F + E +++ +L P +++L
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 70
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LVFEFME L +R + + +G+A+ + V+HRD+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLA 130
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+G + +K++DFG+ R D ++T ++ + +PE +F +Y + DV
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 187
Query: 196 WAAGCIFAELLN 207
W+ G + E+ +
Sbjct: 188 WSFGVLMWEVFS 199
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 134 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 192
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 193 DLWALGCIIYQLVAGLP 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 28/209 (13%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-- 75
E++G G +G V+KA G+T IK+++ +K A RE+K L +L +I+
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK------AEREVKALAKLDHVNIVHYN 70
Query: 76 -LIDAFPHK-------------GNLHLVFEFMET-DLETVI--RNTNIFLSPADIKSYMQ 118
D F + L + EF + LE I R ++ + Q
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
+T KG+ + H K +++RD+KP+N+ + Q+K+ DFGL + +R + R Y
Sbjct: 131 IT-KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLR-YM 188
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
+PE + ++ YG VD++A G I AELL+
Sbjct: 189 SPEQI-SSQDYGKEVDLYALGLILAELLH 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 17 REVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHI 73
++V+GEG +G V KA K G AIK+++ + + +F E+ L K P+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNI 85
Query: 74 IELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYM 117
I L+ A H+G L+L E+ +ETD I N T LS + +
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
+G+ + +K +HR++ N+L+G + K+ADFGL+R ++ ++ RW
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 205
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
L + Y DVW+ G + E+++
Sbjct: 206 AIESLNYSV--YTTNSDVWSYGVLLWEIVS 233
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 12 DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK LG+G +G V Y + TG VA+K+++ + +F REI++LK
Sbjct: 6 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 63
Query: 67 ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
L S I++ + P + L LV E++ + L ++ L + + Y KG
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYRA 179
+ + + +HRD+ N+L+ S +K+ADFGLA++ R Q WY A
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-A 182
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
PE L + DVW+ G + EL
Sbjct: 183 PESL-SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + LG G++G V +TG A+K L KQK + + T L E ++ +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRIQQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +K+ADFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K +R + K+ V T + E ++L+ + P
Sbjct: 9 YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+ L AF L V E+ +L + +F + + Y + L + H +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
V++RD+K NL++ G +K+ DFGL + S Y APE+L YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W G + E++ R PF + D ++L ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
+ +R FP + S +A LL+ + DPK R+ A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 132 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 190
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 191 DLWALGCIIYQLVAGLP 207
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K +R + K+ V T + E ++L+ + P
Sbjct: 12 YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 68
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+ L AF L V E+ +L + +F + + Y + L + H +
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 127
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
V++RD+K NL++ G +K+ DFGL + S Y APE+L YG
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-EDNDYG 186
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W G + E++ R PF + D ++L ++
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 218
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
+ +R FP + S +A LL+ + DPK R+ A++ +EHR+F S
Sbjct: 219 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 269
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K +R + K+ V T + E ++L+ + P
Sbjct: 9 YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+ L AF L V E+ +L + +F + + Y + L + H +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
V++RD+K NL++ G +K+ DFGL + S Y APE+L YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W G + E++ R PF + D ++L ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
+ +R FP + S +A LL+ + DPK R+ A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 216
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 217 DLWALGCIIYQLVAGLP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 214 DLWALGCIIYQLVAGLP 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 214 DLWALGCIIYQLVAGLP 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 216 DLWALGCIIYQLVAGLP 232
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 64 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 181
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV Y PE + +++ G
Sbjct: 182 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 292
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 293 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 331
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 332 NQMAKGTTEE 341
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 216 DLWALGCIIYQLVAGLP 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 118
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 177
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 226
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 227 APEIIL-SKGYNKAVDWWALGVLIYEM 252
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 133 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 191
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 192 DLWALGCIIYQLVAGLP 208
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12 DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
+R+LK + LG+G +G V Y + TG+ VA+KK++ ++ +F REI++LK
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 69
Query: 67 ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L+ +I++ G NL L+ E++ L ++ + + Y KG
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
+ + K +HRD+ N+L+ + ++K+ DFGL ++ P + +V WY
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 187
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
APE L +K + DVW+ G + EL
Sbjct: 188 -APESLTESK-FSVASDVWSFGVVLYELF 214
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 64 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 181
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV Y PE + +++ G
Sbjct: 182 KPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 292
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 293 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 331
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 332 NQMAKGTTEE 341
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 92
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 151
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 200
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 201 APEIIL-SKGYNKAVDWWALGVLIYEM 226
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K +R + K+ V T + E ++L+ + P
Sbjct: 14 YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 70
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+ L AF L V E+ +L + +F + + Y + L + H +
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 129
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
V++RD+K NL++ G +K+ DFGL + S Y APE+L YG
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 188
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W G + E++ R PF + D ++L ++
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 220
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
+ +R FP + S +A LL+ + DPK R+ A++ +EHR+F S
Sbjct: 221 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 271
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA--RWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ ++ F Y +PELL K
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 214 DLWALGCIIYQLVAGLP 230
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K +R + K+ V T + E ++L+ + P
Sbjct: 9 YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+ L AF L V E+ +L + +F + + Y + L + H +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
V++RD+K NL++ G +K+ DFGL + S Y APE+L YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W G + E++ R PF + D ++L ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
+ +R FP + S +A LL+ + DPK R+ A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K +R + K+ V T + E ++L+ + P
Sbjct: 9 YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+ L AF L V E+ +L + +F + + Y + L + H +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
V++RD+K NL++ G +K+ DFGL + S Y APE+L YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W G + E++ R PF + D ++L ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
+ +R FP + S +A LL+ + DPK R+ A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 216 DLWALGCIIYQLVAGLP 232
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 134/334 (40%), Gaps = 76/334 (22%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
+Y + +G+G+YGVV AI+ +T AIK + K ++ +N + E++L+K+L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ-INPKDVERIKTEVRLMKKL 85
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM---------------------------------ET 95
P+I L + + + + LV E E
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 96 DLETVIRNTNIFLSPAD-------IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG 148
+ E + + + F D I + M+ L + H + + HRD+KP N L ++
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 149 --QLKLADFGLARIFGSPDR----RFTHQVFARWYRAPELLFGAKQ-YGAGVDVWAAGCI 201
++KL DFGL++ F + T + ++ APE+L + YG D W+AG +
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 202 FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP 261
LL G +D D + ++ + P+ Y PL
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQV---LNKKLCFENPN-----------YNVLSPL----- 306
Query: 262 SASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
A DLLS + + R A +AL+H + S
Sbjct: 307 -----ARDLLSNLLNRNVDERFDAMRALQHPWIS 335
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K +R + K+ V T + E ++L+ + P
Sbjct: 9 YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+ L AF L V E+ +L + +F + + Y + L + H +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
V++RD+K NL++ G +K+ DFGL + S Y APE+L YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
VD W G + E++ R PF + D ++L ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
+ +R FP + S +A LL+ + DPK R+ A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G +G+V+ + VAIK I+ G E +F + E +++ +L P +++L
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSED-DF--IEEAEVMMKLSHPKLVQLYGV 90
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LVFEFME L +R + + +G+A+ + V+HRD+
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 150
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+G + +K++DFG+ R D ++T ++ + +PE +F +Y + DV
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 207
Query: 196 WAAGCIFAELLN 207
W+ G + E+ +
Sbjct: 208 WSFGVLMWEVFS 219
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P + +L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +K+ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 27/222 (12%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-------SPH 72
LG G YGVV K +GQ A+K+IR + + +LL +L P
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIR-------ATVNSQEQKRLLXDLDISXRTVDCPF 94
Query: 73 IIELIDAFPHKGNLHLVFEFMETDLE----TVIRNTNIFLSPADIKSYMQMTL-KGLAFC 127
+ A +G++ + E +T L+ VI P DI + +++ K L
Sbjct: 95 TVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHL 152
Query: 128 HKKW-VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL--- 183
H K V+HRD+KP+N+LI + GQ+K DFG++ + D + Y APE +
Sbjct: 153 HSKLSVIHRDVKPSNVLINALGQVKXCDFGISG-YLVDDVAKDIDAGCKPYXAPERINPE 211
Query: 184 FGAKQYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKI 224
K Y D+W+ G EL + R P+ + QL ++
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 118
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 177
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE-----------YL 226
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 227 APEIIL-SKGYNKAVDWWALGVLIYEM 252
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 197
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 198 DLWALGCIIYQLVAGLP 214
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77 IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + L IR F + Y + L + H K ++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL-TEKSASKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 216 DLWALGCIIYQLVAGLP 232
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+ LG G +GVV++A + AIK+IRL +E +RE+K L +L+ P I+
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRL-PNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 78 DAFPHKGN------------LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK--- 122
+A+ K L++ + + N + + + + L+
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR------------RFTH 170
+ F H K ++HRD+KP+N+ +K+ DFGL + R T
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
QV + Y +PE + G Y VD+++ G I ELL
Sbjct: 190 QVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELL 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 36 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 153
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV Y PE + +++ G
Sbjct: 154 KPANFLIVD-GMLKLIDFGIANQM-QPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 264
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 265 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 303
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 304 NQMAKGTTEE 313
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 84
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 143
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 193 APEIIL-SKGYNKAVDWWALGVLIYEM 218
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL-TEKSACKSS 212
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 213 DLWALGCIIYQLVAGLP 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ V A + T + AIK + + KE RE ++ L P ++L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 212
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 213 DLWALGCIIYQLVAGLP 229
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P + +L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +K+ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 123/306 (40%), Gaps = 35/306 (11%)
Query: 6 LSKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
L K D Y L E+LGEG Y V A+ + G+ A+K I KQ RE++
Sbjct: 6 LPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE--KQAGHSRSRVFREVET 63
Query: 65 LKELK-SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L + + + +I+ELI+ F +LVFE ++ + + ++
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDR-------RFTHQVF 173
L F H K + HRD+KP N+L S + +K+ DF L + T
Sbjct: 124 LDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 174 ARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID---QLGKIFA 226
+ Y APE++ A Y D+W+ G + +L+ P G D G++
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCR 243
Query: 227 AFGTATPSQWPDLAY-LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285
+ Y PD + S +A DL+SK+ D K R++A
Sbjct: 244 VCQNKLFESIQEGKYEFPD-------------KDWAHISSEAKDLISKLLVRDAKQRLSA 290
Query: 286 QQALEH 291
Q L+H
Sbjct: 291 AQVLQH 296
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V +TG A+K L KQK + + T L E ++L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P + +L +F NL++V E+ ++ + +R F P + Y + +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +K+ DFG A+ + G+P+ Y
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 20 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 79 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV Y PE + +++ G
Sbjct: 138 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 195
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 196 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 248
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 249 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 287
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 288 NQMAKGTTEE 297
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 17 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 134
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV Y PE + +++ G
Sbjct: 135 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 245
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 246 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 284
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 285 NQMAKGTTEE 294
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 36 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 153
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV Y PE + +++ G
Sbjct: 154 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 264
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 265 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 303
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 304 NQMAKGTTEE 313
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
LG+G + ++ D T + A + K L K Q+E ++ EI + + L H++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 84
Query: 75 ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
F + +V E + L+ + + Y++ + G + H+ V+H
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
RD+K NL + ++K+ DFGLA R Y APE+L K + VD
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVD 203
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
VW+ GCI LL +P + S + +I +++ +P ++
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------KKNEYS----IPKHIN------- 245
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
P A+ L+ KM DP AR T + L +F+S +P
Sbjct: 246 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NL+I G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIII-SKGYNKAVDWWALGVLIYEM 231
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
+G G V++ ++ K Q AIK + L + + EI L +L+ S II L
Sbjct: 16 IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
D +++V E DL + ++ + P + KSY + L+ + H+ ++H D+
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 133
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
KP N LI G LKL DFG+A PD QV Y PE + +++ G
Sbjct: 134 KPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 191
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
DVW+ GCI + + PF Q I+Q+ K+ A ++PD+
Sbjct: 192 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 244
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
D D+L DPK RI+ + L H Y P
Sbjct: 245 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 283
Query: 304 NKLPRPATKR 313
N++ + T+
Sbjct: 284 NQMAKGTTEE 293
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
DL K D Y +V+G G +G V T + A+K K + K+ + F R+
Sbjct: 63 DLRMKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMT 120
I SP +++L AF L++V E+M DL ++ N ++ A + Y
Sbjct: 122 IMAFA--NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA--RFYTAEV 177
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF---------GLARI---FGSPDRRF 168
+ L H +HRD+KP+N+L+ G LKLADF G+ R G+PD
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD--- 234
Query: 169 THQVFARWYRAPELL---FGAKQYGAGVDVWAAGCIFAELL 206
Y +PE+L G YG D W+ G E+L
Sbjct: 235 --------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 134
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 193 GRSAAVWSLGILLYDMV 209
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 148
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 207 GRSAAVWSLGILLYDMV 223
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 149
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 208 GRSAAVWSLGILLYDMV 224
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
DL K D Y +V+G G +G V T + A+K K + K+ + F R+
Sbjct: 68 DLRMKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMT 120
I SP +++L AF L++V E+M DL ++ N ++ A + Y
Sbjct: 127 IMAFA--NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA--RFYTAEV 182
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRA 179
+ L H +HRD+KP+N+L+ G LKLADFG R V Y +
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS 242
Query: 180 PELL---FGAKQYGAGVDVWAAGCIFAELL 206
PE+L G YG D W+ G E+L
Sbjct: 243 PEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 149
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 208 GRSAAVWSLGILLYDMV 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIR------LGKQKEGVNFTALREIKLLKELKSP 71
E++G G +G VY+A G VA+K R + + E V +E KL LK P
Sbjct: 13 EIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVR----QEAKLFAMLKHP 66
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADI-KSYMQMTLKGLAFCHK 129
+II L + NL LV EF L V+ I P DI ++ +G+ + H
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI---PPDILVNWAVQIARGMNYLHD 123
Query: 130 KW---VLHRDMKPNNLLI--------GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
+ ++HRD+K +N+LI S+ LK+ DFGLAR + + +A +
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA--WM 181
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
APE++ A + G DVW+ G + ELL +G ID L A+G A
Sbjct: 182 APEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRG---IDGLA---VAYGVA 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
LG+G + ++ D T + A + K L K Q+E ++ EI + + L H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 80
Query: 75 ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
F + +V E + L+ + + Y++ + G + H+ V+H
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
RD+K NL + ++K+ DFGLA R Y APE+L K + VD
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVD 199
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
VW+ GCI LL +P + S L + + S +P ++
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSC----LKETYLRIKKNEYS-------IPKHIN------- 241
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
P A+ L+ KM DP AR T + L +F+S +P
Sbjct: 242 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 148
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 207 GRSAAVWSLGILLYDMV 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
++LGEG++ A + T + AIK + + KE RE ++ L P ++L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
F L+ + + +L IR F + Y + L + H K ++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
D+KP N+L+ +++ DFG A++ S R V Y +PELL K
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
D+WA GCI +L+ P
Sbjct: 214 DLWALGCIIYQLVAGLP 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGLAR+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + ++
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYQM 231
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 134
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 193 GRSAAVWSLGILLYDMV 209
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 133
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 192 GRSAAVWSLGILLYDMV 208
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 149
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 208 GRSAAVWSLGILLYDMV 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
LG+G + ++ D T + A + K L K Q+E ++ EI + + L H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 80
Query: 75 ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
F + +V E + L+ + + Y++ + G + H+ V+H
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
RD+K NL + ++K+ DFGLA R Y APE+L K + VD
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVD 199
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
VW+ GCI LL +P + S + +I +++ +P ++
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------KKNEYS----IPKHIN------- 241
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
P A+ L+ KM DP AR T + L +F+S +P
Sbjct: 242 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 168
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 226
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 227 GRSAAVWSLGILLYDMV 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 134
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 193 GRSAAVWSLGILLYDMV 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 70/311 (22%)
Query: 18 EVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALREIKLLKELKS-PHI 73
++LG G+ G VV++ + G+ VA+K++ ++F AL EIKLL E P++
Sbjct: 39 KILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 89
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK--------SYMQMTLKGLA 125
I + L++ E +L+ ++ + N+ S ++K S ++ G+A
Sbjct: 90 IRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYNPISLLRQIASGVA 147
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ-------------LKLADFGLARIFGSPDRRFTHQV 172
H ++HRD+KP N+L+ + + + ++DFGL + S F +
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 173 F----ARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNR--RPFL-QGSSDIDQLGK 223
+RAPELL + ++ +D+++ GC+F +L++ PF + S + + +
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
IF+ ++ L D RSL A+D L+S+M +DP R
Sbjct: 268 IFS---------LDEMKCLHD------------RSLIAEATD----LISQMIDHDPLKRP 302
Query: 284 TAQQALEHRYF 294
TA + L H F
Sbjct: 303 TAMKVLRHPLF 313
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
LG+G + ++ D T + A + K L K Q+E ++ EI + + L H++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 102
Query: 75 ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
F + +V E + L+ + + Y++ + G + H+ V+H
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
RD+K NL + ++K+ DFGLA R Y APE+L K + VD
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVD 221
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
VW+ GCI LL +P + S L + + S +P ++
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSC----LKETYLRIKKNEYS-------IPKHIN------- 263
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
P A+ L+ KM DP AR T + L +F+S +P
Sbjct: 264 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 299
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 176
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 235 GRSAAVWSLGILLYDMV 251
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 176
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 235 GRSAAVWSLGILLYDMV 251
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
DL K D Y +V+G G +G V T + A+K K + K+ + F R+
Sbjct: 68 DLRMKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMT 120
I SP +++L AF L++V E+M DL ++ N ++ A + Y
Sbjct: 127 IMAFA--NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA--RFYTAEV 182
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF---------GLARI---FGSPDRRF 168
+ L H +HRD+KP+N+L+ G LKLADF G+ R G+PD
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD--- 239
Query: 169 THQVFARWYRAPELL---FGAKQYGAGVDVWAAGCIFAELL 206
Y +PE+L G YG D W+ G E+L
Sbjct: 240 --------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
LG+G + ++ D T + A + K L K Q+E ++ EI + + L H++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 104
Query: 75 ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
F + +V E + L+ + + Y++ + G + H+ V+H
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
RD+K NL + ++K+ DFGLA R Y APE+L K + VD
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVD 223
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
VW+ GCI LL +P + S L + + S +P ++
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSC----LKETYLRIKKNEYS-------IPKHIN------- 265
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
P A+ L+ KM DP AR T + L +F+S +P
Sbjct: 266 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 301
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 18 EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
+V+G+G++G V +KA + V KK L K+KE + + R + LLK +K P +
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNV-LLKNVKHPFL 101
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
+ L +F L+ V +++ +L ++ FL P + Y L + H +
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-ARFYAAEIASALGYLHSLNI 160
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--YRAPELLFGAKQYG 190
++RD+KP N+L+ S G + L DFGL + + + T F Y APE+L + Y
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVL-HKQPYD 217
Query: 191 AGVDVWAAGCIFAELLNRRP 210
VD W G + E+L P
Sbjct: 218 RTVDWWCLGAVLYEMLYGLP 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 70/311 (22%)
Query: 18 EVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALREIKLLKELKS-PHI 73
++LG G+ G VV++ + G+ VA+K++ ++F AL EIKLL E P++
Sbjct: 39 KILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 89
Query: 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK--------SYMQMTLKGLA 125
I + L++ E +L+ ++ + N+ S ++K S ++ G+A
Sbjct: 90 IRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYNPISLLRQIASGVA 147
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ-------------LKLADFGLARIFGSPDRRFTHQV 172
H ++HRD+KP N+L+ + + + ++DFGL + S F +
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 173 F----ARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNR--RPFL-QGSSDIDQLGK 223
+RAPELL + ++ +D+++ GC+F +L++ PF + S + + +
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
IF+ ++ L D RSL A+D L+S+M +DP R
Sbjct: 268 IFS---------LDEMKCLHD------------RSLIAEATD----LISQMIDHDPLKRP 302
Query: 284 TAQQALEHRYF 294
TA + L H F
Sbjct: 303 TAMKVLRHPLF 313
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNX 129
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 188 GRSAAVWSLGILLYDMV 204
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 181
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 240 GRSAAVWSLGILLYDMV 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 156
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 215 GRSAAVWSLGILLYDMV 231
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 132
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 191 GRSAAVWSLGILLYDMV 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 47/316 (14%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 29 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 85
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 206 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 262
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
PD+ + + +QY P +R F L+++S + ++ +E +
Sbjct: 263 DNCPDMLFELMRMCWQY--NPKMRPSF-------LEIISSI-----------KEEMEPGF 302
Query: 294 FSSAPLPTEPNKLPRP 309
+ +E NKLP P
Sbjct: 303 REVSFYYSEENKLPEP 318
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 47/316 (14%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 29 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 85
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 145
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 206 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 262
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
PD+ + + +QY P +R F L+++S + ++ +E +
Sbjct: 263 DNCPDMLFELMRMCWQY--NPKMRPSF-------LEIISSI-----------KEEMEPGF 302
Query: 294 FSSAPLPTEPNKLPRP 309
+ +E NKLP P
Sbjct: 303 REVSFYYSEENKLPEP 318
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 129
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 188 GRSAAVWSLGILLYDMV 204
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
LG+G + ++ D T + A + K L K Q+E ++ EI + + L H++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 78
Query: 75 ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
F + +V E + L+ + + Y++ + G + H+ V+H
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
RD+K NL + ++K+ DFGLA R Y APE+L K + VD
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVD 197
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
VW+ GCI LL +P + S + +I +++ +P ++
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------KKNEYS----IPKHIN------- 239
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
P A+ L+ KM DP AR T + L +F+S +P
Sbjct: 240 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 106
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 107 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 166
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 224
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLKELKSPHIIELI 77
VLG+G +G V TG+ A KK+ + K+ AL E ++L+++ S ++ L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSP-ADIKSYMQMTLKGLAFCHKKWVLHR 135
A+ K L LV M DL+ I + P A Y GL H++ +++R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP N+L+ HG ++++D GLA + + +V Y APE++ ++Y D
Sbjct: 311 DLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDW 368
Query: 196 WAAGCIFAELL-NRRPFLQGSSDI 218
WA GC+ E++ + PF Q I
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 136/320 (42%), Gaps = 30/320 (9%)
Query: 6 LSKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
S + D Y L+ +VLGEG + V I+ T Q A+K I KQ + RE+++
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFREVEM 63
Query: 65 LKELKSP-HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
L + + +++ELI+ F + +LVFE M + + + +Q
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLA---RIFGSPDRRFTHQVF---- 173
L F H K + HRD+KP N+L Q +K+ DF L ++ G T ++
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 174 ARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFG 229
+ Y APE++ A Y D+W+ G I LL+ P G D G
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD----CGWDRG 239
Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289
A P+ L +Y++ P + + S A DL+SK+ D K R++A Q L
Sbjct: 240 EACPACQNMLFESIQEGKYEF----PDKD-WAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 290 EHRYFSSAPLPTEPNKLPRP 309
+H + N LP P
Sbjct: 295 QHPWVQGC---APENTLPTP 311
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 41/222 (18%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-- 75
E++G G +G V+KA G+T I++++ +K A RE+K L +L +I+
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEK------AEREVKALAKLDHVNIVHYN 71
Query: 76 -LIDAFPHK--------------------------GNLHLVFEFMET-DLETVI--RNTN 105
D F + L + EF + LE I R
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165
++ + Q+T KG+ + H K ++HRD+KP+N+ + Q+K+ DFGL +
Sbjct: 132 KLDKVLALELFEQIT-KGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+R + R Y +PE + ++ YG VD++A G I AELL+
Sbjct: 191 KRTRSKGTLR-YMSPEQI-SSQDYGKEVDLYALGLILAELLH 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
+LG G +G VY I VAIK + R+ E N T + E+ LLK++ S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 73 IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+I L+D F + L+ E E DL I L +S+ L+ + CH
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 129
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
VLHRD+K N+LI + G+LKL DFG + D +T R Y PE + + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 190 GAGVDVWAAGCIFAELL 206
G VW+ G + +++
Sbjct: 188 GRSAAVWSLGILLYDMV 204
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 269 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 323
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + T +L + G+A+ +
Sbjct: 324 LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 439
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY--LPD 244
++ DVW+ G + EL + G++ +P + + D
Sbjct: 440 -RFTIKSDVWSFGILLTELTTK-------------GRV----------PYPGMVNREVLD 475
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 476 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 526
Query: 303 PNKLP 307
P P
Sbjct: 527 PQXQP 531
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLKELKSPHIIELI 77
VLG+G +G V TG+ A KK+ + K+ AL E ++L+++ S ++ L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSP-ADIKSYMQMTLKGLAFCHKKWVLHR 135
A+ K L LV M DL+ I + P A Y GL H++ +++R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
D+KP N+L+ HG ++++D GLA + + +V Y APE++ ++Y D
Sbjct: 311 DLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDW 368
Query: 196 WAAGCIFAELL-NRRPFLQGSSDI 218
WA GC+ E++ + PF Q I
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 62/323 (19%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
EV+G G +GVV KA + VAIK+I +++ + E++ L + P+I++L
Sbjct: 15 EVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAF----IVELRQLSRVNHPNIVKLY 68
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHK---KW 131
A + + LV E+ E L V+ + + A S+ +G+A+ H K
Sbjct: 69 GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 132 VLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
++HRD+KP NLL+ + G LK+ DFG A + T+ + + APE +F Y
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMTNNKGSAAWMAPE-VFEGSNYS 182
Query: 191 AGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLG----KIFAAFGTATPSQWPDLAYLPDY 245
DV++ G I E++ RR PF D++G +I A T
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF-------DEIGGPAFRIMWAVHNGT------------- 222
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE-----HRYFSSAPLP 300
PPL P + L+++ ++ DP R + ++ ++ RYF A P
Sbjct: 223 -------RPPLIKNLPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
Query: 301 TE---PNKLPRPATKRASKASDF 320
+ + LP R DF
Sbjct: 273 LQYPCQHSLPPGEDGRVEPYVDF 295
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 62/323 (19%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
EV+G G +GVV KA + VAIK+I +++ + E++ L + P+I++L
Sbjct: 14 EVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAF----IVELRQLSRVNHPNIVKLY 67
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHK---KW 131
A + + LV E+ E L V+ + + A S+ +G+A+ H K
Sbjct: 68 GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 132 VLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
++HRD+KP NLL+ + G LK+ DFG A + T+ + + APE +F Y
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMTNNKGSAAWMAPE-VFEGSNYS 181
Query: 191 AGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLG----KIFAAFGTATPSQWPDLAYLPDY 245
DV++ G I E++ RR PF D++G +I A T
Sbjct: 182 EKCDVFSWGIILWEVITRRKPF-------DEIGGPAFRIMWAVHNGT------------- 221
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE-----HRYFSSAPLP 300
PPL P + L+++ ++ DP R + ++ ++ RYF A P
Sbjct: 222 -------RPPLIKNLPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
Query: 301 TE---PNKLPRPATKRASKASDF 320
+ + LP R DF
Sbjct: 272 LQYPCQHSLPPGEDGRVEPYVDF 294
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+ Y
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
AP ++ +K Y VD WA G + E+
Sbjct: 206 APAIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 79
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 197
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G +G+V+ + VAIK IR G E +F + E +++ +L P +++L
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 71
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + LV EFME L +R + + +G+A+ + V+HRD+
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 131
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+G + +K++DFG+ R D ++T ++ + +PE +F +Y + DV
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 188
Query: 196 WAAGCIFAELLN 207
W+ G + E+ +
Sbjct: 189 WSFGVLMWEVFS 200
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
V+G G+Y V KT + A+K ++ L E +++ + + P ++ L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
F + L V E++ L + Y L + H++ +++RD
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 135
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
+K +N+L+ S G +KL D+G+ + P + Y APE+L G + YG VD W
Sbjct: 136 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWW 194
Query: 197 AAGCIFAELL-NRRPF-LQGSSD 217
A G + E++ R PF + GSSD
Sbjct: 195 ALGVLMFEMMAGRSPFDIVGSSD 217
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 96
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 97 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 156
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 214
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 244
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
V+G G+Y V KT + A+K ++ L E +++ + + P ++ L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
F + L V E++ L + Y L + H++ +++RD
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 131
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
+K +N+L+ S G +KL D+G+ + P + Y APE+L G + YG VD W
Sbjct: 132 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWW 190
Query: 197 AAGCIFAELL-NRRPF-LQGSSD 217
A G + E++ R PF + GSSD
Sbjct: 191 ALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
V+G G+Y V KT + A+K ++ KE VN +I ++ K H+ E
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVK----KELVNDD--EDIDWVQTEK--HVFEQAS 78
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK---------------G 123
P LH F+ E+ L VI +++ D+ +MQ K
Sbjct: 79 NHPFLVGLHSCFQ-TESRLFFVIE----YVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 133
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
L + H++ +++RD+K +N+L+ S G +KL D+G+ + P + Y APE+L
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPF-LQGSSD 217
G + YG VD WA G + E++ R PF + GSSD
Sbjct: 194 RG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E+ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 52/311 (16%)
Query: 10 VADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKE 67
V D Y L ++VLG G G V + +TGQ A+K + K ++ V+ +
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH-------WQA 59
Query: 68 LKSPHIIELIDAFP--HKGN--LHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTL 121
PHI+ ++D + H G L ++ E ME + + + + M+
Sbjct: 60 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 119
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYR 178
+ F H + HRD+KP NLL S + LKL DFG A+ + + +Y
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYV 177
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKI----FAAFGTATP 233
APE+L G ++Y D+W+ G I LL PF + G +G P
Sbjct: 178 APEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 236
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
+W ++ S+DA L+ + DP R+T Q + H +
Sbjct: 237 -EWSEV------------------------SEDAKQLIRLLLKTDPTERLTITQFMNHPW 271
Query: 294 FS-SAPLPTEP 303
+ S +P P
Sbjct: 272 INQSMVVPQTP 282
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 52/311 (16%)
Query: 10 VADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKE 67
V D Y L ++VLG G G V + +TGQ A+K + K ++ V+ +
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH-------WQA 78
Query: 68 LKSPHIIELIDAFP--HKGN--LHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTL 121
PHI+ ++D + H G L ++ E ME + + + + M+
Sbjct: 79 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 138
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYR 178
+ F H + HRD+KP NLL S + LKL DFG A+ + + +Y
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYV 196
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKI----FAAFGTATP 233
APE+L G ++Y D+W+ G I LL PF + G +G P
Sbjct: 197 APEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
+W ++ S+DA L+ + DP R+T Q + H +
Sbjct: 256 -EWSEV------------------------SEDAKQLIRLLLKTDPTERLTITQFMNHPW 290
Query: 294 FS-SAPLPTEP 303
+ S +P P
Sbjct: 291 INQSMVVPQTP 301
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 23 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 79
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 80 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 200 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 256
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 257 DNCPDMLFELMRMCWQY--NPKMRPSF 281
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 74/328 (22%)
Query: 5 DLSKKVADRYLKREVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALRE 61
+ + + + + ++LG G+ G VV++ + G+ VA+K++ ++F AL E
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALME 58
Query: 62 IKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK------ 114
IKLL E P++I + L++ E +L+ ++ + N+ S ++K
Sbjct: 59 IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYN 116
Query: 115 --SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-------------QLKLADFGLAR 159
S ++ G+A H ++HRD+KP N+L+ + ++ ++DFGL +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 160 IFGSPDRRFTHQVF----ARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-- 207
S F + +RAPELL + ++ +D+++ GC+F +L+
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 208 RRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD 266
+ PF + S + + + IF+ ++ L D RSL A+
Sbjct: 237 KHPFGDKYSRESNIIRGIFS---------LDEMKCLHD------------RSLIAEAT-- 273
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
DL+S+M +DP R TA + L H F
Sbjct: 274 --DLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 74/328 (22%)
Query: 5 DLSKKVADRYLKREVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALRE 61
+ + + + + ++LG G+ G VV++ + G+ VA+K++ ++F AL E
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALME 58
Query: 62 IKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK------ 114
IKLL E P++I + L++ E +L+ ++ + N+ S ++K
Sbjct: 59 IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYN 116
Query: 115 --SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-------------QLKLADFGLAR 159
S ++ G+A H ++HRD+KP N+L+ + ++ ++DFGL +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 160 IFGSPDRRFTHQVF----ARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-- 207
S F + +RAPELL + ++ +D+++ GC+F +L+
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 208 RRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD 266
+ PF + S + + + IF+ ++ L D RSL A+
Sbjct: 237 KHPFGDKYSRESNIIRGIFS---------LDEMKCLHD------------RSLIAEAT-- 273
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
DL+S+M +DP R TA + L H F
Sbjct: 274 --DLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 18 EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELK-SP 71
+VLG G YG V+ K TG+ A+K ++ QK E ++L+ ++ SP
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
++ L AF + LHL+ +++ +L T + F + +++ Y+ + L HK
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF-TEHEVQIYVGEIVLALEHLHKL 178
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQ- 188
+++RD+K N+L+ S+G + L DFGL++ F + + + Y AP+++ G
Sbjct: 179 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG 238
Query: 189 YGAGVDVWAAGCIFAELLN 207
+ VD W+ G + ELL
Sbjct: 239 HDKAVDWWSLGVLMYELLT 257
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
D++ + + LG G++G V ++G A+K L KQK + + T L E ++L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68 LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+ P +++L +F NL++V E++ ++ + +R F P + Y + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
H +++RD+KP NLLI G +++ DFG A+ + G+P+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----------L 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
APE++ +K Y VD WA G + E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 27/213 (12%)
Query: 13 RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLG---KQKEGVNFTALREIKL 64
RYLK+ LGEG +G V Y + TG+ VA+K ++ + + G +EI +
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK----QEIDI 86
Query: 65 LKELKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL 121
L+ L HII+ G +L LV E++ L + +I L A + + Q
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQIC 144
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------AR 175
+G+A+ H + +HRD+ N+L+ + +K+ DFGLA+ P+ ++V
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEXYRVREDGDSPVF 202
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208
WY APE L K Y A DVW+ G ELL
Sbjct: 203 WY-APECLKEYKFYYAS-DVWSFGVTLYELLTH 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
V+G G+Y V KT + A++ ++ KE VN +I ++ K H+ E
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVK----KELVNDD--EDIDWVQTEK--HVFEQAS 110
Query: 79 AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK---------------G 123
P LH F+ E+ L VI +++ D+ +MQ K
Sbjct: 111 NHPFLVGLHSCFQ-TESRLFFVIE----YVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 165
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
L + H++ +++RD+K +N+L+ S G +KL D+G+ + P + Y APE+L
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPF-LQGSSD 217
G + YG VD WA G + E++ R PF + GSSD
Sbjct: 226 RG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 22 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 78
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 79 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 199 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 255
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 256 DNCPDMLFELMRMCWQY--NPKMRPSF 280
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGA 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 20 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 76
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 77 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 136
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 197 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 253
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 254 DNCPDMLFELMRMCWQY--NPKMRPSF 278
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 13 RYLKREV-LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
R+LK ++ +G G++ VYK +DT+T VA +++ K + E + LK L+ P
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHP 85
Query: 72 HIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
+I+ D++ K + LV E + L+T ++ + ++S+ + LKGL F
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV-LRSWCRQILKGLQF 144
Query: 127 CHKKW--VLHRDMKPNNLLI-GSHGQLKLADFGLAR---------IFGSPDRRFTHQVFA 174
H + ++HRD+K +N+ I G G +K+ D GLA + G+P+
Sbjct: 145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE--------- 195
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAG-CIFAELLNRRPF 211
+ APE ++Y VDV+A G C + P+
Sbjct: 196 --FXAPEXY--EEKYDESVDVYAFGXCXLEXATSEYPY 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 16 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 72
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 73 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 193 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 249
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 250 DNCPDMLFELMRMCWQY--NPKMRPSF 274
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E ME L++ +R + + + ++ G+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 19 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 75
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 76 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 135
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 196 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 252
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 253 DNCPDMLFELMRMCWQY--NPKMRPSF 277
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 22 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 78
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 79 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 199 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 255
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 256 DNCPDMLFELMRMCWQY--NPKMRPSF 280
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 23 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 79
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 80 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 200 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 256
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 257 DNCPDMLFELMRMCWQY--NPKMRPSF 281
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 9 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 63
Query: 73 IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+++L + + KG+L +F++ ++ +R + A I S
Sbjct: 64 LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 114
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
G+A+ + +HRD++ N+L+G + K+ADFGLAR+ D +T + A++ +
Sbjct: 115 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 171
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
APE L+G ++ DVW+ G + EL R P+ G + + L
Sbjct: 172 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 214
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
D VE Y P P + DL+ + + DP+ R T + QA Y
Sbjct: 215 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 261
Query: 294 FSSAPLPTEPNKLP 307
F+S TEP P
Sbjct: 262 FTS----TEPQYQP 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 240
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + T +L + G+A+ +
Sbjct: 241 LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 356
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY--LPD 244
++ DVW+ G + EL + G++ +P + + D
Sbjct: 357 -RFTIKSDVWSFGILLTELTTK-------------GRV----------PYPGMVNREVLD 392
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 393 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 443
Query: 303 PNKLP 307
P P
Sbjct: 444 PQXQP 448
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73 IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+++L + + KG+L +F++ ++ +R + A I S
Sbjct: 75 LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
G+A+ + +HRD++ N+L+G + K+ADFGLAR+ D +T + A++ +
Sbjct: 126 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
APE L+G ++ DVW+ G + EL R P+ G + + L
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
D VE Y P P + DL+ + + DP+ R T + QA Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
F+S TEP P
Sbjct: 273 FTS----TEPQYQP 282
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 66
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTEPCYTPYYVA 185
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 186 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 13 RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
RYLK+ LGEG +G V Y + TG+ VA+K ++ G + + REI++L+
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ-LRSGWQREIEILRT 67
Query: 68 LKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
L HI++ +G ++ LV E++ L + + L A + + Q +G+
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGM 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYR 178
A+ H + +HR + N+L+ + +K+ DFGLA+ P+ ++V WY
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY- 182
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
APE L K Y A DVW+ G ELL
Sbjct: 183 APECLKECKFYYAS-DVWSFGVTLYELLT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + +L + G+A+ +
Sbjct: 75 LVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + DP+ R T + QA YF+S TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
P P
Sbjct: 278 PQYQP 282
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 13 RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIR--LGKQ-KEGVNFTALREIKL 64
RYLK+ LGEG +G V Y + TG+ VA+K ++ G Q + G +EI +
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK----QEIDI 69
Query: 65 LKELKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL 121
L+ L HII+ +G +L LV E++ L + +I L A + + Q
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQIC 127
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------AR 175
+G+A+ H + +HR++ N+L+ + +K+ DFGLA+ P+ ++V
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVF 185
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
WY APE L K Y A DVW+ G ELL
Sbjct: 186 WY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 20 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 78
Query: 72 HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 79 HVCRLL-GICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 195
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 196 IYTHQSDVWSYGVTVWELMT 215
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + +K +VAIK +++G +K+ +F L E ++ + P+I
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 79
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + +V E ME L++ +R + + + ++ G+ +
Sbjct: 80 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW +PE + ++
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 197
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ + S+
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 11 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 65
Query: 73 IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+++L + + KG+L +F++ ++ +R + A I S
Sbjct: 66 LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 116
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
G+A+ + +HRD++ N+L+G + K+ADFGLAR+ D +T + A++ +
Sbjct: 117 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 173
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
APE L+G ++ DVW+ G + EL R P+ G + + L
Sbjct: 174 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 216
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
D VE Y P P + DL+ + + DP+ R T + QA Y
Sbjct: 217 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 263
Query: 294 FSSAPLPTEPNKLP 307
F+S TEP P
Sbjct: 264 FTS----TEPQYQP 273
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + +L + G+A+ +
Sbjct: 75 LVQLY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + DP+ R T + QA YF+S TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
P P
Sbjct: 278 PQYQP 282
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 14 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 70
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 71 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 191 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 247
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + +QY P +R F
Sbjct: 248 DNCPDMLLELMRMCWQY--NPKMRPSF 272
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 240
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + T +L + G+A+ +
Sbjct: 241 LVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 356
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY--LPD 244
++ DVW+ G + EL + G++ +P + + D
Sbjct: 357 -RFTIKSDVWSFGILLTELTTK-------------GRV----------PYPGMVNREVLD 392
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 393 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 443
Query: 303 PNKLP 307
P P
Sbjct: 444 PQXQP 448
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 13 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 67
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + T +L + G+A+ +
Sbjct: 68 LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 183
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 184 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 219
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 220 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 270
Query: 303 PNKLP 307
P P
Sbjct: 271 PQYQP 275
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 23 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 81
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 82 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 198
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 199 IYTHQSDVWSYGVTVWELMT 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 13 RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
RYLK+ LGEG +G V Y + TG+ VA+K ++ G + + REI++L+
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ-LRSGWQREIEILRT 66
Query: 68 LKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
L HI++ +G ++ LV E++ L + + L A + + Q +G+
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGM 124
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYR 178
A+ H + +HR + N+L+ + +K+ DFGLA+ P+ ++V WY
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY- 181
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
APE L K Y A DVW+ G ELL
Sbjct: 182 APECLKECKFYYAS-DVWSFGVTLYELLT 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 51 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 107
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 108 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 167
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N ++ +K+ DFG+ R D R+ + R
Sbjct: 168 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 228 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 284
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + + +QY P +R F
Sbjct: 285 DNCPDMLFELMRMCWQY--NPKMRPSF 309
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 13 RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIR--LGKQ-KEGVNFTALREIKL 64
RYLK+ LGEG +G V Y + TG+ VA+K ++ G Q + G +EI +
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK----QEIDI 69
Query: 65 LKELKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL 121
L+ L HII+ +G +L LV E++ L + +I L A + + Q
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQIC 127
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------AR 175
+G+A+ H + +HR++ N+L+ + +K+ DFGLA+ P+ ++V
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVF 185
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
WY APE L K Y A DVW+ G ELL
Sbjct: 186 WY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 73
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 74 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 192
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 193 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 222
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + +L + G+A+ +
Sbjct: 75 LVQLY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + DP+ R T + QA YF+S TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
P P
Sbjct: 278 PQYQP 282
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 78 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 15 LKR-EVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG--VNFTALREIKLLKELKS 70
LKR +VLG G +G VYK I G+TV I I++ + G N + E ++ +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 71 PHIIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
PH++ L+ + LV + M LE V + + S + +Q+ KG+ +
Sbjct: 77 PHLVRLL-GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA-KGMMYLE 134
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFG 185
++ ++HRD+ N+L+ S +K+ DFGLAR+ ++ + ++ +W + +
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY- 193
Query: 186 AKQYGAGVDVWAAGCIFAELLN 207
+++ DVW+ G EL+
Sbjct: 194 -RKFTHQSDVWSYGVTIWELMT 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 17 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 71
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + T +L + G+A+ +
Sbjct: 72 LVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 187
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 188 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 223
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 224 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 274
Query: 303 PNKLP 307
P P
Sbjct: 275 PQYQP 279
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 240
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + T +L + G+A+ +
Sbjct: 241 LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 356
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 357 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 392
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 393 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 443
Query: 303 PNKLP 307
P P
Sbjct: 444 PQYQP 448
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG-VNFTALREIKL-LKELKSPH 72
K +VLG G +G V+K + G+++ I I++ + K G +F A+ + L + L H
Sbjct: 35 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 73 IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
I+ L+ P +L LV +++ L +R L P + ++ KG+ + +
Sbjct: 95 IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFGAKQ 188
++HR++ N+L+ S Q+++ADFG+A + D++ + + +W + FG +
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG--K 211
Query: 189 YGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 212 YTHQSDVWSYGVTVWELMT 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 20 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 78
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 79 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 195
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 196 IYTHQSDVWSYGVTVWELMT 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 72
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 73 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 191
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 192 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 221
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 74
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 75 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 193
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 194 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 21 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 80 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 112
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 231
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 232 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 261
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 82
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 83 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 201
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 202 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 231
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 22 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 81 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 68
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 187
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 188 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 2 AEVDLSKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFT 57
++ +K++ Y+K EV+G G +G V + G+ VAIK ++ G E
Sbjct: 3 GSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRRE 61
Query: 58 ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSY 116
L E ++ + + P+II L + + ++ EFME L++ +R + + +
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH---- 170
++ G+ + + +HRD+ N+L+ S+ K++DFGL+R S D +T
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
++ RW APE + +++ + D W+ G + E+++ RP+ S+
Sbjct: 182 KIPIRW-TAPEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 67
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 68 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 186
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 187 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 216
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 66
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 185
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 186 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+++
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKIRHEK 74
Query: 73 IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+++L + + KG+L +F++ ++ +R + A I S
Sbjct: 75 LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
G+A+ + +HRD++ N+L+G + K+ADFGLAR+ D +T + A++ +
Sbjct: 126 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
APE L+G ++ DVW+ G + EL R P+ G + + L
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
D VE Y P P + DL+ + + DP+ R T + QA Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
F+S TEP P
Sbjct: 273 FTS----TEPQYQP 282
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 68
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 187
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 188 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 187 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEK 241
Query: 73 IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+++L + + KG+L +F++ ++ +R + A I S
Sbjct: 242 LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 292
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
G+A+ + +HRD++ N+L+G + K+ADFGL R+ D +T + A++ +
Sbjct: 293 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWT 349
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
APE L+G ++ DVW+ G + EL + G++ +P
Sbjct: 350 APEAALYG--RFTIKSDVWSFGILLTELTTK-------------GRV----------PYP 384
Query: 238 DLAY--LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
+ + D VE Y P P + DL+ + + DP+ R T + QA Y
Sbjct: 385 GMVNREVLDQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 439
Query: 294 FSSAPLPTEPNKLP 307
F+S TEP P
Sbjct: 440 FTS----TEPQXQP 449
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 118
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + M+ +
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 237
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D+W+ G I LL P
Sbjct: 238 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 267
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 66/304 (21%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K K + K+ V T L E ++L+ + P
Sbjct: 155 YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 211
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
+ L +F L V E+ +L + +F S + Y + L + H +
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 270
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYR 178
K V++RD+K NL++ G +K+ DFGL + G+P+ Y
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE-----------YL 319
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
APE+L YG VD W G + E++ R PF + D ++L ++ P
Sbjct: 320 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP---- 372
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHR 292
R+L P A LLS + DPK R+ A++ ++HR
Sbjct: 373 -------------------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHR 409
Query: 293 YFSS 296
+F+
Sbjct: 410 FFAG 413
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 15 LKR-EVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG--VNFTALREIKLLKELKS 70
LKR +VLG G +G VYK I G+TV I I++ + G N + E ++ +
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 71 PHIIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
PH++ L+ + LV + M LE V + + S + +Q+ KG+ +
Sbjct: 100 PHLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA-KGMMYLE 157
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFG 185
++ ++HRD+ N+L+ S +K+ DFGLAR+ ++ + ++ +W + +
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY- 216
Query: 186 AKQYGAGVDVWAAGCIFAELLN 207
+++ DVW+ G EL+
Sbjct: 217 -RKFTHQSDVWSYGVTIWELMT 237
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 113/234 (48%), Gaps = 16/234 (6%)
Query: 19 VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHII 74
V+G G +G V + K VAIK +++G +K+ +F L E ++ + P+II
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNII 86
Query: 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
L + +V E+ME L+T ++ + + + ++ G+ + +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQY 189
HRD+ N+LI S+ K++DFGL+R+ P+ +T ++ RW APE + +++
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TAPEAI-AFRKF 204
Query: 190 GAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+ DVW+ G + E+++ RP+ + ++ D + + + +P P Y
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWEMTNQ-DVIKAVEEGYRLPSPMDCPAALY 257
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 72/314 (22%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73 IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+++L + + KG L +F++ ++ +R + A I S
Sbjct: 75 LVQLYAVVSEEPIYIVTEYMSKGCL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
G+A+ + +HRD++ N+L+G + K+ADFGLAR+ D +T + A++ +
Sbjct: 126 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
APE L+G ++ DVW+ G + EL R P+ G + + L
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
D VE Y P P + DL+ + + DP+ R T + QA Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
F+S TEP P
Sbjct: 273 FTS----TEPQYQP 282
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 17 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 71
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + T +L + G+A+ +
Sbjct: 72 LVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D +T + A++ + APE L+G
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYG- 187
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 188 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 223
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 224 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 274
Query: 303 PNKLP 307
P P
Sbjct: 275 PQYQP 279
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 20 LGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
LG G +G V + + K VAIK ++ G +K +RE +++ +L +P+I+ LI
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLI 76
Query: 78 DAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
+ L LV E L + + +++ + G+ + +K +HRD
Sbjct: 77 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGV 193
+ N+L+ + K++DFGL++ G+ D +T + +W + APE + +++ +
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRS 194
Query: 194 DVWAAGCIFAELLN--RRPF 211
DVW+ G E L+ ++P+
Sbjct: 195 DVWSYGVTMWEALSYGQKPY 214
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 144/352 (40%), Gaps = 91/352 (25%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALRE-------IKLLKELKSPH 72
+GEGT+ VY +A ++++G +++ AL+ I++ EL+
Sbjct: 29 IGEGTFSSVY----------LATAQLQVGPEEK----IALKHLIPTSHPIRIAAELQCLT 74
Query: 73 IIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
+ D + + N H+V + E+ + N LS +++ YM K L
Sbjct: 75 VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN-SLSFQEVREYMLNLFKALKRI 133
Query: 128 HKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFT----------------- 169
H+ ++HRD+KP+N L + L DFGLA+ G+ D +
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ--GTHDTKIELLKFVQSEAQQERCSQN 191
Query: 170 ---------HQVFAR----WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGS 215
QV R +RAPE+L +D+W+AG IF LL+ R PF + S
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 216 SDIDQLGKIFAAFGT------------------ATPSQWPDLAYLPDYVEYQYVAAPPLR 257
D+ L +I G+ P+Q DL L + + + P L
Sbjct: 252 DDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQ--DLRKLCERLRGMDSSTPKLT 309
Query: 258 SLFPSAS----------DDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
S + D+A DLL K+ +P +RITA++AL H +F L
Sbjct: 310 SDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMSL 361
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
E +G G +G V+ VA+K R + + L+E ++LK+ P+I+ LI
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIVRLI 178
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT---LKGLAFCHKKWVL 133
K +++V E ++ D T +R L +K+ +QM G+ + K +
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLR---VKTLLQMVGDAAAGMEYLESKCCI 235
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR-----IFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
HRD+ N L+ LK++DFG++R ++ + QV +W APE L +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG--LRQVPVKW-TAPEAL-NYGR 291
Query: 189 YGAGVDVWAAGCIFAE 204
Y + DVW+ G + E
Sbjct: 292 YSSESDVWSFGILLWE 307
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 20 LGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
LG G +G V + + K VAIK ++ G +K +RE +++ +L +P+I+ LI
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLI 402
Query: 78 DAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
+ L LV E L + + +++ + G+ + +K +HR+
Sbjct: 403 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGV 193
+ N+L+ + K++DFGL++ G+ D +T + +W + APE + +++ +
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRS 520
Query: 194 DVWAAGCIFAELLN 207
DVW+ G E L+
Sbjct: 521 DVWSYGVTMWEALS 534
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK I G+ V AIK +R + N L E ++ + SP
Sbjct: 21 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA-NKEILDEAYVMAGVGSP 79
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
++ L+ + LV + M L +R L D+ ++ KG+++
Sbjct: 80 YVSRLL-GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQVFARWYRAPELLFGAK 187
++HRD+ N+L+ S +K+ DFGLAR+ + + +V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL--RR 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
++ DVW+ G EL+
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72 HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 78 HVCRLL-GICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 66/304 (21%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K K + K+ V T L E ++L+ + P
Sbjct: 152 YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 208
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
+ L +F L V E+ +L + +F S + Y + L + H +
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 267
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYR 178
K V++RD+K NL++ G +K+ DFGL + G+P+ Y
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE-----------YL 316
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
APE+L YG VD W G + E++ R PF + D ++L ++ P
Sbjct: 317 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP---- 369
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHR 292
R+L P A LLS + DPK R+ A++ ++HR
Sbjct: 370 -------------------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406
Query: 293 YFSS 296
+F+
Sbjct: 407 FFAG 410
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 25 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 83
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 84 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 200
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 201 IYTHQSDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 29 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 87
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 88 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 204
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 205 IYTHQSDVWSYGVTVWELMT 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 44 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 102
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 103 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 161
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 219
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 220 IYTHQSDVWSYGVTVWELMT 239
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 72/314 (22%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73 IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
+++L + + KG+L +F++ ++ +R + A I S
Sbjct: 75 LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
G+A+ + +HRD+ N+L+G + K+ADFGLAR+ D +T + A++ +
Sbjct: 126 -GMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
APE L+G ++ DVW+ G + EL R P+ G + + L
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
D VE Y P P + DL+ + + DP+ R T + QA Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
F+S TEP P
Sbjct: 273 FTS----TEPQYQP 282
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG-VNFTALREIKL-LKELKSPH 72
K +VLG G +G V+K + G+++ I I++ + K G +F A+ + L + L H
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 73 IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
I+ L+ P +L LV +++ L +R L P + ++ KG+ + +
Sbjct: 77 IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFGAKQ 188
++HR++ N+L+ S Q+++ADFG+A + D++ + + +W + FG +
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG--K 193
Query: 189 YGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 194 YTHQSDVWSYGVTVWELMT 212
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 22 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 81 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K ++ + K+ V T L E ++L+ + P
Sbjct: 14 YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 70
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
+ L +F L V E+ +L + +F S + Y + L + H +
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 129
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--YRAPELLFGAK 187
K V++RD+K NL++ G +K+ DFGL + G D T + F Y APE+L
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGA-TMKXFCGTPEYLAPEVL-EDN 186
Query: 188 QYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
YG VD W G + E++ R PF + D ++L ++ P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP------------- 231
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFS 295
R+L P A LLS + DPK R+ A++ ++HR+F+
Sbjct: 232 ----------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K ++ + K+ V T L E ++L+ + P
Sbjct: 12 YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 68
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
+ L +F L V E+ +L + +F S + Y + L + H +
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--YRAPELLFGAK 187
K V++RD+K NL++ G +K+ DFGL + G D T + F Y APE+L
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGA-TMKXFCGTPEYLAPEVL-EDN 184
Query: 188 QYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
YG VD W G + E++ R PF + D ++L ++ P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP------------- 229
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFS 295
R+L P A LLS + DPK R+ A++ ++HR+F+
Sbjct: 230 ----------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 26 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 85 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 78 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 22 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 81 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
RD+ N+L+ S+ +KL DFGL+R + + ++ +W APE + +++ +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM-APESI-NFRRFTSA 192
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 193 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 21 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 80 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-- 74
+E LG G +G V + I TG+ VAIK+ R + L EI+++K+L P+++
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSA 78
Query: 75 -ELIDAF----PHKGNLHLVFEFMET-DLETVIRN--TNIFLSPADIKSYMQMTLKGLAF 126
E+ D P+ L L E+ E DL + L I++ + L +
Sbjct: 79 REVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQL---KLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
H+ ++HRD+KP N+++ Q K+ D G A+ + T V Y APELL
Sbjct: 138 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELL 196
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKI 224
K+Y VD W+ G + F + RPFL + GK+
Sbjct: 197 -EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
YLK +LG+GT+G V + TG+ A+K ++ + K+ V T L E ++L+ + P
Sbjct: 13 YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 69
Query: 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
+ L +F L V E+ +L + +F S + Y + L + H +
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 128
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--YRAPELLFGAK 187
K V++RD+K NL++ G +K+ DFGL + G D T + F Y APE+L
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGA-TMKXFCGTPEYLAPEVL-EDN 185
Query: 188 QYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
YG VD W G + E++ R PF + D ++L ++ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP------------- 230
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFS 295
R+L P A LLS + DPK R+ A++ ++HR+F+
Sbjct: 231 ----------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 270
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-- 74
+E LG G +G V + I TG+ VAIK+ R + L EI+++K+L P+++
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSA 77
Query: 75 -ELIDAF----PHKGNLHLVFEFMET-DLETVIRN--TNIFLSPADIKSYMQMTLKGLAF 126
E+ D P+ L L E+ E DL + L I++ + L +
Sbjct: 78 REVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQL---KLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
H+ ++HRD+KP N+++ Q K+ D G A+ + T V Y APELL
Sbjct: 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELL 195
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKI 224
K+Y VD W+ G + F + RPFL + GK+
Sbjct: 196 -EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 22 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 81 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 20 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + +++V E+M L+ + +L + G+A+ +
Sbjct: 75 LVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D T + A++ + APE L+G
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + DP+ R T + QA YF+S TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
P P
Sbjct: 278 PQYQP 282
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT------ALREIKL 64
+ +Y LG G +G V+ A+D + + V +K I+ K E EI +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 65 LKELKSPHIIELIDAFPHKGNLHLVFEFMET--DLETVIRNTNIFLSPADIKSYM-QMTL 121
L ++ +II+++D F ++G LV E + DL I P + SY+ + +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP--LASYIFRQLV 140
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
+ + K ++HRD+K N++I +KL DFG A + + F Y APE
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA-YLERGKLFYTFCGTIEYCAPE 199
Query: 182 LLFGAKQYGAGVDVWAAGC-IFAELLNRRPFLQ 213
+L G G +++W+ G ++ + PF +
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 6 LSKKVADRYLKRE------VLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNF 56
+ KV L RE V+G G +G V + A+K K + K+ E F
Sbjct: 62 FTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACF 121
Query: 57 TALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKS 115
R++ L S I L AF NL+LV ++ + DL T++ L +
Sbjct: 122 REERDV--LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF 179
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG-LARIFGSPDRRFTHQVFA 174
Y+ + + H+ +HRD+KP+N+L+ +G ++LADFG ++ + + V
Sbjct: 180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
Query: 175 RWYRAPELL----FGAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIF 225
Y +PE+L G +YG D W+ G C++ L PF S ++ GKI
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 294
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 71
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 72 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 188
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 189 IYTHQSDVWSYGVTVWELMT 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
E +G G +G V+ VA+K R + + L+E ++LK+ P+I+ LI
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIVRLI 178
Query: 78 DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT---LKGLAFCHKKWVL 133
K +++V E ++ D T +R L +K+ +QM G+ + K +
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLR---VKTLLQMVGDAAAGMEYLESKCCI 235
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPELLFGAKQYG 190
HRD+ N L+ LK++DFG++R + QV +W APE L +Y
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPEAL-NYGRYS 293
Query: 191 AGVDVWAAGCIFAE 204
+ DVW+ G + E
Sbjct: 294 SESDVWSFGILLWE 307
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 456 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
RD+ N+L+ S+ +KL DFGL+R S + + + APE + +++ +
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 573
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 574 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 605
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 78 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 15/209 (7%)
Query: 19 VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHII 74
V+G G +G V + K VAIK +++G +K+ +F L E ++ + P+++
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDF--LCEASIMGQFDHPNVV 107
Query: 75 ELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
L + +V EFME L+ +R + + + ++ G+ + +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFT---HQVFARWYRAPELLFGAKQY 189
HRD+ N+L+ S+ K++DFGL+R+ P+ +T ++ RW APE + +++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TAPEAI-QYRKF 225
Query: 190 GAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ DVW+ G + E+++ RP+ S+
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 20 LGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKELKSPH 72
+GEG +G V++A + + VA+K + K++ + A RE L+ E +P+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKML---KEEASADMQADFQREAALMAEFDNPN 111
Query: 73 IIELIDAFPHKGNLHLVFEFMET-DLETVIRN----TNIFLSPADIKSYMQMT------- 120
I++L+ + L+FE+M DL +R+ T LS +D+ + +++
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 121 ------------LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167
G+A+ ++ +HRD+ N L+G + +K+ADFGL+R S D
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 168 --FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ RW PE +F +Y DVWA G + E+ +
Sbjct: 232 ADGNDAIPIRW-MPPESIF-YNRYTTESDVWAYGVVLWEIFS 271
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT-----------NIFLSPADIKSY 116
+++ L+ A G L ++ EF + +L T +R+ FL+ + Y
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTHQVF 173
KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+ ++
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+W APE +F + Y DVW+ G + E+ +
Sbjct: 210 LKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 210 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 91
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 212 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 247
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VL G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 26 KIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 85 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
+ RE LG+G++G+VY+ + + VAIK + +E + F L E ++KE
Sbjct: 16 MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 72
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
H++ L+ ++ E M DL++ +R+ N L+P + +QM
Sbjct: 73 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
G+A+ + +HRD+ N + +K+ DFG+ R D R+ + R
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W L G + DVW+ G + E+ L +P+ QG S+ L + P
Sbjct: 193 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 249
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
PD+ + +QY P +R F
Sbjct: 250 DNCPDMLLELMRMCWQY--NPKMRPSF 274
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 210 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
RD+ N+L+ S+ +KL DFGL+R + + ++ +W APE + +++ +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 192
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 193 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 21 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 80 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFG A++ G+ ++ + + V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 23 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 81
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 82 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFG A++ G+ ++ + + V +W +L +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 198
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 199 IYTHQSDVWSYGVTVWELMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 21 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 80 HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFG A++ G+ ++ + + V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 54/305 (17%)
Query: 15 LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
L+ EV LG+G +G V+ + T G T VAIK ++ G L+E +++K+L+
Sbjct: 10 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 64
Query: 73 IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
+++L A + + +V E+M L+ + T +L + G+A+ +
Sbjct: 65 LVQLY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
+HRD++ N+L+G + K+ADFGLAR+ D T + A++ + APE L+G
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYG- 180
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
++ DVW+ G + EL R P+ G + + L D
Sbjct: 181 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 216
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
VE Y P P + DL+ + + +P+ R T + QA YF+S TE
Sbjct: 217 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 267
Query: 303 PNKLP 307
P P
Sbjct: 268 PQYQP 272
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 126
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 247 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 282
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 16 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 74
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ +G+ + +
Sbjct: 75 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 191
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 192 IYTHQSDVWSYGVTVWELMT 211
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 15 LKREVLGEGTYGVV-----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
LKRE LGEG +G V Y + VA+K ++ +F RE +LL L+
Sbjct: 17 LKRE-LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH--REAELLTNLQ 73
Query: 70 SPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR------------NTNIFLSPADIKSY 116
HI++ L +VFE+M+ DL +R N L+ + +
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF- 173
Q G+ + + +HRD+ N L+G + +K+ DFG++R S D R H +
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSD 217
RW +++ +++ DVW+ G + E+ ++P+ Q S++
Sbjct: 194 IRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 237
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT-----------NIFLSPADIKSY 116
+++ L+ A G L ++ EF + +L T +R+ FL+ + Y
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTHQVF 173
KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+ ++
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+W APE +F + Y DVW+ G + E+ +
Sbjct: 210 LKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 241
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 5 DLSKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALR 60
+ +K++ Y+K EV+G G +G V + G+ VAIK ++ G E L
Sbjct: 8 EFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRREFLS 66
Query: 61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQM 119
E ++ + + P+II L + + ++ EFME L++ +R + + + ++
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH----QVF 173
G+ + + +HRD+ N+L+ S+ K++DFGL+R S D T ++
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
RW APE + +++ + D W+ G + E+++ RP+ S+
Sbjct: 187 IRW-TAPEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AI ++R + N L E ++ + +P
Sbjct: 53 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKA-NKEILDEAYVMASVDNP 111
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 112 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 228
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 229 IYTHQSDVWSYGVTVWELMT 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT---VAIKKIRLG-KQKEGVNFTALREIKLLK 66
A R +++G G G V GQ VAIK ++ G +++ +F L E ++
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF--LSEASIMG 105
Query: 67 ELKSPHIIELIDAFPHKGNLHLVF-EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+ P+II L + +G L ++ E+ME L+T +R + + + ++ G+
Sbjct: 106 QFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFT---HQVFARWYRAP 180
+ +HRD+ N+L+ S+ K++DFGL+R+ PD +T ++ RW AP
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW-TAP 223
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELL--NRRPF 211
E + + + + DVW+ G + E+L RP+
Sbjct: 224 EAI-AFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 19 VLGEGTYGVVYKA--IDTKTGQT-VAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHII 74
V+G+G +GVVY ID + AIK + R+ + ++ F LRE L++ L P+++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF--LREGLLMRGLNHPNVL 85
Query: 75 ELID-AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
LI P +G H++ +M DL IR+ + D+ S+ +G+ + ++
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK----- 187
+HRD+ N ++ +K+ADFGLAR DR + R R P +
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 188 QYGAGVDVWAAGCIFAELLNR 208
++ DVW+ G + ELL R
Sbjct: 204 RFTTKSDVWSFGVLLWELLTR 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 78 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 136
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
RD+ N+L+ S+ +KL DFGL+R S + + + APE + +++ +
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 195
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 196 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 73 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 131
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
RD+ N+L+ S+ +KL DFGL+R S + + + APE + +++ +
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 190
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 191 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 222
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I+ PD R+
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 5 DLSKKVADRYLKRE-VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTAL 59
+ +K++ +K E V+G G +G V + K VAIK ++ G K+ +F L
Sbjct: 21 EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--L 78
Query: 60 REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQ 118
E ++ + P+II L + ++ E+ME L+ +R + + + ++
Sbjct: 79 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 138
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFA 174
G+ + +HRD+ N+L+ S+ K++DFG++R+ P+ +T ++
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
RW APE + +++ + DVW+ G + E+++ RP+ S+
Sbjct: 199 RW-TAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
RD+ N+L+ S+ +KL DFGL+R S + + + APE + +++ +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 193
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 194 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 104 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 162
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
RD+ N+L+ S+ +KL DFGL+R S + + + APE + +++ +
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 221
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 222 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 253
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VL G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 19 KIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 78 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ +E ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 81 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 139
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
RD+ N+L+ S+ +KL DFGL+R + + ++ +W APE + +++ +
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 197
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 198 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 79 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 137
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
RD+ N+L+ S+ +KL DFGL+R S + + + APE + +++ +
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 196
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 197 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VL G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 26 KIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 85 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFGLA++ G+ ++ + + V +W +L +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 21 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 80 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFG A++ G+ ++ + + V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF-----TALREIKLLKEL 68
+L ++LG+G V++ KTG AIK ++F +RE ++LK+L
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKL 64
Query: 69 KSPHIIELIDAFPHKGNLH--LVFEFMET-DLETVIRN-TNIF-LSPADIKSYMQMTLKG 123
+I++L H L+ EF L TV+ +N + L ++ ++ + G
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 124 LAFCHKKWVLHRDMKPNNLL--IGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + ++HR++KP N++ IG GQ KL DFG AR D +F Y
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVSLYGTEEYLH 183
Query: 180 PELLFGA-------KQYGAGVDVWAAGCIF 202
P++ A K+YGA VD+W+ G F
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF-----TALREIKLLKEL 68
+L ++LG+G V++ KTG AIK ++F +RE ++LK+L
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKL 64
Query: 69 KSPHIIELIDAFPHKGNLH--LVFEFMET-DLETVIRN-TNIF-LSPADIKSYMQMTLKG 123
+I++L H L+ EF L TV+ +N + L ++ ++ + G
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 124 LAFCHKKWVLHRDMKPNNLL--IGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + ++HR++KP N++ IG GQ KL DFG AR D +F Y
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVXLYGTEEYLH 183
Query: 180 PELLFGA-------KQYGAGVDVWAAGCIF 202
P++ A K+YGA VD+W+ G F
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 78 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFG A++ G+ ++ + + V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 43/226 (19%)
Query: 18 EVLGEGTYGVVYKA----IDTKTG-QTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
+ LGEG +G V KA + + G TVA+K + KE + + LR E +LK++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-----KENASPSELRDLLSEFNVLKQV 83
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------- 107
PH+I+L A G L L+ E+ + L +R +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 108 ---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164
L+ D+ S+ +G+ + + ++HRD+ N+L+ ++K++DFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 165 D---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
D +R ++ +W A E LF Y DVW+ G + E++
Sbjct: 204 DSXVKRSQGRIPVKWM-AIESLFD-HIYTTQSDVWSFGVLLWEIVT 247
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16 KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
K +VLG G +G VYK + G+ V AIK++R + N L E ++ + +P
Sbjct: 26 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
H+ L+ + L+ + M L +R + + ++ KG+ + +
Sbjct: 85 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
++HRD+ N+L+ + +K+ DFG A++ G+ ++ + + V +W +L +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
Y DVW+ G EL+
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 90
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT--------------NIFLSPADI 113
+++ L+ A G L ++ EF + +L T +R+ FL+ +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTH 170
Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I PD R+
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 211 RLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 43/226 (19%)
Query: 18 EVLGEGTYGVVYKA----IDTKTG-QTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
+ LGEG +G V KA + + G TVA+K + KE + + LR E +LK++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-----KENASPSELRDLLSEFNVLKQV 83
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------- 107
PH+I+L A G L L+ E+ + L +R +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 108 ---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164
L+ D+ S+ +G+ + + ++HRD+ N+L+ ++K++DFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 165 D---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
D +R ++ +W A E LF Y DVW+ G + E++
Sbjct: 204 DSXVKRSQGRIPVKWM-AIESLFD-HIYTTQSDVWSFGVLLWEIVT 247
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 37/223 (16%)
Query: 18 EVLGEGTYGVVYKAID---TKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELKS-PH 72
+VLG G +G V A +KTG ++ + L ++ + AL E+K++ +L S +
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 73 IIELIDAFPHKGNLHLVFEFM-ETDLETVIR-----------------------NTNIFL 108
I+ L+ A G ++L+FE+ DL +R + N+ L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV-L 169
Query: 109 SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL-KLADFGLARIFGSPDRR 167
+ D+ + KG+ F K +HRD+ N+L+ +HG++ K+ DFGLAR S D
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKICDFGLARDIMS-DSN 227
Query: 168 FTHQVFARW---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ + AR + APE LF Y DVW+ G + E+ +
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFS 269
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 43/226 (19%)
Query: 18 EVLGEGTYGVVYKA----IDTKTG-QTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
+ LGEG +G V KA + + G TVA+K + KE + + LR E +LK++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-----KENASPSELRDLLSEFNVLKQV 83
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------- 107
PH+I+L A G L L+ E+ + L +R +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 108 ---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164
L+ D+ S+ +G+ + + ++HRD+ N+L+ ++K++DFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 165 D---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
D +R ++ +W A E LF Y DVW+ G + E++
Sbjct: 204 DSYVKRSQGRIPVKWM-AIESLFD-HIYTTQSDVWSFGVLLWEIVT 247
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 456 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
RD+ N+L+ + +KL DFGL+R S + + + APE + +++ +
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 573
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 574 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 605
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I PD R+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 210 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 147
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE LF + Y DVW+ G + E+
Sbjct: 268 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 300
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
+ D + +VLG G G V + + +T + A+K ++ + A RE++L +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPK-------ARREVELHWRAS 112
Query: 69 KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
+ PHI+ ++D + + + L +V E ++ +L + I++ + + + + +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
+ + H + HRD+KP NLL S + LKL DFG A+ S + T + +Y A
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 231
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
PE+L G ++Y D W+ G I LL P
Sbjct: 232 PEVL-GPEKYDKSCDXWSLGVIXYILLCGYP 261
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I PD R+
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 5 DLSKKVADRYLKRE-VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTAL 59
+ +K++ +K E V+G G +G V + K VAIK ++ G K+ +F L
Sbjct: 6 EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--L 63
Query: 60 REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQ 118
E ++ + P+II L + ++ E+ME L+ +R + + + ++
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFA 174
G+ + +HRD+ N+L+ S+ K++DFG++R+ P+ +T ++
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
RW APE + +++ + DVW+ G + E+++ RP+ S+
Sbjct: 184 RW-TAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
+GEG +G V++ I VAIK + + V L+E +++ PHI++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76 LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
LI + + ++ E +L + ++ L A + Y LA+ K +H
Sbjct: 76 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
RD+ N+L+ + +KL DFGL+R + + ++ +W APE + +++ +
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 192
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
DVW G E+L +PF QG + D +G+I
Sbjct: 193 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 34/216 (15%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEF-----------------MET--DLETVIRNTNIFLSPAD 112
+II L+ A G L+++ E+ ME D+ V F D
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF---KD 158
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTH 170
+ S +G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 219 GRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
+ LG G +G V +A G+ A+ K+ + K + + E+K++ L + +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 IIELIDAFPHKGNLHLVFEF----------------METDLETVIRNTNIFLSPADIKSY 116
I+ L+ A H G + ++ E+ +ETD I N+ LS D+ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST--LSTRDLLHF 169
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
+G+AF K +HRD+ N+L+ + K+ DFGLAR + D + + AR
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARL 228
Query: 177 ---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE +F Y DVW+ G + E+ +
Sbjct: 229 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+GEG +GVVYK T TVA+KK+ + E + +EIK++ + + +++EL+
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-----KGLAFCHKKWV 132
+L LV+ +M +++ + + +M+ + G+ F H+
Sbjct: 97 GFSSDGDDLCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGA 186
+HRD+K N+L+ K++DFGLAR +F V Y APE L G
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLAR----ASEKFAQTVMXSRIVGTTAYMAPEALRG- 209
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
+ D+++ G + E++ P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 35/216 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 91
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT-------------NIFLSPADIK 114
+++ L+ A G L ++ EF + +L T +R+ FL+ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTHQ 171
Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I PD R+ +
Sbjct: 152 XYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ +W APE +F + Y DVW+ G + E+ +
Sbjct: 212 LPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 70/256 (27%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
RY LG G + V+ + D + + VA+K + K E TAL EI+LLK +++
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV---KSAEHYTETALDEIRLLKSVRNSD 94
Query: 73 --------IIELIDAFPHKG----NLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQM 119
+++L+D F G ++ +VFE + L + +I++ L +K +Q
Sbjct: 95 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 154
Query: 120 TLKGLAFCHKKW-VLHRDMKPNNLLIGSHGQ----------------------------- 149
L+GL + H K ++H D+KP N+L+ + Q
Sbjct: 155 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 214
Query: 150 --------------------LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
+K+AD G A + FT + R YR+ E+L G+ Y
Sbjct: 215 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWV---HKHFTEDIQTRQYRSLEVLIGSG-Y 270
Query: 190 GAGVDVWAAGCIFAEL 205
D+W+ C+ EL
Sbjct: 271 NTPADIWSTACMAFEL 286
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + K VAIK ++ G K+ +F L E ++ + P+I
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--LSEASIMGQFDHPNI 71
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + ++ E+ME L+ +R + + + ++ G+ +
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
+HRD+ N+L+ S+ K++DFG++R+ P+ +T ++ RW APE + ++
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAI-AYRK 189
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ + DVW+ G + E+++ RP+ S+
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+GEG +GVVYK T TVA+KK+ + E + +EIK++ + + +++EL+
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-----KGLAFCHKKWV 132
+L LV+ +M +++ + + +M+ + G+ F H+
Sbjct: 97 GFSSDGDDLCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGA 186
+HRD+K N+L+ K++DFGLAR +F V Y APE L G
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLAR----ASEKFAQTVMXXRIVGTTAYMAPEALRG- 209
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
+ D+++ G + E++ P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K K VA+K I+ G E F +E + + +L P +++
Sbjct: 16 LGSGQFGVV-KLGKWKGQYDVAVKMIKEGSMSEDEFF---QEAQTMMKLSHPKLVKFYGV 71
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ +++V E++ L +R+ L P+ + +G+AF +HRD+
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLA 131
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+ +K++DFG+ R D ++ V ++ + APE +F +Y + DV
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYV--LDDQYVSSVGTKFPVKWSAPE-VFHYFKYSSKSDV 188
Query: 196 WAAGCIFAEL--LNRRPF 211
WA G + E+ L + P+
Sbjct: 189 WAFGILMWEVFSLGKMPY 206
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 74/285 (25%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
RY LG G + V+ D + + VA+K + K + TAL EIKLLK ++
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVV---KSAQHYTETALDEIKLLKCVRESD 88
Query: 73 --------IIELIDAFPHKG----NLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQM 119
+++LID F G ++ +VFE + L + +I++ L +KS ++
Sbjct: 89 PSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQ 148
Query: 120 TLKGLAFCHKKW-VLHRDMKPNNLLI---------------------------------- 144
L+GL + H K ++H D+KP N+L+
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAP 208
Query: 145 -------------GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
++K+AD G A + FT + R YR+ E+L GA Y
Sbjct: 209 AADLLVNPLDPRNADKIRVKIADLGNACWV---HKHFTEDIQTRQYRSIEVLIGAG-YST 264
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSS------DIDQLGKIFAAFGT 230
D+W+ C+ EL + S D D + I G+
Sbjct: 265 PADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 93
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 154 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 214 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 245
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 90
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 151 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 211 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 242
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
+GEG +GVVYK T TVA+KK+ + E + +EIK++ + + +++EL+
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-----KGLAFCHKKWV 132
+L LV+ +M +++ + + +M+ + G+ F H+
Sbjct: 91 GFSSDGDDLCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGA 186
+HRD+K N+L+ K++DFGLAR +F V Y APE L G
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLAR----ASEKFAQXVMXXRIVGTTAYMAPEALRG- 203
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
+ D+++ G + E++ P
Sbjct: 204 -EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT---VAIKKIRLG-KQKEGVNFTALREIKLLK 66
A R +++G G G V GQ VAIK ++ G +++ +F L E ++
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF--LSEASIMG 105
Query: 67 ELKSPHIIELIDAFPHKGNLHLVF-EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+ P+II L + +G L ++ E+ME L+T +R + + + ++ G+
Sbjct: 106 QFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFT---HQVFARWYRAP 180
+ +HRD+ N+L+ S+ K++DFGL+R+ PD T ++ RW AP
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW-TAP 223
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELL--NRRPF 211
E + + + + DVW+ G + E+L RP+
Sbjct: 224 EAI-AFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 88
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 149 CTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 209 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 240
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 20 LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
LG G +G V +A ID T T +TVA+K + KEG + R E+K+L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70 SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
+++ L+ A G L ++ EF + +L T +R+ FL+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
+ Y KG+ F + +HRD+ N+L+ +K+ DFGLAR I PD R+
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ +W APE +F + Y DVW+ G + E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 12 DRYLKREVLGEGTYGVV-----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
D LKRE LGEG +G V Y TK VA+K ++ +F RE +LL
Sbjct: 16 DIVLKRE-LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ--REAELLT 72
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR----NTNIFL--SPADIKSYMQM 119
L+ HI++ L +VFE+M+ DL +R + I + P K + +
Sbjct: 73 NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 120 T---------LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRF 168
+ G+ + + +HRD+ N L+G++ +K+ DFG++R S D R
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192
Query: 169 THQVF-ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
H + RW +++ +++ DVW+ G I E+ ++P+ Q S+
Sbjct: 193 GHTMLPIRWMPPESIMY--RKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 70/256 (27%)
Query: 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
RY LG G + V+ + D + + VA+K + K E TAL EI+LLK +++
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV---KSAEHYTETALDEIRLLKSVRNSD 78
Query: 73 --------IIELIDAFPHKG----NLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQM 119
+++L+D F G ++ +VFE + L + +I++ L +K +Q
Sbjct: 79 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 138
Query: 120 TLKGLAFCHKKW-VLHRDMKPNNLLIGSHGQ----------------------------- 149
L+GL + H K ++H D+KP N+L+ + Q
Sbjct: 139 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 198
Query: 150 --------------------LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
+K+AD G A + FT + R YR+ E+L G+ Y
Sbjct: 199 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWV---HKHFTEDIQTRQYRSLEVLIGSG-Y 254
Query: 190 GAGVDVWAAGCIFAEL 205
D+W+ C+ EL
Sbjct: 255 NTPADIWSTACMAFEL 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 18 EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
+V+G G +G V + K VAIK ++ G +K+ +F L E ++ + P++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDF--LSEASIMGQFDHPNV 96
Query: 74 IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
I L + ++ EFME L++ +R + + + ++ G+ +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH----QVFARWYRAPELLFGA 186
+HRD+ N+L+ S+ K++DFGL+R + D +T ++ RW APE +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPEAI-QY 214
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPF 211
+++ + DVW+ G + E+++ RP+
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPY 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 14 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 68
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 69 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D +T + A++ + APE A
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 176
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 235
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 29 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL 83
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 84 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D +T + A++ + APE A
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 191
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 250
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIE 75
+E +G G++G V++A G VA+K + E VN LRE+ ++K L+ P+I+
Sbjct: 42 KEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVL 98
Query: 76 LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKW- 131
+ A NL +V E++ + + + D + + M KG+ + H +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 132 -VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
++HRD+K NLL+ +K+ DFGL+R+ S + APE+L
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS-N 217
Query: 191 AGVDVWAAGCIFAEL 205
DV++ G I EL
Sbjct: 218 EKSDVYSFGVILWEL 232
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 25 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 79
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 80 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D +T + A++ + APE A
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 187
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 246
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 17 REVLGEGTYGVVYKA--IDTKTGQT-VAIKKI-RLGKQKEGVNFTALREIKLLKELKSPH 72
EV+G G +G VY +D + A+K + R+ E F L E ++K+ P+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPN 151
Query: 73 IIELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
++ L+ +G+ +V +M+ DL IRN + D+ + KG+ F K
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFG 185
+HRD+ N ++ +K+ADFGLAR F S + ++ +W L
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--Q 269
Query: 186 AKQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTR 292
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 24 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 78
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 79 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D +T + A++ + APE A
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 186
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K + VAIK I+ G E + E K++ L +++L
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + ++ E+M L +R + + + + + K LHRD+
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+ G +K++DFGL+R D +T V +++ + PE+L +K + + D+
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 204
Query: 196 WAAGCIFAEL--LNRRPF 211
WA G + E+ L + P+
Sbjct: 205 WAFGVLMWEIYSLGKMPY 222
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D + T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ E+ + +L +R + +I P D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +++ADFGLAR + D ++ T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 79
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 80 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 200 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 239
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 19 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 74 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D +T + A++ + APE A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 71
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 72 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 192 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 231
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 75
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 76 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 196 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 235
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 246
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 78
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 79 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 199 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 238
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ F K
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR F S + ++ +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 246
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 94
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ F K
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR F S + ++ +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 212
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTR 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 98
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ F K
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR F S + ++ +W L
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 216
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTR 238
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 94
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ F K
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR F S + ++ +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL--QT 212
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTR 234
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K + VAIK I+ G E + E K++ L +++L
Sbjct: 12 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 67
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + ++ E+M L +R + + + + + K LHRD+
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 127
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+ G +K++DFGL+R D +T V +++ + PE+L +K + + D+
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 184
Query: 196 WAAGCIFAEL--LNRRPF 211
WA G + E+ L + P+
Sbjct: 185 WAFGVLMWEIYSLGKMPY 202
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K + VAIK I+ G E + E K++ L +++L
Sbjct: 16 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 71
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + ++ E+M L +R + + + + + K LHRD+
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 131
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+ G +K++DFGL+R D +T V +++ + PE+L +K + + D+
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 188
Query: 196 WAAGCIFAEL--LNRRPF 211
WA G + E+ L + P+
Sbjct: 189 WAFGVLMWEIYSLGKMPY 206
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ F K
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR F S + ++ +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 91
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ F K
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR F S + ++ +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 209
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTR 231
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
LG G +G V+ + T G T VAIK ++ G + L E +++K+LK +++L
Sbjct: 17 LGNGQFGEVW--MGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIMKKLKHDKLVQLY- 70
Query: 79 AFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
A + +++V E+M L+ + L ++ G+A+ + +HRD
Sbjct: 71 AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 130
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGAKQYGAG 192
++ N+L+G+ K+ADFGLAR+ D T + A++ + APE L+G ++
Sbjct: 131 LRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYG--RFTIK 186
Query: 193 VDVWAAGCIFAELLNR 208
DVW+ G + EL+ +
Sbjct: 187 SDVWSFGILLTELVTK 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K + VAIK I+ G E + E K++ L +++L
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 72
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + ++ E+M L +R + + + + + K LHRD+
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+ G +K++DFGL+R D +T V +++ + PE+L +K + + D+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 189
Query: 196 WAAGCIFAEL--LNRRPF 211
WA G + E+ L + P+
Sbjct: 190 WAFGVLMWEIYSLGKMPY 207
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K + VAIK I+ G E + E K++ L +++L
Sbjct: 23 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 78
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + ++ E+M L +R + + + + + K LHRD+
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 138
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+ G +K++DFGL+R D +T V +++ + PE+L +K + + D+
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 195
Query: 196 WAAGCIFAEL--LNRRPF 211
WA G + E+ L + P+
Sbjct: 196 WAFGVLMWEIYSLGKMPY 213
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12 DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
DR + + LGEG +G V+ +AI + VA+K ++ ++ ++ + E+++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 127
Query: 65 LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
+K + K +II L+ A G L+++ E+ + +L ++ N
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
LS D+ S +G+ + K +HRD+ N+L+ +K+ADFGLAR D
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
++ T+ + APE LF + Y DVW+ G + E+
Sbjct: 248 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 287
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
+ LG G +G V +A G+ A+ K+ + K + + E+K++ L + +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 IIELIDAFPHKGNLHLVFEF----------------METDLETVIRNTNIFLSPADIKSY 116
I+ L+ A H G + ++ E+ +ETD I N+ S D+ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA--STRDLLHF 169
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
+G+AF K +HRD+ N+L+ + K+ DFGLAR + D + + AR
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARL 228
Query: 177 ---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE +F Y DVW+ G + E+ +
Sbjct: 229 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
+V+G G +G V T + A+K K + K+ E F R++ L I
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV--LVNGDCQWIT 153
Query: 75 ELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
L AF + +L+LV ++ + DL T++ L + Y+ + + H+ +
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 213
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR------------IFGSPDRRFTHQVFARWYRAPE 181
HRD+KP+N+L+ +G ++LADFG G+PD Y +PE
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD-----------YISPE 262
Query: 182 LLF----GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIF 225
+L G +YG D W+ G C++ L PF S ++ GKI
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 310
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
+V+G G +G V T + A+K K + K+ E F R++ L I
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV--LVNGDCQWIT 137
Query: 75 ELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
L AF + +L+LV ++ + DL T++ L + Y+ + + H+ +
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 197
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR------------IFGSPDRRFTHQVFARWYRAPE 181
HRD+KP+N+L+ +G ++LADFG G+PD Y +PE
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD-----------YISPE 246
Query: 182 LLF----GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIF 225
+L G +YG D W+ G C++ L PF S ++ GKI
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 294
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G VYK K VA+K + + E+ +L++ + +I+ L
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 75
Query: 80 FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ K L +V ++ E + L + + + + T +G+ + H K ++HRD+K
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 135
Query: 139 PNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPEL--LFGAKQYGAGVD 194
NN+ + +K+ DFGLA + S +F + + APE+ + + Y D
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 195 VWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
V+A G + EL+ + P+ S+I+ +I G + S PDL+
Sbjct: 196 VYAFGIVLYELMTGQLPY----SNINNRDQIIEMVGRGSLS--PDLS 236
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 18 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 74
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
+ G+A+ + K +HRD+ N ++ +K+ DFG+ R D R+ +
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
+ APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 195 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 252
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 253 NCPE--RVTDLMRMCWQFNPKMRPTF 276
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 21 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
+ G+A+ + K +HRD+ N ++ +K+ DFG+ R D R+ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
+ APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPKMRPTF 279
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 15 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 69
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 70 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HR+++ N+L+ K+ADFGLAR+ D +T + A++ + APE A
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 177
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 236
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 25 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 79
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 80 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 187
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 246
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 21 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
+ G+A+ + K +HRD+ N ++ +K+ DFG+ R D R+ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
+ APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPNMRPTF 279
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIE 75
+E +G G++G V++A G VA+K + E VN LRE+ ++K L+ P+I+
Sbjct: 42 KEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVL 98
Query: 76 LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKW- 131
+ A NL +V E++ + + + D + + M KG+ + H +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 132 -VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
++HR++K NLL+ +K+ DFGL+R+ S + APE+L
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPS-N 217
Query: 191 AGVDVWAAGCIFAEL 205
DV++ G I EL
Sbjct: 218 EKSDVYSFGVILWEL 232
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 27 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL 81
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 82 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 189
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 248
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTAL 59
+ + VA + E +G+G YG V++ + G+ VA+K +K E N L
Sbjct: 2 MQRTVAHQITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML 59
Query: 60 REIKLL----KELKSPHI---IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
R +L ++ S H + LI + G+L+ + D + +R I LS A
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR---IVLSIAS 116
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---- 168
+++ + + G K + HRD+K N+L+ +GQ +AD GLA + +
Sbjct: 117 GLAHLHIEIFGTQ--GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 169 THQVFARWYRAPELLFGAKQYGA-----GVDVWAAGCIFAELLNR 208
+V + Y APE+L Q VD+WA G + E+ R
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 19 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 74 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 28 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 82
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 83 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 190
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 249
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +G V+ A K + VA+K ++ G L E ++K L+ +++L A
Sbjct: 23 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKL-HA 77
Query: 80 FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPA-DIKSYMQMTLKGLAFCHKKWVLHRDM 137
K ++++ EFM + L +++ P + + +G+AF ++ +HRD+
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAGV 193
+ N+L+ + K+ADFGLAR+ D +T + A++ + APE + FG+ +
Sbjct: 138 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGS--FTIKS 193
Query: 194 DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
DVW+ G + E++ R P+ G S+ + + + + P P+ Y
Sbjct: 194 DVWSFGILLMEIVTYGRIPY-PGMSNPEVIRALERGYRMPRPENCPEELY 242
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ + + +L +R + +I P D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 92
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL--QT 210
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTR 232
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +G V+ A K + VA+K ++ G L E ++K L+ +++L A
Sbjct: 196 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKL-HA 250
Query: 80 FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPA-DIKSYMQMTLKGLAFCHKKWVLHRDM 137
K ++++ EFM + L +++ P + + +G+AF ++ +HRD+
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAGV 193
+ N+L+ + K+ADFGLAR+ D +T + A++ + APE + FG+ +
Sbjct: 311 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGS--FTIKS 366
Query: 194 DVWAAGCIFAELLN--RRPF 211
DVW+ G + E++ R P+
Sbjct: 367 DVWSFGILLMEIVTYGRIPY 386
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 20 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 74
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 75 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 182
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 241
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 21 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 75
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 76 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 183
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 242
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G +G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 19 ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 74 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTAL 59
+ + VA + E +G+G YG V++ + G+ VA+K +K E N L
Sbjct: 31 VQRTVARQITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML 88
Query: 60 REIKLL----KELKSPHI---IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
R +L ++ S H + LI + G+L+ + D + +R I LS A
Sbjct: 89 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR---IVLSIAS 145
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---- 168
+++ + + G K + HRD+K N+L+ +GQ +AD GLA + +
Sbjct: 146 GLAHLHIEIFGTQ--GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 203
Query: 169 THQVFARWYRAPELLFGAKQYGA-----GVDVWAAGCIFAELLNR 208
+V + Y APE+L Q VD+WA G + E+ R
Sbjct: 204 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 20 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 76
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
+ G+A+ + K +HRD+ N ++ +K+ DFG+ R D R+ +
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
+ APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 197 WMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 254
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 255 NCPE--RVTDLMRMCWQFNPKMRPTF 278
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 21 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
+ G+A+ + K +HRD+ N ++ +K+ DFG+ R D R+ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
+ APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPKMRPTF 279
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 20 LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
LGEG +G V A ID K TVA+K ++ ++ ++ + E++++K + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72 HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
+II L+ A G L+++ + + +L +R + +I P D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
+G+ + + +HRD+ N+L+ + +K+ADFGLAR + D ++ T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
+ APE LF + Y DVW+ G + E+
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 112
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 230
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTR 252
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 111
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 229
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTR 251
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K + VAIK I+ G E + E K++ L +++L
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + ++ E+M L +R + + + + + K LHRD+
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 139 PNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
N L+ G +K++DFGL+R + + F + PE+L +K + + D+WA
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWA 206
Query: 198 AGCIFAEL--LNRRPF 211
G + E+ L + P+
Sbjct: 207 FGVLMWEIYSLGKMPY 222
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA--IDTKTGQT-VAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY +D + A+K + R+ E F L E ++K+ P++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 85
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 203
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTR 225
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA--IDTKTGQT-VAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY +D + A+K + R+ E F L E ++K+ P++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
+V +++ +G G++G +Y + +T + VAIK + + + L E K+ + L
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQL----LYESKIYRIL 59
Query: 69 KSPHIIELIDAFPHKGNLH-LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
+ I + F +G+ + LV + + LE + + LS + + + F
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 119
Query: 128 HKKWVLHRDMKPNNLLIG---SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
H K LHRD+KP+N L+G Q+ + DFGLA+ + THQ YR + L
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS---THQHIP--YRENKNLT 174
Query: 185 GAKQYGA 191
G +Y +
Sbjct: 175 GTARYAS 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 91
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 209
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTR 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 90
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 208
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTR 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 88
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 206
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTR 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
YL + LGEG + V G A+K+I +Q++ A RE + + P+I
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFNHPNI 88
Query: 74 IELID-AFPHKGNLH---LVFEFME-----TDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
+ L+ +G H L+ F + ++E +++ FL+ I + +GL
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER-LKDKGNFLTEDQILWLLLGICRGL 147
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG-----LARIFGSPD----RRFTHQVFAR 175
H K HRD+KP N+L+G GQ L D G + GS + + Q
Sbjct: 148 EAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 176 WYRAPELLFGAKQYGA---GVDVWAAGCI-FAELLNRRPF 211
YRAPE LF + + DVW+ GC+ +A + P+
Sbjct: 208 SYRAPE-LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 92
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 210
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTR 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18 EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
EV+G G +G VY + G+ + A+K + R+ E F L E ++K+ P++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74 IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
+ L+ +G+ +V +M+ DL IRN + D+ + KG+ + K
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
+HRD+ N ++ +K+ADFGLAR + H ++ +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
+++ DVW+ G + EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTAL 59
+ + VA E +G+G YG V++ + G+ VA+K +K E N L
Sbjct: 2 MQRTVARDITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML 59
Query: 60 REIKLL----KELKSPHI---IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
R +L ++ S H + LI + G+L+ + D + +R I LS A
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR---IVLSIAS 116
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---- 168
+++ + + G K + HRD+K N+L+ +GQ +AD GLA + +
Sbjct: 117 GLAHLHIEIFGTQ--GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 169 THQVFARWYRAPELLFGAKQYGA-----GVDVWAAGCIFAELLNR 208
+V + Y APE+L Q VD+WA G + E+ R
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 7 SKKVADRYLKRE-VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALRE 61
SK++ +K E V+G G +G V + K VAIK ++ G +K+ +F L E
Sbjct: 1 SKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDF--LSE 58
Query: 62 IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT 120
++ + P++I L + ++ EFME L++ +R + + + ++
Sbjct: 59 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 118
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH----QVFA 174
G+ + +HR + N+L+ S+ K++DFGL+R + D +T ++
Sbjct: 119 AAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPF 211
RW APE + +++ + DVW+ G + E+++ RP+
Sbjct: 179 RW-TAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERPY 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
+ LG G +G V +A G+ A+ K+ + K + + E+K++ L + +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 IIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIFLSPADIKSY 116
I+ L+ A H G + ++ E+ DL +R N LS D+ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
+G+AF K +HRD+ N+L+ + K+ DFGLAR + D + + AR
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARL 230
Query: 177 ---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE +F Y DVW+ G + E+ +
Sbjct: 231 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFS 263
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G VYK K VA+K + + E+ +L++ + +I+ L
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 87
Query: 80 FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ K L +V ++ E + L + + + + T +G+ + H K ++HRD+K
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 139 PNNLLIGSHGQLKLADFGLA--RIFGSPDRRFTHQVFARWYRAPEL--LFGAKQYGAGVD 194
NN+ + +K+ DFGLA + S +F + + APE+ + + Y D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 195 VWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
V+A G + EL+ + P+ S+I+ +I G + S PDL+
Sbjct: 208 VYAFGIVLYELMTGQLPY----SNINNRDQIIEMVGRGSLS--PDLS 248
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +G V+ + + VA+K ++ G L E L+K L+ ++ L
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAV 76
Query: 80 FPHKGNLHLVFEFM-ETDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
+ ++++ E+M + L +++ L P I Q+ +G+A+ +K +HRD
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA-EGMAYIERKNYIHRD 135
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAG 192
++ N+L+ K+ADFGLAR+ D +T + A++ + APE + FG +
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGC--FTIK 191
Query: 193 VDVWAAGCIFAELLN 207
DVW+ G + E++
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD- 165
++ D+ SY +G+ F + +HRD+ N+L+ + +K+ DFGLAR I+ +PD
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
R+ ++ +W APE +F K Y DVW+ G + E+ +
Sbjct: 256 VRKGDTRLPLKWM-APESIFD-KIYSTKSDVWSYGVLLWEIFS 296
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 29/267 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 21 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVF--AR 175
+ G+A+ + K +HRD+ N ++ +K+ DFG+ R I+ + R + R
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
W APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 198 WM-APESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQP 254
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 255 DNCPE--RVTDLMRMCWQFNPKMRPTF 279
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +G V+ + + VA+K ++ G L E L+K L+ ++ L
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAV 75
Query: 80 FPHKGNLHLVFEFM-ETDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
+ ++++ EFM + L +++ L P I Q+ +G+A+ +K +HRD
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA-EGMAYIERKNYIHRD 134
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAG 192
++ N+L+ K+ADFGLAR+ D +T + A++ + APE + FG +
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGC--FTIK 190
Query: 193 VDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
+VW+ G + E++ + P+ G ++ D + + + PD Y
Sbjct: 191 SNVWSFGILLYEIVTYGKIPY-PGRTNADVMSALSQGYRMPRMENCPDELY 240
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 86/211 (40%), Gaps = 13/211 (6%)
Query: 28 VYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKSPHIIELIDAFPHKGNL 86
VY+A DT + VA+K + V T RE + L+ PH++ + D G L
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG 145
++ + DL +R P + Q+ L H HRD+KP N+L+
Sbjct: 110 YVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIG-SALDAAHAAGATHRDVKPENILVS 168
Query: 146 SHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIF 202
+ L DFG+A + D + T + V +Y APE F D++A C+
Sbjct: 169 ADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYRADIYALTCVL 225
Query: 203 AELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
E L P QG DQL A A P
Sbjct: 226 YECLTGSPPYQG----DQLSVXGAHINQAIP 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +GVV K + VAIK I+ G E + E K++ L +++L
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 72
Query: 80 FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ + ++ E+M L +R + + + + + K LHRD+
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
N L+ G +K++DFGL+R D +T +++ + PE+L +K + + D+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKFPVRWSPPEVLMYSK-FSSKSDI 189
Query: 196 WAAGCIFAEL--LNRRPF 211
WA G + E+ L + P+
Sbjct: 190 WAFGVLMWEIYSLGKMPY 207
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 40 VAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PHIIELIDAFPHKGNLHLVFEFM 93
VAIK + R+ E N T + E+ LLK++ S +I L+D F + L+ E
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 94 E--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQL 150
E DL I L +S+ L+ + CH VLHRD+K N+LI + G+L
Sbjct: 139 EPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 197
Query: 151 KLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
KL DFG + D +T R Y PE + + +G VW+ G + +++
Sbjct: 198 KLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 34/240 (14%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
E LG G G V+ + G T VA+K ++ G L E L+K+L+ ++ L
Sbjct: 19 ERLGAGQAGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77 IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
A + ++++ E+ME + +P+ IK + L +G+AF +
Sbjct: 74 Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
+ +HRD++ N+L+ K+ADFGLAR+ D T + A++ + APE A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
YG DVW+ G + E++ R P+ G ++ + + + + P P+ Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 21 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
+ G+A+ + K +HR++ N ++ +K+ DFG+ R D R+ +
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
+ APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPNMRPTF 279
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15 LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
L RE LG+G++G+VY+ A D G+ VA+K + +E + F L E ++K
Sbjct: 22 LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 78
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
H++ L+ +V E M DL++ +R+ N P ++ +QM
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
+ G+A+ + K +HR++ N ++ +K+ DFG+ R D R+ +
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
+ APE L + D+W+ G + E+ L +P+ QG S+ L + P
Sbjct: 199 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 256
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
P+ + D + + P +R F
Sbjct: 257 NCPE--RVTDLMRMCWQFNPNMRPTF 280
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKSPHIIELID 78
+G G++G VYK K VA+K +++ F A R E+ +L++ + +I+ L
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPE-QFQAFRNEVAVLRKTRHVNIL-LFM 98
Query: 79 AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
+ K NL +V ++ E + L + + + T +G+ + H K ++HRDM
Sbjct: 99 GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 138 KPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAGV 193
K NN+ + +K+ DFGLA + S ++ + + APE++ +
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 194 DVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
DV++ G + EL+ P+ S I+ +I G S PDL+ L
Sbjct: 219 DVYSYGIVLYELMTGELPY----SHINNRDQIIFMVGRGYAS--PDLSKL 262
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
D LK E LGEG +G V+ A + + VA+K ++ + +F RE +LL
Sbjct: 42 DIVLKWE-LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLT 98
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR----NTNIFLSPADIK------- 114
L+ HI+ L +VFE+M DL +R + + D+
Sbjct: 99 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 115 ---SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTH 170
+ G+ + +HRD+ N L+G +K+ DFG++R I+ + R
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 218
Query: 171 QVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSS 216
+ RW +L+ +++ DVW+ G + E+ ++P+ Q S+
Sbjct: 219 RTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 14/199 (7%)
Query: 19 VLGEGTYGVVYKAIDTKTGQTVAIKKI----RLGKQKEGVNFTALREIKLLKELKS---- 70
+LG+G +G V+ VAIK I LG + T E+ LL ++ +
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 71 PHIIELIDAFPHKGNLHLVFE--FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
P +I L+D F + LV E DL I L + + + + CH
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCH 156
Query: 129 KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
+ V+HRD+K N+LI G KL DFG + D +T R Y PE + +
Sbjct: 157 SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH--DEPYTDFDGTRVYSPPEWISRHQ 214
Query: 188 QYGAGVDVWAAGCIFAELL 206
+ VW+ G + +++
Sbjct: 215 YHALPATVWSLGILLYDMV 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
D LK E LGEG +G V+ A + + VA+K ++ + +F RE +LL
Sbjct: 13 DIVLKWE-LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLT 69
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR----NTNIFLSPADIK------- 114
L+ HI+ L +VFE+M DL +R + + D+
Sbjct: 70 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 115 ---SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTH 170
+ G+ + +HRD+ N L+G +K+ DFG++R I+ + R
Sbjct: 130 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 189
Query: 171 QVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSS 216
+ RW +L+ +++ DVW+ G + E+ ++P+ Q S+
Sbjct: 190 RTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 12 DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
D LK E LGEG +G V+ A + + VA+K ++ + +F RE +LL
Sbjct: 19 DIVLKWE-LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLT 75
Query: 67 ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR----NTNIFLSPADIK------- 114
L+ HI+ L +VFE+M DL +R + + D+
Sbjct: 76 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 115 ---SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTH 170
+ G+ + +HRD+ N L+G +K+ DFG++R I+ + R
Sbjct: 136 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 195
Query: 171 QVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
+ RW +L+ +++ DVW+ G + E+ ++P+ Q S+
Sbjct: 196 RTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 39/292 (13%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-- 75
EV G +G V+KA + VA+K + ++ N E+ L +K +I++
Sbjct: 30 EVKARGRFGCVWKA--QLLNEYVAVKIFPIQDKQSWQNEY---EVYSLPGMKHENILQFI 84
Query: 76 --------------LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
LI AF KG+L +F++ ++ + +I + A +Y+ +
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLS---DFLKANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRA 179
GL HK + HRD+K N+L+ ++ +ADFGLA F G QV R Y A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 180 PELLFGAKQYGAG----VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
PE+L GA + +D++A G + EL +R G D + F Q
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD-----EYMLPF-EEEIGQ 255
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL--DLLSKMFTYDPKARITA 285
P L + + V ++ P LR + + A+ + + + + +D +AR++A
Sbjct: 256 HPSLEDMQEVVVHKK-KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 16/227 (7%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G VYK K VA+K + + E+ +L++ + +I+ L
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 87
Query: 80 FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
+ L +V ++ E + L + + + + T +G+ + H K ++HRD+K
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 139 PNNLLIGSHGQLKLADFGLA--RIFGSPDRRFTHQVFARWYRAPEL--LFGAKQYGAGVD 194
NN+ + +K+ DFGLA + S +F + + APE+ + + Y D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 195 VWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
V+A G + EL+ + P+ S+I+ +I G + S PDL+
Sbjct: 208 VYAFGIVLYELMTGQLPY----SNINNRDQIIEMVGRGSLS--PDLS 248
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKEL 68
D L R +LGEG +G VY+ + T G+ + + ++ K+ ++ + E ++K L
Sbjct: 25 DVVLNR-ILGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
PHI++LI + ++ + +L + L + Y K +A+
Sbjct: 83 DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGA 186
+HRD+ N+L+ S +KL DFGL+R D + ++ +W + F
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF-- 200
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFL 212
+++ DVW E+L+ ++PF
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 21 GEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
GEG +GVVYK T TVA+KK+ + E + +EIK+ + + +++EL+
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 79 AFPHKGNLHLVFEFMET----DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
+L LV+ + D + + T LS Q G+ F H+ +H
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP-LSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGAKQ 188
RD+K N+L+ K++DFGLAR +F V Y APE L G +
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLAR----ASEKFAQXVXXSRIVGTTAYXAPEALRG--E 201
Query: 189 YGAGVDVWAAGCIFAELLNRRP 210
D+++ G + E++ P
Sbjct: 202 ITPKSDIYSFGVVLLEIITGLP 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
+ LG G +G V +A G+ A+ K+ + K + + E+K++ L + +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 IIELIDAFPHKGNLHLVFEFM-------------ETDLETVIRNTNIFLSPADIKSYMQM 119
I+ L+ A H G + ++ E+ E DL+ + L D+ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD---KEDGRPLELRDLLHFSSQ 168
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--- 176
+G+AF K +HRD+ N+L+ + K+ DFGLAR + D + + AR
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARLPVK 227
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE +F Y DVW+ G + E+ +
Sbjct: 228 WMAPESIFDCV-YTVQSDVWSYGILLWEIFS 257
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
LG G +G V+ A K + VA+K ++ G L E ++K L+ +++L A
Sbjct: 190 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKL-HA 244
Query: 80 FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPA-DIKSYMQMTLKGLAFCHKKWVLHRDM 137
K ++++ EFM + L +++ P + + +G+AF ++ +HRD+
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL-FGAKQYGAGVDVW 196
+ N+L+ + K+ADFGLAR+ ++T APE + FG+ + DVW
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGS--FTIKSDVW 353
Query: 197 AAGCIFAELLN--RRPF 211
+ G + E++ R P+
Sbjct: 354 SFGILLMEIVTYGRIPY 370
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKEL 68
D L R +LGEG +G VY+ + T G+ + + ++ K+ ++ + E ++K L
Sbjct: 9 DVVLNR-ILGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
PHI++LI + ++ + +L + L + Y K +A+
Sbjct: 67 DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGA 186
+HRD+ N+L+ S +KL DFGL+R D + ++ +W + F
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF-- 184
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFL 212
+++ DVW E+L+ ++PF
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
E+ G +G V+KA VA+K L ++ ++ + REI +K ++++ I
Sbjct: 21 EIKARGRFGCVWKA--QLMNDFVAVKIFPLQDKQ---SWQSEREIFSTPGMKHENLLQFI 75
Query: 78 DAFPHKGNLH----LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK--W 131
A NL L+ F + T NI ++ ++ + +GL++ H+ W
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI-ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 132 ---------VLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAP 180
+ HRD K N+L+ S LADFGLA F G P QV R Y AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 181 ELLFGAKQYGAG----VDVWAAGCIFAELLNRRPFLQGSSD 217
E+L GA + +D++A G + EL++R G D
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
+ LG G +G V +A G+ A+ K+ + K + + E+K++ L + +
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 73 IIELIDAFPHKGNLHLVFEFM-------------ETDLETVIRNTNIFLSPADIKSYMQM 119
I+ L+ A H G + ++ E+ E DL+ + L D+ +
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD---KEDGRPLELRDLLHFSSQ 160
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--- 176
+G+AF K +HRD+ N+L+ + K+ DFGLAR + D + + AR
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARLPVK 219
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
+ APE +F Y DVW+ G + E+ +
Sbjct: 220 WMAPESIFDCV-YTVQSDVWSYGILLWEIFS 249
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKEL 68
D L R +LGEG +G VY+ + T G+ + + ++ K+ ++ + E ++K L
Sbjct: 13 DVVLNR-ILGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 69 KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
PHI++LI + ++ + +L + L + Y K +A+
Sbjct: 71 DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGA 186
+HRD+ N+L+ S +KL DFGL+R D + ++ +W + F
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF-- 188
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFL 212
+++ DVW E+L+ ++PF
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G VYK K VA+K + + E+ +L++ + +I+ L
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 98
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
+ K L +V ++ E ++ + +I + ++ + + T +G+ + H K ++HRD
Sbjct: 99 YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 156
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
+K NN+ + +K+ DFGLA + S +F + + APE++ + Y
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
DV+A G + EL+ + P+ S+I+ +I G S PDL+
Sbjct: 217 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 259
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 106/212 (50%), Gaps = 11/212 (5%)
Query: 4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK 63
VDL ++ + + + ++G G +G VYK + + G VA+K+ R + +G+ EI+
Sbjct: 32 VDL-EEATNNFDHKFLIGHGVFGKVYKGV-LRDGAKVALKR-RTPESSQGIE-EFETEIE 87
Query: 64 LLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL- 121
L + PH++ LI + + L++++ME +L+ + +++ + +++ +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 122 --KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF--ARWY 177
+GL + H + ++HRD+K N+L+ + K+ DFG+++ D+ V Y
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRR 209
PE F + DV++ G + E+L R
Sbjct: 208 IDPE-YFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G VYK K VA+K + + E+ +L++ + +I+ L
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 99
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
+ K L +V ++ E ++ + +I + ++ + + T +G+ + H K ++HRD
Sbjct: 100 YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
+K NN+ + +K+ DFGLA + S +F + + APE++ + Y
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
DV+A G + EL+ + P+ S+I+ +I G S PDL+
Sbjct: 218 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 260
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G VYK K VA+K + + E+ +L++ + +I+ L
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 76
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
+ K L +V ++ E ++ + +I + ++ + + T +G+ + H K ++HRD
Sbjct: 77 YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
+K NN+ + +K+ DFGLA + S +F + + APE++ + Y
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
DV+A G + EL+ + P+ S+I+ +I G S PDL+
Sbjct: 195 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
+G G++G VYK K VA+K + + E+ +L++ + +I+ L
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 76
Query: 80 FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
+ K L +V ++ E ++ + +I + ++ + + T +G+ + H K ++HRD
Sbjct: 77 YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
+K NN+ + +K+ DFGLA + S +F + + APE++ + Y
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
DV+A G + EL+ + P+ S+I+ +I G S PDL+
Sbjct: 195 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,633,635
Number of Sequences: 62578
Number of extensions: 530902
Number of successful extensions: 4251
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1061
Number of HSP's gapped (non-prelim): 1215
length of query: 415
length of database: 14,973,337
effective HSP length: 101
effective length of query: 314
effective length of database: 8,652,959
effective search space: 2717029126
effective search space used: 2717029126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)