Query 014987
Match_columns 415
No_of_seqs 204 out of 1510
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 04:40:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 5.1E-80 1.7E-84 670.9 32.6 363 1-410 283-834 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 1E-79 3.5E-84 659.4 33.4 373 1-411 297-711 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 2.3E-78 8E-83 651.8 31.2 356 1-409 305-710 (721)
4 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 4.9E-47 1.7E-51 407.8 16.2 235 1-275 359-619 (822)
5 1x38_A Beta-D-glucan exohydrol 100.0 5.4E-45 1.9E-49 385.3 18.5 232 1-270 354-601 (602)
6 3bmx_A Uncharacterized lipopro 100.0 3E-38 1E-42 335.8 13.1 221 1-272 394-640 (642)
7 3sql_A Glycosyl hydrolase fami 98.8 4.3E-09 1.5E-13 108.6 7.3 169 1-213 347-523 (535)
8 3idu_A Uncharacterized protein 97.4 0.00076 2.6E-08 56.4 9.2 50 315-373 34-84 (127)
9 2l0d_A Cell surface protein; s 96.8 0.0044 1.5E-07 50.7 8.4 61 315-397 20-82 (114)
10 2kut_A Uncharacterized protein 96.3 0.0025 8.6E-08 52.8 3.7 54 315-372 17-72 (122)
11 3isy_A Bsupi, intracellular pr 94.1 0.32 1.1E-05 39.9 9.5 68 315-397 19-99 (120)
12 4ep8_B Urease subunit beta; al 92.2 0.25 8.5E-06 38.8 5.5 51 316-370 20-82 (101)
13 2x3c_A Toxic extracellular end 90.0 0.79 2.7E-05 44.5 8.1 22 357-378 95-116 (343)
14 4ubp_B Protein (urease (chain 90.0 0.55 1.9E-05 38.3 5.7 49 316-370 26-88 (126)
15 4ac7_B Urease subunit beta; hy 90.0 0.55 1.9E-05 38.3 5.7 49 316-370 26-88 (126)
16 2e6j_A Hydin protein; PAPD, st 89.8 1.7 5.7E-05 34.4 8.7 61 315-382 27-88 (112)
17 3fsa_A Azurin; copper, cupredo 88.9 0.58 2E-05 38.6 5.3 68 317-398 28-113 (125)
18 2iaa_C Azurin; quinoprotein, t 87.8 0.94 3.2E-05 37.5 6.0 15 358-372 85-99 (128)
19 1w8o_A Bacterial sialidase; 3D 87.4 1.5 5E-05 45.5 8.6 101 258-398 337-439 (601)
20 1yew_A Particulate methane mon 87.0 1.2 4.3E-05 42.9 7.0 54 315-373 265-336 (382)
21 1cuo_A Protein (azurin ISO-2); 85.9 1.5 5E-05 36.3 6.1 15 358-372 86-100 (129)
22 1nwp_A Azurin; electron transp 84.5 1.7 5.8E-05 35.9 5.9 15 358-372 86-100 (128)
23 2ccw_A Azurin II, AZN-2; elect 84.2 1.8 6.2E-05 35.7 6.0 15 358-372 86-100 (129)
24 3qga_A UREA2, fusion of urease 80.3 2.2 7.4E-05 38.2 5.2 48 317-370 126-187 (225)
25 1e9y_A Urease subunit alpha; h 78.8 2.1 7.1E-05 38.7 4.6 49 317-371 126-188 (238)
26 3qbt_B Inositol polyphosphate 74.7 5.1 0.00017 33.4 5.7 55 316-373 45-100 (140)
27 3kmh_A D-lyxose isomerase; cup 74.2 4.2 0.00014 37.1 5.4 43 322-366 131-183 (246)
28 2ys4_A Hydrocephalus-inducing 73.7 6 0.0002 31.9 5.8 57 315-382 42-98 (122)
29 3ay2_A Lipid modified azurin p 72.3 2.9 9.9E-05 36.2 3.7 15 358-372 125-139 (167)
30 3rfr_A PMOB; membrane, oxidore 71.6 6 0.0002 38.6 6.0 53 315-373 299-368 (419)
31 3hrz_B Cobra venom factor; ser 65.9 20 0.00067 32.8 8.2 57 315-373 97-154 (252)
32 3qis_A Inositol polyphosphate 64.9 16 0.00055 35.4 7.8 58 315-376 47-105 (366)
33 1xf1_A C5A peptidase, SCP; hyd 64.4 7.3 0.00025 42.8 5.8 58 315-373 500-564 (926)
34 4gy7_A Urease; JACK bean, hydr 63.1 9.9 0.00034 41.3 6.4 49 316-370 151-213 (840)
35 4dzg_A PLIG; lysozyme inhibito 61.6 11 0.00036 30.3 4.8 42 359-400 36-95 (114)
36 2qsv_A Uncharacterized protein 61.5 29 0.00098 30.9 8.3 51 315-373 135-185 (220)
37 4g9s_B Inhibitor of G-type lys 59.4 32 0.0011 27.1 7.4 12 387-398 78-90 (111)
38 3dnf_A ISPH, LYTB, 4-hydroxy-3 59.2 23 0.00079 33.4 7.4 138 38-212 139-280 (297)
39 4ay0_A Chaperone protein CAF1M 57.6 34 0.0012 30.6 8.0 53 317-373 29-84 (218)
40 2lv4_A Putative outer membrane 57.5 38 0.0013 27.6 7.2 66 346-412 47-134 (146)
41 1qhq_A Protein (auracyanin); e 52.8 44 0.0015 27.1 7.5 26 357-398 98-123 (140)
42 3q48_A Chaperone CUPB2; IG fol 50.5 56 0.0019 30.0 8.4 54 317-372 45-102 (257)
43 2qsv_A Uncharacterized protein 48.7 1.1E+02 0.0038 26.9 10.0 51 316-377 21-72 (220)
44 4b9f_A Cellulosomal-scaffoldin 46.1 11 0.00038 31.9 2.6 35 352-387 94-128 (152)
45 1g43_A Scaffolding protein; be 45.8 7.9 0.00027 33.1 1.7 34 352-386 97-132 (160)
46 4djm_A DRAB; chaperone, PILI; 45.5 66 0.0023 29.1 8.0 52 317-372 39-91 (239)
47 2cal_A Rusticyanin; iron respi 44.5 63 0.0022 27.0 7.2 24 358-398 113-138 (154)
48 3szu_A ISPH, 4-hydroxy-3-methy 43.9 16 0.00056 34.9 3.7 79 114-212 216-296 (328)
49 4hs4_A Chromate reductase; tri 42.3 41 0.0014 29.4 5.9 55 112-177 62-121 (199)
50 3lcm_A SMU.1420, putative oxid 40.9 45 0.0015 28.8 6.0 55 112-177 62-131 (196)
51 2q3z_A Transglutaminase 2; tra 40.9 41 0.0014 35.5 6.4 57 315-373 488-548 (687)
52 2gim_A Plastocyanin; beta shee 40.6 23 0.00077 27.2 3.5 30 354-398 62-91 (106)
53 1iby_A Nitrosocyanin; RED copp 38.2 47 0.0016 25.7 5.1 27 356-398 70-96 (112)
54 3zqx_A Cellulose 1,4-beta-cell 37.9 7.5 0.00026 32.8 0.3 35 352-387 81-116 (146)
55 3p6b_A Cellulose 1,4-beta-cell 37.1 1E+02 0.0036 27.1 7.7 39 317-373 76-114 (205)
56 3zuc_A Cellulosomal scaffoldin 36.9 12 0.00041 31.8 1.4 35 352-387 89-125 (153)
57 1t5b_A Acyl carrier protein ph 36.4 55 0.0019 27.7 5.8 53 115-178 78-145 (201)
58 1vjj_A Protein-glutamine gluta 36.3 59 0.002 34.2 6.8 57 315-373 497-556 (692)
59 2hpv_A FMN-dependent NADH-azor 36.1 40 0.0014 29.1 4.9 37 114-161 85-121 (208)
60 2xwx_A GBPA, glcnac-binding pr 36.1 1.2E+02 0.0041 29.6 8.6 60 315-398 312-371 (391)
61 4h7p_A Malate dehydrogenase; s 35.5 11 0.00039 36.3 1.1 57 118-180 95-155 (345)
62 4fxk_B Complement C4-A alpha c 35.2 46 0.0016 35.4 6.0 55 315-373 169-224 (767)
63 1g0d_A Protein-glutamine gamma 34.6 61 0.0021 34.1 6.5 57 315-373 487-546 (695)
64 1ex0_A Coagulation factor XIII 34.1 61 0.0021 34.3 6.5 57 315-373 532-591 (731)
65 3p0r_A Azoreductase; structura 33.5 47 0.0016 29.1 4.9 54 114-178 83-151 (211)
66 2co7_B SAFB chaperone, putativ 33.2 1.2E+02 0.0042 26.9 7.6 52 317-373 29-82 (221)
67 2hr0_B Complement C3 alpha' ch 32.1 98 0.0033 33.7 8.0 57 315-373 96-154 (915)
68 3vku_A L-LDH, L-lactate dehydr 32.0 26 0.00088 33.4 3.0 57 119-180 72-130 (326)
69 3fvw_A Putative NAD(P)H-depend 31.3 86 0.0029 26.9 6.2 39 112-161 56-94 (192)
70 1rli_A Trp repressor binding p 31.2 70 0.0024 26.7 5.5 53 113-176 61-126 (184)
71 2x0j_A Malate dehydrogenase; o 30.5 12 0.00042 35.2 0.4 57 119-180 65-123 (294)
72 3ha2_A NADPH-quinone reductase 30.5 87 0.003 26.7 6.0 57 111-178 39-105 (177)
73 3e9t_A Na/Ca exchange protein; 30.4 1.5E+02 0.0053 23.1 7.1 52 317-373 20-76 (114)
74 3cvb_A Plastocyanin; cupredoxi 29.6 70 0.0024 24.1 4.7 19 354-372 61-79 (105)
75 3u7i_A FMN-dependent NADH-azor 29.2 68 0.0023 28.5 5.2 54 114-178 85-154 (223)
76 5mdh_A Malate dehydrogenase; o 29.0 38 0.0013 32.3 3.6 57 118-180 74-134 (333)
77 2pn5_A TEP1R, thioester-contai 28.8 1.5E+02 0.0051 33.6 9.1 62 315-377 681-744 (1325)
78 4acq_A Alpha-2-macroglobulin; 28.6 1.1E+02 0.0037 35.3 7.9 55 315-373 784-839 (1451)
79 3gfu_C Chaperone protein FAEE; 28.6 2E+02 0.007 25.6 8.3 52 317-372 17-71 (224)
80 1rtt_A Conserved hypothetical 28.3 53 0.0018 28.0 4.2 54 112-176 61-119 (193)
81 3svl_A Protein YIEF; E. coli C 28.1 1.1E+02 0.0036 26.4 6.2 39 112-161 61-99 (193)
82 3ldh_A Lactate dehydrogenase; 28.0 26 0.00088 33.6 2.2 54 120-180 86-143 (330)
83 2xg5_A PAPD, chaperone protein 27.8 1.5E+02 0.005 26.3 7.1 52 317-372 17-72 (218)
84 1l4i_A SFAE protein; periplasm 27.8 1.4E+02 0.0048 26.1 7.0 51 317-370 17-68 (206)
85 1klf_A FIMC chaperone, chapero 27.7 1.4E+02 0.0047 26.2 6.9 52 317-371 17-69 (205)
86 3fso_A Integrin beta-4, GP150; 27.5 1.7E+02 0.0057 23.3 6.8 51 317-372 23-78 (123)
87 3f2v_A General stress protein 27.2 76 0.0026 27.5 5.0 56 112-178 47-113 (192)
88 7mdh_A Protein (malate dehydro 27.0 19 0.00066 35.1 1.1 57 118-180 103-163 (375)
89 1oju_A MDH, malate dehydrogena 26.7 16 0.00053 34.4 0.4 57 119-180 65-123 (294)
90 2l8a_A Endoglucanase; carbohyd 26.6 12 0.00042 31.5 -0.3 36 352-388 86-122 (149)
91 3ead_A Na/Ca exchange protein; 26.6 2.5E+02 0.0086 22.6 8.0 52 317-373 22-78 (137)
92 2aan_A Auracyanin A; cupredoxi 25.8 49 0.0017 26.8 3.3 26 357-398 99-124 (139)
93 3pqe_A L-LDH, L-lactate dehydr 25.5 17 0.00059 34.7 0.5 57 119-180 69-127 (326)
94 3nep_X Malate dehydrogenase; h 24.5 17 0.00059 34.5 0.3 57 119-180 65-123 (314)
95 3hhp_A Malate dehydrogenase; M 24.5 18 0.00061 34.3 0.4 58 118-180 64-123 (312)
96 3tl2_A Malate dehydrogenase; c 24.5 16 0.00056 34.6 0.1 57 119-180 74-132 (315)
97 3k1y_A Oxidoreductase; structu 24.1 79 0.0027 27.3 4.6 51 112-173 74-126 (191)
98 3prx_B Cobra venom factor; imm 24.1 1.5E+02 0.0051 34.6 8.0 60 315-377 829-889 (1642)
99 3tem_A Ribosyldihydronicotinam 23.8 1.1E+02 0.0038 27.1 5.6 55 112-177 81-150 (228)
100 1d4a_A DT-diaphorase, quinone 23.3 1.1E+02 0.0039 27.8 5.7 55 112-177 82-151 (273)
101 4aj2_A L-lactate dehydrogenase 23.0 21 0.00073 34.1 0.6 54 120-180 84-141 (331)
102 1sqs_A Conserved hypothetical 22.9 1.1E+02 0.0036 27.2 5.3 55 112-177 68-128 (242)
103 2amj_A Modulator of drug activ 22.2 1.9E+02 0.0066 24.8 6.8 39 112-161 59-97 (204)
104 1iuz_A Plastocyanin; electron 21.8 69 0.0024 24.0 3.3 27 354-398 58-84 (98)
105 1ez4_A Lactate dehydrogenase; 21.7 36 0.0012 32.2 1.9 55 119-180 68-126 (318)
106 3vmn_A Dextranase; TIM barrel, 21.0 1.2E+02 0.004 31.7 5.6 55 315-377 23-82 (643)
107 3fn9_A Putative beta-galactosi 20.1 2.3E+02 0.008 29.7 8.0 62 315-381 188-249 (692)
108 1bxv_A Plastocyanin; copper pr 20.1 77 0.0026 23.1 3.2 27 354-398 51-77 (91)
109 3r6w_A FMN-dependent NADH-azor 20.1 1.4E+02 0.0049 25.6 5.5 36 114-160 78-113 (212)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=5.1e-80 Score=670.86 Aligned_cols=363 Identities=30% Similarity=0.441 Sum_probs=303.0
Q ss_pred CccC----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCeEEEecCCCCCCCcCCCCCeEEEEccCCCcccccccc
Q 014987 1 MRLG----MFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGN 76 (415)
Q Consensus 1 ~~lG----lfd~~p~~~~~~~~~~~~v~~~~h~~la~~~a~esivLLKN~~~~LPL~~~~~~~V~viG~~a~~~~~~~G~ 76 (415)
||+| +|| +|+.++ ....+++++|+++|+++|++|||||||++++|||++ .++|+||||+++....++|+
T Consensus 283 ~~~g~l~~~~~-~p~~~~----~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Ggg 355 (845)
T 3abz_A 283 KFVVDNLEKTG-IVENGP----ESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGG 355 (845)
T ss_dssp HHHHHTHHHHC-CCTTCC----CCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBS
T ss_pred HHhCCcccccc-CCccCc----cccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCC
Confidence 4678 899 665332 123488999999999999999999999999999985 36999999999987766655
Q ss_pred cc-cCCCcccCHHHHHhhhcc--eeeeeccCcc------------------------------------c----------
Q 014987 77 YA-GVACGYTTPLQGISRYAK--TIHQAGCFGV------------------------------------A---------- 107 (415)
Q Consensus 77 ~~-g~~~~~~t~~~~l~~~~~--~~~~~g~~~~------------------------------------~---------- 107 (415)
++ ..+.+.++++++|+++.. +.|..||... .
T Consensus 356 s~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 435 (845)
T 3abz_A 356 SASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVT 435 (845)
T ss_dssp TTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEE
T ss_pred ccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeee
Confidence 54 356788999999987632 3444433100 0
Q ss_pred --------------------------------------------------------------------------------
Q 014987 108 -------------------------------------------------------------------------------- 107 (415)
Q Consensus 108 -------------------------------------------------------------------------------- 107 (415)
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~ 515 (845)
T 3abz_A 436 KVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKER 515 (845)
T ss_dssp EECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCE
T ss_pred eccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccc
Confidence
Q ss_pred -----------------c------------------------CC-ccchHHHHHHhhcCCEEEEEcCCCcccccccCCCC
Q 014987 108 -----------------C------------------------NG-NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRA 145 (415)
Q Consensus 108 -----------------~------------------------~~-~~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~ 145 (415)
. .+ ...+++|+++|+++|+|||++|.+..+|+|+.||.
T Consensus 516 ~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~ 595 (845)
T 3abz_A 516 TKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRE 595 (845)
T ss_dssp EEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCS
T ss_pred eeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcc
Confidence 0 00 01256778899999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHhhCCCCEEEEEECCceeeccCcCCCCCccEEEeccCCChhHHHHHHHHhhcCCCCCccCCeeec
Q 014987 146 GLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWY 225 (415)
Q Consensus 146 ~l~l~~~q~~li~~la~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~~g~~~g~AladvL~G~~nPsGkLPvT~~ 225 (415)
+|.||+.|.+||+++++. ++|||||+++|+|++|+|+ ++++|||++|+|||++|+|+||||||++|||||||+||
T Consensus 596 ~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~---~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~- 670 (845)
T 3abz_A 596 NMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWL---EDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW- 670 (845)
T ss_dssp SSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTG---GGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB-
T ss_pred cccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcch---hccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee-
Confidence 999999999999999974 6899999999999999987 48999999999999999999999999999999999997
Q ss_pred cccccCCCCccc-ccccc-cCCCCC---cccccCC---CCcccccCcCCCCCCeeec--ccccCCCcccccccccccccc
Q 014987 226 PQDYVSRLPMTD-MRMRA-ARGYPG---RTYRFYK---GPVVFPFGHGMSYTTFAHT--LSKAPNQFSVPIATSLYAFKN 295 (415)
Q Consensus 226 p~~~~~~~p~~~-~~~~~-~~~~~~---~~Yr~~~---~~~lypFG~GLSYt~F~ys--~~~~~~~~~~~~~~~~~~~~~ 295 (415)
|++. +++|.++ +.... ...|.+ .+||||+ .+|+||||||||||||+|+ ++++.
T Consensus 671 p~~~-~d~P~~~~~~~~~g~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~---------------- 733 (845)
T 3abz_A 671 PFKL-QDNPAFLNFKTEFGRVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT---------------- 733 (845)
T ss_dssp CSSG-GGSTTTTSCSCBTTEEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC----------------
T ss_pred eCch-hhCCccccCCCCCCceeccCCccCCCcchhcCCCceeecccCCCcceeEEEeccccccc----------------
Confidence 8887 7788542 21100 111221 3699997 5899999999999999999 98741
Q ss_pred ccccccceeccccCCCCceeEEEEEEEEeCC-CCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEeC-
Q 014987 296 TTISSNAIRVAHTNCNDAMSLGLHVDIKNTG-DMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH- 372 (415)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~vsv~V~NtG-~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~~- 372 (415)
+ . .++|+|+||||| +++|+||||||+++|.++ .+|.|+|+||+||.|+||||++|+|+|+
T Consensus 734 -----------~-----~-~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 796 (845)
T 3abz_A 734 -----------D-----D-KIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLEL 796 (845)
T ss_dssp -----------S-----S-EEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEH
T ss_pred -----------C-----C-eEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEEEEEeCC
Confidence 1 1 589999999999 999999999999999887 8999999999999999999999999999
Q ss_pred CCCCeeEEeCC-CCEEecCeEEEEEEeCCCceEEEEEEe
Q 014987 373 VCKHLSVVDKF-GIRRIPMGEHSLHIGDLKHSISLQANL 410 (415)
Q Consensus 373 ~~~~ls~~d~~-~~~~~~~G~~~~~vg~~~~~~~~~~~~ 410 (415)
. ++|++||.. +.|++++|+|+|+||.||++++++..+
T Consensus 797 ~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l~~~~ 834 (845)
T 3abz_A 797 K-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILSVKEF 834 (845)
T ss_dssp H-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEEEEEE
T ss_pred h-HHeeEEecCCCeEEEcCCEEEEEEECCCCCceeEEEE
Confidence 8 899999996 789999999999999999998876544
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=1e-79 Score=659.41 Aligned_cols=373 Identities=25% Similarity=0.361 Sum_probs=293.4
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCeEEEecCCCCCCCcCCCCCeEEEEccCCCccc---------
Q 014987 1 MRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTV--------- 71 (415)
Q Consensus 1 ~~lGlfd~~p~~~~~~~~~~~~v~~~~h~~la~~~a~esivLLKN~~~~LPL~~~~~~~V~viG~~a~~~~--------- 71 (415)
|++|+|| +++..+ .. ....+++|+++|+++|++|||||||++++|||++. ++|+|||++++...
T Consensus 297 ~~lg~~~-~~~~~~--~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~~~~~~~ 369 (713)
T 3zyz_A 297 YLTGQDQ-AGYPSF--NI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHARNSPSCN 369 (713)
T ss_dssp HHTTTTS-TTCCCC--CT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTTTCTTSG
T ss_pred HHhCCcc-cCCCCc--cc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCcccccccccccccc
Confidence 5799998 554221 11 12247899999999999999999999899999864 79999999986421
Q ss_pred --------cccccccc--CCCcccCHHHHHhhhcc-----eeeeeccCccccCCccchHHHHHHhhcCCEEEEEcCCCcc
Q 014987 72 --------TMIGNYAG--VACGYTTPLQGISRYAK-----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQS 136 (415)
Q Consensus 72 --------~~~G~~~g--~~~~~~t~~~~l~~~~~-----~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~ 136 (415)
...|.+++ .+++.++++++|+++.. +.+.. ...+++++++++++|+|||++|..
T Consensus 370 ~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~---------~~~~~~a~~~A~~aDv~Iv~vg~~-- 438 (713)
T 3zyz_A 370 DKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSN---------TDNTSSGASAARGKDVAIVFITAD-- 438 (713)
T ss_dssp GGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEEC---------SCCHHHHHHHHTTCSEEEEEEEEC--
T ss_pred ccccccCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeC---------CccHHHHHHHhhcCCEEEEEeccc--
Confidence 01122232 45678899999998642 22211 235788999999999999999854
Q ss_pred cccccC--------CCCCCCCChhhHHHHHHHHhhCCCCEEEEEECCceeec-cCcCCCCCccEEEeccCCChhHHHHHH
Q 014987 137 IEAEFI--------DRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIA 207 (415)
Q Consensus 137 ~e~eg~--------dr~~l~l~~~q~~li~~la~~~~~pvVvVl~~g~P~~l-~~~~~~~~v~Ail~a~~~g~~~g~Ala 207 (415)
++|+. ||.+|.||..|.+||+++++. ++|||||+++|+|++| +|+ +.++++|||++|+||+++|+|+|
T Consensus 439 -~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~aw~pGqegG~AiA 515 (713)
T 3zyz_A 439 -SGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWAGLPSQESGNALV 515 (713)
T ss_dssp -CBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEECCCCGGGHHHHHH
T ss_pred -CCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEcCCCCchhhheeh
Confidence 45555 999999999999999999974 6899999999999999 565 34689999999999999999999
Q ss_pred HHhhcCCCCCccCCeeeccccccCCCCcccccccccCCCCC---cccccCCC---CcccccCcCCCCCCeeecccccCCC
Q 014987 208 DVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPG---RTYRFYKG---PVVFPFGHGMSYTTFAHTLSKAPNQ 281 (415)
Q Consensus 208 dvL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~---~~Yr~~~~---~~lypFG~GLSYt~F~ys~~~~~~~ 281 (415)
|||||++|||||||+|| |++. +|+|... +..+...|.+ ++||||+. +|+||||||||||||+|++++++..
T Consensus 516 dvL~G~~nPSGkLP~T~-p~~~-~d~p~~~-~~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF~ys~l~~~~~ 592 (713)
T 3zyz_A 516 DVLWGDVSPSGKLVYTI-AKSP-NDYNTRI-VSGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKFNYSRLSVLST 592 (713)
T ss_dssp HHHTTSSCCCCCCSSCB-CSCG-GGSSCCC-CCSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCEEEEEEEEEEC
T ss_pred hhhcCCcCCCccCccee-cCCh-hhCCCcc-ccCCccccCCCCccCceeccCCCCceeecCCCCCCcccEEEeeeEeccc
Confidence 99999999999999997 8876 6777321 1111113332 58999985 7999999999999999999987531
Q ss_pred ccccccccccccccccccccceecc-ccCCCCceeEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeee
Q 014987 282 FSVPIATSLYAFKNTTISSNAIRVA-HTNCNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHV 359 (415)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l 359 (415)
.. ... .. .....+ ...+.+. .++|+|+|||||+++|+||||||+++|.++ .+|.|+|+||+||.|
T Consensus 593 ~~---~~~--------~~-~~~~~gg~~~~~~~-~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L 659 (713)
T 3zyz_A 593 AK---SGP--------AT-GAVVPGGPSDLFQN-VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL 659 (713)
T ss_dssp CC---CEE--------CC-SCEETTEETTTTSE-EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE
T ss_pred cc---cCc--------cc-ccccccccccccCC-eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee
Confidence 00 000 00 000000 0001122 699999999999999999999999999887 899999999999999
Q ss_pred CCCCEEEEEEEeCCCCCeeEEeCC-CCEEecCeEEEEEEeCCCceEEEEEEec
Q 014987 360 TAGALQSVRLDIHVCKHLSVVDKF-GIRRIPMGEHSLHIGDLKHSISLQANLE 411 (415)
Q Consensus 360 ~pGes~~V~~~~~~~~~ls~~d~~-~~~~~~~G~~~~~vg~~~~~~~~~~~~~ 411 (415)
+||||++|+|+|+. ++|++||.. +.|++++|+|+|+||.||++++++..++
T Consensus 660 ~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l~~~~~ 711 (713)
T 3zyz_A 660 TPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRLTSTLS 711 (713)
T ss_dssp CTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEEEEEEE
T ss_pred CCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCcceeEEEE
Confidence 99999999999998 999999986 6899999999999999999999877653
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=2.3e-78 Score=651.83 Aligned_cols=356 Identities=28% Similarity=0.396 Sum_probs=295.0
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCeEEEecCCCCCCCcCCCCCeEEEEccCCCccccccc-cccc
Q 014987 1 MRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIG-NYAG 79 (415)
Q Consensus 1 ~~lGlfd~~p~~~~~~~~~~~~v~~~~h~~la~~~a~esivLLKN~~~~LPL~~~~~~~V~viG~~a~~~~~~~G-~~~g 79 (415)
|++|||| +|+ + ...+++++|+++|+++|+||||||||++ +|||++. +||+|||++++....+++ ++..
T Consensus 305 ~~~gl~~-~~~--~-----~~~~~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~ 373 (721)
T 2x41_A 305 VNAPSFK-NYR--Y-----SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTGQIETIKGGTGSGDT 373 (721)
T ss_dssp TTSGGGG-TCC--C-----CSCCCHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEESGGGTSCCCSCBSTTCC
T ss_pred HHhCCCC-CCC--c-----ccccCCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEecCCcCccccCCCCCCc
Confidence 6899999 553 1 2357889999999999999999999998 9999864 699999999987654332 2233
Q ss_pred CCCcccCHHHHHhhh-cc------eeee-------------ec---cCcc--ccCCccch--HHHHHHhhcCCEEEEEcC
Q 014987 80 VACGYTTPLQGISRY-AK------TIHQ-------------AG---CFGV--ACNGNQLI--GAAEVAARQADATVLVMG 132 (415)
Q Consensus 80 ~~~~~~t~~~~l~~~-~~------~~~~-------------~g---~~~~--~~~~~~~~--~~a~~~a~~aD~vIv~~g 132 (415)
.+.+.++++++|+++ +. +.|. .| +... ...+...+ ++++++++++|+|||++|
T Consensus 374 ~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg 453 (721)
T 2x41_A 374 HPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVIS 453 (721)
T ss_dssp CCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEE
T ss_pred CcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEe
Confidence 566789999999987 43 2344 33 2100 01223445 788899999999999999
Q ss_pred CCcccccccCCCC----CCCCChhhHHHHHHHH----hhCCCCEEEEEECCceeec-cCcCCCCCccEEEeccCCChhHH
Q 014987 133 LDQSIEAEFIDRA----GLLLPGRQQELVSRVA----KASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGG 203 (415)
Q Consensus 133 ~~~~~e~eg~dr~----~l~l~~~q~~li~~la----~~~~~pvVvVl~~g~P~~l-~~~~~~~~v~Ail~a~~~g~~~g 203 (415)
.+ ++|+.||. ++.||..|.+||++++ + .++|||||+++|+||+| .|+ ++++|||++|++|+++|
T Consensus 454 ~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~---~~v~AiL~a~~pG~egg 526 (721)
T 2x41_A 454 RI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWR---DLVDGILLVWQAGQETG 526 (721)
T ss_dssp CC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTG---GGCSEEEECCCCGGGHH
T ss_pred cc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchh---hcCCEEEEcCCCchhHH
Confidence 76 68999999 9999999999999998 6 56899999999999999 665 68999999999999999
Q ss_pred HHHHHHhhcCCCCCccCCeeeccccccCCCCccccccccc-----CCCCC---cccccCC---CCcccccCcCCCCCCee
Q 014987 204 AAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAA-----RGYPG---RTYRFYK---GPVVFPFGHGMSYTTFA 272 (415)
Q Consensus 204 ~AladvL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~-----~~~~~---~~Yr~~~---~~~lypFG~GLSYt~F~ 272 (415)
+|+||+|||++|||||||+|| |++. +++|..++..... ..|.+ .+||||+ .+|+||||||||||||+
T Consensus 527 ~AlAdVL~G~vnPSGkLPvT~-p~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~~~~~plypFG~GLSYTtF~ 604 (721)
T 2x41_A 527 RIVADVLTGRINPSGKLPTTF-PRDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFE 604 (721)
T ss_dssp HHHHHHHHTSSCCCCCCSSCE-ESSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHHHTCCEEECTTCCBCSSCEE
T ss_pred HHHHHHHcCCCCCCCCCceee-cCcc-ccCccccCCCCCccccccccccCCcccccceeecCCCceeeccCCCCCcceeE
Confidence 999999999999999999997 8887 7788622221111 11321 3799997 47999999999999999
Q ss_pred ecccccCCCccccccccccccccccccccceeccccCCCCceeEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCcccee
Q 014987 273 HTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQL 351 (415)
Q Consensus 273 ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L 351 (415)
|+++++.. . +. .++|+|+|||||+++|+||||||+++|.++ .+|.|+|
T Consensus 605 ys~~~~~~-------------------------~-----~~-~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L 653 (721)
T 2x41_A 605 YSDLNVSF-------------------------D-----GE-TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQEL 653 (721)
T ss_dssp EEEEEEEE-------------------------C-----SS-EEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEE
T ss_pred eeceEeec-------------------------C-----CC-eEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHh
Confidence 99988531 1 11 699999999999999999999999999887 8999999
Q ss_pred ccccee-eeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEeCCCceEEEEEE
Q 014987 352 IGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQAN 409 (415)
Q Consensus 352 ~gF~kv-~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg~~~~~~~~~~~ 409 (415)
+||+|| .|+||||++|+|+|+. ++|++|| .+.|++++|+|+|+||.||++++++..
T Consensus 654 ~gF~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~~~~~ 710 (721)
T 2x41_A 654 KAFHKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVGASSRNIKLKGT 710 (721)
T ss_dssp EEEEECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEEEETTEEEEEEE
T ss_pred hcccccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEECCCCCcceEEE
Confidence 999999 9999999999999999 9999999 999999999999999999999876543
No 4
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=4.9e-47 Score=407.79 Aligned_cols=235 Identities=23% Similarity=0.361 Sum_probs=189.6
Q ss_pred CccCCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHhCeEEEecCCCCCCCcCCCCCeEEEEccCCCcccccccccc
Q 014987 1 MRLGMFDGEPSA--QPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYA 78 (415)
Q Consensus 1 ~~lGlfd~~p~~--~~~~~~~~~~v~~~~h~~la~~~a~esivLLKN~~~~LPL~~~~~~~V~viG~~a~~~~~~~G~~~ 78 (415)
||+|||| +|+. .++.. ....+++++|+++|+++|++|||||||++++|||++. ++|+|||+++++...+.|+|+
T Consensus 359 ~~lGLfd-~p~~~~~~~~~-~~~~v~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws 434 (822)
T 3rrx_A 359 IRWGVFT-KSKPSARPESQ-HPQWLGAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWS 434 (822)
T ss_dssp HHHTTTT-SCCGGGSGGGS-CGGGTTCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSS
T ss_pred HHcCCCC-CCCcccccccc-cccccCCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcc
Confidence 5799999 6652 22221 1346899999999999999999999999889999864 699999999998766667653
Q ss_pred ----cC------CCcccCHHHHHhhhcc-----eeeeeccCccccCCccchHHHHHHhhcCCEEEEEcCCCcccccccCC
Q 014987 79 ----GV------ACGYTTPLQGISRYAK-----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFID 143 (415)
Q Consensus 79 ----g~------~~~~~t~~~~l~~~~~-----~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~d 143 (415)
|. .++.++++++|+++.. +.|... .+.++++|++||++|+..+.|+++ |
T Consensus 435 ~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~~~~~---------------~~~a~~aDv~Iv~~Ge~~~~e~~g-D 498 (822)
T 3rrx_A 435 VSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSES---------------GEYTSKPDVAIVVIGEEPYAEWFG-D 498 (822)
T ss_dssp SSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEEECTT---------------CCCSSCCSEEEEEEECCCCCGGGG-C
T ss_pred eeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEEEccc---------------ccccccCCeEEEEecCCcccccCC-C
Confidence 21 2467899999998642 222210 023678999999999888777766 8
Q ss_pred CCCCCCC---hhhHHHHHHHHhhCCCCEEEEEECCceeeccCcCCCCCccEEEeccCCChhHHHHHHHHhhcCC------
Q 014987 144 RAGLLLP---GRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRA------ 214 (415)
Q Consensus 144 r~~l~l~---~~q~~li~~la~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~~g~~~g~AladvL~G~~------ 214 (415)
|.+|.|| +.|.+||+++++ .++|||||+++|+|+.|.++. ++++|||++|+||++++ |+||||||++
T Consensus 499 r~~L~lp~g~~~q~~Li~av~a-~g~pvVvVl~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~ 574 (822)
T 3rrx_A 499 IELLEFQHETKHALALLKQLKA-DNIPVVTVFLSGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQF 574 (822)
T ss_dssp CSCCBTTTTTCHHHHHHHHHHH-TTCCEEEEEECSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSC
T ss_pred cccccCCCCChHHHHHHHHHHH-hCCCEEEEEeCCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhccccccccc
Confidence 9999999 579999999986 679999999999999997654 57999999999999986 9999999987
Q ss_pred CCCccCCeeeccccccCCCCcccccccccCCCCCcccccCCCCcccccCcCCCCCCeeecc
Q 014987 215 NPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFAHTL 275 (415)
Q Consensus 215 nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~lypFG~GLSYt~F~ys~ 275 (415)
|||||||+|| |++. +|+|+... +.+| +|+||||||||||+|+|..
T Consensus 575 nPSGkLP~T~-P~~~-~q~P~~~~------------~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 575 DFTGKLSFSW-PKYD-DQFTLNLN------------DADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp CCCCCCSSCB-CSST-TCTTCCTT------------CSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred CCCCCCceec-cCCc-ccCCcccC------------CCCC--ccccCCCCCcCCCCCcccc
Confidence 9999999997 9887 88985211 1112 8999999999999999865
No 5
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=5.4e-45 Score=385.27 Aligned_cols=232 Identities=25% Similarity=0.368 Sum_probs=189.1
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCeEEEecCC--C---CCCCcCCCCCeEEEEccCCCccccccc
Q 014987 1 MRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSA--R---TLPLSTLRHHTVAVIGPNSDVTVTMIG 75 (415)
Q Consensus 1 ~~lGlfd~~p~~~~~~~~~~~~v~~~~h~~la~~~a~esivLLKN~~--~---~LPL~~~~~~~V~viG~~a~~~~~~~G 75 (415)
|++|||| +|+.++- ....+++++|+++|+++|++|||||||++ + +|||+++ .++|+|||++++....++|
T Consensus 354 ~~~glf~-~p~~~~~---~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~g 428 (602)
T 1x38_A 354 FTMGLFE-NPYADPA---MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCG 428 (602)
T ss_dssp HHTTTTT-CCSCCGG---GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHC
T ss_pred HHhCCCC-CCCCCcc---hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCC
Confidence 5799999 7763321 12468899999999999999999999997 5 9999864 4799999999987655556
Q ss_pred ccc-------cCCCcccCHHHHHhhhcc----eeeeeccCccccCCccchHHHHHHhhcCCEEEEEcCCCcccccccCCC
Q 014987 76 NYA-------GVACGYTTPLQGISRYAK----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDR 144 (415)
Q Consensus 76 ~~~-------g~~~~~~t~~~~l~~~~~----~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr 144 (415)
+|+ +.....++++++|+++.. +.|..++. . .+. +++++|+|||++|.....++|+ ||
T Consensus 429 g~~~~~~g~~~~~~~~~t~~~~l~~~~~~~~~v~~~~~~~---------~-~~~-~a~~aD~viv~~g~~~~~e~~g-dr 496 (602)
T 1x38_A 429 GWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPD---------A-EFV-KSGGFSYAIVAVGEHPYTETKG-DN 496 (602)
T ss_dssp SSSSSTTCCSSCCSSCBCHHHHHHHHSCTTCEEEEESSCC---------H-HHH-HHTTCSCEEEEEECCCCCGGGG-CC
T ss_pred cceeeccCCCCCCCCcccHHHHHHHHhCCCeEEEEcCCCC---------H-HHH-HHhhCCEEEEEeccCcccccCC-Cc
Confidence 553 123456899999998632 44554431 1 122 3889999999999888788888 99
Q ss_pred CCCCCChhhHHHHHHHHhhCCCCEEEEEECCceeeccCcCCCCCccEEEeccCCChhHHHHHHHHhhcCCCCCccCCeee
Q 014987 145 AGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTW 224 (415)
Q Consensus 145 ~~l~l~~~q~~li~~la~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~~g~~~g~AladvL~G~~nPsGkLPvT~ 224 (415)
.++.||..|.+||+++++ ++|||||+++|+||+|.++. ++++|||++|+||+++ +|+||+|||++|||||||+||
T Consensus 497 ~~l~lp~~q~~li~~v~~--~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~ 571 (602)
T 1x38_A 497 LNLTIPEPGLSTVQAVCG--GVRCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW 571 (602)
T ss_dssp SSCCCCSSSHHHHHHHHT--TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB
T ss_pred CCcCCChhHHHHHHHHHh--CCCEEEEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc
Confidence 999999999999999985 68999999999999996543 6899999999999997 999999999999999999997
Q ss_pred ccccccCCCCcccccccccCCCCCcccccCCCCcccccCcCCCCCC
Q 014987 225 YPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTT 270 (415)
Q Consensus 225 ~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~lypFG~GLSYt~ 270 (415)
|++. +++|.+ .+||||+ |+||||||||||+
T Consensus 572 -p~~~-~~~p~~------------~g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 572 -FKSV-DQLPMN------------VGDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp -CSCG-GGCSCC------------TTCSSCC--CSBCTTCCBCCCC
T ss_pred -cCcc-ccCCcc------------CCCCCCC--ccCcCCCCcCCCC
Confidence 8876 777742 1478875 9999999999996
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=3e-38 Score=335.81 Aligned_cols=221 Identities=19% Similarity=0.211 Sum_probs=164.1
Q ss_pred CccCCCCCC-CCCCCCC--CCCCCCCCCHHHHHHHHHHHHhCeEEEecCCCCCCCcCCCCCeEEEEccCCCccccccccc
Q 014987 1 MRLGMFDGE-PSAQPFG--NLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNY 77 (415)
Q Consensus 1 ~~lGlfd~~-p~~~~~~--~~~~~~v~~~~h~~la~~~a~esivLLKN~~~~LPL~~~~~~~V~viG~~a~~~~~~~G~~ 77 (415)
|++|||| + |+.+... ......+++++|+++++++|++|||||||++++|||++++.++|+|||+++..
T Consensus 394 ~~~gl~~-~~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~-------- 464 (642)
T 3bmx_A 394 IKRGMYP-ARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ-------- 464 (642)
T ss_dssp HHTTCSS-CCCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH--------
T ss_pred HHcCCCc-CCCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc--------
Confidence 5789999 5 5522000 00023578999999999999999999999988999986555799999997432
Q ss_pred ccCCCcccCHHHHHhhhc---ceeeeeccCccccCCccchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhh-
Q 014987 78 AGVACGYTTPLQGISRYA---KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ- 153 (415)
Q Consensus 78 ~g~~~~~~t~~~~l~~~~---~~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q- 153 (415)
..+++++|+++. ...+..++.. ...+...++++++.++++|+|||+++....... .++.++..|
T Consensus 465 ------~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~-----e~~~l~~~q~ 532 (642)
T 3bmx_A 465 ------TASIEQTIHDLIKRKKIKPVSLSKM-NFASQVFKTEHEKQVKEADYIITGSYVVKNDPV-----VNDGVIDDTI 532 (642)
T ss_dssp ------HHHHHHHHHHHHHTTSSCCCEEEEE-ECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCC-----EETTEECCCC
T ss_pred ------hhhHHHHHHHhhCCCCeeEEeccCC-CCcchhhHHHHHHHHhhCCEEEEEecCCCCCch-----hccCCccccc
Confidence 256888998764 2222222210 111124567889999999999996543211111 134455566
Q ss_pred -----------HHHHHHHHhhCCCCEEEEEECCceeeccCcCCCCCccEEEeccCC--------ChhHHHHHHHHhhcCC
Q 014987 154 -----------QELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP--------GQAGGAAIADVLFGRA 214 (415)
Q Consensus 154 -----------~~li~~la~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~~--------g~~~g~AladvL~G~~ 214 (415)
.+||+++++ .++|||||+ +|+||++.|+ ++++|||++|++ |+++++|+||+|||++
T Consensus 533 ~~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~---~~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~ 607 (642)
T 3bmx_A 533 SDSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANF---EEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQA 607 (642)
T ss_dssp CSSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGC---TTCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSS
T ss_pred cccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhccccc---cccCeEEEEccCcccccccccchHHHHHHHHHcCCC
Confidence 899999976 678988776 5999999998 469999999999 7999999999999999
Q ss_pred CCCccCCeeeccccccCCCCcccccccccCCCCCcccccCCCCcccccCcCCCCCCee
Q 014987 215 NPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFA 272 (415)
Q Consensus 215 nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~lypFG~GLSYt~F~ 272 (415)
|||||||+|| |++. . + ..|+||||||||||+|.
T Consensus 608 nPsGkLPvt~-p~~~---~-------------~--------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 608 KPKGTLPVDI-PSVT---K-------------P--------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp CCCCCCSSCE-ECSS---S-------------T--------TSEEECTTCCBCTTTCS
T ss_pred CCCccCceee-eccC---C-------------C--------CCcccCCCCCccCCCCC
Confidence 9999999998 6542 1 1 27899999999999984
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=98.81 E-value=4.3e-09 Score=108.65 Aligned_cols=169 Identities=10% Similarity=0.023 Sum_probs=99.4
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCeEEEecCCCCCCCc----CCCCCeEEEEccCCCcccccccc
Q 014987 1 MRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLS----TLRHHTVAVIGPNSDVTVTMIGN 76 (415)
Q Consensus 1 ~~lGlfd~~p~~~~~~~~~~~~v~~~~h~~la~~~a~esivLLKN~~~~LPL~----~~~~~~V~viG~~a~~~~~~~G~ 76 (415)
||+|+|+ ++... . ...+++++|+++|+++|++|||| +++|||+ +++.++|+|||++++...
T Consensus 347 ~~lGl~~-~~~~~----~-~~~~~~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~~~~~~laVIG~~a~~~~----- 411 (535)
T 3sql_A 347 QKILTAT-PSTFP----Q-GISGDRPETRKTVAMVLERATKH----QKSLVKISSFPDNFARNLIVVDSVLKSPF----- 411 (535)
T ss_dssp HHHHTSC-CCCTT----T-TCCTTCHHHHHHHHHHHHHHCEE----CSSCCCCCCCSTTSEEEEEEESCGGGCTT-----
T ss_pred HHhcCCC-CCccc----h-hhccCCHHHHHHHHHHHHhCeEE----CCcCCCCcccccCCCCEEEEECCCCCCcc-----
Confidence 4789998 44322 1 23789999999999999999999 3499998 345678999999987653
Q ss_pred cccCCCcccCHHHHHhhh-cceeeeeccCccccCCccchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHH
Q 014987 77 YAGVACGYTTPLQGISRY-AKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQE 155 (415)
Q Consensus 77 ~~g~~~~~~t~~~~l~~~-~~~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~ 155 (415)
+.|.++..+.+ ++. +.+.+...+. +..... ....-++=+|+-..+. |.+.. ++ .+
T Consensus 412 ~~g~~~~~~~P----~~~G~~~~~~~~~~---------~~~~~~-~~~~~~~q~f~r~~~f-------~~~~~-~~--~~ 467 (535)
T 3sql_A 412 LRPNCPAIAIP----QRHGYAAEIVELKT---------LPRLQL-EAIPTLIQCFLRGNPF-------TEKLA-DP--ID 467 (535)
T ss_dssp CCTTCHHHHHH----HTTTEEEEEEETTT---------GGGBCC-CSSCEEEEEEECCCSS-------CSSCC-CC--HH
T ss_pred cCCCCCcccCH----HHcCceEEEEcCcc---------cccccc-CCCCeEEEEeecCCCC-------CCCcc-hH--HH
Confidence 33444444444 222 3343332221 000000 1112234445532221 22222 22 46
Q ss_pred HHHHHHhhCCCCEEEEEECCceeeccCcC-CCCCccEEEeccCCCh--hHHHHHHHHhhcC
Q 014987 156 LVSRVAKASRGPVVLVLMCGGPVDVSFAK-NDPRIGAILWVGYPGQ--AGGAAIADVLFGR 213 (415)
Q Consensus 156 li~~la~~~~~pvVvVl~~g~P~~l~~~~-~~~~v~Ail~a~~~g~--~~g~AladvL~G~ 213 (415)
.+++|.+. +.=.-+|+. |+||.+.|+. ..+ .|-++|.+|| +++.-+...|++.
T Consensus 468 ~~~~l~~~-~~~~~~~~y-g~py~~~~~~~~~~---~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 468 VLQKIAAQ-IPLQGVIFY-GSPYFLEALQTTLP---EIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp HHHHHHHH-SCEEEEEEE-ECCTTHHHHHHHCT---TSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred HHHHHHhc-CceeEEEEe-CChhHHHHHHHHhh---cCCcccCCccCHHHHHHHHHHHhcc
Confidence 78888653 333345666 9999999885 233 3446777777 4566667777774
No 8
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=97.38 E-value=0.00076 Score=56.45 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=41.8
Q ss_pred eEEEEEEEEeCCCCC-cceEEEEeeeCCCCCCCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMA-GTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~-G~evvQlY~~~~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
.++++|+|+|.|..+ +.--|.||+.. ++++-+-+.|+||++++|+|.+.+
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyvng---------~~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYING---------TLYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETT---------EEEEEEEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEECC---------EEEeeEEeccCCCCeEEEEEEEEc
Confidence 589999999999875 77888999853 455555668999999999999987
No 9
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.84 E-value=0.0044 Score=50.75 Aligned_cols=61 Identities=10% Similarity=0.193 Sum_probs=49.3
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEeeeCCCCCCCccceeccccee-eeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeE
Q 014987 315 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGE 392 (415)
Q Consensus 315 ~~~vsv~V~NtG~~-~G~evvQlY~~~~~~~~~p~~~L~gF~kv-~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~ 392 (415)
.++++++|+|.|.. ++.-.|-+|+.. .+++...+ .|++|++++|.|++.+ .. ++|.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w~~-~~------------~~G~ 77 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHWTL-DG------------TANS 77 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEEEC-CC------------SCSE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEEee-cC------------cCce
Confidence 68999999999985 577888899864 57777778 5999999999998876 20 3688
Q ss_pred EEEEE
Q 014987 393 HSLHI 397 (415)
Q Consensus 393 ~~~~v 397 (415)
|+|.+
T Consensus 78 ytl~a 82 (114)
T 2l0d_A 78 YTLTV 82 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88866
No 10
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=96.33 E-value=0.0025 Score=52.76 Aligned_cols=54 Identities=19% Similarity=0.287 Sum_probs=40.4
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEeeeCCCCCCCccceeccccee-eeCCCCEEEEEEEeC
Q 014987 315 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIH 372 (415)
Q Consensus 315 ~~~vsv~V~NtG~~-~G~evvQlY~~~~~~~~~p~~~L~gF~kv-~l~pGes~~V~~~~~ 372 (415)
.++++++|+|.|.. ++.--|.+|+..|.... .++|-..+ .|+||++.+++|++.
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg----~~vgt~tv~~LaaG~s~t~~v~~~ 72 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLGNPAQGG----VEIGRDTISRIPVGGTGLARVQWK 72 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSSCTTTCC----CCCBCCCCSCBCTTCEEECCEEEE
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeCCCccCC----eEEeeEEccccCCCCeEEEEEEEe
Confidence 69999999999986 56778999999875433 23344445 599999999555444
No 11
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=94.13 E-value=0.32 Score=39.86 Aligned_cols=68 Identities=9% Similarity=0.063 Sum_probs=46.7
Q ss_pred eEEEEEEEEeCCCCCc------ceEEEEeeeCCCCC-------CCccceecccceeeeCCCCEEEEEEEeCCCCCeeEEe
Q 014987 315 SLGLHVDIKNTGDMAG------THTLLVFAKPPAGN-------WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVD 381 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G------~evvQlY~~~~~~~-------~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~ls~~d 381 (415)
.+.+.++|+|.|+.+- .--..+.+.+..+. ++-- .-.++...|+|||+.+.+++++.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~F--tQa~~~~tl~pGE~~~f~~~w~~-------- 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMF--TQAFQNLTLESGETYDFSDVWKE-------- 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCC--CCCCEEEEECTTCEEEEEEEESS--------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchh--hhhhceEEECCCCEEEEEEEeCC--------
Confidence 6899999999998441 11223445554332 2222 23777889999999999999983
Q ss_pred CCCCEEecCeEEEEEE
Q 014987 382 KFGIRRIPMGEHSLHI 397 (415)
Q Consensus 382 ~~~~~~~~~G~~~~~v 397 (415)
.++||.|++.+
T Consensus 89 -----~~~pG~Ytl~a 99 (120)
T 3isy_A 89 -----VPEPGTYEVKV 99 (120)
T ss_dssp -----CCCSEEEEEEE
T ss_pred -----CCCCccEEEEE
Confidence 24799999954
No 12
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=92.21 E-value=0.25 Score=38.76 Aligned_cols=51 Identities=20% Similarity=0.114 Sum_probs=30.4
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCC---C--CCccce-------ecccceeeeCCCCEEEEEEE
Q 014987 316 LGLHVDIKNTGDMAGTHTLLVFAKPPAG---N--WSPNKQ-------LIGFKKVHVTAGALQSVRLD 370 (415)
Q Consensus 316 ~~vsv~V~NtG~~~G~evvQlY~~~~~~---~--~~p~~~-------L~gF~kv~l~pGes~~V~~~ 370 (415)
-+++++|+|||+|+ ||+=-+...- . ...... .-.=+-|..+||++++|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 37889999999998 6762111110 0 111111 12224567899999999884
No 13
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=89.98 E-value=0.79 Score=44.52 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=18.7
Q ss_pred eeeCCCCEEEEEEEeCCCCCee
Q 014987 357 VHVTAGALQSVRLDIHVCKHLS 378 (415)
Q Consensus 357 v~l~pGes~~V~~~~~~~~~ls 378 (415)
+.|+||||.+++|.|....+|+
T Consensus 95 ~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp EEECTTCEEEEEEECTTTBTCC
T ss_pred EEeCCCCeEEEEEehhhccccC
Confidence 4689999999999998756776
No 14
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=89.97 E-value=0.55 Score=38.31 Aligned_cols=49 Identities=20% Similarity=0.220 Sum_probs=30.4
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCC--CCCc-----cceeccc-------ceeeeCCCCEEEEEEE
Q 014987 316 LGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSP-----NKQLIGF-------KKVHVTAGALQSVRLD 370 (415)
Q Consensus 316 ~~vsv~V~NtG~~~G~evvQlY~~~~~~--~~~p-----~~~L~gF-------~kv~l~pGes~~V~~~ 370 (415)
-+++++|+|||+|+ ||+ ...+- ...| ...=.|+ +-|..+||++++|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQV--GSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQV--GSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEE--ETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEE--ccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 47899999999998 565 22221 0111 1111222 4567899999999885
No 15
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=89.97 E-value=0.55 Score=38.31 Aligned_cols=49 Identities=20% Similarity=0.220 Sum_probs=30.4
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCC--CCCc-----cceeccc-------ceeeeCCCCEEEEEEE
Q 014987 316 LGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSP-----NKQLIGF-------KKVHVTAGALQSVRLD 370 (415)
Q Consensus 316 ~~vsv~V~NtG~~~G~evvQlY~~~~~~--~~~p-----~~~L~gF-------~kv~l~pGes~~V~~~ 370 (415)
-+++++|+|||+|+ ||+ ...+- ...| ...=.|+ +-|..+||++++|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQV--GSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQV--GSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEE--ETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEE--ccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 47899999999998 565 22221 0111 1111222 4567899999999885
No 16
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.75 E-value=1.7 Score=34.39 Aligned_cols=61 Identities=10% Similarity=0.105 Sum_probs=37.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeC-CCCCCCccceecccceeeeCCCCEEEEEEEeCCCCCeeEEeC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKP-PAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDK 382 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~-~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~ls~~d~ 382 (415)
..+.+++++|+|+.+. +.+. +........--....+-.|+||++.+|+++..+ +....++.
T Consensus 27 ~~~~~~~l~N~g~~p~------~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~~ 88 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDA------LFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFEE 88 (112)
T ss_dssp CEEEEEEEEECCSSCE------EEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEEE
T ss_pred EEEEEEEEEECCcceE------EEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEEE
Confidence 4678999999999863 3322 111000000111344567999999999999998 66665543
No 17
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=88.92 E-value=0.58 Score=38.62 Aligned_cols=68 Identities=19% Similarity=0.362 Sum_probs=40.8
Q ss_pred EEEEEEEeCCCCC----cceEEEEeeeCCCC------------CCCc--cceecccceeeeCCCCEEEEEEEeCCCCCee
Q 014987 317 GLHVDIKNTGDMA----GTHTLLVFAKPPAG------------NWSP--NKQLIGFKKVHVTAGALQSVRLDIHVCKHLS 378 (415)
Q Consensus 317 ~vsv~V~NtG~~~----G~evvQlY~~~~~~------------~~~p--~~~L~gF~kv~l~pGes~~V~~~~~~~~~ls 378 (415)
+|+++++|+|.++ |-+.|-.=-..... .--| ..+....+++ |.|||+.+|+|+.+. |+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~-l~pGes~~vtf~~~~---l~ 103 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKL-IGSGEKDSVTFDVSK---LK 103 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCC-BCTTCEEEEEEEGGG---C-
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccce-eCCCcEEEEEEeCcC---cC
Confidence 6889999999998 88887762111110 0011 1122333333 899999999999873 11
Q ss_pred EEeCCCCEEecCeEEEEEEe
Q 014987 379 VVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 379 ~~d~~~~~~~~~G~~~~~vg 398 (415)
++|+|.+++.
T Consensus 104 ----------~~G~y~f~C~ 113 (125)
T 3fsa_A 104 ----------EGEQYMFFCA 113 (125)
T ss_dssp ------------CCEEEECS
T ss_pred ----------CCccEEEEcC
Confidence 4677777654
No 18
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=87.81 E-value=0.94 Score=37.47 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=13.5
Q ss_pred eeCCCCEEEEEEEeC
Q 014987 358 HVTAGALQSVRLDIH 372 (415)
Q Consensus 358 ~l~pGes~~V~~~~~ 372 (415)
.|.|||+.+|+|+.+
T Consensus 85 ~l~pGes~~vtf~~~ 99 (128)
T 2iaa_C 85 VIGGGETDSVTFDVS 99 (128)
T ss_dssp CBCTTCEEEEEEESS
T ss_pred eeCCCCEEEEEEecc
Confidence 479999999999986
No 19
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=87.38 E-value=1.5 Score=45.48 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=61.1
Q ss_pred cccccCcCCCCCCeeecccccCCCccccccccccccccccccccceeccccCCCCceeEEEEEEEEeCCC--CCcceEEE
Q 014987 258 VVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGD--MAGTHTLL 335 (415)
Q Consensus 258 ~lypFG~GLSYt~F~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~V~NtG~--~~G~evvQ 335 (415)
.+|..|.|+.|..|..+.+.-.. ...+ .+ ...+. .+. +.+++++|+|.+. ++|.+++
T Consensus 337 ~~ye~~~~i~~~~~~~~~l~~~~-~~~~-----------~~---~~~~~----~g~-~~~~~~~vtn~~~~~~~~~~~~- 395 (601)
T 1w8o_A 337 LLYEPGTGIRYANFNLAWLGGIC-APFT-----------IP---DVALE----PGQ-QVTVPVAVTNQSGIAVPKPSLQ- 395 (601)
T ss_dssp EEECCSSEEEEEEECHHHHTBCS-CCEE-----------CC---CEEEC----TTC-EEEEEEEEECCSSSCBSSCEEE-
T ss_pred EEEecCCcceEEEecHHHhcccc-CCCc-----------Cc---cceec----CCc-eeEEEEEEECCCceeccCceEE-
Confidence 45666677888888777665321 0000 00 01111 112 6899999999976 7887777
Q ss_pred EeeeCCCCCCCccceecccceeeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 336 VFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 336 lY~~~~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
||+..... ..+ .-..++||++.++.|+|.. .+- +.+|.|.+-+.
T Consensus 396 ~~~~~~~~-------~~~-~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~ 439 (601)
T 1w8o_A 396 LDASPDWQ-------VQG-SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGAT 439 (601)
T ss_dssp EECCTTSE-------EEE-EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEE
T ss_pred EecCCCcE-------Eec-cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEE
Confidence 88744332 111 2256899999999887776 431 34677776555
No 20
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=87.00 E-value=1.2 Score=42.91 Aligned_cols=54 Identities=15% Similarity=0.300 Sum_probs=35.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEE---------eeeCCCC--C-CCccceecccceee------eCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPAG--N-WSPNKQLIGFKKVH------VTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQl---------Y~~~~~~--~-~~p~~~L~gF~kv~------l~pGes~~V~~~~~~ 373 (415)
+++++++|||.|+- .|+| |+.+... . ..| .+|.+.+... ++|||++++++++..
T Consensus 265 ~l~~~~~VtN~g~~----pvrlgeF~tA~vrFln~~~~~~~~~~P-~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 265 AMRMKLTITNHGNS----PIRLGEFYTASVRFLDSDVYKDTTGYP-EDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEECSSS----CEEEEEEECSSCEEECTTTCCCCSCCC-GGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEcCCCC----ceEeeeEEeccEEEeCCcccccCCCCh-HHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 69999999999964 4555 3332211 1 234 3566544433 899999999998764
No 21
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=85.94 E-value=1.5 Score=36.34 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=13.5
Q ss_pred eeCCCCEEEEEEEeC
Q 014987 358 HVTAGALQSVRLDIH 372 (415)
Q Consensus 358 ~l~pGes~~V~~~~~ 372 (415)
.|.|||+.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 22
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=84.52 E-value=1.7 Score=35.90 Aligned_cols=15 Identities=33% Similarity=0.508 Sum_probs=13.6
Q ss_pred eeCCCCEEEEEEEeC
Q 014987 358 HVTAGALQSVRLDIH 372 (415)
Q Consensus 358 ~l~pGes~~V~~~~~ 372 (415)
.|.|||+.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVS 100 (128)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred eeCCCCEEEEEEecc
Confidence 389999999999986
No 23
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=84.23 E-value=1.8 Score=35.73 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=13.6
Q ss_pred eeCCCCEEEEEEEeC
Q 014987 358 HVTAGALQSVRLDIH 372 (415)
Q Consensus 358 ~l~pGes~~V~~~~~ 372 (415)
.|.|||+.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 2ccw_A 86 VIGGGESDSVTFDVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999987
No 24
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=80.26 E-value=2.2 Score=38.21 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=29.7
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCC--CCCc-----cceecc-------cceeeeCCCCEEEEEEE
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSP-----NKQLIG-------FKKVHVTAGALQSVRLD 370 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~--~~~p-----~~~L~g-------F~kv~l~pGes~~V~~~ 370 (415)
+++++|+|||+|+ ||+ ...+- ...| ...=.| =+-|..+||++++|++.
T Consensus 126 ~~~l~V~NtGDRP----IQV--GSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 187 (225)
T 3qga_A 126 ITELKVTNKGPKS----LHV--GSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLI 187 (225)
T ss_dssp CEEEEEEECSSSC----EEE--ETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred eEEEEEEECCCCc----eee--ccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEE
Confidence 6889999999998 565 22221 0111 111112 23467899999999884
No 25
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=78.84 E-value=2.1 Score=38.68 Aligned_cols=49 Identities=22% Similarity=0.231 Sum_probs=30.4
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCC--C-----CCccceeccc-------ceeeeCCCCEEEEEEEe
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAG--N-----WSPNKQLIGF-------KKVHVTAGALQSVRLDI 371 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~--~-----~~p~~~L~gF-------~kv~l~pGes~~V~~~~ 371 (415)
+++++|+|||+|+ ||+ ...+- . ......=.|| +-|..+||++++|++.-
T Consensus 126 ~~~l~V~NtGDRP----IQV--GSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQI--GSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEE--ETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEe--ccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5889999999998 565 32221 0 1111111222 45678999999999853
No 26
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=74.68 E-value=5.1 Score=33.42 Aligned_cols=55 Identities=13% Similarity=0.072 Sum_probs=32.2
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceecc-cceeeeCCCCEEEEEEEeCC
Q 014987 316 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIG-FKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 316 ~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~g-F~kv~l~pGes~~V~~~~~~ 373 (415)
.+-+++|+|+|..+..--.+ ..+.........|.= =.+-.|+|||+.+|++++..
T Consensus 45 ~~~~l~I~Ntg~vpa~F~f~---~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 45 QKEKFQISNNGQVPCHFSFI---PKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp EEEEEEEEECSSSCEEEEEE---CCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeEEEEEcCCccceEEEEe---cCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 57899999999987532222 111111000001111 12347999999999999986
No 27
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=74.21 E-value=4.2 Score=37.07 Aligned_cols=43 Identities=14% Similarity=0.176 Sum_probs=30.4
Q ss_pred EEeCCCCCcceEEEEeeeCCCCC--CCc--------cceecccceeeeCCCCEEE
Q 014987 322 IKNTGDMAGTHTLLVFAKPPAGN--WSP--------NKQLIGFKKVHVTAGALQS 366 (415)
Q Consensus 322 V~NtG~~~G~evvQlY~~~~~~~--~~p--------~~~L~gF~kv~l~pGes~~ 366 (415)
|-|.|. |.=+|+||...+.+. ..| .+.+..++++.|.||||-|
T Consensus 131 iinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT 183 (246)
T 3kmh_A 131 IINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC 183 (246)
T ss_dssp EEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE
T ss_pred EEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe
Confidence 456553 577788888876642 122 4578889999999999844
No 28
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.73 E-value=6 Score=31.86 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=37.6
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceecccceeeeCCCCEEEEEEEeCCCCCeeEEeC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDK 382 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~ls~~d~ 382 (415)
+-+.++.|+|+|+.+++--.+. ..|.. ..|. +-.|+|||+.+++++..+ .....|+.
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~--~~~F~-i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~ 98 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKT--CRPFS-IEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSG 98 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEEC--CTTEE-EESS-------EEEECTTCEEEEEEEECC-SSSBCCCC
T ss_pred eEEEEEEEEECCCCCEEEEEec--CCCeE-EECC-------cCEECCCCEEEEEEEEEc-CCCccEEE
Confidence 4578999999999876533221 11110 2332 256899999999999998 65555443
No 29
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=72.27 E-value=2.9 Score=36.19 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=13.4
Q ss_pred eeCCCCEEEEEEEeC
Q 014987 358 HVTAGALQSVRLDIH 372 (415)
Q Consensus 358 ~l~pGes~~V~~~~~ 372 (415)
.|.|||+.+|+|+.+
T Consensus 125 ~l~pGet~svtf~~~ 139 (167)
T 3ay2_A 125 LIGGGEESSLTLDPA 139 (167)
T ss_dssp CBCTTCEEEEEECGG
T ss_pred eeCCCCEEEEEEecC
Confidence 479999999999876
No 30
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=71.64 E-value=6 Score=38.63 Aligned_cols=53 Identities=19% Similarity=0.299 Sum_probs=33.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEE---------eeeCCCCC---CCcc-----ceecccceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPAGN---WSPN-----KQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQl---------Y~~~~~~~---~~p~-----~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
+++++++|||+|+-+ ||| ++...... ..|. +-|. =.. -++|||+++++++++.
T Consensus 299 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 299 ELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeeh
Confidence 699999999999644 554 22211111 2232 1134 334 6999999999999875
No 31
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=65.93 E-value=20 Score=32.85 Aligned_cols=57 Identities=9% Similarity=0.005 Sum_probs=36.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
.+.+.+.|-|..+..-+--|+|........ ..+... --+++.|.||++++|.|.|.+
T Consensus 97 ~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~--~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 97 QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQR--YRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCC--EEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCc--eEEEEEECCCCeEEEEEEEEe
Confidence 589999999998766554555554332221 111111 123467999999999999987
No 32
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=64.93 E-value=16 Score=35.44 Aligned_cols=58 Identities=12% Similarity=0.039 Sum_probs=34.6
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceeccc-ceeeeCCCCEEEEEEEeCCCCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKH 376 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF-~kv~l~pGes~~V~~~~~~~~~ 376 (415)
..+-+++|+|||..+..--. ...+.....+...|.=. .+-.|.|||+..|++++.. ++
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f---~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v-~~ 105 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSF---IPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV-SK 105 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEE---ECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB-CT
T ss_pred eEEEEEEEEecCCceEEEEE---EeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE-CH
Confidence 46788999999988742211 11122222111122211 2347999999999999987 44
No 33
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=64.43 E-value=7.3 Score=42.79 Aligned_cols=58 Identities=17% Similarity=0.316 Sum_probs=37.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeC--CCCC---CCccceecc--cceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKP--PAGN---WSPNKQLIG--FKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~--~~~~---~~p~~~L~g--F~kv~l~pGes~~V~~~~~~ 373 (415)
+++++++|+|.|+.+.....++-+.. +... ..|. .|.- -+.+.|+|||+++++++++.
T Consensus 500 ~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 500 KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 57899999999986644444433322 2221 2343 3432 24578999999999999986
No 34
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=63.10 E-value=9.9 Score=41.27 Aligned_cols=49 Identities=18% Similarity=0.223 Sum_probs=30.6
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCC--CCccc---eeccc---------ceeeeCCCCEEEEEEE
Q 014987 316 LGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNK---QLIGF---------KKVHVTAGALQSVRLD 370 (415)
Q Consensus 316 ~~vsv~V~NtG~~~G~evvQlY~~~~~~~--~~p~~---~L~gF---------~kv~l~pGes~~V~~~ 370 (415)
-.++++|+|+|+|+ +|+ ...+.- ..|.- +.++| +-|..+||++++|++.
T Consensus 151 ~~~~~~v~~~~~r~----~~v--~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 151 KAVILKVTSKGDRP----IQV--GSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp EEEEEEEEECCSSC----EEE--ETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEeCCCCc----eEe--ccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 47899999999998 565 322221 11210 11111 3467899999999984
No 35
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=61.58 E-value=11 Score=30.34 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=23.3
Q ss_pred eCCCCEEEEEEEeCCCCCeeEEeCC---------------CCE--Eec-CeEEEEEEeCC
Q 014987 359 VTAGALQSVRLDIHVCKHLSVVDKF---------------GIR--RIP-MGEHSLHIGDL 400 (415)
Q Consensus 359 l~pGes~~V~~~~~~~~~ls~~d~~---------------~~~--~~~-~G~~~~~vg~~ 400 (415)
+.+||+.+|+++-...-.|++++.. +.| .|+ .|.|+|.|...
T Consensus 36 a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 36 AXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp C-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred ecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 4577777777743331124444332 268 677 79999999853
No 36
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=61.49 E-value=29 Score=30.87 Aligned_cols=51 Identities=10% Similarity=0.109 Sum_probs=33.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
..+.+++++|+|+.+- +++--...+.- ....+.|-.++|||+.+++++.+.
T Consensus 135 ~~~~~f~i~N~G~~pL----~I~~v~~scgc----t~~~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGPL----RLHSVTTRNPA----LTAVPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp CEEEEEEEEECSSSCE----EEEEEEECSTT----EEEEESCSEECTTCEEEEEEEECH
T ss_pred eEEEEEEEEECCCCCE----EEEEEEeCCCC----EeeecCCccCCCCCEEEEEEEEec
Confidence 4788999999998652 22111111110 122355677999999999999987
No 37
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=59.35 E-value=32 Score=27.10 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=10.2
Q ss_pred Eec-CeEEEEEEe
Q 014987 387 RIP-MGEHSLHIG 398 (415)
Q Consensus 387 ~~~-~G~~~~~vg 398 (415)
.|+ .|+|+|.|.
T Consensus 78 ~LP~sG~Y~I~V~ 90 (111)
T 4g9s_B 78 SLPASGKYELRVL 90 (111)
T ss_dssp ECSSSEEEEEEEE
T ss_pred EecCCccEEEEEE
Confidence 676 799999995
No 38
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=59.16 E-value=23 Score=33.37 Aligned_cols=138 Identities=8% Similarity=0.083 Sum_probs=69.2
Q ss_pred hCeEEEecCCCCCCCcCCCCCeEEEEccCCCcccccccccccCCCcccCHHHHHhhhcce--eeeeccCccccCCccchH
Q 014987 38 QGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKT--IHQAGCFGVACNGNQLIG 115 (415)
Q Consensus 38 esivLLKN~~~~LPL~~~~~~~V~viG~~a~~~~~~~G~~~g~~~~~~t~~~~l~~~~~~--~~~~g~~~~~~~~~~~~~ 115 (415)
..+.|++|...+--|... ++++++.-..-+. ..+..+.+.|++.++. .+..-|. .+....+
T Consensus 139 ~~~~vV~~~ed~~~l~~~--~kv~~vsQTT~s~-----------~~~~~iv~~L~~r~p~~~~~~tIC~----AT~~RQ~ 201 (297)
T 3dnf_A 139 GKGIVVETLEDIGEALKH--ERVGIVAQTTQNE-----------EFFKEVVGEIALWVKEVKVINTICN----ATSLRQE 201 (297)
T ss_dssp CCEEEESSGGGGGGGGGC--SEEEEEECTTCCH-----------HHHHHHHHHHHHHSSEEEEECCCCS----HHHHHHH
T ss_pred CcEEEEcCHHHHHhcCCC--CcEEEEEecCCcH-----------HHHHHHHHHHHHhCCCCCCCCCccH----HHHHHHH
Confidence 356777775543223221 4677764322111 0123456677776542 2333331 1223345
Q ss_pred HHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHhhCCCCEEEEEECCceeeccCcCCCCCccEE-Ee
Q 014987 116 AAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAI-LW 194 (415)
Q Consensus 116 ~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ai-l~ 194 (415)
++.+.++++|++||+-|.. +.+-.+|. ++++..+.|+..| -+..=++..|+ +.+..| |.
T Consensus 202 av~~la~~~D~miVVGg~n---------------SSNT~rL~-eia~~~~~~ty~I-e~~~el~~~wl---~~~~~VGIT 261 (297)
T 3dnf_A 202 SVKKLAPEVDVMIIIGGKN---------------SGNTRRLY-YISKELNPNTYHI-ETAEELQPEWF---RGVKRVGIS 261 (297)
T ss_dssp HHHHHGGGSSEEEEESCTT---------------CHHHHHHH-HHHHHHCSSEEEE-SSGGGCCGGGG---TTCSEEEEE
T ss_pred HHHHHHhhCCEEEEECCCC---------------CchhHHHH-HHHHhcCCCEEEe-CChHHCCHHHh---CCCCEEEEe
Confidence 6677889999999876533 23445666 4554456776554 22333444566 355555 34
Q ss_pred ccCCChhH-HHHHHHHhhc
Q 014987 195 VGYPGQAG-GAAIADVLFG 212 (415)
Q Consensus 195 a~~~g~~~-g~AladvL~G 212 (415)
|.-+.++. -+.+.+.|..
T Consensus 262 AGASTP~~li~eVi~~l~~ 280 (297)
T 3dnf_A 262 AGASTPDWIIEQVKSRIQE 280 (297)
T ss_dssp ECTTCCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHH
Confidence 44333322 2445555544
No 39
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=57.58 E-value=34 Score=30.61 Aligned_cols=53 Identities=19% Similarity=0.117 Sum_probs=35.1
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC---CCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~---~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
.+++.|+|+|+. .-.||..+.+.... ..|..-.=-. ..|+||+.++|+|....
T Consensus 29 ~~sl~l~N~~~~--p~LvQswv~~~~~~~~~~~pFivtPPl--~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDY--PVLIQSRIYDENKEKESEDPFVVTPPL--FRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSS--CEEEEEEEECTTSCCCSSCSEEEESSE--EEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCC--CEEEEEEEecCCCCccccCCEEECCCe--EEeCCCCceEEEEEecC
Confidence 588999999976 48999999764332 1221111111 24899999999997554
No 40
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=57.53 E-value=38 Score=27.59 Aligned_cols=66 Identities=12% Similarity=0.119 Sum_probs=44.5
Q ss_pred CccceecccceeeeCCCCEEEEEEEeCCCCC------------e------eEEeCCC-CEEecCeEEEE---EEeCCCce
Q 014987 346 SPNKQLIGFKKVHVTAGALQSVRLDIHVCKH------------L------SVVDKFG-IRRIPMGEHSL---HIGDLKHS 403 (415)
Q Consensus 346 ~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~------------l------s~~d~~~-~~~~~~G~~~~---~vg~~~~~ 403 (415)
.|...+..-.|..|.||||++|++-+.- -| . ..||.-. +.-..||+|.= +-|.++..
T Consensus 47 SpDLtvisiDk~vL~PGESA~it~IvKD-id~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~ 125 (146)
T 2lv4_A 47 SPDLTVMSIDKSVLSPGESATITTIVKD-IDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNER 125 (146)
T ss_dssp CGGGCEEECCCCCBCTTCEEEEEEECBB-TTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCE
T ss_pred CCCcEEEecCccccCCCcceEEEEEEEe-CCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCce
Confidence 4666788889999999999999997543 21 1 2344321 12345899876 45788888
Q ss_pred EEEEEEecc
Q 014987 404 ISLQANLEG 412 (415)
Q Consensus 404 ~~~~~~~~~ 412 (415)
+.++-+--|
T Consensus 126 i~l~yky~g 134 (146)
T 2lv4_A 126 IDISFKYAM 134 (146)
T ss_dssp EEEEEECST
T ss_pred EEEEeeeee
Confidence 888776544
No 41
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=52.79 E-value=44 Score=27.09 Aligned_cols=26 Identities=19% Similarity=0.103 Sum_probs=21.1
Q ss_pred eeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 357 VHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 357 v~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
..|.||++.+++|+++. +|.|.++++
T Consensus 98 ~~l~pG~~~~~~~~~~~----------------~G~y~f~C~ 123 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA----------------PGTYLYICT 123 (140)
T ss_dssp CCBCTTEEEEEEEECCS----------------SEEEEEECC
T ss_pred eeeCCCceeEEEEEeCC----------------CeeEEEEeC
Confidence 45899999999988753 588888876
No 42
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=50.45 E-value=56 Score=29.97 Aligned_cols=54 Identities=11% Similarity=0.111 Sum_probs=35.2
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCccc---eeccccee-eeCCCCEEEEEEEeC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK---QLIGFKKV-HVTAGALQSVRLDIH 372 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~---~L~gF~kv-~l~pGes~~V~~~~~ 372 (415)
.+++.|+|+|+. .-.||.++.+......|.. -+.--=-+ .|+||+.++|+|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 589999999986 6899999986432111211 11111122 489999999999644
No 43
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=48.65 E-value=1.1e+02 Score=26.91 Aligned_cols=51 Identities=14% Similarity=0.064 Sum_probs=31.4
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceeccc-ceeeeCCCCEEEEEEEeCCCCCe
Q 014987 316 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKHL 377 (415)
Q Consensus 316 ~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF-~kv~l~pGes~~V~~~~~~~~~l 377 (415)
.+..+.++|+|+.+=.= .++ +.|.. +..- .-..|+|||+..++++.+. ..+
T Consensus 21 ~~~~~~i~N~g~~pl~i-~~~--~~p~~-------~~~~~~~~~I~PG~~g~I~vt~~~-~~~ 72 (220)
T 2qsv_A 21 GVVRLVVNNTDESDLQV-AVV--SLPSF-------VSLDDRAFRLQAREPRELNLSLAV-PRN 72 (220)
T ss_dssp CEEEEEEEECSSSCEEE-EEE--ECCTT-------EECSCCEEEECSSSCEEEEEEECC-CTT
T ss_pred ceEEEEEEeCCCCceEE-Eec--cCCCc-------eEeeeCcceeCCCCceEEEEEEcc-hhc
Confidence 46799999999866221 111 11111 1111 1246899999999999987 544
No 44
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=46.08 E-value=11 Score=31.92 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=29.6
Q ss_pred cccceeeeCCCCEEEEEEEeCCCCCeeEEeCCCCEE
Q 014987 352 IGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 387 (415)
Q Consensus 352 ~gF~kv~l~pGes~~V~~~~~~~~~ls~~d~~~~~~ 387 (415)
++|.--.|.||++.+|.|.|.. .+.+.||...+|-
T Consensus 94 I~Ft~g~l~pg~~~eiQ~ri~~-~~~s~~d~snDyS 128 (152)
T 4b9f_A 94 ISFTGGTLEPGAHVQIQGRFAK-NDWSNYTQSNDYS 128 (152)
T ss_dssp EEESSCEECTTCEEEEEEEEEE-TTCCCEESTTCTT
T ss_pred EEccCceEcCCCcEEEEEEEEC-CCCcceeEcCCcC
Confidence 4676667999999999999998 8999999876653
No 45
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=45.81 E-value=7.9 Score=33.13 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=28.4
Q ss_pred cccce--eeeCCCCEEEEEEEeCCCCCeeEEeCCCCE
Q 014987 352 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIR 386 (415)
Q Consensus 352 ~gF~k--v~l~pGes~~V~~~~~~~~~ls~~d~~~~~ 386 (415)
++|.. ..|.||++..|.|.|.. .+++.||...+|
T Consensus 97 I~F~~~ag~l~pg~s~eiq~ri~~-~dws~~dqsNDy 132 (160)
T 1g43_A 97 VALNSDAGSLPAGGSIEIQTRFAR-NDWSNFDQSNDW 132 (160)
T ss_dssp EEECTTSCEECTTCEEEEEEEEEE-TTCCCEEGGGCT
T ss_pred EEecCCcceECCCCcEEEEEEEec-CCCCcccccCCc
Confidence 56755 67999999999999998 899999986654
No 46
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=45.48 E-value=66 Score=29.14 Aligned_cols=52 Identities=10% Similarity=0.010 Sum_probs=33.8
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEeC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH 372 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~~ 372 (415)
.+++.|+|+|+. .-.||..+.+.... ..|..-.=-. ..|+||+.++|+|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPL--FRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSE--EEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 478899999975 48999999863322 1121000000 2589999999999654
No 47
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=44.46 E-value=63 Score=26.96 Aligned_cols=24 Identities=8% Similarity=-0.035 Sum_probs=18.0
Q ss_pred eeCCCC--EEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 358 HVTAGA--LQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 358 ~l~pGe--s~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
.+.||| +.+++|++ . +|.|.+++.
T Consensus 113 ~i~PG~sgt~t~tft~-~----------------pGtY~y~C~ 138 (154)
T 2cal_A 113 VPKDGKFGYTDFTWHP-T----------------AGTYYYVCQ 138 (154)
T ss_dssp CCBTTBEEEEEEEECC-C----------------SEEEEEECC
T ss_pred ccCCCCceEEEEEEEE-C----------------CceEEEECC
Confidence 579999 77777776 4 488888775
No 48
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=43.89 E-value=16 Score=34.88 Aligned_cols=79 Identities=13% Similarity=0.124 Sum_probs=42.8
Q ss_pred hHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHhhCCCCEEEEEECCceeeccCcCCCCCccEE-
Q 014987 114 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAI- 192 (415)
Q Consensus 114 ~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ai- 192 (415)
.+++.+.++++|++||+-|.. +.+-.+|. ++++..+.|+..| -+..=++..|+ ..+..|
T Consensus 216 Q~av~~lA~~vD~miVVGg~n---------------SSNT~rL~-eia~~~g~~ty~I-e~~~el~~~wl---~g~~~VG 275 (328)
T 3szu_A 216 QEAVRALAEQAEVVLVVGSKN---------------SSNSNRLA-ELAQRMGKRAFLI-DDAKDIQEEWV---KEVKCVG 275 (328)
T ss_dssp HHHHHHHHHHCSEEEEECCTT---------------CHHHHHHH-HHHHHTTCEEEEE-SSGGGCCHHHH---TTCSEEE
T ss_pred HHHHHHHHHhCCEEEEeCCCC---------------CchHHHHH-HHHHHhCCCEEEe-CChHHCCHHHh---CCCCEEE
Confidence 355677888999999876533 23445565 4555566675543 22333444566 345554
Q ss_pred EeccCCChhH-HHHHHHHhhc
Q 014987 193 LWVGYPGQAG-GAAIADVLFG 212 (415)
Q Consensus 193 l~a~~~g~~~-g~AladvL~G 212 (415)
|.|.-+.++. -+.+.+.|..
T Consensus 276 ITAGASTP~~lieeVi~~l~~ 296 (328)
T 3szu_A 276 VTAGASAPDILVQNVVARLQQ 296 (328)
T ss_dssp EEECTTCCHHHHHHHHHHHHH
T ss_pred EeecCCCCHHHHHHHHHHHHH
Confidence 3444333322 3445555554
No 49
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=42.25 E-value=41 Score=29.36 Aligned_cols=55 Identities=22% Similarity=0.272 Sum_probs=36.5
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh-----hCCCCEEEEEECCce
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGGP 177 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~-----~~~~pvVvVl~~g~P 177 (415)
....+..+.+++||.+|++.= --+..+|+.-+.+++.+.. -.+||+.++..+|++
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP-----------~Y~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~ 121 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTP-----------EYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGM 121 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEEC-----------CBTTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSS
T ss_pred HHHHHHHHHHHhCCEEEEEcC-----------ccCCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCC
Confidence 345667888999999999851 1245678877888887753 235666655554443
No 50
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=40.91 E-value=45 Score=28.82 Aligned_cols=55 Identities=11% Similarity=0.056 Sum_probs=38.8
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh---------------hCCCCEEEEEECCc
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 176 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~---------------~~~~pvVvVl~~g~ 176 (415)
.++.+..+.+++||.+|++. + --+..+|..=+.+|+.+.. ..+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~--P---------~y~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIF--P---------IWWSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEE--E---------CBTTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEEC--c---------hhhccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 45567788899999999875 1 1245677777778887731 23677877777787
Q ss_pred e
Q 014987 177 P 177 (415)
Q Consensus 177 P 177 (415)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
No 51
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=40.87 E-value=41 Score=35.46 Aligned_cols=57 Identities=11% Similarity=-0.070 Sum_probs=42.1
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC--CCccceecccc--eeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFK--KVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~--~~p~~~L~gF~--kv~l~pGes~~V~~~~~~ 373 (415)
.+.+++.++|.++.. ..|+++++...-. +.+..++...+ .+.|+|++++++.++|..
T Consensus 488 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 488 DFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 599999999988765 6788887753332 55655652223 356999999999999886
No 52
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=40.62 E-value=23 Score=27.16 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=21.8
Q ss_pred cceeeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 354 FKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 354 F~kv~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
|..+.|.||++.+++|+.+. .+|.|.+++.
T Consensus 62 ~~~~~~~pG~~~~~~f~~~~---------------~~G~y~y~C~ 91 (106)
T 2gim_A 62 HKQLLMSPGQSTSTTFPADA---------------PAGEYTFYCE 91 (106)
T ss_dssp BCSCCCSTTCEEEEECCTTC---------------CSEEEEEECT
T ss_pred ccceeeCCCCEEEEEEecCC---------------CCceEEEEeC
Confidence 45567899999888776433 5688888765
No 53
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=38.18 E-value=47 Score=25.70 Aligned_cols=27 Identities=11% Similarity=0.281 Sum_probs=20.9
Q ss_pred eeeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 356 KVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 356 kv~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
+..+.||++.+++|+.+ .+|.|.+++.
T Consensus 70 ~~~i~pG~~~~~~f~~~----------------~~G~y~~~C~ 96 (112)
T 1iby_A 70 QEVIKAGETKTISFTAD----------------KAGAFTIWCQ 96 (112)
T ss_dssp EEEECTTCEEEEEEECC----------------SCEEEEEBCS
T ss_pred eeEeCCCCEEEEEEECC----------------CCEEEEEECC
Confidence 56789999999999754 4588877664
No 54
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=37.88 E-value=7.5 Score=32.77 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=28.6
Q ss_pred cccceeeeCCCC-EEEEEEEeCCCCCeeEEeCCCCEE
Q 014987 352 IGFKKVHVTAGA-LQSVRLDIHVCKHLSVVDKFGIRR 387 (415)
Q Consensus 352 ~gF~kv~l~pGe-s~~V~~~~~~~~~ls~~d~~~~~~ 387 (415)
++|....|.||+ +..|.|.|.. .+++-||...+|-
T Consensus 81 I~f~~g~l~pg~~s~eiQ~Ri~~-~dws~~dqsnDyS 116 (146)
T 3zqx_A 81 LEFKDVKLPAGGQTGEIQFVIRY-ADWSFHDQSNDYS 116 (146)
T ss_dssp EEECSCEECTTCBCCCEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEeCCcEEcCCCceEEEEEEEEc-CCCccccccCCcc
Confidence 567777899985 7799999998 8999999876653
No 55
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum}
Probab=37.06 E-value=1e+02 Score=27.06 Aligned_cols=39 Identities=13% Similarity=0.289 Sum_probs=29.3
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
.+.++|+|.|... --+|||-.. +.|++|++=+|+|.+..
T Consensus 76 ~l~v~I~~~G~~~--W~vQl~q~g----------------i~L~~G~tY~lSFdAkA 114 (205)
T 3p6b_A 76 AFRLTVIDKGQNK--WSVQMRHRG----------------ITLEQGHTYTVRFTIWS 114 (205)
T ss_dssp EEEEEEEEECSSG--GGEEEEEEE----------------EEECTTCEEEEEEEEEE
T ss_pred EEEEEECCCCCCc--eeEEEEECC----------------EEecCCCEEEEEEEEEe
Confidence 5778899988653 348887652 67889998888888764
No 56
>3zuc_A Cellulosomal scaffoldin; crystalline cellulose-binding protein, sugar binding protein cellulosome; HET: EDO 1PE; 1.00A {Acetivibrio cellulolyticus} SCOP: b.2.2.0 PDB: 3zu8_A* 3zqw_A*
Probab=36.89 E-value=12 Score=31.78 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=28.5
Q ss_pred cccce--eeeCCCCEEEEEEEeCCCCCeeEEeCCCCEE
Q 014987 352 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 387 (415)
Q Consensus 352 ~gF~k--v~l~pGes~~V~~~~~~~~~ls~~d~~~~~~ 387 (415)
++|.- -.|.||++.+|.|.|.. .+.+-||...+|-
T Consensus 89 I~F~~~ag~l~pg~~~eiq~Ri~~-~dws~~dqsnDyS 125 (153)
T 3zuc_A 89 IAFSSAAGTLAANTSIEVQGRFAK-SDWTNYNQADDYS 125 (153)
T ss_dssp EEECGGGCEECTTEEEEEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEeCCCCceECCCCceEEEEEEEc-CCCcccccccCcc
Confidence 46665 47999999999999998 8999999876653
No 57
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=36.42 E-value=55 Score=27.74 Aligned_cols=53 Identities=13% Similarity=0.178 Sum_probs=34.3
Q ss_pred HHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh---------------hCCCCEEEEEECCcee
Q 014987 115 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGGPV 178 (415)
Q Consensus 115 ~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~---------------~~~~pvVvVl~~g~P~ 178 (415)
.+..+.+.+||.+|++.= . -+..+|..-+.+|+.+.. ..+|+++++..+|+++
T Consensus 78 ~~~~~~l~~aD~iv~~~P--~---------y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~ 145 (201)
T 1t5b_A 78 DELIAELKAHDVIVIAAP--M---------YNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIH 145 (201)
T ss_dssp HHHHHHHHHCSEEEEECC--C---------BTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCC
T ss_pred HHHHHHHHhCCEEEEEeC--c---------ccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCC
Confidence 445678889999998751 1 234567776788887752 1356666666656653
No 58
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=36.27 E-value=59 Score=34.24 Aligned_cols=57 Identities=11% Similarity=-0.040 Sum_probs=40.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC--CCccceeccc-ceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGF-KKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~--~~p~~~L~gF-~kv~l~pGes~~V~~~~~~ 373 (415)
.+.+++.++|.++.. ..|+++++...-. +.+..++.-= ..+.|+|+|++++.++|+.
T Consensus 497 df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y 556 (692)
T 1vjj_A 497 EVNLVLLLKNLSRDT--KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISY 556 (692)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECH
Confidence 589999999988754 6788887753322 4554444221 2456899999999999876
No 59
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=36.13 E-value=40 Score=29.09 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=26.0
Q ss_pred hHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHH
Q 014987 114 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 161 (415)
Q Consensus 114 ~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la 161 (415)
+.+..+.+.+||.+|++.= --+..+|..=+.+|+.+.
T Consensus 85 ~~~~~~~l~~aD~iv~~~P-----------~y~~~~pa~lK~~iD~~~ 121 (208)
T 2hpv_A 85 FNELTDQFLSADKVVIANP-----------MWNLNVPTRLKAWVDTIN 121 (208)
T ss_dssp HHHHHHHHHHCSEEEEEEE-----------CBTTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEec-----------cccCCCCHHHHHHHHHHh
Confidence 4556778899999998751 124566777777888774
No 60
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=36.07 E-value=1.2e+02 Score=29.59 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=47.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceecccceeeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEE
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHS 394 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~ 394 (415)
.++++++|+=+|+ -.|.++|-+... +.+++++..|.-+..+.++|+|.. . ++|.|.
T Consensus 312 ~~~l~f~~~~~~~----~~v~~~v~d~~~------~~~~~~~~~v~~~~~~~~tl~ls~-~-------------~aGhh~ 367 (391)
T 2xwx_A 312 PIQLDLTLEAQGE----MSAELTVYNHHQ------KPLASWSQAMTDGELKSITLELSE-A-------------KAGHHM 367 (391)
T ss_dssp CCEEEEEEEEESS----EEEEEEEECTTS------CEEEEEEEEECTTCEEEEEEECSC-C-------------CSEEEE
T ss_pred cEEEEEEEEecCc----eEEEEEEEcCCC------CccceeeEEEcCCCcceEEEEccC-C-------------CCccEE
Confidence 4677777776665 557778877654 788999999999998999999986 2 789999
Q ss_pred EEEe
Q 014987 395 LHIG 398 (415)
Q Consensus 395 ~~vg 398 (415)
+.|-
T Consensus 368 lvv~ 371 (391)
T 2xwx_A 368 LVSR 371 (391)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9766
No 61
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=35.50 E-value=11 Score=36.29 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=31.0
Q ss_pred HHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhh----HHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 118 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 118 ~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q----~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
.++++++|+||+..|..+ ..|.+|.+| =... +++.+.+.+.+.+.+++++ .+||.+.
T Consensus 95 ~~a~~~advVvi~aG~pr---kpGmtR~DL--l~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~ 155 (345)
T 4h7p_A 95 RVAFDGVAIAIMCGAFPR---KAGMERKDL--LEMNARIFKEQGEAIAAVAASDCRVVV-VGNPANT 155 (345)
T ss_dssp HHHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHHhCCCCEEEECCCCCC---CCCCCHHHH--HHHhHHHHHHHHHHHHhhccCceEEEE-eCCCcch
Confidence 356889999999987654 334444322 1111 2334455543323344444 4999765
No 62
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=35.15 E-value=46 Score=35.40 Aligned_cols=55 Identities=20% Similarity=0.045 Sum_probs=40.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
.+.+.++|.|..+...+-.|+|-..++... ..+.. -+++.|+||++++|.|.|.+
T Consensus 169 ~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~----~~~~~v~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 169 QLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGL----AQQVLVPAGSARPVAFSVVP 224 (767)
T ss_dssp EEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCC----CEEEEECSSCEEECCEEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCce----eEEEEEcCCCeEEEEEEEEE
Confidence 689999999999888877777765554332 11111 14567999999999999976
No 63
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=34.62 E-value=61 Score=34.12 Aligned_cols=57 Identities=16% Similarity=0.072 Sum_probs=39.2
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC--CCccceeccc-ceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGF-KKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~--~~p~~~L~gF-~kv~l~pGes~~V~~~~~~ 373 (415)
.+.+++.|+|..+.. ..|+++++...-. +.+..++.-= ..+.|+|++++++.++|..
T Consensus 487 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y 546 (695)
T 1g0d_A 487 DFDVIVEVKNEGGRD--AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHY 546 (695)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECH
Confidence 599999999988755 5678877653222 3333333111 2457899999999999886
No 64
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=34.07 E-value=61 Score=34.34 Aligned_cols=57 Identities=11% Similarity=0.114 Sum_probs=40.3
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC--CCccceecc-cceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIG-FKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~--~~p~~~L~g-F~kv~l~pGes~~V~~~~~~ 373 (415)
.+.+++.|+|..+.. ..|+++++...-. +.+..++.- =..+.|+|+|++++.++|..
T Consensus 532 df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y 591 (731)
T 1ex0_A 532 DFKLSITFRNNSHNR--YTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQA 591 (731)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECH
Confidence 599999999988765 6788887653322 444444422 12446899999999999876
No 65
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=33.49 E-value=47 Score=29.10 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=36.5
Q ss_pred hHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh---------------hCCCCEEEEEECCcee
Q 014987 114 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGGPV 178 (415)
Q Consensus 114 ~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~---------------~~~~pvVvVl~~g~P~ 178 (415)
..+..+.+..||.+|++.= --+..+|..-+.+|+.+.. ..+|+++++..+|+||
T Consensus 83 ~~~~~~~~~~aD~iv~~~P-----------~y~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~ 151 (211)
T 3p0r_A 83 ADKYLNQFLEADKVVFGFP-----------LWNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVY 151 (211)
T ss_dssp HHHHHHHHHHCSEEEEEEE-----------CBTTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCEEEEEcC-----------hhcccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCC
Confidence 4556778899999998751 1245667776777777631 1357777777778775
No 66
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=33.23 E-value=1.2e+02 Score=26.91 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=34.6
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccce-eeeCCCCEEEEEEEeCC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKK-VHVTAGALQSVRLDIHV 373 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~k-v~l~pGes~~V~~~~~~ 373 (415)
.+++.|+|+|+. .-.||..+.+.... ..|. .--== ..|+||+.++|+|....
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pf---ivtPPl~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPF---LVMPPLFRLEANQQSQLRIVRTG 82 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSE---EEESSEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCE---EEeCCEEEECCCCceEEEEEECC
Confidence 578899999975 67999999864322 1111 11111 35899999999996543
No 67
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=32.09 E-value=98 Score=33.68 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=39.7
Q ss_pred eEEEEEEEEeCCC-CCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGD-MAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~-~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
.+.+.++|.|..+ .+++--|+|-...+... ..+. ...=+++.|+||++++|.|.|.+
T Consensus 96 ~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 96 QVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp CEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 5899999999998 88776677665433221 1111 01124568999999999999987
No 68
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=32.00 E-value=26 Score=33.43 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=28.7
Q ss_pred HHhhcCCEEEEEcCCCcccccccCCCCCCC-CC-hhhHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 119 VAARQADATVLVMGLDQSIEAEFIDRAGLL-LP-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 119 ~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~-l~-~~q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
++.+++|+||++.|... .+|.+|.+|- -. +--+++++.+.+.+ ...++++ .+||.++
T Consensus 72 ~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilv-vtNPvdi 130 (326)
T 3vku_A 72 SDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLV-AANPVDI 130 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTTT-CCSEEEE-CSSSHHH
T ss_pred HHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEE-ccCchHH
Confidence 46789999999988543 2344454431 11 11245666676543 3445444 4899876
No 69
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=31.34 E-value=86 Score=26.86 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=28.3
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHH
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 161 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la 161 (415)
....+..+.+.+||.+|++. + --+..+|+.-+.+++.+.
T Consensus 56 ~~~~~~~~~i~~AD~iV~~s--P---------~y~~~~p~~lK~~iD~~~ 94 (192)
T 3fvw_A 56 PEVAHAREEVQEADAIWIFS--P---------VYNYAIPGPVKNLLDWLS 94 (192)
T ss_dssp HHHHHHHHHHHHCSEEEEEC--C---------CBTTBCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCEEEEEC--c---------ccccCCCHHHHHHHHHhh
Confidence 34567788899999999875 1 124567777778888775
No 70
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=31.21 E-value=70 Score=26.65 Aligned_cols=53 Identities=9% Similarity=0.035 Sum_probs=32.4
Q ss_pred chHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh-------------hCCCCEEEEEECCc
Q 014987 113 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-------------ASRGPVVLVLMCGG 176 (415)
Q Consensus 113 ~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~-------------~~~~pvVvVl~~g~ 176 (415)
++.+..+.+.+||.+|++.= --+..+|..=+.+++.+.. ..+|+++++...|.
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P-----------~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~ 126 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATP-----------IYWFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGD 126 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEE-----------CBTTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESS
T ss_pred CHHHHHHHHHhCCEEEEEeC-----------ccccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCC
Confidence 45666778899999998751 1134556665667766531 13566666655444
No 71
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=30.51 E-value=12 Score=35.19 Aligned_cols=57 Identities=14% Similarity=0.272 Sum_probs=31.7
Q ss_pred HHhhcCCEEEEEcCCCcccccccCCCCCCC-CCh-hhHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 119 VAARQADATVLVMGLDQSIEAEFIDRAGLL-LPG-RQQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 119 ~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~-l~~-~q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
++++++|+||+..|..+ ..|.+|.+|- .+. --+++++++++.+ ...++++ ..||.+.
T Consensus 65 ~~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlv-vsNPvd~ 123 (294)
T 2x0j_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILV-VTNPMDV 123 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEE-CSSSHHH
T ss_pred HHhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEE-ecCcchh
Confidence 35789999999998654 2233443221 000 0124555666543 3445444 4999885
No 72
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=30.48 E-value=87 Score=26.75 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=39.4
Q ss_pred ccchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh----------hCCCCEEEEEECCcee
Q 014987 111 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK----------ASRGPVVLVLMCGGPV 178 (415)
Q Consensus 111 ~~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~----------~~~~pvVvVl~~g~P~ 178 (415)
..++.+..+.+..||.+|+.. + --+..+|..-+.+++++.. ..+|++++++.+|.|.
T Consensus 39 ~~D~~~~~~~l~~aD~iV~~~--P---------~y~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 39 DFNVEQEQSLLLQNDRIILEF--P---------LYWYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp TCCHHHHHHHHHTCSEEEEEE--E---------CBTTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred cccHHHHHHHHHhCCEEEEEC--C---------hhhccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 356677789999999999875 1 1245667766777776521 2467887777778775
No 73
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=30.41 E-value=1.5e+02 Score=23.08 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=30.7
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-C---CccceecccceeeeCCCCE-EEEEEEeCC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-W---SPNKQLIGFKKVHVTAGAL-QSVRLDIHV 373 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~-~---~p~~~L~gF~kv~l~pGes-~~V~~~~~~ 373 (415)
.+.|+|+-+|...|.-.|..-..+-... + .|. . ..+..+|||+ +++++.|-.
T Consensus 20 ~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~---~--g~l~F~~Get~k~i~V~I~d 76 (114)
T 3e9t_A 20 EFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGR---K--GLLSFPPGVDEQRFRIEVID 76 (114)
T ss_dssp EEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCC---E--EEEEECTTCCEEEEEEEBCC
T ss_pred EEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEc---c--eEEEEeCCcEEEEEEEEEEc
Confidence 4666777777777777777554443221 1 222 1 3556799996 566666653
No 74
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=29.59 E-value=70 Score=24.07 Aligned_cols=19 Identities=5% Similarity=0.193 Sum_probs=14.8
Q ss_pred cceeeeCCCCEEEEEEEeC
Q 014987 354 FKKVHVTAGALQSVRLDIH 372 (415)
Q Consensus 354 F~kv~l~pGes~~V~~~~~ 372 (415)
+....+.||++.+++|+.+
T Consensus 61 ~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 61 HSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp EEEEECSTTCEEEEEECTT
T ss_pred ccccccCCCCeEEEEEecC
Confidence 4446789999999988764
No 75
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=29.17 E-value=68 Score=28.46 Aligned_cols=54 Identities=13% Similarity=0.268 Sum_probs=34.8
Q ss_pred hHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHhh----------------CCCCEEEEEECCce
Q 014987 114 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKA----------------SRGPVVLVLMCGGP 177 (415)
Q Consensus 114 ~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~~----------------~~~pvVvVl~~g~P 177 (415)
..+..+.+..||.+|+..= --+..+|..-+.+++.+... .+|+++++..+|++
T Consensus 85 ~~~l~~~~~~aD~iv~~~P-----------~y~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~ 153 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLP-----------LHNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGI 153 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEE-----------CBTTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSC
T ss_pred HHHHHHHHHhCCEEEEEcC-----------hhhccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCC
Confidence 3456788899999998751 12456777777788776421 24566666555665
Q ss_pred e
Q 014987 178 V 178 (415)
Q Consensus 178 ~ 178 (415)
|
T Consensus 154 ~ 154 (223)
T 3u7i_A 154 Y 154 (223)
T ss_dssp C
T ss_pred C
Confidence 4
No 76
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=28.98 E-value=38 Score=32.33 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=31.9
Q ss_pred HHHhhcCCEEEEEcCCCcccccccCCCCCCCCChh----hHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 118 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGR----QQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 118 ~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~----q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
.++.+++|+||++.|... ..|.+|.++ -.. -+++++++.+...+-+++++ .+||.++
T Consensus 74 ~~~~~daDvVvitAg~pr---kpG~tR~dl--l~~N~~i~~~i~~~i~~~~~~~~~viv-vsNPvd~ 134 (333)
T 5mdh_A 74 EIAFKDLDVAILVGSMPR---RDGMERKDL--LKANVKIFKCQGAALDKYAKKSVKVIV-VGNPANT 134 (333)
T ss_dssp HHHTTTCSEEEECCSCCC---CTTCCTTTT--HHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHHhCCCCEEEEeCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhCCCCeEEEE-cCCchHH
Confidence 456789999999877543 234444332 121 23455666654322233444 4899876
No 77
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=28.76 E-value=1.5e+02 Score=33.63 Aligned_cols=62 Identities=16% Similarity=0.129 Sum_probs=41.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC--CCccceecccceeeeCCCCEEEEEEEeCCCCCe
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHL 377 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~--~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~l 377 (415)
.+.+.++|.|..+.+++--|+|....+... ..+.+....=+++.|++|++++|.|.|.+ ..+
T Consensus 681 ~~~l~~~v~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~f~i~~-~~~ 744 (1325)
T 2pn5_A 681 AVVLQFTLFNNLGAEYIADVTLYNVANQTEFVGRPNTDLSYTKSVSVPPKVGVPISFLIKA-RKL 744 (1325)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEECGGGCEEETTSCTTCCEEEEEEEECTTCCEEEEEEEEE-CSS
T ss_pred EEEEEEEEEeCCCCcEEEEEEEeecCCceEEeccCCCCCcceEEEEECCCCeEEEEEEEEE-ccc
Confidence 689999999999988887777765432110 11111111114578999999999999987 544
No 78
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=28.58 E-value=1.1e+02 Score=35.33 Aligned_cols=55 Identities=13% Similarity=0.000 Sum_probs=39.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEeCC
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 373 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~~~ 373 (415)
.+.+.++|.|..+..++--|+|-....... ..+.. =+.+.|.+|++++|.|.|.+
T Consensus 784 ~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~----~~~v~l~~~~~~~v~f~v~p 839 (1451)
T 4acq_A 784 AFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKE----QAPHCICANGRQTVSWAVTP 839 (1451)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSC----CCCEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCC----ceEEEECCCCeEEEEEEEEE
Confidence 589999999999888777777765433221 11100 25678999999999999987
No 79
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=28.56 E-value=2e+02 Score=25.58 Aligned_cols=52 Identities=12% Similarity=0.112 Sum_probs=32.5
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC--CCccceecccce-eeeCCCCEEEEEEEeC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKK-VHVTAGALQSVRLDIH 372 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~--~~p~~~L~gF~k-v~l~pGes~~V~~~~~ 372 (415)
.+++.|+|+|+.. .-.||.++.+.... ..|. .--== ..|+||+..+|+|...
T Consensus 17 ~~sl~l~N~~~~~-p~LvQsWid~~~~~~~~~pf---ivtPPlfRlep~~~q~lRIi~~ 71 (224)
T 3gfu_C 17 ALTITVTNNDKER-TFGGQAWVDNIVEKDTRPTF---VVTPSFFKVKPNGQQTLRIIMA 71 (224)
T ss_dssp CEEEEEEECCSSC-CEEEEEEEEESSCCSCSCSE---EEESSEEEECTTCEEEEEEEEC
T ss_pred eEEEEEEeCCCCc-cEEEEEEEecCCCCcccCCE---EEcCCeEEECCCCceEEEEEEC
Confidence 4789999999643 46799999863221 1110 00000 2489999999999543
No 80
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=28.33 E-value=53 Score=27.99 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=33.0
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh-----hCCCCEEEEEECCc
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGG 176 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~-----~~~~pvVvVl~~g~ 176 (415)
.++.+..+.+.+||.+|++. +. -+..+|+.=+.+++.+.. ..+||++++...|+
T Consensus 61 ~~~~~~~~~l~~aD~ii~~s--P~---------y~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg 119 (193)
T 1rtt_A 61 PAVERFREQIRAADALLFAT--PE---------YNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAG 119 (193)
T ss_dssp HHHHHHHHHHHHCSEEEEEC--CE---------ETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEEc--cc---------cccCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCC
Confidence 34566678889999999875 11 133456666778887742 23566555554333
No 81
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=28.06 E-value=1.1e+02 Score=26.39 Aligned_cols=39 Identities=23% Similarity=0.333 Sum_probs=28.2
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHH
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 161 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la 161 (415)
....+..+.+++||.+|++.= . -+..+|+.=+.+++.+.
T Consensus 61 ~~~~~l~~~i~~AD~iv~~sP--~---------y~~~~~~~lK~~iD~~~ 99 (193)
T 3svl_A 61 ATVEALAEQIRQADGVVIVTP--E---------YNYSVPGGLKNAIDWLS 99 (193)
T ss_dssp HHHHHHHHHHHHSSEEEEEEC--C---------BTTBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCEEEEEec--c---------cCCCCCHHHHHHHHHHh
Confidence 445667888999999998751 1 24567777778888775
No 82
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=28.01 E-value=26 Score=33.55 Aligned_cols=54 Identities=19% Similarity=0.120 Sum_probs=31.9
Q ss_pred HhhcCCEEEEEcCCCcccccccCCCCCCCCChhh----HHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 120 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 120 ~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q----~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
.+++||+||++.|... .+|.+|.++ -... +++++++.+.+ ...++++ .+||.++
T Consensus 86 ~~~daDiVIitaG~p~---kpG~tR~dl--l~~N~~I~k~i~~~I~k~~-P~a~ilv-vtNPvdi 143 (330)
T 3ldh_A 86 VSAGSKLVVITAGARQ---QEGESRLNL--VQRNVNIFKFIIPNIVKHS-PDCLKEL-HPELGTD 143 (330)
T ss_dssp SCSSCSEEEECCSCCC---CSSCCTTGG--GHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHH
T ss_pred HhCCCCEEEEeCCCCC---CCCCCHHHH--HHhhHHHHHHHHHHHHhhC-CCceEEe-CCCccHH
Confidence 3789999999988654 334445432 2222 34555666543 3445444 4899876
No 83
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=27.82 E-value=1.5e+02 Score=26.33 Aligned_cols=52 Identities=19% Similarity=0.225 Sum_probs=33.1
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC---CCccceecccce-eeeCCCCEEEEEEEeC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKK-VHVTAGALQSVRLDIH 372 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~---~~p~~~L~gF~k-v~l~pGes~~V~~~~~ 372 (415)
.+++.|+|+|+. -.-.||..+.+.... ..| +.--== ..|+||++++|+|...
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~~~p---fivtPPl~rl~p~~~q~lRI~~~ 72 (218)
T 2xg5_A 17 SMTLDISNDNKQ-LPYLAQAWIENENQEKIITGP---VIATPPVQRLEPGAKSMVRLSTT 72 (218)
T ss_dssp EEEEEEEECCSS-SCEEEEEEEECTTSCEECSSS---EEEECSEEEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccccCC---EEEcCCeEEECCCCceEEEEEec
Confidence 588999999953 157999999863321 011 111111 2489999999999543
No 84
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=27.78 E-value=1.4e+02 Score=26.13 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=32.7
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEE
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLD 370 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~ 370 (415)
.+++.|+|+|+- -.-.||..+.+.... ..|...+=-. ..|+||++++|+|.
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~ 68 (206)
T 1l4i_A 17 QVQLAVTNNDDK-SSYLIQSWIENAEGKKDARFVITPPL--FSMQGKKENTLRII 68 (206)
T ss_dssp EEEEEEEECCTT-CEEEEEEEEEETTSCBCSSEEEESSE--EEEESSEEEEEEEE
T ss_pred EEEEEEEeCCCC-ccEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEE
Confidence 588999999852 268999999863221 1121111111 24789999999997
No 85
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=27.74 E-value=1.4e+02 Score=26.19 Aligned_cols=52 Identities=8% Similarity=0.032 Sum_probs=33.5
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEe
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDI 371 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~ 371 (415)
.+++.|+|+|+. -.-.||..+.+.... ..|...+=-. ..|+||++++|+|..
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 17 QVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPL--FAMKGKKENTLRILD 69 (205)
T ss_dssp EEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSE--EEECSSEEEEEEEEE
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEEe
Confidence 688999999953 157999999864322 1121100000 357899999999976
No 86
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=27.47 E-value=1.7e+02 Score=23.31 Aligned_cols=51 Identities=4% Similarity=0.083 Sum_probs=28.2
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceeccc----ceeeeCCCCE-EEEEEEeC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGF----KKVHVTAGAL-QSVRLDIH 372 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF----~kv~l~pGes-~~V~~~~~ 372 (415)
.++|+|+-+|.-.|.-.|. |-..+.+.... ..| ..+..+|||+ +++++.|-
T Consensus 23 ~~~v~V~R~gg~~g~v~V~-y~T~dgTA~ag----~Dy~~~~g~l~F~~Get~k~i~V~I~ 78 (123)
T 3fso_A 23 VARIPVIRRVLDGGKSQVS-YRTQDGTAQGN----RDYIPVEGELLFQPGEAWKELQVKLL 78 (123)
T ss_dssp EEEEEEEEESCCSSCEEEE-EEEEESSSCBT----TTBCCCEEEEEECTTCCEEEEEEEBC
T ss_pred EEEEEEEEeCCCCceEEEE-EEeeCCcEeCC----ccccccceEEEECCCCeEEEEEEEEE
Confidence 4667777777777875555 43332222100 122 2345699997 55555554
No 87
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=27.18 E-value=76 Score=27.52 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=38.3
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh-----------hCCCCEEEEEECCcee
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----------ASRGPVVLVLMCGGPV 178 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~-----------~~~~pvVvVl~~g~P~ 178 (415)
.++.+..+.+..||.+|+.. + --+..+|..-+.+++++.. ..+|+++++..+|.|.
T Consensus 47 ~dv~~~~~~l~~AD~iv~~~--P---------~y~~~~pa~lK~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~ 113 (192)
T 3f2v_A 47 IDVAAEQKLIETHDSLVWQF--P---------IYWFNCPPLLKQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPA 113 (192)
T ss_dssp CCHHHHHHHHHTSSSEEEEE--E---------CBTTBCCHHHHHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCG
T ss_pred hhHHHHHHHHHhCCEEEEEc--C---------hhhcCCCHHHHHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCCh
Confidence 45677788999999999875 1 1245667766777777631 2357777777777774
No 88
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=26.97 E-value=19 Score=35.10 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=30.4
Q ss_pred HHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhh----HHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 118 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 118 ~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q----~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
.++.+++|+||++.|... .+|.+|.+| =... +++++++.+..+...++++ .+||.++
T Consensus 103 y~~~~daDvVVitag~pr---kpG~tR~DL--l~~N~~I~k~i~~~i~~~a~p~~ivlV-vsNPvD~ 163 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKPR---GPGMERAAL--LDINGQIFADQGKALNAVASKNVKVLV-VGNPCNT 163 (375)
T ss_dssp HHHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHHhCCCCEEEEcCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhcCCCeEEEE-ecCchhH
Confidence 467899999999877543 233334221 1111 2233345442233445544 4899876
No 89
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=26.74 E-value=16 Score=34.41 Aligned_cols=57 Identities=16% Similarity=0.309 Sum_probs=30.9
Q ss_pred HHhhcCCEEEEEcCCCcccccccCCCCCCCC-C-hhhHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 119 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 119 ~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l-~-~~q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
+++++||+||++.|.+. .+|.+|.++-. . +--+++++++.+. +...++++. +||.++
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivv-sNPvd~ 123 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV-TNPMDV 123 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe-CCcchH
Confidence 46789999999988553 22333322200 0 0112344555553 334555544 899886
No 90
>2l8a_A Endoglucanase; carbohydrate-binding module, family 3, hydrolase; NMR {Bacillus subtilis}
Probab=26.65 E-value=12 Score=31.49 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=28.9
Q ss_pred cccceeeeCCCC-EEEEEEEeCCCCCeeEEeCCCCEEe
Q 014987 352 IGFKKVHVTAGA-LQSVRLDIHVCKHLSVVDKFGIRRI 388 (415)
Q Consensus 352 ~gF~kv~l~pGe-s~~V~~~~~~~~~ls~~d~~~~~~~ 388 (415)
++|....|.||+ +..|.|.|.. .+.+.||...+|-.
T Consensus 86 I~f~~g~l~pg~~s~eiq~ri~~-~dws~~dqsNDyS~ 122 (149)
T 2l8a_A 86 LGFKNGTLAPGASTGNIQLRLHN-DDWSNYAQSGDYSF 122 (149)
T ss_dssp EEECCSCSSTTSSSSCEEEEEEC-CTTSCCCTTTTTTT
T ss_pred EEeCCCeECCCCCceEEEEEEEc-CCCCccccCCCccc
Confidence 577777899984 5899999998 89999998776543
No 91
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=26.61 E-value=2.5e+02 Score=22.58 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=32.3
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-C---CccceecccceeeeCCCCE-EEEEEEeCC
Q 014987 317 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-W---SPNKQLIGFKKVHVTAGAL-QSVRLDIHV 373 (415)
Q Consensus 317 ~vsv~V~NtG~~~G~evvQlY~~~~~~~-~---~p~~~L~gF~kv~l~pGes-~~V~~~~~~ 373 (415)
.+.++|+-+|...|.-.|.....+-... . .+. -..+..+|||+ +++++.|-.
T Consensus 22 ~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~-----~g~l~F~~Get~k~i~V~I~d 78 (137)
T 3ead_A 22 EFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGR-----KGLLSFPPGVDEQRFRIEVID 78 (137)
T ss_dssp EEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCC-----EEEEEECTTCCEEEEEEEBCC
T ss_pred EEEEEEEEECCCCceEEEEEEeECCCcCCCCcEeEe-----eEEEEECCCceEEEEEEEEec
Confidence 4677777788888877777665543322 1 122 13556799997 666666653
No 92
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=25.77 E-value=49 Score=26.81 Aligned_cols=26 Identities=8% Similarity=-0.050 Sum_probs=20.4
Q ss_pred eeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 357 VHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 357 v~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
..|.|||+.+++|+.+ .+|+|.+++.
T Consensus 99 ~~l~pGet~~v~f~~~----------------~pG~y~f~C~ 124 (139)
T 2aan_A 99 PLANGNETVEVTFTAP----------------AAGTYLYICT 124 (139)
T ss_dssp CCBCTTCEEEEEEECC----------------SSEEEEEECC
T ss_pred cccCCCCEEEEEEECC----------------CCeEEEEEcC
Confidence 4589999999999874 3588888765
No 93
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=25.51 E-value=17 Score=34.66 Aligned_cols=57 Identities=21% Similarity=0.251 Sum_probs=30.9
Q ss_pred HHhhcCCEEEEEcCCCcccccccCCCCCCC-CC-hhhHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 119 VAARQADATVLVMGLDQSIEAEFIDRAGLL-LP-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 119 ~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~-l~-~~q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
++++++|+||++.|.+. .+|.+|.++- .. .--.++++++.+.+ ...++++ .+||.++
T Consensus 69 ~a~~~aDvVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlv-vtNPvd~ 127 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMASG-FDGIFLV-ATNPVDI 127 (326)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHH
T ss_pred HHhCCCCEEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEE-cCChHHH
Confidence 46789999999988543 2233332210 00 11234555665533 3444444 4899876
No 94
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=24.52 E-value=17 Score=34.47 Aligned_cols=57 Identities=16% Similarity=0.301 Sum_probs=28.4
Q ss_pred HHhhcCCEEEEEcCCCcccccccCCCCCCCC-C-hhhHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 119 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 119 ~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l-~-~~q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
+++++||+||++.|.+. .+|.+|.++-. + +--+++.+.+.+. +...++++ .+||.++
T Consensus 65 ~a~~~aDvVii~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~viv-vtNPvd~ 123 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIV-VANPLDV 123 (314)
T ss_dssp GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEE-CCSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEe-cCCchhH
Confidence 46789999999988553 22333322110 0 1123444555553 33445444 4899876
No 95
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=24.52 E-value=18 Score=34.33 Aligned_cols=58 Identities=26% Similarity=0.411 Sum_probs=31.2
Q ss_pred HHHhhcCCEEEEEcCCCcccccccCCCCCCC-CC-hhhHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 118 EVAARQADATVLVMGLDQSIEAEFIDRAGLL-LP-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 118 ~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~-l~-~~q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
.++.+++|+||++.|.+. .+|.+|.+|- .. .--+++++++.+.+ ...+++++ +||.++
T Consensus 64 ~~~~~~aDivii~ag~~r---kpG~~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvv-tNPvd~ 123 (312)
T 3hhp_A 64 TPALEGADVVLISAGVAR---KPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGII-TNPVNT 123 (312)
T ss_dssp HHHHTTCSEEEECCSCSC---CTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEC-SSCHHH
T ss_pred HHHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEe-cCcchh
Confidence 356789999999988553 2233332210 00 11123445555543 34454444 899876
No 96
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=24.52 E-value=16 Score=34.64 Aligned_cols=57 Identities=21% Similarity=0.356 Sum_probs=31.4
Q ss_pred HHhhcCCEEEEEcCCCcccccccCCCCCCCCC--hhhHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 119 VAARQADATVLVMGLDQSIEAEFIDRAGLLLP--GRQQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 119 ~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~--~~q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
++++++|+||++.|.+. .+|.+|.++-.- .--+++++++.+.+ ...++++ .+||.++
T Consensus 74 ~a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlv-vsNPvd~ 132 (315)
T 3tl2_A 74 ADTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVV-LTNPVDA 132 (315)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CCSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE-CCChHHH
Confidence 46789999999988654 223333221100 01234555665543 3445444 4899876
No 97
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=24.15 E-value=79 Score=27.33 Aligned_cols=51 Identities=10% Similarity=0.061 Sum_probs=34.0
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh--hCCCCEEEEEE
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK--ASRGPVVLVLM 173 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~--~~~~pvVvVl~ 173 (415)
..+.+..+.+.+||.+|++.= --+..+|+.=+.+|+.+.. ..+||++++..
T Consensus 74 ~~~~~~~~~i~~AD~ivi~sP-----------~Y~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t 126 (191)
T 3k1y_A 74 TKLEEITSALSASDGLVVATP-----------VFKASYTGLFKMFFDILDTDALTGMPTIIAAT 126 (191)
T ss_dssp HHHHHHHHHHHHCSEEEEEEE-----------CBTTBSCHHHHHHHHHSCTTTTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCEEEEEcC-----------ccCCcCcHHHHHHHHHhhhhhcCCCEEEEEEe
Confidence 456778889999999998751 1245667766777776641 24677666554
No 98
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=24.06 E-value=1.5e+02 Score=34.63 Aligned_cols=60 Identities=8% Similarity=-0.052 Sum_probs=39.6
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCccceecccceeeeCCCCEEEEEEEeCCCCCe
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHL 377 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~-~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~l 377 (415)
.+.+.++|.|-.+..-+--|+|........ ..+. -..-+.+.|+||++++|.|.|.+ ..+
T Consensus 829 q~~l~v~VfNy~~~~~~V~V~L~~s~~~~~~~~~~--~~~~q~v~v~a~~~~~v~f~i~p-~~~ 889 (1642)
T 3prx_B 829 QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG--QRYRQQFPIKALSSRAVPFVIVP-LEQ 889 (1642)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS--SCCEEEEEECSSEEEEEEEEEEE-CSC
T ss_pred EEEEEEEEEcCCCCcEEEEEEEEcCCCeEeeccCC--CcceeEEEECCCCeEEEEEEEEE-eec
Confidence 589999999998877665566654432211 1111 01124568999999999999987 544
No 99
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=23.83 E-value=1.1e+02 Score=27.08 Aligned_cols=55 Identities=18% Similarity=0.197 Sum_probs=34.9
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHH---------------hhCCCCEEEEEECCc
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA---------------KASRGPVVLVLMCGG 176 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la---------------~~~~~pvVvVl~~g~ 176 (415)
.++.+..+.++.||.+|+..= --+..+|..-+.+++.+. ...+|++++++.+|.
T Consensus 81 dd~~~~~~~l~~aD~iv~~~P-----------~y~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~ 149 (228)
T 3tem_A 81 SDITDEQKKVREADLVIFQFP-----------LYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGG 149 (228)
T ss_dssp HHHHHHHHHHHHCSEEEEEEE-----------CBTTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECC-----------hhhcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCC
Confidence 345556778899999998751 123455666666776652 123677777777676
Q ss_pred e
Q 014987 177 P 177 (415)
Q Consensus 177 P 177 (415)
|
T Consensus 150 ~ 150 (228)
T 3tem_A 150 T 150 (228)
T ss_dssp C
T ss_pred C
Confidence 6
No 100
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=23.33 E-value=1.1e+02 Score=27.81 Aligned_cols=55 Identities=20% Similarity=0.157 Sum_probs=37.1
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh---------------hCCCCEEEEEECCc
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 176 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~---------------~~~~pvVvVl~~g~ 176 (415)
.++.+..+.+..||.+|+..= --+..+|..=+.+|+.+.. ..+|++++++.+|+
T Consensus 82 dd~~~~~~~l~~AD~IV~~~P-----------~y~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg 150 (273)
T 1d4a_A 82 PDIVAEQKKLEAADLVIFQFP-----------LQWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGG 150 (273)
T ss_dssp HHHHHHHHHHHHCSEEEEEEE-----------CBTTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECc-----------hhhccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCC
Confidence 345666778999999998751 1245566666677776631 13678888877787
Q ss_pred e
Q 014987 177 P 177 (415)
Q Consensus 177 P 177 (415)
|
T Consensus 151 ~ 151 (273)
T 1d4a_A 151 S 151 (273)
T ss_dssp C
T ss_pred C
Confidence 7
No 101
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=23.01 E-value=21 Score=34.10 Aligned_cols=54 Identities=24% Similarity=0.329 Sum_probs=31.5
Q ss_pred HhhcCCEEEEEcCCCcccccccCCCCCCCCChh----hHHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 120 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGR----QQELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 120 ~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~----q~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
.++++|+||++.|... .+|.+|.+| -.. -+++.+++.+.+ ...++++ .+||.++
T Consensus 84 ~~~~aDiVvi~aG~~~---kpG~tR~dL--~~~N~~I~~~i~~~i~~~~-p~a~vlv-vtNPvdi 141 (331)
T 4aj2_A 84 VTANSKLVIITAGARQ---QEGESRLNL--VQRNVNIFKFIIPNVVKYS-PQCKLLI-VSNPVDI 141 (331)
T ss_dssp GGTTEEEEEECCSCCC---CTTCCGGGG--HHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHH
T ss_pred HhCCCCEEEEccCCCC---CCCccHHHH--HHHHHHHHHHHHHHHHHHC-CCeEEEE-ecChHHH
Confidence 5789999999988654 234445432 111 134455565543 3445444 4899876
No 102
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=22.89 E-value=1.1e+02 Score=27.20 Aligned_cols=55 Identities=9% Similarity=0.007 Sum_probs=36.0
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHHh------hCCCCEEEEEECCce
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK------ASRGPVVLVLMCGGP 177 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la~------~~~~pvVvVl~~g~P 177 (415)
.++.+..+.+.+||.+|++.= --+..+|+.=+.+++.+.. ..+||++++...|.+
T Consensus 68 ~~~~~~~~~l~~AD~iI~~sP-----------~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~ 128 (242)
T 1sqs_A 68 DDGGVIKKELLESDIIIISSP-----------VYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESN 128 (242)
T ss_dssp STHHHHHHHHHHCSEEEEEEE-----------ECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSC
T ss_pred HHHHHHHHHHHHCCEEEEEcc-----------ccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCC
Confidence 456677888999999999751 1234566666677777621 246777776665554
No 103
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=22.19 E-value=1.9e+02 Score=24.85 Aligned_cols=39 Identities=15% Similarity=-0.030 Sum_probs=27.5
Q ss_pred cchHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHHH
Q 014987 112 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 161 (415)
Q Consensus 112 ~~~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~la 161 (415)
.++.+..+.+.+||.+|++.= --+..+|..-+.+|+.+.
T Consensus 59 ~d~~~~~~~l~~AD~iV~~~P-----------~y~~s~pa~LK~~iDrv~ 97 (204)
T 2amj_A 59 YDVKAEVQNFLWADVVIWQMP-----------GWWMGAPWTVKKYIDDVF 97 (204)
T ss_dssp CCHHHHHHHHHHCSEEEEEEE-----------CBTTBCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCEEEEECC-----------ccccCCCHHHHHHHHHHh
Confidence 456778889999999998751 124566776667777653
No 104
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=21.82 E-value=69 Score=24.04 Aligned_cols=27 Identities=11% Similarity=0.096 Sum_probs=19.5
Q ss_pred cceeeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 354 FKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 354 F~kv~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
|....+.||++.+++| + .+|.|.+++.
T Consensus 58 ~~~~~~~~g~~~~~tf--~----------------~~G~y~y~C~ 84 (98)
T 1iuz_A 58 YDDYLNSKGETVVRKL--S----------------TPGVYGVYCE 84 (98)
T ss_dssp EEEEECSTTCEEEEEC--C----------------SCEEEEEECT
T ss_pred ccccccCCCCEEEEEc--C----------------CCEEEEEEch
Confidence 3446789999988877 2 4588877765
No 105
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=21.70 E-value=36 Score=32.18 Aligned_cols=55 Identities=22% Similarity=0.328 Sum_probs=27.2
Q ss_pred HHhhcCCEEEEEcCCCcccccccCCCCCCCCChhh----HHHHHHHHhhCCCCEEEEEECCceeec
Q 014987 119 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 180 (415)
Q Consensus 119 ~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q----~~li~~la~~~~~pvVvVl~~g~P~~l 180 (415)
+++++||+||+..|... ..|..|.++ -... .++++.+.+.+ ...++++ ..||.++
T Consensus 68 ~a~~~aDvVii~ag~~~---~~g~~R~dl--~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNPv~~ 126 (318)
T 1ez4_A 68 SDCKDADLVVITAGAPQ---KPGESRLDL--VNKNLNILSSIVKPVVDSG-FDGIFLV-AANPVDI 126 (318)
T ss_dssp GGGTTCSEEEECCCC-------------C--HHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhC-CCeEEEE-eCCcHHH
Confidence 45789999999987543 223444433 1222 23444554433 3444444 4999886
No 106
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=20.95 E-value=1.2e+02 Score=31.67 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=36.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceecccce--eeeCCCCEEEE---EEEeCCCCCe
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKK--VHVTAGALQSV---RLDIHVCKHL 377 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF~k--v~l~pGes~~V---~~~~~~~~~l 377 (415)
.++++++++|+......=.|.+=+.-.. +++|=.+ +.|.+|++.++ +++++. .+|
T Consensus 23 ~V~l~~~l~n~t~~~~~gtv~~~v~hl~-------~~V~~~~~~~~l~~G~s~~~~~~~~~~P~-~df 82 (643)
T 3vmn_A 23 AVHLNLTLNNTTSLAQNITATAEVYSLE-------NKLKTLQYTKYLLPNESYTTQKGEFVIPA-NSL 82 (643)
T ss_dssp CEEEECEEECCSSSCEEEEEEEEEEETT-------EEEEEEEEEEEECTTCEEECCTTSEEECT-TSS
T ss_pred eEEEEEEEecccCccceeEEEEEEEecc-------cccccceEEEEecCCCcceeeeeeeecCc-ccc
Confidence 6999999999887654444443222211 2333333 47899999888 788887 888
No 107
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=20.11 E-value=2.3e+02 Score=29.66 Aligned_cols=62 Identities=13% Similarity=0.100 Sum_probs=38.2
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCccceecccceeeeCCCCEEEEEEEeCCCCCeeEEe
Q 014987 315 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVD 381 (415)
Q Consensus 315 ~~~vsv~V~NtG~~~G~evvQlY~~~~~~~~~p~~~L~gF~kv~l~pGes~~V~~~~~~~~~ls~~d 381 (415)
.++|.++|.|.+.....-.|++=+.++.+. .+ ...-..+.+.++++.++++++.. .+...|+
T Consensus 188 ~v~v~~~v~n~~~~~~~~~v~~~l~d~~g~--~v--~~~~~~~~~~~~~~~~~~~~~~v-~~p~LWs 249 (692)
T 3fn9_A 188 DITVKVKLDNAGLQPAAVTLENTIYTQEGQ--KV--GTHSRSFDLSPQGTQTYLSTFKL-KNPHLWQ 249 (692)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECTTSC--EE--EEEEEEEEECSSSCEEEEEEEEE-ESCCCCC
T ss_pred EEEEEEEEEeCCCCceeEEEEEEEECCCCC--EE--EEEEeEEEecCCCeEEEEEEEEc-CCceeCC
Confidence 578888999987665544555555554431 11 11112356788887777777766 6667786
No 108
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=20.10 E-value=77 Score=23.08 Aligned_cols=27 Identities=11% Similarity=0.114 Sum_probs=19.8
Q ss_pred cceeeeCCCCEEEEEEEeCCCCCeeEEeCCCCEEecCeEEEEEEe
Q 014987 354 FKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 398 (415)
Q Consensus 354 F~kv~l~pGes~~V~~~~~~~~~ls~~d~~~~~~~~~G~~~~~vg 398 (415)
+....+.||++.+++| . .+|.|.+++.
T Consensus 51 ~~~~~~~~g~~~~~~f---~---------------~~G~y~~~C~ 77 (91)
T 1bxv_A 51 HKDLAFSPGETFEATF---S---------------EPGTYTYYCE 77 (91)
T ss_dssp EEEEECSTTCEEEEEC---C---------------SCEEEEEECT
T ss_pred cccceeCCCCEEEEEe---C---------------CCEEEEEEeC
Confidence 5566789999877766 2 4688888765
No 109
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=20.06 E-value=1.4e+02 Score=25.64 Aligned_cols=36 Identities=8% Similarity=0.068 Sum_probs=25.6
Q ss_pred hHHHHHHhhcCCEEEEEcCCCcccccccCCCCCCCCChhhHHHHHHH
Q 014987 114 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRV 160 (415)
Q Consensus 114 ~~~a~~~a~~aD~vIv~~g~~~~~e~eg~dr~~l~l~~~q~~li~~l 160 (415)
..+..+.+..||.+|++.= --+..+|..=+.+|+.+
T Consensus 78 ~~~~~~~l~~AD~iV~~~P-----------~y~~~~pa~lK~~iD~~ 113 (212)
T 3r6w_A 78 SDQLVGELFDSDLLVISTP-----------MYNFSVPSGLKAWIDQI 113 (212)
T ss_dssp HHHHHHHHHHCSEEEEEEE-----------CBTTBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEEcC-----------cccccCCHHHHHHHHHH
Confidence 3455678899999998751 12456777777788877
Done!