Query 014990
Match_columns 415
No_of_seqs 135 out of 2394
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 04:43:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lqt_A FPRA; NADP+ derivative, 100.0 2.4E-44 8.2E-49 363.0 31.0 374 18-413 2-384 (456)
2 1cjc_A Protein (adrenodoxin re 100.0 4.3E-44 1.5E-48 361.5 32.8 380 18-413 5-392 (460)
3 2vdc_G Glutamate synthase [NAD 100.0 2.7E-40 9.1E-45 333.2 20.8 316 17-414 120-442 (456)
4 4gcm_A TRXR, thioredoxin reduc 100.0 4E-34 1.4E-38 274.3 24.6 285 17-414 4-304 (312)
5 4a5l_A Thioredoxin reductase; 100.0 3.5E-34 1.2E-38 274.4 24.0 287 18-414 3-310 (314)
6 3itj_A Thioredoxin reductase 1 100.0 6.7E-34 2.3E-38 274.7 24.1 292 14-414 17-333 (338)
7 3r9u_A Thioredoxin reductase; 100.0 2E-33 6.9E-38 268.7 25.9 283 18-414 3-310 (315)
8 1gte_A Dihydropyrimidine dehyd 100.0 8.9E-34 3E-38 311.2 22.0 311 18-413 186-505 (1025)
9 2q7v_A Thioredoxin reductase; 100.0 2.1E-32 7.1E-37 263.7 28.7 282 18-413 7-309 (325)
10 1fl2_A Alkyl hydroperoxide red 100.0 1.8E-32 6.3E-37 262.0 27.2 280 20-413 2-302 (310)
11 3cty_A Thioredoxin reductase; 100.0 1.3E-32 4.3E-37 264.5 25.7 284 18-414 15-314 (319)
12 3f8d_A Thioredoxin reductase ( 100.0 2.5E-32 8.4E-37 261.9 26.5 281 19-413 15-314 (323)
13 2q0l_A TRXR, thioredoxin reduc 100.0 2.9E-32 9.8E-37 260.8 26.7 282 20-413 2-306 (311)
14 3lzw_A Ferredoxin--NADP reduct 100.0 2.8E-32 9.6E-37 262.7 24.1 282 18-413 6-312 (332)
15 1vdc_A NTR, NADPH dependent th 100.0 7.4E-32 2.5E-36 260.5 26.8 287 18-413 7-320 (333)
16 2a87_A TRXR, TR, thioredoxin r 100.0 3.6E-32 1.2E-36 263.4 24.4 285 17-414 12-314 (335)
17 1trb_A Thioredoxin reductase; 100.0 5.2E-32 1.8E-36 259.9 23.2 288 18-414 4-312 (320)
18 3oc4_A Oxidoreductase, pyridin 100.0 4.8E-32 1.7E-36 273.3 23.9 289 20-413 3-313 (452)
19 2zbw_A Thioredoxin reductase; 100.0 1.2E-31 4.2E-36 259.1 25.6 286 18-413 4-314 (335)
20 3lxd_A FAD-dependent pyridine 100.0 2E-32 6.9E-37 273.1 18.3 291 17-413 7-320 (415)
21 4eqs_A Coenzyme A disulfide re 100.0 2.5E-32 8.7E-37 274.1 17.9 280 20-413 1-310 (437)
22 4fk1_A Putative thioredoxin re 100.0 5E-32 1.7E-36 258.9 17.9 277 16-414 3-298 (304)
23 3ab1_A Ferredoxin--NADP reduct 100.0 5.2E-31 1.8E-35 257.6 25.1 286 18-413 13-325 (360)
24 1mo9_A ORF3; nucleotide bindin 100.0 5.9E-31 2E-35 270.0 25.7 292 16-413 40-377 (523)
25 2bc0_A NADH oxidase; flavoprot 100.0 3E-31 1E-35 270.2 22.6 289 19-413 35-360 (490)
26 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.2E-30 4.3E-35 267.4 27.1 282 17-413 210-513 (521)
27 3kd9_A Coenzyme A disulfide re 100.0 1.9E-31 6.6E-36 268.7 20.5 290 18-413 2-314 (449)
28 3ef6_A Toluene 1,2-dioxygenase 100.0 5.9E-32 2E-36 269.3 16.4 286 20-413 3-308 (410)
29 3fg2_P Putative rubredoxin red 100.0 1.1E-31 3.9E-36 266.7 18.2 288 19-413 1-309 (404)
30 1zmd_A Dihydrolipoyl dehydroge 100.0 1.9E-31 6.6E-36 270.5 19.7 292 18-413 5-344 (474)
31 1ebd_A E3BD, dihydrolipoamide 100.0 8.3E-31 2.8E-35 264.5 23.5 285 19-413 3-332 (455)
32 3fbs_A Oxidoreductase; structu 100.0 1E-30 3.6E-35 247.7 22.2 269 20-413 3-289 (297)
33 2qae_A Lipoamide, dihydrolipoy 100.0 7.6E-31 2.6E-35 265.7 22.6 288 19-413 2-339 (468)
34 1dxl_A Dihydrolipoamide dehydr 100.0 7.9E-31 2.7E-35 265.7 22.5 291 17-413 4-341 (470)
35 3klj_A NAD(FAD)-dependent dehy 100.0 4.6E-32 1.6E-36 267.7 13.0 272 18-413 8-293 (385)
36 3lad_A Dihydrolipoamide dehydr 100.0 6.6E-30 2.3E-34 259.3 28.6 288 18-413 2-342 (476)
37 2a8x_A Dihydrolipoyl dehydroge 100.0 4.3E-31 1.5E-35 267.3 18.8 285 19-413 3-333 (464)
38 4a9w_A Monooxygenase; baeyer-v 100.0 3.1E-30 1E-34 250.5 23.9 310 19-414 3-350 (357)
39 4g6h_A Rotenone-insensitive NA 100.0 2.4E-32 8.1E-37 278.5 9.2 320 16-413 39-398 (502)
40 3urh_A Dihydrolipoyl dehydroge 100.0 2.7E-30 9.3E-35 263.2 24.1 289 17-413 23-362 (491)
41 2cdu_A NADPH oxidase; flavoenz 100.0 1.6E-30 5.5E-35 262.2 21.9 287 20-413 1-316 (452)
42 3iwa_A FAD-dependent pyridine 100.0 1.1E-30 3.6E-35 264.9 20.5 292 19-413 3-328 (472)
43 1nhp_A NADH peroxidase; oxidor 100.0 4E-30 1.4E-34 258.9 24.2 288 20-413 1-315 (447)
44 3l8k_A Dihydrolipoyl dehydroge 100.0 2.1E-30 7.2E-35 262.3 22.0 286 19-413 4-332 (466)
45 2v3a_A Rubredoxin reductase; a 100.0 1.5E-30 5.3E-35 256.8 20.2 291 18-413 3-305 (384)
46 3dk9_A Grase, GR, glutathione 100.0 9.3E-31 3.2E-35 265.8 18.7 289 18-413 19-355 (478)
47 1v59_A Dihydrolipoamide dehydr 100.0 5.1E-30 1.7E-34 260.3 24.0 289 19-413 5-349 (478)
48 3ntd_A FAD-dependent pyridine 100.0 2E-30 6.7E-35 268.7 21.3 307 20-413 2-337 (565)
49 1zk7_A HGII, reductase, mercur 100.0 1.4E-29 4.8E-34 256.3 26.7 282 18-413 3-333 (467)
50 2hqm_A GR, grase, glutathione 100.0 1.9E-30 6.4E-35 263.6 20.3 284 18-413 10-346 (479)
51 2wpf_A Trypanothione reductase 100.0 1.5E-30 5E-35 265.3 19.4 285 18-413 6-354 (495)
52 3cgb_A Pyridine nucleotide-dis 100.0 3.7E-30 1.3E-34 261.5 21.6 290 19-413 36-352 (480)
53 1xdi_A RV3303C-LPDA; reductase 100.0 9.6E-30 3.3E-34 259.7 24.6 281 19-413 2-341 (499)
54 3dgz_A Thioredoxin reductase 2 100.0 6.4E-30 2.2E-34 260.2 23.2 290 18-413 5-351 (488)
55 1ges_A Glutathione reductase; 100.0 1.2E-30 4.1E-35 263.0 17.0 283 18-413 3-327 (450)
56 1onf_A GR, grase, glutathione 100.0 6.4E-30 2.2E-34 261.0 22.3 282 19-413 2-370 (500)
57 1fec_A Trypanothione reductase 100.0 4.6E-30 1.6E-34 261.3 21.0 285 18-413 2-350 (490)
58 3ic9_A Dihydrolipoamide dehydr 100.0 1.6E-30 5.6E-35 264.8 17.6 286 19-413 8-337 (492)
59 2eq6_A Pyruvate dehydrogenase 100.0 3.4E-30 1.2E-34 260.6 19.7 287 19-413 6-333 (464)
60 3ics_A Coenzyme A-disulfide re 100.0 4.5E-30 1.5E-34 267.3 21.1 291 16-413 33-352 (588)
61 1q1r_A Putidaredoxin reductase 100.0 3.4E-30 1.1E-34 258.3 19.1 290 19-413 4-318 (431)
62 1ojt_A Surface protein; redox- 100.0 1.4E-29 4.7E-34 257.4 23.2 284 19-413 6-348 (482)
63 2gqw_A Ferredoxin reductase; f 100.0 1.4E-29 4.8E-34 252.0 21.8 276 18-413 6-307 (408)
64 3dgh_A TRXR-1, thioredoxin red 100.0 2.8E-29 9.6E-34 255.2 24.1 290 17-413 7-351 (483)
65 3qfa_A Thioredoxin reductase 1 100.0 2.5E-29 8.4E-34 257.7 23.8 290 18-413 31-379 (519)
66 2r9z_A Glutathione amide reduc 100.0 2E-29 6.9E-34 254.9 22.4 283 18-413 3-326 (463)
67 4dna_A Probable glutathione re 100.0 6.2E-30 2.1E-34 258.7 18.0 283 18-413 4-330 (463)
68 1xhc_A NADH oxidase /nitrite r 100.0 7E-30 2.4E-34 250.6 17.7 276 18-413 7-296 (367)
69 1lvl_A Dihydrolipoamide dehydr 100.0 2.8E-29 9.4E-34 253.6 22.4 281 18-413 4-329 (458)
70 2yqu_A 2-oxoglutarate dehydrog 100.0 2.3E-29 7.8E-34 254.0 20.7 283 20-413 2-326 (455)
71 3o0h_A Glutathione reductase; 100.0 1.4E-29 4.9E-34 257.4 17.5 281 19-413 26-350 (484)
72 2xve_A Flavin-containing monoo 100.0 2.8E-28 9.5E-33 246.5 26.0 265 20-413 3-338 (464)
73 3d1c_A Flavin-containing putat 100.0 2.1E-28 7.3E-33 239.4 22.7 287 19-413 4-336 (369)
74 3hyw_A Sulfide-quinone reducta 100.0 4.5E-30 1.5E-34 257.3 8.2 300 20-413 3-330 (430)
75 2x8g_A Thioredoxin glutathione 100.0 5.5E-28 1.9E-32 252.0 23.5 293 17-413 105-458 (598)
76 4b1b_A TRXR, thioredoxin reduc 100.0 6.6E-29 2.2E-33 254.3 15.2 284 19-413 42-383 (542)
77 3k30_A Histamine dehydrogenase 100.0 6.2E-28 2.1E-32 255.3 21.0 274 16-414 388-673 (690)
78 1o94_A Tmadh, trimethylamine d 100.0 2.6E-28 9E-33 259.4 18.1 289 16-414 386-698 (729)
79 3sx6_A Sulfide-quinone reducta 100.0 1.8E-28 6E-33 246.2 15.2 299 19-414 4-342 (437)
80 2gag_A Heterotetrameric sarcos 100.0 8E-28 2.7E-32 262.4 20.6 280 19-413 128-441 (965)
81 3vrd_B FCCB subunit, flavocyto 99.9 4.4E-28 1.5E-32 240.4 12.5 293 19-413 2-321 (401)
82 2gv8_A Monooxygenase; FMO, FAD 99.9 4.3E-26 1.5E-30 229.5 26.5 267 18-413 5-359 (447)
83 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.6E-26 5.6E-31 243.8 23.4 282 16-411 370-671 (671)
84 3h8l_A NADH oxidase; membrane 99.9 4.3E-27 1.5E-31 234.0 15.6 282 20-414 2-334 (409)
85 1m6i_A Programmed cell death p 99.9 7.1E-28 2.4E-32 245.3 9.3 296 16-413 8-351 (493)
86 3s5w_A L-ornithine 5-monooxyge 99.9 4.2E-26 1.4E-30 230.4 21.8 331 18-411 29-444 (463)
87 3h28_A Sulfide-quinone reducta 99.9 6.3E-27 2.2E-31 234.4 12.6 291 20-413 3-330 (430)
88 1y56_A Hypothetical protein PH 99.9 2.3E-25 7.7E-30 226.9 16.9 249 19-413 108-374 (493)
89 3gwf_A Cyclohexanone monooxyge 99.9 2.9E-25 1E-29 228.0 17.3 163 18-215 7-213 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 1.8E-23 6.1E-28 215.0 21.9 171 17-215 7-220 (545)
91 4ap3_A Steroid monooxygenase; 99.9 5E-23 1.7E-27 211.8 19.7 164 18-215 20-226 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 5.6E-22 1.9E-26 204.2 22.2 165 17-215 14-221 (542)
93 4b63_A L-ornithine N5 monooxyg 99.8 5.8E-19 2E-23 179.8 26.7 171 17-214 37-282 (501)
94 2ywl_A Thioredoxin reductase r 99.7 3E-16 1E-20 137.5 10.4 166 161-413 3-168 (180)
95 3fpz_A Thiazole biosynthetic e 99.6 3.2E-19 1.1E-23 171.8 -10.5 140 18-180 64-204 (326)
96 2e5v_A L-aspartate oxidase; ar 99.3 6.6E-13 2.3E-17 134.1 6.8 31 21-53 1-31 (472)
97 2cul_A Glucose-inhibited divis 99.1 1.3E-10 4.4E-15 105.9 9.8 35 378-414 196-230 (232)
98 2ywl_A Thioredoxin reductase r 98.9 7.3E-09 2.5E-13 90.1 11.0 96 20-118 2-109 (180)
99 2gqf_A Hypothetical protein HI 98.9 2.1E-09 7.2E-14 106.1 7.4 37 19-57 4-40 (401)
100 3v76_A Flavoprotein; structura 98.9 4.6E-09 1.6E-13 104.1 9.4 106 12-119 20-187 (417)
101 2bry_A NEDD9 interacting prote 98.7 7E-08 2.4E-12 97.8 11.9 101 16-118 89-229 (497)
102 1rp0_A ARA6, thiazole biosynth 98.7 1.6E-07 5.4E-12 88.0 12.7 39 18-58 38-77 (284)
103 2cul_A Glucose-inhibited divis 98.6 2.1E-07 7.2E-12 84.5 12.3 96 18-118 2-124 (232)
104 3alj_A 2-methyl-3-hydroxypyrid 98.6 1.2E-07 4.2E-12 92.4 10.8 100 17-118 9-159 (379)
105 3kkj_A Amine oxidase, flavin-c 98.6 4.1E-08 1.4E-12 89.4 5.7 40 20-61 3-42 (336)
106 1rp0_A ARA6, thiazole biosynth 98.6 4.6E-08 1.6E-12 91.7 6.1 122 280-413 132-272 (284)
107 2i0z_A NAD(FAD)-utilizing dehy 98.5 3.2E-07 1.1E-11 91.6 9.6 38 18-57 25-62 (447)
108 3ces_A MNMG, tRNA uridine 5-ca 98.5 4.7E-07 1.6E-11 93.6 10.8 35 18-54 27-61 (651)
109 1ryi_A Glycine oxidase; flavop 98.5 3.4E-07 1.2E-11 89.0 9.5 41 14-56 12-52 (382)
110 1y0p_A Fumarate reductase flav 98.5 6.5E-07 2.2E-11 92.3 11.5 41 17-59 124-164 (571)
111 3nlc_A Uncharacterized protein 98.5 4.7E-07 1.6E-11 92.4 10.0 35 19-55 107-141 (549)
112 3nix_A Flavoprotein/dehydrogen 98.4 5.2E-07 1.8E-11 88.9 9.7 35 18-54 4-38 (421)
113 3jsk_A Cypbp37 protein; octame 98.4 2.4E-06 8E-11 81.8 12.8 41 18-58 78-118 (344)
114 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 9.4E-07 3.2E-11 84.7 9.6 38 20-59 2-42 (342)
115 3rp8_A Flavoprotein monooxygen 98.4 1.2E-06 4.1E-11 86.1 10.5 39 16-56 20-58 (407)
116 1yvv_A Amine oxidase, flavin-c 98.4 1.6E-06 5.3E-11 82.6 11.0 39 19-59 2-40 (336)
117 3ihg_A RDME; flavoenzyme, anth 98.4 1.9E-06 6.5E-11 88.0 12.0 36 18-55 4-39 (535)
118 3dme_A Conserved exported prot 98.4 1.2E-06 4.1E-11 84.3 9.9 36 18-55 3-38 (369)
119 2x3n_A Probable FAD-dependent 98.3 1.4E-06 5E-11 85.2 10.2 37 18-56 5-41 (399)
120 3fmw_A Oxygenase; mithramycin, 98.3 2E-06 6.9E-11 88.5 11.4 100 18-119 48-207 (570)
121 1y56_B Sarcosine oxidase; dehy 98.3 2.2E-06 7.4E-11 83.3 10.9 35 18-54 4-38 (382)
122 3ps9_A TRNA 5-methylaminomethy 98.3 2.6E-06 9E-11 89.5 12.1 38 18-57 271-308 (676)
123 3cgv_A Geranylgeranyl reductas 98.3 2.4E-06 8.2E-11 83.3 10.9 37 19-57 4-40 (397)
124 3i3l_A Alkylhalidase CMLS; fla 98.3 2.1E-06 7.1E-11 88.7 10.4 37 17-55 21-57 (591)
125 3nyc_A D-arginine dehydrogenas 98.3 9.9E-07 3.4E-11 85.4 7.6 37 18-57 8-44 (381)
126 1qo8_A Flavocytochrome C3 fuma 98.3 2.2E-06 7.4E-11 88.2 10.0 40 17-58 119-158 (566)
127 2uzz_A N-methyl-L-tryptophan o 98.3 1.6E-06 5.4E-11 83.9 8.4 36 19-56 2-37 (372)
128 3c4a_A Probable tryptophan hyd 98.3 1.2E-06 4.1E-11 85.4 7.6 97 20-118 1-142 (381)
129 3pl8_A Pyranose 2-oxidase; sub 98.3 7.1E-07 2.4E-11 92.8 6.1 41 18-60 45-85 (623)
130 2vou_A 2,6-dihydroxypyridine h 98.3 2.6E-06 8.8E-11 83.5 9.8 37 17-55 3-39 (397)
131 2qa1_A PGAE, polyketide oxygen 98.3 3.5E-06 1.2E-10 85.4 11.0 104 14-119 6-165 (500)
132 3oz2_A Digeranylgeranylglycero 98.2 5.3E-07 1.8E-11 87.6 4.4 38 18-57 3-40 (397)
133 3pvc_A TRNA 5-methylaminomethy 98.2 5.9E-06 2E-10 87.0 12.4 38 18-57 263-300 (689)
134 3e1t_A Halogenase; flavoprotei 98.2 2.5E-06 8.5E-11 86.7 9.2 35 18-54 6-40 (512)
135 1k0i_A P-hydroxybenzoate hydro 98.2 2.9E-06 1E-10 82.8 9.4 34 20-55 3-36 (394)
136 2xdo_A TETX2 protein; tetracyc 98.2 4.6E-06 1.6E-10 81.7 10.7 37 17-55 24-60 (398)
137 2qa2_A CABE, polyketide oxygen 98.2 6.6E-06 2.3E-10 83.3 12.1 102 16-119 9-166 (499)
138 2gjc_A Thiazole biosynthetic e 98.2 6.6E-06 2.3E-10 78.2 11.1 41 19-59 65-105 (326)
139 2zxi_A TRNA uridine 5-carboxym 98.2 4.2E-06 1.4E-10 86.2 9.4 35 18-54 26-60 (637)
140 3c4n_A Uncharacterized protein 98.2 3.3E-06 1.1E-10 83.1 8.3 35 19-55 36-72 (405)
141 1nhp_A NADH peroxidase; oxidor 98.2 8.8E-06 3E-10 81.1 11.5 93 18-122 148-248 (447)
142 2gmh_A Electron transfer flavo 98.2 7.1E-06 2.4E-10 84.7 11.1 38 19-58 35-78 (584)
143 4dgk_A Phytoene dehydrogenase; 98.2 1E-06 3.4E-11 89.1 4.6 41 19-61 1-41 (501)
144 4gde_A UDP-galactopyranose mut 98.1 1.3E-06 4.4E-11 88.3 4.7 42 18-61 9-51 (513)
145 2gag_B Heterotetrameric sarcos 98.1 1.1E-05 3.9E-10 78.7 11.3 39 16-55 18-57 (405)
146 1d4d_A Flavocytochrome C fumar 98.1 9.4E-06 3.2E-10 83.6 10.9 40 18-59 125-164 (572)
147 3atr_A Conserved archaeal prot 98.1 8E-06 2.7E-10 81.5 10.0 35 19-55 6-40 (453)
148 1xhc_A NADH oxidase /nitrite r 98.1 8.9E-06 3.1E-10 78.9 9.5 86 19-117 143-232 (367)
149 2yqu_A 2-oxoglutarate dehydrog 98.1 1.3E-05 4.6E-10 79.9 10.6 92 18-122 166-266 (455)
150 2v3a_A Rubredoxin reductase; a 98.0 2.2E-05 7.5E-10 76.5 11.3 89 18-117 144-241 (384)
151 2e1m_A L-glutamate oxidase; L- 98.0 5.4E-06 1.9E-10 80.6 6.7 45 15-61 40-85 (376)
152 2eq6_A Pyruvate dehydrogenase 98.0 2.1E-05 7.2E-10 78.8 11.3 92 18-122 168-273 (464)
153 3cp8_A TRNA uridine 5-carboxym 98.0 1.5E-05 5.1E-10 82.3 10.1 36 17-54 19-54 (641)
154 3nrn_A Uncharacterized protein 98.0 5.1E-06 1.8E-10 81.9 5.9 40 20-61 1-40 (421)
155 1lvl_A Dihydrolipoamide dehydr 98.0 2.4E-05 8.1E-10 78.3 10.4 92 18-122 170-270 (458)
156 2gqw_A Ferredoxin reductase; f 98.0 3.9E-05 1.3E-09 75.5 11.8 89 18-117 144-237 (408)
157 3ka7_A Oxidoreductase; structu 98.0 5.7E-06 2E-10 81.5 5.8 40 20-61 1-40 (425)
158 2jae_A L-amino acid oxidase; o 98.0 8.2E-06 2.8E-10 82.1 6.7 43 16-60 8-50 (489)
159 2bc0_A NADH oxidase; flavoprot 98.0 3.8E-05 1.3E-09 77.4 11.5 90 17-117 192-289 (490)
160 3i6d_A Protoporphyrinogen oxid 97.9 5.2E-06 1.8E-10 82.8 4.8 43 19-61 5-51 (470)
161 4hb9_A Similarities with proba 97.9 7.5E-06 2.5E-10 79.9 5.8 36 19-56 1-36 (412)
162 2bcg_G Secretory pathway GDP d 97.9 7.7E-06 2.6E-10 81.7 6.0 43 17-61 9-51 (453)
163 1ebd_A E3BD, dihydrolipoamide 97.9 4.4E-05 1.5E-09 76.1 11.6 92 18-122 169-272 (455)
164 3nks_A Protoporphyrinogen oxid 97.9 7.2E-06 2.4E-10 82.1 5.7 41 19-61 2-44 (477)
165 4eqs_A Coenzyme A disulfide re 97.9 2.2E-05 7.5E-10 78.1 9.2 88 18-117 146-238 (437)
166 3cgb_A Pyridine nucleotide-dis 97.9 2.5E-05 8.5E-10 78.6 9.7 88 18-117 185-280 (480)
167 3k7m_X 6-hydroxy-L-nicotine ox 97.9 6.5E-06 2.2E-10 81.3 5.1 39 20-60 2-40 (431)
168 1pj5_A N,N-dimethylglycine oxi 97.9 3.7E-05 1.3E-09 82.7 11.4 36 18-55 3-39 (830)
169 4b1b_A TRXR, thioredoxin reduc 97.9 3.3E-05 1.1E-09 78.7 10.4 94 15-122 219-321 (542)
170 3klj_A NAD(FAD)-dependent dehy 97.9 1.9E-05 6.6E-10 77.1 8.2 84 19-117 146-229 (385)
171 2ivd_A PPO, PPOX, protoporphyr 97.9 7.2E-06 2.5E-10 82.2 5.3 44 16-61 13-56 (478)
172 2r9z_A Glutathione amide reduc 97.9 4.5E-05 1.5E-09 76.4 10.8 92 18-122 165-266 (463)
173 1s3e_A Amine oxidase [flavin-c 97.9 8.7E-06 3E-10 82.7 5.5 42 18-61 3-44 (520)
174 2b9w_A Putative aminooxidase; 97.9 1.3E-05 4.6E-10 78.9 6.5 44 17-61 4-47 (424)
175 1ojt_A Surface protein; redox- 97.9 4.4E-05 1.5E-09 76.8 10.2 88 18-117 184-284 (482)
176 3lov_A Protoporphyrinogen oxid 97.9 1.3E-05 4.6E-10 80.2 6.3 43 18-60 3-45 (475)
177 1v0j_A UDP-galactopyranose mut 97.9 1.2E-05 4.3E-10 78.8 5.9 42 18-61 6-48 (399)
178 1v59_A Dihydrolipoamide dehydr 97.9 5.9E-05 2E-09 75.7 11.0 92 18-122 182-289 (478)
179 3oc4_A Oxidoreductase, pyridin 97.9 0.00011 3.7E-09 73.2 12.8 93 18-122 146-246 (452)
180 2yg5_A Putrescine oxidase; oxi 97.8 8.3E-06 2.8E-10 81.1 4.4 41 18-60 4-44 (453)
181 3lxd_A FAD-dependent pyridine 97.8 8.6E-05 3E-09 73.0 11.6 88 19-117 152-249 (415)
182 1zk7_A HGII, reductase, mercur 97.8 7E-05 2.4E-09 75.0 11.1 87 18-117 175-269 (467)
183 3ef6_A Toluene 1,2-dioxygenase 97.8 4.4E-05 1.5E-09 75.1 9.2 90 17-117 141-239 (410)
184 3hdq_A UDP-galactopyranose mut 97.8 1.6E-05 5.5E-10 77.8 5.9 43 17-61 27-69 (397)
185 1ges_A Glutathione reductase; 97.8 6.8E-05 2.3E-09 74.7 10.4 92 18-122 166-267 (450)
186 3fg2_P Putative rubredoxin red 97.8 9E-05 3.1E-09 72.7 10.9 89 18-117 141-239 (404)
187 1zmd_A Dihydrolipoyl dehydroge 97.8 0.0001 3.6E-09 73.8 11.3 89 18-117 177-280 (474)
188 1sez_A Protoporphyrinogen oxid 97.8 2E-05 6.7E-10 79.6 5.9 41 18-60 12-52 (504)
189 2vvm_A Monoamine oxidase N; FA 97.8 1.6E-05 5.5E-10 80.1 5.2 39 20-60 40-78 (495)
190 2hqm_A GR, grase, glutathione 97.8 8.7E-05 3E-09 74.6 10.6 92 18-122 184-287 (479)
191 2iid_A L-amino-acid oxidase; f 97.8 2.3E-05 7.8E-10 79.0 6.3 43 16-60 30-72 (498)
192 3urh_A Dihydrolipoyl dehydroge 97.8 0.00012 4.1E-09 73.7 11.6 93 17-122 196-302 (491)
193 1mo9_A ORF3; nucleotide bindin 97.8 0.00011 3.7E-09 74.7 11.2 86 20-117 215-314 (523)
194 3dje_A Fructosyl amine: oxygen 97.8 2.5E-05 8.4E-10 77.4 6.1 40 18-59 5-45 (438)
195 1rsg_A FMS1 protein; FAD bindi 97.7 1.6E-05 5.6E-10 80.6 4.6 42 18-60 7-48 (516)
196 2bi7_A UDP-galactopyranose mut 97.7 2.8E-05 9.6E-10 75.9 6.0 41 19-61 3-43 (384)
197 1onf_A GR, grase, glutathione 97.7 0.00014 4.9E-09 73.4 11.4 91 19-122 176-277 (500)
198 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00013 4.4E-09 73.0 10.8 92 18-122 170-273 (464)
199 2qae_A Lipoamide, dihydrolipoy 97.7 0.00015 5.1E-09 72.5 11.2 88 18-117 173-274 (468)
200 2cdu_A NADPH oxidase; flavoenz 97.7 0.00012 4.1E-09 72.9 10.3 89 18-117 148-245 (452)
201 2wpf_A Trypanothione reductase 97.7 0.00015 5E-09 73.2 11.0 88 18-117 190-290 (495)
202 1i8t_A UDP-galactopyranose mut 97.7 2.6E-05 8.7E-10 75.7 5.2 39 20-60 2-40 (367)
203 1fec_A Trypanothione reductase 97.7 0.00014 4.7E-09 73.3 10.7 88 18-117 186-286 (490)
204 1dxl_A Dihydrolipoamide dehydr 97.7 9.4E-05 3.2E-09 74.0 9.3 88 18-117 176-277 (470)
205 3c96_A Flavin-containing monoo 97.7 3.3E-05 1.1E-09 75.9 5.8 37 18-56 3-40 (410)
206 1q1r_A Putidaredoxin reductase 97.7 0.0002 6.8E-09 70.9 11.4 89 18-117 148-248 (431)
207 3ic9_A Dihydrolipoamide dehydr 97.7 0.0002 6.9E-09 72.1 11.6 92 17-122 172-276 (492)
208 3lad_A Dihydrolipoamide dehydr 97.7 0.00024 8.2E-09 71.2 12.0 89 17-117 178-278 (476)
209 2oln_A NIKD protein; flavoprot 97.7 3.1E-05 1E-09 75.6 5.1 37 19-57 4-40 (397)
210 3ics_A Coenzyme A-disulfide re 97.7 0.00018 6.3E-09 74.1 11.1 88 18-117 186-280 (588)
211 3dk9_A Grase, GR, glutathione 97.6 0.0003 1E-08 70.5 12.1 89 17-117 185-291 (478)
212 1trb_A Thioredoxin reductase; 97.6 0.00029 9.9E-09 66.2 11.2 86 18-117 144-245 (320)
213 3ihm_A Styrene monooxygenase A 97.6 3.4E-05 1.2E-09 76.4 4.9 34 19-54 22-55 (430)
214 1xdi_A RV3303C-LPDA; reductase 97.6 0.00024 8.2E-09 71.7 10.9 88 18-117 181-277 (499)
215 2z3y_A Lysine-specific histone 97.6 5.8E-05 2E-09 79.0 6.5 42 17-60 105-146 (662)
216 1c0p_A D-amino acid oxidase; a 97.6 7E-05 2.4E-09 72.1 6.6 36 18-55 5-40 (363)
217 3d1c_A Flavin-containing putat 97.6 0.00026 8.9E-09 68.0 10.7 95 18-117 165-270 (369)
218 4at0_A 3-ketosteroid-delta4-5a 97.6 4.8E-05 1.6E-09 77.1 5.7 40 18-59 40-79 (510)
219 3kd9_A Coenzyme A disulfide re 97.6 0.00032 1.1E-08 69.7 11.5 88 18-117 147-242 (449)
220 4dna_A Probable glutathione re 97.6 0.00027 9.1E-09 70.6 10.8 89 17-117 168-266 (463)
221 3iwa_A FAD-dependent pyridine 97.6 0.00033 1.1E-08 70.1 11.5 89 18-117 158-256 (472)
222 3g3e_A D-amino-acid oxidase; F 97.6 4E-05 1.4E-09 73.5 4.5 36 20-55 1-40 (351)
223 2gf3_A MSOX, monomeric sarcosi 97.6 5.4E-05 1.9E-09 73.4 5.4 37 19-57 3-39 (389)
224 2xag_A Lysine-specific histone 97.6 7.5E-05 2.6E-09 80.0 6.8 42 17-60 276-317 (852)
225 4dsg_A UDP-galactopyranose mut 97.6 6.3E-05 2.2E-09 75.7 5.9 44 18-62 8-51 (484)
226 3o0h_A Glutathione reductase; 97.6 0.00037 1.3E-08 70.0 11.4 89 17-117 189-286 (484)
227 1m6i_A Programmed cell death p 97.5 0.00031 1.1E-08 70.8 10.7 89 18-117 179-280 (493)
228 1d5t_A Guanine nucleotide diss 97.5 7.7E-05 2.6E-09 74.0 5.9 41 18-60 5-45 (433)
229 2zbw_A Thioredoxin reductase; 97.5 0.00043 1.5E-08 65.6 10.9 86 18-117 151-250 (335)
230 2bry_A NEDD9 interacting prote 97.5 1.6E-05 5.4E-10 80.5 0.7 86 107-215 37-127 (497)
231 3ntd_A FAD-dependent pyridine 97.5 0.00039 1.3E-08 71.1 11.2 88 18-117 150-265 (565)
232 3dgh_A TRXR-1, thioredoxin red 97.5 0.00058 2E-08 68.5 11.7 87 18-117 186-287 (483)
233 2r0c_A REBC; flavin adenine di 97.5 7.5E-05 2.6E-09 76.4 5.1 36 19-56 26-61 (549)
234 2aqj_A Tryptophan halogenase, 97.5 0.00012 4E-09 74.8 6.5 36 18-55 4-42 (538)
235 3itj_A Thioredoxin reductase 1 97.5 0.00045 1.6E-08 65.2 10.2 82 18-117 172-269 (338)
236 3qfa_A Thioredoxin reductase 1 97.5 0.00063 2.2E-08 69.0 11.8 87 18-117 209-313 (519)
237 3dgz_A Thioredoxin reductase 2 97.5 0.00067 2.3E-08 68.2 11.8 87 18-117 184-285 (488)
238 2e4g_A Tryptophan halogenase; 97.5 0.00013 4.3E-09 74.7 6.4 36 18-55 24-62 (550)
239 1b37_A Protein (polyamine oxid 97.5 9.9E-05 3.4E-09 73.9 5.5 42 18-61 3-45 (472)
240 3da1_A Glycerol-3-phosphate de 97.4 0.00013 4.5E-09 74.8 5.8 42 17-60 16-57 (561)
241 2qcu_A Aerobic glycerol-3-phos 97.4 0.00014 4.8E-09 73.5 5.8 38 18-57 2-39 (501)
242 2pyx_A Tryptophan halogenase; 97.4 0.00013 4.5E-09 74.1 5.6 36 18-55 6-53 (526)
243 3p1w_A Rabgdi protein; GDI RAB 97.4 0.00013 4.4E-09 72.9 5.3 44 15-60 16-59 (475)
244 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00011 3.9E-09 76.5 5.0 36 18-55 31-67 (639)
245 3e1t_A Halogenase; flavoprotei 97.4 0.00026 8.8E-09 71.7 7.5 50 280-346 123-172 (512)
246 4gut_A Lysine-specific histone 97.4 0.00014 4.8E-09 77.3 5.6 40 17-58 334-373 (776)
247 3g5s_A Methylenetetrahydrofola 97.3 0.0002 6.7E-09 69.4 5.8 34 20-55 2-35 (443)
248 2weu_A Tryptophan 5-halogenase 97.3 0.00012 4.2E-09 74.0 4.5 34 20-55 3-39 (511)
249 3cgv_A Geranylgeranyl reductas 97.3 0.00089 3E-08 64.8 10.2 138 160-346 5-162 (397)
250 3ab1_A Ferredoxin--NADP reduct 97.3 0.00086 2.9E-08 64.3 9.8 86 18-117 162-261 (360)
251 3s5w_A L-ornithine 5-monooxyge 97.3 0.00058 2E-08 67.9 8.8 39 18-56 226-264 (463)
252 2q7v_A Thioredoxin reductase; 97.2 0.0018 6.2E-08 61.0 11.3 83 18-117 151-247 (325)
253 2wdq_A Succinate dehydrogenase 97.2 0.00017 5.9E-09 74.3 4.5 36 19-56 7-42 (588)
254 1chu_A Protein (L-aspartate ox 97.2 0.00021 7.1E-09 72.9 4.9 38 18-58 7-44 (540)
255 1fl2_A Alkyl hydroperoxide red 97.2 0.0017 5.8E-08 60.6 10.9 82 18-117 143-240 (310)
256 1vdc_A NTR, NADPH dependent th 97.2 0.0019 6.4E-08 61.0 11.1 83 18-117 158-257 (333)
257 3r9u_A Thioredoxin reductase; 97.2 0.0019 6.5E-08 60.1 11.0 83 18-117 146-242 (315)
258 4g6h_A Rotenone-insensitive NA 97.2 0.0014 4.7E-08 66.2 10.6 88 20-117 218-330 (502)
259 2rgh_A Alpha-glycerophosphate 97.2 0.00031 1.1E-08 72.2 5.9 39 18-58 31-69 (571)
260 1kf6_A Fumarate reductase flav 97.2 0.00023 7.8E-09 73.6 4.9 37 19-55 5-41 (602)
261 3axb_A Putative oxidoreductase 97.2 0.0002 7E-09 71.0 4.4 37 18-55 22-58 (448)
262 2q0l_A TRXR, thioredoxin reduc 97.2 0.0023 7.8E-08 59.7 11.5 83 18-117 142-239 (311)
263 2h88_A Succinate dehydrogenase 97.2 0.00021 7.2E-09 74.1 4.5 36 18-55 17-52 (621)
264 1pn0_A Phenol 2-monooxygenase; 97.2 0.00026 8.8E-09 74.1 5.0 35 19-55 8-47 (665)
265 2a87_A TRXR, TR, thioredoxin r 97.2 0.0014 4.9E-08 62.0 9.8 83 18-117 154-250 (335)
266 2x8g_A Thioredoxin glutathione 97.1 0.0022 7.6E-08 66.1 11.5 87 18-117 285-393 (598)
267 2bs2_A Quinol-fumarate reducta 97.1 0.00028 9.7E-09 73.6 4.6 36 19-56 5-40 (660)
268 3f8d_A Thioredoxin reductase ( 97.1 0.0026 9E-08 59.4 10.9 83 18-117 153-249 (323)
269 3l8k_A Dihydrolipoyl dehydroge 97.1 0.0021 7.1E-08 64.1 10.7 86 18-117 171-270 (466)
270 3cty_A Thioredoxin reductase; 97.1 0.002 6.9E-08 60.5 10.0 82 18-117 154-250 (319)
271 2gv8_A Monooxygenase; FMO, FAD 97.0 0.0018 6.3E-08 64.1 9.5 37 18-56 211-248 (447)
272 3vrd_B FCCB subunit, flavocyto 97.0 0.0011 3.8E-08 64.5 7.8 38 159-215 2-39 (401)
273 3gyx_A Adenylylsulfate reducta 97.0 0.0005 1.7E-08 71.7 5.4 35 19-55 22-62 (662)
274 3i3l_A Alkylhalidase CMLS; fla 97.0 0.0013 4.4E-08 67.8 8.3 49 280-346 140-188 (591)
275 3k30_A Histamine dehydrogenase 97.0 0.0021 7.1E-08 67.6 9.9 90 17-117 521-622 (690)
276 1jnr_A Adenylylsulfate reducta 97.0 0.00056 1.9E-08 71.2 5.4 36 18-55 21-60 (643)
277 3lzw_A Ferredoxin--NADP reduct 97.0 0.0024 8.2E-08 60.0 9.2 82 18-117 153-248 (332)
278 3nlc_A Uncharacterized protein 97.0 0.0021 7.3E-08 65.4 9.3 47 280-347 232-278 (549)
279 2xve_A Flavin-containing monoo 96.9 0.0026 9E-08 63.4 9.6 37 18-56 196-232 (464)
280 3oz2_A Digeranylgeranylglycero 96.9 0.0022 7.6E-08 61.7 8.7 137 161-346 6-162 (397)
281 3fbs_A Oxidoreductase; structu 96.9 0.0018 6.1E-08 59.8 7.3 79 18-117 140-224 (297)
282 3hyw_A Sulfide-quinone reducta 96.9 0.002 7E-08 63.5 8.0 36 160-214 3-38 (430)
283 4a5l_A Thioredoxin reductase; 96.8 0.0035 1.2E-07 58.4 9.2 36 18-55 151-186 (314)
284 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00061 2.1E-08 71.3 4.0 39 18-56 55-100 (721)
285 3gwf_A Cyclohexanone monooxyge 96.8 0.0049 1.7E-07 62.7 10.5 37 17-55 176-212 (540)
286 3v76_A Flavoprotein; structura 96.8 0.0036 1.2E-07 61.6 8.9 36 158-214 26-61 (417)
287 3h8l_A NADH oxidase; membrane 96.8 0.002 6.8E-08 63.0 7.1 37 160-214 2-38 (409)
288 1kdg_A CDH, cellobiose dehydro 96.7 0.0011 3.8E-08 67.6 5.1 37 17-55 5-41 (546)
289 1hyu_A AHPF, alkyl hydroperoxi 96.7 0.0071 2.4E-07 61.2 10.9 82 18-117 354-451 (521)
290 3nix_A Flavoprotein/dehydrogen 96.7 0.0091 3.1E-07 58.2 11.3 33 160-213 6-38 (421)
291 3atr_A Conserved archaeal prot 96.7 0.003 1E-07 62.6 7.5 140 160-346 7-162 (453)
292 1y0p_A Fumarate reductase flav 96.7 0.0091 3.1E-07 61.1 11.2 50 280-346 267-317 (571)
293 2vdc_G Glutamate synthase [NAD 96.6 0.0083 2.8E-07 59.7 10.4 38 17-56 262-300 (456)
294 3jsk_A Cypbp37 protein; octame 96.6 0.0081 2.8E-07 57.2 9.4 37 159-214 79-115 (344)
295 4ap3_A Steroid monooxygenase; 96.5 0.011 3.6E-07 60.4 10.7 36 18-55 190-225 (549)
296 1ju2_A HydroxynitrIle lyase; f 96.5 0.0011 3.9E-08 67.4 3.1 36 18-56 25-60 (536)
297 3uox_A Otemo; baeyer-villiger 96.4 0.0037 1.3E-07 63.7 6.6 37 17-55 183-219 (545)
298 1d4d_A Flavocytochrome C fumar 96.4 0.018 6.2E-07 58.9 11.7 50 280-346 267-317 (572)
299 2x5o_A UDP-N-acetylmuramoylala 96.4 0.003 1E-07 62.6 5.5 78 18-125 4-81 (439)
300 1qo8_A Flavocytochrome C3 fuma 96.4 0.0089 3E-07 61.2 9.1 50 280-346 262-312 (566)
301 1k0i_A P-hydroxybenzoate hydro 96.4 0.0092 3.1E-07 57.7 8.7 34 160-214 3-36 (394)
302 2i0z_A NAD(FAD)-utilizing dehy 96.4 0.0099 3.4E-07 58.8 9.1 33 160-213 27-59 (447)
303 2gjc_A Thiazole biosynthetic e 96.3 0.0047 1.6E-07 58.5 6.2 36 160-214 66-101 (326)
304 1o94_A Tmadh, trimethylamine d 96.3 0.0088 3E-07 63.2 8.8 67 17-95 526-594 (729)
305 3t37_A Probable dehydrogenase; 96.3 0.0024 8.2E-08 64.6 4.3 37 18-55 16-52 (526)
306 3lk7_A UDP-N-acetylmuramoylala 96.3 0.0071 2.4E-07 60.1 7.6 74 18-117 8-82 (451)
307 2x3n_A Probable FAD-dependent 96.2 0.019 6.4E-07 55.7 10.0 34 160-214 7-40 (399)
308 1n4w_A CHOD, cholesterol oxida 96.2 0.0037 1.3E-07 63.1 5.0 38 18-57 4-41 (504)
309 3q9t_A Choline dehydrogenase a 96.2 0.0033 1.1E-07 64.4 4.7 38 17-55 4-41 (577)
310 1ps9_A 2,4-dienoyl-COA reducta 96.2 0.015 5.2E-07 60.7 9.8 92 17-117 492-626 (671)
311 2qa1_A PGAE, polyketide oxygen 96.2 0.02 7E-07 57.5 10.3 36 158-214 10-45 (500)
312 3dme_A Conserved exported prot 96.1 0.026 8.8E-07 53.5 10.1 34 159-213 4-37 (369)
313 3alj_A 2-methyl-3-hydroxypyrid 96.1 0.016 5.5E-07 55.8 8.6 37 158-215 10-46 (379)
314 4gcm_A TRXR, thioredoxin reduc 96.1 0.006 2.1E-07 57.0 5.4 37 18-56 144-180 (312)
315 2gag_A Heterotetrameric sarcos 96.1 0.0068 2.3E-07 66.1 6.5 78 19-117 284-381 (965)
316 3sx6_A Sulfide-quinone reducta 96.0 0.015 5E-07 57.4 8.3 91 20-117 150-267 (437)
317 3ihg_A RDME; flavoenzyme, anth 96.0 0.018 6.2E-07 58.3 9.1 35 159-214 5-39 (535)
318 1coy_A Cholesterol oxidase; ox 96.0 0.0054 1.8E-07 61.9 5.1 37 17-55 9-45 (507)
319 4a9w_A Monooxygenase; baeyer-v 96.0 0.0099 3.4E-07 56.2 6.7 34 18-54 162-195 (357)
320 2gqf_A Hypothetical protein HI 96.0 0.021 7.3E-07 55.7 9.1 34 160-214 5-38 (401)
321 4fk1_A Putative thioredoxin re 96.0 0.024 8.1E-07 52.8 9.1 35 158-213 5-39 (304)
322 2vou_A 2,6-dihydroxypyridine h 95.9 0.011 3.9E-07 57.3 6.9 36 158-214 4-39 (397)
323 2qa2_A CABE, polyketide oxygen 95.9 0.04 1.4E-06 55.3 11.1 36 158-214 11-46 (499)
324 3qvp_A Glucose oxidase; oxidor 95.9 0.005 1.7E-07 63.1 4.3 37 17-54 17-53 (583)
325 3fwz_A Inner membrane protein 95.8 0.013 4.4E-07 48.1 5.9 37 15-53 3-39 (140)
326 1gte_A Dihydropyrimidine dehyd 95.8 0.029 9.8E-07 61.6 10.2 34 19-54 332-366 (1025)
327 3h28_A Sulfide-quinone reducta 95.8 0.02 6.7E-07 56.3 8.0 91 20-117 143-254 (430)
328 1lss_A TRK system potassium up 95.8 0.012 4.1E-07 47.6 5.4 34 18-53 3-36 (140)
329 4at0_A 3-ketosteroid-delta4-5a 95.7 0.036 1.2E-06 55.8 9.9 50 280-346 214-264 (510)
330 2g1u_A Hypothetical protein TM 95.7 0.015 5.1E-07 48.5 5.8 36 17-54 17-52 (155)
331 3fmw_A Oxygenase; mithramycin, 95.7 0.038 1.3E-06 56.5 9.9 34 160-214 50-83 (570)
332 3eag_A UDP-N-acetylmuramate:L- 95.7 0.037 1.3E-06 52.3 9.1 72 18-117 3-76 (326)
333 2gmh_A Electron transfer flavo 95.6 0.033 1.1E-06 57.2 9.2 62 280-346 156-217 (584)
334 2jbv_A Choline oxidase; alcoho 95.6 0.0086 2.9E-07 61.0 4.9 37 18-56 12-49 (546)
335 1yvv_A Amine oxidase, flavin-c 95.6 0.038 1.3E-06 51.8 8.8 33 160-213 3-35 (336)
336 1gpe_A Protein (glucose oxidas 95.6 0.0088 3E-07 61.5 4.6 36 18-55 23-59 (587)
337 1y56_B Sarcosine oxidase; dehy 95.5 0.035 1.2E-06 53.2 8.5 34 159-213 5-38 (382)
338 1ryi_A Glycine oxidase; flavop 95.5 0.04 1.4E-06 52.7 8.7 22 159-180 17-38 (382)
339 3fim_B ARYL-alcohol oxidase; A 95.4 0.006 2.1E-07 62.4 2.8 37 19-56 2-38 (566)
340 1cjc_A Protein (adrenodoxin re 95.4 0.065 2.2E-06 53.2 10.2 36 18-55 144-200 (460)
341 3c96_A Flavin-containing monoo 95.3 0.089 3E-06 51.1 10.8 36 159-214 4-39 (410)
342 1id1_A Putative potassium chan 95.3 0.021 7E-07 47.5 5.4 34 18-53 2-35 (153)
343 3llv_A Exopolyphosphatase-rela 95.3 0.021 7.1E-07 46.6 5.1 34 18-53 5-38 (141)
344 3ces_A MNMG, tRNA uridine 5-ca 95.3 0.027 9.3E-07 58.2 7.0 33 159-212 28-60 (651)
345 1y56_A Hypothetical protein PH 95.2 0.037 1.3E-06 55.5 7.8 34 159-214 108-141 (493)
346 2zxi_A TRNA uridine 5-carboxym 95.2 0.094 3.2E-06 54.0 10.7 33 159-212 27-59 (637)
347 1lqt_A FPRA; NADP+ derivative, 95.2 0.099 3.4E-06 51.8 10.7 37 18-55 146-202 (456)
348 3doj_A AT3G25530, dehydrogenas 95.1 0.026 9E-07 52.9 5.9 52 1-54 1-54 (310)
349 1w4x_A Phenylacetone monooxyge 95.0 0.078 2.7E-06 53.8 9.4 35 159-214 16-50 (542)
350 3da1_A Glycerol-3-phosphate de 94.9 0.11 3.7E-06 53.0 10.3 51 280-346 182-232 (561)
351 4g65_A TRK system potassium up 94.9 0.019 6.4E-07 57.1 4.5 35 18-54 2-36 (461)
352 2xdo_A TETX2 protein; tetracyc 94.9 0.1 3.4E-06 50.5 9.6 36 158-214 25-60 (398)
353 3rp8_A Flavoprotein monooxygen 94.9 0.1 3.4E-06 50.6 9.5 36 158-214 22-57 (407)
354 1vg0_A RAB proteins geranylger 94.7 0.033 1.1E-06 57.5 5.8 43 17-61 6-48 (650)
355 3dfz_A SIRC, precorrin-2 dehyd 94.7 0.034 1.2E-06 49.5 5.1 73 17-117 29-101 (223)
356 2gag_B Heterotetrameric sarcos 94.6 0.055 1.9E-06 52.1 6.9 36 159-213 21-56 (405)
357 3ic5_A Putative saccharopine d 94.5 0.049 1.7E-06 42.4 5.3 35 18-53 4-38 (118)
358 2r0c_A REBC; flavin adenine di 94.5 0.064 2.2E-06 54.5 7.5 34 160-214 27-60 (549)
359 3c85_A Putative glutathione-re 94.5 0.047 1.6E-06 46.7 5.5 34 18-53 38-72 (183)
360 2hmt_A YUAA protein; RCK, KTN, 94.5 0.036 1.2E-06 44.9 4.6 33 19-53 6-38 (144)
361 1pj5_A N,N-dimethylglycine oxi 94.4 0.12 3.9E-06 55.4 9.4 22 159-180 4-25 (830)
362 3cp8_A TRNA uridine 5-carboxym 94.4 0.058 2E-06 55.6 6.7 35 158-213 20-54 (641)
363 3ps9_A TRNA 5-methylaminomethy 94.2 0.17 5.9E-06 52.7 10.1 33 159-212 272-304 (676)
364 1kyq_A Met8P, siroheme biosynt 94.0 0.039 1.3E-06 50.8 4.0 35 18-54 12-46 (274)
365 3l4b_C TRKA K+ channel protien 93.9 0.047 1.6E-06 48.2 4.4 32 20-53 1-32 (218)
366 3qj4_A Renalase; FAD/NAD(P)-bi 93.5 0.13 4.6E-06 48.4 7.1 21 160-180 2-22 (342)
367 1kf6_A Fumarate reductase flav 93.5 0.25 8.5E-06 50.8 9.6 50 280-345 146-196 (602)
368 2aqj_A Tryptophan halogenase, 93.5 0.41 1.4E-05 48.2 11.1 37 159-213 5-41 (538)
369 3dtt_A NADP oxidoreductase; st 93.5 0.089 3.1E-06 47.4 5.5 41 13-55 13-53 (245)
370 4dio_A NAD(P) transhydrogenase 93.5 0.094 3.2E-06 50.9 5.9 36 18-55 189-224 (405)
371 1lld_A L-lactate dehydrogenase 93.4 0.084 2.9E-06 49.5 5.5 34 18-53 6-41 (319)
372 2e4g_A Tryptophan halogenase; 93.4 0.37 1.3E-05 48.8 10.7 38 158-213 24-61 (550)
373 1pzg_A LDH, lactate dehydrogen 93.1 0.13 4.4E-06 48.7 6.2 35 18-54 8-43 (331)
374 3g79_A NDP-N-acetyl-D-galactos 93.1 0.065 2.2E-06 53.4 4.2 51 2-55 2-54 (478)
375 2wdq_A Succinate dehydrogenase 93.0 0.51 1.7E-05 48.3 11.0 51 280-345 155-205 (588)
376 3p2y_A Alanine dehydrogenase/p 93.0 0.11 3.7E-06 50.1 5.4 35 18-54 183-217 (381)
377 2h88_A Succinate dehydrogenase 93.0 0.4 1.4E-05 49.4 10.1 51 280-346 167-217 (621)
378 1f0y_A HCDH, L-3-hydroxyacyl-C 92.8 0.14 4.9E-06 47.6 6.0 35 18-54 14-48 (302)
379 4hv4_A UDP-N-acetylmuramate--L 92.8 0.25 8.7E-06 49.4 8.1 71 17-117 20-91 (494)
380 2e5v_A L-aspartate oxidase; ar 92.7 0.28 9.6E-06 48.7 8.3 46 366-413 317-370 (472)
381 1ks9_A KPA reductase;, 2-dehyd 92.7 0.14 4.7E-06 47.0 5.6 34 20-55 1-34 (291)
382 2ew2_A 2-dehydropantoate 2-red 92.7 0.12 4.3E-06 47.9 5.4 33 19-53 3-35 (316)
383 2bs2_A Quinol-fumarate reducta 92.6 0.37 1.3E-05 50.0 9.4 50 280-345 170-219 (660)
384 2raf_A Putative dinucleotide-b 92.6 0.15 5.3E-06 44.6 5.6 37 17-55 17-53 (209)
385 3kkj_A Amine oxidase, flavin-c 92.6 0.087 3E-06 46.6 4.1 37 376-414 290-326 (336)
386 3i83_A 2-dehydropantoate 2-red 92.6 0.13 4.4E-06 48.3 5.4 32 20-53 3-34 (320)
387 4e12_A Diketoreductase; oxidor 92.4 0.16 5.5E-06 46.8 5.7 34 19-54 4-37 (283)
388 2y0c_A BCEC, UDP-glucose dehyd 92.2 0.15 5.2E-06 50.8 5.5 35 18-54 7-41 (478)
389 3oj0_A Glutr, glutamyl-tRNA re 92.1 0.074 2.5E-06 43.5 2.7 33 19-53 21-53 (144)
390 2pyx_A Tryptophan halogenase; 92.1 0.21 7.2E-06 50.3 6.6 23 158-180 6-28 (526)
391 1l7d_A Nicotinamide nucleotide 92.1 0.18 6.3E-06 48.7 5.9 36 18-55 171-206 (384)
392 1x13_A NAD(P) transhydrogenase 92.1 0.17 5.9E-06 49.2 5.7 35 18-54 171-205 (401)
393 4huj_A Uncharacterized protein 92.0 0.084 2.9E-06 46.7 3.1 36 17-54 21-57 (220)
394 3ghy_A Ketopantoate reductase 91.9 0.16 5.3E-06 48.1 5.1 33 19-53 3-35 (335)
395 3k96_A Glycerol-3-phosphate de 91.9 0.17 5.7E-06 48.4 5.2 36 17-54 27-62 (356)
396 2hjr_A Malate dehydrogenase; m 91.9 0.21 7.2E-06 47.1 5.9 35 18-54 13-48 (328)
397 2ewd_A Lactate dehydrogenase,; 91.8 0.22 7.5E-06 46.7 5.9 35 18-54 3-38 (317)
398 3vtf_A UDP-glucose 6-dehydroge 91.7 0.2 6.8E-06 49.2 5.7 38 16-55 18-55 (444)
399 1zud_1 Adenylyltransferase THI 91.7 0.29 9.9E-06 44.3 6.4 36 18-54 27-62 (251)
400 2v6b_A L-LDH, L-lactate dehydr 91.7 0.19 6.4E-06 46.9 5.3 32 20-53 1-34 (304)
401 3k6j_A Protein F01G10.3, confi 91.7 0.23 8E-06 49.0 6.2 37 17-55 52-88 (460)
402 4ffl_A PYLC; amino acid, biosy 91.7 0.21 7.1E-06 47.6 5.8 35 19-55 1-35 (363)
403 3gg2_A Sugar dehydrogenase, UD 91.7 0.18 6.1E-06 49.9 5.4 34 20-55 3-36 (450)
404 1pjc_A Protein (L-alanine dehy 91.7 0.2 7E-06 47.9 5.7 35 18-54 166-200 (361)
405 2a9f_A Putative malic enzyme ( 91.7 0.19 6.5E-06 48.3 5.3 36 17-54 186-222 (398)
406 1bg6_A N-(1-D-carboxylethyl)-L 91.7 0.2 6.7E-06 47.6 5.5 33 19-53 4-36 (359)
407 1y8q_A Ubiquitin-like 1 activa 91.6 0.53 1.8E-05 44.7 8.5 36 18-54 35-70 (346)
408 1pjq_A CYSG, siroheme synthase 91.6 0.18 6.2E-06 50.0 5.3 34 18-53 11-44 (457)
409 1jw9_B Molybdopterin biosynthe 91.5 0.2 6.9E-06 45.3 5.2 35 18-54 30-65 (249)
410 1vl6_A Malate oxidoreductase; 91.5 0.2 7E-06 48.0 5.4 35 17-53 190-225 (388)
411 3hn2_A 2-dehydropantoate 2-red 91.5 0.15 5.1E-06 47.7 4.4 32 20-53 3-34 (312)
412 2vns_A Metalloreductase steap3 91.4 0.2 7E-06 44.0 5.0 35 17-53 26-60 (215)
413 3gpi_A NAD-dependent epimerase 91.4 0.23 7.8E-06 45.4 5.5 36 18-55 2-37 (286)
414 2dkh_A 3-hydroxybenzoate hydro 91.4 0.51 1.7E-05 48.8 8.7 35 159-213 32-66 (639)
415 1y6j_A L-lactate dehydrogenase 91.2 0.23 8E-06 46.6 5.4 37 18-54 6-42 (318)
416 3h5n_A MCCB protein; ubiquitin 91.2 0.64 2.2E-05 44.3 8.5 36 18-54 117-152 (353)
417 3g0o_A 3-hydroxyisobutyrate de 91.2 0.25 8.5E-06 45.9 5.5 35 18-54 6-40 (303)
418 3ado_A Lambda-crystallin; L-gu 91.2 0.23 7.7E-06 46.7 5.2 35 18-54 5-39 (319)
419 4dll_A 2-hydroxy-3-oxopropiona 91.1 0.22 7.4E-06 46.8 5.1 36 17-54 29-64 (320)
420 2dpo_A L-gulonate 3-dehydrogen 91.0 0.23 8E-06 46.6 5.2 35 18-54 5-39 (319)
421 1nyt_A Shikimate 5-dehydrogena 91.0 0.27 9.4E-06 44.9 5.6 34 18-53 118-151 (271)
422 2eez_A Alanine dehydrogenase; 90.9 0.27 9.4E-06 47.1 5.7 34 18-53 165-198 (369)
423 3pqe_A L-LDH, L-lactate dehydr 90.8 0.3 1E-05 46.0 5.7 37 17-53 3-39 (326)
424 4b4o_A Epimerase family protei 90.8 0.31 1.1E-05 44.8 5.8 34 20-55 1-35 (298)
425 1guz_A Malate dehydrogenase; o 90.8 0.29 9.8E-06 45.8 5.6 35 20-54 1-35 (310)
426 1t2d_A LDH-P, L-lactate dehydr 90.7 0.33 1.1E-05 45.6 6.0 34 19-54 4-38 (322)
427 3g17_A Similar to 2-dehydropan 90.7 0.18 6.1E-06 46.7 4.0 33 20-54 3-35 (294)
428 3ew7_A LMO0794 protein; Q8Y8U8 90.6 0.31 1.1E-05 42.3 5.4 33 20-54 1-34 (221)
429 3tl2_A Malate dehydrogenase; c 90.6 0.32 1.1E-05 45.6 5.7 35 17-53 6-41 (315)
430 1mv8_A GMD, GDP-mannose 6-dehy 90.6 0.22 7.5E-06 49.0 4.7 33 20-54 1-33 (436)
431 3gvi_A Malate dehydrogenase; N 90.5 0.34 1.2E-05 45.6 5.8 36 17-54 5-41 (324)
432 3vku_A L-LDH, L-lactate dehydr 90.5 0.32 1.1E-05 45.8 5.6 37 16-52 6-42 (326)
433 4id9_A Short-chain dehydrogena 90.5 0.26 9E-06 46.3 5.1 39 16-56 16-55 (347)
434 3pid_A UDP-glucose 6-dehydroge 90.5 0.29 9.8E-06 48.0 5.4 35 18-55 35-69 (432)
435 2vhw_A Alanine dehydrogenase; 90.5 0.31 1.1E-05 46.9 5.7 34 18-53 167-200 (377)
436 3phh_A Shikimate dehydrogenase 90.5 0.36 1.2E-05 44.1 5.8 34 19-54 118-151 (269)
437 3pef_A 6-phosphogluconate dehy 90.4 0.32 1.1E-05 44.7 5.5 34 20-55 2-35 (287)
438 3e8x_A Putative NAD-dependent 90.3 0.34 1.2E-05 42.8 5.4 36 17-54 19-55 (236)
439 2o3j_A UDP-glucose 6-dehydroge 90.3 0.29 9.8E-06 48.8 5.4 37 18-54 8-44 (481)
440 3p7m_A Malate dehydrogenase; p 90.3 0.38 1.3E-05 45.2 6.0 36 17-54 3-39 (321)
441 1jay_A Coenzyme F420H2:NADP+ o 90.2 0.32 1.1E-05 42.3 5.1 32 20-53 1-33 (212)
442 3ego_A Probable 2-dehydropanto 90.2 0.33 1.1E-05 45.3 5.4 31 20-53 3-33 (307)
443 2egg_A AROE, shikimate 5-dehyd 90.2 0.33 1.1E-05 45.1 5.4 34 18-53 140-174 (297)
444 2h78_A Hibadh, 3-hydroxyisobut 90.2 0.27 9.3E-06 45.5 4.8 35 18-54 2-36 (302)
445 1hdo_A Biliverdin IX beta redu 90.2 0.42 1.4E-05 40.9 5.8 33 20-54 4-37 (206)
446 3h2s_A Putative NADH-flavin re 90.1 0.35 1.2E-05 42.1 5.3 32 20-53 1-33 (224)
447 1dlj_A UDP-glucose dehydrogena 90.1 0.26 9E-06 47.9 4.8 32 20-54 1-32 (402)
448 3ius_A Uncharacterized conserv 90.1 0.33 1.1E-05 44.2 5.3 34 19-54 5-38 (286)
449 3l9w_A Glutathione-regulated p 90.0 0.3 1E-05 47.7 5.1 35 18-54 3-37 (413)
450 1a5z_A L-lactate dehydrogenase 90.0 0.31 1.1E-05 45.7 5.1 32 20-53 1-34 (319)
451 4e21_A 6-phosphogluconate dehy 90.0 0.36 1.2E-05 46.1 5.5 36 17-54 20-55 (358)
452 1txg_A Glycerol-3-phosphate de 89.9 0.3 1E-05 45.8 5.0 31 20-52 1-31 (335)
453 1z82_A Glycerol-3-phosphate de 89.8 0.36 1.2E-05 45.5 5.5 33 19-53 14-46 (335)
454 1zej_A HBD-9, 3-hydroxyacyl-CO 89.7 0.39 1.3E-05 44.5 5.4 34 18-54 11-44 (293)
455 1ur5_A Malate dehydrogenase; o 89.7 0.42 1.4E-05 44.7 5.7 33 20-54 3-36 (309)
456 1p77_A Shikimate 5-dehydrogena 89.7 0.29 1E-05 44.8 4.5 35 18-54 118-152 (272)
457 4dgk_A Phytoene dehydrogenase; 89.6 0.18 6.3E-06 50.1 3.4 35 378-413 455-489 (501)
458 2i6t_A Ubiquitin-conjugating e 89.6 0.38 1.3E-05 44.8 5.3 37 18-54 13-49 (303)
459 4a7p_A UDP-glucose dehydrogena 89.5 0.38 1.3E-05 47.4 5.5 35 19-55 8-42 (446)
460 3l6d_A Putative oxidoreductase 89.5 0.46 1.6E-05 44.2 5.8 35 18-54 8-42 (306)
461 3qha_A Putative oxidoreductase 89.4 0.28 9.6E-06 45.4 4.2 35 19-55 15-49 (296)
462 3hwr_A 2-dehydropantoate 2-red 89.4 0.39 1.3E-05 45.0 5.3 31 18-50 18-48 (318)
463 1zcj_A Peroxisomal bifunctiona 89.4 0.43 1.5E-05 47.3 5.8 35 18-54 36-70 (463)
464 2rir_A Dipicolinate synthase, 89.4 0.43 1.5E-05 44.3 5.5 36 16-53 154-189 (300)
465 1oju_A MDH, malate dehydrogena 89.4 0.39 1.3E-05 44.6 5.1 35 20-54 1-35 (294)
466 3d4o_A Dipicolinate synthase s 89.4 0.44 1.5E-05 44.0 5.6 35 17-53 153-187 (293)
467 2uyy_A N-PAC protein; long-cha 89.3 0.46 1.6E-05 44.2 5.7 35 18-54 29-63 (316)
468 3fi9_A Malate dehydrogenase; s 89.3 0.48 1.6E-05 45.0 5.8 36 18-53 7-43 (343)
469 3qsg_A NAD-binding phosphogluc 89.2 0.39 1.3E-05 44.9 5.1 35 18-54 23-58 (312)
470 3d0o_A L-LDH 1, L-lactate dehy 89.2 0.52 1.8E-05 44.2 5.9 36 18-53 5-40 (317)
471 4aj2_A L-lactate dehydrogenase 89.1 0.47 1.6E-05 44.8 5.6 38 16-53 16-53 (331)
472 3ldh_A Lactate dehydrogenase; 89.1 0.55 1.9E-05 44.2 6.0 36 18-53 20-55 (330)
473 3pdu_A 3-hydroxyisobutyrate de 89.0 0.3 1E-05 44.9 4.1 33 20-54 2-34 (287)
474 2pv7_A T-protein [includes: ch 89.0 0.53 1.8E-05 43.6 5.8 35 18-54 20-55 (298)
475 2f1k_A Prephenate dehydrogenas 89.0 0.47 1.6E-05 43.3 5.4 32 20-53 1-32 (279)
476 1ldn_A L-lactate dehydrogenase 89.0 0.57 1.9E-05 43.9 6.0 36 18-53 5-40 (316)
477 2q3e_A UDP-glucose 6-dehydroge 88.9 0.39 1.3E-05 47.6 5.2 36 19-54 5-40 (467)
478 2zqz_A L-LDH, L-lactate dehydr 88.9 0.54 1.8E-05 44.3 5.8 36 17-52 7-42 (326)
479 3jyo_A Quinate/shikimate dehyd 88.9 0.52 1.8E-05 43.4 5.6 35 17-53 125-160 (283)
480 3dhn_A NAD-dependent epimerase 88.7 0.44 1.5E-05 41.7 4.8 35 19-55 4-39 (227)
481 1leh_A Leucine dehydrogenase; 88.6 0.63 2.2E-05 44.5 6.2 34 17-52 171-204 (364)
482 3tnl_A Shikimate dehydrogenase 88.6 0.53 1.8E-05 44.1 5.5 35 17-53 152-187 (315)
483 3ggo_A Prephenate dehydrogenas 88.6 0.61 2.1E-05 43.6 5.9 34 19-54 33-68 (314)
484 3nep_X Malate dehydrogenase; h 88.4 0.51 1.7E-05 44.2 5.3 35 20-54 1-35 (314)
485 2g5c_A Prephenate dehydrogenas 88.4 0.56 1.9E-05 42.8 5.5 32 20-53 2-35 (281)
486 2pzm_A Putative nucleotide sug 88.3 0.66 2.3E-05 43.3 6.1 37 16-54 17-54 (330)
487 2hk9_A Shikimate dehydrogenase 88.3 0.44 1.5E-05 43.6 4.7 34 18-53 128-161 (275)
488 2aef_A Calcium-gated potassium 88.3 0.23 7.8E-06 44.2 2.7 33 18-53 8-40 (234)
489 3pwz_A Shikimate dehydrogenase 88.2 0.62 2.1E-05 42.6 5.6 35 17-53 118-153 (272)
490 3b1f_A Putative prephenate deh 88.1 0.6 2E-05 42.8 5.5 36 18-53 5-40 (290)
491 3vps_A TUNA, NAD-dependent epi 88.1 0.58 2E-05 43.1 5.5 36 18-55 6-42 (321)
492 3q2o_A Phosphoribosylaminoimid 88.1 0.73 2.5E-05 44.3 6.3 37 17-55 12-48 (389)
493 3tri_A Pyrroline-5-carboxylate 87.9 0.57 1.9E-05 43.0 5.2 35 18-54 2-39 (280)
494 3ond_A Adenosylhomocysteinase; 87.9 0.61 2.1E-05 46.2 5.6 35 17-53 263-297 (488)
495 3dfu_A Uncharacterized protein 87.9 0.2 6.8E-06 44.8 2.0 35 17-53 4-38 (232)
496 1tt5_B Ubiquitin-activating en 87.8 2.2 7.7E-05 41.7 9.7 35 18-53 39-73 (434)
497 3don_A Shikimate dehydrogenase 87.8 0.38 1.3E-05 44.2 3.9 36 18-55 116-152 (277)
498 1evy_A Glycerol-3-phosphate de 87.8 0.41 1.4E-05 45.7 4.3 32 21-54 17-48 (366)
499 3fbt_A Chorismate mutase and s 87.8 0.61 2.1E-05 42.9 5.2 36 17-54 120-156 (282)
500 3t4e_A Quinate/shikimate dehyd 87.7 0.66 2.2E-05 43.4 5.5 35 17-53 146-181 (312)
No 1
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=2.4e-44 Score=363.00 Aligned_cols=374 Identities=42% Similarity=0.681 Sum_probs=295.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-c------CCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK-A------HQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFF 90 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~-~------g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
++++|+||||||||+++|..|++ . + .+|+|||+.+.+||.+.|++.|.+...+++..++.+.++..+++++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g--~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~ 79 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLD--MAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFF 79 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCC--EEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCC--CeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 46799999999999999999999 7 6 9999999999999999999988888888888888888888899999
Q ss_pred eceEeceEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCC-CCCCCCCCCCCeEEEEcCCh
Q 014990 91 GNVTLGSSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDG-KNLSPDLKSTDTAVILGQGN 169 (415)
Q Consensus 91 ~~~~v~~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~k~V~VVG~G~ 169 (415)
.++.+++.+++++....||+||+|||+..++.+++||.+.++++++.++..|++.+++. .... .+ .+++|+|||+|+
T Consensus 80 ~~v~v~~~v~~~~~~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~-~~-~~~~vvVIG~G~ 157 (456)
T 1lqt_A 80 GNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSP-DL-SGARAVVIGNGN 157 (456)
T ss_dssp ESCCBTTTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCC-CC-CSSEEEEECCSH
T ss_pred eeEEECCEEEECCCeEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchh-hc-CCCEEEEECCCH
Confidence 88777666666555668999999999954788899999888999999998888766443 1111 22 689999999999
Q ss_pred hHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcH
Q 014990 170 VALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDE 249 (415)
Q Consensus 170 sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~ 249 (415)
+|+|+|..|.+..++|..+||...+.+.++..+.++|+++.|+.++...|+.+|++++.+.|++...+...++. .+...
T Consensus 158 ~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~-~~~~~ 236 (456)
T 1lqt_A 158 VALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELD-GITDE 236 (456)
T ss_dssp HHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGT-TCCHH
T ss_pred HHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhc-cchhh
Confidence 99999999998778899999999999999999988999999999999999999999999988887777666653 12222
Q ss_pred HhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCc
Q 014990 250 EEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGE 329 (415)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~ 329 (415)
.....++.+++..+.+.+.... .+....++|.++++..+.++. . ++.+.++++.+..+..+..|......+|+
T Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~gv~i~~~~~~~~i~--~--~~~v~~v~~~~~~~~~~~~~~~~~~~~g~ 309 (456)
T 1lqt_A 237 DAAAVGKVCKQNIKVLRGYADR---EPRPGHRRMVFRFLTSPIEIK--G--KRKVERIVLGRNELVSDGSGRVAAKDTGE 309 (456)
T ss_dssp HHHHHCHHHHHHHHHHHHHHTC---C-CTTSEEEEEECSEEEEEEE--C--SSSCCEEEEEEEEEEECSSSSEEEEEEEE
T ss_pred hhhhccHHHHHHHHHHHHHhhc---CCCCCCceEEEEeCCCCeEEe--c--CCcEeEEEEEEEEecCCCcccccccCCCc
Confidence 2223345666667777665431 001112799999999999997 4 46777788876544322222222223455
Q ss_pred eEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCC-cccCCeeeeeccccCCccchhhhhhhHHHHH
Q 014990 330 FEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSS-QVENGLYVCGWLKRGPTGIIATNLYCAEETV 408 (415)
Q Consensus 330 ~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~-t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a 408 (415)
.++++||+||+|+|++|+++. ++.++++|.+.+|+. ++ ++.|||||+|||++++.+++..|+.||+.+|
T Consensus 310 ~~~i~~d~vi~a~G~~p~~l~--------gl~~d~~g~i~vn~~--~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a 379 (456)
T 1lqt_A 310 REELPAQLVVRSVGYRGVPTP--------GLPFDDQSGTIPNVG--GRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTV 379 (456)
T ss_dssp EEEEECSEEEECSCEECCCCT--------TSCCBTTTTBCCEET--TEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHH
T ss_pred eEEEEcCEEEEccccccCCCC--------CCcccCCCCeeECCC--CcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHH
Confidence 568999999999999997632 345566677888776 55 7899999999999888877767999999999
Q ss_pred hhccc
Q 014990 409 SSLSL 413 (415)
Q Consensus 409 ~~i~~ 413 (415)
.+|..
T Consensus 380 ~~i~~ 384 (456)
T 1lqt_A 380 DTLIK 384 (456)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 2
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=4.3e-44 Score=361.52 Aligned_cols=380 Identities=47% Similarity=0.780 Sum_probs=292.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+||||||||+++|..|++.+++.+|+|||+.+.+||.+.+++.|.+...+++...+.+.+++.+++++.++.+++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 84 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGR 84 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBTT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEee
Confidence 56899999999999999999999987799999999999999999998888877788888888888889999999988876
Q ss_pred EEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHH
Q 014990 98 SVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARI 177 (415)
Q Consensus 98 ~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~ 177 (415)
.++.++....||+||+|||+..++.|++||.+.++++++.++..+++..++.......+ .+++|+|||+|++|+|+|..
T Consensus 85 ~V~~~~~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~-~~~~vvVIGgG~~g~e~A~~ 163 (460)
T 1cjc_A 85 DVTVQELQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDL-SCDTAVILGQGNVALDVARI 163 (460)
T ss_dssp TBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCT-TSSEEEEESCSHHHHHHHHH
T ss_pred EEEeccceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCC-CCCEEEEECCCHHHHHHHHH
Confidence 66665555689999999999546888999998889999999988887665443332223 58999999999999999999
Q ss_pred HhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHH
Q 014990 178 LLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRI 257 (415)
Q Consensus 178 L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 257 (415)
|.+..++|..+||.+.+++.++..+.++|+++.|+.+...+|+.+|++++.+.|+....+...++.. .........+.
T Consensus 164 L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~--~~~~~~~~~~~ 241 (460)
T 1cjc_A 164 LLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLG--LQDRIKEAARP 241 (460)
T ss_dssp HHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTT--HHHHTTTSCHH
T ss_pred HhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcc--hhhhhhhccHH
Confidence 9998899999999999999999999989999999999999999999999887776666554444321 00011112344
Q ss_pred HHHHHHHHHHHHhccCC-----CCCCCceeEEEEeccccccccccCCCCC-CeeeEEEeeeeecCCCCCcceeccCCceE
Q 014990 258 QRRVYELLSKAAASASS-----QPMLGQRELHFVFFRKPDSFLESNERSG-HVSGVHFEKTALKGGGPGKQYAVGTGEFE 331 (415)
Q Consensus 258 ~~~~~~~l~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~v~~~~~~~~-~v~~v~~~~~~~~~~~~g~~~~~~~g~~~ 331 (415)
++++.+.+.+.....+. .+....+||.++++..+.++. .++++ .+.++++.+..+.+. .+....+.+|+.+
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~--~~~~~~~v~~v~~~~~~l~~~-~~~~~~~~~g~~~ 318 (460)
T 1cjc_A 242 RKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVL--PSPDGRRAAGIRLAVTRLEGI-GEATRAVPTGDVE 318 (460)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEE--ECTTSSSEEEEEEEEEEEESS-GGGCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEE--cCCCCceEEEEEEEEEEEccc-cCCCcccCCCceE
Confidence 55566666554421000 000123899999999999997 41125 787888765433211 0111112245557
Q ss_pred EEecCeeEEeeccCCccCCCCcccCCCCc-cccCCCceeeccCCCCCcc-cCCeeeeeccccCCccchhhhhhhHHHHHh
Q 014990 332 DLDCGMVLKSIGYKSVPVNGLPFDNHKGI-VPNIRGRVLKNISGDSSQV-ENGLYVCGWLKRGPTGIIATNLYCAEETVS 409 (415)
Q Consensus 332 ~i~~D~vi~atG~~p~~~~~~~~~~~~g~-~~~~~G~i~v~~~~~~~t~-~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~ 409 (415)
+++||+||+++|++|+.+ .|+ .++++|.+.+|+. ++++ +|||||+|||++++.+++..|+.||+.+|.
T Consensus 319 ~i~~d~Vi~a~G~~p~~l--------~gl~~~d~~g~i~vn~~--~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~ 388 (460)
T 1cjc_A 319 DLPCGLVLSSIGYKSRPI--------DPSVPFDPKLGVVPNME--GRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQ 388 (460)
T ss_dssp EEECSEEEECCCEECCCC--------CTTSCCBTTTTBCCEET--TEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHH
T ss_pred EEEcCEEEECCCCCCCCC--------CCCcccccCCCeeECCC--CcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHH
Confidence 899999999999999763 345 5666788888876 7788 799999999998888777689999999999
Q ss_pred hccc
Q 014990 410 SLSL 413 (415)
Q Consensus 410 ~i~~ 413 (415)
+|..
T Consensus 389 ~i~~ 392 (460)
T 1cjc_A 389 ILLQ 392 (460)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 3
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=2.7e-40 Score=333.15 Aligned_cols=316 Identities=22% Similarity=0.323 Sum_probs=240.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
++.++|+||||||||+++|..|++.| ++|+|||+.+.+||.+.|++ |.+..++++..+..+.++..+++++.++.++
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G--~~V~v~e~~~~~GG~l~~gi-p~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 196 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKG--YEVHVYDRYDRMGGLLVYGI-PGFKLEKSVVERRVKLLADAGVIYHPNFEVG 196 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHT--CCEEEECSSSSCSTHHHHTS-CTTTSCHHHHHHHHHHHHHTTCEEETTCCBT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeccCCCCCeeeecC-CCccCCHHHHHHHHHHHHHCCcEEEeCCEec
Confidence 46789999999999999999999999 99999999999999999988 7776777888888888888999999999887
Q ss_pred eEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcC--CCCCCC-CC--CCCCCCCeEEEEcCChhH
Q 014990 97 SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNG--HPDGKN-LS--PDLKSTDTAVILGQGNVA 171 (415)
Q Consensus 97 ~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~--~~~~~~-~~--~~~~~~k~V~VVG~G~sg 171 (415)
.+++.++....||+||+|||+..++.+++||.+.++++++.+|+...+. ..+... .. .....+|+|+|||+|++|
T Consensus 197 ~~v~~~~~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a 276 (456)
T 2vdc_G 197 RDASLPELRRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTA 276 (456)
T ss_dssp TTBCHHHHHSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHH
T ss_pred cEEEhhHhHhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhH
Confidence 6666666666899999999996688889999988899998887664321 000000 00 112368999999999999
Q ss_pred HHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHh
Q 014990 172 LDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEE 251 (415)
Q Consensus 172 ~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~ 251 (415)
+|+|..+.+ .+.++|+++.|++... +|....+
T Consensus 277 ~d~A~~~~r--------------------~Ga~~Vtiv~r~~~~~----------------------------~p~~~~e 308 (456)
T 2vdc_G 277 MDCVRTAIR--------------------QGATSVKCLYRRDRKN----------------------------MPGSQRE 308 (456)
T ss_dssp HHHHHHHHH--------------------TTCSEEEEECSSCSTT----------------------------CSSCHHH
T ss_pred HHHHHHHHH--------------------cCCCEEEEEEeCCccC----------------------------CCCCHHH
Confidence 999998886 5777899999986432 3332221
Q ss_pred hhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeec-CCCCCcceecc-CCc
Q 014990 252 MKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALK-GGGPGKQYAVG-TGE 329 (415)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~-~~~~g~~~~~~-~g~ 329 (415)
+ +.+. ++||+++++..+.++. . ++++.++++.+..+. .+.+|.+.... +|+
T Consensus 309 ~----------~~~~-------------~~Gv~~~~~~~~~~i~--~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~ 361 (456)
T 2vdc_G 309 V----------AHAE-------------EEGVEFIWQAAPEGFT--G--DTVVTGVRAVRIHLGVADATGRQTPQVIEGS 361 (456)
T ss_dssp H----------HHHH-------------HTTCEEECCSSSCCEE--E--EEEEETTEEEEEEEEEEEECTTCCEEEEEEE
T ss_pred H----------HHHH-------------HCCCEEEeCCCceEEe--C--CCcEEEEEEEEEEecccCCcCCccccccCCc
Confidence 1 1111 5689999999999997 4 566655665543321 11234322222 456
Q ss_pred eEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHh
Q 014990 330 FEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVS 409 (415)
Q Consensus 330 ~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~ 409 (415)
+.++++|+||+|+|+.|+... .+....++.++++|++.+|+.+ ++|+.|||||+|||++++..+. .|+.||+.||.
T Consensus 362 ~~~i~aD~Vi~A~G~~p~~~~--~~l~~~gl~~~~~G~i~vd~~~-~~Ts~~~VfA~GD~~~g~~~v~-~A~~~G~~aA~ 437 (456)
T 2vdc_G 362 EFTVQADLVIKALGFEPEDLP--NAFDEPELKVTRWGTLLVDHRT-KMTNMDGVFAAGDIVRGASLVV-WAIRDGRDAAE 437 (456)
T ss_dssp EEEEECSEEEECSCEECCCHH--HHHHSTTSCBCTTSSBCCCTTT-CBCSSTTEEECGGGGSSCCSHH-HHHHHHHHHHH
T ss_pred EEEEECCEEEECCCCCCCcch--hhcccCCeeECCCCCEEECCCC-CcCCCCCEEEeccccCCchHHH-HHHHHHHHHHH
Confidence 678999999999999986510 1445667888889999999875 7899999999999998776555 79999999999
Q ss_pred hcccc
Q 014990 410 SLSLI 414 (415)
Q Consensus 410 ~i~~~ 414 (415)
+|++.
T Consensus 438 ~i~~~ 442 (456)
T 2vdc_G 438 GIHAY 442 (456)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98753
No 4
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4e-34 Score=274.29 Aligned_cols=285 Identities=18% Similarity=0.235 Sum_probs=186.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc-cccCCC---CCCc--chHHHHHHHHHHhhccCeEEE
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-VRSGVA---PDHP--ETKIVINQFSRVVQHERCSFF 90 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~-~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~ 90 (415)
+..++|+||||||||++||.+|++.| .+|+|||+.. +||. ...+.. |.+. ...++.........+.+..+.
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g--~~V~liE~~~-~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRAN--LKTVMIERGI-PGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQ 80 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC-TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEecCC-CCCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccc
Confidence 34689999999999999999999999 9999999865 5554 333332 3322 223455555555555555555
Q ss_pred eceEec-------eEEEecccccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCCCCCC
Q 014990 91 GNVTLG-------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 91 ~~~~v~-------~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k 160 (415)
.+.... ..+........||+||||||+ .|+.|++||.+. .++.+. ...... ...+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs-~~~~~~ipG~~~~~~~~v~~~-~~~~~~------------~~~~k 146 (312)
T 4gcm_A 81 YGDIKSVEDKGEYKVINFGNKELTAKAVIIATGA-EYKKIGVPGEQELGGRGVSYC-AVCDGA------------FFKNK 146 (312)
T ss_dssp ECCCCEEEECSSCEEEECSSCEEEEEEEEECCCE-EECCCCCTTTTTTBTTTEESC-HHHHGG------------GGTTC
T ss_pred ceeeeeeeeeecceeeccCCeEEEeceeEEcccC-ccCcCCCCChhhhCCccEEee-eccCcc------------ccCCC
Confidence 443321 122333334579999999999 789999999763 233332 222111 12589
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEccc
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRED 240 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (415)
+|+|||+|++|+|+|..|.+ ...+|+++.|++.+..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~---------------------~g~~Vtlv~~~~~~~~----------------------- 182 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTK---------------------FADKVTIVHRRDELRA----------------------- 182 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTT---------------------TCSEEEEECSSSSCCS-----------------------
T ss_pred EEEEECCCHHHHHHHHHHHh---------------------cCCEEEEEecccccCc-----------------------
Confidence 99999999999999999986 3468999999875421
Q ss_pred ccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCC
Q 014990 241 DLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPG 320 (415)
Q Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g 320 (415)
..... ...+. ..++............ . .+..........
T Consensus 183 ------~~~~~----------~~~~~-------------~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~--------- 221 (312)
T 4gcm_A 183 ------QRILQ----------DRAFK-------------NDKIDFIWSHTLKSIN--E-KDGKVGSVTLTS--------- 221 (312)
T ss_dssp ------CHHHH----------HHHHH-------------CTTEEEECSEEEEEEE--E-ETTEEEEEEEEE---------
T ss_pred ------chhHH----------HHHHH-------------hcCcceeeecceeeee--c-cccccccceeee---------
Confidence 10000 00111 3345555444433333 1 122111121111
Q ss_pred cceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhh
Q 014990 321 KQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATN 400 (415)
Q Consensus 321 ~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a 400 (415)
...++...+++|.|++++|.+|+. .+....++ .+++|++.+|++ ++||.|||||+|||+..+...+..|
T Consensus 222 ----~~~~~~~~~~~d~v~~~~g~~~~~----~~~~~~g~-~~~~G~I~vd~~--~~Ts~pgIyA~GDv~~~~~~~~~~A 290 (312)
T 4gcm_A 222 ----TKDGSEETHEADGVFIYIGMKPLT----APFKDLGI-TNDVGYIVTKDD--MTTSVPGIFAAGDVRDKGLRQIVTA 290 (312)
T ss_dssp ----TTTCCEEEEECSEEEECSCEEESC----GGGGGGTC-BCTTSCBCCCTT--SBCSSTTEEECSTTBSCSCCSHHHH
T ss_pred ----ecCCceeEEeeeeEEeecCCCcCc----hhHHhcce-ecCCCeEeeCCC--CccCCCCEEEEeecCCCcchHHHHH
Confidence 124566789999999999999976 33344444 456899999987 8999999999999986444445579
Q ss_pred hhhHHHHHhhcccc
Q 014990 401 LYCAEETVSSLSLI 414 (415)
Q Consensus 401 ~~~g~~~a~~i~~~ 414 (415)
+.||+.||.+|.+.
T Consensus 291 ~~~G~~AA~~i~~~ 304 (312)
T 4gcm_A 291 TGDGSIAAQSAAEY 304 (312)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 5
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=3.5e-34 Score=274.36 Aligned_cols=287 Identities=15% Similarity=0.178 Sum_probs=195.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC----CCCccccC-----C--CCCCcchHHHHHHHHHHhhccC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT----PFGLVRSG-----V--APDHPETKIVINQFSRVVQHER 86 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~----~gg~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~ 86 (415)
+.++|+||||||||++||.+|++.| .+|+|||+... ++|.+... . .|......++...+.+.+++.+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g--~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~ 80 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSS--LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYG 80 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcC
Confidence 4589999999999999999999999 99999998753 33332211 1 1222344567777888888888
Q ss_pred eEEEeceEece-------EEEecc-cccccCEEEEccCCCCCCCCCCCCCCCC--CeeechhhHHHhcCCCCCCCCCCCC
Q 014990 87 CSFFGNVTLGS-------SVSLSE-LRQLYHVVVLAYGAESDRALGIPGEDLI--GVHSAREFVWWYNGHPDGKNLSPDL 156 (415)
Q Consensus 87 ~~~~~~~~v~~-------~v~~~~-~~~~~d~lvlAtG~~~~~~~~i~g~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~ 156 (415)
..+........ .+...+ ....||+||||||+ .|+.|++||.+.. ...+...+..... ..
T Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~-~~~~~~ipG~~~~~~~~~~~~~~~~~~~----------~~ 149 (314)
T 4a5l_A 81 TTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGA-TAKRMHVPGEDKYWQNGVSACAICDGAV----------PI 149 (314)
T ss_dssp CEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCE-EECCCCCTTHHHHBTTTEESCHHHHTTS----------GG
T ss_pred cEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccc-cccccCCCccccccccceeeehhhhhhh----------hh
Confidence 87766554321 122222 23479999999999 7899999997632 2222222221110 12
Q ss_pred CCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEE
Q 014990 157 KSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (415)
Q Consensus 157 ~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (415)
..+++|+|||+|++|+|+|..|.+ .+ .+|+++.|...... ... +
T Consensus 150 ~~~~~vvViGgG~ig~e~A~~l~~--------------------~G-~~Vt~v~~~~~~~~--~~~-~------------ 193 (314)
T 4a5l_A 150 FRNKVLMVVGGGDAAMEEALHLTK--------------------YG-SKVIILHRRDAFRA--SKT-M------------ 193 (314)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTT--------------------TS-SEEEEECSSSSCCS--CHH-H------------
T ss_pred cCCCeEEEECCChHHHHHHHHHHH--------------------hC-Ceeeeecccccccc--cch-h------------
Confidence 268999999999999999999986 44 58999998754311 000 0
Q ss_pred EcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecC
Q 014990 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKG 316 (415)
Q Consensus 237 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~ 316 (415)
..... ...++..+....+.++. . ......++.+...
T Consensus 194 ----------------------------~~~~~---------~~~~~~~~~~~~~~~i~--~-~~~~~~~~~~~~~---- 229 (314)
T 4a5l_A 194 ----------------------------QERVL---------NHPKIEVIWNSELVELE--G-DGDLLNGAKIHNL---- 229 (314)
T ss_dssp ----------------------------HHHHH---------TCTTEEEECSEEEEEEE--E-SSSSEEEEEEEET----
T ss_pred ----------------------------hhhhh---------cccceeeEeeeeeEEEE--e-eeeccceeEEeec----
Confidence 00000 03456666666666665 3 3445555655442
Q ss_pred CCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccc
Q 014990 317 GGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGI 396 (415)
Q Consensus 317 ~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~ 396 (415)
..++++++++|.|++++|++|+. .+.. ..+..+++|.+ +|+. ++||.|||||+|||+..+...
T Consensus 230 ---------~~~~~~~i~~d~vi~a~G~~pn~----~~l~-~~~~~~~~G~i-v~~~--~~Ts~pgIyA~GDv~~~~~~~ 292 (314)
T 4a5l_A 230 ---------VSGEYKVVPVAGLFYAIGHSPNS----KFLG-GQVKTADDGYI-LTEG--PKTSVDGVFACGDVCDRVYRQ 292 (314)
T ss_dssp ---------TTCCEEEEECSEEEECSCEEESC----GGGT-TSSCBCTTSCB-CCBT--TBCSSTTEEECSTTTCSSCCC
T ss_pred ---------ccccceeeccccceEecccccCh----hHhc-ccceEcCCeeE-eCCC--CccCCCCEEEEEeccCCcchH
Confidence 14566799999999999999976 2322 34567778888 4444 899999999999999777545
Q ss_pred hhhhhhhHHHHHhhcccc
Q 014990 397 IATNLYCAEETVSSLSLI 414 (415)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~ 414 (415)
...|+.||+.||.+|++.
T Consensus 293 ~~~A~~~G~~AA~~~~~y 310 (314)
T 4a5l_A 293 AIVAAGSGCMAALSCEKW 310 (314)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 557999999999998764
No 6
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=6.7e-34 Score=274.71 Aligned_cols=292 Identities=14% Similarity=0.158 Sum_probs=207.7
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC----CCCCCccccCC----CCC---CcchHHHHHHHHHHh
Q 014990 14 ALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL----PTPFGLVRSGV----APD---HPETKIVINQFSRVV 82 (415)
Q Consensus 14 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~----~~~gg~~~~~~----~~~---~~~~~~~~~~~~~~~ 82 (415)
++.+..++|+|||||+||+++|..|++.+ ++|+|||+. ..+||.+.+.. .|. .....++..++.+.+
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLARAE--IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQS 94 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHH
Confidence 33456789999999999999999999999 999999994 46888765431 122 234567788888888
Q ss_pred hccCeEEEeceEeceE-------EEe----cccccccCEEEEccCCCCCCCCCCCCCC---CCCeeechhhHHHhcCCCC
Q 014990 83 QHERCSFFGNVTLGSS-------VSL----SELRQLYHVVVLAYGAESDRALGIPGED---LIGVHSAREFVWWYNGHPD 148 (415)
Q Consensus 83 ~~~~~~~~~~~~v~~~-------v~~----~~~~~~~d~lvlAtG~~~~~~~~i~g~~---~~~v~~~~~~~~~~~~~~~ 148 (415)
++.+++++.++.+..+ +.. +.....||+||+|||+ .++.|++||.+ ...+.+... .. ...
T Consensus 95 ~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~-~~~~~~~~g~~~~~~~~~~~~~~-~~---~~~- 168 (338)
T 3itj_A 95 TKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA-SAKRMHLPGEETYWQKGISACAV-CD---GAV- 168 (338)
T ss_dssp HHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE-EECCCCCTTHHHHBTTTEESCHH-HH---TTS-
T ss_pred HHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC-CcCCCCCCCchhccCccEEEchh-cc---cch-
Confidence 8889999888743221 222 1123479999999999 67888888864 223333221 11 110
Q ss_pred CCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHH
Q 014990 149 GKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREIL 228 (415)
Q Consensus 149 ~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~ 228 (415)
....+++|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+.. .+
T Consensus 169 ------~~~~~~~v~vvG~G~~g~e~a~~l~~--------------------~-g~~v~~v~~~~~~~~---~~------ 212 (338)
T 3itj_A 169 ------PIFRNKPLAVIGGGDSACEEAQFLTK--------------------Y-GSKVFMLVRKDHLRA---ST------ 212 (338)
T ss_dssp ------GGGTTSEEEEECSSHHHHHHHHHHTT--------------------T-SSEEEEECSSSSCCS---CH------
T ss_pred ------hhcCCCEEEEECCCHHHHHHHHHHHh--------------------c-CCEEEEEEcCCccCC---CH------
Confidence 01268999999999999999999986 3 358999998865321 00
Q ss_pred cCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEE
Q 014990 229 GIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVH 308 (415)
Q Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~ 308 (415)
...+.+.+ ..||+++++..+.++. . +++.+..++
T Consensus 213 -------------------------------~~~~~l~~------------~~gv~i~~~~~v~~i~--~-~~~~~~~v~ 246 (338)
T 3itj_A 213 -------------------------------IMQKRAEK------------NEKIEILYNTVALEAK--G-DGKLLNALR 246 (338)
T ss_dssp -------------------------------HHHHHHHH------------CTTEEEECSEEEEEEE--E-SSSSEEEEE
T ss_pred -------------------------------HHHHHHHh------------cCCeEEeecceeEEEE--c-ccCcEEEEE
Confidence 01111110 3489999999999997 4 345576777
Q ss_pred EeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeec
Q 014990 309 FEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGW 388 (415)
Q Consensus 309 ~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD 388 (415)
+.+. .+|++++++||.||+|+|++|+. .+... ++.++++|++.+++.. ++|+.|||||+||
T Consensus 247 ~~~~-------------~~g~~~~i~~D~vi~a~G~~p~~----~~~~~-~l~~~~~G~i~v~~~~-~~t~~~~vya~GD 307 (338)
T 3itj_A 247 IKNT-------------KKNEETDLPVSGLFYAIGHTPAT----KIVAG-QVDTDEAGYIKTVPGS-SLTSVPGFFAAGD 307 (338)
T ss_dssp EEET-------------TTTEEEEEECSEEEECSCEEECC----GGGBT-TBCBCTTSCBCCCTTS-SBCSSTTEEECGG
T ss_pred EEEC-------------CCCceEEEEeCEEEEEeCCCCCh----hHhhC-ceEecCCCcEEEcCcc-cccCCCCEEEeec
Confidence 7652 14566789999999999999965 34344 7888889999864444 8999999999999
Q ss_pred cccCCccchhhhhhhHHHHHhhcccc
Q 014990 389 LKRGPTGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 389 ~~~~~~~~~~~a~~~g~~~a~~i~~~ 414 (415)
|+..+......|+.||+.||.+|.+.
T Consensus 308 ~~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (338)
T 3itj_A 308 VQDSKYRQAITSAGSGCMAALDAEKY 333 (338)
T ss_dssp GGCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccceeeehhhhHHHHHHHHHH
Confidence 99754444557999999999998753
No 7
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=2e-33 Score=268.70 Aligned_cols=283 Identities=18% Similarity=0.225 Sum_probs=205.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEE-EcCCCCCCCccccCC----CCCCc---chHHHHHHHHHHhhccCeEE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDI-IDRLPTPFGLVRSGV----APDHP---ETKIVINQFSRVVQHERCSF 89 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~l-ie~~~~~gg~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~ 89 (415)
.+++|+|||||+||+++|..|++.+ ++|+| +|+ +.+||.+.+.. .|.+. ...++..++.+.+++.++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGG--LKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHT--CSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--CCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 5689999999999999999999999 99999 999 66677654321 13322 45678888888899899998
Q ss_pred EeceEece--------E--EEecccccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCC
Q 014990 90 FGNVTLGS--------S--VSLSELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDL 156 (415)
Q Consensus 90 ~~~~~v~~--------~--v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~ 156 (415)
+.+..+.. . +..+. ...||+||+|||+ .++.|++||.+. ..+++... .... .
T Consensus 80 ~~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~------------~ 144 (315)
T 3r9u_A 80 EMVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGS-APKKAGFKGEDEFFGKGVSTCAT-CDGF------------F 144 (315)
T ss_dssp ECCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCE-EECCCCCBTTTTTBTTTEESCHH-HHGG------------G
T ss_pred EEEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCC-CCCCCCCCChhhcCCCeEEeeec-cccc------------c
Confidence 87744322 1 11112 4579999999999 788888998763 44443322 2111 1
Q ss_pred CCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEE
Q 014990 157 KSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (415)
Q Consensus 157 ~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (415)
..+++|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+. .... +
T Consensus 145 ~~~~~v~viG~g~~~~e~a~~l~~--------------------~-g~~v~~~~~~~~~~--~~~~-~------------ 188 (315)
T 3r9u_A 145 YKNKEVAVLGGGDTALEEALYLAN--------------------I-CSKIYLIHRRDEFR--AAPS-T------------ 188 (315)
T ss_dssp GTTSEEEEECCBHHHHHHHHHHHT--------------------T-SSEEEEECSSSSCB--SCHH-H------------
T ss_pred cCcCEEEEECCCHHHHHHHHHHHh--------------------h-CCEEEEEEeCCCCC--CCHH-H------------
Confidence 257999999999999999999986 3 36899999886431 0110 0
Q ss_pred EcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecC
Q 014990 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKG 316 (415)
Q Consensus 237 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~ 316 (415)
..+++. +.||+++++..+.++. . +++.+..+++..
T Consensus 189 ------------------------~~~~~~-------------~~gv~~~~~~~v~~i~--~-~~~~~~~v~~~~----- 223 (315)
T 3r9u_A 189 ------------------------VEKVKK-------------NEKIELITSASVDEVY--G-DKMGVAGVKVKL----- 223 (315)
T ss_dssp ------------------------HHHHHH-------------CTTEEEECSCEEEEEE--E-ETTEEEEEEEEC-----
T ss_pred ------------------------HHHHHh-------------cCCeEEEeCcEEEEEE--c-CCCcEEEEEEEc-----
Confidence 011111 5689999999999987 4 344666666641
Q ss_pred CCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccC---CCC-ccccCCCceeeccCCCCCcccCCeeeeeccccC
Q 014990 317 GGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDN---HKG-IVPNIRGRVLKNISGDSSQVENGLYVCGWLKRG 392 (415)
Q Consensus 317 ~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~---~~g-~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~ 392 (415)
.+|+..++++|.||+|+|++|+. .+.. ..| +.++++|++.+|++ ++|+.|||||+|||+..
T Consensus 224 ---------~~g~~~~~~~D~vv~a~G~~p~~----~~~~~~~~~g~l~~~~~g~i~vd~~--~~t~~~~v~a~GD~~~~ 288 (315)
T 3r9u_A 224 ---------KDGSIRDLNVPGIFTFVGLNVRN----EILKQDDSKFLCNMEEGGQVSVDLK--MQTSVAGLFAAGDLRKD 288 (315)
T ss_dssp ---------TTSCEEEECCSCEEECSCEEECC----GGGBCTTSCBSSCBCTTSCBCCCTT--CBCSSTTEEECGGGBTT
T ss_pred ---------CCCCeEEeecCeEEEEEcCCCCc----hhhhcccccceeeecCCCcEEeCCC--cccCCCCEEEeecccCC
Confidence 14555689999999999999976 2322 244 77888899999996 88999999999999854
Q ss_pred CccchhhhhhhHHHHHhhcccc
Q 014990 393 PTGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 393 ~~~~~~~a~~~g~~~a~~i~~~ 414 (415)
+......|+.||+.||.+|.+.
T Consensus 289 ~~~~~~~A~~~g~~aa~~i~~~ 310 (315)
T 3r9u_A 289 APKQVICAAGDGAVAALSAMAY 310 (315)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhHHhhHHHHHHHHHHH
Confidence 4444557999999999998753
No 8
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=8.9e-34 Score=311.22 Aligned_cols=311 Identities=18% Similarity=0.229 Sum_probs=228.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
+.++|+||||||||+++|.+|++.| + +|+|||+.+.+||.+.+++ |.+..++++.+...+.++..+++++.++.++
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G--~~~Vtv~E~~~~~GG~~~~~i-p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 262 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG--YSDITIFEKQEYVGGLSTSEI-PQFRLPYDVVNFEIELMKDLGVKIICGKSLS 262 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT--CCCEEEEESSSSCSTHHHHTS-CTTTSCHHHHHHHHHHHHTTTCEEEESCCBS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--CCcEEEEeCCCCCCccccccC-CcccCCHHHHHHHHHHHHHCCcEEEcccEec
Confidence 4689999999999999999999999 8 7999999999999998888 7666667777777788888899999998875
Q ss_pred e-EEEecccc-cccCEEEEccCCCCCCCCCC-CCCC-CCCeeechhhHHHhcCC-C-CCCCCCCC-CCCCCeEEEEcCCh
Q 014990 97 S-SVSLSELR-QLYHVVVLAYGAESDRALGI-PGED-LIGVHSAREFVWWYNGH-P-DGKNLSPD-LKSTDTAVILGQGN 169 (415)
Q Consensus 97 ~-~v~~~~~~-~~~d~lvlAtG~~~~~~~~i-~g~~-~~~v~~~~~~~~~~~~~-~-~~~~~~~~-~~~~k~V~VVG~G~ 169 (415)
. +++++++. ..||+||||||+..|+.+++ +|.+ ..+++++.+|+...+.. . ........ ...+++|+|||+|+
T Consensus 263 ~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~ 342 (1025)
T 1gte_A 263 ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGD 342 (1025)
T ss_dssp TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSH
T ss_pred cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCCh
Confidence 3 45555543 58999999999954766664 4654 46889888887644211 0 00000000 11367999999999
Q ss_pred hHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcH
Q 014990 170 VALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDE 249 (415)
Q Consensus 170 sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~ 249 (415)
+|+|+|..+.+ .|.++|+++.|++... +|...
T Consensus 343 ~g~e~A~~~~~--------------------~G~~~Vtvv~r~~~~~----------------------------~~~~~ 374 (1025)
T 1gte_A 343 TAFDCATSALR--------------------CGARRVFLVFRKGFVN----------------------------IRAVP 374 (1025)
T ss_dssp HHHHHHHHHHH--------------------TTCSEEEEECSSCGGG----------------------------CCSCH
T ss_pred HHHHHHHHHHH--------------------cCCCEEEEEEecChhh----------------------------CCCCH
Confidence 99999999986 5777999999986322 22222
Q ss_pred HhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCc
Q 014990 250 EEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGE 329 (415)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~ 329 (415)
.++ +.+. ++||+++++..+.++. . +++.+.++++.+... +.+|..+.. +|+
T Consensus 375 ~e~----------~~~~-------------~~Gv~~~~~~~~~~i~--~-~~g~v~~v~~~~~~~--~~~g~~~~~-~g~ 425 (1025)
T 1gte_A 375 EEV----------ELAK-------------EEKCEFLPFLSPRKVI--V-KGGRIVAVQFVRTEQ--DETGKWNED-EDQ 425 (1025)
T ss_dssp HHH----------HHHH-------------HTTCEEECSEEEEEEE--E-ETTEEEEEEEEEEEE--CTTSCEEEE-EEE
T ss_pred HHH----------HHHH-------------HcCCEEEeCCCceEEE--c-cCCeEEEEEEEEeEE--cCCCCcccC-CCc
Confidence 111 1111 5689999998888887 4 467787787765432 223443222 355
Q ss_pred eEEEecCeeEEeeccCCccCCCCcccCC-CCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHH
Q 014990 330 FEDLDCGMVLKSIGYKSVPVNGLPFDNH-KGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETV 408 (415)
Q Consensus 330 ~~~i~~D~vi~atG~~p~~~~~~~~~~~-~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a 408 (415)
..++++|+||+|+|++|+.. .|... .|+.++++|++.+|+.+ ++|+.|||||+|||++++..+. .|+.||+.||
T Consensus 426 ~~~i~aD~Vi~A~G~~~~~~---~l~~~~~gl~~~~~G~I~vd~~~-~~Ts~~~VfA~GD~~~~~~~~~-~A~~~G~~aA 500 (1025)
T 1gte_A 426 IVHLKADVVISAFGSVLRDP---KVKEALSPIKFNRWDLPEVDPET-MQTSEPWVFAGGDIVGMANTTV-ESVNDGKQAS 500 (1025)
T ss_dssp EEEEECSEEEECSCEECCCH---HHHHHTTTSCBCTTSSBCCCTTT-CBCSSTTEEECSGGGCSCCCHH-HHHHHHHHHH
T ss_pred eEEEECCEEEECCCCCCCch---hhhhcccCceECCCCCEEECCCC-CccCCCCEEEeCCCCCCchHHH-HHHHHHHHHH
Confidence 56899999999999987431 23222 47778888999999744 8899999999999998776555 7999999999
Q ss_pred hhccc
Q 014990 409 SSLSL 413 (415)
Q Consensus 409 ~~i~~ 413 (415)
.+|+.
T Consensus 501 ~~i~~ 505 (1025)
T 1gte_A 501 WYIHK 505 (1025)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 9
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.1e-32 Score=263.68 Aligned_cols=282 Identities=21% Similarity=0.214 Sum_probs=201.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC----CCCCC---cchHHHHHHHHHHhhccCeEEE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSFF 90 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
..++|+||||||||+++|..|++.+ .+|+|||+. .+||.+.+. ..|.+ ....++..++.+.+++.+++++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQ--LSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVE 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcC--CcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 4679999999999999999999998 999999998 566655432 11222 2345667777888888888887
Q ss_pred eceEece----------EEEeccc-ccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCC
Q 014990 91 GNVTLGS----------SVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDL 156 (415)
Q Consensus 91 ~~~~v~~----------~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~ 156 (415)
.+..... .+...++ ...||+||+|||+ .++.|++||.+. ..+++.. ..... .
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~-~~~~~~i~g~~~~~~~~~~~~~-~~~~~------------~ 149 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA-DPRKLGIPGEDNFWGKGVSTCA-TCDGF------------F 149 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE-EECCCCCTTTTTTBTTTEESCH-HHHGG------------G
T ss_pred eeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC-CcCCCCCCChhhccCceEEEec-cCCHH------------H
Confidence 6543321 1222222 3479999999999 677888888752 2333322 22111 1
Q ss_pred CCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEE
Q 014990 157 KSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (415)
Q Consensus 157 ~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (415)
..+++|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+.. .+.+
T Consensus 150 ~~~~~v~VvG~G~~g~e~A~~l~~--------------------~-g~~Vtlv~~~~~~~~---~~~~------------ 193 (325)
T 2q7v_A 150 YKGKKVVVIGGGDAAVEEGMFLTK--------------------F-ADEVTVIHRRDTLRA---NKVA------------ 193 (325)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTT--------------------T-CSEEEEECSSSSCCS---CHHH------------
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh--------------------c-CCEEEEEeCCCcCCc---chHH------------
Confidence 257999999999999999999986 3 468999998864310 0000
Q ss_pred EcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecC
Q 014990 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKG 316 (415)
Q Consensus 237 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~ 316 (415)
.+.+. ...||+++++..+.++. . ++.+.++++.+.
T Consensus 194 -------------------------~~~l~------------~~~gv~i~~~~~v~~i~--~--~~~v~~v~~~~~---- 228 (325)
T 2q7v_A 194 -------------------------QARAF------------ANPKMKFIWDTAVEEIQ--G--ADSVSGVKLRNL---- 228 (325)
T ss_dssp -------------------------HHHHH------------TCTTEEEECSEEEEEEE--E--SSSEEEEEEEET----
T ss_pred -------------------------HHHHH------------hcCCceEecCCceEEEc--c--CCcEEEEEEEEC----
Confidence 01111 03589999999999987 4 556666766531
Q ss_pred CCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccc
Q 014990 317 GGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGI 396 (415)
Q Consensus 317 ~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~ 396 (415)
.+|+..+++||.||+|+|++|+. ++.... +.++++|++.+|++ ++|+.|||||+|||+..+...
T Consensus 229 ---------~~g~~~~i~~D~vi~a~G~~p~~----~~l~~~-~~~~~~g~i~vd~~--~~t~~~~vya~GD~~~~~~~~ 292 (325)
T 2q7v_A 229 ---------KTGEVSELATDGVFIFIGHVPNT----AFVKDT-VSLRDDGYVDVRDE--IYTNIPMLFAAGDVSDYIYRQ 292 (325)
T ss_dssp ---------TTCCEEEEECSEEEECSCEEESC----GGGTTT-SCBCTTSCBCCBTT--TBCSSTTEEECSTTTCSSCCC
T ss_pred ---------CCCcEEEEEcCEEEEccCCCCCh----HHHhhh-cccCCCccEecCCC--CccCCCCEEEeecccCccHHH
Confidence 14555689999999999999975 343444 56677899999987 789999999999998764445
Q ss_pred hhhhhhhHHHHHhhccc
Q 014990 397 IATNLYCAEETVSSLSL 413 (415)
Q Consensus 397 ~~~a~~~g~~~a~~i~~ 413 (415)
...|+.||+.||.+|.+
T Consensus 293 ~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 293 LATSVGAGTRAAMMTER 309 (325)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66899999999999875
No 10
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.8e-32 Score=262.04 Aligned_cols=280 Identities=16% Similarity=0.205 Sum_probs=199.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC--C--CC--CCcchHHHHHHHHHHhhccCeEEEece
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG--V--AP--DHPETKIVINQFSRVVQHERCSFFGNV 93 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~--~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
++|+||||||||+++|..|++.+ .+|+|||+. .||.+... . .+ .+....++..++.+.+++.+++++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 77 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKG--IRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQ 77 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--CCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccC
Confidence 68999999999999999999998 999999863 55554321 1 01 122345677778888888899998885
Q ss_pred Eec-----------eEEEeccc-ccccCEEEEccCCCCCCCCCCCCCC---CCCeeechhhHHHhcCCCCCCCCCCCCCC
Q 014990 94 TLG-----------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGED---LIGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (415)
Q Consensus 94 ~v~-----------~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (415)
.+. ..+..+++ ...||+||+|||+ .++.|++||.+ ...+++... .. .. ...
T Consensus 78 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~-~~~~~~~~g~~~~~~~~~~~~~~-~~---~~---------~~~ 143 (310)
T 1fl2_A 78 SASKLIPAAVEGGLHQIETASGAVLKARSIIVATGA-KWRNMNVPGEDQYRTKGVTYCPH-CD---GP---------LFK 143 (310)
T ss_dssp CEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCE-EECCCCCTTTTTTBTTTEESCHH-HH---GG---------GGB
T ss_pred EEEEEEecccCCceEEEEECCCCEEEeCEEEECcCC-CcCCCCCCChhhcccceeEEecc-Cc---Hh---------hcC
Confidence 431 23344444 3579999999999 57777888875 223433221 11 00 125
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIR 238 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~ 238 (415)
+++|+|||+|.+|+|+|..|.+ ...+|+++.|++.+. ..+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~---------------------~g~~Vtlv~~~~~~~---~~~~--------------- 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAG---------------------IVEHVTLLEFAPEMK---ADQV--------------- 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------TBSEEEEECSSSSCC---SCHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------hCCEEEEEEeCcccC---ccHH---------------
Confidence 8999999999999999999986 346899999886431 0010
Q ss_pred ccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCC
Q 014990 239 EDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGG 318 (415)
Q Consensus 239 ~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~ 318 (415)
+.+.+. ...||+++++..+.++. . +++.+..+++.+.
T Consensus 185 ----------------------~~~~l~------------~~~gv~v~~~~~v~~i~--~-~~~~v~~v~~~~~------ 221 (310)
T 1fl2_A 185 ----------------------LQDKLR------------SLKNVDIILNAQTTEVK--G-DGSKVVGLEYRDR------ 221 (310)
T ss_dssp ----------------------HHHHHH------------TCTTEEEESSEEEEEEE--E-SSSSEEEEEEEET------
T ss_pred ----------------------HHHHHh------------hCCCeEEecCCceEEEE--c-CCCcEEEEEEEEC------
Confidence 111111 02589999999999987 4 3456666766541
Q ss_pred CCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchh
Q 014990 319 PGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIA 398 (415)
Q Consensus 319 ~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~ 398 (415)
.+|+..++++|.||+|+|++|+. ++... .+.++++|++.+|+. ++|+.|||||+|||+..+.....
T Consensus 222 -------~~g~~~~i~~D~vi~a~G~~p~~----~~l~~-~l~~~~~g~i~vd~~--~~t~~~~vya~GD~~~~~~~~~~ 287 (310)
T 1fl2_A 222 -------VSGDIHNIELAGIFVQIGLLPNT----NWLEG-AVERNRMGEIIIDAK--CETNVKGVFAAGDCTTVPYKQII 287 (310)
T ss_dssp -------TTCCEEEEECSEEEECSCEEESC----GGGTT-TSCBCTTSCBCCCTT--CBCSSTTEEECSTTBSCSSCCHH
T ss_pred -------CCCcEEEEEcCEEEEeeCCccCc----hHHhc-cccccCCCcEEcCCC--CccCCCCEEEeecccCCcchhhh
Confidence 13555689999999999999975 23333 266777899999987 78999999999999976654555
Q ss_pred hhhhhHHHHHhhccc
Q 014990 399 TNLYCAEETVSSLSL 413 (415)
Q Consensus 399 ~a~~~g~~~a~~i~~ 413 (415)
.|+.||+.||.+|.+
T Consensus 288 ~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 288 IATGEGAKASLSAFD 302 (310)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHhhHHHHHHHHHH
Confidence 799999999999875
No 11
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.3e-32 Score=264.53 Aligned_cols=284 Identities=18% Similarity=0.221 Sum_probs=201.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC----CCCC--cchHHHHHHHHHHhhccCeEEEe
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV----APDH--PETKIVINQFSRVVQHERCSFFG 91 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 91 (415)
..++|+|||||+||+++|..|++.+ .+|+|||+. .+||.+.... .|.+ ....++...+.+.+++.+++++.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 91 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSG--FSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG 91 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCC--CcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE
Confidence 3578999999999999999999999 999999994 4565543211 1221 22345667777778888888876
Q ss_pred ceEece-------EEEecccccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCCCCCCe
Q 014990 92 NVTLGS-------SVSLSELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDT 161 (415)
Q Consensus 92 ~~~v~~-------~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 161 (415)
...... .+..+.....||+||+|||+ .++.|++||.+. .+++.... .... ...+++
T Consensus 92 ~~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~-~~~~~~i~g~~~~~~~~~~~~~~-~~~~------------~~~~~~ 157 (319)
T 3cty_A 92 VEVRSIKKTQGGFDIETNDDTYHAKYVIITTGT-THKHLGVKGESEYFGKGTSYCST-CDGY------------LFKGKR 157 (319)
T ss_dssp CCEEEEEEETTEEEEEESSSEEEEEEEEECCCE-EECCCCCBTTTTTBTTTEESCHH-HHGG------------GGBTSE
T ss_pred eeEEEEEEeCCEEEEEECCCEEEeCEEEECCCC-CcccCCCCChHHhCCceEEEEEe-cchh------------hcCCCe
Confidence 433221 23333334579999999998 677888888652 23333221 1111 125799
Q ss_pred EEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccc
Q 014990 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDD 241 (415)
Q Consensus 162 V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (415)
|+|||+|.+|+|+|..|.+ ...+|+++.|++.+.. .+.
T Consensus 158 v~viG~G~~g~e~a~~l~~---------------------~g~~V~~i~~~~~~~~---~~~------------------ 195 (319)
T 3cty_A 158 VVTIGGGNSGAIAAISMSE---------------------YVKNVTIIEYMPKYMC---ENA------------------ 195 (319)
T ss_dssp EEEECCSHHHHHHHHHHTT---------------------TBSEEEEECSSSSCCS---CHH------------------
T ss_pred EEEECCCHHHHHHHHHHHh---------------------hCCcEEEEEcCCccCC---CHH------------------
Confidence 9999999999999999986 3468999998764310 000
Q ss_pred cCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCc
Q 014990 242 LIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGK 321 (415)
Q Consensus 242 ~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~ 321 (415)
+.+.+. +.||+++++..+.++. . +++.+.++.+.+.
T Consensus 196 -------------------l~~~l~-------------~~gv~i~~~~~v~~i~--~-~~~~v~~v~~~~~--------- 231 (319)
T 3cty_A 196 -------------------YVQEIK-------------KRNIPYIMNAQVTEIV--G-DGKKVTGVKYKDR--------- 231 (319)
T ss_dssp -------------------HHHHHH-------------HTTCCEECSEEEEEEE--E-SSSSEEEEEEEET---------
T ss_pred -------------------HHHHHh-------------cCCcEEEcCCeEEEEe--c-CCceEEEEEEEEc---------
Confidence 111111 4579999999998887 4 3344666666431
Q ss_pred ceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhh
Q 014990 322 QYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNL 401 (415)
Q Consensus 322 ~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~ 401 (415)
.+|+..++++|.||+|+|++|+. ++....++.++++|++.+|+. ++|+.|||||+|||+..+......|+
T Consensus 232 ----~~g~~~~i~~D~vi~a~G~~p~~----~~l~~~gl~~~~~g~i~vd~~--~~t~~~~vya~GD~~~~~~~~~~~A~ 301 (319)
T 3cty_A 232 ----TTGEEKLIETDGVFIYVGLIPQT----SFLKDSGVKLDERGYIVVDSR--QRTSVPGVYAAGDVTSGNFAQIASAV 301 (319)
T ss_dssp ----TTCCEEEECCSEEEECCCEEECC----GGGTTSCCCBCTTSCBCCCTT--CBCSSTTEEECSTTBTTCCCCHHHHH
T ss_pred ----CCCceEEEecCEEEEeeCCccCh----HHHhhccccccCCccEeCCCC--CccCCCCEEEeecccCcchhhHHHHH
Confidence 13555589999999999999975 355566788888899999987 78999999999999876545566899
Q ss_pred hhHHHHHhhcccc
Q 014990 402 YCAEETVSSLSLI 414 (415)
Q Consensus 402 ~~g~~~a~~i~~~ 414 (415)
.||+.||.+|.+.
T Consensus 302 ~~g~~aa~~i~~~ 314 (319)
T 3cty_A 302 GDGCKAALSLYSD 314 (319)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998753
No 12
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=2.5e-32 Score=261.87 Aligned_cols=281 Identities=21% Similarity=0.253 Sum_probs=204.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC----CCCCc--chHHHHHHHHHHhhccCeEEEec
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV----APDHP--ETKIVINQFSRVVQHERCSFFGN 92 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 92 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+. +||.+.+.. .|.+. ...++..++.+.+++.+++++..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYM--LKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD 90 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEES
T ss_pred ccCEEEECccHHHHHHHHHHHHCC--CcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 579999999999999999999999 999999998 777665321 13322 34577788888888888888774
Q ss_pred eEece-------EEEecc-cccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCCCCCCe
Q 014990 93 VTLGS-------SVSLSE-LRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDT 161 (415)
Q Consensus 93 ~~v~~-------~v~~~~-~~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 161 (415)
..... .+...+ ....||+||+|||+ .++.|++||.+. .++.+. .+.... ...+++
T Consensus 91 ~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~-~~~~~~i~g~~~~~~~~~~~~-~~~~~~------------~~~~~~ 156 (323)
T 3f8d_A 91 IVEKIENRGDEFVVKTKRKGEFKADSVILGIGV-KRRKLGVPGEQEFAGRGISYC-SVADAP------------LFKNRV 156 (323)
T ss_dssp CEEEEEEC--CEEEEESSSCEEEEEEEEECCCC-EECCCCCTTTTTTBTTTEESC-HHHHGG------------GGTTCE
T ss_pred EEEEEEecCCEEEEEECCCCEEEcCEEEECcCC-CCccCCCCchhhhcCCceEEe-ccCCHh------------HcCCCE
Confidence 33221 233334 23579999999999 588888998763 444432 222111 125799
Q ss_pred EEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccc
Q 014990 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDD 241 (415)
Q Consensus 162 V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (415)
|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+.. .++
T Consensus 157 v~vvG~G~~~~e~a~~l~~--------------------~-g~~v~~~~~~~~~~~---~~~------------------ 194 (323)
T 3f8d_A 157 VAVIGGGDSALEGAEILSS--------------------Y-STKVYLIHRRDTFKA---QPI------------------ 194 (323)
T ss_dssp EEEECCSHHHHHHHHHHHH--------------------H-SSEEEEECSSSSCCS---CHH------------------
T ss_pred EEEECCCHHHHHHHHHHHH--------------------h-CCeEEEEEeCCCCCc---CHH------------------
Confidence 9999999999999999986 2 358999998865321 000
Q ss_pred cCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCc
Q 014990 242 LIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGK 321 (415)
Q Consensus 242 ~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~ 321 (415)
..+.+. ...||+++++..+.++. . ++.+..+++.+.
T Consensus 195 -------------------~~~~~~------------~~~gv~~~~~~~v~~i~--~--~~~~~~v~~~~~--------- 230 (323)
T 3f8d_A 195 -------------------YVETVK------------KKPNVEFVLNSVVKEIK--G--DKVVKQVVVENL--------- 230 (323)
T ss_dssp -------------------HHHHHH------------TCTTEEEECSEEEEEEE--E--SSSEEEEEEEET---------
T ss_pred -------------------HHHHHH------------hCCCcEEEeCCEEEEEe--c--cCceeEEEEEEC---------
Confidence 011111 14489999999999987 4 466666766542
Q ss_pred ceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccC--Cccchhh
Q 014990 322 QYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRG--PTGIIAT 399 (415)
Q Consensus 322 ~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~--~~~~~~~ 399 (415)
.+|+..++++|.||+|+|++|+. ++....++.++++|++.+|++ ++|+.|||||+|||+.. .......
T Consensus 231 ----~~g~~~~~~~D~vv~a~G~~p~~----~~~~~~g~~~~~~g~i~vd~~--~~t~~~~vya~GD~~~~~~~~~~~~~ 300 (323)
T 3f8d_A 231 ----KTGEIKELNVNGVFIEIGFDPPT----DFAKSNGIETDTNGYIKVDEW--MRTSVPGVFAAGDCTSAWLGFRQVIT 300 (323)
T ss_dssp ----TTCCEEEEECSEEEECCCEECCH----HHHHHTTCCBCTTSSBCCCTT--CBCSSTTEEECSTTBSTTTTCCCHHH
T ss_pred ----CCCceEEEEcCEEEEEECCCCCh----hHHhhcCeeecCCCcEecCCC--ceecCCCEEEcceecCCCCcccceee
Confidence 14565689999999999999974 355566778888999999986 88999999999999875 2445558
Q ss_pred hhhhHHHHHhhccc
Q 014990 400 NLYCAEETVSSLSL 413 (415)
Q Consensus 400 a~~~g~~~a~~i~~ 413 (415)
|+.||+.||.+|.+
T Consensus 301 A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 301 AVAQGAVAATSAYR 314 (323)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHH
Confidence 99999999999865
No 13
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.9e-32 Score=260.84 Aligned_cols=282 Identities=17% Similarity=0.199 Sum_probs=199.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCCCCCccccC----CCCCC---cchHHHHHHHHHHhhccCeEEEe
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSFFG 91 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~~gg~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 91 (415)
++|+|||||+||+++|..|++.+ . +|+|||+. .+||.+.+. ..|.+ ....++..++.+.+++.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGG--VKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC
T ss_pred ceEEEECccHHHHHHHHHHHHCC--CCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE
Confidence 68999999999999999999998 8 99999995 456654321 11222 23456777788888888888876
Q ss_pred ceEece-------EEEeccc-ccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCCCCCC
Q 014990 92 NVTLGS-------SVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 92 ~~~v~~-------~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k 160 (415)
...... .+...+. ...||+||+|||+ .++.|++||.+. +.+++... .... ...++
T Consensus 79 ~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~------------~~~~~ 144 (311)
T 2q0l_A 79 TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG-SPKRTGIKGESEYWGKGVSTCAT-CDGF------------FYKNK 144 (311)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE-EECCCCCBTHHHHBTTTEESCHH-HHGG------------GGTTS
T ss_pred EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC-CCCCCCCCChhhccCCcEEEeec-CChh------------hcCCC
Confidence 433221 2323332 3579999999998 677888888641 33443321 2111 12579
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEccc
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRED 240 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (415)
+|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+. +. ++
T Consensus 145 ~v~VvG~G~~g~e~A~~l~~--------------------~-g~~Vtlv~~~~~~~--~~-~~----------------- 183 (311)
T 2q0l_A 145 EVAVLGGGDTAVEEAIYLAN--------------------I-CKKVYLIHRRDGFR--CA-PI----------------- 183 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHT--------------------T-SSEEEEECSSSSCC--SC-HH-----------------
T ss_pred EEEEECCCHHHHHHHHHHHh--------------------c-CCEEEEEeeCCccC--CC-HH-----------------
Confidence 99999999999999999986 3 36899999886431 11 10
Q ss_pred ccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCC
Q 014990 241 DLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPG 320 (415)
Q Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g 320 (415)
..+.+. ...||+++++..+.++. . +++.+..+++...
T Consensus 184 --------------------~~~~l~------------~~~gv~v~~~~~v~~i~--~-~~~~v~~v~~~~~-------- 220 (311)
T 2q0l_A 184 --------------------TLEHAK------------NNDKIEFLTPYVVEEIK--G-DASGVSSLSIKNT-------- 220 (311)
T ss_dssp --------------------HHHHHH------------TCTTEEEETTEEEEEEE--E-ETTEEEEEEEEET--------
T ss_pred --------------------HHHHHh------------hCCCeEEEeCCEEEEEE--C-CCCcEeEEEEEec--------
Confidence 011111 03589999999998886 4 2355555665431
Q ss_pred cceeccCCceEEEecCeeEEeeccCCccCCCCcccCCC----CccccCCCceeeccCCCCCcccCCeeeeeccccCCccc
Q 014990 321 KQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHK----GIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGI 396 (415)
Q Consensus 321 ~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~----g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~ 396 (415)
.+|+..+++||.||+|+|++|+. ++.... ++.++++|++.+|++ ++|+.|||||+|||+..+...
T Consensus 221 -----~~g~~~~i~~D~vi~a~G~~p~~----~~l~~~g~~~~l~~~~~g~i~vd~~--~~t~~~~vya~GD~~~~~~~~ 289 (311)
T 2q0l_A 221 -----ATNEKRELVVPGFFIFVGYDVNN----AVLKQEDNSMLCKCDEYGSIVVDFS--MKTNVQGLFAAGDIRIFAPKQ 289 (311)
T ss_dssp -----TTCCEEEEECSEEEECSCEEECC----GGGBCTTSCBSSCBCTTSCBCCCTT--CBCSSTTEEECSTTBTTCCCC
T ss_pred -----CCCceEEEecCEEEEEecCccCh----hhhhcccccceeEeccCCCEEeCCc--cccCCCCeEEcccccCcchHH
Confidence 13555589999999999999975 344444 377788899999986 889999999999998764445
Q ss_pred hhhhhhhHHHHHhhccc
Q 014990 397 IATNLYCAEETVSSLSL 413 (415)
Q Consensus 397 ~~~a~~~g~~~a~~i~~ 413 (415)
...|+.||+.||.+|.+
T Consensus 290 ~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 290 VVCAASDGATAALSVIS 306 (311)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHH
Confidence 66899999999999875
No 14
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.8e-32 Score=262.66 Aligned_cols=282 Identities=18% Similarity=0.230 Sum_probs=205.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC-------CCCCc--chHHHHHHHHHHhhccCeE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------APDHP--ETKIVINQFSRVVQHERCS 88 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~ 88 (415)
..++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.+.. .+.+. ...++..++.+.+++.+++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQ--ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQT 83 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCC--CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCc
Confidence 3578999999999999999999998 99999999999887764211 13332 3567788888888888999
Q ss_pred EEeceEece---------EEEecccccccCEEEEccCCC--CCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCC
Q 014990 89 FFGNVTLGS---------SVSLSELRQLYHVVVLAYGAE--SDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSP 154 (415)
Q Consensus 89 ~~~~~~v~~---------~v~~~~~~~~~d~lvlAtG~~--~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~ 154 (415)
++.++.+.. .+...++...||+||+|||+. .|+.|++||.+. ..+++ .+.. .
T Consensus 84 ~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~--~~~~----~-------- 149 (332)
T 3lzw_A 84 ICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY--FVDD----L-------- 149 (332)
T ss_dssp EECSCCEEEEEECTTSCEEEEESSEEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES--SCSC----G--------
T ss_pred EEccCEEEEEEECCCCcEEEEECCCEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE--ecCC----H--------
Confidence 887765522 344444446799999999983 477778888752 22222 1110 0
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCee
Q 014990 155 DLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLY 234 (415)
Q Consensus 155 ~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~ 234 (415)
....+++|+|||+|.+|+|+|..|.+ ...+|+++.|++.+.
T Consensus 150 ~~~~~~~v~vvG~g~~~~e~a~~l~~---------------------~~~~v~~~~~~~~~~------------------ 190 (332)
T 3lzw_A 150 QKFAGRRVAILGGGDSAVDWALMLEP---------------------IAKEVSIIHRRDKFR------------------ 190 (332)
T ss_dssp GGGBTCEEEEECSSHHHHHHHHHHTT---------------------TBSEEEEECSSSSCS------------------
T ss_pred HHcCCCEEEEECCCHhHHHHHHHHHh---------------------hCCeEEEEEecCcCC------------------
Confidence 01158999999999999999999986 345899999886431
Q ss_pred EEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeee
Q 014990 235 VHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTAL 314 (415)
Q Consensus 235 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~ 314 (415)
..... .+.+. +.||+++++..+.++. . ++.+..+++.+.
T Consensus 191 ------------~~~~~----------~~~l~-------------~~gv~~~~~~~v~~i~--~--~~~~~~v~~~~~-- 229 (332)
T 3lzw_A 191 ------------AHEHS----------VENLH-------------ASKVNVLTPFVPAELI--G--EDKIEQLVLEEV-- 229 (332)
T ss_dssp ------------SCHHH----------HHHHH-------------HSSCEEETTEEEEEEE--C--SSSCCEEEEEET--
T ss_pred ------------ccHHH----------HHHHh-------------cCCeEEEeCceeeEEe--c--CCceEEEEEEec--
Confidence 10000 01111 5689999999999987 4 333556766542
Q ss_pred cCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeecccc--C
Q 014990 315 KGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKR--G 392 (415)
Q Consensus 315 ~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~--~ 392 (415)
.+++++++++|.||+|+|++|+. ++....++.. ++|++.+|++ ++|+.|||||+|||+. +
T Consensus 230 -----------~~g~~~~~~~D~vv~a~G~~p~~----~~~~~~~~~~-~~g~i~vd~~--~~t~~~~vya~GD~~~~~~ 291 (332)
T 3lzw_A 230 -----------KGDRKEILEIDDLIVNYGFVSSL----GPIKNWGLDI-EKNSIVVKST--METNIEGFFAAGDICTYEG 291 (332)
T ss_dssp -----------TSCCEEEEECSEEEECCCEECCC----GGGGGSSCCE-ETTEEECCTT--SBCSSTTEEECGGGEECTT
T ss_pred -----------CCCceEEEECCEEEEeeccCCCc----hHHhhcCccc-cCCeEEeCCC--CceecCCEEEccceecCCC
Confidence 14566789999999999999965 3555667766 6799999986 8899999999999984 2
Q ss_pred CccchhhhhhhHHHHHhhccc
Q 014990 393 PTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 393 ~~~~~~~a~~~g~~~a~~i~~ 413 (415)
.......|+.||+.||.+|.+
T Consensus 292 ~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 292 KVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp CCCCHHHHHHHHHHHHHHHHH
T ss_pred CcceEeeehhhHHHHHHHHHH
Confidence 344455899999999999865
No 15
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=7.4e-32 Score=260.47 Aligned_cols=287 Identities=18% Similarity=0.253 Sum_probs=202.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcC----CCCCCCccccC----CCCCC---cchHHHHHHHHHHhhccC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR----LPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHER 86 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~----~~~~gg~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~ 86 (415)
..++|+|||||+||+++|..|++.+ .+|+|||+ ....|+.+.+. ..|.+ ....++...+.+.++..+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 84 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAE--LKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFG 84 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCC
Confidence 3578999999999999999999998 99999998 45566654332 11222 234466777777788888
Q ss_pred eEEEeceEece-------EEEecccccccCEEEEccCCCCCCCCCCCCCCC-------CCeeechhhHHHhcCCCCCCCC
Q 014990 87 CSFFGNVTLGS-------SVSLSELRQLYHVVVLAYGAESDRALGIPGEDL-------IGVHSAREFVWWYNGHPDGKNL 152 (415)
Q Consensus 87 ~~~~~~~~v~~-------~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~-------~~v~~~~~~~~~~~~~~~~~~~ 152 (415)
++++.+..... .+..+.....||+||+|||+ .++.|++||.+. ..+++. .... ...
T Consensus 85 v~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~-~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~---~~~----- 154 (333)
T 1vdc_A 85 TTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGA-VAKRLSFVGSGEVLGGFWNRGISAC-AVCD---GAA----- 154 (333)
T ss_dssp CEEECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCE-EECCCCCBTCSSSSSCCBTTTEESC-HHHH---TTS-----
T ss_pred CEEEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCC-CcCCCCCCCccccccccccCcEEEe-ccCc---cch-----
Confidence 99887763221 23332234579999999999 577778888753 222222 1111 110
Q ss_pred CCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCC
Q 014990 153 SPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKN 232 (415)
Q Consensus 153 ~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~ 232 (415)
....+++|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+.. .+.+
T Consensus 155 --~~~~~~~v~VvG~G~~g~e~A~~l~~--------------------~-g~~V~lv~~~~~~~~---~~~~-------- 200 (333)
T 1vdc_A 155 --PIFRNKPLAVIGGGDSAMEEANFLTK--------------------Y-GSKVYIIHRRDAFRA---SKIM-------- 200 (333)
T ss_dssp --GGGTTSEEEEECCSHHHHHHHHHHTT--------------------T-SSEEEEECSSSSCCS---CHHH--------
T ss_pred --hhcCCCeEEEECCChHHHHHHHHHHh--------------------c-CCeEEEEecCCcCCc---cHHH--------
Confidence 01368999999999999999999986 3 358999998864310 0000
Q ss_pred eeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCC--CeeeEEEe
Q 014990 233 LYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSG--HVSGVHFE 310 (415)
Q Consensus 233 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~--~v~~v~~~ 310 (415)
. .+++ .+.||+++++..+.++. . +++ .+..+.+.
T Consensus 201 -------------------------~---~~~~-------------~~~gv~i~~~~~v~~i~--~-~~~~~~v~~v~~~ 236 (333)
T 1vdc_A 201 -------------------------Q---QRAL-------------SNPKIDVIWNSSVVEAY--G-DGERDVLGGLKVK 236 (333)
T ss_dssp -------------------------H---HHHH-------------TCTTEEEECSEEEEEEE--E-SSSSSSEEEEEEE
T ss_pred -------------------------H---HHHH-------------hCCCeeEecCCceEEEe--C-CCCccceeeEEEE
Confidence 0 0111 15689999999999987 4 222 56667665
Q ss_pred eeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccc
Q 014990 311 KTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLK 390 (415)
Q Consensus 311 ~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~ 390 (415)
+. .+|+.++++||.||||+|++|+. ++.. .++.++++|++.+|+.+ ++|+.|||||+|||+
T Consensus 237 ~~-------------~~g~~~~i~~D~vi~a~G~~p~~----~~~~-~~l~~~~~G~i~vd~~~-~~t~~~~vya~GD~~ 297 (333)
T 1vdc_A 237 NV-------------VTGDVSDLKVSGLFFAIGHEPAT----KFLD-GGVELDSDGYVVTKPGT-TQTSVPGVFAAGDVQ 297 (333)
T ss_dssp ET-------------TTCCEEEEECSEEEECSCEEESC----GGGT-TSSCBCTTSCBCCCTTS-CBCSSTTEEECGGGG
T ss_pred ec-------------CCCceEEEecCEEEEEeCCccch----HHhh-ccccccCCCCEEechhh-cccCCCCEEEeeecc
Confidence 31 13555689999999999999976 3333 35677778999999875 789999999999998
Q ss_pred cCCccchhhhhhhHHHHHhhccc
Q 014990 391 RGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 391 ~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
..+......|+.||+.||.+|.+
T Consensus 298 ~~~~~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 298 DKKYRQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHhHHHHHHHHHH
Confidence 76544555799999999999875
No 16
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-32 Score=263.37 Aligned_cols=285 Identities=20% Similarity=0.196 Sum_probs=202.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC----CCCCC---cchHHHHHHHHHHhhccCeEE
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSF 89 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~ 89 (415)
+..++|+|||||+||+++|..|++.+ .+|+|||+. .+||.+.+. ..|.+ ....++..++.+.+++.++++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~ 88 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQ--LAPLVFEGT-SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADL 88 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTT--CCCEEECCS-SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEecC-CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 45689999999999999999999998 999999975 566654432 11222 234566777777788888998
Q ss_pred EeceEece------EE-Eeccc-ccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCCCC
Q 014990 90 FGNVTLGS------SV-SLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (415)
Q Consensus 90 ~~~~~v~~------~v-~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (415)
+.+..... .+ ...+. ...||+||+|||+ .++.|++||.+. ..+++... .... +..
T Consensus 89 ~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~-~~~~~~i~g~~~~~~~~~~~~~~-~~~~------------~~~ 154 (335)
T 2a87_A 89 RMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGA-AARYLQVPGEQELLGRGVSSCAT-CDGF------------FFR 154 (335)
T ss_dssp ECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCE-EECCCCCTHHHHTBTTTEESCHH-HHGG------------GGT
T ss_pred EEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCC-CccCCCCCchHhccCCceEEeec-cchh------------hcC
Confidence 88764322 13 33333 3579999999999 677778887541 23333221 1111 125
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIR 238 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~ 238 (415)
+++|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+..
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~--------------------~-g~~V~l~~~~~~~~~--------------------- 192 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTR--------------------F-ARSVTLVHRRDEFRA--------------------- 192 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT--------------------T-CSEEEEECSSSSCSS---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHH--------------------h-CCeEEEEEcCCcCCc---------------------
Confidence 8999999999999999999986 3 468999998864310
Q ss_pred ccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCC
Q 014990 239 EDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGG 318 (415)
Q Consensus 239 ~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~ 318 (415)
. ..+.. +++. +.||+++++..+.++. . ++.+..+.+.+.
T Consensus 193 --------~-------~~~~~---~~~~-------------~~gV~v~~~~~v~~i~--~--~~~~~~v~~~~~------ 231 (335)
T 2a87_A 193 --------S-------KIMLD---RARN-------------NDKIRFLTNHTVVAVD--G--DTTVTGLRVRDT------ 231 (335)
T ss_dssp --------C-------TTHHH---HHHH-------------CTTEEEECSEEEEEEE--C--SSSCCEEEEEEE------
T ss_pred --------c-------HHHHH---HHhc-------------cCCcEEEeCceeEEEe--c--CCcEeEEEEEEc------
Confidence 0 00000 1111 5689999999999987 4 445556666532
Q ss_pred CCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchh
Q 014990 319 PGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIA 398 (415)
Q Consensus 319 ~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~ 398 (415)
.+|+.++++||.||||+|++|+. ++.. .++.++++|++.+|+.+ ++|+.|||||+|||+..+.....
T Consensus 232 -------~~g~~~~i~~D~vi~a~G~~p~~----~~~~-~~l~~~~~G~i~vd~~~-~~t~~~~iya~GD~~~~~~~~~~ 298 (335)
T 2a87_A 232 -------NTGAETTLPVTGVFVAIGHEPRS----GLVR-EAIDVDPDGYVLVQGRT-TSTSLPGVFAAGDLVDRTYRQAV 298 (335)
T ss_dssp -------TTSCCEEECCSCEEECSCEEECC----TTTB-TTBCBCTTSCBCCSTTS-SBCSSTTEEECGGGTCCSCCCHH
T ss_pred -------CCCceEEeecCEEEEccCCccCh----hHhh-cccccCCCccEEeCCCC-CccCCCCEEEeeecCCccHHHHH
Confidence 13445689999999999999975 2323 46777888999999865 78999999999999875444455
Q ss_pred hhhhhHHHHHhhcccc
Q 014990 399 TNLYCAEETVSSLSLI 414 (415)
Q Consensus 399 ~a~~~g~~~a~~i~~~ 414 (415)
.|+.+|+.||.+|.+.
T Consensus 299 ~A~~~g~~aA~~i~~~ 314 (335)
T 2a87_A 299 TAAGSGCAAAIDAERW 314 (335)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHH
Confidence 7999999999998753
No 17
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=5.2e-32 Score=259.93 Aligned_cols=288 Identities=17% Similarity=0.198 Sum_probs=201.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC----CCCCC---cchHHHHHHHHHHhhccCeEEE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSFF 90 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
..++|+|||||+||+++|..|++.+ .+|+|||+. .+||.+.+. ..|.+ ....++..++.+.++..+++++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARAN--LQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEII 80 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTT--CCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC--CcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4578999999999999999999998 999999975 566654332 11222 2345667777778888889988
Q ss_pred eceEeceE-----EE-ecc-cccccCEEEEccCCCCCCCCCCCCCC---CCCeeechhhHHHhcCCCCCCCCCCCCCCCC
Q 014990 91 GNVTLGSS-----VS-LSE-LRQLYHVVVLAYGAESDRALGIPGED---LIGVHSAREFVWWYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 91 ~~~~v~~~-----v~-~~~-~~~~~d~lvlAtG~~~~~~~~i~g~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k 160 (415)
.+.....+ ++ ..+ ....||+||+|||+ .+..|++||.+ ...+++... .... +..++
T Consensus 81 ~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~------------~~~~~ 146 (320)
T 1trb_A 81 FDHINKVDLQNRPFRLNGDNGEYTCDALIIATGA-SARYLGLPSEEAFKGRGVSACAT-SDGF------------FYRNQ 146 (320)
T ss_dssp CCCEEEEECSSSSEEEEESSCEEEEEEEEECCCE-EECCCCCHHHHHTBTTTEESCHH-HHGG------------GGTTS
T ss_pred EeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCC-CcCCCCCCChHHhCCceeEeccc-CCcc------------ccCCC
Confidence 87643221 11 222 23579999999999 57777888754 123333221 1111 12579
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEccc
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRED 240 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (415)
+|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+.. .
T Consensus 147 ~v~ViG~G~~g~e~A~~l~~--------------------~-g~~Vtlv~~~~~~~~---~------------------- 183 (320)
T 1trb_A 147 KVAVIGGGNTAVEEALYLSN--------------------I-ASEVHLIHRRDGFRA---E------------------- 183 (320)
T ss_dssp EEEEECSSHHHHHHHHHHTT--------------------T-SSEEEEECSSSSCCC---C-------------------
T ss_pred eEEEECCCHHHHHHHHHHHh--------------------c-CCeEEEEEeCCcccc---C-------------------
Confidence 99999999999999999986 3 358999998864310 0
Q ss_pred ccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCC
Q 014990 241 DLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPG 320 (415)
Q Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g 320 (415)
+.+..++.+.+. +.||+++++..+.++. . +++.+.++++.+..
T Consensus 184 --------------~~~~~~l~~~l~-------------~~gv~i~~~~~v~~i~--~-~~~~v~~v~~~~~~------- 226 (320)
T 1trb_A 184 --------------KILIKRLMDKVE-------------NGNIILHTNRTLEEVT--G-DQMGVTGVRLRDTQ------- 226 (320)
T ss_dssp --------------HHHHHHHHHHHH-------------TSSEEEECSCEEEEEE--E-CSSSEEEEEEECCT-------
T ss_pred --------------HHHHHHHHHhcc-------------cCCeEEEcCceeEEEE--c-CCCceEEEEEEecc-------
Confidence 111122222222 6789999999999987 4 34466667664310
Q ss_pred cceeccC-CceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCC---CCCcccCCeeeeeccccCCccc
Q 014990 321 KQYAVGT-GEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISG---DSSQVENGLYVCGWLKRGPTGI 396 (415)
Q Consensus 321 ~~~~~~~-g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~---~~~t~~p~vfaiGD~~~~~~~~ 396 (415)
+ |+.++++||.||+|+|++|+. ++.. .++.++ +|++.+|+.+ .++|++|||||+|||+..+...
T Consensus 227 ------~~g~~~~i~~D~vv~a~G~~p~~----~~~~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~ 294 (320)
T 1trb_A 227 ------NSDNIESLDVAGLFVAIGHSPNT----AIFE-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQ 294 (320)
T ss_dssp ------TCCCCEEEECSEEEECSCEEESC----GGGT-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCC
T ss_pred ------CCCceEEEEcCEEEEEeCCCCCh----HHhc-cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchh
Confidence 2 445689999999999999975 3333 356677 8999999862 1389999999999998765445
Q ss_pred hhhhhhhHHHHHhhcccc
Q 014990 397 IATNLYCAEETVSSLSLI 414 (415)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~ 414 (415)
...|+.||+.||.+|.+.
T Consensus 295 ~~~A~~~g~~aa~~i~~~ 312 (320)
T 1trb_A 295 AITSAGTGCMAALDAERY 312 (320)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccHHHHHHHHHHH
Confidence 557999999999998753
No 18
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.8e-32 Score=273.32 Aligned_cols=289 Identities=13% Similarity=0.158 Sum_probs=194.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc---cCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR---SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
++|+|||||+||+++|.+|++.+++.+|+|||+++.+|.... +..........++.....+.+.+.+++++.+..+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 689999999999999999999955599999999987762211 00101111111221113344556788887776552
Q ss_pred e------EEEe----cccccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEc
Q 014990 97 S------SVSL----SELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILG 166 (415)
Q Consensus 97 ~------~v~~----~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG 166 (415)
. .+.+ +.....||+||+|||+ .|+.|++||.+.+++++...+..... .......+++++|||
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~-~p~~p~i~g~~~~~v~~~~~~~~~~~-------~~~~~~~~~~vvViG 154 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGA-SQFSTQIRGSQTEKLLKYKFLSGALA-------AVPLLENSQTVAVIG 154 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCC-CBCCCCCBTTTCTTEEEGGGCC-----------CCHHHHTCSEEEEEC
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCc-ccCCCCCCCCCCCCEEEeCCHHHHHH-------HHHHHhcCCEEEEEC
Confidence 1 2322 1223579999999999 78888999998777776643321100 000112579999999
Q ss_pred CChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCC
Q 014990 167 QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSP 246 (415)
Q Consensus 167 ~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p 246 (415)
+|.+|+|+|..+.+ .+ .+|+++.|++.+.....++++
T Consensus 155 gG~~g~E~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~d~~~---------------------- 191 (452)
T 3oc4_A 155 AGPIGMEAIDFLVK--------------------MK-KTVHVFESLENLLPKYFDKEM---------------------- 191 (452)
T ss_dssp CSHHHHHHHHHHHH--------------------TT-CEEEEEESSSSSSTTTCCHHH----------------------
T ss_pred CCHHHHHHHHHHHh--------------------CC-CeEEEEEccCccccccCCHHH----------------------
Confidence 99999999999986 34 589999998765332222222
Q ss_pred CcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceecc
Q 014990 247 TDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVG 326 (415)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~ 326 (415)
...+.+.+. +.||+++++..+.++. . .++.+ .+.+
T Consensus 192 -----------~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~-~~~~v-~v~~----------------- 226 (452)
T 3oc4_A 192 -----------VAEVQKSLE-------------KQAVIFHFEETVLGIE--E-TANGI-VLET----------------- 226 (452)
T ss_dssp -----------HHHHHHHHH-------------TTTEEEEETCCEEEEE--E-CSSCE-EEEE-----------------
T ss_pred -----------HHHHHHHHH-------------HcCCEEEeCCEEEEEE--c-cCCeE-EEEE-----------------
Confidence 111222222 6789999999999886 3 34444 3332
Q ss_pred CCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCc---------cch
Q 014990 327 TGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPT---------GII 397 (415)
Q Consensus 327 ~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~---------~~~ 397 (415)
.+. +++||.||+|+|++|+. ++... .+.++++|.+.+|++ ++|+.|||||+|||+..+. ...
T Consensus 227 ~~g--~i~aD~Vv~A~G~~p~~----~~l~~-~~~~~~~g~i~vd~~--~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~ 297 (452)
T 3oc4_A 227 SEQ--EISCDSGIFALNLHPQL----AYLDK-KIQRNLDQTIAVDAY--LQTSVPNVFAIGDCISVMNEPVAETFYAPLV 297 (452)
T ss_dssp SSC--EEEESEEEECSCCBCCC----SSCCT-TSCBCTTSCBCCCTT--CBCSSTTEEECGGGBCEEEGGGTEEECCCCH
T ss_pred CCC--EEEeCEEEECcCCCCCh----HHHHh-hhccCCCCCEEECcC--ccCCCCCEEEEEeeEEeccccCCceeecchH
Confidence 122 79999999999999976 23333 367788899999986 8999999999999986431 255
Q ss_pred hhhhhhHHHHHhhccc
Q 014990 398 ATNLYCAEETVSSLSL 413 (415)
Q Consensus 398 ~~a~~~g~~~a~~i~~ 413 (415)
..|+.||+.||.+|..
T Consensus 298 ~~A~~~g~~aa~~i~g 313 (452)
T 3oc4_A 298 NNAVRTGLVVANNLEE 313 (452)
T ss_dssp HHHHHHHHHHTTSSSS
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5799999999999874
No 19
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-31 Score=259.11 Aligned_cols=286 Identities=20% Similarity=0.223 Sum_probs=201.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC-------CCCCc--chHHHHHHHHHHhhccCeE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------APDHP--ETKIVINQFSRVVQHERCS 88 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~ 88 (415)
..++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.... .+.++ ...++..++.+.+...++.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 81 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRG--LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPV 81 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 4579999999999999999999998 99999999988887653211 12222 3456777777888887888
Q ss_pred EEeceEece--------EEEeccc-ccccCEEEEccCCC--CCCCCCCCCCCC-C--CeeechhhHHHhcCCCCCCCCCC
Q 014990 89 FFGNVTLGS--------SVSLSEL-RQLYHVVVLAYGAE--SDRALGIPGEDL-I--GVHSAREFVWWYNGHPDGKNLSP 154 (415)
Q Consensus 89 ~~~~~~v~~--------~v~~~~~-~~~~d~lvlAtG~~--~~~~~~i~g~~~-~--~v~~~~~~~~~~~~~~~~~~~~~ 154 (415)
++.++.+.. .+...+. ...||+||+|||+. .|..|+++|.+. . .+++.. ...
T Consensus 82 ~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~------~~~-------- 147 (335)
T 2zbw_A 82 YSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAV------KSK-------- 147 (335)
T ss_dssp EEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSC------SCG--------
T ss_pred EEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEec------Cch--------
Confidence 877765422 2333333 35799999999984 367777888652 1 222211 000
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCee
Q 014990 155 DLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLY 234 (415)
Q Consensus 155 ~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~ 234 (415)
....+++|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+.
T Consensus 148 ~~~~~~~v~viG~G~~g~e~a~~l~~--------------------~-g~~V~~v~~~~~~~------------------ 188 (335)
T 2zbw_A 148 AEFQGKRVLIVGGGDSAVDWALNLLD--------------------T-ARRITLIHRRPQFR------------------ 188 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHTTT--------------------T-SSEEEEECSSSSCC------------------
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHh--------------------h-CCEEEEEEcCCccC------------------
Confidence 01157999999999999999999986 2 35899999986431
Q ss_pred EEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeee
Q 014990 235 VHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTAL 314 (415)
Q Consensus 235 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~ 314 (415)
+. . ....++.+.+. +.||+++++..+.++. . ++.+..+++...
T Consensus 189 -----------~~-~------~~~~~l~~~l~-------------~~gv~v~~~~~v~~i~--~--~~~~~~v~~~~~-- 231 (335)
T 2zbw_A 189 -----------AH-E------ASVKELMKAHE-------------EGRLEVLTPYELRRVE--G--DERVRWAVVFHN-- 231 (335)
T ss_dssp -----------SC-H------HHHHHHHHHHH-------------TTSSEEETTEEEEEEE--E--SSSEEEEEEEET--
T ss_pred -----------cc-H------HHHHHHHhccc-------------cCCeEEecCCcceeEc--c--CCCeeEEEEEEC--
Confidence 10 0 01111222221 5689999999999987 3 455556666431
Q ss_pred cCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCC-
Q 014990 315 KGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGP- 393 (415)
Q Consensus 315 ~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~- 393 (415)
.+|+.+++++|.||+|+|++|+. ++....++..+ +|++.+|++ ++|+.|||||+|||+..+
T Consensus 232 -----------~~g~~~~i~~D~vi~a~G~~p~~----~~l~~~~~~~~-~g~i~vd~~--~~t~~~~vya~GD~~~~~~ 293 (335)
T 2zbw_A 232 -----------QTQEELALEVDAVLILAGYITKL----GPLANWGLALE-KNKIKVDTT--MATSIPGVYACGDIVTYPG 293 (335)
T ss_dssp -----------TTCCEEEEECSEEEECCCEEEEC----GGGGGSCCCEE-TTEEECCTT--CBCSSTTEEECSTTEECTT
T ss_pred -----------CCCceEEEecCEEEEeecCCCCc----hHhhhcceecc-CCeeeeCCC--CCCCCCCEEEeccccccCc
Confidence 03445689999999999999975 34455566666 689999986 889999999999998533
Q ss_pred -ccchhhhhhhHHHHHhhccc
Q 014990 394 -TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 394 -~~~~~~a~~~g~~~a~~i~~ 413 (415)
......|+.||+.+|.+|..
T Consensus 294 ~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 294 KLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhHHHHHHHHHHHHH
Confidence 34555799999999999864
No 20
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2e-32 Score=273.08 Aligned_cols=291 Identities=18% Similarity=0.164 Sum_probs=201.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc---cccCCCCCCcchHHHHHHHHHHhhccCeEEEece
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL---VRSGVAPDHPETKIVINQFSRVVQHERCSFFGNV 93 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
+..++|||||||+||+++|..|++.++..+|+|||+++.++.. +......+.....++.....+.+...+++++.++
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 86 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGA 86 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCC
Confidence 3568999999999999999999999954569999998765432 1111112221222222233445566789998885
Q ss_pred Eec------eEEEeccc-ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCCCCCCC-CCeEE
Q 014990 94 TLG------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLSPDLKS-TDTAV 163 (415)
Q Consensus 94 ~v~------~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~-~k~V~ 163 (415)
.+. +.+...++ ...||+||+|||+ .|+.|++||.+.+++++...... .+... +.. +++|+
T Consensus 87 ~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~-~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~---------~~~~~~~vv 156 (415)
T 3lxd_A 87 EVVSLDPAAHTVKLGDGSAIEYGKLIWATGG-DPRRLSCVGADLAGVHAVRTKEDADRLMAE---------LDAGAKNAV 156 (415)
T ss_dssp CEEEEETTTTEEEETTSCEEEEEEEEECCCE-ECCCCBTTSSCCBTEECCCSHHHHHHHHHH---------HHTTCCEEE
T ss_pred EEEEEECCCCEEEECCCCEEEeeEEEEccCC-ccCCCCCCCccccCEEEEcCHHHHHHHHHH---------hhhcCCeEE
Confidence 542 24555444 3589999999998 78888999988777765432211 11110 113 89999
Q ss_pred EEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccC
Q 014990 164 ILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLI 243 (415)
Q Consensus 164 VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (415)
|||+|.+|+|+|..+.+ .+ .+|+++.+.+.+......+++
T Consensus 157 ViGgG~~g~e~A~~l~~--------------------~g-~~Vtvv~~~~~~l~~~~~~~~------------------- 196 (415)
T 3lxd_A 157 VIGGGYIGLEAAAVLTK--------------------FG-VNVTLLEALPRVLARVAGEAL------------------- 196 (415)
T ss_dssp EECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSSSTTTTTSCHHH-------------------
T ss_pred EECCCHHHHHHHHHHHh--------------------cC-CeEEEEecCCchhhhhcCHHH-------------------
Confidence 99999999999999986 34 589999998754322222222
Q ss_pred CCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcce
Q 014990 244 KSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQY 323 (415)
Q Consensus 244 ~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~ 323 (415)
...+.+.+. +.||+++++..+.++. . +++.+..+++.+
T Consensus 197 --------------~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~-~~~~v~~v~l~d------------ 234 (415)
T 3lxd_A 197 --------------SEFYQAEHR-------------AHGVDLRTGAAMDCIE--G-DGTKVTGVRMQD------------ 234 (415)
T ss_dssp --------------HHHHHHHHH-------------HTTCEEEETCCEEEEE--E-SSSBEEEEEESS------------
T ss_pred --------------HHHHHHHHH-------------hCCCEEEECCEEEEEE--e-cCCcEEEEEeCC------------
Confidence 111222222 5689999999999987 4 355665665432
Q ss_pred eccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccc-------
Q 014990 324 AVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGI------- 396 (415)
Q Consensus 324 ~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~------- 396 (415)
| ++++||.||+|+|++|+. ++....|+..+ +| +.+|++ ++|+.|||||+|||+..+...
T Consensus 235 ----G--~~i~aD~Vv~a~G~~p~~----~l~~~~gl~~~-~g-i~vd~~--~~t~~~~iyA~GD~a~~~~~~~~g~~~~ 300 (415)
T 3lxd_A 235 ----G--SVIPADIVIVGIGIVPCV----GALISAGASGG-NG-VDVDEF--CRTSLTDVYAIGDCAAHANDFADGAVIR 300 (415)
T ss_dssp ----S--CEEECSEEEECSCCEESC----HHHHHTTCCCS-SS-EECCTT--CBCSSTTEEECGGGEEEECGGGTTCEEC
T ss_pred ----C--CEEEcCEEEECCCCccCh----HHHHhCCCCcC-CC-EEECCC--CCcCCCCEEEEEeeeeecCcccCCccee
Confidence 2 279999999999999975 34455666666 46 888886 789999999999998655422
Q ss_pred ---hhhhhhhHHHHHhhccc
Q 014990 397 ---IATNLYCAEETVSSLSL 413 (415)
Q Consensus 397 ---~~~a~~~g~~~a~~i~~ 413 (415)
...|+.||+.||.+|..
T Consensus 301 ~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 301 LESVQNANDMATAAAKDICG 320 (415)
T ss_dssp CCSHHHHHHHHHHHHHHHTT
T ss_pred echHHHHHHHHHHHHHHhcC
Confidence 35799999999999874
No 21
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.5e-32 Score=274.06 Aligned_cols=280 Identities=15% Similarity=0.214 Sum_probs=187.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc---ccc---CCCCCCcchHHHHHHHHHHhhccCeEEEece
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL---VRS---GVAPDHPETKIVINQFSRVVQHERCSFFGNV 93 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
+|||||||||||++||.+|++.+++.+|+|||+++..+.. +.+ +..... ...+.....+..++.+++++.+.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 78 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDR--RYALAYTPEKFYDRKQITVKTYH 78 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCG--GGTBCCCHHHHHHHHCCEEEETE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccch--hhhhhcCHHHHHHhcCCEEEeCC
Confidence 4799999999999999999999977899999998764321 111 110110 00000111233455678887776
Q ss_pred Eece------EEEecc------cccccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCCCC
Q 014990 94 TLGS------SVSLSE------LRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (415)
Q Consensus 94 ~v~~------~v~~~~------~~~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (415)
.+.. .++... ....||+||||||+ .|+.|++||... ..+.++......+.. ..
T Consensus 79 ~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs-~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~-----------~~ 146 (437)
T 4eqs_A 79 EVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA-SANSLGFESDITFTLRNLEDTDAIDQFIKA-----------NQ 146 (437)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE-EECCCCCCCTTEECCSSHHHHHHHHHHHHH-----------HT
T ss_pred eEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC-ccccccccCceEEeeccHHHHHHHHHhhhc-----------cC
Confidence 5421 222211 12479999999999 678888887531 111122111111111 14
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIR 238 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~ 238 (415)
+++|+|||+|.+|+|+|..+.+ .+ .+|+++.|++.+...+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~--------------------~g-~~Vtlv~~~~~ll~~~------------------- 186 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYE--------------------RG-LHPTLIHRSDKINKLM------------------- 186 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--------------------HT-CEEEEEESSSCCSTTS-------------------
T ss_pred CcEEEEECCccchhhhHHHHHh--------------------cC-Ccceeeeeeccccccc-------------------
Confidence 7899999999999999999986 33 5899999987653211
Q ss_pred ccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCC
Q 014990 239 EDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGG 318 (415)
Q Consensus 239 ~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~ 318 (415)
..++ ...+.+.+. ++||+++++..+.++. . + .+.++
T Consensus 187 ----------d~~~-----~~~~~~~l~-------------~~gV~i~~~~~v~~~~--~--~----~v~~~-------- 222 (437)
T 4eqs_A 187 ----------DADM-----NQPILDELD-------------KREIPYRLNEEINAIN--G--N----EITFK-------- 222 (437)
T ss_dssp ----------CGGG-----GHHHHHHHH-------------HTTCCEEESCCEEEEE--T--T----EEEET--------
T ss_pred ----------cchh-----HHHHHHHhh-------------ccceEEEeccEEEEec--C--C----eeeec--------
Confidence 1111 122223332 5689999988877764 2 2 23321
Q ss_pred CCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCc----
Q 014990 319 PGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPT---- 394 (415)
Q Consensus 319 ~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~---- 394 (415)
+| ++++||.||||+|++|+. .+.+..|+.++++|++.+|++ ++|++|||||+|||+..+.
T Consensus 223 --------~g--~~~~~D~vl~a~G~~Pn~----~~~~~~gl~~~~~G~I~vd~~--~~Ts~p~IyA~GDva~~~~~~~~ 286 (437)
T 4eqs_A 223 --------SG--KVEHYDMIIEGVGTHPNS----KFIESSNIKLDRKGFIPVNDK--FETNVPNIYAIGDIATSHYRHVD 286 (437)
T ss_dssp --------TS--CEEECSEEEECCCEEESC----GGGTTSSCCCCTTSCEECCTT--CBCSSTTEEECGGGEEEEBSSSS
T ss_pred --------CC--eEEeeeeEEEEeceecCc----HHHHhhhhhhccCCcEecCCC--ccCCCCCEEEEEEccCcccccCC
Confidence 22 378999999999999976 455777899999999999987 8999999999999985432
Q ss_pred -----cchhhhhhhHHHHHhhccc
Q 014990 395 -----GIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 395 -----~~~~~a~~~g~~~a~~i~~ 413 (415)
.....|..||+.+|+||..
T Consensus 287 ~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 287 LPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp SEECCCSHHHHHHHHHHHHHHHHS
T ss_pred ccccchhHHHHHHHHHHHHHHHcC
Confidence 2345789999999999864
No 22
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.98 E-value=5e-32 Score=258.95 Aligned_cols=277 Identities=12% Similarity=0.115 Sum_probs=181.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCC-----cchHHHHHHHHHHhhcc-CeEE
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDH-----PETKIVINQFSRVVQHE-RCSF 89 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~ 89 (415)
.++.+||+||||||||++||.+|+|.+ .+|+|||++.. ||.+.... |++ ..+.++.....+.+.++ .+.+
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g--~~v~lie~~~~-gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRAR--KQIALFDNNTN-RNRVTQNS-HGFITRDGIKPEEFKEIGLNEVMKYPSVHY 78 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSCC-GGGGSSCB-CCSTTCTTBCHHHHHHHHHHHHTTSTTEEE
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCC-CCeeeeec-CCccCCCCCCHHHHHHHHHHHHHhcCCEEE
Confidence 467899999999999999999999999 99999998754 44332111 211 23445555555555444 4555
Q ss_pred EeceEec--------eEEEeccc-ccccCEEEEccCCCCCCCCCCCCCC---CCCeeechhhHHHhcCCCCCCCCCCCCC
Q 014990 90 FGNVTLG--------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGED---LIGVHSAREFVWWYNGHPDGKNLSPDLK 157 (415)
Q Consensus 90 ~~~~~v~--------~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 157 (415)
.....+. ..+...+. ...||+||||||+ .|+.|++||.+ ..++++...... . ..
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs-~p~~p~i~G~~~~~~~~v~~~~~~~~----~---------~~ 144 (304)
T 4fk1_A 79 YEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM-QEEFPSIPNVREYYGKSLFSCPYCDG----W---------EL 144 (304)
T ss_dssp EECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC-EEECCSCTTHHHHBTTTEESCHHHHS----G---------GG
T ss_pred EeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC-ccccccccCccccccceeeeccccch----h---------Hh
Confidence 5544431 12333333 3479999999999 78999999965 234444332211 1 11
Q ss_pred CCCeEEEEcCChh-HHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEE
Q 014990 158 STDTAVILGQGNV-ALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (415)
Q Consensus 158 ~~k~V~VVG~G~s-g~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (415)
.+++++|||+|.. ++|+|..+.+ ...+|+++.|..... . .+
T Consensus 145 ~~~~~~VIggG~~~~~e~a~~~~~---------------------~~~~v~i~~~~~~~~----~-~~------------ 186 (304)
T 4fk1_A 145 KDQPLIIISENEDHTLHMTKLVYN---------------------WSTDLVIATNGNELS----Q-TI------------ 186 (304)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHTT---------------------TCSCEEEECSSCCCC----H-HH------------
T ss_pred cCCceeeecCCCchhhhHHHHHHh---------------------CCceEEEEeccccch----h-hh------------
Confidence 5778899988876 4677776664 446888887765321 1 11
Q ss_pred EcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecC
Q 014990 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKG 316 (415)
Q Consensus 237 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~ 316 (415)
.+.+. ++++.++.. .+..+. . +++.+..+++.
T Consensus 187 -------------------------~~~l~-------------~~g~~~~~~-~v~~~~--~-~~~~~~~v~~~------ 218 (304)
T 4fk1_A 187 -------------------------MDELS-------------NKNIPVITE-SIRTLQ--G-EGGYLKKVEFH------ 218 (304)
T ss_dssp -------------------------HHHHH-------------TTTCCEECS-CEEEEE--S-GGGCCCEEEET------
T ss_pred -------------------------hhhhh-------------ccceeEeee-eEEEee--c-CCCeeeeeecc------
Confidence 11111 445666654 345554 3 34555555442
Q ss_pred CCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccc
Q 014990 317 GGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGI 396 (415)
Q Consensus 317 ~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~ 396 (415)
+++++++|.+++++|.+|++ .+....|+.++++|++.+|++ ++||.|||||+|||++.+...
T Consensus 219 ------------~g~~i~~~~~vi~~g~~~~~----~~~~~~g~~~~~~G~I~vd~~--~~Ts~p~IyA~GDv~~~~~~~ 280 (304)
T 4fk1_A 219 ------------SGLRIERAGGFIVPTFFRPN----QFIEQLGCELQSNGTFVIDDF--GRTSEKNIYLAGETTTQGPSS 280 (304)
T ss_dssp ------------TSCEECCCEEEECCEEECSS----CHHHHTTCCCCTTSSSCSSTT--CBCSSTTEEECSHHHHTSCCC
T ss_pred ------------ccceeeecceeeeeccccCC----hhhhhcCeEECCCCCEEECcC--CccCCCCEEEEeccCCCcchH
Confidence 22378899888888877755 244567888999999999987 899999999999998644433
Q ss_pred hhhhhhhHHHHHhhcccc
Q 014990 397 IATNLYCAEETVSSLSLI 414 (415)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~ 414 (415)
+..|+.||+.||..|++.
T Consensus 281 ~~~A~~~G~~AA~~i~~~ 298 (304)
T 4fk1_A 281 LIIAASQGNKAAIAINSD 298 (304)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 447999999999998753
No 23
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.98 E-value=5.2e-31 Score=257.60 Aligned_cols=286 Identities=20% Similarity=0.189 Sum_probs=200.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC-------CCCCc--chHHHHHHHHHHhhccCeE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------APDHP--ETKIVINQFSRVVQHERCS 88 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~ 88 (415)
..++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.... .+.++ ...++..++.+.++..++.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 90 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNN--ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPD 90 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCE
Confidence 4679999999999999999999998 99999999988877653111 12222 3356777788888888888
Q ss_pred EEeceEece---------EEEeccc-ccccCEEEEccCCC--CCCCCCCCC-CC-CC--CeeechhhHHHhcCCCCCCCC
Q 014990 89 FFGNVTLGS---------SVSLSEL-RQLYHVVVLAYGAE--SDRALGIPG-ED-LI--GVHSAREFVWWYNGHPDGKNL 152 (415)
Q Consensus 89 ~~~~~~v~~---------~v~~~~~-~~~~d~lvlAtG~~--~~~~~~i~g-~~-~~--~v~~~~~~~~~~~~~~~~~~~ 152 (415)
++.+..+.. .+...++ ...||+||+|||+. .|..+++|| .+ .. .+++... ..
T Consensus 91 ~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~------~~------ 158 (360)
T 3ab1_A 91 VVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVK------SV------ 158 (360)
T ss_dssp EECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCS------CG------
T ss_pred EEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecC------CH------
Confidence 877655421 2333333 35799999999984 366667777 43 21 2322210 00
Q ss_pred CCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCC
Q 014990 153 SPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKN 232 (415)
Q Consensus 153 ~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~ 232 (415)
....+++|+|||+|.+|+|+|..|.+ . ..+|+++.|++.+..
T Consensus 159 --~~~~~~~vvVvG~G~~g~e~A~~l~~--------------------~-g~~V~lv~~~~~~~~--------------- 200 (360)
T 3ab1_A 159 --EDFKGKRVVIVGGGDSALDWTVGLIK--------------------N-AASVTLVHRGHEFQG--------------- 200 (360)
T ss_dssp --GGGTTCEEEEECSSHHHHHHHHHTTT--------------------T-SSEEEEECSSSSCSS---------------
T ss_pred --HHcCCCcEEEECCCHHHHHHHHHHHh--------------------c-CCEEEEEEcCCCCCC---------------
Confidence 01157999999999999999999986 2 468999998864311
Q ss_pred eeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeee
Q 014990 233 LYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKT 312 (415)
Q Consensus 233 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~ 312 (415)
.+. ...++.+.+. +.||+++++..+.++. . +++.+..+.+..
T Consensus 201 ------------~~~---------~~~~l~~~~~-------------~~gv~i~~~~~v~~i~--~-~~~~v~~v~~~~- 242 (360)
T 3ab1_A 201 ------------HGK---------TAHEVERARA-------------NGTIDVYLETEVASIE--E-SNGVLTRVHLRS- 242 (360)
T ss_dssp ------------CSH---------HHHSSHHHHH-------------HTSEEEESSEEEEEEE--E-ETTEEEEEEEEE-
T ss_pred ------------CHH---------HHHHHHHHhh-------------cCceEEEcCcCHHHhc--c-CCCceEEEEEEe-
Confidence 010 0011111111 4579999999999887 4 345565666541
Q ss_pred eecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccC
Q 014990 313 ALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRG 392 (415)
Q Consensus 313 ~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~ 392 (415)
.+|+.+++++|.||+|+|++|+. ++....++.++ +|++.+|+. ++|+.|||||+|||+..
T Consensus 243 -------------~~g~~~~i~~D~vi~a~G~~p~~----~~l~~~~~~~~-~g~i~vd~~--~~t~~~~vya~GD~~~~ 302 (360)
T 3ab1_A 243 -------------SDGSKWTVEADRLLILIGFKSNL----GPLARWDLELY-ENALVVDSH--MKTSVDGLYAAGDIAYY 302 (360)
T ss_dssp -------------TTCCEEEEECSEEEECCCBCCSC----GGGGGSSCCEE-TTEEECCTT--SBCSSTTEEECSTTEEC
T ss_pred -------------cCCCeEEEeCCEEEECCCCCCCH----HHHHhhccccc-cCeeeecCC--CcCCCCCEEEecCccCC
Confidence 14555689999999999999965 34455566666 689999985 88999999999999853
Q ss_pred C--ccchhhhhhhHHHHHhhccc
Q 014990 393 P--TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 393 ~--~~~~~~a~~~g~~~a~~i~~ 413 (415)
+ ......|+.||+.+|.+|.+
T Consensus 303 ~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 303 PGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp TTCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCccceeehhHHHHHHHHHHHHh
Confidence 3 34555799999999999864
No 24
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.98 E-value=5.9e-31 Score=270.01 Aligned_cols=292 Identities=17% Similarity=0.226 Sum_probs=201.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CC------------------------CCCCc-
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GV------------------------APDHP- 69 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~------------------------~~~~~- 69 (415)
.+..++|+|||||+||+++|.+|++.+ .+|+|||+++.+||...+ +. .+...
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 117 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMG--GRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE 117 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHh
Confidence 346789999999999999999999998 999999999877775321 10 11111
Q ss_pred c---hHHHHHHHH-------HHh-----hccCeEEE-eceEe---ceEEEecccccccCEEEEccCCCCCCCCCCCCCCC
Q 014990 70 E---TKIVINQFS-------RVV-----QHERCSFF-GNVTL---GSSVSLSELRQLYHVVVLAYGAESDRALGIPGEDL 130 (415)
Q Consensus 70 ~---~~~~~~~~~-------~~~-----~~~~~~~~-~~~~v---~~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~ 130 (415)
. ..++...+. ..+ +..+++++ .+... ...+.+......||+||+|||+ .|..|++||.+.
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g~~~~~d~lViATGs-~p~~p~i~G~~~ 196 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGA-GPGTLDVPGVNA 196 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETTEEEEBSCEEECCCE-ECCCCCSTTTTS
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECCEEEEeCEEEECCCC-CCCCCCCCCccc
Confidence 1 333333332 344 56678877 33221 1234443334589999999999 788889999887
Q ss_pred CCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEe
Q 014990 131 IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVG 210 (415)
Q Consensus 131 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 210 (415)
.++++..++...+.. . ++++|+|||+|.+|+|+|..|.+ .+ .+|+++.
T Consensus 197 ~~v~~~~~~~~~l~~----------~-~g~~vvViGgG~~g~E~A~~l~~--------------------~G-~~Vtlv~ 244 (523)
T 1mo9_A 197 KGVFDHATLVEELDY----------E-PGSTVVVVGGSKTAVEYGCFFNA--------------------TG-RRTVMLV 244 (523)
T ss_dssp BTEEEHHHHHHHCCS----------C-CCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEC
T ss_pred CcEeeHHHHHHHHHh----------c-CCCeEEEECCCHHHHHHHHHHHH--------------------cC-CeEEEEE
Confidence 778877665522211 1 35999999999999999999986 34 5899999
Q ss_pred ecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccc
Q 014990 211 RRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRK 290 (415)
Q Consensus 211 r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~ 290 (415)
+++.+...+ +++ +...+.+.+. +.||+++++..
T Consensus 245 ~~~~~l~~~-~~~---------------------------------~~~~l~~~l~-------------~~GV~i~~~~~ 277 (523)
T 1mo9_A 245 RTEPLKLIK-DNE---------------------------------TRAYVLDRMK-------------EQGMEIISGSN 277 (523)
T ss_dssp SSCTTTTCC-SHH---------------------------------HHHHHHHHHH-------------HTTCEEESSCE
T ss_pred ecCcccccc-cHH---------------------------------HHHHHHHHHH-------------hCCcEEEECCE
Confidence 987542211 111 1112222332 56899999999
Q ss_pred cccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCc-ccCCCCccccCCCcee
Q 014990 291 PDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLP-FDNHKGIVPNIRGRVL 369 (415)
Q Consensus 291 ~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~-~~~~~g~~~~~~G~i~ 369 (415)
+.++. .++++.+.++.+.. .+|+ .+++||.||+|+|++|+. . +....|+.++++|++.
T Consensus 278 V~~i~--~~~~~~v~~~~v~~--------------~~G~-~~i~aD~Vv~A~G~~p~~----~~~l~~~gl~~~~~G~i~ 336 (523)
T 1mo9_A 278 VTRIE--EDANGRVQAVVAMT--------------PNGE-MRIETDFVFLGLGEQPRS----AELAKILGLDLGPKGEVL 336 (523)
T ss_dssp EEEEE--ECTTSBEEEEEEEE--------------TTEE-EEEECSCEEECCCCEECC----HHHHHHHTCCBCTTSCBC
T ss_pred EEEEE--EcCCCceEEEEEEE--------------CCCc-EEEEcCEEEECcCCccCC----ccCHHHcCCccCCCCCEE
Confidence 99886 31233332232211 1232 379999999999999975 2 3455677788889999
Q ss_pred eccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 370 KNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 370 v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|++ ++|+.|||||+|||+..+. ....|+.||+.||.+|..
T Consensus 337 Vd~~--~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 337 VNEY--LQTSVPNVYAVGDLIGGPM-EMFKARKSGCYAARNVMG 377 (523)
T ss_dssp CCTT--SBCSSTTEEECGGGGCSSC-SHHHHHHHHHHHHHHHTT
T ss_pred ECCC--CccCCCCEEEEeecCCCcc-cHHHHHHHHHHHHHHHcC
Confidence 9987 8899999999999986554 455799999999999874
No 25
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.98 E-value=3e-31 Score=270.18 Aligned_cols=289 Identities=14% Similarity=0.188 Sum_probs=195.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC-CCceEEEEcCCCCCCCccccCC---CCCC-cchHHHHHHHHHHhhccCeEEEece
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAH-QEAQVDIIDRLPTPFGLVRSGV---APDH-PETKIVINQFSRVVQHERCSFFGNV 93 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g-~~~~v~lie~~~~~gg~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
.++|+|||||+||+++|..|++.+ ++.+|+|||+++..+... .+. .... ..+.++.....+.+++.+++++.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 113 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLG-AGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMES 113 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCG-GGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccc-cccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCC
Confidence 489999999999999999999986 669999999988654321 110 0000 1111111122334455678887666
Q ss_pred Eec------eEEEec-c---cccccCEEEEccCCCCCCCCCCCCCC-----------CCCeeechhhHHH--hcCCCCCC
Q 014990 94 TLG------SSVSLS-E---LRQLYHVVVLAYGAESDRALGIPGED-----------LIGVHSAREFVWW--YNGHPDGK 150 (415)
Q Consensus 94 ~v~------~~v~~~-~---~~~~~d~lvlAtG~~~~~~~~i~g~~-----------~~~v~~~~~~~~~--~~~~~~~~ 150 (415)
.+. ..+.+. + ....||+||+|||+ .|+.|++||.+ .+++++...+... +....
T Consensus 114 ~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~--- 189 (490)
T 2bc0_A 114 PVQSIDYDAKTVTALVDGKNHVETYDKLIFATGS-QPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKL--- 189 (490)
T ss_dssp CEEEEETTTTEEEEEETTEEEEEECSEEEECCCE-EECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHT---
T ss_pred EEEEEECCCCEEEEEeCCcEEEEECCEEEECCCC-CcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHh---
Confidence 431 234443 2 23589999999998 68888899987 5677764432211 11000
Q ss_pred CCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcC
Q 014990 151 NLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGI 230 (415)
Q Consensus 151 ~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~ 230 (415)
....+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|++.+.....++++
T Consensus 190 ----~~~~~~~vvVIGgG~ig~E~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~~~~~------ 238 (490)
T 2bc0_A 190 ----ENKDIKRVAVVGAGYIGVELAEAFQR--------------------KG-KEVVLIDVVDTCLAGYYDRDL------ 238 (490)
T ss_dssp ----TSTTCCEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSSSTTTTTSCHHH------
T ss_pred ----hhcCCceEEEECCCHHHHHHHHHHHH--------------------CC-CeEEEEEcccchhhhHHHHHH------
Confidence 00258999999999999999999986 34 589999998754321222222
Q ss_pred CCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEe
Q 014990 231 KNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFE 310 (415)
Q Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~ 310 (415)
...+.+.+. +.||+++++..+.++. . ++.+..+.+
T Consensus 239 ---------------------------~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~--~~~v~~v~~- 273 (490)
T 2bc0_A 239 ---------------------------TDLMAKNME-------------EHGIQLAFGETVKEVA--G--NGKVEKIIT- 273 (490)
T ss_dssp ---------------------------HHHHHHHHH-------------TTTCEEEETCCEEEEE--C--SSSCCEEEE-
T ss_pred ---------------------------HHHHHHHHH-------------hCCeEEEeCCEEEEEE--c--CCcEEEEEE-
Confidence 111222222 6689999999999986 3 444433432
Q ss_pred eeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccc
Q 014990 311 KTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLK 390 (415)
Q Consensus 311 ~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~ 390 (415)
+| ++++||.||+|+|++|+. ++.+.. +.++++|++.+|++ ++|+.|||||+|||+
T Consensus 274 ----------------~g--~~i~~D~Vi~a~G~~p~~----~ll~~~-l~~~~~G~I~Vd~~--~~t~~~~IyA~GD~~ 328 (490)
T 2bc0_A 274 ----------------DK--NEYDVDMVILAVGFRPNT----TLGNGK-IDLFRNGAFLVNKR--QETSIPGVYAIGDCA 328 (490)
T ss_dssp ----------------SS--CEEECSEEEECCCEEECC----GGGTTC-SCBCTTSCBCCCTT--CBCSSTTEEECGGGB
T ss_pred ----------------CC--cEEECCEEEECCCCCcCh----HHHHhh-hccCCCCCEEECCC--cccCCCCEEEeeeeE
Confidence 12 279999999999999976 343444 66777899999987 899999999999998
Q ss_pred cCC---------ccchhhhhhhHHHHHhhccc
Q 014990 391 RGP---------TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 391 ~~~---------~~~~~~a~~~g~~~a~~i~~ 413 (415)
..+ ......|+.||+.+|.+|..
T Consensus 329 ~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 329 TIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp CEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 532 13455799999999999864
No 26
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.97 E-value=1.2e-30 Score=267.36 Aligned_cols=282 Identities=16% Similarity=0.210 Sum_probs=202.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC--CC--C--CCcchHHHHHHHHHHhhccCeEEE
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG--VA--P--DHPETKIVINQFSRVVQHERCSFF 90 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~--~~--~--~~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
+..++|+||||||||+++|.+|++.| .+|+|||+ ..||.+... +. + .+....++...+.+.+++.+++++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G--~~v~lie~--~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~ 285 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKG--IRTGLMGE--RFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVI 285 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECS--STTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEE
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCC--CeEEEEEC--CCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 35789999999999999999999999 99999986 355554321 10 1 112345667778888888899998
Q ss_pred eceEec-----------eEEEeccc-ccccCEEEEccCCCCCCCCCCCCCC---CCCeeechhhHHHhcCCCCCCCCCCC
Q 014990 91 GNVTLG-----------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGED---LIGVHSAREFVWWYNGHPDGKNLSPD 155 (415)
Q Consensus 91 ~~~~v~-----------~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~---~~~v~~~~~~~~~~~~~~~~~~~~~~ 155 (415)
.++.+. ..++++++ ...||+||+|||+ .++.|++||.+ ..++++... . ...
T Consensus 286 ~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~-~~~~~~ipG~~~~~~~~v~~~~~-~------------~~~ 351 (521)
T 1hyu_A 286 DSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGA-KWRNMNVPGEDQYRTKGVTYCPH-C------------DGP 351 (521)
T ss_dssp CSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCE-EECCCCCTTTTTTTTTTEECCTT-C------------CGG
T ss_pred cCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCC-CcCCCCCCChhhhcCceEEEeec-C------------chh
Confidence 885431 22444444 3579999999999 67778888875 123332211 0 001
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeE
Q 014990 156 LKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYV 235 (415)
Q Consensus 156 ~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~ 235 (415)
...+++|+|||+|++|+|+|..|.+ ...+|+++.|++.+.. .+.+
T Consensus 352 ~~~~k~V~ViGgG~~g~E~A~~L~~---------------------~g~~Vtlv~~~~~l~~---~~~l----------- 396 (521)
T 1hyu_A 352 LFKGKRVAVIGGGNSGVEAAIDLAG---------------------IVEHVTLLEFAPEMKA---DQVL----------- 396 (521)
T ss_dssp GGBTSEEEEECCSHHHHHHHHHHHH---------------------HBSEEEEECSSSSCCS---CHHH-----------
T ss_pred hcCCCeEEEECCCHHHHHHHHHHHh---------------------hCCEEEEEEeCcccCc---CHHH-----------
Confidence 2368999999999999999999986 2368999998865321 0001
Q ss_pred EEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCc-eeEEEEeccccccccccCCCCCCeeeEEEeeeee
Q 014990 236 HIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQ-RELHFVFFRKPDSFLESNERSGHVSGVHFEKTAL 314 (415)
Q Consensus 236 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~ 314 (415)
.+.+. + .||+++++..++++. . +++++.++.+.+.
T Consensus 397 --------------------------~~~l~-------------~~~gV~v~~~~~v~~i~--~-~~~~v~~v~~~~~-- 432 (521)
T 1hyu_A 397 --------------------------QDKVR-------------SLKNVDIILNAQTTEVK--G-DGSKVVGLEYRDR-- 432 (521)
T ss_dssp --------------------------HHHHT-------------TCTTEEEECSEEEEEEE--E-CSSSEEEEEEEET--
T ss_pred --------------------------HHHHh-------------cCCCcEEEeCCEEEEEE--c-CCCcEEEEEEEeC--
Confidence 11111 3 589999999999987 4 3556767776541
Q ss_pred cCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCc
Q 014990 315 KGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPT 394 (415)
Q Consensus 315 ~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~ 394 (415)
.+|+..++++|.|++++|++|+. +|... .+.++++|++.+|++ ++|+.|||||+|||+..+.
T Consensus 433 -----------~~g~~~~i~~D~vi~a~G~~pn~----~~l~~-~l~~~~~G~I~Vd~~--~~ts~p~VfA~GD~~~~~~ 494 (521)
T 1hyu_A 433 -----------VSGDIHSVALAGIFVQIGLLPNT----HWLEG-ALERNRMGEIIIDAK--CETSVKGVFAAGDCTTVPY 494 (521)
T ss_dssp -----------TTCCEEEEECSEEEECCCEEESC----GGGTT-TSCBCTTSCBCCCTT--CBCSSTTEEECSTTBCCSS
T ss_pred -----------CCCceEEEEcCEEEECcCCCCCc----hHHhh-hhccCCCCcEEeCCC--CCCCCCCEEEeecccCCCc
Confidence 14555689999999999999976 34333 366788899999987 8899999999999997665
Q ss_pred cchhhhhhhHHHHHhhccc
Q 014990 395 GIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 395 ~~~~~a~~~g~~~a~~i~~ 413 (415)
.....|+.||+.||.+|..
T Consensus 495 ~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 495 KQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred ceeeehHHhHHHHHHHHHH
Confidence 5555899999999999875
No 27
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.9e-31 Score=268.70 Aligned_cols=290 Identities=16% Similarity=0.174 Sum_probs=193.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC---CCCCcchHHHHHHHHHHh-hccCeEEEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDHPETKIVINQFSRVV-QHERCSFFGNV 93 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 93 (415)
.+++|+|||||+||+++|..|++.+++.+|+|||+++.++... ++. ..+...+.++..+..+.+ +..+++++.++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 80 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP-CGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNA 80 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-------------------------CTHHHHTTCEEETTC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC-cCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecC
Confidence 3589999999999999999999996559999999998765332 111 011122223333333333 56789998886
Q ss_pred Eec------eEEEeccc--ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCCCCCCCCCeEE
Q 014990 94 TLG------SSVSLSEL--RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLSPDLKSTDTAV 163 (415)
Q Consensus 94 ~v~------~~v~~~~~--~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~k~V~ 163 (415)
.+. ..+...+. ...||+||+|||+ .|+.|++||.+.+++++...... .+...+. ...+++|+
T Consensus 81 ~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~-------~~~~~~vv 152 (449)
T 3kd9_A 81 EVIEVDTGYVRVRENGGEKSYEWDYLVFANGA-SPQVPAIEGVNLKGVFTADLPPDALAIREYME-------KYKVENVV 152 (449)
T ss_dssp EEEEECSSEEEEECSSSEEEEECSEEEECCCE-EECCCSCBTTTSTTEECSCSTHHHHHHHHHHS-------SSCCCEEE
T ss_pred EEEEEecCCCEEEECCceEEEEcCEEEECCCC-CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH-------hcCCCeEE
Confidence 542 23444433 3579999999998 78888999988777765432211 1111100 01578999
Q ss_pred EEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccC
Q 014990 164 ILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLI 243 (415)
Q Consensus 164 VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (415)
|||+|.+|+|+|..|.+ .+ .+|+++.|++.+.....++++.+
T Consensus 153 ViGgG~~g~E~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~~~~~~~----------------- 194 (449)
T 3kd9_A 153 IIGGGYIGIEMAEAFAA--------------------QG-KNVTMIVRGERVLRRSFDKEVTD----------------- 194 (449)
T ss_dssp EECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSSSTTTTTSCHHHHH-----------------
T ss_pred EECCCHHHHHHHHHHHh--------------------CC-CeEEEEEcCCccchhhcCHHHHH-----------------
Confidence 99999999999999986 34 58999999876533212221111
Q ss_pred CCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcce
Q 014990 244 KSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQY 323 (415)
Q Consensus 244 ~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~ 323 (415)
.+.+.+ . +. |+++++..+.++. . ++.+..+..
T Consensus 195 ----------------~l~~~l----~---------~~-v~i~~~~~v~~i~--~--~~~v~~v~~-------------- 226 (449)
T 3kd9_A 195 ----------------ILEEKL----K---------KH-VNLRLQEITMKIE--G--EERVEKVVT-------------- 226 (449)
T ss_dssp ----------------HHHHHH----T---------TT-SEEEESCCEEEEE--C--SSSCCEEEE--------------
T ss_pred ----------------HHHHHH----H---------hC-cEEEeCCeEEEEe--c--cCcEEEEEe--------------
Confidence 111222 1 45 8999998888886 3 333332211
Q ss_pred eccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeecccc------CC---c
Q 014990 324 AVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKR------GP---T 394 (415)
Q Consensus 324 ~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~------~~---~ 394 (415)
++ .++++|.||+|+|++|+. ++....|+.++++|++.+|++ ++|+.|||||+|||+. +. .
T Consensus 227 ---~g--~~i~~D~Vv~a~G~~p~~----~l~~~~gl~~~~~G~i~vd~~--~~t~~~~IyA~GD~~~~~~~~~g~~~~~ 295 (449)
T 3kd9_A 227 ---DA--GEYKAELVILATGIKPNI----ELAKQLGVRIGETGAIWTNEK--MQTSVENVYAAGDVAETRHVITGRRVWV 295 (449)
T ss_dssp ---TT--EEEECSEEEECSCEEECC----HHHHHTTCCBCTTSSBCCCTT--CBCSSTTEEECSTTBCEEBTTTCSEECC
T ss_pred ---CC--CEEECCEEEEeeCCccCH----HHHHhCCccCCCCCCEEECCC--CccCCCCEEEeeeeeeeccccCCceEEe
Confidence 22 379999999999999975 344566788888999999986 8999999999999974 21 2
Q ss_pred cchhhhhhhHHHHHhhccc
Q 014990 395 GIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 395 ~~~~~a~~~g~~~a~~i~~ 413 (415)
.....|..||+.+|.+|..
T Consensus 296 ~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 296 PLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHhcC
Confidence 3455799999999999864
No 28
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.97 E-value=5.9e-32 Score=269.32 Aligned_cols=286 Identities=17% Similarity=0.231 Sum_probs=195.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc---cccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL---VRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
++|+|||||+||+++|..|++.+++.+|+|||+++.++.. +......+......+ ....+.+.+.+++++.++.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCEEE
Confidence 5899999999999999999999955569999998865421 000000000001111 111233455689998885542
Q ss_pred ------eEEEeccc-ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCCCCCCCCCeEEEEcC
Q 014990 97 ------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLSPDLKSTDTAVILGQ 167 (415)
Q Consensus 97 ------~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~k~V~VVG~ 167 (415)
+.+...++ ...||+||+|||+ .|+.|++||.+.+++++...... .+... +..+++|+|||+
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~-~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~---------~~~~~~vvViGg 151 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGS-RARTMALPGSQLPGVVTLRTYGDVQVLRDS---------WTSATRLLIVGG 151 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCE-EECCCCCTTTTSTTEECCCSHHHHHHHHHH---------CCTTCEEEEECC
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCC-cccCCCCCCccccceEEeccHHHHHHHHHH---------hccCCeEEEECC
Confidence 24555444 3589999999999 68888999988777776533222 12111 226899999999
Q ss_pred ChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCC
Q 014990 168 GNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPT 247 (415)
Q Consensus 168 G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~ 247 (415)
|.+|+|+|..|.+ .+ .+|+++.+.+.+....
T Consensus 152 G~~g~E~A~~l~~--------------------~g-~~Vtvv~~~~~~l~~~---------------------------- 182 (410)
T 3ef6_A 152 GLIGCEVATTARK--------------------LG-LSVTILEAGDELLVRV---------------------------- 182 (410)
T ss_dssp SHHHHHHHHHHHH--------------------TT-CEEEEECSSSSSSHHH----------------------------
T ss_pred CHHHHHHHHHHHh--------------------CC-CeEEEEecCCccchhh----------------------------
Confidence 9999999999986 34 5899999886532100
Q ss_pred cHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccC
Q 014990 248 DEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGT 327 (415)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~ 327 (415)
..+.+...+.+.+. +.||+++++..+.++. . ++.+..+++. +
T Consensus 183 -----~~~~~~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~--~~~~~~v~~~----------------d 224 (410)
T 3ef6_A 183 -----LGRRIGAWLRGLLT-------------ELGVQVELGTGVVGFS--G--EGQLEQVMAS----------------D 224 (410)
T ss_dssp -----HCHHHHHHHHHHHH-------------HHTCEEECSCCEEEEE--C--SSSCCEEEET----------------T
T ss_pred -----cCHHHHHHHHHHHH-------------HCCCEEEeCCEEEEEe--c--cCcEEEEEEC----------------C
Confidence 00111222223332 5689999999999987 4 4455455542 2
Q ss_pred CceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCcc--------chhh
Q 014990 328 GEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTG--------IIAT 399 (415)
Q Consensus 328 g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~--------~~~~ 399 (415)
| ++++||.||+|+|++|+. ++....|+..+ +| +.+|++ ++|+.|||||+|||+..+.. ....
T Consensus 225 g--~~i~aD~Vv~a~G~~p~~----~l~~~~gl~~~-~g-i~vd~~--~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~ 294 (410)
T 3ef6_A 225 G--RSFVADSALICVGAEPAD----QLARQAGLACD-RG-VIVDHC--GATLAKGVFAVGDVASWPLRAGGRRSLETYMN 294 (410)
T ss_dssp S--CEEECSEEEECSCEEECC----HHHHHTTCCBS-SS-EECCTT--SBCSSTTEEECGGGEEEEBTTSSEECCCCHHH
T ss_pred C--CEEEcCEEEEeeCCeecH----HHHHhCCCccC-Ce-EEEccC--eeECCCCEEEEEcceeccCCCCCeeeechHHH
Confidence 2 279999999999999975 34455677766 45 888886 78999999999999864431 2457
Q ss_pred hhhhHHHHHhhccc
Q 014990 400 NLYCAEETVSSLSL 413 (415)
Q Consensus 400 a~~~g~~~a~~i~~ 413 (415)
|+.||+.||.+|..
T Consensus 295 A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 295 AQRQAAAVAAAILG 308 (410)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999874
No 29
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.97 E-value=1.1e-31 Score=266.75 Aligned_cols=288 Identities=17% Similarity=0.180 Sum_probs=195.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc-ccc--CCCCCCcchHHHHHHHHHHhhccCeEEEeceEe
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-VRS--GVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
+++|+|||||+||+++|..|++.+++.+|+|||+++.++.. ... ....+.....++.......+.+.+++++. ..+
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v 79 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRM 79 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEE
Confidence 46899999999999999999999944599999998754321 100 01011111111111223344556888877 333
Q ss_pred ------ceEEEeccc-ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCCCCCCCCCeEEEEc
Q 014990 96 ------GSSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLSPDLKSTDTAVILG 166 (415)
Q Consensus 96 ------~~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~k~V~VVG 166 (415)
.+.+...++ ...||+||+|||+ .|+.|++||.+.+++++...... .+... +..+++|+|||
T Consensus 80 ~~id~~~~~v~~~~g~~~~~d~lvlAtG~-~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~---------~~~~~~vvViG 149 (404)
T 3fg2_P 80 VSIDREGRKLLLASGTAIEYGHLVLATGA-RNRMLDVPNASLPDVLYLRTLDESEVLRQR---------MPDKKHVVVIG 149 (404)
T ss_dssp EEEETTTTEEEESSSCEEECSEEEECCCE-EECCCCSTTTTSTTEECCSSHHHHHHHHHH---------GGGCSEEEEEC
T ss_pred EEEECCCCEEEECCCCEEECCEEEEeeCC-CccCCCCCCCCCCcEEEECCHHHHHHHHHH---------hhcCCeEEEEC
Confidence 223555444 3589999999999 78888999988777775432221 11111 22579999999
Q ss_pred CChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCC
Q 014990 167 QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSP 246 (415)
Q Consensus 167 ~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p 246 (415)
+|.+|+|+|..+.+ .+ .+|+++.+.+.+......+++
T Consensus 150 gG~~g~e~A~~l~~--------------------~g-~~Vtvv~~~~~~~~~~~~~~~---------------------- 186 (404)
T 3fg2_P 150 AGFIGLEFAATARA--------------------KG-LEVDVVELAPRVMARVVTPEI---------------------- 186 (404)
T ss_dssp CSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSTTTTTSCHHH----------------------
T ss_pred CCHHHHHHHHHHHh--------------------CC-CEEEEEeCCCcchhhccCHHH----------------------
Confidence 99999999999986 33 589999988654322111111
Q ss_pred CcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceecc
Q 014990 247 TDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVG 326 (415)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~ 326 (415)
...+.+.+. +.||+++++..+.++. . +++.+..+++.
T Consensus 187 -----------~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~-~~~~v~~V~~~---------------- 223 (404)
T 3fg2_P 187 -----------SSYFHDRHS-------------GAGIRMHYGVRATEIA--A-EGDRVTGVVLS---------------- 223 (404)
T ss_dssp -----------HHHHHHHHH-------------HTTCEEECSCCEEEEE--E-ETTEEEEEEET----------------
T ss_pred -----------HHHHHHHHH-------------hCCcEEEECCEEEEEE--e-cCCcEEEEEeC----------------
Confidence 111222222 5689999999998887 4 34555555442
Q ss_pred CCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCcc---------ch
Q 014990 327 TGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTG---------II 397 (415)
Q Consensus 327 ~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~---------~~ 397 (415)
+| ++++||.||+|+|++|+. ++....|+..+ +| +.+|++ ++|+.|||||+|||+..+.. ..
T Consensus 224 dG--~~i~aD~Vv~a~G~~p~~----~l~~~~gl~~~-~G-i~vd~~--~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~ 293 (404)
T 3fg2_P 224 DG--NTLPCDLVVVGVGVIPNV----EIAAAAGLPTA-AG-IIVDQQ--LLTSDPHISAIGDCALFESVRFGETMRVESV 293 (404)
T ss_dssp TS--CEEECSEEEECCCEEECC----HHHHHTTCCBS-SS-EEECTT--SBCSSTTEEECGGGEEEEETTTTEEECCCSH
T ss_pred CC--CEEEcCEEEECcCCccCH----HHHHhCCCCCC-CC-EEECCC--cccCCCCEEEeecceeecCccCCceeeehHH
Confidence 23 279999999999999975 34455677666 46 889886 78999999999999864431 24
Q ss_pred hhhhhhHHHHHhhccc
Q 014990 398 ATNLYCAEETVSSLSL 413 (415)
Q Consensus 398 ~~a~~~g~~~a~~i~~ 413 (415)
..|+.||+.||.+|..
T Consensus 294 ~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 294 QNATDQARCVAARLTG 309 (404)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhCC
Confidence 5799999999999875
No 30
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.97 E-value=1.9e-31 Score=270.52 Aligned_cols=292 Identities=18% Similarity=0.206 Sum_probs=199.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCCC----------------------------
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH---------------------------- 68 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~~---------------------------- 68 (415)
..++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.. +..|.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g--~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLG--FKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVR 82 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCc
Confidence 4579999999999999999999998 999999999888775321 110100
Q ss_pred cchHHH-----------HHHHHHHhhccCeEEEeceEec-----eEEEecc---cccccCEEEEccCCCCCCCCCCCCCC
Q 014990 69 PETKIV-----------INQFSRVVQHERCSFFGNVTLG-----SSVSLSE---LRQLYHVVVLAYGAESDRALGIPGED 129 (415)
Q Consensus 69 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~---~~~~~d~lvlAtG~~~~~~~~i~g~~ 129 (415)
.....+ ...+...++..+++++.+..+. ..+...+ ....||+||+|||+ .|+.|+++|.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs-~p~~p~i~g~~ 161 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGS-EVTPFPGITID 161 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCE-EECCCTTCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCC-CCCCCCCCCCC
Confidence 001111 1122455566789988876542 1233333 23589999999999 68888899887
Q ss_pred CCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEE
Q 014990 130 LIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLV 209 (415)
Q Consensus 130 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 209 (415)
..+++++.++.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++
T Consensus 162 ~~~v~t~~~~~~----~---------~~~~~~vvViGgG~~g~E~A~~l~~--------------------~g-~~Vtlv 207 (474)
T 1zmd_A 162 EDTIVSSTGALS----L---------KKVPEKMVVIGAGVIGVELGSVWQR--------------------LG-ADVTAV 207 (474)
T ss_dssp SSSEECHHHHTT----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEE
T ss_pred cCcEEcHHHHhh----c---------cccCceEEEECCCHHHHHHHHHHHH--------------------cC-CEEEEE
Confidence 656766554331 1 0146899999999999999999986 34 589999
Q ss_pred eecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecc
Q 014990 210 GRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFR 289 (415)
Q Consensus 210 ~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~ 289 (415)
.|++.+.....++++ ...+.+.+. +.||+++++.
T Consensus 208 ~~~~~~l~~~~~~~~---------------------------------~~~l~~~l~-------------~~Gv~i~~~~ 241 (474)
T 1zmd_A 208 EFLGHVGGVGIDMEI---------------------------------SKNFQRILQ-------------KQGFKFKLNT 241 (474)
T ss_dssp CSSSSSSCSSCCHHH---------------------------------HHHHHHHHH-------------HTTCEEECSE
T ss_pred eccCccCCcccCHHH---------------------------------HHHHHHHHH-------------HCCCEEEeCc
Confidence 998754320111111 111222232 5689999999
Q ss_pred ccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCcee
Q 014990 290 KPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVL 369 (415)
Q Consensus 290 ~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~ 369 (415)
.+.++. . +++....+++.+. ..++++++++|.||+|+|++|+. ..+. .+..|+.++++|++.
T Consensus 242 ~v~~i~--~-~~~~~~~v~~~~~-------------~~~~~~~i~~D~vv~a~G~~p~~-~~l~-l~~~g~~~~~~G~i~ 303 (474)
T 1zmd_A 242 KVTGAT--K-KSDGKIDVSIEAA-------------SGGKAEVITCDVLLVCIGRRPFT-KNLG-LEELGIELDPRGRIP 303 (474)
T ss_dssp EEEEEE--E-CTTSCEEEEEEET-------------TSCCCEEEEESEEEECSCEEECC-TTSS-HHHHTCCCCTTSCCC
T ss_pred eEEEEE--E-cCCceEEEEEEec-------------CCCCceEEEcCEEEECcCCCcCC-CcCC-chhcCCccCCCCCEE
Confidence 999886 3 2322123333210 02344589999999999999975 1111 234567778789999
Q ss_pred eccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 370 KNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 370 v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|+. ++|+.|||||+|||+..+. +...|+.||+.+|.+|..
T Consensus 304 vd~~--~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 304 VNTR--FQTKIPNIYAIGDVVAGPM-LAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CCTT--CBCSSTTEEECGGGSSSCC-CHHHHHHHHHHHHHHHTT
T ss_pred ECcC--CccCCCCEEEeeecCCCCc-cHHHHHHHHHHHHHHhcC
Confidence 9987 7899999999999986554 455799999999999864
No 31
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=8.3e-31 Score=264.51 Aligned_cols=285 Identities=15% Similarity=0.214 Sum_probs=194.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-c------------------------CCCCCC--cch
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-S------------------------GVAPDH--PET 71 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-~------------------------~~~~~~--~~~ 71 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+. .+||... . ++.... ...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLG--QKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 478999999999999999999998 999999998 5555321 1 110000 011
Q ss_pred HH-----------HHHHHHHHhhccCeEEEeceEec-----eEEEeccc--ccccCEEEEccCCCCCCCCCCCCCCCCCe
Q 014990 72 KI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL--RQLYHVVVLAYGAESDRALGIPGEDLIGV 133 (415)
Q Consensus 72 ~~-----------~~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~--~~~~d~lvlAtG~~~~~~~~i~g~~~~~v 133 (415)
.. +...+...++..+++++.+..+. ..+...++ ...||+||+|||+ .|+.|+++|.+.. +
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs-~p~~~~~~g~~~~-v 157 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGS-RPIELPNFKFSNR-I 157 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCE-EECCBTTBCCCSS-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCC-CCCCCCCCCccce-E
Confidence 11 12223455667789988877542 12333333 3589999999999 6777788886543 5
Q ss_pred eechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
.+..++.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++.+++
T Consensus 158 ~~~~~~~~----~---------~~~~~~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~ 203 (455)
T 1ebd_A 158 LDSTGALN----L---------GEVPKSLVVIGGGYIGIELGTAYAN--------------------FG-TKVTILEGAG 203 (455)
T ss_dssp ECHHHHHT----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSS
T ss_pred ecHHHHhc----c---------ccCCCeEEEECCCHHHHHHHHHHHH--------------------cC-CcEEEEEcCC
Confidence 55444331 1 0147999999999999999999986 34 5899999986
Q ss_pred cccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccccc
Q 014990 214 PVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDS 293 (415)
Q Consensus 214 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 293 (415)
.+...+ + +.+...+.+.+. +.||+++++..+.+
T Consensus 204 ~~l~~~-~---------------------------------~~~~~~l~~~l~-------------~~gv~i~~~~~v~~ 236 (455)
T 1ebd_A 204 EILSGF-E---------------------------------KQMAAIIKKRLK-------------KKGVEVVTNALAKG 236 (455)
T ss_dssp SSSTTS-C---------------------------------HHHHHHHHHHHH-------------HTTCEEEESEEEEE
T ss_pred cccccc-C---------------------------------HHHHHHHHHHHH-------------HCCCEEEeCCEEEE
Confidence 542111 1 111122223332 56899999999888
Q ss_pred ccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccC
Q 014990 294 FLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNIS 373 (415)
Q Consensus 294 v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~ 373 (415)
+. . +++.+ .+++.. +|+++++++|.||+|+|++|+. ..+. .+..|+.++++|++.+|++
T Consensus 237 i~--~-~~~~~-~v~~~~---------------~g~~~~~~~D~vv~a~G~~p~~-~~l~-~~~~g~~~~~~G~i~vd~~ 295 (455)
T 1ebd_A 237 AE--E-REDGV-TVTYEA---------------NGETKTIDADYVLVTVGRRPNT-DELG-LEQIGIKMTNRGLIEVDQQ 295 (455)
T ss_dssp EE--E-ETTEE-EEEEEE---------------TTEEEEEEESEEEECSCEEESC-SSSS-TTTTTCCBCTTSCBCCCTT
T ss_pred EE--E-eCCeE-EEEEEe---------------CCceeEEEcCEEEECcCCCccc-CcCC-hhhcCCccCCCCCEeeCCC
Confidence 86 3 22222 233321 3445689999999999999975 1111 3566788888899999987
Q ss_pred CCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 374 GDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 374 ~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 296 --~~t~~~~Iya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 296 --CRTSVPNIFAIGDIVPGPA-LAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp --CBCSSTTEEECGGGSSSCC-CHHHHHHHHHHHHHHHTS
T ss_pred --cccCCCCEEEEeccCCCcc-cHHHHHHHHHHHHHHHcC
Confidence 8899999999999986554 455799999999999864
No 32
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=1e-30 Score=247.69 Aligned_cols=269 Identities=13% Similarity=0.145 Sum_probs=188.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc--cCCCC-CCcchHHHHHHHHHHhhcc-CeEEEeceEe
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR--SGVAP-DHPETKIVINQFSRVVQHE-RCSFFGNVTL 95 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v 95 (415)
++|+|||||+||+++|..|++.+ .+|+|||+.+..+.+.. +.... ......++..++.+.+.+. ++.+..+...
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 80 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRAR--KNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVT 80 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEE
Confidence 68999999999999999999999 99999999865443331 11211 1234557777888888776 6777655433
Q ss_pred c-------eEEEecccc-cccCEEEEccCCCCCCCCCCCCCCC---CCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEE
Q 014990 96 G-------SSVSLSELR-QLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVI 164 (415)
Q Consensus 96 ~-------~~v~~~~~~-~~~d~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~V 164 (415)
. ..+...+.. ..||+||+|||+ .++.|++||.+. ..++++. +.... ...+++|+|
T Consensus 81 ~i~~~~~~~~v~~~~g~~~~~d~vviAtG~-~~~~~~~~g~~~~~~~~~~~~~-~~~~~------------~~~~~~v~v 146 (297)
T 3fbs_A 81 DAKGSFGEFIVEIDGGRRETAGRLILAMGV-TDELPEIAGLRERWGSAVFHCP-YCHGY------------ELDQGKIGV 146 (297)
T ss_dssp EEEEETTEEEEEETTSCEEEEEEEEECCCC-EEECCCCBTTGGGBTTTEESCH-HHHTG------------GGTTCEEEE
T ss_pred EEEEcCCeEEEEECCCCEEEcCEEEECCCC-CCCCCCCCCchhhcCCeeEEcc-cCcch------------hhcCCEEEE
Confidence 2 134444443 579999999999 678888998763 3444332 22111 115899999
Q ss_pred EcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCC
Q 014990 165 LGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIK 244 (415)
Q Consensus 165 VG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 244 (415)
||+|.+|+|+|..|.+ .+ +|+++.++... +. +.+
T Consensus 147 vG~G~~~~e~a~~l~~--------------------~g--~v~~v~~~~~~---~~-~~~-------------------- 180 (297)
T 3fbs_A 147 IAASPMAIHHALMLPD--------------------WG--ETTFFTNGIVE---PD-ADQ-------------------- 180 (297)
T ss_dssp ECCSTTHHHHHHHGGG--------------------TS--EEEEECTTTCC---CC-HHH--------------------
T ss_pred EecCccHHHHHHHhhh--------------------cC--cEEEEECCCCC---CC-HHH--------------------
Confidence 9999999999999986 44 89999887531 11 111
Q ss_pred CCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCccee
Q 014990 245 SPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYA 324 (415)
Q Consensus 245 ~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~ 324 (415)
.+.+. +.||+++. ..+.++. . ++ .+.+.
T Consensus 181 -----------------~~~l~-------------~~gv~i~~-~~v~~i~--~--~~---~v~~~-------------- 208 (297)
T 3fbs_A 181 -----------------HALLA-------------ARGVRVET-TRIREIA--G--HA---DVVLA-------------- 208 (297)
T ss_dssp -----------------HHHHH-------------HTTCEEEC-SCEEEEE--T--TE---EEEET--------------
T ss_pred -----------------HHHHH-------------HCCcEEEc-ceeeeee--c--CC---eEEeC--------------
Confidence 11221 55788875 6777775 3 22 34332
Q ss_pred ccCCceEEEecCeeEEeeccCCccCCCCcccCCCCcccc--CCC-ceeeccCCCCCcccCCeeeeeccccCCccchhhhh
Q 014990 325 VGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPN--IRG-RVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNL 401 (415)
Q Consensus 325 ~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~--~~G-~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~ 401 (415)
+| +++++|.||+|+|++|+. ++....++..+ .+| ++.+|++ ++|+.|||||+|||+..+.. ...|+
T Consensus 209 --~g--~~~~~D~vi~a~G~~p~~----~~~~~~g~~~~~~~~G~~i~vd~~--~~t~~~~vya~GD~~~~~~~-~~~A~ 277 (297)
T 3fbs_A 209 --DG--RSIALAGLFTQPKLRITV----DWIEKLGCAVEEGPMGSTIVTDPM--KQTTARGIFACGDVARPAGS-VALAV 277 (297)
T ss_dssp --TS--CEEEESEEEECCEEECCC----SCHHHHTCCEEEETTEEEECCCTT--CBCSSTTEEECSGGGCTTCC-HHHHH
T ss_pred --CC--CEEEEEEEEEccCcccCc----hhHHhcCCccccCCCCceEEeCCC--CccCCCCEEEEeecCCchHH-HHHHH
Confidence 22 379999999999999965 34444555555 357 8999987 88999999999999875554 44799
Q ss_pred hhHHHHHhhccc
Q 014990 402 YCAEETVSSLSL 413 (415)
Q Consensus 402 ~~g~~~a~~i~~ 413 (415)
.||+.||.+|.+
T Consensus 278 ~~g~~aa~~i~~ 289 (297)
T 3fbs_A 278 GDGAMAGAAAHR 289 (297)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhHHHHHHHHHH
Confidence 999999999865
No 33
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.97 E-value=7.6e-31 Score=265.72 Aligned_cols=288 Identities=17% Similarity=0.214 Sum_probs=197.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-cCCCCCC----------------------------c
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDH----------------------------P 69 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-~~~~~~~----------------------------~ 69 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+. .+..|.+ .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLG--MKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 478999999999999999999999 99999999988876522 1110100 0
Q ss_pred chHHH-----------HHHHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCCCCCCCCCC
Q 014990 70 ETKIV-----------INQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGEDL 130 (415)
Q Consensus 70 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~~~i~g~~~ 130 (415)
....+ ...+...+++.+++++.+..+. ..+...++ ...||+||+|||+ .|+.|+++|.+.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~-~p~~p~~~g~~~ 158 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGS-EPTELPFLPFDE 158 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCE-EECCBTTBCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCC-CcCCCCCCCCCc
Confidence 11111 1123445566788888776542 12333333 3589999999999 678888888776
Q ss_pred CCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEe
Q 014990 131 IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVG 210 (415)
Q Consensus 131 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 210 (415)
+++++..++.. .. ..+++|+|||+|.+|+|+|..|.+ .+ .+|+++.
T Consensus 159 ~~v~t~~~~~~----~~---------~~~~~vvViGgG~~g~E~A~~l~~--------------------~g-~~Vtlv~ 204 (468)
T 2qae_A 159 KVVLSSTGALA----LP---------RVPKTMVVIGGGVIGLELGSVWAR--------------------LG-AEVTVVE 204 (468)
T ss_dssp SSEECHHHHHT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEC
T ss_pred CceechHHHhh----cc---------cCCceEEEECCCHHHHHHHHHHHH--------------------hC-CEEEEEe
Confidence 66776655442 10 147999999999999999999986 34 5899999
Q ss_pred ecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHH-HHHHhccCCCCCCCceeEEEEecc
Q 014990 211 RRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELL-SKAAASASSQPMLGQRELHFVFFR 289 (415)
Q Consensus 211 r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~ 289 (415)
|++.+...+ ++ .+...+.+.+ . +.||+++++.
T Consensus 205 ~~~~~l~~~-d~---------------------------------~~~~~l~~~l~~-------------~~gv~i~~~~ 237 (468)
T 2qae_A 205 FAPRCAPTL-DE---------------------------------DVTNALVGALAK-------------NEKMKFMTST 237 (468)
T ss_dssp SSSSSSTTS-CH---------------------------------HHHHHHHHHHHH-------------HTCCEEECSC
T ss_pred cCCcccccC-CH---------------------------------HHHHHHHHHHhh-------------cCCcEEEeCC
Confidence 987542211 11 1112222333 2 5689999999
Q ss_pred ccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCcee
Q 014990 290 KPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVL 369 (415)
Q Consensus 290 ~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~ 369 (415)
.+.++. . +++.+ .+.+.. .+|+.+++++|.||+|+|++|+. ..+. .+..|+.++++|++.
T Consensus 238 ~v~~i~--~-~~~~~-~v~~~~--------------~~g~~~~i~~D~vv~a~G~~p~~-~~l~-l~~~gl~~~~~G~i~ 297 (468)
T 2qae_A 238 KVVGGT--N-NGDSV-SLEVEG--------------KNGKRETVTCEALLVSVGRRPFT-GGLG-LDKINVAKNERGFVK 297 (468)
T ss_dssp EEEEEE--E-CSSSE-EEEEEC--------------C---EEEEEESEEEECSCEEECC-TTSC-HHHHTCCBCTTSCBC
T ss_pred EEEEEE--E-cCCeE-EEEEEc--------------CCCceEEEECCEEEECCCcccCC-CCCC-chhcCCccCCCCCEe
Confidence 998886 3 22222 333321 02434579999999999999975 1111 234567778789999
Q ss_pred eccCCCCCcccCCeeeeecccc-CCccchhhhhhhHHHHHhhccc
Q 014990 370 KNISGDSSQVENGLYVCGWLKR-GPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 370 v~~~~~~~t~~p~vfaiGD~~~-~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|++ ++|+.|||||+|||+. .+. ....|+.||+.+|.+|..
T Consensus 298 vd~~--~~t~~~~IyA~GD~~~~~~~-~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 298 IGDH--FETSIPDVYAIGDVVDKGPM-LAHKAEDEGVACAEILAG 339 (468)
T ss_dssp CCTT--SBCSSTTEEECGGGBSSSCS-CHHHHHHHHHHHHHHHTT
T ss_pred ECCC--cccCCCCEEEeeccCCCCCc-cHhHHHHHHHHHHHHHcC
Confidence 9987 8899999999999986 444 455799999999999864
No 34
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=7.9e-31 Score=265.69 Aligned_cols=291 Identities=19% Similarity=0.218 Sum_probs=199.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCCC---------------------------
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH--------------------------- 68 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~~--------------------------- 68 (415)
...++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.. +..|.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g--~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLG--FKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVE 81 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCc
Confidence 35789999999999999999999999 999999999878775321 110100
Q ss_pred cchHH-----------HHHHHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCCCCCCCCC
Q 014990 69 PETKI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGED 129 (415)
Q Consensus 69 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~~~i~g~~ 129 (415)
..... +...+...++..+++++.+..+. ..+...++ ...||+||+|||+ .|+.|+++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs-~p~~p~~~g~~ 160 (470)
T 1dxl_A 82 IDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGS-DVKSLPGVTID 160 (470)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCE-EECCBTTBCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCC-CCCCCCCCCCC
Confidence 00111 11123445556688888776542 12322232 3579999999999 67878888876
Q ss_pred CCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEE
Q 014990 130 LIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLV 209 (415)
Q Consensus 130 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 209 (415)
.+++++..++.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++
T Consensus 161 ~~~v~~~~~~~~----~---------~~~~~~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtli 206 (470)
T 1dxl_A 161 EKKIVSSTGALA----L---------SEIPKKLVVIGAGYIGLEMGSVWGR--------------------IG-SEVTVV 206 (470)
T ss_dssp SSSEECHHHHTT----C---------SSCCSEEEESCCSHHHHHHHHHHHH--------------------HT-CEEEEE
T ss_pred cccEEeHHHhhh----h---------hhcCCeEEEECCCHHHHHHHHHHHH--------------------cC-CcEEEE
Confidence 556666544331 1 1147999999999999999999985 34 589999
Q ss_pred eecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecc
Q 014990 210 GRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFR 289 (415)
Q Consensus 210 ~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~ 289 (415)
.|++.+...+ ++ .+...+.+.+. +.||+++++.
T Consensus 207 ~~~~~~l~~~-~~---------------------------------~~~~~l~~~l~-------------~~gv~i~~~~ 239 (470)
T 1dxl_A 207 EFASEIVPTM-DA---------------------------------EIRKQFQRSLE-------------KQGMKFKLKT 239 (470)
T ss_dssp CSSSSSSTTS-CH---------------------------------HHHHHHHHHHH-------------HSSCCEECSE
T ss_pred EcCCcccccc-cH---------------------------------HHHHHHHHHHH-------------HcCCEEEeCC
Confidence 9986542211 11 11112222332 5689999999
Q ss_pred ccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCcee
Q 014990 290 KPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVL 369 (415)
Q Consensus 290 ~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~ 369 (415)
.+.++. . +++.+ .+++.+. .+|+++++++|.||+|+|++|+. ..+. ....|+.++++|++.
T Consensus 240 ~v~~i~--~-~~~~~-~v~~~~~-------------~~g~~~~~~~D~vv~a~G~~p~~-~~l~-~~~~gl~~~~~G~i~ 300 (470)
T 1dxl_A 240 KVVGVD--T-SGDGV-KLTVEPS-------------AGGEQTIIEADVVLVSAGRTPFT-SGLN-LDKIGVETDKLGRIL 300 (470)
T ss_dssp EEEEEE--C-SSSSE-EEEEEES-------------SSCCCEEEEESEEECCCCEEECC-TTSC-CTTTTCCBCSSSCBC
T ss_pred EEEEEE--E-cCCeE-EEEEEec-------------CCCcceEEECCEEEECCCCCcCC-CCCC-chhcCCccCCCCCEe
Confidence 999987 3 22222 3443320 02334589999999999999975 1111 356678888889999
Q ss_pred eccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 370 KNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 370 v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|++ ++|+.|||||+|||+..+. ....|+.||+.||.+|..
T Consensus 301 vd~~--~~t~~~~Iya~GD~~~~~~-~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 301 VNER--FSTNVSGVYAIGDVIPGPM-LAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CCTT--CBCSSTTEEECSTTSSSCC-CHHHHHHHHHHHHHHHTT
T ss_pred ECcC--CccCCCCEEEEeccCCCCc-cHHHHHHHHHHHHHHHcC
Confidence 9987 8899999999999986544 455799999999999864
No 35
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.97 E-value=4.6e-32 Score=267.66 Aligned_cols=272 Identities=15% Similarity=0.171 Sum_probs=186.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc-cc-cCCCCCCcchHHHHHHHHHHhhccCeEEEeceEe
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-VR-SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
++++|+|||||+||++||..|.+.+ .+|+|||+++.++.. .. ....++.....++..+..+.+++.+++++.++.+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~--~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V 85 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKC--DDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFA 85 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTC--SCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCC--CEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEE
Confidence 5778999999999999999995555 999999999875421 00 0001122222333333445556678999888655
Q ss_pred c------eEEEecccc-cccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCCCCCCCCCeEEEEc
Q 014990 96 G------SSVSLSELR-QLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLSPDLKSTDTAVILG 166 (415)
Q Consensus 96 ~------~~v~~~~~~-~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~k~V~VVG 166 (415)
. +.++++++. ..||+||||||+ .|+.|++||.+ ++++...+.. .+... +..+++|+|||
T Consensus 86 ~~id~~~~~v~~~~g~~~~yd~lvlAtG~-~p~~p~i~G~~--~v~~~~~~~d~~~l~~~---------l~~~~~vvVIG 153 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGEKIKYEKLIIASGS-IANKIKVPHAD--EIFSLYSYDDALKIKDE---------CKNKGKAFIIG 153 (385)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCE-EECCCCCTTCS--CEECCSSHHHHHHHHHH---------HHHHSCEEEEC
T ss_pred EEEECCCCEEEECCCCEEECCEEEEecCC-CcCCCCCCCCC--CeEEeCCHHHHHHHHHH---------hhcCCeEEEEC
Confidence 2 245555553 589999999999 78888999987 6665433222 11110 11378999999
Q ss_pred CChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCC
Q 014990 167 QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSP 246 (415)
Q Consensus 167 ~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p 246 (415)
+|.+|+|+|..|.+ .+ .+|+++.|++.+.....++++
T Consensus 154 gG~~g~E~A~~l~~--------------------~g-~~Vtvv~~~~~~l~~~~~~~~---------------------- 190 (385)
T 3klj_A 154 GGILGIELAQAIID--------------------SG-TPASIGIILEYPLERQLDRDG---------------------- 190 (385)
T ss_dssp CSHHHHHHHHHHHH--------------------HT-CCEEEECSSSSSCTTTSCHHH----------------------
T ss_pred CCHHHHHHHHHHHh--------------------CC-CeEEEEEcCCccchhhcCHHH----------------------
Confidence 99999999999986 23 589999998765332222211
Q ss_pred CcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceecc
Q 014990 247 TDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVG 326 (415)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~ 326 (415)
...+.+.+. +.||+++++..+.++
T Consensus 191 -----------~~~~~~~l~-------------~~gV~~~~~~~v~~i-------------------------------- 214 (385)
T 3klj_A 191 -----------GLFLKDKLD-------------RLGIKIYTNSNFEEM-------------------------------- 214 (385)
T ss_dssp -----------HHHHHHHHH-------------TTTCEEECSCCGGGC--------------------------------
T ss_pred -----------HHHHHHHHH-------------hCCCEEEeCCEEEEc--------------------------------
Confidence 111222222 557887776544332
Q ss_pred CCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCC---ccchhhhhhh
Q 014990 327 TGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGP---TGIIATNLYC 403 (415)
Q Consensus 327 ~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~---~~~~~~a~~~ 403 (415)
+++++||+||+|+|++|+. ++....++..+ +| +.+|++ ++|+.|+|||+|||+..+ .+....|+.|
T Consensus 215 ---g~~~~~D~vv~a~G~~p~~----~~~~~~gl~~~-~g-i~vd~~--~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~q 283 (385)
T 3klj_A 215 ---GDLIRSSCVITAVGVKPNL----DFIKDTEIASK-RG-ILVNDH--METSIKDIYACGDVAEFYGKNPGLINIANKQ 283 (385)
T ss_dssp ---HHHHHHSEEEECCCEEECC----GGGTTSCCCBS-SS-EEECTT--CBCSSTTEEECGGGEEETTBCCCCHHHHHHH
T ss_pred ---CeEEecCeEEECcCcccCh----hhhhhcCCCcC-CC-EEECCC--cccCCCCEEEEEeeEecCCCcccHHHHHHHH
Confidence 1158899999999999975 45566677765 46 889986 899999999999998522 3445689999
Q ss_pred HHHHHhhccc
Q 014990 404 AEETVSSLSL 413 (415)
Q Consensus 404 g~~~a~~i~~ 413 (415)
|+.||.+|..
T Consensus 284 g~~aa~~i~g 293 (385)
T 3klj_A 284 GEVAGLNACG 293 (385)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999999874
No 36
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.97 E-value=6.6e-30 Score=259.34 Aligned_cols=288 Identities=14% Similarity=0.210 Sum_probs=196.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC--------------------------------CC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG--------------------------------VA 65 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~--------------------------------~~ 65 (415)
..++|+|||||+||+++|..|++.| .+|+|||+.+.+||...++ +.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~ 79 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLG--LKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIS 79 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHT--CCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC--CEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 5689999999999999999999999 9999999987433322111 10
Q ss_pred CC--CcchHH-----------HHHHHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCCCC
Q 014990 66 PD--HPETKI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALG 124 (415)
Q Consensus 66 ~~--~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~~~ 124 (415)
.. ...... +...+...++..+++++.+.... ..+...++ ...||+||+|||+ .|..|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~-~p~~~~ 158 (476)
T 3lad_A 80 TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGS-KPVEIP 158 (476)
T ss_dssp CSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCE-EECCCT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCC-CCCCCC
Confidence 00 000111 11122344556688888776542 12333333 3589999999999 666666
Q ss_pred CCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcc
Q 014990 125 IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR 204 (415)
Q Consensus 125 i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (415)
.++.+...++++.++.. . ...+++|+|||+|++|+|+|..|.+ .+ .
T Consensus 159 ~~~~~~~~v~~~~~~~~----~---------~~~~~~v~ViGgG~~g~e~A~~l~~--------------------~g-~ 204 (476)
T 3lad_A 159 PAPVDQDVIVDSTGALD----F---------QNVPGKLGVIGAGVIGLELGSVWAR--------------------LG-A 204 (476)
T ss_dssp TSCCCSSSEEEHHHHTS----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-C
T ss_pred CCCCCcccEEechhhhc----c---------ccCCCeEEEECCCHHHHHHHHHHHH--------------------cC-C
Confidence 66666667777655432 1 1157899999999999999999986 34 5
Q ss_pred eEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEE
Q 014990 205 KVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELH 284 (415)
Q Consensus 205 ~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~ 284 (415)
+|+++.|++.+...+.. .+...+.+.+. +.||+
T Consensus 205 ~Vtlv~~~~~~l~~~~~----------------------------------~~~~~l~~~l~-------------~~Gv~ 237 (476)
T 3lad_A 205 EVTVLEAMDKFLPAVDE----------------------------------QVAKEAQKILT-------------KQGLK 237 (476)
T ss_dssp EEEEEESSSSSSTTSCH----------------------------------HHHHHHHHHHH-------------HTTEE
T ss_pred cEEEEecCCCcCcccCH----------------------------------HHHHHHHHHHH-------------hCCCE
Confidence 89999998754321111 11112222332 56899
Q ss_pred EEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccC
Q 014990 285 FVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNI 364 (415)
Q Consensus 285 ~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~ 364 (415)
++++..+.++. . +++.+ .+.+.+. .| .+++++|.||+|+|++|+.. .+ .....++.+++
T Consensus 238 v~~~~~v~~i~--~-~~~~~-~v~~~~~--------------~g-~~~~~~D~vi~a~G~~p~~~-~l-~~~~~g~~~~~ 296 (476)
T 3lad_A 238 ILLGARVTGTE--V-KNKQV-TVKFVDA--------------EG-EKSQAFDKLIVAVGRRPVTT-DL-LAADSGVTLDE 296 (476)
T ss_dssp EEETCEEEEEE--E-CSSCE-EEEEESS--------------SE-EEEEEESEEEECSCEEECCT-TC-CSSCCSCCBCT
T ss_pred EEECCEEEEEE--E-cCCEE-EEEEEeC--------------CC-cEEEECCEEEEeeCCcccCC-CC-CccccCccccC
Confidence 99999999886 3 23332 3444320 22 35899999999999999762 11 24567888888
Q ss_pred CCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 365 RGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 365 ~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|++.+|+. ++|+.|||||+|||+.++. ....|+.||+.+|.+|..
T Consensus 297 ~G~i~vd~~--~~t~~~~Iya~GD~~~~~~-~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 297 RGFIYVDDY--CATSVPGVYAIGDVVRGAM-LAHKASEEGVVVAERIAG 342 (476)
T ss_dssp TSCBCCCTT--SBCSSTTEEECGGGSSSCC-CHHHHHHHHHHHHHHHHH
T ss_pred CCCEeeCCC--cccCCCCEEEEEccCCCcc-cHHHHHHHHHHHHHHhcC
Confidence 999999987 7899999999999986555 455799999999999864
No 37
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.97 E-value=4.3e-31 Score=267.26 Aligned_cols=285 Identities=15% Similarity=0.166 Sum_probs=193.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-cCCCCC-------------------C-------cch
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPD-------------------H-------PET 71 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-~~~~~~-------------------~-------~~~ 71 (415)
.++|+|||||+||+++|..|++.| .+|+|||+. .+||... .+..|. + ...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G--~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLG--LSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 468999999999999999999999 999999998 4554321 110010 0 001
Q ss_pred HH-----------HHHHHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCCCCCCCCCCCC
Q 014990 72 KI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGEDLIG 132 (415)
Q Consensus 72 ~~-----------~~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~~~i~g~~~~~ 132 (415)
.. +...+.+.+++.+++++.++.+. ..+...++ ...||+||+|||+ .|+.|+++|.+..
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~-~~~~~~~~g~~~~- 157 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGS-STRLVPGTSLSAN- 157 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCE-EECCCTTCCCBTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCC-CCCCCCCCCCCce-
Confidence 11 11223455666789888776541 12333333 3579999999999 6777788886543
Q ss_pred eeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeec
Q 014990 133 VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (415)
Q Consensus 133 v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~ 212 (415)
+.+..++.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|+
T Consensus 158 ~~~~~~~~~----~---------~~~~~~vvViGgG~~g~E~A~~l~~--------------------~g-~~Vtlv~~~ 203 (464)
T 2a8x_A 158 VVTYEEQIL----S---------RELPKSIIIAGAGAIGMEFGYVLKN--------------------YG-VDVTIVEFL 203 (464)
T ss_dssp EECHHHHHT----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSS
T ss_pred EEecHHHhh----c---------cccCCeEEEECCcHHHHHHHHHHHH--------------------cC-CeEEEEEcC
Confidence 555444331 1 0147899999999999999999986 34 589999998
Q ss_pred CcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccc
Q 014990 213 GPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPD 292 (415)
Q Consensus 213 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (415)
+.+...+ +++ +...+.+.+. +.||+++++..+.
T Consensus 204 ~~~l~~~-~~~---------------------------------~~~~l~~~l~-------------~~gv~i~~~~~v~ 236 (464)
T 2a8x_A 204 PRALPNE-DAD---------------------------------VSKEIEKQFK-------------KLGVTILTATKVE 236 (464)
T ss_dssp SSSSTTS-CHH---------------------------------HHHHHHHHHH-------------HHTCEEECSCEEE
T ss_pred Ccccccc-CHH---------------------------------HHHHHHHHHH-------------HcCCEEEeCcEEE
Confidence 7542211 111 1112223332 5689999999998
Q ss_pred cccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeecc
Q 014990 293 SFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNI 372 (415)
Q Consensus 293 ~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~ 372 (415)
++. . +++.+ .+.+.. +|+.+++++|.||+|+|++|+. ..+. ....|+.++++|++.+|+
T Consensus 237 ~i~--~-~~~~~-~v~~~~---------------~g~~~~~~~D~vv~a~G~~p~~-~~l~-~~~~gl~~~~~G~i~vd~ 295 (464)
T 2a8x_A 237 SIA--D-GGSQV-TVTVTK---------------DGVAQELKAEKVLQAIGFAPNV-EGYG-LDKAGVALTDRKAIGVDD 295 (464)
T ss_dssp EEE--E-CSSCE-EEEEES---------------SSCEEEEEESEEEECSCEEECC-SSSC-HHHHTCCBCTTSSBCCCT
T ss_pred EEE--E-cCCeE-EEEEEc---------------CCceEEEEcCEEEECCCCCccC-CCCC-chhcCCccCCCCCEeECc
Confidence 886 3 22222 233321 3444589999999999999975 1111 244567778789999998
Q ss_pred CCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 373 SGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 373 ~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+ ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 296 ~--~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 296 Y--MRTNVGHIYAIGDVNGLLQ-LAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp T--SBCSSTTEEECGGGGCSSC-SHHHHHHHHHHHHHHHHT
T ss_pred C--CccCCCCEEEeECcCCCcc-CHHHHHHHHHHHHHHhcC
Confidence 7 7899999999999986554 455799999999999864
No 38
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=3.1e-30 Score=250.54 Aligned_cols=310 Identities=14% Similarity=0.122 Sum_probs=186.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC-------------CCC---------CcchHHHHH
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------------APD---------HPETKIVIN 76 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~-------------~~~---------~~~~~~~~~ 76 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.+.. .+. +....++..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g--~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSG--LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSS--CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 478999999999999999999999 99999999988887654311 011 112256777
Q ss_pred HHHHHhhccCeEEEeceEece--------E-EEecccccccCEEEEccCC-CCCCCCCCCCCCC--CCeeechhhHHHhc
Q 014990 77 QFSRVVQHERCSFFGNVTLGS--------S-VSLSELRQLYHVVVLAYGA-ESDRALGIPGEDL--IGVHSAREFVWWYN 144 (415)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~v~~--------~-v~~~~~~~~~d~lvlAtG~-~~~~~~~i~g~~~--~~v~~~~~~~~~~~ 144 (415)
++.+.++..+++++.++.+.. . ++.++....||+||+|||+ ..+..|++||.+. ....+...+...
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 158 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTP-- 158 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCS--
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCCh--
Confidence 888888888888888765521 2 4445555689999999997 3566788888652 123333222210
Q ss_pred CCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC-cccCCC-CHH
Q 014990 145 GHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG-PVQAAC-TAK 222 (415)
Q Consensus 145 ~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~-~~~~~~-~~~ 222 (415)
....+++|+|||+|.+|+|+|..|.+ .+ +|+++.|+. .+.... ...
T Consensus 159 ----------~~~~~~~v~VvG~G~~g~e~a~~l~~--------------------~~--~v~~v~~~~~~~~~~~~~~~ 206 (357)
T 4a9w_A 159 ----------APFAGMRVAIIGGGNSGAQILAEVST--------------------VA--ETTWITQHEPAFLADDVDGR 206 (357)
T ss_dssp ----------GGGTTSEEEEECCSHHHHHHHHHHTT--------------------TS--EEEEECSSCCCBCCTTCCTH
T ss_pred ----------hhcCCCEEEEECCCcCHHHHHHHHHh--------------------hC--CEEEEECCCCeecchhhcCc
Confidence 11268999999999999999999996 34 599999884 321111 111
Q ss_pred HHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCC
Q 014990 223 ELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSG 302 (415)
Q Consensus 223 ~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~ 302 (415)
.+.+.+... +. ......+...+. .......+.....+.+ ..++ +.....+.++. . +
T Consensus 207 ~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--------------~~g~-i~~~~~v~~~~--~--~- 262 (357)
T 4a9w_A 207 VLFERATER-WK-AQQEGREPDLPP--GGFGDIVMVPPVLDAR--------------ARGV-LAAVPPPARFS--P--T- 262 (357)
T ss_dssp HHHTC--------------------------CBCCCHHHHHHH--------------HTTC-CCEECCCSEEE--T--T-
T ss_pred cHHHHHHHH-Hh-ccccccCCCccc--ccccCcccChhHHHHH--------------hcCc-eEEecCcceEe--C--C-
Confidence 111100000 00 000000000000 0000000000000000 0111 11122222221 0 0
Q ss_pred CeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCC
Q 014990 303 HVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENG 382 (415)
Q Consensus 303 ~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~ 382 (415)
.+. ..++++++||+||||+|++|+. +|....++. +++|++.+|+.+.++|+.||
T Consensus 263 ---~v~------------------~~~g~~i~~D~vi~a~G~~p~~----~~l~~~gl~-~~~G~i~vd~~~l~~t~~~~ 316 (357)
T 4a9w_A 263 ---GMQ------------------WADGTERAFDAVIWCTGFRPAL----SHLKGLDLV-TPQGQVEVDGSGLRALAVPS 316 (357)
T ss_dssp ---EEE------------------CTTSCEEECSEEEECCCBCCCC----GGGTTTTCB-CTTSCBCBCTTSCBBSSCTT
T ss_pred ---eeE------------------ECCCCEecCCEEEECCCcCCCC----cccCccccc-CCCCCccccCCcccCCCCCC
Confidence 111 1122479999999999999975 466677777 77899999997227899999
Q ss_pred eeeee--ccccCCccchhhhhhhHHHHHhhcccc
Q 014990 383 LYVCG--WLKRGPTGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 383 vfaiG--D~~~~~~~~~~~a~~~g~~~a~~i~~~ 414 (415)
|||+| ||+.........|+.||+.+|.+|.+.
T Consensus 317 vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 317 VWLLGYGDWNGMASATLIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp EEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHH
T ss_pred eEEeccccccccchhhhhhhHHHHHHHHHHHHHH
Confidence 99999 666533444447999999999998764
No 39
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.97 E-value=2.4e-32 Score=278.52 Aligned_cols=320 Identities=14% Similarity=0.131 Sum_probs=192.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCC-ccccCCCCCCcchHHHHHHHHHHh--hccCeEEEec
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG-LVRSGVAPDHPETKIVINQFSRVV--QHERCSFFGN 92 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 92 (415)
.+.+++|||||||+||+++|..|++.+ ++|+|||+++++.- .+.+.+..+...+.++..++.... +..+++|+.+
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~--~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~ 116 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKK--YNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA 116 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTT--CEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCC--CcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE
Confidence 446789999999999999999999887 99999999976322 222333233333333333333332 3446888776
Q ss_pred eEece-----EEEec---------------------ccccccCEEEEccCCCCCCCCCCCCCC-----CCCeeechhhHH
Q 014990 93 VTLGS-----SVSLS---------------------ELRQLYHVVVLAYGAESDRALGIPGED-----LIGVHSAREFVW 141 (415)
Q Consensus 93 ~~v~~-----~v~~~---------------------~~~~~~d~lvlAtG~~~~~~~~i~g~~-----~~~v~~~~~~~~ 141 (415)
..... .++++ ..+..||+||||||+ .+..+++||.+ ...+.++..+..
T Consensus 117 ~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs-~~~~~~ipG~~e~a~~l~t~~dA~~ir~ 195 (502)
T 4g6h_A 117 EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA-EPNTFGIPGVTDYGHFLKEIPNSLEIRR 195 (502)
T ss_dssp EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC-EECCTTCTTHHHHCEECSSHHHHHHHHH
T ss_pred EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc-ccccCCccCcccccCCCCCHHHHHHHHH
Confidence 55422 23221 123479999999999 78888999964 222223333322
Q ss_pred HhcCCCCC----CCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccC
Q 014990 142 WYNGHPDG----KNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (415)
Q Consensus 142 ~~~~~~~~----~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~ 217 (415)
.+....+. ....+......+++|||+|++|+|+|.+|.+... ..+..+. ... ....+|+++.+.+.+..
T Consensus 196 ~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~----~~l~~~~-~~~--~~~~~V~lve~~~~il~ 268 (502)
T 4g6h_A 196 TFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVH----QDLRKFL-PAL--AEEVQIHLVEALPIVLN 268 (502)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHH----HTHHHHC-HHH--HHHCEEEEECSSSSSST
T ss_pred HHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHH----HHHHhhc-ccc--cccceeEEecccccccc
Confidence 22100000 0000000123589999999999999999985110 0000000 000 01247999988876533
Q ss_pred CCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccccccccc
Q 014990 218 ACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLES 297 (415)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~ 297 (415)
.+.. .+.....+.|. +.||+++++..+.++.
T Consensus 269 ~~~~----------------------------------~~~~~~~~~L~-------------~~GV~v~~~~~v~~v~-- 299 (502)
T 4g6h_A 269 MFEK----------------------------------KLSSYAQSHLE-------------NTSIKVHLRTAVAKVE-- 299 (502)
T ss_dssp TSCH----------------------------------HHHHHHHHHHH-------------HTTCEEETTEEEEEEC--
T ss_pred CCCH----------------------------------HHHHHHHHHHH-------------hcceeeecCceEEEEe--
Confidence 2221 12222333333 6689999999998885
Q ss_pred CCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCC
Q 014990 298 NERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSS 377 (415)
Q Consensus 298 ~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~ 377 (415)
. ++ +.+.... .+| ...++++++|+||||+|.+|++... .+....+...+.+|++.||++ ++
T Consensus 300 ~--~~----~~~~~~~----~dg------~~~~~~i~ad~viwa~Gv~~~~~~~-~l~~~~~~~~~~~g~I~Vd~~--lq 360 (502)
T 4g6h_A 300 E--KQ----LLAKTKH----EDG------KITEETIPYGTLIWATGNKARPVIT-DLFKKIPEQNSSKRGLAVNDF--LQ 360 (502)
T ss_dssp S--SE----EEEEEEC----TTS------CEEEEEEECSEEEECCCEECCHHHH-HHHHHSGGGTTCCSSEEBCTT--SB
T ss_pred C--Cc----eEEEEEe----cCc------ccceeeeccCEEEEccCCcCCHHHH-hHHHhccccccCCCceeECCc--cc
Confidence 2 32 2222110 011 1234589999999999999974210 122233455677799999987 55
Q ss_pred c-ccCCeeeeeccccCC-ccchhhhhhhHHHHHhhccc
Q 014990 378 Q-VENGLYVCGWLKRGP-TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 378 t-~~p~vfaiGD~~~~~-~~~~~~a~~~g~~~a~~i~~ 413 (415)
+ ++|||||+|||+..+ ......|+.||+.+|+||.+
T Consensus 361 ~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 361 VKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp BTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 5 899999999998533 34556799999999999864
No 40
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.97 E-value=2.7e-30 Score=263.21 Aligned_cols=289 Identities=23% Similarity=0.296 Sum_probs=192.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc--------------------------cCCCCCCc-
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR--------------------------SGVAPDHP- 69 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~--------------------------~~~~~~~~- 69 (415)
+..++|+||||||||+++|..|++.| .+|+|||+.+.+||.+. +++.....
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLG--MKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPK 100 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCc
Confidence 34689999999999999999999999 99999999988887422 11100000
Q ss_pred -chHH-----------HHHHHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCCCCCCCCC
Q 014990 70 -ETKI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGED 129 (415)
Q Consensus 70 -~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~~~i~g~~ 129 (415)
.... +...+...++..+++++.+.... ..+...++ ...||+||||||+. | +++||.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~-p--~~ipg~~ 177 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSD-V--AGIPGVE 177 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEE-C--CCBTTBC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCC-C--CCCCCcc
Confidence 0111 11123344566788887776541 12333332 35799999999984 3 4566654
Q ss_pred ----CCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcce
Q 014990 130 ----LIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRK 205 (415)
Q Consensus 130 ----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (415)
...++++.+... . ...+++|+|||+|.+|+|+|..|.+ .+ .+
T Consensus 178 ~~~~~~~~~~~~~~~~----~---------~~~~~~vvViGgG~~g~E~A~~l~~--------------------~g-~~ 223 (491)
T 3urh_A 178 VAFDEKTIVSSTGALA----L---------EKVPASMIVVGGGVIGLELGSVWAR--------------------LG-AK 223 (491)
T ss_dssp CCCCSSSEECHHHHTS----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------HT-CE
T ss_pred cccCCeeEEehhHhhh----h---------hhcCCeEEEECCCHHHHHHHHHHHH--------------------cC-CE
Confidence 233444332221 1 1257999999999999999999986 34 58
Q ss_pred EEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEE
Q 014990 206 VYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHF 285 (415)
Q Consensus 206 v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~ 285 (415)
|+++.+++.+...+.. + +...+.+.+. +.||++
T Consensus 224 Vtlv~~~~~~l~~~d~-~---------------------------------~~~~l~~~l~-------------~~gV~v 256 (491)
T 3urh_A 224 VTVVEFLDTILGGMDG-E---------------------------------VAKQLQRMLT-------------KQGIDF 256 (491)
T ss_dssp EEEECSSSSSSSSSCH-H---------------------------------HHHHHHHHHH-------------HTTCEE
T ss_pred EEEEeccccccccCCH-H---------------------------------HHHHHHHHHH-------------hCCCEE
Confidence 9999988754322111 1 1112222232 568999
Q ss_pred EeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCC
Q 014990 286 VFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIR 365 (415)
Q Consensus 286 ~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~ 365 (415)
+++..+.++. . ++....+.+.+. .+|+.+++++|.||+|+|++|+. ..+. ....++.++++
T Consensus 257 ~~~~~v~~i~--~--~~~~~~v~~~~~-------------~~g~~~~i~~D~Vi~a~G~~p~~-~~l~-l~~~g~~~~~~ 317 (491)
T 3urh_A 257 KLGAKVTGAV--K--SGDGAKVTFEPV-------------KGGEATTLDAEVVLIATGRKPST-DGLG-LAKAGVVLDSR 317 (491)
T ss_dssp ECSEEEEEEE--E--ETTEEEEEEEET-------------TSCCCEEEEESEEEECCCCEECC-TTSC-HHHHTCCBCTT
T ss_pred EECCeEEEEE--E--eCCEEEEEEEec-------------CCCceEEEEcCEEEEeeCCccCC-CccC-chhcCceECCC
Confidence 9999888886 3 332223444331 02444689999999999999975 2111 23456778888
Q ss_pred CceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 366 GRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 366 G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
|++.+|+. ++|+.|||||+|||+.++. ....|+.||+.+|.+|..
T Consensus 318 G~i~vd~~--~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 318 GRVEIDRH--FQTSIAGVYAIGDVVRGPM-LAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp SCBCCCTT--CBCSSTTEEECGGGSSSCC-CHHHHHHHHHHHHHHHTT
T ss_pred CCEeECCC--CCCCCCCEEEEEecCCCcc-chhHHHHHHHHHHHHHcC
Confidence 99999987 8899999999999986664 455799999999999864
No 41
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=1.6e-30 Score=262.20 Aligned_cols=287 Identities=14% Similarity=0.178 Sum_probs=194.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC---CCCCc---chHHHHHHHHHHhhccCeEEEece
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDHP---ETKIVINQFSRVVQHERCSFFGNV 93 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
++|+|||||+||+++|..|++.+++.+|+|||+++.++... .++ ..+.. .+.++.....+.+++.+++++.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 79 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLS-CGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRH 79 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCG-GGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccc-ccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCC
Confidence 58999999999999999999994449999999988654321 110 00110 122222222334556688887776
Q ss_pred Eec------eEEEecc------cccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHH--hcCCCCCCCCCCCCCCC
Q 014990 94 TLG------SSVSLSE------LRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWW--YNGHPDGKNLSPDLKST 159 (415)
Q Consensus 94 ~v~------~~v~~~~------~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~ 159 (415)
.+. ..+.+.+ ....||+||+|||+ .|+.|++||.+.+++++...+... +... ...+
T Consensus 80 ~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs-~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~---------~~~~ 149 (452)
T 2cdu_A 80 QVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGS-KPTVPPIPGIDSSRVYLCKNYNDAKKLFEE---------APKA 149 (452)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCTTTTSTTEEECSSHHHHHHHHHH---------GGGC
T ss_pred EEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCC-CcCCCCCCCCCCCCEEEeCcHHHHHHHHHH---------hccC
Confidence 542 2233322 23589999999998 788889999887777765433221 1100 1257
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRE 239 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 239 (415)
++|+|||+|.+|+|+|..|.+ .+ .+|+++.+++.+.....++++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~~~~~--------------- 193 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSN--------------------QN-YNVNLIDGHERVLYKYFDKEF--------------- 193 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHT--------------------TT-CEEEEEESSSSTTTTTSCHHH---------------
T ss_pred CeEEEECcCHHHHHHHHHHHh--------------------cC-CEEEEEEcCCchhhhhhhhhH---------------
Confidence 999999999999999999986 34 589999998754321122111
Q ss_pred cccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCC
Q 014990 240 DDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGP 319 (415)
Q Consensus 240 ~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~ 319 (415)
...+.+.+. +.||+++++..+.++. . .++.+..+..
T Consensus 194 ------------------~~~l~~~l~-------------~~Gv~i~~~~~v~~i~--~-~~~~v~~v~~---------- 229 (452)
T 2cdu_A 194 ------------------TDILAKDYE-------------AHGVNLVLGSKVAAFE--E-VDDEIITKTL---------- 229 (452)
T ss_dssp ------------------HHHHHHHHH-------------HTTCEEEESSCEEEEE--E-ETTEEEEEET----------
T ss_pred ------------------HHHHHHHHH-------------HCCCEEEcCCeeEEEE--c-CCCeEEEEEe----------
Confidence 112222332 5689999999998886 3 2443322211
Q ss_pred CcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCC------
Q 014990 320 GKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGP------ 393 (415)
Q Consensus 320 g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~------ 393 (415)
+| +++++|.||+|+|++|+. ++.+.. +.++++|++.+|++ ++|+.|||||+|||+..+
T Consensus 230 -------~g--~~i~~D~vv~a~G~~p~~----~ll~~~-l~~~~~G~i~Vd~~--~~t~~~~IyA~GD~~~~~~~~~g~ 293 (452)
T 2cdu_A 230 -------DG--KEIKSDIAILCIGFRPNT----ELLKGK-VAMLDNGAIITDEY--MHSSNRDIFAAGDSAAVHYNPTNS 293 (452)
T ss_dssp -------TS--CEEEESEEEECCCEEECC----GGGTTT-SCBCTTSCBCCCTT--SBCSSTTEEECSTTBCEEETTTTE
T ss_pred -------CC--CEEECCEEEECcCCCCCH----HHHHHh-hhcCCCCCEEECCC--cCcCCCCEEEcceEEEeccccCCC
Confidence 22 379999999999999976 344444 66778899999997 889999999999998632
Q ss_pred ---ccchhhhhhhHHHHHhhccc
Q 014990 394 ---TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 394 ---~~~~~~a~~~g~~~a~~i~~ 413 (415)
......|+.||+.+|.+|..
T Consensus 294 ~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 294 NAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp EECCCCHHHHHHHHHHHHHTSSS
T ss_pred eeecchHHHHHHHHHHHHHHhCC
Confidence 13456899999999999874
No 42
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.97 E-value=1.1e-30 Score=264.95 Aligned_cols=292 Identities=17% Similarity=0.160 Sum_probs=186.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC---CCCC-cchHH-------HHHHHHHHhhccCe
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDH-PETKI-------VINQFSRVVQHERC 87 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~---~~~~-~~~~~-------~~~~~~~~~~~~~~ 87 (415)
+++|+|||||+||+++|..|++.+++.+|+|||+++.++.. ..+. ..+. ....+ +..+...+.+..++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~-~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi 81 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG-GCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDV 81 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--------------------------------------------C
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccc-ccccchhhcCCCCchHHhccccchhccCHHHHhhhcCc
Confidence 57999999999999999999999555999999999875421 1111 0111 11111 23334444445678
Q ss_pred EEEeceEece------EEEecc---c---ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCC
Q 014990 88 SFFGNVTLGS------SVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLS 153 (415)
Q Consensus 88 ~~~~~~~v~~------~v~~~~---~---~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~ 153 (415)
.++.+..+.. .+.+.. + ...||+||+|||+ .|+.|++||.+.+++++...... .+.....
T Consensus 82 ~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~----- 155 (472)
T 3iwa_A 82 EALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS-KANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS----- 155 (472)
T ss_dssp EEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCSCTTTTSBTEEECCSHHHHHHHHHHCC-----
T ss_pred EEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC-CcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh-----
Confidence 8877766522 233322 2 3479999999999 78888999988777766443221 1211000
Q ss_pred CCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCe
Q 014990 154 PDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNL 233 (415)
Q Consensus 154 ~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~ 233 (415)
...+++|+|||+|.+|+|+|..|.+ ....+|+++.|++.+.....++++
T Consensus 156 --~~~~~~vvViGgG~~g~e~A~~l~~--------------------~~g~~Vtlv~~~~~~l~~~~~~~~--------- 204 (472)
T 3iwa_A 156 --AGEVSKAVIVGGGFIGLEMAVSLAD--------------------MWGIDTTVVELADQIMPGFTSKSL--------- 204 (472)
T ss_dssp --TTSCSEEEEECCSHHHHHHHHHHHH--------------------HHCCEEEEECSSSSSSTTTSCHHH---------
T ss_pred --cCCCCEEEEECCCHHHHHHHHHHHH--------------------hcCCcEEEEEccCcccccccCHHH---------
Confidence 0147999999999999999999985 303589999998754321111111
Q ss_pred eEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeee
Q 014990 234 YVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTA 313 (415)
Q Consensus 234 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~ 313 (415)
...+.+.+. +.||+++++..+.++. . +++.+. +.+.
T Consensus 205 ------------------------~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~-~~~~v~-v~~~--- 240 (472)
T 3iwa_A 205 ------------------------SQMLRHDLE-------------KNDVVVHTGEKVVRLE--G-ENGKVA-RVIT--- 240 (472)
T ss_dssp ------------------------HHHHHHHHH-------------HTTCEEECSCCEEEEE--E-SSSBEE-EEEE---
T ss_pred ------------------------HHHHHHHHH-------------hcCCEEEeCCEEEEEE--c-cCCeEE-EEEe---
Confidence 112222332 5689999999999886 3 344443 3332
Q ss_pred ecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCC
Q 014990 314 LKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGP 393 (415)
Q Consensus 314 ~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~ 393 (415)
+|+ +++||.||+|+|++|+. ++....|+.++++|++.+|+. ++|+.|||||+|||+..+
T Consensus 241 -------------~g~--~i~aD~Vv~a~G~~p~~----~l~~~~gl~~~~~g~i~vd~~--~~t~~~~Iya~GD~~~~~ 299 (472)
T 3iwa_A 241 -------------DKR--TLDADLVILAAGVSPNT----QLARDAGLELDPRGAIIVDTR--MRTSDPDIFAGGDCVTIP 299 (472)
T ss_dssp -------------SSC--EEECSEEEECSCEEECC----HHHHHHTCCBCTTCCEECCTT--CBCSSTTEEECGGGEEEE
T ss_pred -------------CCC--EEEcCEEEECCCCCcCH----HHHHhCCccCCCCCCEEECCC--cccCCCCEEEeccceecc
Confidence 232 79999999999999975 344456778888899999987 889999999999998321
Q ss_pred ---------ccchhhhhhhHHHHHhhccc
Q 014990 394 ---------TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 394 ---------~~~~~~a~~~g~~~a~~i~~ 413 (415)
......|+.||+.+|.+|..
T Consensus 300 ~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 300 NLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp BTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred cccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 12344699999999999864
No 43
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=4e-30 Score=258.89 Aligned_cols=288 Identities=16% Similarity=0.228 Sum_probs=194.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC----CCCCcchHHHHHHHHHHhhccCeEEEeceEe
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV----APDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
++|+|||||+||+++|..|++.+++.+|+|||+++..+.. ..+. ........++.....+.+++.+++++.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 79 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-SAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEI 79 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-GGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-cccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEE
Confidence 5899999999999999999998444999999999876522 1110 0011112222222233445568888777665
Q ss_pred c------eEEEecc---c---ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHH--hcCCCCCCCCCCCCCCCCe
Q 014990 96 G------SSVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWW--YNGHPDGKNLSPDLKSTDT 161 (415)
Q Consensus 96 ~------~~v~~~~---~---~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~k~ 161 (415)
. ..+.+.. + ...||+||+|||+ .|+.|++||.+.+++++...+... +..... ...+++
T Consensus 80 ~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~-------~~~~~~ 151 (447)
T 1nhp_A 80 TAIQPKEHQVTVKDLVSGEERVENYDKLIISPGA-VPFELDIPGKDLDNIYLMRGRQWAIKLKQKTV-------DPEVNN 151 (447)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCSTTTTSBSEECCCHHHHHHHHHHHHT-------CTTCCE
T ss_pred EEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCC-CcCCCCCCCCCCCCeEEECCHHHHHHHHHHhh-------hcCCCe
Confidence 2 2344432 2 2579999999999 688889999887777765443221 110000 015799
Q ss_pred EEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccc
Q 014990 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDD 241 (415)
Q Consensus 162 V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (415)
|+|||+|++|+|+|..|.+ .+ .+|+++.+++.+...+.++++
T Consensus 152 vvIiG~G~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~~~~~----------------- 193 (447)
T 1nhp_A 152 VVVIGSGYIGIEAAEAFAK--------------------AG-KKVTVIDILDRPLGVYLDKEF----------------- 193 (447)
T ss_dssp EEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSSSTTTTTCCHHH-----------------
T ss_pred EEEECCCHHHHHHHHHHHH--------------------CC-CeEEEEecCcccccccCCHHH-----------------
Confidence 9999999999999999986 34 589999998654321111111
Q ss_pred cCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCc
Q 014990 242 LIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGK 321 (415)
Q Consensus 242 ~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~ 321 (415)
...+.+.+. +.||+++++..+.++. . ++.+..+..
T Consensus 194 ----------------~~~l~~~l~-------------~~gv~i~~~~~v~~i~--~--~~~v~~v~~------------ 228 (447)
T 1nhp_A 194 ----------------TDVLTEEME-------------ANNITIATGETVERYE--G--DGRVQKVVT------------ 228 (447)
T ss_dssp ----------------HHHHHHHHH-------------TTTEEEEESCCEEEEE--C--SSBCCEEEE------------
T ss_pred ----------------HHHHHHHHH-------------hCCCEEEcCCEEEEEE--c--cCcEEEEEE------------
Confidence 111222222 6689999999998886 4 344433322
Q ss_pred ceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCC--------
Q 014990 322 QYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGP-------- 393 (415)
Q Consensus 322 ~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~-------- 393 (415)
++ .++++|.||+|+|++|+. ++.... +.++++|++.+|++ ++|+.|+|||+|||+..+
T Consensus 229 -----~~--~~i~~d~vi~a~G~~p~~----~~~~~~-~~~~~~G~i~Vd~~--~~t~~~~Iya~GD~~~~~~~~~g~~~ 294 (447)
T 1nhp_A 229 -----DK--NAYDADLVVVAVGVRPNT----AWLKGT-LELHPNGLIKTDEY--MRTSEPDVFAVGDATLIKYNPADTEV 294 (447)
T ss_dssp -----SS--CEEECSEEEECSCEEESC----GGGTTT-SCBCTTSCBCCCTT--CBCSSTTEEECGGGSCEEEGGGTEEE
T ss_pred -----CC--CEEECCEEEECcCCCCCh----HHHHhh-hhhcCCCcEEECcc--ccCCCCCEEEeeeEEEeeccCCCCce
Confidence 12 269999999999999975 343444 66677899999987 889999999999998522
Q ss_pred -ccchhhhhhhHHHHHhhccc
Q 014990 394 -TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 394 -~~~~~~a~~~g~~~a~~i~~ 413 (415)
......|+.||+.+|.+|..
T Consensus 295 ~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 295 NIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp CCCCHHHHHHHHHHHHHTSSS
T ss_pred echhHHHHHHHHHHHHHhhcC
Confidence 13455799999999999864
No 44
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.97 E-value=2.1e-30 Score=262.34 Aligned_cols=286 Identities=16% Similarity=0.159 Sum_probs=196.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCC---------------------CcchHHHH-
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPD---------------------HPETKIVI- 75 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~---------------------~~~~~~~~- 75 (415)
.++|+||||||||+++|..|++.| .+|+|||+.+.+||.+.+ +..|. ......+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G--~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAK--YNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCC--CeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 479999999999999999999999 999999999888886432 11110 01111111
Q ss_pred -----------HHHHHHhhccCeEEEeceEec-----eEEEeccc-c--cccCEEEEccCCCCCCCCCCCCCCCCCeeec
Q 014990 76 -----------NQFSRVVQHERCSFFGNVTLG-----SSVSLSEL-R--QLYHVVVLAYGAESDRALGIPGEDLIGVHSA 136 (415)
Q Consensus 76 -----------~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~-~--~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~ 136 (415)
..+...++..+++++.+.... ..+...++ . ..||+||+|||+ .|+.|++||.+ ++++.
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~--~~~t~ 158 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGA-ETAKLRLPGVE--YCLTS 158 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCE-EECCCCCTTGG--GSBCH
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCC-CccCCCCCCcc--ceEeH
Confidence 334455667788888775431 12333332 3 579999999999 78888999986 46665
Q ss_pred hhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCccc
Q 014990 137 REFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (415)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~ 216 (415)
.++....... ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|.+.+.
T Consensus 159 ~~~~~~~~~l---------~~~~~~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~l 208 (466)
T 3l8k_A 159 DDIFGYKTSF---------RKLPQDMVIIGAGYIGLEIASIFRL--------------------MG-VQTHIIEMLDRAL 208 (466)
T ss_dssp HHHHSTTCSC---------CSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSSC
T ss_pred HHHHHHHHHH---------hhCCCeEEEECCCHHHHHHHHHHHH--------------------cC-CEEEEEEeCCcCC
Confidence 5544211111 1147899999999999999999986 34 5899999987653
Q ss_pred CCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccc
Q 014990 217 AACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLE 296 (415)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~ 296 (415)
..+.++++. +.+.+.. . |+++++..+.++.
T Consensus 209 ~~~~d~~~~-------------------------------------~~l~~~l----------~--v~i~~~~~v~~i~- 238 (466)
T 3l8k_A 209 ITLEDQDIV-------------------------------------NTLLSIL----------K--LNIKFNSPVTEVK- 238 (466)
T ss_dssp TTSCCHHHH-------------------------------------HHHHHHH----------C--CCEECSCCEEEEE-
T ss_pred CCCCCHHHH-------------------------------------HHHHhcC----------E--EEEEECCEEEEEE-
Confidence 322122211 1111111 2 8888888888886
Q ss_pred cCCCC-CCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCC
Q 014990 297 SNERS-GHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGD 375 (415)
Q Consensus 297 ~~~~~-~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~ 375 (415)
. .+ +.+ .+.+.+ .+|+.+++++|.||+|+|++|+.. + .....|+.++++| +.+|++
T Consensus 239 -~-~~~~~v-~v~~~~--------------~~G~~~~i~~D~vi~a~G~~p~~~--l-~l~~~gl~~~~~G-i~vd~~-- 295 (466)
T 3l8k_A 239 -K-IKDDEY-EVIYST--------------KDGSKKSIFTNSVVLAAGRRPVIP--E-GAREIGLSISKTG-IVVDET-- 295 (466)
T ss_dssp -E-EETTEE-EEEECC--------------TTSCCEEEEESCEEECCCEEECCC--T-TTGGGTCCBCSSS-BCCCTT--
T ss_pred -E-cCCCcE-EEEEEe--------------cCCceEEEEcCEEEECcCCCcccc--c-chhhcCceeCCCC-EeECCC--
Confidence 3 22 332 233321 034445899999999999999762 2 1355678888899 999986
Q ss_pred CCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 376 SSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 376 ~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 296 ~~t~~~~Iya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 296 MKTNIPNVFATGDANGLAP-YYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp CBCSSTTEEECGGGTCSCC-SHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCEEEEEecCCCCc-cHhHHHHHHHHHHHHHhC
Confidence 8999999999999986544 445799999999999874
No 45
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=1.5e-30 Score=256.84 Aligned_cols=291 Identities=16% Similarity=0.207 Sum_probs=195.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC-CCc-cccCCCCCCcchHHHHH-HHHHHhhccCeEEEeceE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP-FGL-VRSGVAPDHPETKIVIN-QFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~-gg~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 94 (415)
..++|+|||||+||+++|..|++.++..+|+|+|+++.. ... ......+......++.. .+...++..+++++.+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 82 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTR 82 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCE
Confidence 357899999999999999999999866789999987521 110 11111122222333322 234455667888887654
Q ss_pred ec------eEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCC
Q 014990 95 LG------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQG 168 (415)
Q Consensus 95 v~------~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G 168 (415)
+. +.+.+.+....||+||+|||+ .|+.|++||.+.+++++...+....... ..+..+++|+|||+|
T Consensus 83 v~~i~~~~~~v~~~~~~~~~d~lviAtG~-~p~~p~i~g~~~~~v~~~~~~~~~~~~~-------~~~~~~~~v~ViGgG 154 (384)
T 2v3a_A 83 VTGIDPGHQRIWIGEEEVRYRDLVLAWGA-EPIRVPVEGDAQDALYPINDLEDYARFR-------QAAAGKRRVLLLGAG 154 (384)
T ss_dssp CCEEEGGGTEEEETTEEEECSEEEECCCE-EECCCCCBSTTTTCEEECSSHHHHHHHH-------HHHTTCCEEEEECCS
T ss_pred EEEEECCCCEEEECCcEEECCEEEEeCCC-CcCCCCCCCcCcCCEEEECCHHHHHHHH-------HhhccCCeEEEECCC
Confidence 32 345554445689999999999 7888899998766777765554321100 001247999999999
Q ss_pred hhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCc
Q 014990 169 NVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTD 248 (415)
Q Consensus 169 ~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~ 248 (415)
.+|+|+|..|.+ .+ .+|+++.+.+.+...+.++++
T Consensus 155 ~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~~~~~~~~~~------------------------ 189 (384)
T 2v3a_A 155 LIGCEFANDLSS--------------------GG-YQLDVVAPCEQVMPGLLHPAA------------------------ 189 (384)
T ss_dssp HHHHHHHHHHHH--------------------TT-CEEEEEESSSSSSTTTSCHHH------------------------
T ss_pred HHHHHHHHHHHh--------------------CC-CeEEEEecCcchhhcccCHHH------------------------
Confidence 999999999986 34 589999988654322212111
Q ss_pred HHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCC
Q 014990 249 EEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTG 328 (415)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g 328 (415)
...+.+.+. +.|++++++..+.++. . ++....+++. +|
T Consensus 190 ---------~~~l~~~l~-------------~~gv~i~~~~~v~~i~--~--~~~~~~v~~~----------------~g 227 (384)
T 2v3a_A 190 ---------AKAVQAGLE-------------GLGVRFHLGPVLASLK--K--AGEGLEAHLS----------------DG 227 (384)
T ss_dssp ---------HHHHHHHHH-------------TTTCEEEESCCEEEEE--E--ETTEEEEEET----------------TS
T ss_pred ---------HHHHHHHHH-------------HcCCEEEeCCEEEEEE--e--cCCEEEEEEC----------------CC
Confidence 111222222 5689999999888886 3 2222223221 23
Q ss_pred ceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeecccc--CC-ccchhhhhhhHH
Q 014990 329 EFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKR--GP-TGIIATNLYCAE 405 (415)
Q Consensus 329 ~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~--~~-~~~~~~a~~~g~ 405 (415)
+++++|.||+|+|++|+. ++....|+..+ +| +.+|++ ++|+.|||||+|||+. +. ......|+.||+
T Consensus 228 --~~i~~d~vv~a~G~~p~~----~l~~~~g~~~~-~g-i~vd~~--~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~ 297 (384)
T 2v3a_A 228 --EVIPCDLVVSAVGLRPRT----ELAFAAGLAVN-RG-IVVDRS--LRTSHANIYALGDCAEVDGLNLLYVMPLMACAR 297 (384)
T ss_dssp --CEEEESEEEECSCEEECC----HHHHHTTCCBS-SS-EEECTT--CBCSSTTEEECGGGEEETTBCCCSHHHHHHHHH
T ss_pred --CEEECCEEEECcCCCcCH----HHHHHCCCCCC-CC-EEECCC--CCCCCCCEEEeeeeeeECCCCcchHHHHHHHHH
Confidence 379999999999999975 24455677776 57 999987 7899999999999984 22 223446899999
Q ss_pred HHHhhccc
Q 014990 406 ETVSSLSL 413 (415)
Q Consensus 406 ~~a~~i~~ 413 (415)
.+|.+|..
T Consensus 298 ~~a~~i~g 305 (384)
T 2v3a_A 298 ALAQTLAG 305 (384)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99999864
No 46
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.97 E-value=9.3e-31 Score=265.75 Aligned_cols=289 Identities=16% Similarity=0.169 Sum_probs=193.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCCCC--Ccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVAPD--HPE 70 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~~~--~~~ 70 (415)
..++|+||||||||+++|..|++.| .+|+|||+. .+||.+. +++... ...
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G--~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELG--ARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFN 95 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 4689999999999999999999999 999999977 4554321 111110 001
Q ss_pred hH-----------HHHHHHHHHhhccCeEEEeceEec-----eEEEecccccccCEEEEccCCCCCCCC---CCCCCCCC
Q 014990 71 TK-----------IVINQFSRVVQHERCSFFGNVTLG-----SSVSLSELRQLYHVVVLAYGAESDRAL---GIPGEDLI 131 (415)
Q Consensus 71 ~~-----------~~~~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~~~~~d~lvlAtG~~~~~~~---~i~g~~~~ 131 (415)
.. .+...+...++..+++++.+.... ..+..+.....||+||||||+ .|+.| ++||.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g~~~~~d~lviAtG~-~p~~p~~~~i~G~~-- 172 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGG-MPSTPHESQIPGAS-- 172 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETTEEEECSCEEECCCE-EECCCCTTTSTTGG--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECCEEEEeeEEEEccCC-CCCCCCcCCCCCCc--
Confidence 11 111223445566788888776431 234433334689999999998 67777 888875
Q ss_pred CeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEee
Q 014990 132 GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGR 211 (415)
Q Consensus 132 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r 211 (415)
...++..+.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|
T Consensus 173 ~~~~~~~~~~----~---------~~~~~~vvViGgG~~g~E~A~~l~~--------------------~g-~~Vtlv~~ 218 (478)
T 3dk9_A 173 LGITSDGFFQ----L---------EELPGRSVIVGAGYIAVEMAGILSA--------------------LG-SKTSLMIR 218 (478)
T ss_dssp GSBCHHHHTT----C---------CSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECS
T ss_pred eeEchHHhhc----h---------hhcCccEEEECCCHHHHHHHHHHHH--------------------cC-CeEEEEEe
Confidence 2333333221 1 1147999999999999999999986 34 58999999
Q ss_pred cCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccc
Q 014990 212 RGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKP 291 (415)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~ 291 (415)
++.+...+.. . +...+.+.+. +.||+++++..+
T Consensus 219 ~~~~l~~~d~-----------------------------~-----~~~~~~~~l~-------------~~gv~i~~~~~v 251 (478)
T 3dk9_A 219 HDKVLRSFDS-----------------------------M-----ISTNCTEELE-------------NAGVEVLKFSQV 251 (478)
T ss_dssp SSSSCTTSCH-----------------------------H-----HHHHHHHHHH-------------HTTCEEETTEEE
T ss_pred CCccccccCH-----------------------------H-----HHHHHHHHHH-------------HCCCEEEeCCEE
Confidence 8754321111 1 1112223332 568999999988
Q ss_pred ccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCc--eEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCcee
Q 014990 292 DSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGE--FEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVL 369 (415)
Q Consensus 292 ~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~--~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~ 369 (415)
.++. ...++....+.+.+. ..++ +.++++|.||+|+|++|+.. .+. ....|+.++++|++.
T Consensus 252 ~~i~--~~~~~~~~~v~~~~~-------------~~g~~~g~~~~~D~vi~a~G~~p~~~-~l~-l~~~g~~~~~~G~i~ 314 (478)
T 3dk9_A 252 KEVK--KTLSGLEVSMVTAVP-------------GRLPVMTMIPDVDCLLWAIGRVPNTK-DLS-LNKLGIQTDDKGHII 314 (478)
T ss_dssp EEEE--ECSSSEEEEEEECCT-------------TSCCEEEEEEEESEEEECSCEEESCT-TSC-GGGGTCCBCTTCCBC
T ss_pred EEEE--EcCCCcEEEEEEccC-------------CCCcccceEEEcCEEEEeeccccCCC-CCC-chhcCCeeCCCCCEe
Confidence 8886 311221122333220 0122 36899999999999999762 121 345678888899999
Q ss_pred eccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 370 KNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 370 v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|++ ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 315 vd~~--~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 315 VDEF--QNTNVKGIYAVGDVCGKAL-LTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp CCTT--CBCSSTTEEECGGGGCSSC-CHHHHHHHHHHHHHHHHS
T ss_pred eCCC--cccCCCCEEEEEecCCCCc-cHhHHHHHHHHHHHHHcC
Confidence 9987 8999999999999985554 455799999999999864
No 47
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.97 E-value=5.1e-30 Score=260.34 Aligned_cols=289 Identities=18% Similarity=0.221 Sum_probs=194.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc--------------------------CCCC-C--Cc
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS--------------------------GVAP-D--HP 69 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~--------------------------~~~~-~--~~ 69 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.. ++.. . ..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLG--FNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 578999999999999999999998 999999998777764211 1100 0 00
Q ss_pred chHHHH-----------HHHHHHhhccCeEEEeceEec-----eEEEeccc---c------cccCEEEEccCCCCCCCCC
Q 014990 70 ETKIVI-----------NQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---R------QLYHVVVLAYGAESDRALG 124 (415)
Q Consensus 70 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~------~~~d~lvlAtG~~~~~~~~ 124 (415)
....+. ..+...++..+++++.++.+. ..+...++ . ..||+||+|||+ .|+ +
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs-~p~--~ 159 (478)
T 1v59_A 83 NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGS-EVT--P 159 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCE-EEC--C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCC-CCC--C
Confidence 111111 123345566789988877542 12333332 4 679999999999 342 3
Q ss_pred CCCCCCC--CeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCC
Q 014990 125 IPGEDLI--GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS 202 (415)
Q Consensus 125 i~g~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~ 202 (415)
+||.+.. .+.++.++.. .. ..+++|+|||+|.+|+|+|..|.+ .+
T Consensus 160 ~~g~~~~~~~v~~~~~~~~----~~---------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g 206 (478)
T 1v59_A 160 FPGIEIDEEKIVSSTGALS----LK---------EIPKRLTIIGGGIIGLEMGSVYSR--------------------LG 206 (478)
T ss_dssp CTTCCCCSSSEECHHHHTT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TT
T ss_pred CCCCCCCCceEEcHHHHHh----hh---------ccCceEEEECCCHHHHHHHHHHHH--------------------cC
Confidence 4555433 3555443321 10 137999999999999999999986 34
Q ss_pred cceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCcee
Q 014990 203 IRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRE 282 (415)
Q Consensus 203 ~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 282 (415)
.+|+++.|++.+...+. ++ +...+.+.+. +.|
T Consensus 207 -~~Vtlv~~~~~~l~~~~-~~---------------------------------~~~~l~~~l~-------------~~g 238 (478)
T 1v59_A 207 -SKVTVVEFQPQIGASMD-GE---------------------------------VAKATQKFLK-------------KQG 238 (478)
T ss_dssp -CEEEEECSSSSSSSSSC-HH---------------------------------HHHHHHHHHH-------------HTT
T ss_pred -CEEEEEEeCCccccccC-HH---------------------------------HHHHHHHHHH-------------HCC
Confidence 58999999875432111 11 1112222232 568
Q ss_pred EEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccc
Q 014990 283 LHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVP 362 (415)
Q Consensus 283 v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~ 362 (415)
|+++++..+.++. .++++....+++.+. .+++++++++|.||+|+|++|+. ..+ +....|+.+
T Consensus 239 v~i~~~~~v~~i~--~~~~~~~~~v~~~~~-------------~~g~~~~~~~D~vv~a~G~~p~~-~~l-~l~~~g~~~ 301 (478)
T 1v59_A 239 LDFKLSTKVISAK--RNDDKNVVEIVVEDT-------------KTNKQENLEAEVLLVAVGRRPYI-AGL-GAEKIGLEV 301 (478)
T ss_dssp CEEECSEEEEEEE--EETTTTEEEEEEEET-------------TTTEEEEEEESEEEECSCEEECC-TTS-CTTTTTCCB
T ss_pred CEEEeCCEEEEEE--EecCCCeEEEEEEEc-------------CCCCceEEECCEEEECCCCCcCC-CCC-CchhcCcee
Confidence 9999999888886 200333334444321 13455689999999999999975 211 446678888
Q ss_pred cCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 363 NIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 363 ~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+++|++.+|+. ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 302 ~~~G~i~vd~~--~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 302 DKRGRLVIDDQ--FNSKFPHIKVVGDVTFGPM-LAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CTTSCBCCCTT--SBCSSTTEEECGGGSSSCC-CHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEeECcC--CccCCCCEEEeeccCCCcc-cHHHHHHHHHHHHHHHcC
Confidence 88899999987 7899999999999987554 455799999999999864
No 48
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.97 E-value=2e-30 Score=268.69 Aligned_cols=307 Identities=14% Similarity=0.158 Sum_probs=195.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC----CCCCCc-chHHHHHHHHHHhhccCeEEEeceE
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDHP-ETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
++|+|||||+||+++|..|++.+++.+|+|||+++.++.. ..+ ...... ....+..+...+.++.+++++.++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA-NCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHE 80 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC-GGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc-ccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 6899999999999999999999666999999999876521 111 101111 1112223344445556888877766
Q ss_pred ec------eEEEecc---c---ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCCCCCCCCC
Q 014990 95 LG------SSVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 95 v~------~~v~~~~---~---~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~k 160 (415)
+. +.+++.. . ...||+||||||+ .|+.|++||.+..++++...+.. .+.... ....++
T Consensus 81 V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~-~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~-------~~~~~~ 152 (565)
T 3ntd_A 81 VVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA-APIVPPIPGVDNPLTHSLRNIPDMDRILQTI-------QMNNVE 152 (565)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCTTCCSTTEECCSSHHHHHHHHHHH-------HHTTCS
T ss_pred EEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC-CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHH-------hhCCCC
Confidence 52 2233322 2 3479999999999 78888999998777766543321 111000 001578
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEccc
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRED 240 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (415)
+|+|||+|.+|+|+|..|.+ .+ .+|+++.|++.+...+. +++
T Consensus 153 ~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~-~~~---------------- 194 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHH--------------------LG-IKTTLLELADQVMTPVD-REM---------------- 194 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSSSSCTTSC-HHH----------------
T ss_pred EEEEECCCHHHHHHHHHHHh--------------------cC-CcEEEEEcCCccchhcC-HHH----------------
Confidence 99999999999999999986 34 58999999875432111 111
Q ss_pred ccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCC
Q 014990 241 DLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPG 320 (415)
Q Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g 320 (415)
...+.+.+. +.||+++++..+.++. ...+..+..............++
T Consensus 195 -----------------~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~~~~~~~~~~~~~~~~~~~~~~~ 242 (565)
T 3ntd_A 195 -----------------AGFAHQAIR-------------DQGVDLRLGTALSEVS--YQVQTHVASDAAGEDTAHQHIKG 242 (565)
T ss_dssp -----------------HHHHHHHHH-------------HTTCEEEETCCEEEEE--EECCCCCCCGGGTCCCTTCCTTC
T ss_pred -----------------HHHHHHHHH-------------HCCCEEEeCCeEEEEe--ccccccccccccccccccccCCC
Confidence 111222222 5689999998888876 20010000000000000000001
Q ss_pred cc-eeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeecccc------CC
Q 014990 321 KQ-YAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKR------GP 393 (415)
Q Consensus 321 ~~-~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~------~~ 393 (415)
.. +...+| ++++||.||+|+|++|+. .+....|+.++++|++.+|++ ++|+.|||||+|||+. +.
T Consensus 243 ~~~v~~~~g--~~i~~D~vi~a~G~~p~~----~l~~~~g~~~~~~g~i~vd~~--~~t~~~~IyA~GD~~~~~~~~~g~ 314 (565)
T 3ntd_A 243 HLSLTLSNG--ELLETDLLIMAIGVRPET----QLARDAGLAIGELGGIKVNAM--MQTSDPAIYAVGDAVEEQDFVTGQ 314 (565)
T ss_dssp EEEEEETTS--CEEEESEEEECSCEEECC----HHHHHHTCCBCTTSSBCCCTT--CBCSSTTEEECGGGBCEEBTTTCC
T ss_pred cEEEEEcCC--CEEEcCEEEECcCCccch----HHHHhCCcccCCCCCEEECCC--cccCCCCEEEeeeeEeeccccCCc
Confidence 00 001123 379999999999999975 344455778888899999986 8899999999999973 22
Q ss_pred c---cchhhhhhhHHHHHhhccc
Q 014990 394 T---GIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 394 ~---~~~~~a~~~g~~~a~~i~~ 413 (415)
. .....|+.||+.||.+|..
T Consensus 315 ~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 315 ACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp EECCCCHHHHHHHHHHHHHHHTT
T ss_pred eeecccHHHHHHHHHHHHHHhcC
Confidence 1 2455799999999999874
No 49
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.97 E-value=1.4e-29 Score=256.32 Aligned_cols=282 Identities=18% Similarity=0.205 Sum_probs=193.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------c-CCCCCC--c
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------S-GVAPDH--P 69 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~-~~~~~~--~ 69 (415)
..++|+|||||+||+++|.+|++.+ .+|+|||++ .+||.+. + ++.+.. .
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQG--AQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 79 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc
Confidence 4689999999999999999999998 999999998 4555321 1 121110 0
Q ss_pred chHHHH-------HH-----HHHHhhcc-CeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCCCCCCCC
Q 014990 70 ETKIVI-------NQ-----FSRVVQHE-RCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGE 128 (415)
Q Consensus 70 ~~~~~~-------~~-----~~~~~~~~-~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~~~i~g~ 128 (415)
....+. .. +...++.. +++++.+.... ..+...++ ...||+||+|||+ .|+.|++||.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs-~p~~p~i~G~ 158 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGA-SPAVPPIPGL 158 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCE-EECCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCC-CCCCCCCCCC
Confidence 111111 11 12445556 88887765321 12333333 3579999999998 7888899998
Q ss_pred CCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEE
Q 014990 129 DLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYL 208 (415)
Q Consensus 129 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 208 (415)
+...+++..++.. + ...+++|+|||+|.+|+|+|..|.+ .+ .+|++
T Consensus 159 ~~~~~~~~~~~~~-~------------~~~~~~vvViGgG~~g~E~A~~l~~--------------------~g-~~Vtl 204 (467)
T 1zk7_A 159 KESPYWTSTEALA-S------------DTIPERLAVIGSSVVALELAQAFAR--------------------LG-SKVTV 204 (467)
T ss_dssp TTSCCBCHHHHHH-C------------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEE
T ss_pred CcCceecHHHHhc-c------------cccCCEEEEECCCHHHHHHHHHHHH--------------------cC-CEEEE
Confidence 7655666554442 1 1147999999999999999999986 34 58999
Q ss_pred EeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEec
Q 014990 209 VGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFF 288 (415)
Q Consensus 209 ~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~ 288 (415)
+.|++.+.. + +++ +...+.+.+. +.||+++++
T Consensus 205 v~~~~~~l~-~-~~~---------------------------------~~~~l~~~l~-------------~~Gv~i~~~ 236 (467)
T 1zk7_A 205 LARNTLFFR-E-DPA---------------------------------IGEAVTAAFR-------------AEGIEVLEH 236 (467)
T ss_dssp ECSSCTTTT-S-CHH---------------------------------HHHHHHHHHH-------------HTTCEEETT
T ss_pred EEECCccCC-C-CHH---------------------------------HHHHHHHHHH-------------hCCCEEEcC
Confidence 999875421 1 111 1112222232 568999999
Q ss_pred cccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCce
Q 014990 289 RKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRV 368 (415)
Q Consensus 289 ~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i 368 (415)
..+.++. . ++....+.+ .+ .++++|.||+|+|++|+. ..+ .....++.++++|++
T Consensus 237 ~~v~~i~--~--~~~~~~v~~-----------------~~--~~i~aD~Vv~a~G~~p~~-~~l-~l~~~gl~~~~~G~i 291 (467)
T 1zk7_A 237 TQASQVA--H--MDGEFVLTT-----------------TH--GELRADKLLVATGRTPNT-RSL-ALDAAGVTVNAQGAI 291 (467)
T ss_dssp CCEEEEE--E--ETTEEEEEE-----------------TT--EEEEESEEEECSCEEESC-TTS-CGGGGTCCBCTTSCB
T ss_pred CEEEEEE--E--eCCEEEEEE-----------------CC--cEEEcCEEEECCCCCcCC-CcC-CchhcCCcCCCCCCE
Confidence 9888886 3 332222221 22 279999999999999975 111 124557777888999
Q ss_pred eeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 369 LKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 369 ~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
.+|+. ++|+.|+|||+|||+..+.. ...|+.||+.+|.+|..
T Consensus 292 ~vd~~--~~t~~~~iya~GD~~~~~~~-~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 292 VIDQG--MRTSNPNIYAAGDCTDQPQF-VYVAAAAGTRAAINMTG 333 (467)
T ss_dssp CCCTT--CBCSSTTEEECSTTBSSCCC-HHHHHHHHHHHHHHHTT
T ss_pred EECCC--cccCCCCEEEEeccCCCccc-HHHHHHHHHHHHHHHcC
Confidence 99987 88999999999999876543 44799999999999863
No 50
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-30 Score=263.57 Aligned_cols=284 Identities=14% Similarity=0.131 Sum_probs=192.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCC------C
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVA------P 66 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~------~ 66 (415)
..++|+|||||+||+++|..|++.+ .+|+|||++. .||.+. ++.. +
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g--~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYG--AKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTS--CCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCC--CcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 4689999999999999999999998 9999999984 555321 1110 0
Q ss_pred --CCcchHHHH-----------HHHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCCC-C
Q 014990 67 --DHPETKIVI-----------NQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRAL-G 124 (415)
Q Consensus 67 --~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~~-~ 124 (415)
.......+. ..+...++..+++++.+.... ..+...++ ...||+||+|||+ .|+.| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs-~p~~p~~ 165 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGG-KAIFPEN 165 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCE-EECCCTT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCC-CCCCCCC
Confidence 000111111 123344556788888775431 12333333 3579999999999 67787 8
Q ss_pred CCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcc
Q 014990 125 IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR 204 (415)
Q Consensus 125 i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (415)
+||.+ .+.++.++.. + ...+++|+|||+|.+|+|+|..|.+ .+ .
T Consensus 166 i~g~~--~~~~~~~~~~-l------------~~~~~~vvViGgG~ig~E~A~~l~~--------------------~g-~ 209 (479)
T 2hqm_A 166 IPGFE--LGTDSDGFFR-L------------EEQPKKVVVVGAGYIGIELAGVFHG--------------------LG-S 209 (479)
T ss_dssp STTGG--GSBCHHHHHH-C------------SSCCSEEEEECSSHHHHHHHHHHHH--------------------TT-C
T ss_pred CCCcc--cccchHHHhc-c------------cccCCeEEEECCCHHHHHHHHHHHH--------------------cC-C
Confidence 88874 2444444432 1 0147999999999999999999986 34 5
Q ss_pred eEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEE
Q 014990 205 KVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELH 284 (415)
Q Consensus 205 ~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~ 284 (415)
+|+++.|++.+...+. ++ +...+.+.+. +.||+
T Consensus 210 ~Vtlv~~~~~~l~~~d-~~---------------------------------~~~~l~~~l~-------------~~Gv~ 242 (479)
T 2hqm_A 210 ETHLVIRGETVLRKFD-EC---------------------------------IQNTITDHYV-------------KEGIN 242 (479)
T ss_dssp EEEEECSSSSSCTTSC-HH---------------------------------HHHHHHHHHH-------------HHTCE
T ss_pred ceEEEEeCCccccccC-HH---------------------------------HHHHHHHHHH-------------hCCeE
Confidence 8999999875432111 11 1122223332 56899
Q ss_pred EEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccC
Q 014990 285 FVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNI 364 (415)
Q Consensus 285 ~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~ 364 (415)
++++..+.++. .++++.+..+++. +|+ +++++|.||+|+|++|+. .+. .+..|+.+++
T Consensus 243 i~~~~~v~~i~--~~~~~~~~~v~~~----------------~G~-~~i~~D~vv~a~G~~p~~--~l~-l~~~gl~~~~ 300 (479)
T 2hqm_A 243 VHKLSKIVKVE--KNVETDKLKIHMN----------------DSK-SIDDVDELIWTIGRKSHL--GMG-SENVGIKLNS 300 (479)
T ss_dssp EECSCCEEEEE--ECC-CCCEEEEET----------------TSC-EEEEESEEEECSCEEECC--CSS-GGGGTCCBCT
T ss_pred EEeCCEEEEEE--EcCCCcEEEEEEC----------------CCc-EEEEcCEEEECCCCCCcc--ccC-hhhcCceECC
Confidence 99999998886 3112222233321 232 479999999999999976 221 3556788888
Q ss_pred CCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 365 RGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 365 ~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|++.+|+. ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 301 ~G~i~vd~~--~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 301 HDQIIADEY--QNTNVPNIYSLGDVVGKVE-LTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp TSCBCCCTT--CBCSSTTEEECGGGTTSSC-CHHHHHHHHHHHHHHHHS
T ss_pred CCCEeECCC--CccCCCCEEEEEecCCCcc-cHHHHHHHHHHHHHHhcC
Confidence 899999987 7899999999999975544 455799999999999863
No 51
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.97 E-value=1.5e-30 Score=265.32 Aligned_cols=285 Identities=19% Similarity=0.234 Sum_probs=193.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCCceEEEEc--------CCCCCCCcccc-CCCC---------------------
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIID--------RLPTPFGLVRS-GVAP--------------------- 66 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~-~g~~~~v~lie--------~~~~~gg~~~~-~~~~--------------------- 66 (415)
..++|+|||||+||+++|..|++ .| .+|+||| +...+||.+.. ++.|
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G--~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 83 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYG--KRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFG 83 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHC--CCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccCEEEECCChhHHHHHHHHHHhcC--CeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcC
Confidence 35799999999999999999999 98 9999999 34556664321 1111
Q ss_pred ---C----CcchHHHHH-----------HHHHHhhcc-CeEEEeceEec---eEEEec---------ccccccCEEEEcc
Q 014990 67 ---D----HPETKIVIN-----------QFSRVVQHE-RCSFFGNVTLG---SSVSLS---------ELRQLYHVVVLAY 115 (415)
Q Consensus 67 ---~----~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~v~---~~v~~~---------~~~~~~d~lvlAt 115 (415)
. .....++.. .+...++.. +++++.+.... +.+.+. .....||+|||||
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViAT 163 (495)
T 2wpf_A 84 WEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLAT 163 (495)
T ss_dssp EECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred cccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeC
Confidence 0 001111111 223344566 89988876431 234443 2235899999999
Q ss_pred CCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHH
Q 014990 116 GAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAW 195 (415)
Q Consensus 116 G~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~ 195 (415)
|+ .|+.|++||.+ .++++.++.. . ...+++|+|||+|.+|+|+|..|.+
T Consensus 164 Gs-~p~~p~i~G~~--~~~~~~~~~~----~---------~~~~~~vvViGgG~ig~E~A~~l~~--------------- 212 (495)
T 2wpf_A 164 GS-WPQMPAIPGIE--HCISSNEAFY----L---------PEPPRRVLTVGGGFISVEFAGIFNA--------------- 212 (495)
T ss_dssp CE-EECCCCCTTGG--GCEEHHHHTT----C---------SSCCSEEEEECSSHHHHHHHHHHHH---------------
T ss_pred CC-CcCCCCCCCcc--ccccHHHHHh----h---------hhcCCeEEEECCCHHHHHHHHHHHh---------------
Confidence 99 67888899873 3455444331 1 1147899999999999999999986
Q ss_pred HHhhcC-C-cceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccC
Q 014990 196 TALEGS-S-IRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASAS 273 (415)
Q Consensus 196 ~~~~~~-~-~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~ 273 (415)
. . ..+|+++.|++.+...+.. + +...+.+.+.
T Consensus 213 -----~~~~g~~Vtlv~~~~~~l~~~d~-~---------------------------------~~~~l~~~l~------- 246 (495)
T 2wpf_A 213 -----YKPPGGKVTLCYRNNLILRGFDE-T---------------------------------IREEVTKQLT------- 246 (495)
T ss_dssp -----HCCTTCEEEEEESSSSSCTTSCH-H---------------------------------HHHHHHHHHH-------
T ss_pred -----hCCCCCeEEEEEcCCccccccCH-H---------------------------------HHHHHHHHHH-------
Confidence 2 0 3589999998754321111 1 1122223332
Q ss_pred CCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCc
Q 014990 274 SQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLP 353 (415)
Q Consensus 274 ~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~ 353 (415)
+.||+++++..+.++. . +++....+++. +|+ ++++|.||+|+|++|+. ..+
T Consensus 247 ------~~GV~i~~~~~v~~i~--~-~~~~~~~v~~~----------------~G~--~i~~D~vv~a~G~~p~~-~~L- 297 (495)
T 2wpf_A 247 ------ANGIEIMTNENPAKVS--L-NTDGSKHVTFE----------------SGK--TLDVDVVMMAIGRIPRT-NDL- 297 (495)
T ss_dssp ------HTTCEEEESCCEEEEE--E-CTTSCEEEEET----------------TSC--EEEESEEEECSCEEECC-GGG-
T ss_pred ------hCCCEEEeCCEEEEEE--E-cCCceEEEEEC----------------CCc--EEEcCEEEECCCCcccc-ccc-
Confidence 5689999999999886 3 22222233321 232 79999999999999975 111
Q ss_pred ccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 354 FDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 354 ~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
..+..|+.++++|++.+|+. ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 298 ~l~~~gl~~~~~G~i~Vd~~--~~t~~~~IyA~GD~~~~~~-l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 298 QLGNVGVKLTPKGGVQVDEF--SRTNVPNIYAIGDITDRLM-LTPVAINEGAALVDTVFG 354 (495)
T ss_dssp TGGGTTCCBCTTSSBCCCTT--CBCSSTTEEECGGGGCSCC-CHHHHHHHHHHHHHHHHS
T ss_pred chhhcCccCCCCCCEEECCC--CccCCCCEEEEeccCCCcc-CHHHHHHHHHHHHHHhcC
Confidence 13556788888899999987 8899999999999986543 555799999999999864
No 52
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=3.7e-30 Score=261.48 Aligned_cols=290 Identities=15% Similarity=0.151 Sum_probs=193.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc---cCCCCCCcchHHHHHHH-HHHhhccCeEEEeceE
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR---SGVAPDHPETKIVINQF-SRVVQHERCSFFGNVT 94 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 94 (415)
.++|+|||||+||+++|..|++.+++.+|+|||+.+..+.... ...........++.... ..+.+..+++++.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 5799999999999999999999743499999999887542210 00001111122222111 2222455888887655
Q ss_pred ec------eEEEecc---c---ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHH--HhcCCCCCCCCCCCCCCCC
Q 014990 95 LG------SSVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVW--WYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 95 v~------~~v~~~~---~---~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~k 160 (415)
+. ..+.+.. + ...||+||+|||+ .|+.|++||.+.+++++...+.. .+..... ...++
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~-------~~~~~ 187 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV-RPVMPEWEGRDLQGVHLLKTIPDAERILKTLE-------TNKVE 187 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCBTTTSBTEECCSSHHHHHHHHHHHH-------SSCCC
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC-cccCCCCCCccCCCEEEeCCHHHHHHHHHHhh-------hcCCC
Confidence 42 2333332 2 3589999999999 68888999987667766432221 1110000 01579
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEccc
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRED 240 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (415)
+|+|||+|++|+|+|..|.+ .+ .+|+++.|++.+...+. +
T Consensus 188 ~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~-~------------------ 227 (480)
T 3cgb_A 188 DVTIIGGGAIGLEMAETFVE--------------------LG-KKVRMIERNDHIGTIYD-G------------------ 227 (480)
T ss_dssp EEEEECCHHHHHHHHHHHHH--------------------TT-CEEEEECCGGGTTSSSC-H------------------
T ss_pred eEEEECCCHHHHHHHHHHHh--------------------cC-CeEEEEEeCCchhhcCC-H------------------
Confidence 99999999999999999986 34 58999998865422111 1
Q ss_pred ccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCC
Q 014990 241 DLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPG 320 (415)
Q Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g 320 (415)
.+...+.+.+. +.||+++++..+.++. . ++.+..+..
T Consensus 228 ---------------~~~~~l~~~l~-------------~~Gv~i~~~~~v~~i~--~--~~~v~~v~~----------- 264 (480)
T 3cgb_A 228 ---------------DMAEYIYKEAD-------------KHHIEILTNENVKAFK--G--NERVEAVET----------- 264 (480)
T ss_dssp ---------------HHHHHHHHHHH-------------HTTCEEECSCCEEEEE--E--SSBEEEEEE-----------
T ss_pred ---------------HHHHHHHHHHH-------------HcCcEEEcCCEEEEEE--c--CCcEEEEEE-----------
Confidence 11112222222 5689999999988886 3 443433321
Q ss_pred cceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCc------
Q 014990 321 KQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPT------ 394 (415)
Q Consensus 321 ~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~------ 394 (415)
.+ .+++||.||+|+|++|+. ++....|+.++++|++.+|++ ++|+.|||||+|||+..+.
T Consensus 265 ------~~--~~i~~D~vi~a~G~~p~~----~~l~~~g~~~~~~G~I~Vd~~--~~ts~p~IyA~GD~~~~~~~~~g~~ 330 (480)
T 3cgb_A 265 ------DK--GTYKADLVLVSVGVKPNT----DFLEGTNIRTNHKGAIEVNAY--MQTNVQDVYAAGDCATHYHVIKEIH 330 (480)
T ss_dssp ------TT--EEEECSEEEECSCEEESC----GGGTTSCCCBCTTSCBCCCTT--SBCSSTTEEECGGGBCEEBTTTCSE
T ss_pred ------CC--CEEEcCEEEECcCCCcCh----HHHHhCCcccCCCCCEEECCC--ccCCCCCEEEeeeEEEecCCCCCcc
Confidence 12 279999999999999975 355667788888899999987 8899999999999984321
Q ss_pred ---cchhhhhhhHHHHHhhccc
Q 014990 395 ---GIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 395 ---~~~~~a~~~g~~~a~~i~~ 413 (415)
.....|+.||+.+|.+|..
T Consensus 331 ~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 331 DHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp ECCCCHHHHHHHHHHHHHHHTT
T ss_pred eecchHHHHHHHHHHHHHHhcC
Confidence 2455799999999999864
No 53
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.97 E-value=9.6e-30 Score=259.66 Aligned_cols=281 Identities=16% Similarity=0.099 Sum_probs=196.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCCceEEEEcCCCCCCCccc-------------------------cCCC--CC-
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKA---HQEAQVDIIDRLPTPFGLVR-------------------------SGVA--PD- 67 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~---g~~~~v~lie~~~~~gg~~~-------------------------~~~~--~~- 67 (415)
.++|+|||||+||+++|.+|++. + .+|+|||+.+ +||... +++. ..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G--~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~ 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPET--TQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTT--EEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCc--CEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 36899999999999999999999 7 9999999988 665321 1110 00
Q ss_pred -CcchHHH-----------HHHHHHHhhccCeEEEeceEec---------eE--EEeccc---ccccCEEEEccCCCCCC
Q 014990 68 -HPETKIV-----------INQFSRVVQHERCSFFGNVTLG---------SS--VSLSEL---RQLYHVVVLAYGAESDR 121 (415)
Q Consensus 68 -~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~---------~~--v~~~~~---~~~~d~lvlAtG~~~~~ 121 (415)
......+ ...+.+.++..+++++.+.... .. +...++ ...||+||+|||+ .|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs-~p~ 157 (499)
T 1xdi_A 79 AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGA-SPR 157 (499)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCE-EEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCC-CCC
Confidence 0111111 2224555667789988776431 22 222223 3579999999999 688
Q ss_pred CCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcC
Q 014990 122 ALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS 201 (415)
Q Consensus 122 ~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~ 201 (415)
.|+++|.+..++++..++.. . ...+++|+|||+|.+|+|+|..+.+ .
T Consensus 158 ~p~i~g~~~~~v~~~~~~~~----~---------~~~~~~vvViGgG~ig~E~A~~l~~--------------------~ 204 (499)
T 1xdi_A 158 ILPSAQPDGERILTWRQLYD----L---------DALPDHLIVVGSGVTGAEFVDAYTE--------------------L 204 (499)
T ss_dssp CCGGGCCCSSSEEEGGGGGG----C---------SSCCSSEEEESCSHHHHHHHHHHHH--------------------T
T ss_pred CCCCCCCCcCcEEehhHhhh----h---------hccCCeEEEECCCHHHHHHHHHHHH--------------------c
Confidence 88899987666776655432 1 1146899999999999999999986 3
Q ss_pred CcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCce
Q 014990 202 SIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQR 281 (415)
Q Consensus 202 ~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (415)
+ .+|+++.+++.+...+ ++ .+...+.+.+. +.
T Consensus 205 g-~~Vtlv~~~~~~l~~~-d~---------------------------------~~~~~l~~~l~-------------~~ 236 (499)
T 1xdi_A 205 G-VPVTVVASQDHVLPYE-DA---------------------------------DAALVLEESFA-------------ER 236 (499)
T ss_dssp T-CCEEEECSSSSSSCCS-SH---------------------------------HHHHHHHHHHH-------------HT
T ss_pred C-CeEEEEEcCCcccccc-CH---------------------------------HHHHHHHHHHH-------------HC
Confidence 4 5899999987542211 11 11122223332 56
Q ss_pred eEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcc--cCCCC
Q 014990 282 ELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPF--DNHKG 359 (415)
Q Consensus 282 ~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~--~~~~g 359 (415)
||+++++..+.++. . +++.+ .++. ++++++++|.||+|+|++|+. ++ .+..|
T Consensus 237 GV~i~~~~~V~~i~--~-~~~~v-~v~~------------------~~g~~i~aD~Vv~a~G~~p~~----~~l~l~~~g 290 (499)
T 1xdi_A 237 GVRLFKNARAASVT--R-TGAGV-LVTM------------------TDGRTVEGSHALMTIGSVPNT----SGLGLERVG 290 (499)
T ss_dssp TCEEETTCCEEEEE--E-CSSSE-EEEE------------------TTSCEEEESEEEECCCEEECC----SSSCTTTTT
T ss_pred CCEEEeCCEEEEEE--E-eCCEE-EEEE------------------CCCcEEEcCEEEECCCCCcCC----CcCCchhcC
Confidence 89999999998886 3 23322 2221 122379999999999999976 22 35668
Q ss_pred ccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 360 IVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 360 ~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+.++++|++.+|+. ++|+.|+|||+|||+..+. +...|+.||+.+|.+|..
T Consensus 291 l~~~~~G~i~Vd~~--~~t~~~~IyA~GD~~~~~~-l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 291 IQLGRGNYLTVDRV--SRTLATGIYAAGDCTGLLP-LASVAAMQGRIAMYHALG 341 (499)
T ss_dssp CCCBTTTBCCCCSS--SBCSSTTEEECSGGGTSCS-CHHHHHHHHHHHHHHHTT
T ss_pred ceECCCCCEEECCC--cccCCCCEEEEeccCCCcc-cHHHHHHHHHHHHHHhcC
Confidence 88888899999987 8899999999999986554 455799999999999874
No 54
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=6.4e-30 Score=260.24 Aligned_cols=290 Identities=16% Similarity=0.160 Sum_probs=192.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcC--------CCCCCCccc-------------------------cCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR--------LPTPFGLVR-------------------------SGV 64 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~--------~~~~gg~~~-------------------------~~~ 64 (415)
..++|+||||||||+++|..|++.| .+|+|||+ ...+||.+. +++
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G--~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 82 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLG--KKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGW 82 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCc
Confidence 5689999999999999999999999 99999997 445676321 122
Q ss_pred CC---CCcchHHHHH-----------HHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCC
Q 014990 65 AP---DHPETKIVIN-----------QFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 65 ~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~ 122 (415)
.. .......+.. .+...++..+++++.+.... ..+...++ ...||+||||||+ .|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs-~p~~ 161 (488)
T 3dgz_A 83 EVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGG-RPRY 161 (488)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCE-EECC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCC-CCCC
Confidence 11 1111111111 12334555678887665431 12333332 3579999999998 7888
Q ss_pred CC-CCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcC
Q 014990 123 LG-IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS 201 (415)
Q Consensus 123 ~~-i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~ 201 (415)
|+ +||.+.. ..++.++.. . ...+++|+|||+|.+|+|+|..|.+ .
T Consensus 162 p~~i~G~~~~-~~~~~~~~~----~---------~~~~~~vvViGgG~ig~E~A~~l~~--------------------~ 207 (488)
T 3dgz_A 162 PTQVKGALEY-GITSDDIFW----L---------KESPGKTLVVGASYVALECAGFLTG--------------------I 207 (488)
T ss_dssp CSSCBTHHHH-CBCHHHHTT----C---------SSCCCSEEEECCSHHHHHHHHHHHH--------------------T
T ss_pred CCCCCCcccc-cCcHHHHHh----h---------hhcCCeEEEECCCHHHHHHHHHHHH--------------------c
Confidence 88 9987422 233333221 1 1146789999999999999999986 3
Q ss_pred CcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCce
Q 014990 202 SIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQR 281 (415)
Q Consensus 202 ~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (415)
+ .+|+++.|+..+ ..+ +++ +...+.+.+. +.
T Consensus 208 g-~~Vtlv~~~~~l-~~~-d~~---------------------------------~~~~l~~~l~-------------~~ 238 (488)
T 3dgz_A 208 G-LDTTVMMRSIPL-RGF-DQQ---------------------------------MSSLVTEHME-------------SH 238 (488)
T ss_dssp T-CCEEEEESSCSS-TTS-CHH---------------------------------HHHHHHHHHH-------------HT
T ss_pred C-CceEEEEcCccc-ccC-CHH---------------------------------HHHHHHHHHH-------------HC
Confidence 4 589999886421 111 111 1112223332 56
Q ss_pred eEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCcc
Q 014990 282 ELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIV 361 (415)
Q Consensus 282 ~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~ 361 (415)
||+++++..+.++. . .++....+++.+. ..|+..++++|.||+|+|++|+. ..+. ....++.
T Consensus 239 gv~~~~~~~v~~i~--~-~~~~~~~v~~~~~-------------~~g~~~~~~~D~vi~a~G~~p~~-~~l~-l~~~g~~ 300 (488)
T 3dgz_A 239 GTQFLKGCVPSHIK--K-LPTNQLQVTWEDH-------------ASGKEDTGTFDTVLWAIGRVPET-RTLN-LEKAGIS 300 (488)
T ss_dssp TCEEEETEEEEEEE--E-CTTSCEEEEEEET-------------TTTEEEEEEESEEEECSCEEESC-GGGT-GGGGTCC
T ss_pred CCEEEeCCEEEEEE--E-cCCCcEEEEEEeC-------------CCCeeEEEECCEEEEcccCCccc-CcCC-ccccCcE
Confidence 89999998888886 3 2222223444331 02444578999999999999976 1111 2456778
Q ss_pred cc-CCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 362 PN-IRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 362 ~~-~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++ ++|++.+|++ ++|+.|||||+|||+.+.......|+.||+.+|.+|..
T Consensus 301 ~~~~~G~i~vd~~--~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 301 TNPKNQKIIVDAQ--EATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp BCSSSCCBCCCTT--SBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHS
T ss_pred ecCCCCeEeECCC--CccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcC
Confidence 88 7899999987 88999999999999755555566899999999999864
No 55
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.97 E-value=1.2e-30 Score=262.97 Aligned_cols=283 Identities=11% Similarity=0.165 Sum_probs=191.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-cCCCCC-------------------C--------c
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPD-------------------H--------P 69 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-~~~~~~-------------------~--------~ 69 (415)
..++|+|||||+||+++|.+|++.+ .+|+|||++ .+||.+. .++.|. + .
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g--~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 79 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYG--QKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKF 79 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTT--CCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCC--CeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 4579999999999999999999998 999999998 4565421 110000 0 0
Q ss_pred chHH-----------HHHHHHHHhhccCeEEEeceEec---eEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeee
Q 014990 70 ETKI-----------VINQFSRVVQHERCSFFGNVTLG---SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHS 135 (415)
Q Consensus 70 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~---~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~ 135 (415)
.... +...+...++..+++++.+.... +.+.++.....||+||+|||+ .|..|++||.+ .+.+
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs-~p~~p~i~g~~--~~~~ 156 (450)
T 1ges_A 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGG-RPSHPDIPGVE--YGID 156 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETTEEEEEEEEEECCCE-EECCCCSTTGG--GSBC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECCEEEEeCEEEECCCC-CCCCCCCCCcc--ceec
Confidence 0111 11122334456688888775431 234443334589999999999 67888899874 3444
Q ss_pred chhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcc
Q 014990 136 AREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (415)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~ 215 (415)
..++.. +. ..+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|++.+
T Consensus 157 ~~~~~~-~~------------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~ 202 (450)
T 1ges_A 157 SDGFFA-LP------------ALPERVAVVGAGYIGVELGGVING--------------------LG-AKTHLFEMFDAP 202 (450)
T ss_dssp HHHHHH-CS------------SCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSS
T ss_pred HHHhhh-hh------------hcCCeEEEECCCHHHHHHHHHHHh--------------------cC-CEEEEEEeCCch
Confidence 444432 11 147899999999999999999986 34 589999988654
Q ss_pred cCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccccccc
Q 014990 216 QAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFL 295 (415)
Q Consensus 216 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~ 295 (415)
...+.. .+...+.+.+. +.||+++++..+.++.
T Consensus 203 l~~~~~----------------------------------~~~~~l~~~l~-------------~~Gv~i~~~~~v~~i~ 235 (450)
T 1ges_A 203 LPSFDP----------------------------------MISETLVEVMN-------------AEGPQLHTNAIPKAVV 235 (450)
T ss_dssp STTSCH----------------------------------HHHHHHHHHHH-------------HHSCEEECSCCEEEEE
T ss_pred hhhhhH----------------------------------HHHHHHHHHHH-------------HCCCEEEeCCEEEEEE
Confidence 221111 11122223332 5689999999998886
Q ss_pred ccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCC
Q 014990 296 ESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGD 375 (415)
Q Consensus 296 ~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~ 375 (415)
. +++....+++. +|+ ++++|.||+|+|++|+. ..+ ..+..|+.++++|++.+|+.
T Consensus 236 --~-~~~~~~~v~~~----------------~g~--~i~~D~vv~a~G~~p~~-~~l-~~~~~gl~~~~~g~i~vd~~-- 290 (450)
T 1ges_A 236 --K-NTDGSLTLELE----------------DGR--SETVDCLIWAIGREPAN-DNI-NLEAAGVKTNEKGYIVVDKY-- 290 (450)
T ss_dssp --E-CTTSCEEEEET----------------TSC--EEEESEEEECSCEEESC-TTS-CHHHHTCCBCTTSCBCCCTT--
T ss_pred --E-eCCcEEEEEEC----------------CCc--EEEcCEEEECCCCCcCC-CCC-CchhcCceECCCCCEeECCC--
Confidence 3 22221223321 232 79999999999999965 111 12345677888899999987
Q ss_pred CCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 376 SSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 376 ~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 291 ~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 291 QNTNIEGIYAVGDNTGAVE-LTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp SBCSSTTEEECSGGGTSCC-CHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEEeccCCCCc-cHHHHHHHHHHHHHHHcC
Confidence 7899999999999986544 455799999999999864
No 56
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=6.4e-30 Score=260.96 Aligned_cols=282 Identities=13% Similarity=0.187 Sum_probs=187.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCCCC-CcchH
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVAPD-HPETK 72 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~~~-~~~~~ 72 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+++ .||.+. +++... .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g--~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHN--AKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 378999999999999999999998 9999999985 555421 121100 00111
Q ss_pred -----------HHHHHHHHHhhccCeEEEeceEec---eEEEecc--------------cccccCEEEEccCCCCCCCCC
Q 014990 73 -----------IVINQFSRVVQHERCSFFGNVTLG---SSVSLSE--------------LRQLYHVVVLAYGAESDRALG 124 (415)
Q Consensus 73 -----------~~~~~~~~~~~~~~~~~~~~~~v~---~~v~~~~--------------~~~~~d~lvlAtG~~~~~~~~ 124 (415)
.+...+...++..+++++.+..+. +.+.+.. ....||+||+|||+ .|..|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs-~p~~p~ 157 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGN-KPVFPP 157 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCC-CBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCC-CCCCCC
Confidence 111223445566789888775431 1233321 23589999999999 678888
Q ss_pred CCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcc
Q 014990 125 IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR 204 (415)
Q Consensus 125 i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (415)
+||.+ .+.++.++.. +..+++|+|||+|.+|+|+|..|.+ .+ .
T Consensus 158 i~G~~--~~~~~~~~~~--------------~~~~~~vvViGgG~ig~E~A~~l~~--------------------~g-~ 200 (500)
T 1onf_A 158 VKGIE--NTISSDEFFN--------------IKESKKIGIVGSGYIAVELINVIKR--------------------LG-I 200 (500)
T ss_dssp CTTGG--GCEEHHHHTT--------------CCCCSEEEEECCSHHHHHHHHHHHT--------------------TT-C
T ss_pred CCCCC--cccCHHHHhc--------------cCCCCeEEEECChHHHHHHHHHHHH--------------------cC-C
Confidence 99874 3444443321 1127899999999999999999986 34 5
Q ss_pred eEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEE
Q 014990 205 KVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELH 284 (415)
Q Consensus 205 ~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~ 284 (415)
+|+++.|++.+...+. ++ +...+.+.+. +.||+
T Consensus 201 ~Vtlv~~~~~~l~~~d-~~---------------------------------~~~~l~~~l~-------------~~gv~ 233 (500)
T 1onf_A 201 DSYIFARGNRILRKFD-ES---------------------------------VINVLENDMK-------------KNNIN 233 (500)
T ss_dssp EEEEECSSSSSCTTSC-HH---------------------------------HHHHHHHHHH-------------HTTCE
T ss_pred eEEEEecCCccCcccc-hh---------------------------------hHHHHHHHHH-------------hCCCE
Confidence 8999999875432111 11 1112223332 56899
Q ss_pred EEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccC
Q 014990 285 FVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNI 364 (415)
Q Consensus 285 ~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~ 364 (415)
++++..+.++. . .++....+.+. +|+. ++++|.||+|+|++|+. ..+ .....|+.+ +
T Consensus 234 i~~~~~v~~i~--~-~~~~~~~v~~~----------------~g~~-~~~~D~vi~a~G~~p~~-~~l-~~~~~g~~~-~ 290 (500)
T 1onf_A 234 IVTFADVVEIK--K-VSDKNLSIHLS----------------DGRI-YEHFDHVIYCVGRSPDT-ENL-KLEKLNVET-N 290 (500)
T ss_dssp EECSCCEEEEE--E-SSTTCEEEEET----------------TSCE-EEEESEEEECCCBCCTT-TTS-SCTTTTCCB-S
T ss_pred EEECCEEEEEE--E-cCCceEEEEEC----------------CCcE-EEECCEEEECCCCCcCC-CCC-CchhcCccc-c
Confidence 99999998886 3 22221223321 2332 39999999999999975 111 135667777 7
Q ss_pred CCceeeccCCCCCcccCCeeeeecccc---------------------------------CCccchhhhhhhHHHHHhhc
Q 014990 365 RGRVLKNISGDSSQVENGLYVCGWLKR---------------------------------GPTGIIATNLYCAEETVSSL 411 (415)
Q Consensus 365 ~G~i~v~~~~~~~t~~p~vfaiGD~~~---------------------------------~~~~~~~~a~~~g~~~a~~i 411 (415)
+|++.+|+. ++|+.|||||+|||+. +.......|+.||+.+|.+|
T Consensus 291 ~G~i~vd~~--~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 368 (500)
T 1onf_A 291 NNYIVVDEN--QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRL 368 (500)
T ss_dssp SSCEEECTT--CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCC--cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHH
Confidence 899999987 7899999999999981 23345668999999999998
Q ss_pred cc
Q 014990 412 SL 413 (415)
Q Consensus 412 ~~ 413 (415)
..
T Consensus 369 ~g 370 (500)
T 1onf_A 369 FL 370 (500)
T ss_dssp HS
T ss_pred hC
Confidence 63
No 57
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.97 E-value=4.6e-30 Score=261.33 Aligned_cols=285 Identities=18% Similarity=0.241 Sum_probs=193.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCCceEEEEc--------CCCCCCCccc-------------------------cC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIID--------RLPTPFGLVR-------------------------SG 63 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~-~g~~~~v~lie--------~~~~~gg~~~-------------------------~~ 63 (415)
..++|+|||||+||+++|.+|++ .| .+|+||| +.+.+||... ++
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G--~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g 79 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHK--KRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFG 79 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHC--CCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcC--CEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999 98 9999999 3556677432 11
Q ss_pred CCCC----CcchHHHH-----------HHHHHHhhcc-CeEEEeceEec---eEEEec-----cc----ccccCEEEEcc
Q 014990 64 VAPD----HPETKIVI-----------NQFSRVVQHE-RCSFFGNVTLG---SSVSLS-----EL----RQLYHVVVLAY 115 (415)
Q Consensus 64 ~~~~----~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~v~---~~v~~~-----~~----~~~~d~lvlAt 115 (415)
+... ......+. ..+...++.. +++++.+.... ..+.+. ++ ...||+|||||
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 80 WELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp EECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred cccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 1000 00111111 2234445667 89988876432 133332 22 35899999999
Q ss_pred CCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHH
Q 014990 116 GAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAW 195 (415)
Q Consensus 116 G~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~ 195 (415)
|+ .|+.|++||.+ .+++..++.. . ...+++++|||+|.+|+|+|..|.+
T Consensus 160 Gs-~p~~p~i~g~~--~~~~~~~~~~----~---------~~~~~~vvViGgG~ig~E~A~~l~~--------------- 208 (490)
T 1fec_A 160 GS-WPQHLGIEGDD--LCITSNEAFY----L---------DEAPKRALCVGGGYISIEFAGIFNA--------------- 208 (490)
T ss_dssp CE-EECCCCSBTGG--GCBCHHHHTT----C---------SSCCSEEEEECSSHHHHHHHHHHHH---------------
T ss_pred CC-CCCCCCCCCcc--ceecHHHHhh----h---------hhcCCeEEEECCCHHHHHHHHHHHh---------------
Confidence 99 67888888873 3444433321 1 1147899999999999999999985
Q ss_pred HHhhcC--CcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccC
Q 014990 196 TALEGS--SIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASAS 273 (415)
Q Consensus 196 ~~~~~~--~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~ 273 (415)
. ...+|+++.|++.+...+.. .+...+.+.+.
T Consensus 209 -----~~~~g~~Vtlv~~~~~~l~~~d~----------------------------------~~~~~l~~~l~------- 242 (490)
T 1fec_A 209 -----YKARGGQVDLAYRGDMILRGFDS----------------------------------ELRKQLTEQLR------- 242 (490)
T ss_dssp -----HSCTTCEEEEEESSSSSSTTSCH----------------------------------HHHHHHHHHHH-------
T ss_pred -----hccCcCeEEEEEcCCCcccccCH----------------------------------HHHHHHHHHHH-------
Confidence 2 13589999998754221111 11112222332
Q ss_pred CCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCc
Q 014990 274 SQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLP 353 (415)
Q Consensus 274 ~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~ 353 (415)
+.||+++++..+.++. . +++....+++. +|+ ++++|.||+|+|++|+. ..+
T Consensus 243 ------~~GV~i~~~~~v~~i~--~-~~~~~~~v~~~----------------~G~--~i~~D~vv~a~G~~p~~-~~L- 293 (490)
T 1fec_A 243 ------ANGINVRTHENPAKVT--K-NADGTRHVVFE----------------SGA--EADYDVVMLAIGRVPRS-QTL- 293 (490)
T ss_dssp ------HTTEEEEETCCEEEEE--E-CTTSCEEEEET----------------TSC--EEEESEEEECSCEEESC-TTS-
T ss_pred ------hCCCEEEeCCEEEEEE--E-cCCCEEEEEEC----------------CCc--EEEcCEEEEccCCCcCc-ccc-
Confidence 5689999999999986 3 22222233321 232 79999999999999975 112
Q ss_pred ccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 354 FDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 354 ~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
.....|+.++++|++.+|+. ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 294 ~l~~~gl~~~~~G~I~Vd~~--~~t~~~~IyA~GD~~~~~~-l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 294 QLEKAGVEVAKNGAIKVDAY--SKTNVDNIYAIGDVTDRVM-LTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CGGGGTCCBCTTSCBCCCTT--CBCSSTTEEECGGGGCSCC-CHHHHHHHHHHHHHHHHS
T ss_pred CchhcCccCCCCCCEEECCC--CccCCCCEEEEeccCCCcc-CHHHHHHHHHHHHHHhcC
Confidence 13456788888899999987 8899999999999986443 555799999999999864
No 58
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.97 E-value=1.6e-30 Score=264.79 Aligned_cols=286 Identities=15% Similarity=0.167 Sum_probs=189.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCCCCC--cch
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVAPDH--PET 71 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~~~~--~~~ 71 (415)
.++|+||||||||+++|..|++.| .+|+|||+++ +||... +++.... ...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G--~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHT--DKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTC--SCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCH
Confidence 479999999999999999999999 9999999975 666421 1211100 111
Q ss_pred HHHHHHHH-----------HHhhcc-CeEEEeceEe---ceEEEeccc-ccccCEEEEccCCCCCCCCCCCCCCCCCeee
Q 014990 72 KIVINQFS-----------RVVQHE-RCSFFGNVTL---GSSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHS 135 (415)
Q Consensus 72 ~~~~~~~~-----------~~~~~~-~~~~~~~~~v---~~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~ 135 (415)
.++..++. ..+... ++.++.+... ...+.+++. ...||+||||||+ .|+.|++++.....+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs-~p~~p~~~~~~~~~v~t 163 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGS-RPNYPEFLAAAGSRLLT 163 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCE-ECCCCHHHHTTGGGEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCC-CCcCCCCCCccCCcEEc
Confidence 22222211 111111 2333333221 234455333 4589999999998 67777766654556666
Q ss_pred chhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcc
Q 014990 136 AREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (415)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~ 215 (415)
+.++.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|++.+
T Consensus 164 ~~~~~~----~---------~~~~k~vvViGgG~ig~E~A~~l~~--------------------~g-~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 164 NDNLFE----L---------NDLPKSVAVFGPGVIGLELGQALSR--------------------LG-VIVKVFGRSGSV 209 (492)
T ss_dssp HHHHTT----C---------SSCCSEEEEESSCHHHHHHHHHHHH--------------------TT-CEEEEECCTTCC
T ss_pred HHHHhh----h---------hhcCCeEEEECCCHHHHHHHHHHHH--------------------cC-CeEEEEEECCcc
Confidence 654432 1 1147999999999999999999986 34 579999998765
Q ss_pred cCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccccccc
Q 014990 216 QAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFL 295 (415)
Q Consensus 216 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~ 295 (415)
...+ ++++ ...+.+.+. +. |+++++..+.++.
T Consensus 210 l~~~-d~~~---------------------------------~~~l~~~l~-------------~~-V~i~~~~~v~~i~ 241 (492)
T 3ic9_A 210 ANLQ-DEEM---------------------------------KRYAEKTFN-------------EE-FYFDAKARVISTI 241 (492)
T ss_dssp TTCC-CHHH---------------------------------HHHHHHHHH-------------TT-SEEETTCEEEEEE
T ss_pred cccC-CHHH---------------------------------HHHHHHHHh-------------hC-cEEEECCEEEEEE
Confidence 3211 1111 111222221 34 8999998888886
Q ss_pred ccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeec-cCC
Q 014990 296 ESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKN-ISG 374 (415)
Q Consensus 296 ~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~-~~~ 374 (415)
. .++.+ .+++.+ .+|+.+++++|.||+|+|++|+. ..+. ....|+.++++|++.+| ++
T Consensus 242 --~-~~~~v-~v~~~~--------------~~G~~~~i~~D~Vi~a~G~~p~~-~~l~-l~~~gl~~~~~G~i~vd~~~- 300 (492)
T 3ic9_A 242 --E-KEDAV-EVIYFD--------------KSGQKTTESFQYVLAATGRKANV-DKLG-LENTSIELDKKNSPLFDELT- 300 (492)
T ss_dssp --E-CSSSE-EEEEEC--------------TTCCEEEEEESEEEECSCCEESC-SSSC-GGGSCCCBCTTCCBCCCTTT-
T ss_pred --E-cCCEE-EEEEEe--------------CCCceEEEECCEEEEeeCCccCC-CCCC-hhhcCCEECCCCCEeECccc-
Confidence 3 23333 233321 03444689999999999999976 1111 35568888989999999 54
Q ss_pred CCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 375 DSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 375 ~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++|+.|||||+|||+..+. +...|+.||+.||.+|..
T Consensus 301 -~~t~~~~IyA~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 301 -LQTSVDHIFVAGDANNTLT-LLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp -CBCSSTTEEECGGGGTSSC-SHHHHHHHHHHHHHHHHH
T ss_pred -ccCCCCCEEEEEecCCCCc-cHHHHHHHHHHHHHHHcC
Confidence 8999999999999986554 455799999999999875
No 59
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.97 E-value=3.4e-30 Score=260.65 Aligned_cols=287 Identities=17% Similarity=0.196 Sum_probs=191.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-cCCCCC-------------------------CcchH
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPD-------------------------HPETK 72 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-~~~~~~-------------------------~~~~~ 72 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+.+ +||... .+..|. .....
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g--~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLG--LKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 578999999999999999999998 9999999987 565321 111010 00111
Q ss_pred HHH-------H----HHHHHhhccCeEEEeceEec---eEEEecccccccCEEEEccCCCCCCCCC-CCCCCCCCeeech
Q 014990 73 IVI-------N----QFSRVVQHERCSFFGNVTLG---SSVSLSELRQLYHVVVLAYGAESDRALG-IPGEDLIGVHSAR 137 (415)
Q Consensus 73 ~~~-------~----~~~~~~~~~~~~~~~~~~v~---~~v~~~~~~~~~d~lvlAtG~~~~~~~~-i~g~~~~~v~~~~ 137 (415)
.+. + .+...++..+++++.+..+. +.+.+......||+||+|||+ .|+.|+ +++. ..+++..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g~~~~~d~lViATGs-~p~~p~gi~~~--~~v~~~~ 159 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGS-EPLELKGFPFG--EDVWDST 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCE-EECCBTTBCCS--SSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEccEEEEeCEEEEcCCC-CCCCCCCCCCC--CcEEcHH
Confidence 111 1 12344566789988776542 234443224589999999999 566665 6662 2455554
Q ss_pred hhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccC
Q 014990 138 EFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (415)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~ 217 (415)
++.. +.. ..+++|+|||+|.+|+|+|..|.+ .+ .+|+++.+++.+..
T Consensus 160 ~~~~-l~~-----------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 160 RALK-VEE-----------GLPKRLLVIGGGAVGLELGQVYRR--------------------LG-AEVTLIEYMPEILP 206 (464)
T ss_dssp HHTC-GGG-----------CCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSSST
T ss_pred HHHh-hhh-----------hcCCEEEEECCCHHHHHHHHHHHH--------------------CC-CeEEEEEcCCcccc
Confidence 4332 110 036899999999999999999986 34 58999999865421
Q ss_pred CCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccccccccc
Q 014990 218 ACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLES 297 (415)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~ 297 (415)
.+ ++ .+...+.+.+. +.||+++++..+.++.
T Consensus 207 ~~-~~---------------------------------~~~~~l~~~l~-------------~~gV~i~~~~~v~~i~-- 237 (464)
T 2eq6_A 207 QG-DP---------------------------------ETAALLRRALE-------------KEGIRVRTKTKAVGYE-- 237 (464)
T ss_dssp TS-CH---------------------------------HHHHHHHHHHH-------------HTTCEEECSEEEEEEE--
T ss_pred cc-CH---------------------------------HHHHHHHHHHH-------------hcCCEEEcCCEEEEEE--
Confidence 11 11 11112222232 5689999999998886
Q ss_pred CCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCC
Q 014990 298 NERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSS 377 (415)
Q Consensus 298 ~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~ 377 (415)
. +++.+ .+++.+. .+|+.+++++|.||+|+|++|+. ..+ ..+..|+.++++|++.+|++ ++
T Consensus 238 ~-~~~~~-~v~~~~~-------------~~g~~~~i~~D~vv~a~G~~p~~-~~l-~l~~~g~~~~~~G~i~vd~~--~~ 298 (464)
T 2eq6_A 238 K-KKDGL-HVRLEPA-------------EGGEGEEVVVDKVLVAVGRKPRT-EGL-GLEKAGVKVDERGFIRVNAR--ME 298 (464)
T ss_dssp E-ETTEE-EEEEEET-------------TCCSCEEEEESEEEECSCEEESC-TTS-SHHHHTCCBCTTSCBCCCTT--CB
T ss_pred E-eCCEE-EEEEeec-------------CCCceeEEEcCEEEECCCcccCC-CCC-ChhhcCceecCCCCEEECCC--cc
Confidence 3 22222 3433210 01444479999999999999975 111 12345677777899999987 88
Q ss_pred cccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 378 QVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 378 t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
|+.|||||+|||+..+. +...|+.||+.+|.+|..
T Consensus 299 t~~~~Iya~GD~~~~~~-l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 299 TSVPGVYAIGDAARPPL-LAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CSSTTEEECGGGTCSSC-CHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeccCCCcc-cHHHHHHHHHHHHHHhcC
Confidence 99999999999986554 455799999999999864
No 60
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.97 E-value=4.5e-30 Score=267.26 Aligned_cols=291 Identities=16% Similarity=0.199 Sum_probs=199.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC---CCCC--cchHHHHHHHHHHhhccCeEEE
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDH--PETKIVINQFSRVVQHERCSFF 90 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
.+.+++|||||||+||++||.+|++.+++.+|+|||+++.++.. ..+. ..+. .....+..++..+.++.++.++
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~-~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~ 111 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFA-NCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIR 111 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC-GGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEE
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcccc-CCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEE
Confidence 45678999999999999999999999555999999999876521 1110 0111 1111223345556667788887
Q ss_pred eceEece------EEEec---cc---ccccCEEEEccCCCCCCCCCCCCC-CCCCeeechhhHHHhc--CCCCCCCCCCC
Q 014990 91 GNVTLGS------SVSLS---EL---RQLYHVVVLAYGAESDRALGIPGE-DLIGVHSAREFVWWYN--GHPDGKNLSPD 155 (415)
Q Consensus 91 ~~~~v~~------~v~~~---~~---~~~~d~lvlAtG~~~~~~~~i~g~-~~~~v~~~~~~~~~~~--~~~~~~~~~~~ 155 (415)
.+..+.. .+.+. .. ...||+||+|||+ .|+.|++||. +.+++++...+..... ....
T Consensus 112 ~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~------- 183 (588)
T 3ics_A 112 VLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA-KPIVPSIPGIEEAKALFTLRNVPDTDRIKAYID------- 183 (588)
T ss_dssp CSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCTTTTTCTTEEECSSHHHHHHHHHHHH-------
T ss_pred ECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC-CCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHh-------
Confidence 7766521 23332 12 3479999999999 7888899998 6777776654332210 0000
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeE
Q 014990 156 LKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYV 235 (415)
Q Consensus 156 ~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~ 235 (415)
-..+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|++.+...+..
T Consensus 184 ~~~~~~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~~-------------- 228 (588)
T 3ics_A 184 EKKPRHATVIGGGFIGVEMVENLRE--------------------RG-IEVTLVEMANQVMPPIDY-------------- 228 (588)
T ss_dssp HHCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSSCTTSCH--------------
T ss_pred hcCCCeEEEECCCHHHHHHHHHHHh--------------------CC-CeEEEEecCCcccccCCH--------------
Confidence 0147999999999999999999986 34 589999988754322111
Q ss_pred EEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeec
Q 014990 236 HIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALK 315 (415)
Q Consensus 236 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~ 315 (415)
. +...+.+.+. +.||+++++..+.++. . ++. .+.+.
T Consensus 229 ---------------~-----~~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~--~~~--~v~~~----- 264 (588)
T 3ics_A 229 ---------------E-----MAAYVHEHMK-------------NHDVELVFEDGVDALE--E--NGA--VVRLK----- 264 (588)
T ss_dssp ---------------H-----HHHHHHHHHH-------------HTTCEEECSCCEEEEE--G--GGT--EEEET-----
T ss_pred ---------------H-----HHHHHHHHHH-------------HcCCEEEECCeEEEEe--c--CCC--EEEEC-----
Confidence 1 1112222332 5689999999888886 3 221 33331
Q ss_pred CCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeecccc----
Q 014990 316 GGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKR---- 391 (415)
Q Consensus 316 ~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~---- 391 (415)
+| +++++|.||+|+|++|+. ++.+..|+.++++|++.+|+. ++|+.|||||+|||+.
T Consensus 265 -----------~g--~~i~~D~Vi~a~G~~p~~----~~l~~~g~~~~~~g~i~vd~~--~~t~~~~IyA~GD~~~~~~~ 325 (588)
T 3ics_A 265 -----------SG--SVIQTDMLILAIGVQPES----SLAKGAGLALGVRGTIKVNEK--FQTSDPHIYAIGDAIEVKDF 325 (588)
T ss_dssp -----------TS--CEEECSEEEECSCEEECC----HHHHHTTCCBCGGGCBCCCTT--SBCSSTTEEECGGGBCEEBT
T ss_pred -----------CC--CEEEcCEEEEccCCCCCh----HHHHhcCceEcCCCCEEECCc--cccCCCCEEEeeeeeecccc
Confidence 23 279999999999999975 344566788888999999987 8999999999999983
Q ss_pred --CC---ccchhhhhhhHHHHHhhccc
Q 014990 392 --GP---TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 392 --~~---~~~~~~a~~~g~~~a~~i~~ 413 (415)
+. ......|+.||+.+|.+|..
T Consensus 326 ~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 326 VTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp TTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCcccccccHHHHHHHHHHHHHHhcC
Confidence 21 23455799999999999875
No 61
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=3.4e-30 Score=258.26 Aligned_cols=290 Identities=17% Similarity=0.170 Sum_probs=192.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc-cc--cCCCCCCcchHHHHHHHHHHhhccCeEEEeceEe
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-VR--SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
.++|+|||||+||+++|..|++.+.+.+|+|||+.+..+.. .. .....+......+.....+.+++.+++++.++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 57999999999999999999999944489999998754311 10 0111111111111111123345678988887654
Q ss_pred c------eEEEeccc-ccccCEEEEccCCCCCCCCCCCCCCCCC---eeechhh--HHHhcCCCCCCCCCCCCCCCCeEE
Q 014990 96 G------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIG---VHSAREF--VWWYNGHPDGKNLSPDLKSTDTAV 163 (415)
Q Consensus 96 ~------~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~~~---v~~~~~~--~~~~~~~~~~~~~~~~~~~~k~V~ 163 (415)
. +.+.+.++ ...||+||+|||+ .|+.|++||.+.++ +++.... ...+... +..+++|+
T Consensus 84 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~-~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~---------l~~~~~vv 153 (431)
T 1q1r_A 84 TAINRDRQQVILSDGRALDYDRLVLATGG-RPRPLPVASGAVGKANNFRYLRTLEDAECIRRQ---------LIADNRLV 153 (431)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCE-EECCCGGGTTHHHHSTTEEESSSHHHHHHHHHT---------CCTTCEEE
T ss_pred EEEECCCCEEEECCCCEEECCEEEEcCCC-CccCCCCCCcccCCCceEEEECCHHHHHHHHHH---------hhcCCeEE
Confidence 2 23555444 3589999999999 78888899876444 6543222 1122211 22589999
Q ss_pred EEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccC
Q 014990 164 ILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLI 243 (415)
Q Consensus 164 VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (415)
|||+|.+|+|+|..|.+ .+ .+|+++.+.+.+......+++
T Consensus 154 ViGgG~~g~E~A~~l~~--------------------~G-~~Vtlv~~~~~~l~~~~~~~~------------------- 193 (431)
T 1q1r_A 154 VIGGGYIGLEVAATAIK--------------------AN-MHVTLLDTAARVLERVTAPPV------------------- 193 (431)
T ss_dssp EECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSTTTTTSCHHH-------------------
T ss_pred EECCCHHHHHHHHHHHh--------------------CC-CEEEEEEeCCccccchhhHHH-------------------
Confidence 99999999999999986 34 589999988654221111111
Q ss_pred CCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCC-CCCCeeeEEEeeeeecCCCCCcc
Q 014990 244 KSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNE-RSGHVSGVHFEKTALKGGGPGKQ 322 (415)
Q Consensus 244 ~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~-~~~~v~~v~~~~~~~~~~~~g~~ 322 (415)
...+.+.+. +.||+++++..+.++. .. +++.+..+.+.
T Consensus 194 --------------~~~l~~~l~-------------~~GV~i~~~~~v~~i~--~~~~~~~v~~v~~~------------ 232 (431)
T 1q1r_A 194 --------------SAFYEHLHR-------------EAGVDIRTGTQVCGFE--MSTDQQKVTAVLCE------------ 232 (431)
T ss_dssp --------------HHHHHHHHH-------------HHTCEEECSCCEEEEE--ECTTTCCEEEEEET------------
T ss_pred --------------HHHHHHHHH-------------hCCeEEEeCCEEEEEE--eccCCCcEEEEEeC------------
Confidence 111222222 5589999999888886 20 13445444432
Q ss_pred eeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCcc-------
Q 014990 323 YAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTG------- 395 (415)
Q Consensus 323 ~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~------- 395 (415)
+| ++++||.||+|+|++|+. ++....|+.++ +| +.+|+. ++|+.|+|||+|||+..+..
T Consensus 233 ----~G--~~i~~D~Vv~a~G~~p~~----~l~~~~gl~~~-~g-i~Vd~~--~~ts~~~IyA~GD~~~~~~~~~g~~~~ 298 (431)
T 1q1r_A 233 ----DG--TRLPADLVIAGIGLIPNC----ELASAAGLQVD-NG-IVINEH--MQTSDPLIMAVGDCARFHSQLYDRWVR 298 (431)
T ss_dssp ----TS--CEEECSEEEECCCEEECC----HHHHHTTCCBS-SS-EECCTT--SBCSSTTEEECGGGEEEEETTTTEEEE
T ss_pred ----CC--CEEEcCEEEECCCCCcCc----chhhccCCCCC-CC-EEECCC--cccCCCCEEEEEeEEEEccccCCceEe
Confidence 22 379999999999999965 34455666665 45 889886 88999999999999864421
Q ss_pred --chhhhhhhHHHHHhhccc
Q 014990 396 --IIATNLYCAEETVSSLSL 413 (415)
Q Consensus 396 --~~~~a~~~g~~~a~~i~~ 413 (415)
....|+.||+.+|.+|..
T Consensus 299 ~~~~~~A~~qg~~aa~~i~g 318 (431)
T 1q1r_A 299 IESVPNALEQARKIAAILCG 318 (431)
T ss_dssp CCSHHHHHHHHHHHHHHHTT
T ss_pred eCHHHHHHHHHHHHHHHhcC
Confidence 234799999999999864
No 62
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.97 E-value=1.4e-29 Score=257.40 Aligned_cols=284 Identities=14% Similarity=0.161 Sum_probs=190.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCCC--CCcch
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVAP--DHPET 71 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~~--~~~~~ 71 (415)
.++|+|||||+||+++|..|++.+ .+|+|||+.+.+||... +++.. .....
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G--~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEG--LKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 578999999999999999999998 99999999877765321 11100 00111
Q ss_pred HHHH-----------HHHHHHhhccCeEEEeceEec---eEEEe--cc-------------cccccCEEEEccCCCCCCC
Q 014990 72 KIVI-----------NQFSRVVQHERCSFFGNVTLG---SSVSL--SE-------------LRQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 72 ~~~~-----------~~~~~~~~~~~~~~~~~~~v~---~~v~~--~~-------------~~~~~d~lvlAtG~~~~~~ 122 (415)
..+. ..+...++..+++++.+..+. ..+.+ .+ ....||+||+|||+ .|+.
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs-~p~~ 162 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGS-RVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCE-EECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCC-CCCC
Confidence 1111 123345566788888776432 12222 12 23579999999999 5666
Q ss_pred CC-CCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcC
Q 014990 123 LG-IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS 201 (415)
Q Consensus 123 ~~-i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~ 201 (415)
|+ ++ .+. .+.+..++.. . ...+++|+|||+|.+|+|+|..|.+ .
T Consensus 163 ~~~i~-~~~-~v~~~~~~~~----~---------~~~~~~vvViGgG~ig~E~A~~l~~--------------------~ 207 (482)
T 1ojt_A 163 LPFIP-EDP-RIIDSSGALA----L---------KEVPGKLLIIGGGIIGLEMGTVYST--------------------L 207 (482)
T ss_dssp CSSCC-CCT-TEECHHHHTT----C---------CCCCSEEEEESCSHHHHHHHHHHHH--------------------H
T ss_pred CCCCC-ccC-cEEcHHHHhc----c---------cccCCeEEEECCCHHHHHHHHHHHH--------------------c
Confidence 55 55 222 4555444321 1 1147999999999999999999986 3
Q ss_pred CcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCce
Q 014990 202 SIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQR 281 (415)
Q Consensus 202 ~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (415)
+ .+|+++.|++.+...+. + + +...+.+.+. +.
T Consensus 208 G-~~Vtlv~~~~~~l~~~~-~----------------------------~-----~~~~l~~~l~-------------~~ 239 (482)
T 1ojt_A 208 G-SRLDVVEMMDGLMQGAD-R----------------------------D-----LVKVWQKQNE-------------YR 239 (482)
T ss_dssp T-CEEEEECSSSSSSTTSC-H----------------------------H-----HHHHHHHHHG-------------GG
T ss_pred C-CeEEEEEECCccccccC-H----------------------------H-----HHHHHHHHHH-------------hc
Confidence 4 58999999875432111 1 1 1111222221 67
Q ss_pred eEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcc--cCCCC
Q 014990 282 ELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPF--DNHKG 359 (415)
Q Consensus 282 ~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~--~~~~g 359 (415)
||+++++..+.++. . ++....+++.+. .++++++++|.||+|+|++|+. ++ .+..|
T Consensus 240 gV~i~~~~~v~~i~--~--~~~~~~v~~~~~--------------~~~g~~~~~D~vv~a~G~~p~~----~~l~~~~~g 297 (482)
T 1ojt_A 240 FDNIMVNTKTVAVE--P--KEDGVYVTFEGA--------------NAPKEPQRYDAVLVAAGRAPNG----KLISAEKAG 297 (482)
T ss_dssp EEEEECSCEEEEEE--E--ETTEEEEEEESS--------------SCCSSCEEESCEEECCCEEECG----GGTTGGGTT
T ss_pred CCEEEECCEEEEEE--E--cCCeEEEEEecc--------------CCCceEEEcCEEEECcCCCcCC----CCCChhhcC
Confidence 99999999999886 3 322223443320 1112368899999999999976 22 35667
Q ss_pred ccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 360 IVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 360 ~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+.++++|++.+|++ ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 298 l~~~~~G~i~vd~~--~~t~~~~IyA~GD~~~~~~-l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 298 VAVTDRGFIEVDKQ--MRTNVPHIYAIGDIVGQPM-LAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CCCCTTSCCCCCTT--SBCSSTTEEECGGGTCSSC-CHHHHHHHHHHHHHHHTT
T ss_pred ceeCCCCCEeeCCC--cccCCCCEEEEEcccCCCc-cHHHHHHHHHHHHHHHcC
Confidence 88888899999986 8899999999999986554 455799999999999864
No 63
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.97 E-value=1.4e-29 Score=252.00 Aligned_cols=276 Identities=19% Similarity=0.223 Sum_probs=189.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHH-------HHHHHhhccCeEEE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVIN-------QFSRVVQHERCSFF 90 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 90 (415)
..++|+|||||+||+++|..|++.+++.+|+|||+.+.++.. . +. ..+.+.. .+. .+++.+++++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~----~-~~--~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 77 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD----R-PP--LSKDFMAHGDAEKIRLD-CKRAPEVEWL 77 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC----S-GG--GGTHHHHHCCGGGSBCC-CTTSCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCccc----C-CC--CCHHHhCCCchhhhhHH-HHHHCCCEEE
Confidence 568999999999999999999999944579999998764311 1 00 0011110 001 3456688888
Q ss_pred eceEec------eEEEeccc-ccccCEEEEccCCCCCCCCCC-CCCCCCCeeechhhH--HHhcCCCCCCCCCCCCCCCC
Q 014990 91 GNVTLG------SSVSLSEL-RQLYHVVVLAYGAESDRALGI-PGEDLIGVHSAREFV--WWYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 91 ~~~~v~------~~v~~~~~-~~~~d~lvlAtG~~~~~~~~i-~g~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~k 160 (415)
.++.+. +.+.+.++ ...||+||+|||+ .|+.|++ ||.+ +++++..... ..+... +..++
T Consensus 78 ~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~-~~~~~~i~~G~~-~~v~~~~~~~~~~~l~~~---------~~~~~ 146 (408)
T 2gqw_A 78 LGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGA-APRALPTLQGAT-MPVHTLRTLEDARRIQAG---------LRPQS 146 (408)
T ss_dssp ETCCEEEEETTTTEEEETTSCEEECSEEEECCCE-EECCCGGGTTCS-SCEEECCSHHHHHHHHTT---------CCTTC
T ss_pred cCCEEEEEECCCCEEEECCCCEEECCEEEECCCC-CCCCCCccCCCC-CcEEEECCHHHHHHHHHH---------hhcCC
Confidence 886431 23555444 3589999999999 7888888 9987 6776543322 222221 22589
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEccc
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRED 240 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (415)
+|+|||+|.+|+|+|..|.+ .+ .+|+++.+++.+.....++++
T Consensus 147 ~vvViGgG~~g~E~A~~l~~--------------------~g-~~Vtlv~~~~~~l~~~~~~~~---------------- 189 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATART--------------------AG-VHVSLVETQPRLMSRAAPATL---------------- 189 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSSSSSTTTSCHHH----------------
T ss_pred eEEEECCCHHHHHHHHHHHh--------------------CC-CEEEEEEeCCcccccccCHHH----------------
Confidence 99999999999999999986 34 589999998754321111111
Q ss_pred ccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCC
Q 014990 241 DLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPG 320 (415)
Q Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g 320 (415)
...+.+.+. +.||+++++..+.++. ++ .+++.
T Consensus 190 -----------------~~~l~~~l~-------------~~GV~i~~~~~v~~i~-----~~---~v~~~---------- 221 (408)
T 2gqw_A 190 -----------------ADFVARYHA-------------AQGVDLRFERSVTGSV-----DG---VVLLD---------- 221 (408)
T ss_dssp -----------------HHHHHHHHH-------------HTTCEEEESCCEEEEE-----TT---EEEET----------
T ss_pred -----------------HHHHHHHHH-------------HcCcEEEeCCEEEEEE-----CC---EEEEC----------
Confidence 112222332 5689999998888874 22 34331
Q ss_pred cceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCc------
Q 014990 321 KQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPT------ 394 (415)
Q Consensus 321 ~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~------ 394 (415)
+| ++++||.||+|+|++|+. ++....|+..+ +| +.+|++ ++|+.|+|||+|||+..+.
T Consensus 222 ------~g--~~i~~D~vi~a~G~~p~~----~l~~~~gl~~~-~g-i~Vd~~--~~t~~~~IyA~GD~~~~~~~~~g~~ 285 (408)
T 2gqw_A 222 ------DG--TRIAADMVVVGIGVLAND----ALARAAGLACD-DG-IFVDAY--GRTTCPDVYALGDVTRQRNPLSGRF 285 (408)
T ss_dssp ------TS--CEEECSEEEECSCEEECC----HHHHHHTCCBS-SS-EECCTT--CBCSSTTEEECGGGEEEEETTTTEE
T ss_pred ------CC--CEEEcCEEEECcCCCccH----HHHHhCCCCCC-CC-EEECCC--CccCCCCEEEEEEEEEecCccCCce
Confidence 23 379999999999999975 34444566665 56 999986 8899999999999986442
Q ss_pred ---cchhhhhhhHHHHHhhccc
Q 014990 395 ---GIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 395 ---~~~~~a~~~g~~~a~~i~~ 413 (415)
.....|+.||+.+|.+|..
T Consensus 286 ~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 286 ERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp ECCCCHHHHHHHHHHHHHHHHC
T ss_pred eeccHHHHHHHHHHHHHHHhcC
Confidence 1344799999999999864
No 64
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=2.8e-29 Score=255.19 Aligned_cols=290 Identities=17% Similarity=0.197 Sum_probs=191.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC---C------CCCCccc-------------------------c
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL---P------TPFGLVR-------------------------S 62 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~---~------~~gg~~~-------------------------~ 62 (415)
+..++|+||||||||+++|..|++.| .+|+|||+. + .+||.+. +
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNG--ARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC--CEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999 999999942 1 2555421 2
Q ss_pred CCCC---CCcchHHHHH-----------HHHHHhhccCeEEEeceEec-----eEEEeccc--ccccCEEEEccCCCCCC
Q 014990 63 GVAP---DHPETKIVIN-----------QFSRVVQHERCSFFGNVTLG-----SSVSLSEL--RQLYHVVVLAYGAESDR 121 (415)
Q Consensus 63 ~~~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~--~~~~d~lvlAtG~~~~~ 121 (415)
++.. .......+.. .....++..+++++.+...- ..+...+. ...||+||||||+ .|+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs-~p~ 163 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGG-RPR 163 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCE-EEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCC-CcC
Confidence 2211 0111112211 12233455678887665431 12333333 3589999999998 788
Q ss_pred CCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcC
Q 014990 122 ALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS 201 (415)
Q Consensus 122 ~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~ 201 (415)
.|++||.+.. ..++.++.. . ...+++|+|||+|.+|+|+|..|.+ .
T Consensus 164 ~p~i~G~~~~-~~~~~~~~~----~---------~~~~~~vvViGgG~~g~E~A~~l~~--------------------~ 209 (483)
T 3dgh_A 164 YPDIPGAVEY-GITSDDLFS----L---------DREPGKTLVVGAGYIGLECAGFLKG--------------------L 209 (483)
T ss_dssp CCSSTTHHHH-CBCHHHHTT----C---------SSCCCEEEEECCSHHHHHHHHHHHH--------------------T
T ss_pred CCCCCCcccc-cCcHHHHhh----h---------hhcCCcEEEECCCHHHHHHHHHHHH--------------------c
Confidence 8899987532 233333221 1 1147899999999999999999986 3
Q ss_pred CcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCce
Q 014990 202 SIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQR 281 (415)
Q Consensus 202 ~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (415)
+ .+|+++.|+.. ...+ +++ +...+.+.+. +.
T Consensus 210 g-~~Vtlv~~~~~-l~~~-d~~---------------------------------~~~~l~~~l~-------------~~ 240 (483)
T 3dgh_A 210 G-YEPTVMVRSIV-LRGF-DQQ---------------------------------MAELVAASME-------------ER 240 (483)
T ss_dssp T-CEEEEEESSCS-STTS-CHH---------------------------------HHHHHHHHHH-------------HT
T ss_pred C-CEEEEEeCCCC-Cccc-CHH---------------------------------HHHHHHHHHH-------------hC
Confidence 4 58999988532 1111 111 1112223332 56
Q ss_pred eEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCcc
Q 014990 282 ELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIV 361 (415)
Q Consensus 282 ~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~ 361 (415)
||+++++..+.++. ..+++.+ .+++.+. . +++..++++|.||+|+|++|+. ..+. ....|+.
T Consensus 241 Gv~i~~~~~v~~i~--~~~~~~~-~v~~~~~--------~-----~~~~~~~~~D~vi~a~G~~p~~-~~l~-l~~~gl~ 302 (483)
T 3dgh_A 241 GIPFLRKTVPLSVE--KQDDGKL-LVKYKNV--------E-----TGEESEDVYDTVLWAIGRKGLV-DDLN-LPNAGVT 302 (483)
T ss_dssp TCCEEETEEEEEEE--ECTTSCE-EEEEEET--------T-----TCCEEEEEESEEEECSCEEECC-GGGT-GGGTTCC
T ss_pred CCEEEeCCEEEEEE--EcCCCcE-EEEEecC--------C-----CCceeEEEcCEEEECcccccCc-CcCC-chhcCcc
Confidence 89999999888886 3123333 3555431 1 3455689999999999999975 1111 1456788
Q ss_pred ccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 362 PNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 362 ~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+++ |++.+|++ ++|+.|||||+|||+.+.......|+.||+.+|.+|..
T Consensus 303 ~~~-G~i~vd~~--~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 303 VQK-DKIPVDSQ--EATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp CBT-TBBCCCTT--CBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHS
T ss_pred ccC-CEEEECcC--CccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcC
Confidence 887 99999987 78999999999999855445566799999999999864
No 65
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.97 E-value=2.5e-29 Score=257.68 Aligned_cols=290 Identities=14% Similarity=0.155 Sum_probs=189.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC--------CCCCccc-------------------------cCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP--------TPFGLVR-------------------------SGV 64 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~--------~~gg~~~-------------------------~~~ 64 (415)
..++|+||||||||+++|..|++.| .+|+|||+.+ .+||... +++
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G--~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~ 108 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYG--KKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGW 108 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCc
Confidence 4689999999999999999999999 9999999864 5666421 121
Q ss_pred CC---CCcchHHHHH-----------HHHHHhhccCeEEEeceEec-----eEEEeccc---ccccCEEEEccCCCCCCC
Q 014990 65 AP---DHPETKIVIN-----------QFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 65 ~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~-----~~v~~~~~---~~~~d~lvlAtG~~~~~~ 122 (415)
.. .......+.. .+...++..+++++.+...- ..+...++ ...||+||||||+ .|+.
T Consensus 109 ~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs-~p~~ 187 (519)
T 3qfa_A 109 KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGE-RPRY 187 (519)
T ss_dssp CCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCE-EECC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCC-CcCC
Confidence 11 0111111111 12234555688887775431 12333333 3579999999999 7888
Q ss_pred CCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCC
Q 014990 123 LGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS 202 (415)
Q Consensus 123 ~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~ 202 (415)
|++||.+. .+.+..++.. . ...+++|+|||+|++|+|+|..|.+ .+
T Consensus 188 p~i~G~~~-~~~t~~~~~~----l---------~~~~~~vvVIGgG~ig~E~A~~l~~--------------------~G 233 (519)
T 3qfa_A 188 LGIPGDKE-YCISSDDLFS----L---------PYCPGKTLVVGASYVALECAGFLAG--------------------IG 233 (519)
T ss_dssp CCCTTHHH-HCBCHHHHTT----C---------SSCCCSEEEECCSHHHHHHHHHHHH--------------------TT
T ss_pred CCCCCccC-ceEcHHHHhh----h---------hhcCCeEEEECCcHHHHHHHHHHHH--------------------cC
Confidence 89998642 2333333221 1 1146789999999999999999986 34
Q ss_pred cceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCcee
Q 014990 203 IRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRE 282 (415)
Q Consensus 203 ~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 282 (415)
.+|+++.|+. +...+ ++++ ...+.+.+. +.|
T Consensus 234 -~~Vtlv~~~~-~l~~~-d~~~---------------------------------~~~~~~~l~-------------~~G 264 (519)
T 3qfa_A 234 -LDVTVMVRSI-LLRGF-DQDM---------------------------------ANKIGEHME-------------EHG 264 (519)
T ss_dssp -CCEEEEESSC-SSTTS-CHHH---------------------------------HHHHHHHHH-------------HTT
T ss_pred -CeEEEEeccc-ccccC-CHHH---------------------------------HHHHHHHHH-------------HCC
Confidence 5899998853 21111 1111 112222232 568
Q ss_pred EEEEeccccccccccCCCCC--CeeeEEEeeeeecCCCCCcceeccCC-ceEEEecCeeEEeeccCCccCCCCcccCCCC
Q 014990 283 LHFVFFRKPDSFLESNERSG--HVSGVHFEKTALKGGGPGKQYAVGTG-EFEDLDCGMVLKSIGYKSVPVNGLPFDNHKG 359 (415)
Q Consensus 283 v~~~~~~~~~~v~~~~~~~~--~v~~v~~~~~~~~~~~~g~~~~~~~g-~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g 359 (415)
|+++++..+.++. ...++ ....+++... .+ +..++++|.||+|+|++|+. ..+. ....|
T Consensus 265 V~v~~~~~v~~v~--~~~~~~~~~~~v~~~~~--------------~g~~~~~~~~D~vi~a~G~~p~~-~~l~-l~~~g 326 (519)
T 3qfa_A 265 IKFIRQFVPIKVE--QIEAGTPGRLRVVAQST--------------NSEEIIEGEYNTVMLAIGRDACT-RKIG-LETVG 326 (519)
T ss_dssp CEEEESEEEEEEE--EEECCTTCEEEEEEEES--------------SSSCEEEEEESEEEECSCEEESC-SSSC-STTTT
T ss_pred CEEEeCCeEEEEE--EccCCCCceEEEEEEEC--------------CCcEEEEEECCEEEEecCCcccC-CCCC-hhhcC
Confidence 9999987777665 20111 1112322211 22 33578999999999999976 2121 35667
Q ss_pred cccc-CCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 360 IVPN-IRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 360 ~~~~-~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+.++ ++|++.+|++ ++|+.|||||+|||+.+.......|+.||+.+|.+|..
T Consensus 327 l~~~~~~G~I~Vd~~--~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 327 VKINEKTGKIPVTDE--EQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp CCCCTTTCCBCCCTT--SBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHS
T ss_pred cEEcCCCCeEeeCCC--CccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 8887 5799999987 88999999999999855555666899999999999863
No 66
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.97 E-value=2e-29 Score=254.87 Aligned_cols=283 Identities=14% Similarity=0.144 Sum_probs=191.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCCCC--Ccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVAPD--HPE 70 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~~~--~~~ 70 (415)
+.++|+|||||+||+++|.+|++.+ .+|+|||+. .+||.+. +++... ...
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g--~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFG--KRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLD 79 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCC--CcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcC
Confidence 4689999999999999999999998 999999998 4565421 111100 001
Q ss_pred hHHH-----------HHHHHHHhhccCeEEEeceEe---ceEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeec
Q 014990 71 TKIV-----------INQFSRVVQHERCSFFGNVTL---GSSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSA 136 (415)
Q Consensus 71 ~~~~-----------~~~~~~~~~~~~~~~~~~~~v---~~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~ 136 (415)
...+ ...+...++..+++++.+... .+.+.++.....||+||+|||+ .|+.|++||.+ .+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs-~p~~p~i~G~~--~~~~~ 156 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGG-RPIVPRLPGAE--LGITS 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCE-EECCCSCTTGG--GSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECCEEEEcCEEEECCCC-CCCCCCCCCcc--ceecH
Confidence 1111 112233445678888877543 1234443334589999999999 67888899873 34444
Q ss_pred hhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCccc
Q 014990 137 REFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (415)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~ 216 (415)
.++.. +. ..+++|+|||+|.+|+|+|..|.+ .+ .+|+++.|++.+.
T Consensus 157 ~~~~~-~~------------~~~~~vvVvGgG~~g~e~A~~l~~--------------------~G-~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 157 DGFFA-LQ------------QQPKRVAIIGAGYIGIELAGLLRS--------------------FG-SEVTVVALEDRLL 202 (463)
T ss_dssp HHHHH-CS------------SCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSSS
T ss_pred HHHhh-hh------------ccCCEEEEECCCHHHHHHHHHHHh--------------------cC-CEEEEEEcCCccc
Confidence 44332 10 147899999999999999999986 34 5899999986542
Q ss_pred CCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccc
Q 014990 217 AACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLE 296 (415)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~ 296 (415)
..+.. + ....+.+.+. +.||+++++..+.++.
T Consensus 203 ~~~~~-~---------------------------------~~~~l~~~l~-------------~~gv~i~~~~~v~~i~- 234 (463)
T 2r9z_A 203 FQFDP-L---------------------------------LSATLAENMH-------------AQGIETHLEFAVAALE- 234 (463)
T ss_dssp TTSCH-H---------------------------------HHHHHHHHHH-------------HTTCEEESSCCEEEEE-
T ss_pred cccCH-H---------------------------------HHHHHHHHHH-------------HCCCEEEeCCEEEEEE-
Confidence 21111 1 1111222222 5689999999888886
Q ss_pred cCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCC
Q 014990 297 SNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDS 376 (415)
Q Consensus 297 ~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~ 376 (415)
. +++. ..+++. +|+. ++++|.||+|+|++|+. ..+. ....|+.++++|++.+|+. +
T Consensus 235 -~-~~~~-~~v~~~----------------~G~~-~i~~D~vv~a~G~~p~~-~~l~-~~~~g~~~~~~G~i~vd~~--~ 290 (463)
T 2r9z_A 235 -R-DAQG-TTLVAQ----------------DGTR-LEGFDSVIWAVGRAPNT-RDLG-LEAAGIEVQSNGMVPTDAY--Q 290 (463)
T ss_dssp -E-ETTE-EEEEET----------------TCCE-EEEESEEEECSCEEESC-TTSC-HHHHTCCCCTTSCCCCCTT--S
T ss_pred -E-eCCe-EEEEEe----------------CCcE-EEEcCEEEECCCCCcCC-CCCC-chhcCCccCCCCCEeECCC--C
Confidence 3 2222 223221 3332 69999999999999965 1111 2344677788899999987 7
Q ss_pred CcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 377 SQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 377 ~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|+.|||||+|||...+. ....|+.||+.+|.+|..
T Consensus 291 ~t~~~~Iya~GD~~~~~~-~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 291 NTNVPGVYALGDITGRDQ-LTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp BCSSTTEEECGGGGTSCC-CHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeecCCCcc-cHHHHHHHHHHHHHHHcC
Confidence 899999999999986543 455799999999999863
No 67
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.97 E-value=6.2e-30 Score=258.66 Aligned_cols=283 Identities=15% Similarity=0.148 Sum_probs=191.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCCC--CCcc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVAP--DHPE 70 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~~--~~~~ 70 (415)
..++|+|||||+||+++|..|++.| .+|+|||+ +.+||.+. +++.. ....
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G--~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALG--KKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFD 80 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTT--CCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCC--CEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcC
Confidence 3579999999999999999999999 99999999 56676321 11100 0001
Q ss_pred hH-----------HHHHHHHHHhhccCeEEEeceEe---ceEEEe--cccccccCEEEEccCCCCCC-CCCCCCCCCCCe
Q 014990 71 TK-----------IVINQFSRVVQHERCSFFGNVTL---GSSVSL--SELRQLYHVVVLAYGAESDR-ALGIPGEDLIGV 133 (415)
Q Consensus 71 ~~-----------~~~~~~~~~~~~~~~~~~~~~~v---~~~v~~--~~~~~~~d~lvlAtG~~~~~-~~~i~g~~~~~v 133 (415)
.. .+...+...++..+++++.+... ...+.. +.....||+||+|||+ .|. .|++||.+ .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~-~p~~~p~i~G~~--~~ 157 (463)
T 4dna_A 81 WAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGG-HPSPHDALPGHE--LC 157 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCE-EECCCTTSTTGG--GC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCC-CcccCCCCCCcc--cc
Confidence 11 12223344556668888877543 223444 2234589999999999 677 88888875 23
Q ss_pred eechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
+++.++.. . ...+++++|||+|.+|+|+|..+.+ .+ .+|+++.+.+
T Consensus 158 ~~~~~~~~----~---------~~~~~~v~ViGgG~~g~e~A~~l~~--------------------~g-~~Vt~v~~~~ 203 (463)
T 4dna_A 158 ITSNEAFD----L---------PALPESILIAGGGYIAVEFANIFHG--------------------LG-VKTTLIYRGK 203 (463)
T ss_dssp BCHHHHTT----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSS
T ss_pred ccHHHHhh----h---------hcCCCeEEEECCCHHHHHHHHHHHH--------------------cC-CeEEEEEcCC
Confidence 44333321 1 1147999999999999999999986 34 5899999886
Q ss_pred cccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccccc
Q 014990 214 PVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDS 293 (415)
Q Consensus 214 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 293 (415)
.+...+.. + +...+.+.+. +.|++++++..+.+
T Consensus 204 ~~l~~~~~-~---------------------------------~~~~l~~~l~-------------~~Gv~i~~~~~v~~ 236 (463)
T 4dna_A 204 EILSRFDQ-D---------------------------------MRRGLHAAME-------------EKGIRILCEDIIQS 236 (463)
T ss_dssp SSSTTSCH-H---------------------------------HHHHHHHHHH-------------HTTCEEECSCCEEE
T ss_pred ccccccCH-H---------------------------------HHHHHHHHHH-------------HCCCEEECCCEEEE
Confidence 54321111 1 1112222332 56899999999888
Q ss_pred ccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccC
Q 014990 294 FLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNIS 373 (415)
Q Consensus 294 v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~ 373 (415)
+. . .++....++. . .+| + +++|.||+|+|++|+.. .+. ....|+.++++|++.+|+.
T Consensus 237 i~--~-~~~~~~~v~~-~--------------~~g--~-i~aD~Vv~a~G~~p~~~-~l~-l~~~g~~~~~~G~i~vd~~ 293 (463)
T 4dna_A 237 VS--A-DADGRRVATT-M--------------KHG--E-IVADQVMLALGRMPNTN-GLG-LEAAGVRTNELGAIIVDAF 293 (463)
T ss_dssp EE--E-CTTSCEEEEE-S--------------SSC--E-EEESEEEECSCEEESCT-TSS-TGGGTCCBCTTSCBCCCTT
T ss_pred EE--E-cCCCEEEEEE-c--------------CCC--e-EEeCEEEEeeCcccCCC-CCC-ccccCceECCCCCEeECcC
Confidence 86 3 2222212320 0 023 3 99999999999999752 111 3456788888999999987
Q ss_pred CCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 374 GDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 374 ~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 294 --~~t~~~~iya~GD~~~~~~-~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 294 --SRTSTPGIYALGDVTDRVQ-LTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp --CBCSSTTEEECSGGGSSCC-CHHHHHHHHHHHHHHHHS
T ss_pred --CCCCCCCEEEEEecCCCCC-ChHHHHHHHHHHHHHHcC
Confidence 7899999999999986444 455799999999999864
No 68
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=7e-30 Score=250.64 Aligned_cols=276 Identities=19% Similarity=0.220 Sum_probs=183.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc---cccCCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL---VRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
...+|+||||||||+++|..|++.+ +|+|||+++..+.. +.... .+.....++.....+.++..+++++.++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g---~V~lie~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~~~~~~v~~~~g~~ 82 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY---EVTVIDKEPVPYYSKPMLSHYI-AGFIPRNRLFPYSLDWYRKRGIEIRLAEE 82 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS---EEEEECSSSSCCCCSTTHHHHH-TTSSCGGGGCSSCHHHHHHHTEEEECSCC
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC---CEEEEECCCCCccccchhHHHH-hCCCCHHHhccCCHHHHHhCCcEEEECCE
Confidence 3568999999999999999998875 99999998764310 10001 11112222222233445567899888754
Q ss_pred ec------eEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHH--hcCCCCCCCCCCCCCCCCeEEEEc
Q 014990 95 LG------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWW--YNGHPDGKNLSPDLKSTDTAVILG 166 (415)
Q Consensus 95 v~------~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~k~V~VVG 166 (415)
+. +.++.+.....||+||||||+ .|+.|++|| .+++++...+... +... +.++++|+|||
T Consensus 83 v~~id~~~~~V~~~g~~~~~d~lViATGs-~p~~p~i~G--~~~v~~~~~~~~~~~l~~~---------~~~~~~vvViG 150 (367)
T 1xhc_A 83 AKLIDRGRKVVITEKGEVPYDTLVLATGA-RAREPQIKG--KEYLLTLRTIFDADRIKES---------IENSGEAIIIG 150 (367)
T ss_dssp EEEEETTTTEEEESSCEEECSEEEECCCE-EECCCCSBT--GGGEECCCSHHHHHHHHHH---------HHHHSEEEEEE
T ss_pred EEEEECCCCEEEECCcEEECCEEEECCCC-CCCCCCCCC--cCCEEEEcCHHHHHHHHHH---------hhcCCcEEEEC
Confidence 31 234422234589999999999 788888998 3456554332221 1100 11358999999
Q ss_pred CChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCC
Q 014990 167 QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSP 246 (415)
Q Consensus 167 ~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p 246 (415)
+|.+|+|+|..|.+ .+ .+|+++.|++.+.. .+++
T Consensus 151 gG~~g~E~A~~l~~--------------------~g-~~Vtlv~~~~~~l~--~~~~----------------------- 184 (367)
T 1xhc_A 151 GGFIGLELAGNLAE--------------------AG-YHVKLIHRGAMFLG--LDEE----------------------- 184 (367)
T ss_dssp CSHHHHHHHHHHHH--------------------TT-CEEEEECSSSCCTT--CCHH-----------------------
T ss_pred CCHHHHHHHHHHHh--------------------CC-CEEEEEeCCCeecc--CCHH-----------------------
Confidence 99999999999986 34 58999998865422 1111
Q ss_pred CcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceecc
Q 014990 247 TDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVG 326 (415)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~ 326 (415)
....+.+.+. +.||+++++..+.++. . + .+++.
T Consensus 185 ----------~~~~l~~~l~-------------~~gV~i~~~~~v~~i~--~--~----~v~~~---------------- 217 (367)
T 1xhc_A 185 ----------LSNMIKDMLE-------------ETGVKFFLNSELLEAN--E--E----GVLTN---------------- 217 (367)
T ss_dssp ----------HHHHHHHHHH-------------HTTEEEECSCCEEEEC--S--S----EEEET----------------
T ss_pred ----------HHHHHHHHHH-------------HCCCEEEcCCEEEEEE--e--e----EEEEC----------------
Confidence 1122223332 5689999998888774 2 2 23321
Q ss_pred CCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccC--C-ccchhhhhhh
Q 014990 327 TGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRG--P-TGIIATNLYC 403 (415)
Q Consensus 327 ~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~--~-~~~~~~a~~~ 403 (415)
+| + +++|.||+|+|++|+. ++.+..++..+ +| +.+|++ ++|+.|||||+|||+.. + ......|+.|
T Consensus 218 ~g--~-i~~D~vi~a~G~~p~~----~ll~~~gl~~~-~g-i~Vd~~--~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~q 286 (367)
T 1xhc_A 218 SG--F-IEGKVKICAIGIVPNV----DLARRSGIHTG-RG-ILIDDN--FRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQ 286 (367)
T ss_dssp TE--E-EECSCEEEECCEEECC----HHHHHTTCCBS-SS-EECCTT--SBCSSTTEEECGGGEEBTTBCCCSHHHHHHH
T ss_pred CC--E-EEcCEEEECcCCCcCH----HHHHhCCCCCC-CC-EEECCC--cccCCCCEEEeEeeeecCCCCccHHHHHHHH
Confidence 22 3 9999999999999975 34455566665 45 888886 88999999999999742 2 3456689999
Q ss_pred HHHHHhhccc
Q 014990 404 AEETVSSLSL 413 (415)
Q Consensus 404 g~~~a~~i~~ 413 (415)
|+.+|.+|..
T Consensus 287 g~~aa~~i~g 296 (367)
T 1xhc_A 287 ARVLADILKG 296 (367)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999999864
No 69
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=2.8e-29 Score=253.57 Aligned_cols=281 Identities=15% Similarity=0.168 Sum_probs=189.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc----------------------------cCCCCC--
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR----------------------------SGVAPD-- 67 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~----------------------------~~~~~~-- 67 (415)
..++|+||||||||+++|.+|++.+ .+|+|||+ +.+||.+. +++...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLG--IPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHT--CCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCC
Confidence 4589999999999999999999999 99999999 55665421 222110
Q ss_pred CcchHHHHH-----------HHHHHhhccCeEEEeceEec---eEEEecccccccCEEEEccCCCCCCCCC-CCCCCCCC
Q 014990 68 HPETKIVIN-----------QFSRVVQHERCSFFGNVTLG---SSVSLSELRQLYHVVVLAYGAESDRALG-IPGEDLIG 132 (415)
Q Consensus 68 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~---~~v~~~~~~~~~d~lvlAtG~~~~~~~~-i~g~~~~~ 132 (415)
......+.. .....++..+++++.+..+. +.+.+++....||+||||||+ .|+.|+ ++. +. .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~~~~d~lviATGs-~p~~~~~~~~-~~-~ 157 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGS-SSVELPMLPL-GG-P 157 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETTEEEECSEEEECCCE-EECCBTTBCC-BT-T
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEeeEEEEeCEEEEeCCC-CCCCCCCCCc-cC-c
Confidence 011112211 12345667789988877542 234554444589999999999 565554 552 22 4
Q ss_pred eeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeec
Q 014990 133 VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (415)
Q Consensus 133 v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~ 212 (415)
+.+..++.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++.++
T Consensus 158 v~~~~~~~~----~---------~~~~~~vvViGgG~~g~e~A~~l~~--------------------~g-~~Vtlv~~~ 203 (458)
T 1lvl_A 158 VISSTEALA----P---------KALPQHLVVVGGGYIGLELGIAYRK--------------------LG-AQVSVVEAR 203 (458)
T ss_dssp EECHHHHTC----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------HT-CEEEEECSS
T ss_pred EecHHHHhh----h---------hccCCeEEEECcCHHHHHHHHHHHH--------------------CC-CeEEEEEcC
Confidence 555443321 1 1147899999999999999999986 34 589999998
Q ss_pred CcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccc
Q 014990 213 GPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPD 292 (415)
Q Consensus 213 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (415)
+.+.. ..+++ +...+.+.+. +.||+++++..+.
T Consensus 204 ~~~l~-~~~~~---------------------------------~~~~l~~~l~-------------~~gv~i~~~~~v~ 236 (458)
T 1lvl_A 204 ERILP-TYDSE---------------------------------LTAPVAESLK-------------KLGIALHLGHSVE 236 (458)
T ss_dssp SSSST-TSCHH---------------------------------HHHHHHHHHH-------------HHTCEEETTCEEE
T ss_pred Ccccc-ccCHH---------------------------------HHHHHHHHHH-------------HCCCEEEECCEEE
Confidence 75422 11111 1112222232 5689999998888
Q ss_pred cccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeecc
Q 014990 293 SFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNI 372 (415)
Q Consensus 293 ~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~ 372 (415)
++. . +. +.+.. .+|+.+++++|.||+|+|++|+.. .+ ..+..|+.++++ .+.+|+
T Consensus 237 ~i~----~-~~---v~v~~--------------~~G~~~~i~~D~vv~a~G~~p~~~-~l-~~~~~g~~~~~~-~i~vd~ 291 (458)
T 1lvl_A 237 GYE----N-GC---LLAND--------------GKGGQLRLEADRVLVAVGRRPRTK-GF-NLECLDLKMNGA-AIAIDE 291 (458)
T ss_dssp EEE----T-TE---EEEEC--------------SSSCCCEECCSCEEECCCEEECCS-SS-SGGGSCCCEETT-EECCCT
T ss_pred EEE----e-CC---EEEEE--------------CCCceEEEECCEEEECcCCCcCCC-CC-CcHhcCCcccCC-EEeECC
Confidence 885 2 22 33321 023334799999999999999752 11 134567777766 899998
Q ss_pred CCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 373 SGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 373 ~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
. ++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 292 ~--~~t~~~~Iya~GD~~~~~~-~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 292 R--CQTSMHNVWAIGDVAGEPM-LAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp T--CBCSSTTEEECGGGGCSSC-CHHHHHHHHHHHHHHHTT
T ss_pred C--CcCCCCCEEEeeccCCCcc-cHHHHHHHHHHHHHHhcC
Confidence 7 7899999999999987554 455799999999999864
No 70
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=2.3e-29 Score=253.96 Aligned_cols=283 Identities=16% Similarity=0.212 Sum_probs=192.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCC-----------------------C--cchHH
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPD-----------------------H--PETKI 73 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~-----------------------~--~~~~~ 73 (415)
++|+||||||||+++|..|++.+ .+|+|||+++.+||.+.. +..|. . .....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLG--MKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCC--CeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHH
Confidence 68999999999999999999998 999999999877765321 11010 0 01111
Q ss_pred H-----------HHHHHHHhhccCeEEEeceEec---eEEEec--ccccccCEEEEccCCCCCCCCCCCCCCCCCeeech
Q 014990 74 V-----------INQFSRVVQHERCSFFGNVTLG---SSVSLS--ELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAR 137 (415)
Q Consensus 74 ~-----------~~~~~~~~~~~~~~~~~~~~v~---~~v~~~--~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~ 137 (415)
+ ...+...++..+++++.+..+. ..+.+. .....||+||+|||+ .|+.|+++|.+..++++..
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~-~p~~~~~~g~~~~~v~~~~ 158 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGS-APLIPPWAQVDYERVVTST 158 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCE-EECCCTTBCCCSSSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCC-CCCCCCCCCCCcCcEechH
Confidence 1 1122445566788888776541 122332 223589999999999 6888888887655666654
Q ss_pred hhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccC
Q 014990 138 EFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (415)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~ 217 (415)
++.. . ...+++|+|||+|.+|+|+|..|.+ .+ .+|+++.+++.+.
T Consensus 159 ~~~~----~---------~~~~~~vvIiGgG~~g~e~A~~l~~--------------------~g-~~V~lv~~~~~~l- 203 (455)
T 2yqu_A 159 EALS----F---------PEVPKRLIVVGGGVIGLELGVVWHR--------------------LG-AEVIVLEYMDRIL- 203 (455)
T ss_dssp HHTC----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSSC-
T ss_pred Hhhc----c---------ccCCCeEEEECCCHHHHHHHHHHHH--------------------cC-CEEEEEecCCccc-
Confidence 4331 1 1146899999999999999999986 34 4799999886532
Q ss_pred CCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEecccccccccc
Q 014990 218 ACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLES 297 (415)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~ 297 (415)
|.... .+...+.+.+. +.||+++++..+.++.
T Consensus 204 ----------------------------~~~~~-----~~~~~l~~~l~-------------~~Gv~i~~~~~V~~i~-- 235 (455)
T 2yqu_A 204 ----------------------------PTMDL-----EVSRAAERVFK-------------KQGLTIRTGVRVTAVV-- 235 (455)
T ss_dssp ----------------------------TTSCH-----HHHHHHHHHHH-------------HHTCEEECSCCEEEEE--
T ss_pred ----------------------------cccCH-----HHHHHHHHHHH-------------HCCCEEEECCEEEEEE--
Confidence 11111 11112222232 5589999999988886
Q ss_pred CCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCC
Q 014990 298 NERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSS 377 (415)
Q Consensus 298 ~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~ 377 (415)
. +++.+ .+++. ++ +++++|.||+|+|++|+.. .+ ..+..|+.++++|++.+|+. ++
T Consensus 236 ~-~~~~v-~v~~~----------------~g--~~i~~D~vv~A~G~~p~~~-~l-~~~~~g~~~~~~g~i~vd~~--~~ 291 (455)
T 2yqu_A 236 P-EAKGA-RVELE----------------GG--EVLEADRVLVAVGRRPYTE-GL-SLENAGLSTDERGRIPVDEH--LR 291 (455)
T ss_dssp E-ETTEE-EEEET----------------TS--CEEEESEEEECSCEEECCT-TC-CGGGGTCCCCTTSCCCCCTT--SB
T ss_pred E-eCCEE-EEEEC----------------CC--eEEEcCEEEECcCCCcCCC-CC-ChhhcCCccCCCCcEeECCC--cc
Confidence 3 22211 22211 12 3799999999999999651 11 12455677777899999987 78
Q ss_pred cccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 378 QVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 378 t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
|+.|+|||+|||+..+. +...|+.||+.+|.+|..
T Consensus 292 t~~~~iya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 292 TRVPHIYAIGDVVRGPM-LAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp CSSTTEEECGGGSSSCC-CHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEecCCCCcc-CHHHHHHhHHHHHHHHcC
Confidence 99999999999986554 455799999999999863
No 71
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.96 E-value=1.4e-29 Score=257.40 Aligned_cols=281 Identities=15% Similarity=0.152 Sum_probs=190.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-------------------------cCCCCCC--cch
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-------------------------SGVAPDH--PET 71 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-------------------------~~~~~~~--~~~ 71 (415)
.++|+|||||+||+++|..|++.| .+|+|||+ +.+||... +++.... ...
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G--~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALG--KRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTT--CCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCc--CEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 579999999999999999999999 99999999 55666421 1221110 011
Q ss_pred H-----------HHHHHHHHHhhccCeEEEeceEe---ceEEEe--cccccccCEEEEccCCCCCC-CCCCCCCCCCCee
Q 014990 72 K-----------IVINQFSRVVQHERCSFFGNVTL---GSSVSL--SELRQLYHVVVLAYGAESDR-ALGIPGEDLIGVH 134 (415)
Q Consensus 72 ~-----------~~~~~~~~~~~~~~~~~~~~~~v---~~~v~~--~~~~~~~d~lvlAtG~~~~~-~~~i~g~~~~~v~ 134 (415)
. .+...+...++..+++++.+... ...+.+ +.....||+||+|||+ .|. .|++||.+ .++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~-~p~~~p~i~G~~--~~~ 179 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGA-KIVSNSAIKGSD--LCL 179 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCE-EECCC--CBTGG--GSB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCC-CcccCCCCCCcc--ccc
Confidence 1 12223445566678888777543 123444 2234589999999999 677 78888875 233
Q ss_pred echhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 135 SAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
+..++.. . ...+++|+|||+|.+|+|+|..+.+ .+ .+|+++.+++.
T Consensus 180 ~~~~~~~----~---------~~~~~~v~ViGgG~~g~e~A~~l~~--------------------~g-~~Vtli~~~~~ 225 (484)
T 3o0h_A 180 TSNEIFD----L---------EKLPKSIVIVGGGYIGVEFANIFHG--------------------LG-VKTTLLHRGDL 225 (484)
T ss_dssp CTTTGGG----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSS
T ss_pred cHHHHHh----H---------HhcCCcEEEECcCHHHHHHHHHHHH--------------------cC-CeEEEEECCCc
Confidence 3333321 0 1147899999999999999999986 34 48999998865
Q ss_pred ccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccc
Q 014990 215 VQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSF 294 (415)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v 294 (415)
+...+.. .+...+.+.+. +.||+++++..+.++
T Consensus 226 ~l~~~~~----------------------------------~~~~~l~~~l~-------------~~Gv~i~~~~~V~~i 258 (484)
T 3o0h_A 226 ILRNFDY----------------------------------DLRQLLNDAMV-------------AKGISIIYEATVSQV 258 (484)
T ss_dssp SSTTSCH----------------------------------HHHHHHHHHHH-------------HHTCEEESSCCEEEE
T ss_pred cccccCH----------------------------------HHHHHHHHHHH-------------HCCCEEEeCCEEEEE
Confidence 4221111 11122223332 568999999999888
Q ss_pred cccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCC
Q 014990 295 LESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISG 374 (415)
Q Consensus 295 ~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~ 374 (415)
. . .++.+ .+++. +| +++++|.||+|+|++|+.. .+. ....|+.++++|++.+|+.
T Consensus 259 ~--~-~~~~v-~v~~~----------------~g--~~i~aD~Vi~A~G~~p~~~-~l~-l~~~g~~~~~~G~i~vd~~- 313 (484)
T 3o0h_A 259 Q--S-TENCY-NVVLT----------------NG--QTICADRVMLATGRVPNTT-GLG-LERAGVKVNEFGAVVVDEK- 313 (484)
T ss_dssp E--E-CSSSE-EEEET----------------TS--CEEEESEEEECCCEEECCT-TCC-HHHHTCCBCTTSCBCCCTT-
T ss_pred E--e-eCCEE-EEEEC----------------CC--cEEEcCEEEEeeCCCcCCC-CCC-hhhcCceECCCCCEeECCC-
Confidence 6 4 23333 33321 23 3799999999999999751 111 2345778888899999987
Q ss_pred CCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 375 DSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 375 ~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++|+.|||||+|||+..+. ....|+.||+.+|.+|..
T Consensus 314 -~~t~~~~Iya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 314 -MTTNVSHIWAVGDVTGHIQ-LTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp -SBCSSTTEEECGGGGTSCC-CHHHHHHHHHHHHHHHHC
T ss_pred -CCCCCCCEEEEEecCCCCc-CHHHHHHHHHHHHHHHcC
Confidence 7899999999999986444 455799999999999864
No 72
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=2.8e-28 Score=246.50 Aligned_cols=265 Identities=14% Similarity=0.065 Sum_probs=182.1
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCCce---EEEEcCCCCCCCccccCCC----------------------------
Q 014990 20 LRVCVVGSGPAGFYTAEKTLK---AHQEAQ---VDIIDRLPTPFGLVRSGVA---------------------------- 65 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~---~g~~~~---v~lie~~~~~gg~~~~~~~---------------------------- 65 (415)
++|+|||||+||+++|..|++ .| .+ |+|||+.+.+||.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G--~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG--AEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT--CCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC--CCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcc
Confidence 689999999999999999999 88 88 9999999988887764210
Q ss_pred --------------CCCcchHHHHHHHHHHhhccCeE--EEeceEec----------eEEEecc------cccccCEEEE
Q 014990 66 --------------PDHPETKIVINQFSRVVQHERCS--FFGNVTLG----------SSVSLSE------LRQLYHVVVL 113 (415)
Q Consensus 66 --------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~----------~~v~~~~------~~~~~d~lvl 113 (415)
+.+....++.+++.+.+++.++. +..++.|. ..++..+ ....||+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVv 160 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVC 160 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEE
Confidence 11122345666777777777765 66665441 1344433 2347999999
Q ss_pred ccCC-CCCCCCCCCCCCC-C-CeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCc
Q 014990 114 AYGA-ESDRALGIPGEDL-I-GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDI 190 (415)
Q Consensus 114 AtG~-~~~~~~~i~g~~~-~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~ 190 (415)
|||. ..|+.|++||.+. + .+.++.++.... ...+|+|+|||+|.+|+|+|.+|.+
T Consensus 161 AtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~------------~~~~k~VvVVG~G~sg~eiA~~l~~---------- 218 (464)
T 2xve_A 161 CTGHFSTPYVPEFEGFEKFGGRILHAHDFRDAL------------EFKDKTVLLVGSSYSAEDIGSQCYK---------- 218 (464)
T ss_dssp CCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGG------------GGTTSEEEEECCSTTHHHHHHHHHH----------
T ss_pred CCCCCCCCccCCCCCcccCCceEEehhhhCCHh------------HcCCCEEEEEcCCCCHHHHHHHHHH----------
Confidence 9995 3688889999763 3 355555443211 1268999999999999999999996
Q ss_pred hhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHh
Q 014990 191 ASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAA 270 (415)
Q Consensus 191 ~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~ 270 (415)
-.++|+++.|++... +..
T Consensus 219 -----------~g~~V~li~~~~~~~-----------------------------~~~---------------------- 236 (464)
T 2xve_A 219 -----------YGAKKLISCYRTAPM-----------------------------GYK---------------------- 236 (464)
T ss_dssp -----------TTCSEEEEECSSCCC-----------------------------CCC----------------------
T ss_pred -----------hCCeEEEEEECCCCC-----------------------------CCC----------------------
Confidence 346899999876421 000
Q ss_pred ccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCC
Q 014990 271 SASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVN 350 (415)
Q Consensus 271 ~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~ 350 (415)
...+|.++ ..+.++. . + +|.+. +|+ ++++|.||+|||++|+.
T Consensus 237 --------~~~~V~~~--~~V~~i~--~--~----~V~~~----------------dG~--~i~~D~Vi~atG~~p~~-- 278 (464)
T 2xve_A 237 --------WPENWDER--PNLVRVD--T--E----NAYFA----------------DGS--SEKVDAIILCTGYIHHF-- 278 (464)
T ss_dssp --------CCTTEEEC--SCEEEEC--S--S----EEEET----------------TSC--EEECSEEEECCCBCCCC--
T ss_pred --------CCCceEEc--CCeEEEe--C--C----EEEEC----------------CCC--EEeCCEEEECCCCCCCC--
Confidence 02346655 4555553 2 2 34432 233 68999999999999964
Q ss_pred CCcccCC-CCccccCCCcee-eccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 351 GLPFDNH-KGIVPNIRGRVL-KNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 351 ~~~~~~~-~g~~~~~~G~i~-v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
+|... .++.++++|++. ..... +.++.|+|||+||+..+. ....|..||+++|.+|..
T Consensus 279 --~~l~~~~gl~~~~~~~v~~~~~~~-~~t~~p~i~aiGd~~~~~--~~~~a~~qa~~~a~~l~G 338 (464)
T 2xve_A 279 --PFLNDDLRLVTNNRLWPLNLYKGV-VWEDNPKFFYIGMQDQWY--SFNMFDAQAWYARDVIMG 338 (464)
T ss_dssp --TTBCTTTCCCCCSSSCCSSEETTT-EESSSTTEEECSCSCCSS--CHHHHHHHHHHHHHHHTT
T ss_pred --CCcCcccccccCCCcccccccceE-ecCCCCCEEEEeCccccc--chHHHHHHHHHHHHHHcC
Confidence 34333 567777665652 22222 568999999999997543 345789999999998864
No 73
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.96 E-value=2.1e-28 Score=239.38 Aligned_cols=287 Identities=13% Similarity=0.093 Sum_probs=181.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCCCCCcccc-----------------CCC---------------
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVRS-----------------GVA--------------- 65 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~~gg~~~~-----------------~~~--------------- 65 (415)
.++|+|||||+||+++|..|++.+ . +|+|||+.+ +|+.+.+ +..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g--~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFG--ITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcC--CCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 578999999999999999999998 8 999999987 5553321 110
Q ss_pred -CCCcchHHHHHHHHHHhhccCeEEEeceEec--------eEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeec
Q 014990 66 -PDHPETKIVINQFSRVVQHERCSFFGNVTLG--------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSA 136 (415)
Q Consensus 66 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--------~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~ 136 (415)
..+....++..++.+.++..+++++.++.+. ..+...+....||+||+|||+. +. |.+|+ ..+.+.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~-~~-p~ip~---~~~~~~ 155 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDY-NF-PKKPF---KYGIHY 155 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCST-TS-BCCCS---SSCEEG
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCC-Cc-cCCCC---Cceech
Confidence 0011224555667777777889888876542 2343334446799999999983 33 45665 234444
Q ss_pred hhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCccc
Q 014990 137 REFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (415)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~ 216 (415)
..+... ...++++|+|||+|.+|+|+|..|.+ .+ .+|+++.|++.+.
T Consensus 156 ~~~~~~------------~~~~~~~vvVvG~G~~g~e~a~~l~~--------------------~g-~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 156 SEIEDF------------DNFNKGQYVVIGGNESGFDAAYQLAK--------------------NG-SDIALYTSTTGLN 202 (369)
T ss_dssp GGCSCG------------GGSCSSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECC-----
T ss_pred hhcCCh------------hhcCCCEEEEECCCcCHHHHHHHHHh--------------------cC-CeEEEEecCCCCC
Confidence 332210 01157899999999999999999986 33 5899999986432
Q ss_pred CCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCcee-EEEEecccccccc
Q 014990 217 AACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRE-LHFVFFRKPDSFL 295 (415)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-v~~~~~~~~~~v~ 295 (415)
.+..+ +. ....+....++.+.+. +.| |+++++..+.++.
T Consensus 203 ~~~~d------------------------~~---~~~~~~~~~~l~~~l~-------------~~g~v~~~~~~~v~~i~ 242 (369)
T 3d1c_A 203 DPDAD------------------------PS---VRLSPYTRQRLGNVIK-------------QGARIEMNVHYTVKDID 242 (369)
T ss_dssp -----------------------------CT---TSCCHHHHHHHHHHHH-------------TTCCEEEECSCCEEEEE
T ss_pred CCCCC------------------------CC---ccCCHHHHHHHHHHHh-------------hCCcEEEecCcEEEEEE
Confidence 10000 00 0001122222333332 555 9999998888885
Q ss_pred ccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCC
Q 014990 296 ESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGD 375 (415)
Q Consensus 296 ~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~ 375 (415)
. .++ ...+++. +|+. ...+|.||||+|++|+. ++....++. +++|++.+|+.+
T Consensus 243 --~-~~~-~~~v~~~----------------~g~~-~~~~d~vi~a~G~~~~~----~~~~~~~~~-~~~g~i~v~~~~- 295 (369)
T 3d1c_A 243 --F-NNG-QYHISFD----------------SGQS-VHTPHEPILATGFDATK----NPIVQQLFV-TTNQDIKLTTHD- 295 (369)
T ss_dssp --E-ETT-EEEEEES----------------SSCC-EEESSCCEECCCBCGGG----SHHHHHHSC-CTTSCCCBCTTS-
T ss_pred --e-cCC-ceEEEec----------------CCeE-eccCCceEEeeccCCcc----chhhhhhcc-CCCCCEEechhh-
Confidence 2 122 1123331 2332 34579999999999965 121222333 567889998865
Q ss_pred CCcccCCeeeeeccccCCc---cchhhhhhhHHHHHhhccc
Q 014990 376 SSQVENGLYVCGWLKRGPT---GIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 376 ~~t~~p~vfaiGD~~~~~~---~~~~~a~~~g~~~a~~i~~ 413 (415)
++|++|||||+|||+..+. ..+..+..||+.+|.+|..
T Consensus 296 ~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~ 336 (369)
T 3d1c_A 296 ESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQ 336 (369)
T ss_dssp BBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHH
T ss_pred cccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhc
Confidence 7899999999999985432 1233567889999998853
No 74
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.96 E-value=4.5e-30 Score=257.28 Aligned_cols=300 Identities=13% Similarity=0.099 Sum_probs=181.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc-ccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec--
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV-RSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG-- 96 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-- 96 (415)
++|||||||+||+++|.+|++.+++++|+|||+++++.-.. .+.+..+...++++..++.+++++.+++++.+....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 58999999999999999999998889999999988643211 111111222333333445566777899998886553
Q ss_pred ---eEEEecccc-cccCEEEEccCCCCCCCCCCCCCC--CCCee---echhhHHHhcCCCCCCCCCCCCCCCCeEEEEcC
Q 014990 97 ---SSVSLSELR-QLYHVVVLAYGAESDRALGIPGED--LIGVH---SAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQ 167 (415)
Q Consensus 97 ---~~v~~~~~~-~~~d~lvlAtG~~~~~~~~i~g~~--~~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~ 167 (415)
+.+++++++ ..||+||||||+ .+. +++||.+ ...+. ++.+....+.. +..++.++|+|+
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~-~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~----------~~~~~~~vv~gg 150 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGP-KLV-FGAEGQEENSTSICTAEHALETQKKLQE----------LYANPGPVVIGA 150 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCC-EEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHH----------HHHSCCCEEEEE
T ss_pred CCCCEEEECCCCEEECCEEEEeCCC-Ccc-CCccCcccCcCCcccHHHHHHHHHHHHh----------hccCCceEEEeC
Confidence 346666654 589999999999 443 4678754 11222 22222222221 112444566665
Q ss_pred ChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCc---ceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCC
Q 014990 168 GNVALDVARILLRPTEELATTDIASYAWTALEGSSI---RKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIK 244 (415)
Q Consensus 168 G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 244 (415)
+ .|++++..+.+ +...+.+.+++.+. -+++++...+.+. .+..
T Consensus 151 ~-~gve~~~~~~e---------~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~-~~~~----------------------- 196 (430)
T 3hyw_A 151 I-PGVSCFGPAYE---------FALMLHYELKKRGIRYKVPMTFITSEPYLG-HFGV----------------------- 196 (430)
T ss_dssp C-TTCCCCHHHHH---------HHHHHHHHHHHTTCGGGCCEEEECSSSSTT-CTTT-----------------------
T ss_pred C-CcEEEhHHHHH---------HHHHHHHHHHHhcccccceeeeecccchhh-hccc-----------------------
Confidence 4 35544443332 11222223333332 2466665543221 0000
Q ss_pred CCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCccee
Q 014990 245 SPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYA 324 (415)
Q Consensus 245 ~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~ 324 (415)
. . .+..++.+.+.+. ++||+++++..+.++. . + .+.+.+.
T Consensus 197 --~----~-~~~~~~~l~~~l~-------------~~GV~~~~~~~v~~v~--~--~----~~~~~~~------------ 236 (430)
T 3hyw_A 197 --G----G-IGASKRLVEDLFA-------------ERNIDWIANVAVKAIE--P--D----KVIYEDL------------ 236 (430)
T ss_dssp --T----C-STTHHHHHHHHHH-------------HTTCEEECSCEEEEEC--S--S----EEEEECT------------
T ss_pred --h----h-hHHHHHHHHHHHH-------------hCCeEEEeCceEEEEe--C--C----ceEEEee------------
Confidence 0 0 0111222223332 5689999999988885 2 2 3434321
Q ss_pred ccCCceEEEecCeeEEeeccCCccCCCCcccCCCC--ccccCCCceeeccCCCCCcccCCeeeeeccccCC---------
Q 014990 325 VGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKG--IVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGP--------- 393 (415)
Q Consensus 325 ~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g--~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~--------- 393 (415)
+|+++++++|+++|++|++|++ +....+ +..+.+|++.+|+++ +.+++|||||+|||+..+
T Consensus 237 --~g~~~~i~~d~vi~~~G~~~~~-----~~~~~~~~l~~~~~g~i~vd~~l-q~t~~~~IfAiGD~a~~p~~~~~~~~~ 308 (430)
T 3hyw_A 237 --NGNTHEVPAKFTMFMPSFQGPE-----VVASAGDKVANPANKMVIVNRCF-QNPTYKNIFGVGVVTAIPPIEKTPIPT 308 (430)
T ss_dssp --TSCEEEEECSEEEEECEEECCH-----HHHTTCTTTBCTTTCCBCCCTTS-BCSSSTTEEECSTTBCCCCSSCCSSCC
T ss_pred --CCCceEeecceEEEeccCCCch-----HHHhcccccccCCceEEEecccc-cCCCCCCEEEeccEEecCCcccCcCcC
Confidence 5667799999999999999965 222222 334556789999874 459999999999998532
Q ss_pred --ccchhhhhhhHHHHHhhccc
Q 014990 394 --TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 394 --~~~~~~a~~~g~~~a~~i~~ 413 (415)
......|+.||+.+|+||..
T Consensus 309 ~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 309 GVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHH
Confidence 23344699999999999974
No 75
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.96 E-value=5.5e-28 Score=251.99 Aligned_cols=293 Identities=14% Similarity=0.188 Sum_probs=184.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC-C-------CCCCcc-c------------------------cC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL-P-------TPFGLV-R------------------------SG 63 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~-~-------~~gg~~-~------------------------~~ 63 (415)
...++|+||||||||+++|.+|++.| .+|+|||+. + .+||.. . ++
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g--~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYG--AKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccEEEECCCccHHHHHHHHHhCC--CeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 46789999999999999999999999 999999973 2 245421 0 11
Q ss_pred CC-CC---CcchHHHHHHH-----------HHHhhccCeEEEeceEe---ceEEEe--ccc---ccccCEEEEccCCCCC
Q 014990 64 VA-PD---HPETKIVINQF-----------SRVVQHERCSFFGNVTL---GSSVSL--SEL---RQLYHVVVLAYGAESD 120 (415)
Q Consensus 64 ~~-~~---~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v---~~~v~~--~~~---~~~~d~lvlAtG~~~~ 120 (415)
.. +. .....++.+++ ...++..+++++.+... ...+.. .++ ...||+||||||+ .|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs-~p 261 (598)
T 2x8g_A 183 WSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGE-RP 261 (598)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCE-EE
T ss_pred ccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCC-CC
Confidence 10 10 11112222221 12244557887755432 112222 222 3579999999998 78
Q ss_pred CCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhc
Q 014990 121 RALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEG 200 (415)
Q Consensus 121 ~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~ 200 (415)
+.|++||.+. ...+..++. .. ...+++|+|||+|++|+|+|..|.+
T Consensus 262 ~~p~i~G~~~-~~~~~~~~~----~~---------~~~~~~vvViGgG~~g~E~A~~l~~-------------------- 307 (598)
T 2x8g_A 262 KYPEIPGAVE-YGITSDDLF----SL---------PYFPGKTLVIGASYVALECAGFLAS-------------------- 307 (598)
T ss_dssp CCCSSTTHHH-HCEEHHHHT----TC---------SSCCCSEEEECCSHHHHHHHHHHHH--------------------
T ss_pred CCCCCCCccc-ceEcHHHHh----hC---------ccCCCEEEEECCCHHHHHHHHHHHH--------------------
Confidence 8889998642 223333222 11 1146789999999999999999986
Q ss_pred CCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCc
Q 014990 201 SSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQ 280 (415)
Q Consensus 201 ~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 280 (415)
.+ .+|+++.|+ .+...+ ++++ ...+.+.+. +
T Consensus 308 ~g-~~Vtlv~~~-~~l~~~-d~~~---------------------------------~~~~~~~l~-------------~ 338 (598)
T 2x8g_A 308 LG-GDVTVMVRS-ILLRGF-DQQM---------------------------------AEKVGDYME-------------N 338 (598)
T ss_dssp TT-CCEEEEESS-CSSTTS-CHHH---------------------------------HHHHHHHHH-------------H
T ss_pred cC-CEEEEEECC-cCcCcC-CHHH---------------------------------HHHHHHHHH-------------h
Confidence 44 479999987 321111 1111 111222222 5
Q ss_pred eeEEEEeccccccccccCC-----CCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCccc
Q 014990 281 RELHFVFFRKPDSFLESNE-----RSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFD 355 (415)
Q Consensus 281 ~~v~~~~~~~~~~v~~~~~-----~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~ 355 (415)
.||+++++..+.++. .. .++....+.+... ..+|+..++++|.||+|+|++|+. ..+. .
T Consensus 339 ~gv~i~~~~~v~~v~--~~~~~~~~~~~~~~~~v~~~------------~~~g~~~~~~~D~vi~a~G~~p~~-~~l~-~ 402 (598)
T 2x8g_A 339 HGVKFAKLCVPDEIK--QLKVVDTENNKPGLLLVKGH------------YTDGKKFEEEFETVIFAVGREPQL-SKVL-C 402 (598)
T ss_dssp TTCEEEETEEEEEEE--EEECCBTTTTBCCEEEEEEE------------ETTSCEEEEEESEEEECSCEEECG-GGTB-C
T ss_pred CCCEEEECCeEEEEE--eccccccccCCCceEEEEEE------------eCCCcEEeccCCEEEEEeCCcccc-CccC-c
Confidence 589999887776663 10 0111112222110 013444456799999999999976 1111 2
Q ss_pred CCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 356 NHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 356 ~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
...|+.++++|++.+|+. ++|+.|||||+|||+.+.......|+.||+.+|.+|..
T Consensus 403 ~~~gl~~~~~G~i~vd~~--~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 403 ETVGVKLDKNGRVVCTDD--EQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp GGGCCCBCTTSCBCCCTT--SBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred hhcCceECCCCcEEeCCC--CcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhc
Confidence 455777888899999987 78999999999999655444566899999999999863
No 76
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.96 E-value=6.6e-29 Score=254.32 Aligned_cols=284 Identities=16% Similarity=0.159 Sum_probs=183.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC--------CCCCc-cccCCCCCCc--------------------
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP--------TPFGL-VRSGVAPDHP-------------------- 69 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~--------~~gg~-~~~~~~~~~~-------------------- 69 (415)
.|||+|||+||||+.+|.++++.| .+|+|||+.. .+||. +..|+.|.+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G--~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHG--ARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTT--CCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 379999999999999999999999 9999999743 25552 1122111100
Q ss_pred -------chHHH-------H----HHHHHHhhccCeEEEeceEe---ceEEEe--c-----ccccccCEEEEccCCCCCC
Q 014990 70 -------ETKIV-------I----NQFSRVVQHERCSFFGNVTL---GSSVSL--S-----ELRQLYHVVVLAYGAESDR 121 (415)
Q Consensus 70 -------~~~~~-------~----~~~~~~~~~~~~~~~~~~~v---~~~v~~--~-----~~~~~~d~lvlAtG~~~~~ 121 (415)
....+ . ......++..+++++.+... ...+.. . .....+|++|||||+ .|+
T Consensus 120 ~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs-~P~ 198 (542)
T 4b1b_A 120 KFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGC-RPH 198 (542)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCE-EEC
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCC-CCC
Confidence 01111 1 12233455667887766542 112221 1 123478999999999 677
Q ss_pred CCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcC
Q 014990 122 ALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS 201 (415)
Q Consensus 122 ~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~ 201 (415)
.|+.++.+...++++.+++. .. ..+++++|||+|++|+|+|..+.+ .
T Consensus 199 ~P~~~~~~~~~~~ts~~~l~----l~---------~lP~~lvIIGgG~IGlE~A~~~~~--------------------l 245 (542)
T 4b1b_A 199 IPDDVEGAKELSITSDDIFS----LK---------KDPGKTLVVGASYVALECSGFLNS--------------------L 245 (542)
T ss_dssp CCSSSBTHHHHCBCHHHHTT----CS---------SCCCSEEEECCSHHHHHHHHHHHH--------------------H
T ss_pred CCCcccCCCccccCchhhhc----cc---------cCCceEEEECCCHHHHHHHHHHHh--------------------c
Confidence 77654443334455554432 11 147899999999999999999986 4
Q ss_pred CcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCce
Q 014990 202 SIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQR 281 (415)
Q Consensus 202 ~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (415)
|. +||++.|+.. + |..+.++. ..+.+.+. +.
T Consensus 246 G~-~VTii~~~~~-L-----------------------------~~~D~ei~-----~~l~~~l~-------------~~ 276 (542)
T 4b1b_A 246 GY-DVTVAVRSIV-L-----------------------------RGFDQQCA-----VKVKLYME-------------EQ 276 (542)
T ss_dssp TC-CEEEEESSCS-S-----------------------------TTSCHHHH-----HHHHHHHH-------------HT
T ss_pred CC-eEEEeccccc-c-----------------------------cccchhHH-----HHHHHHHH-------------hh
Confidence 54 7999987643 2 22122221 11222222 66
Q ss_pred eEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCcc
Q 014990 282 ELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIV 361 (415)
Q Consensus 282 ~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~ 361 (415)
||.++++..+.++. . .++.+ .+.+. ++ .++++|.|++|+|.+||. ..+.+ +..++.
T Consensus 277 gi~~~~~~~v~~~~--~-~~~~~-~v~~~----------------~~--~~~~~D~vLvAvGR~Pnt-~~L~l-e~~gv~ 332 (542)
T 4b1b_A 277 GVMFKNGILPKKLT--K-MDDKI-LVEFS----------------DK--TSELYDTVLYAIGRKGDI-DGLNL-ESLNMN 332 (542)
T ss_dssp TCEEEETCCEEEEE--E-ETTEE-EEEET----------------TS--CEEEESEEEECSCEEESC-GGGCG-GGTTCC
T ss_pred cceeecceEEEEEE--e-cCCeE-EEEEc----------------CC--CeEEEEEEEEcccccCCc-cccCc-ccceee
Confidence 89999998888886 3 23322 22221 12 267899999999999976 33323 345677
Q ss_pred ccCCCce-eeccCCCCCcccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 362 PNIRGRV-LKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 362 ~~~~G~i-~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
++..+.+ .+|+. ++|+.|||||+|||+.+...+...|.+||+.++.+|..
T Consensus 333 ~~~~~~~i~vd~~--~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 333 VNKSNNKIIADHL--SCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFK 383 (542)
T ss_dssp EETTTTEECCCTT--SBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHS
T ss_pred ecccCceEecccc--ccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhc
Confidence 7766655 66665 89999999999999866555677899999999999864
No 77
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=6.2e-28 Score=255.33 Aligned_cols=274 Identities=16% Similarity=0.110 Sum_probs=197.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCCCcchHHHHHHHHHHhhcc-CeEEEece
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHE-RCSFFGNV 93 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 93 (415)
.+.+++|+|||||+||+++|..|++.| ++|+|||+++.+||.+.+ ...|++....++..++...+.+. +++++.++
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G--~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 465 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRG--YDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRES 465 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSC
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 456789999999999999999999999 999999999999987654 23466667777888888888887 89988876
Q ss_pred EeceEEEeccc-ccccCEEEEccCCCC-------CCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEE
Q 014990 94 TLGSSVSLSEL-RQLYHVVVLAYGAES-------DRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVIL 165 (415)
Q Consensus 94 ~v~~~v~~~~~-~~~~d~lvlAtG~~~-------~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VV 165 (415)
.+ +.++. ...||+||+|||+.. +..|++||.+...+++..+++.. ....+++|+||
T Consensus 466 ~v----~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~------------~~~~g~~VvVi 529 (690)
T 3k30_A 466 PM----TGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAG------------RLPDGKKVVVY 529 (690)
T ss_dssp CC----CHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTT------------CCCSSSEEEEE
T ss_pred ee----cHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCC------------CCCCCCEEEEE
Confidence 54 23333 358999999999931 45678899887778877665531 12367899999
Q ss_pred c--CChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccC
Q 014990 166 G--QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLI 243 (415)
Q Consensus 166 G--~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (415)
| +|.+|+|+|..|.+ .+ .+|+++.+.+.+.....
T Consensus 530 G~ggG~~g~e~A~~L~~--------------------~g-~~Vtlv~~~~~l~~~~~----------------------- 565 (690)
T 3k30_A 530 DDDHYYLGGVVAELLAQ--------------------KG-YEVSIVTPGAQVSSWTN----------------------- 565 (690)
T ss_dssp ECSCSSHHHHHHHHHHH--------------------TT-CEEEEEESSSSTTGGGG-----------------------
T ss_pred cCCCCccHHHHHHHHHh--------------------CC-CeeEEEecccccccccc-----------------------
Confidence 9 99999999999986 33 58999998864321000
Q ss_pred CCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcce
Q 014990 244 KSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQY 323 (415)
Q Consensus 244 ~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~ 323 (415)
.....+.+.+.+. +.||++++++.++++. . ++ +.+...
T Consensus 566 ----------~~~~~~~l~~~l~-------------~~GV~i~~~~~V~~i~--~--~~----~~v~~~----------- 603 (690)
T 3k30_A 566 ----------NTFEVNRIQRRLI-------------ENGVARVTDHAVVAVG--A--GG----VTVRDT----------- 603 (690)
T ss_dssp ----------GGTCHHHHHHHHH-------------HTTCEEEESEEEEEEE--T--TE----EEEEET-----------
T ss_pred ----------cchhHHHHHHHHH-------------HCCCEEEcCcEEEEEE--C--Ce----EEEEEc-----------
Confidence 0111122223332 5689999999998886 3 32 333221
Q ss_pred eccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhhhhh
Q 014990 324 AVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYC 403 (415)
Q Consensus 324 ~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a~~~ 403 (415)
.+++++++++|.||+|+|++|+. .+... +...+. +|+.|+||++|||+. +..+. .|+.|
T Consensus 604 --~~~~~~~i~aD~VV~A~G~~p~~----~l~~~----l~~~~~---------~t~~~~VyaiGD~~~-~~~~~-~A~~~ 662 (690)
T 3k30_A 604 --YASIERELECDAVVMVTARLPRE----ELYLD----LVARRD---------AGEIASVRGIGDAWA-PGTIA-AAVWS 662 (690)
T ss_dssp --TTCCEEEEECSEEEEESCEEECC----HHHHH----HHHHHH---------HTSCSEEEECGGGTS-CBCHH-HHHHH
T ss_pred --cCCeEEEEECCEEEECCCCCCCh----HHHHH----Hhhhhc---------ccCCCCEEEEeCCCc-hhhHH-HHHHH
Confidence 14556689999999999999965 22211 111111 468999999999985 44444 69999
Q ss_pred HHHHHhhcccc
Q 014990 404 AEETVSSLSLI 414 (415)
Q Consensus 404 g~~~a~~i~~~ 414 (415)
|+.+|.+|...
T Consensus 663 g~~aa~~i~~~ 673 (690)
T 3k30_A 663 GRRAAEEFDAV 673 (690)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHHhh
Confidence 99999999764
No 78
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=2.6e-28 Score=259.36 Aligned_cols=289 Identities=16% Similarity=0.102 Sum_probs=191.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCCCcchHHHHHHHHHHhhcc------CeE
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHE------RCS 88 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~ 88 (415)
.++.++|+||||||||+++|..|++.+ ++|+|||+.+.+||.+.+ ...|+........+.+...++.. ++.
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G--~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~ 463 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESG--YTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQL 463 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceE
Confidence 456789999999999999999999999 999999999999988765 23355544444444443333322 455
Q ss_pred EEeceEeceEEEeccc-ccccCEEEEccCCCC-------CCCCCCCCCC--CCCeeechhhHHHhcCCCCCCCCCCCCCC
Q 014990 89 FFGNVTLGSSVSLSEL-RQLYHVVVLAYGAES-------DRALGIPGED--LIGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (415)
Q Consensus 89 ~~~~~~v~~~v~~~~~-~~~~d~lvlAtG~~~-------~~~~~i~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (415)
+..+.. ++.++. ...||+||+|||+.. |+.|++||.+ .+++++..+++. .. ...
T Consensus 464 i~~~~~----v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~---~~---------~~~ 527 (729)
T 1o94_A 464 ALGQKP----MTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD---GK---------KKI 527 (729)
T ss_dssp ECSCCC----CCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH---CC---------SCC
T ss_pred EEeCeE----EehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc---CC---------CCC
Confidence 544432 334443 357999999999941 5677899987 678888776653 11 226
Q ss_pred CCeEEEEc--CChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEE
Q 014990 159 TDTAVILG--QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (415)
Q Consensus 159 ~k~V~VVG--~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (415)
+++|+||| +|.+|+|+|..|.+ .+ .+|+++.|++ +.. ...
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~--------------------~G-~~Vtlv~~~~-l~~---~~~------------- 569 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLAT--------------------AG-HEVTIVSGVH-LAN---YMH------------- 569 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHH--------------------TT-CEEEEEESSC-TTH---HHH-------------
T ss_pred CCeEEEEcCCCCchHHHHHHHHHH--------------------cC-CEEEEEeccc-ccc---ccc-------------
Confidence 89999999 99999999999986 44 4899999886 310 000
Q ss_pred EcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeec-
Q 014990 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALK- 315 (415)
Q Consensus 237 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~- 315 (415)
++. . .+.+.+.+. ++||+++++..+.++. . + .+++......
T Consensus 570 --------~~~--------~-~~~~~~~l~-------------~~GV~i~~~~~v~~i~--~--~----~v~~~~~~~~~ 611 (729)
T 1o94_A 570 --------FTL--------E-YPNMMRRLH-------------ELHVEELGDHFCSRIE--P--G----RMEIYNIWGDG 611 (729)
T ss_dssp --------HTT--------C-HHHHHHHHH-------------HTTCEEECSEEEEEEE--T--T----EEEEEETTCSC
T ss_pred --------ccc--------c-HHHHHHHHH-------------hCCCEEEcCcEEEEEE--C--C----eEEEEEecCCc
Confidence 000 0 111222222 5689999999999986 3 3 2322211000
Q ss_pred ----CCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeecccc
Q 014990 316 ----GGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKR 391 (415)
Q Consensus 316 ----~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~ 391 (415)
.++++.......++..+++||.||+|+|++|+. .+....+ ..+|++ ++|++|+|||+|||+.
T Consensus 612 ~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~----~l~~~l~--------~~vd~~--~~t~~~~VyAiGD~~~ 677 (729)
T 1o94_A 612 SKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC----TLWNELK--------ARESEW--AENDIKGIYLIGDAEA 677 (729)
T ss_dssp SCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC----HHHHHHH--------HTGGGT--GGGTCCEEEECGGGTS
T ss_pred eEEecccccccccccCCcceeeeCCEEEECCCCCCCh----HHHHHHh--------hhcccc--cccCCCCeEEEeCccc
Confidence 001111111124555679999999999999975 2222111 124554 7899999999999985
Q ss_pred CCccchhhhhhhHHHHHhhcccc
Q 014990 392 GPTGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 392 ~~~~~~~~a~~~g~~~a~~i~~~ 414 (415)
+..+. .|+.||+.||.+|.+.
T Consensus 678 -~~~~~-~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 678 -PRLIA-DATFTGHRVAREIEEA 698 (729)
T ss_dssp -CCCHH-HHHHHHHHHHHTTTSS
T ss_pred -hhhHH-HHHHHHHHHHHHhhhh
Confidence 44444 7999999999999764
No 79
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.95 E-value=1.8e-28 Score=246.23 Aligned_cols=299 Identities=15% Similarity=0.112 Sum_probs=190.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHH---cCCCceEEEEcCCCCCCCccc-cCCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPTPFGLVR-SGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~---~g~~~~v~lie~~~~~gg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
.++|||||||+||+++|..|++ .+ .+|+|||+.+....... .....+.....++...+.+.++..+++++.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g--~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v 81 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSG--HEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSA 81 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGG--SEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCc--CEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEE
Confidence 5799999999999999999999 66 99999999886422111 011112333445555566777778899886644
Q ss_pred ec-----eEEEecccc-cccCEEEEccCCCCCCCCCCCCCCCC--Ceeechhh------HHHhcCCCCCCCCCCCCCCCC
Q 014990 95 LG-----SSVSLSELR-QLYHVVVLAYGAESDRALGIPGEDLI--GVHSAREF------VWWYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 95 v~-----~~v~~~~~~-~~~d~lvlAtG~~~~~~~~i~g~~~~--~v~~~~~~------~~~~~~~~~~~~~~~~~~~~k 160 (415)
.. ..++++++. ..||+||+|||+ .++.|++||.+.. ..++...+ ...+.. ...++
T Consensus 82 ~~id~~~~~V~~~~g~~i~~d~lviAtG~-~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~~~~ 150 (437)
T 3sx6_A 82 EQIDAEAQNITLADGNTVHYDYLMIATGP-KLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQA----------LLREP 150 (437)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCC-EECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHH----------HHHSC
T ss_pred EEEEcCCCEEEECCCCEEECCEEEECCCC-CcCcccCCCCCcccCcceecccccHHHHHHHHHHH----------HHhCC
Confidence 32 235555554 589999999999 7777889997632 22221111 111110 00245
Q ss_pred eEEEEcCChhH------HHHHHHHhcCcccccccCchhHHHHHhhcCCcc---e-EEEEeecCcccCCCCHHHHHHHHcC
Q 014990 161 TAVILGQGNVA------LDVARILLRPTEELATTDIASYAWTALEGSSIR---K-VYLVGRRGPVQAACTAKELREILGI 230 (415)
Q Consensus 161 ~V~VVG~G~sg------~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~-v~l~~r~~~~~~~~~~~~l~~~~~~ 230 (415)
+++|||+|+++ +|+|..+.. .+++.+.+ + |+++.+.+.+.. +.
T Consensus 151 ~~vVVGgG~~~g~~G~~~E~a~~la~----------------~l~~~g~~~~~~~Vtlv~~~~~~~~-~~---------- 203 (437)
T 3sx6_A 151 GPIVIGAMAGASCFGPAYEYAMIVAS----------------DLKKRGMRDKIPSFTFITSEPYIGH-LG---------- 203 (437)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHH----------------HHHHTTCGGGCSCEEEEESSSSTTC-TT----------
T ss_pred CEEEEEcCCCCCcCcHHHHHHHHHHH----------------HHHHcCCcccCcEEEEEcCCccccc-cc----------
Confidence 67899987654 998876653 12233432 2 999998864311 00
Q ss_pred CCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEe
Q 014990 231 KNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFE 310 (415)
Q Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~ 310 (415)
++... ..+..+.+.+. +.||+++++..+.++. . + .+.+.
T Consensus 204 --------------l~~~~------~~~~~~~~~l~-------------~~gI~~~~~~~v~~v~--~--~----~v~~~ 242 (437)
T 3sx6_A 204 --------------IQGVG------DSKGILTKGLK-------------EEGIEAYTNCKVTKVE--D--N----KMYVT 242 (437)
T ss_dssp --------------TTCCT------THHHHHHHHHH-------------HTTCEEECSEEEEEEE--T--T----EEEEE
T ss_pred --------------cCcch------HHHHHHHHHHH-------------HCCCEEEcCCEEEEEE--C--C----eEEEE
Confidence 01000 01122223332 5689999999998886 3 3 34443
Q ss_pred eeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCc-ccCCeeeeecc
Q 014990 311 KTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQ-VENGLYVCGWL 389 (415)
Q Consensus 311 ~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t-~~p~vfaiGD~ 389 (415)
... .+|. .++++++++|++++++|++++. ++....++ .+++|++.+|++ +++ ++|||||+|||
T Consensus 243 ~~~----~~g~-----~~~~~~i~~D~vv~~~g~~~~~----~~~~~~gl-~~~~G~i~Vd~~--l~t~~~~~Ifa~GD~ 306 (437)
T 3sx6_A 243 QVD----EKGE-----TIKEMVLPVKFGMMIPAFKGVP----AVAGVEGL-CNPGGFVLVDEH--QRSKKYANIFAAGIA 306 (437)
T ss_dssp EEC----TTSC-----EEEEEEEECSEEEEECCEECCH----HHHTSTTT-BCTTSCBCBCTT--SBBSSCTTEEECGGG
T ss_pred ecc----cCCc-----cccceEEEEeEEEEcCCCcCch----hhhccccc-cCCCCcEEeChh--ccCCCCCCEEEEEEE
Confidence 321 0111 1235689999999999999854 23333455 577899999996 666 99999999999
Q ss_pred ccCC-----------ccchhhhhhhHHHHHhhcccc
Q 014990 390 KRGP-----------TGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 390 ~~~~-----------~~~~~~a~~~g~~~a~~i~~~ 414 (415)
+..+ ......|+.||+.+|.||...
T Consensus 307 ~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~ 342 (437)
T 3sx6_A 307 IAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKAD 342 (437)
T ss_dssp BCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 8632 234557999999999999753
No 80
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=8e-28 Score=262.38 Aligned_cols=280 Identities=15% Similarity=0.162 Sum_probs=197.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccC---CCCCCcchHHHHHHHHHHhhcc-CeEEEeceE
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG---VAPDHPETKIVINQFSRVVQHE-RCSFFGNVT 94 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 94 (415)
.++||||||||||++||..|++.+ .+|+|||+++.+||.+.+. ..+. ....+....+.+.+... +++++.++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G--~~V~lie~~~~~GG~~~~~~k~~i~~-~~~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSG--ARVMLLDERAEAGGTLLDTAGEQIDG-MDSSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSSGGGGGSSCCEETT-EEHHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CcEEEEeCCCCCCceeccCCccccCC-CCHHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 578999999999999999999999 9999999999998877631 1121 12334444555555553 788887765
Q ss_pred eceE--------E-------Ee--------cc-cccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCC
Q 014990 95 LGSS--------V-------SL--------SE-LRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGK 150 (415)
Q Consensus 95 v~~~--------v-------~~--------~~-~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~ 150 (415)
+... + .. .. ....||+||||||+ .|++|++||++.++++++..+...++...
T Consensus 205 V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs-~p~~~~ipG~~~~gv~~~~~~~~~l~~~~--- 280 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGA-HERPIVFENNDRPGIMLAGAVRSYLNRYG--- 280 (965)
T ss_dssp EEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE-EECCCCCBTCCSTTEEEHHHHHHHHHTTC---
T ss_pred EEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCC-ccCCCCCCCCCCCCEEEhHHHHHHHHhcC---
Confidence 4210 0 00 11 13479999999999 68888999999899998766544443221
Q ss_pred CCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcC
Q 014990 151 NLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGI 230 (415)
Q Consensus 151 ~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~ 230 (415)
..++++|+|||+|++|+|+|..|.+ .+. +|+++.+++.+.
T Consensus 281 -----~~~gk~vvViGgG~~g~E~A~~L~~--------------------~G~-~Vtvv~~~~~~~-------------- 320 (965)
T 2gag_A 281 -----VRAGARIAVATTNDSAYELVRELAA--------------------TGG-VVAVIDARSSIS-------------- 320 (965)
T ss_dssp -----EESCSSEEEEESSTTHHHHHHHHGG--------------------GTC-CSEEEESCSSCC--------------
T ss_pred -----CCCCCeEEEEcCCHHHHHHHHHHHH--------------------cCC-cEEEEECCCccc--------------
Confidence 1257999999999999999999986 455 499999886431
Q ss_pred CCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCC-CCCeeeEEE
Q 014990 231 KNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNER-SGHVSGVHF 309 (415)
Q Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~-~~~v~~v~~ 309 (415)
+ . .+.+. +.||+++++..+.++. . + ++.+.++++
T Consensus 321 ---------------~---------~-----~~~l~-------------~~GV~v~~~~~v~~i~--~-~~~~~v~~v~~ 355 (965)
T 2gag_A 321 ---------------A---------A-----AAQAV-------------ADGVQVISGSVVVDTE--A-DENGELSAIVV 355 (965)
T ss_dssp ---------------H---------H-----HHHHH-------------HTTCCEEETEEEEEEE--E-CTTSCEEEEEE
T ss_pred ---------------h---------h-----HHHHH-------------hCCeEEEeCCEeEEEe--c-cCCCCEEEEEE
Confidence 0 0 11121 5689999999999987 3 2 566767776
Q ss_pred eeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCC-----cccCCee
Q 014990 310 EKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSS-----QVENGLY 384 (415)
Q Consensus 310 ~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~-----t~~p~vf 384 (415)
.+.. ..+ ..|+.++++||.|++++|++|+. .+.. ...|.+.+|+. ++ |+.||||
T Consensus 356 ~~~~----~~~-----~~G~~~~i~~D~Vv~a~G~~P~~----~l~~------~~~g~i~vd~~--~~~~v~~ts~p~Iy 414 (965)
T 2gag_A 356 AELD----EAR-----ELGGTQRFEADVLAVAGGFNPVV----HLHS------QRQGKLDWDTT--IHAFVPADAVANQH 414 (965)
T ss_dssp EEEC----TTC-----CEEEEEEEECSEEEEECCEEECC----HHHH------HTTCCEEEETT--TTEEEECSCCTTEE
T ss_pred Eecc----ccC-----CCCceEEEEcCEEEECCCcCcCh----HHHH------hCCCcEEEcCc--ccccccCCCCCCEE
Confidence 5410 000 01334689999999999999965 2221 22467778775 33 8999999
Q ss_pred eeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 385 VCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 385 aiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
|+|||+.. .++. .|+.||+.||.+|..
T Consensus 415 AaGD~a~~-~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 415 LAGAMTGR-LDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp ECGGGGTC-CSHH-HHHHHHHHHHHHHHH
T ss_pred EEEecCCc-hhHH-HHHHHHHHHHHHHHH
Confidence 99999854 3444 799999999999864
No 81
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.95 E-value=4.4e-28 Score=240.45 Aligned_cols=293 Identities=14% Similarity=0.056 Sum_probs=176.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-cCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
.|+|||||||+||+++|.+|++.+++.+|+|||+++..+.... +.+..+.....++...+..+. ..+++++.+..+..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-~~gv~~i~~~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-AHGIQVVHDSALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-HTTCEEECSCEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-HCCCEEEEeEEEEE
Confidence 5789999999999999999999987889999999876432211 001011112222222223333 35899988766532
Q ss_pred -----EEEeccc-ccccCEEEEccCCCCCCCCCCCCCCCC----Cee--echhh----HHHhcCCCCCCCCCCCCCCCCe
Q 014990 98 -----SVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLI----GVH--SAREF----VWWYNGHPDGKNLSPDLKSTDT 161 (415)
Q Consensus 98 -----~v~~~~~-~~~~d~lvlAtG~~~~~~~~i~g~~~~----~v~--~~~~~----~~~~~~~~~~~~~~~~~~~~k~ 161 (415)
.+...++ +..||+||+|||+ .+..+++||.+.. .++ ...+. ...+.. + ....
T Consensus 81 d~~~~~v~~~~g~~i~yd~LviAtG~-~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~----------~-~~~~ 148 (401)
T 3vrd_B 81 DPDKKLVKTAGGAEFAYDRCVVAPGI-DLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES----------M-DDGG 148 (401)
T ss_dssp ETTTTEEEETTSCEEECSEEEECCCE-EECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH----------S-CTTC
T ss_pred EccCcEEEecccceeecceeeeccCC-ccccCCccCchhhcccCccceeccHHHHHHHHHHHHh----------c-ccCC
Confidence 3455554 3589999999999 6777788886521 111 11111 111111 1 2333
Q ss_pred EEEEcCCh-------hHHHHHHHHhcCcccccccCchhHHHHHhhcCC-cceEEEEeecCcccCCCCHHHHHHHHcCCCe
Q 014990 162 AVILGQGN-------VALDVARILLRPTEELATTDIASYAWTALEGSS-IRKVYLVGRRGPVQAACTAKELREILGIKNL 233 (415)
Q Consensus 162 V~VVG~G~-------sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~ 233 (415)
.+|+++|. .+.|++.++.. .++..+ ..+|+++.+.+.+. ....+
T Consensus 149 ~~v~~~~~~~i~~~~a~~e~~~~~a~----------------~~~~~~~~~~v~i~~~~~~~~---~~~~~--------- 200 (401)
T 3vrd_B 149 VVIIAPPAPPFRCPPGPYERASQIAH----------------YLKAHKSKSKVIILDNSQTFS---KQAQF--------- 200 (401)
T ss_dssp EEEEECCSSSCBCTTHHHHHHHHHHH----------------HHHHHCTTCEEEEECSSSSCT---THHHH---------
T ss_pred cEEEecCCccEEeehHHHHHHHHHHH----------------HHHhcCCCCEEEEEccccccc---ccccc---------
Confidence 44444333 34444444431 111122 24788887765321 00000
Q ss_pred eEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeee
Q 014990 234 YVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTA 313 (415)
Q Consensus 234 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~ 313 (415)
.+.+.... ...+...+|+++++..+..+. . ++....+++
T Consensus 201 ----------------------------~~~~~~~~-----~~~l~~~gi~v~~~~~v~~v~--~--~~~~~~v~~---- 239 (401)
T 3vrd_B 201 ----------------------------TKGWERLY-----GFGTENALIEWHPGPDAAVVK--T--DTEAMTVET---- 239 (401)
T ss_dssp ----------------------------HHHHHHHS-----CTTSTTCSEEEECTTTTCEEE--E--ETTTTEEEE----
T ss_pred ----------------------------cHHHHHHH-----HHHHHhcCcEEEeCceEEEEE--e--cccceEEEc----
Confidence 01111110 223347889999988877775 2 222222322
Q ss_pred ecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccC-
Q 014990 314 LKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRG- 392 (415)
Q Consensus 314 ~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~- 392 (415)
.+++++++|+++|++|.+|+. +....++ .+++|++.||+++.+++++|||||+|||+.+
T Consensus 240 --------------~~g~~i~~D~vi~~~g~~~~~-----~~~~~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~ 299 (401)
T 3vrd_B 240 --------------SFGETFKAAVINLIPPQRAGK-----IAQSASL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNAA 299 (401)
T ss_dssp --------------TTSCEEECSEEEECCCEEECH-----HHHHTTC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCT
T ss_pred --------------CCCcEEEeeEEEEecCcCCch-----hHhhccc-cccCCCEEECCCcceecCCCCEEEecccccCC
Confidence 223479999999999999864 4445565 4778999999875356899999999999753
Q ss_pred C-ccchhhhhhhHHHHHhhccc
Q 014990 393 P-TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 393 ~-~~~~~~a~~~g~~~a~~i~~ 413 (415)
+ +.....|+.||+.+|+||..
T Consensus 300 ~~pk~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 300 PMPKSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp TSCBSHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHH
Confidence 2 34556799999999999974
No 82
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.95 E-value=4.3e-26 Score=229.46 Aligned_cols=267 Identities=17% Similarity=0.142 Sum_probs=177.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc--eEEEEcCCCCCCCccccCCCC-----------------------------
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRLPTPFGLVRSGVAP----------------------------- 66 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~--~v~lie~~~~~gg~~~~~~~~----------------------------- 66 (415)
..++|+|||||+||+++|..|++.+ . +|+|||+.+.+||.+.+...+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G--~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEK--AFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--CCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--CCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 4689999999999999999999999 7 999999998888766543100
Q ss_pred ---------------------------CCcchHHHHHHHHHHhhccCeEEEeceEece--------EEEecc---c----
Q 014990 67 ---------------------------DHPETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSLSE---L---- 104 (415)
Q Consensus 67 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--------~v~~~~---~---- 104 (415)
.+....++.+++.+.++..+..++.++.|.. .++..+ +
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0111235556667776665556666665521 344433 2
Q ss_pred ccccCEEEEccCCC-CCCCCCCCCCCC-----C-CeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHH
Q 014990 105 RQLYHVVVLAYGAE-SDRALGIPGEDL-----I-GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARI 177 (415)
Q Consensus 105 ~~~~d~lvlAtG~~-~~~~~~i~g~~~-----~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~ 177 (415)
...||+||+|||+. .|+.|++||.+. + .+.++.++.... ...+++|+|||+|++|+|+|.+
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~------------~~~~k~VvVvG~G~sg~e~A~~ 230 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPE------------LFVGESVLVVGGASSANDLVRH 230 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGG------------GGTTCCEEEECSSHHHHHHHHH
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChh------------hcCCCEEEEEccCcCHHHHHHH
Confidence 35799999999983 477888888651 2 356655443211 1158999999999999999999
Q ss_pred HhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHH
Q 014990 178 LLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRI 257 (415)
Q Consensus 178 L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 257 (415)
|.+ .+.+.|+++.|++.+ +
T Consensus 231 l~~--------------------~~~~~V~l~~r~~~~------------------------------------l----- 249 (447)
T 2gv8_A 231 LTP--------------------VAKHPIYQSLLGGGD------------------------------------I----- 249 (447)
T ss_dssp HTT--------------------TSCSSEEEECTTCCS------------------------------------C-----
T ss_pred HHH--------------------HhCCcEEEEeCCCCc------------------------------------C-----
Confidence 996 343339999987532 0
Q ss_pred HHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCe
Q 014990 258 QRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGM 337 (415)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~ 337 (415)
...+|.. ...+.++. . ++. .|++. +|+ .++++|.
T Consensus 250 ---------------------~~~~i~~--~~~v~~~~--~--~~~--~v~~~----------------dG~-~~~~~D~ 283 (447)
T 2gv8_A 250 ---------------------QNESLQQ--VPEITKFD--P--TTR--EIYLK----------------GGK-VLSNIDR 283 (447)
T ss_dssp ---------------------BCSSEEE--ECCEEEEE--T--TTT--EEEET----------------TTE-EECCCSE
T ss_pred ---------------------CCCCeEE--ecCeEEEe--c--CCC--EEEEC----------------CCC-EeccCCE
Confidence 0334543 34555664 2 221 34442 333 2479999
Q ss_pred eEEeeccCCccCCCCcc-----cCCC--CccccCCCceeeccCC-CCCcccCCeeeeeccccCCccchhhhhhhHHHHHh
Q 014990 338 VLKSIGYKSVPVNGLPF-----DNHK--GIVPNIRGRVLKNISG-DSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVS 409 (415)
Q Consensus 338 vi~atG~~p~~~~~~~~-----~~~~--g~~~~~~G~i~v~~~~-~~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~ 409 (415)
||+|||++|+. +| .... ++.. ++...++.+. .+.++.|+||++||+.... ....|..||+++|.
T Consensus 284 vi~atG~~~~~----~~l~~~~l~~~~~~i~~--~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~--~~~~a~~qa~~~a~ 355 (447)
T 2gv8_A 284 VIYCTGYLYSV----PFPSLAKLKSPETKLID--DGSHVHNVYQHIFYIPDPTLAFVGLALHVV--PFPTSQAQAAFLAR 355 (447)
T ss_dssp EEECCCBCCCC----CCHHHHSCCSTTTCCCS--SSSSCCSEETTTEETTCTTEEESSCCBSSC--HHHHHHHHHHHHHH
T ss_pred EEECCCCCcCC----CCCcccccccccCceec--CCCcccccccccccCCCCcEEEEecccccc--CchHHHHHHHHHHH
Confidence 99999999964 34 3332 3333 3444443321 0237899999999997543 45578999999999
Q ss_pred hccc
Q 014990 410 SLSL 413 (415)
Q Consensus 410 ~i~~ 413 (415)
+|..
T Consensus 356 ~~~g 359 (447)
T 2gv8_A 356 VWSG 359 (447)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 8864
No 83
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=1.6e-26 Score=243.79 Aligned_cols=282 Identities=17% Similarity=0.175 Sum_probs=186.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
.+..++|+|||||+||+++|..|++.+ ++|+|||+++.+||.+.+ ...|......+....+...++..+++++.++.
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 447 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARG--HQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHT 447 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcE
Confidence 345789999999999999999999998 999999999988887653 23465555566667777778888999988876
Q ss_pred eceEEEeccccc-ccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHH
Q 014990 95 LGSSVSLSELRQ-LYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALD 173 (415)
Q Consensus 95 v~~~v~~~~~~~-~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e 173 (415)
+.. ... .||+||||||+ .|+.|++||.+.+++++..+++. .. ...+++|+|||+|.+|+|
T Consensus 448 v~~------~~~~~~d~lviAtG~-~p~~~~i~G~~~~~v~~~~~~l~---~~---------~~~~~~VvVIGgG~~g~E 508 (671)
T 1ps9_A 448 VTA------DQLQAFDETILASGI-VPRTPPIDGIDHPKVLSYLDVLR---DK---------APVGNKVAIIGCGGIGFD 508 (671)
T ss_dssp CCS------SSSCCSSEEEECCCE-EECCCCCBTTTSTTEEEHHHHHT---SC---------CCCCSEEEEECCHHHHHH
T ss_pred ecH------HHhhcCCEEEEccCC-CcCCCCCCCCCCCcEeeHHHHhh---CC---------CCCCCeEEEECCChhHHH
Confidence 531 123 89999999999 78888999988777887655442 11 226899999999999999
Q ss_pred HHHHHhcCcccccccCchhHHHHHhh------------------cCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeE
Q 014990 174 VARILLRPTEELATTDIASYAWTALE------------------GSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYV 235 (415)
Q Consensus 174 ~a~~L~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~ 235 (415)
+|..|.+...+.. ..+..+. ..|. .....+|+++.+.+...
T Consensus 509 ~A~~l~~~G~~vt-v~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l------------------- 567 (671)
T 1ps9_A 509 TAMYLSQPGESTS-QNIAGFC-NEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKP------------------- 567 (671)
T ss_dssp HHHHHTCCSSCGG-GCHHHHH-HHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCT-------------------
T ss_pred HHHHHHhcCCCcc-cchhhhh-hhhcccccccccccccccccccCCCCcEEEEEEecchhh-------------------
Confidence 9999986221100 0000000 0000 00113455555543211
Q ss_pred EEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeec
Q 014990 236 HIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALK 315 (415)
Q Consensus 236 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~ 315 (415)
.. .+ .+..++...+.+. +.||+++++..+.++. . + ++.+..
T Consensus 568 ----------~~---~l-~~~~~~~~~~~l~-------------~~GV~v~~~~~v~~i~--~--~----~v~~~~---- 608 (671)
T 1ps9_A 568 ----------GQ---GL-GKTTGWIHRTTLL-------------SRGVKMIPGVSYQKID--D--D----GLHVVI---- 608 (671)
T ss_dssp ----------TT---TS-CTTTHHHHHHHHH-------------HTTCEEECSCEEEEEE--T--T----EEEEEE----
T ss_pred ----------cc---cc-ccccHHHHHHHHH-------------hcCCEEEeCcEEEEEe--C--C----eEEEec----
Confidence 00 00 0111122223332 5689999998888885 2 3 233321
Q ss_pred CCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCcc
Q 014990 316 GGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTG 395 (415)
Q Consensus 316 ~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~ 395 (415)
+|+.+++++|.||||+|++|+. .+... + ....++||++|||......
T Consensus 609 -----------~G~~~~i~~D~Vi~a~G~~p~~----~l~~~----l--------------~~~g~~v~aiGD~~~~~~~ 655 (671)
T 1ps9_A 609 -----------NGETQVLAVDNVVICAGQEPNR----ALAQP----L--------------IDSGKTVHLIGGCDVAMEL 655 (671)
T ss_dssp -----------TTEEEEECCSEEEECCCEEECC----TTHHH----H--------------HTTTCCEEECGGGTCCSSC
T ss_pred -----------CCeEEEEeCCEEEECCCccccH----HHHHH----H--------------HhcCCCEEEECCcCccCch
Confidence 4555689999999999999965 22110 0 1123789999999854432
Q ss_pred chhhhhhhHHHHHhhc
Q 014990 396 IIATNLYCAEETVSSL 411 (415)
Q Consensus 396 ~~~~a~~~g~~~a~~i 411 (415)
....|+.||..+|.+|
T Consensus 656 ~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 656 DARRAIAQGTRLALEI 671 (671)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhC
Confidence 3447999999999986
No 84
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.94 E-value=4.3e-27 Score=233.98 Aligned_cols=282 Identities=13% Similarity=0.113 Sum_probs=181.5
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCCceEEEEcCCCCCCCcccc-CCCCCCcchHHHHHHHHHHhhccCeEEEeceEe
Q 014990 20 LRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~---~g~~~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
++|+|||||+||+++|..|++ .+ .+|+|||+++.++..... ....+.....++...+.+.+++.+++++.+..+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g--~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~ 79 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSK--ADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVE 79 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGG--SEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCC--CeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEE
Confidence 689999999999999999999 66 999999999864322111 111222233334445566677778998877443
Q ss_pred c-----eEEEecccc-----cccCEEEEccCCCCCCCCCCCCCCCC--Ceeec---hhhHHHhcCCCCCCCCCCCCCCCC
Q 014990 96 G-----SSVSLSELR-----QLYHVVVLAYGAESDRALGIPGEDLI--GVHSA---REFVWWYNGHPDGKNLSPDLKSTD 160 (415)
Q Consensus 96 ~-----~~v~~~~~~-----~~~d~lvlAtG~~~~~~~~i~g~~~~--~v~~~---~~~~~~~~~~~~~~~~~~~~~~~k 160 (415)
. ..+++.+.. ..||+||+|||+ .+..|++||.+.. .+.+. ..+...+.. ..+
T Consensus 80 ~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~-~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~------------~~~ 146 (409)
T 3h8l_A 80 KIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGA-HLATELVKGWDKYGYSVCEPEFATKLREKLES------------FQG 146 (409)
T ss_dssp EEETTTTEEEEECTTSCEEEEECSEEEECCCC-EECGGGSBTHHHHCEESSSTTHHHHHHHHHHH------------CCS
T ss_pred EEeCCCCEEEEccCCcccceeeCCEEEECCCC-CcCccCCCChhhcCcCcCCHHHHHHHHHHHHH------------hcC
Confidence 2 134444333 579999999999 7777788886521 11111 111111111 125
Q ss_pred eEEEEcCCh-------------------------hHHHHHHHHhcCcccccccCchhHHHHHhhcCCc---ceEEEEeec
Q 014990 161 TAVILGQGN-------------------------VALDVARILLRPTEELATTDIASYAWTALEGSSI---RKVYLVGRR 212 (415)
Q Consensus 161 ~V~VVG~G~-------------------------sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~l~~r~ 212 (415)
+++|||+|. .++|+|..+.. .+++.+. .+|+++.+.
T Consensus 147 ~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~----------------~l~~~g~~~~~~v~~~~~~ 210 (409)
T 3h8l_A 147 GNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHG----------------YFKKKGMLDKVHVTVFSPG 210 (409)
T ss_dssp EEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHH----------------HHHTTTCTTTEEEEEECSS
T ss_pred CeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHH----------------HHHHcCCCCCeEEEEEeCC
Confidence 677999992 47888876653 2223342 478998887
Q ss_pred CcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccc
Q 014990 213 GPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPD 292 (415)
Q Consensus 213 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (415)
+ ....+. +.....+.+.+. +.||+++++..+.
T Consensus 211 ~-~l~~~~----------------------------------~~~~~~~~~~l~-------------~~gV~~~~~~~v~ 242 (409)
T 3h8l_A 211 E-YLSDLS----------------------------------PNSRKAVASIYN-------------QLGIKLVHNFKIK 242 (409)
T ss_dssp S-SSTTBC----------------------------------HHHHHHHHHHHH-------------HHTCEEECSCCEE
T ss_pred c-cccccC----------------------------------HHHHHHHHHHHH-------------HCCCEEEcCCceE
Confidence 6 211111 111122223332 5589999999888
Q ss_pred cccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCC--CccccCCCceee
Q 014990 293 SFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHK--GIVPNIRGRVLK 370 (415)
Q Consensus 293 ~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~--g~~~~~~G~i~v 370 (415)
++. . + .+++. +| +++++|+||+++|++|+. +.... ++ .+++|++.+
T Consensus 243 ~i~--~--~----~v~~~----------------~g--~~~~~D~vi~a~G~~~~~-----~l~~~~~~l-~~~~G~i~v 290 (409)
T 3h8l_A 243 EIR--E--H----EIVDE----------------KG--NTIPADITILLPPYTGNP-----ALKNSTPDL-VDDGGFIPT 290 (409)
T ss_dssp EEC--S--S----EEEET----------------TS--CEEECSEEEEECCEECCH-----HHHTSCGGG-SCTTSCBCB
T ss_pred EEC--C--C----eEEEC----------------CC--CEEeeeEEEECCCCCccH-----HHHhccccC-cCCCCCEEe
Confidence 885 2 2 23331 22 379999999999999965 32333 33 466799999
Q ss_pred ccCCCCCc-ccCCeeeeeccccC-CccchhhhhhhHHHHHhhcccc
Q 014990 371 NISGDSSQ-VENGLYVCGWLKRG-PTGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 371 ~~~~~~~t-~~p~vfaiGD~~~~-~~~~~~~a~~~g~~~a~~i~~~ 414 (415)
|+. +++ ++|||||+|||+.. .......|+.||+.||.+|...
T Consensus 291 d~~--~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 291 DLN--MVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp BTT--SBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred Ccc--cccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 986 666 89999999999852 2345557999999999998753
No 85
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.94 E-value=7.1e-28 Score=245.35 Aligned_cols=296 Identities=13% Similarity=0.115 Sum_probs=180.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc-------cccCCCCC---------C--------cch
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-------VRSGVAPD---------H--------PET 71 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~-------~~~~~~~~---------~--------~~~ 71 (415)
.+..++|||||||+||+++|..|++.+++.+|+|||+++.++.. +..+..+. + ..+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 34678999999999999999999998555999999998764311 11110000 0 000
Q ss_pred HHHHHHHHHH--hhccCeEEEeceEec------eEEEecccc-cccCEEEEccCCCCCCCCCCCCCC----CCCeeechh
Q 014990 72 KIVINQFSRV--VQHERCSFFGNVTLG------SSVSLSELR-QLYHVVVLAYGAESDRALGIPGED----LIGVHSARE 138 (415)
Q Consensus 72 ~~~~~~~~~~--~~~~~~~~~~~~~v~------~~v~~~~~~-~~~d~lvlAtG~~~~~~~~i~g~~----~~~v~~~~~ 138 (415)
.+.......+ ....+++++.++.+. +.+++.++. ..||+||||||+ .|+.|++++.. ..+++....
T Consensus 88 ~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs-~p~~~~~~~~~~~~~~~~v~~~~~ 166 (493)
T 1m6i_A 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG-TPRSLSAIDRAGAEVKSRTTLFRK 166 (493)
T ss_dssp GGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCE-EECCCHHHHTSCHHHHHTEEECCS
T ss_pred hHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCC-CCCCCCCcccccccccCceEEEcC
Confidence 0000000001 124578888875442 345555443 589999999999 67766655431 123433221
Q ss_pred hH--HHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCccc
Q 014990 139 FV--WWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (415)
Q Consensus 139 ~~--~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~ 216 (415)
.. ..+... +..+++|+|||+|.+|+|+|..|.+.. +..+ .+|+++.+.+...
T Consensus 167 ~~d~~~l~~~---------~~~~~~vvViGgG~iG~E~A~~l~~~~----------------~~~g-~~V~~v~~~~~~~ 220 (493)
T 1m6i_A 167 IGDFRSLEKI---------SREVKSITIIGGGFLGSELACALGRKA----------------RALG-TEVIQLFPEKGNM 220 (493)
T ss_dssp HHHHHHHHHH---------HHHCSEEEEECCSHHHHHHHHHHHHHH----------------HHHT-CEEEEECSSSSTT
T ss_pred HHHHHHHHHH---------hhcCCeEEEECCCHHHHHHHHHHHhhh----------------hhcC-CEEEEEecCcccc
Confidence 11 111110 114799999999999999999987410 0012 3788887764321
Q ss_pred CCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccc
Q 014990 217 AACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLE 296 (415)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~ 296 (415)
... +| +.+...+.+.+. +.||+++++..+.++.
T Consensus 221 ~~~-------------------------l~--------~~~~~~~~~~l~-------------~~GV~v~~~~~V~~i~- 253 (493)
T 1m6i_A 221 GKI-------------------------LP--------EYLSNWTMEKVR-------------REGVKVMPNAIVQSVG- 253 (493)
T ss_dssp TTT-------------------------SC--------HHHHHHHHHHHH-------------TTTCEEECSCCEEEEE-
T ss_pred ccc-------------------------CC--------HHHHHHHHHHHH-------------hcCCEEEeCCEEEEEE-
Confidence 111 11 111112222222 6789999999888886
Q ss_pred cCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccC-CCceeeccCCC
Q 014990 297 SNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNI-RGRVLKNISGD 375 (415)
Q Consensus 297 ~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~-~G~i~v~~~~~ 375 (415)
. +++.+ .+++. +| ++++||.||+|+|++|+. .+....|+.+++ +|.+.+|++
T Consensus 254 -~-~~~~~-~v~l~----------------dG--~~i~aD~Vv~a~G~~pn~----~l~~~~gl~~~~~~ggi~Vd~~-- 306 (493)
T 1m6i_A 254 -V-SSGKL-LIKLK----------------DG--RKVETDHIVAAVGLEPNV----ELAKTGGLEIDSDFGGFRVNAE-- 306 (493)
T ss_dssp -E-ETTEE-EEEET----------------TS--CEEEESEEEECCCEEECC----TTHHHHTCCBCTTTCSEECCTT--
T ss_pred -e-cCCeE-EEEEC----------------CC--CEEECCEEEECCCCCccH----HHHHHcCCccccCCCcEEECCC--
Confidence 3 23322 33321 23 379999999999999976 344455666664 588899986
Q ss_pred CCcccCCeeeeeccccCCc------c--chhhhhhhHHHHHhhccc
Q 014990 376 SSQVENGLYVCGWLKRGPT------G--IIATNLYCAEETVSSLSL 413 (415)
Q Consensus 376 ~~t~~p~vfaiGD~~~~~~------~--~~~~a~~~g~~~a~~i~~ 413 (415)
+++ .|||||+|||+..+. . ....|+.||+.||.+|..
T Consensus 307 l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g 351 (493)
T 1m6i_A 307 LQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTG 351 (493)
T ss_dssp CEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTS
T ss_pred ccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcC
Confidence 666 699999999985321 1 123699999999999864
No 86
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.94 E-value=4.2e-26 Score=230.39 Aligned_cols=331 Identities=14% Similarity=0.096 Sum_probs=185.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCC---ceEEEEcCCCCCCCccccC-----C------------CCC----------
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQE---AQVDIIDRLPTPFGLVRSG-----V------------APD---------- 67 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~---~~v~lie~~~~~gg~~~~~-----~------------~~~---------- 67 (415)
..++|||||||+||+++|..|++.++. .+|+|||+.+.+|...... . .|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 356899999999999999999999744 7999999998766322100 0 000
Q ss_pred --------------CcchHHHHHHHHHHhhccCeEEEeceEece-------------EEEeccc-----ccccCEEEEcc
Q 014990 68 --------------HPETKIVINQFSRVVQHERCSFFGNVTLGS-------------SVSLSEL-----RQLYHVVVLAY 115 (415)
Q Consensus 68 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------~v~~~~~-----~~~~d~lvlAt 115 (415)
+....++..++.+..+.+++.++.++.+.. .+...+. ...||+||+||
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAt 188 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSP 188 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECC
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECC
Confidence 111234555666777777777776664411 2333332 35799999999
Q ss_pred CCCCCCCCC-CCCCCCC-CeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhH
Q 014990 116 GAESDRALG-IPGEDLI-GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASY 193 (415)
Q Consensus 116 G~~~~~~~~-i~g~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~ 193 (415)
|+ .|..|+ +++.... .+++..++........ .....+++|+|||+|.+|+|+|..|.+
T Consensus 189 G~-~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~vvVvGgG~sg~e~a~~l~~------------- 248 (463)
T 3s5w_A 189 GG-TPRIPQVFRALKGDGRVFHHSQYLEHMAKQP------CSSGKPMKIAIIGGGQSAAEAFIDLND------------- 248 (463)
T ss_dssp CC-EECCCGGGGGGTTCTTEEEGGGHHHHHCC-------------CEEEEEECCSHHHHHHHHHHHH-------------
T ss_pred CC-CCCCcchhhhcCCCCcEEECHHHHhhHHHhh------hcccCCCeEEEECCCHhHHHHHHHHHh-------------
Confidence 99 666655 3343333 5677777665443211 011258999999999999999999986
Q ss_pred HHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccCCCCCcHH------------hhhchHHHHHH
Q 014990 194 AWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEE------------EMKNSRIQRRV 261 (415)
Q Consensus 194 ~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~------------~~~~~~~~~~~ 261 (415)
..+..+|+++.|++.+......+-..+... |.. ...+..++.... ......+-..+
T Consensus 249 ------~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~-p~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (463)
T 3s5w_A 249 ------SYPSVQADMILRASALKPADDSPFVNEVFA-PKF-----TDLIYSREHAERERLLREYHNTNYSVVDTDLIERI 316 (463)
T ss_dssp ------HCTTEEEEEECSSSSCCBCCCCHHHHGGGS-HHH-----HHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHH
T ss_pred ------cCCCCeEEEEEeCCCCcCccCCccchhccC-hhH-----HHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHH
Confidence 234579999999875422110000000000 000 000000000000 00000111112
Q ss_pred HHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEe
Q 014990 262 YELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKS 341 (415)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~a 341 (415)
++.++..... ...+|.+++++.+.++. . ++....+++.+. .+|+.+++++|.||+|
T Consensus 317 ~~~l~~~~~~-------~~~~v~i~~~~~v~~v~--~--~~~~~~v~~~~~-------------~~g~~~~~~~D~Vv~A 372 (463)
T 3s5w_A 317 YGVFYRQKVS-------GIPRHAFRCMTTVERAT--A--TAQGIELALRDA-------------GSGELSVETYDAVILA 372 (463)
T ss_dssp HHHHHHHHHH-------CCCCSEEETTEEEEEEE--E--ETTEEEEEEEET-------------TTCCEEEEEESEEEEC
T ss_pred HHHHHHHHhc-------CCCCeEEEeCCEEEEEE--e--cCCEEEEEEEEc-------------CCCCeEEEECCEEEEe
Confidence 2222211111 13689999999888886 3 333234554431 1456668999999999
Q ss_pred eccCCccCCCCcccCCCCccccCCCceeeccCCCCCcc-----cCCeeeeecccc--C--CccchhhhhhhHHHHHhhc
Q 014990 342 IGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQV-----ENGLYVCGWLKR--G--PTGIIATNLYCAEETVSSL 411 (415)
Q Consensus 342 tG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~-----~p~vfaiGD~~~--~--~~~~~~~a~~~g~~~a~~i 411 (415)
||++|+... ++........ |.+.+|++ +++. .|+|||+|||.. + ...+...|.+++.+++..+
T Consensus 373 tG~~p~~~~--~~l~~l~~~~---g~i~v~~~--~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 373 TGYERQLHR--QLLEPLAEYL---GDHEIGRD--YRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLY 444 (463)
T ss_dssp CCEECCC-C--TTTGGGGGGB---C--CCCTT--SBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHH
T ss_pred eCCCCCCcc--chhHHHHHHh---CCcccCcc--cccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHH
Confidence 999997322 2322211111 67777775 3322 577999999973 1 2234446778887776543
No 87
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.94 E-value=6.3e-27 Score=234.41 Aligned_cols=291 Identities=13% Similarity=0.096 Sum_probs=180.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc-CCCCCCcchHHHHHHHHHHhhccCeEEEeceEec--
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG-- 96 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-- 96 (415)
++|+|||||+||+++|..|++.+++++|+|||+++.++..... ....+.....++...+.+.++..+++++.+....
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id 82 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEEE
Confidence 6899999999999999999994334999999999876543211 0101122223333344556666788888764432
Q ss_pred ---eEEEecccc-cccCEEEEccCCCCCCCCCCCCCCC----CCeeechhhH---HHhcCCCCCCCCCCCCCCCCeEEEE
Q 014990 97 ---SSVSLSELR-QLYHVVVLAYGAESDRALGIPGEDL----IGVHSAREFV---WWYNGHPDGKNLSPDLKSTDTAVIL 165 (415)
Q Consensus 97 ---~~v~~~~~~-~~~d~lvlAtG~~~~~~~~i~g~~~----~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~k~V~VV 165 (415)
..+..++.. ..||+||+|||+ .+..| |... ..+.+..+.. ..+.. ...+++++||
T Consensus 83 ~~~~~v~~~~g~~i~~d~liiAtG~-~~~~p---g~~~~g~~~~~~~~~~a~~~~~~~~~----------~~~~~~~vVV 148 (430)
T 3h28_A 83 PDANTVTTQSGKKIEYDYLVIATGP-KLVFG---AEGQEENSTSICTAEHALETQKKLQE----------LYANPGPVVI 148 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCC-EEECC---SBTHHHHSCCCSSHHHHHHHHHHHHH----------HHHSCCCEEE
T ss_pred CCCCEEEECCCcEEECCEEEEcCCc-ccccC---CCCCcCCccCcCCHHHHHHHHHHHHH----------HHhcCCeEEE
Confidence 234444444 589999999999 44443 3321 1122222211 11110 0024557889
Q ss_pred cCChhH------HHHHHHHhcCcccccccCchhHHHHHhhcCCc---ceEEEEeecCcccCCCCHHHHHHHHcCCCeeEE
Q 014990 166 GQGNVA------LDVARILLRPTEELATTDIASYAWTALEGSSI---RKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (415)
Q Consensus 166 G~G~sg------~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (415)
|+|+++ +|+|..+.. .+++.+. .+|+++.+.+.+.. +.
T Consensus 149 GgG~~~~~~G~~~E~a~~la~----------------~l~~~g~~~~~~V~~v~~~~~~~~-~~---------------- 195 (430)
T 3h28_A 149 GAIPGVSCFGPAYEFALMLHY----------------ELKKRGIRYKVPMTFITSEPYLGH-FG---------------- 195 (430)
T ss_dssp EECTTCCCCHHHHHHHHHHHH----------------HHHHTTCGGGCCEEEECSSSSTTC-TT----------------
T ss_pred EcCCCCCcCcHHHHHHHHHHH----------------HHHHcCCccceEEEEecCCccccc-cc----------------
Confidence 998765 898876653 1222332 36888887753210 00
Q ss_pred EcccccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecC
Q 014990 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKG 316 (415)
Q Consensus 237 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~ 316 (415)
++.. ......+.+.+. +.||+++++..+.++. . + .+++.+.
T Consensus 196 --------l~~~------~~~~~~l~~~l~-------------~~GV~i~~~~~v~~v~--~--~----~v~~~~~---- 236 (430)
T 3h28_A 196 --------VGGI------GASKRLVEDLFA-------------ERNIDWIANVAVKAIE--P--D----KVIYEDL---- 236 (430)
T ss_dssp --------TTCS------TTHHHHHHHHHH-------------HTTCEEECSCEEEEEC--S--S----EEEEECT----
T ss_pred --------cCcc------hHHHHHHHHHHH-------------HCCCEEEeCCEEEEEe--C--C----eEEEEec----
Confidence 0000 001112223332 5689999999998886 2 3 2444332
Q ss_pred CCCCcceeccCCceEEEecCeeEEeeccCCccCCCCcccCC-CCccccCCC-ceeeccCCCCCc-ccCCeeeeeccccCC
Q 014990 317 GGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNH-KGIVPNIRG-RVLKNISGDSSQ-VENGLYVCGWLKRGP 393 (415)
Q Consensus 317 ~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~-~g~~~~~~G-~i~v~~~~~~~t-~~p~vfaiGD~~~~~ 393 (415)
.++++++++|+|++++|++|+. .+... .++ .+++| ++.+|++ +++ ++|||||+|||+..+
T Consensus 237 ----------~~~g~~i~~D~vv~a~G~~~~~----~l~~~~~gl-~~~~G~~i~Vd~~--l~t~~~~~Ifa~GD~~~~~ 299 (430)
T 3h28_A 237 ----------NGNTHEVPAKFTMFMPSFQGPE----VVASAGDKV-ANPANKMVIVNRC--FQNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp ----------TSCEEEEECSEEEEECEEECCH----HHHTTCTTT-BCTTTCCBCCCTT--SBCSSSTTEEECSTTBCCC
T ss_pred ----------CCCceEEeeeEEEECCCCccch----hHhhccccC-cCCCCCEEecCcc--ccCCCCCCEEEEEeeeccC
Confidence 2455689999999999999864 12222 455 67789 9999996 566 999999999998632
Q ss_pred -----------ccchhhhhhhHHHHHhhccc
Q 014990 394 -----------TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 394 -----------~~~~~~a~~~g~~~a~~i~~ 413 (415)
......|+.||+.+|.||..
T Consensus 300 ~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 300 PIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 23455799999999999875
No 88
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=2.3e-25 Score=226.87 Aligned_cols=249 Identities=15% Similarity=0.087 Sum_probs=176.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCC--CCCc-chHHHHHHHHHHhhccCeEEEeceEe
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVA--PDHP-ETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
.++|+|||||+||+++|.+|++. .+|+|||+++.+||.+.+... .++. ...++...+.+.+ ..++++..+..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 45899999999999999999987 899999999998887654221 1111 3344545555444 558888777654
Q ss_pred ce--------EEEe-ccc---ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEE
Q 014990 96 GS--------SVSL-SEL---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAV 163 (415)
Q Consensus 96 ~~--------~v~~-~~~---~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~ 163 (415)
.. .+.. +.. ...||+||+|||+ .++.|++||.+.+++++..++....+... ..++++++
T Consensus 184 ~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa-~~~~~~~~g~~~~gv~~~~~~~~~~~~~~--------~~~~~~vv 254 (493)
T 1y56_A 184 LGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA-IDSTMLFENNDMPGVFRRDFALEVMNVWE--------VAPGRKVA 254 (493)
T ss_dssp CCCEECSSSEEEEEEETTEEEEEEESCEEECCCE-EECCCCCTTTTSTTEEEHHHHHHHHHTSC--------BCSCSEEE
T ss_pred EEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC-CccCCCCCCCCCCCEEEcHHHHHHHHhcc--------cCCCCEEE
Confidence 11 1111 222 3579999999999 78888999999889988766554333211 22679999
Q ss_pred EEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEcccccC
Q 014990 164 ILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLI 243 (415)
Q Consensus 164 VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (415)
|||+|.+|+| ..+.
T Consensus 255 ViGgG~~gle--~~l~---------------------------------------------------------------- 268 (493)
T 1y56_A 255 VTGSKADEVI--QELE---------------------------------------------------------------- 268 (493)
T ss_dssp EESTTHHHHH--HHHH----------------------------------------------------------------
T ss_pred EECCCHHHHH--HHHH----------------------------------------------------------------
Confidence 9999999988 1111
Q ss_pred CCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcce
Q 014990 244 KSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQY 323 (415)
Q Consensus 244 ~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~ 323 (415)
+.||+++++..+.++. . ++.+..+.+.
T Consensus 269 ------------------------------------~~GV~v~~~~~v~~i~--~--~~~v~~v~~~------------- 295 (493)
T 1y56_A 269 ------------------------------------RWGIDYVHIPNVKRVE--G--NEKVERVIDM------------- 295 (493)
T ss_dssp ------------------------------------HHTCEEEECSSEEEEE--C--SSSCCEEEET-------------
T ss_pred ------------------------------------hCCcEEEeCCeeEEEe--c--CCceEEEEeC-------------
Confidence 3468888888888886 4 4444444421
Q ss_pred eccCCceEEEecCeeEEeeccCCccCCCCcccCCCCcc--ccCCCcee-eccCCCCCcccCCeeeeeccccCCccchhhh
Q 014990 324 AVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIV--PNIRGRVL-KNISGDSSQVENGLYVCGWLKRGPTGIIATN 400 (415)
Q Consensus 324 ~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~--~~~~G~i~-v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a 400 (415)
+| +++++|.||+|+|++|+. .+....|+. ++++|++. +|++ ++ +.|+|||+|||+..+ . ...|
T Consensus 296 ---~g--~~i~aD~Vv~a~G~~p~~----~l~~~~g~~~~~~~~g~i~~vd~~--~~-s~~~vya~GD~~~~~-~-~~~A 361 (493)
T 1y56_A 296 ---NN--HEYKVDALIFADGRRPDI----NPITQAGGKLRFRRGYYSPVLDEY--HR-IKDGIYVAGSAVSIK-P-HYAN 361 (493)
T ss_dssp ---TC--CEEECSEEEECCCEEECC----HHHHHTTCCEEEETTEEEECCCTT--SE-EETTEEECSTTTCCC-C-HHHH
T ss_pred ---CC--eEEEeCEEEECCCcCcCc----hHHHhcCCCccccCCceeeccccc--cC-cCCCEEEEeccCCcc-C-HHHH
Confidence 22 379999999999999975 233444443 34678877 7776 56 999999999998543 3 4479
Q ss_pred hhhHHHHHhhccc
Q 014990 401 LYCAEETVSSLSL 413 (415)
Q Consensus 401 ~~~g~~~a~~i~~ 413 (415)
+.||+.||.+|..
T Consensus 362 ~~~g~~aa~~i~~ 374 (493)
T 1y56_A 362 YLEGKLVGAYILK 374 (493)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999865
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.93 E-value=2.9e-25 Score=228.02 Aligned_cols=163 Identities=17% Similarity=0.157 Sum_probs=118.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHH-HcCCCceEEEEcCCCCCCCccccCCCCC---------------------------Cc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTL-KAHQEAQVDIIDRLPTPFGLVRSGVAPD---------------------------HP 69 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~-~~g~~~~v~lie~~~~~gg~~~~~~~~~---------------------------~~ 69 (415)
..++|+|||||+||+++|..|+ +.| .+|+|||+.+.+||.+.....|+ +.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G--~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 84 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELG--LTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYI 84 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC--CCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCC--CCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCC
Confidence 4579999999999999999999 887 89999999988887654322121 11
Q ss_pred chHHHHHHHHHHhhccCe--EEEeceEece----------EEEecccc-cccCEEEEccCC-CCCCCCCCCCCC-CC-Ce
Q 014990 70 ETKIVINQFSRVVQHERC--SFFGNVTLGS----------SVSLSELR-QLYHVVVLAYGA-ESDRALGIPGED-LI-GV 133 (415)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~--~~~~~~~v~~----------~v~~~~~~-~~~d~lvlAtG~-~~~~~~~i~g~~-~~-~v 133 (415)
...++..++...++++++ .+..++.+.. .++++++. ..||+||+|||. ..|+.|++||.+ .. .+
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~ 164 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGET 164 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCE
Confidence 234667777887877776 5666655421 34444444 579999999996 468889999976 22 23
Q ss_pred eechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
++...+.. .. ...+|+|+|||+|.+|+|+|..|++ ...+|+++.|++
T Consensus 165 ~~~~~~~~---~~---------~~~~krV~VIG~G~sgve~a~~l~~---------------------~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 165 IHTAAWPE---GK---------SLAGRRVGVIGTGSTGQQVITSLAP---------------------EVEHLTVFVRTP 211 (540)
T ss_dssp EEGGGCCS---SC---------CCTTSEEEEECCSHHHHHHHHHHTT---------------------TCSEEEEEESSC
T ss_pred EEeecCCC---cc---------ccccceEEEECCCchHHHHHHHHHh---------------------hCCEEEEEECCC
Confidence 33332221 11 1268999999999999999999996 357999999997
Q ss_pred cc
Q 014990 214 PV 215 (415)
Q Consensus 214 ~~ 215 (415)
.+
T Consensus 212 ~~ 213 (540)
T 3gwf_A 212 QY 213 (540)
T ss_dssp CC
T ss_pred Cc
Confidence 63
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.91 E-value=1.8e-23 Score=214.98 Aligned_cols=171 Identities=18% Similarity=0.196 Sum_probs=116.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCC---------------------------Cc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPD---------------------------HP 69 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~---------------------------~~ 69 (415)
+..++|||||||+||+++|..|++.+ .+|+|||+.+.+||.+.....|+ +.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g--~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~ 84 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAG--MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFA 84 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCC--CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCC
Confidence 35679999999999999999999988 99999999998888764332221 22
Q ss_pred chHHHHHHHHHHhhccCe--EEEeceEece----------EEEeccc-ccccCEEEEccCC-CCCCCCCCCCCC-CCC-e
Q 014990 70 ETKIVINQFSRVVQHERC--SFFGNVTLGS----------SVSLSEL-RQLYHVVVLAYGA-ESDRALGIPGED-LIG-V 133 (415)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~--~~~~~~~v~~----------~v~~~~~-~~~~d~lvlAtG~-~~~~~~~i~g~~-~~~-v 133 (415)
...++..++...++.+++ .+..++.+.. .++++++ ...||+||+|||. ..|+.|++||.+ ..+ .
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~ 164 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGES 164 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCe
Confidence 345677777777777665 4555554421 3444444 3479999999994 268888999976 222 3
Q ss_pred eechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
++...+.......++ .....+|+|+|||+|.+|+|+|..|++ ..++|+++.|++
T Consensus 165 ~h~~~~~~~~~~~~~-----~~~~~~krV~VIG~G~tgve~a~~la~---------------------~~~~Vtv~~r~~ 218 (545)
T 3uox_A 165 FHSSRWPTDAEGAPK-----GVDFTGKRVGVIGTGATGVQIIPIAAE---------------------TAKELYVFQRTP 218 (545)
T ss_dssp EEGGGCCBCTTSCBS-----CCCCBTCEEEEECCSHHHHHHHHHHTT---------------------TBSEEEEEESSC
T ss_pred EEccccccccccccc-----ccccCCCeEEEECCCccHHHHHHHHHh---------------------hCCEEEEEEcCC
Confidence 343322211000000 011268999999999999999999996 357999999997
Q ss_pred cc
Q 014990 214 PV 215 (415)
Q Consensus 214 ~~ 215 (415)
.+
T Consensus 219 ~~ 220 (545)
T 3uox_A 219 NW 220 (545)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.90 E-value=5e-23 Score=211.83 Aligned_cols=164 Identities=15% Similarity=0.200 Sum_probs=118.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCC---------------------------Ccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPD---------------------------HPE 70 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~---------------------------~~~ 70 (415)
..++|||||||+||+++|..|++.+ .+|+|||+.+.+||.+.....|+ +..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G--~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~ 97 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQG--LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYAT 97 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCB
T ss_pred CCCCEEEECchHHHHHHHHHHHhCC--CCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCC
Confidence 4679999999999999999999988 99999999988887654221111 123
Q ss_pred hHHHHHHHHHHhhccCe--EEEeceEece----------EEEecccc-cccCEEEEccCC-CCCCCCCCCCCC-CC-Cee
Q 014990 71 TKIVINQFSRVVQHERC--SFFGNVTLGS----------SVSLSELR-QLYHVVVLAYGA-ESDRALGIPGED-LI-GVH 134 (415)
Q Consensus 71 ~~~~~~~~~~~~~~~~~--~~~~~~~v~~----------~v~~~~~~-~~~d~lvlAtG~-~~~~~~~i~g~~-~~-~v~ 134 (415)
..++..++...+++.++ .+..++.+.. .+++.++. ..||+||+|||. ..|+.|++||.+ .. .++
T Consensus 98 ~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~ 177 (549)
T 4ap3_A 98 QPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIV 177 (549)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceE
Confidence 34677788888887776 5666655421 34444444 579999999994 368889999976 32 234
Q ss_pred echhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 135 SAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
+...+.. .. .++ .+|+|+|||+|.+|+|+|..|++ ..++|+++.|++.
T Consensus 178 ~~~~~~~---~~-------~~~-~~krV~VIG~G~sgve~a~~l~~---------------------~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 178 HTARWPH---DG-------VDF-TGKRVGVIGTGSSGIQSIPIIAE---------------------QAEQLFVFQRSAN 225 (549)
T ss_dssp EGGGCCT---TC-------CCC-BTCEEEEECCSHHHHHHHHHHHH---------------------HBSEEEEEESSCC
T ss_pred Eeccccc---cc-------ccc-CCCEEEEECCCchHHHHHHHHHh---------------------hCCEEEEEECCCC
Confidence 4332210 00 011 68999999999999999999996 3469999999976
Q ss_pred c
Q 014990 215 V 215 (415)
Q Consensus 215 ~ 215 (415)
+
T Consensus 226 ~ 226 (549)
T 4ap3_A 226 Y 226 (549)
T ss_dssp C
T ss_pred c
Confidence 4
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.89 E-value=5.6e-22 Score=204.16 Aligned_cols=165 Identities=15% Similarity=0.200 Sum_probs=113.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCC---------------------------CCc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAP---------------------------DHP 69 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~---------------------------~~~ 69 (415)
+..++|+|||||++|+++|..|++.| .+|+|||+.+.+||.+.....| .+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G--~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~ 91 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELG--RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYA 91 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCC--CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccC
Confidence 34679999999999999999999998 9999999998887755322111 111
Q ss_pred chHHHHHHHHHHhhccC--eEEEeceEece----------EEEeccc-ccccCEEEEccCC-CCCCCCCCCCCC-CCC-e
Q 014990 70 ETKIVINQFSRVVQHER--CSFFGNVTLGS----------SVSLSEL-RQLYHVVVLAYGA-ESDRALGIPGED-LIG-V 133 (415)
Q Consensus 70 ~~~~~~~~~~~~~~~~~--~~~~~~~~v~~----------~v~~~~~-~~~~d~lvlAtG~-~~~~~~~i~g~~-~~~-v 133 (415)
...++.+++....++++ ..+..++.+.. .++.+++ ...+|+||+|||. ..|+.|++||.+ .++ +
T Consensus 92 ~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~ 171 (542)
T 1w4x_A 92 SQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNL 171 (542)
T ss_dssp BHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCce
Confidence 23355666666666554 34555554421 2344444 3479999999996 368888999975 333 3
Q ss_pred eechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
++...+.. ... ...+|+|+|||+|.+|+|++..|.+ ...+|+++.|++
T Consensus 172 ~hs~~~~~---~~~--------~~~gk~V~VIG~G~sg~e~a~~l~~---------------------~~~~vtv~~r~~ 219 (542)
T 1w4x_A 172 YHTGNWPH---EPV--------DFSGQRVGVIGTGSSGIQVSPQIAK---------------------QAAELFVFQRTP 219 (542)
T ss_dssp EEGGGCCS---SCC--------CCBTCEEEEECCSHHHHHHHHHHHH---------------------HBSEEEEEESSC
T ss_pred EECCCCCC---chh--------ccCCCEEEEECCCccHHHHHHHHhh---------------------cCceEEEEEcCC
Confidence 33322210 000 1268999999999999999999986 346899999986
Q ss_pred cc
Q 014990 214 PV 215 (415)
Q Consensus 214 ~~ 215 (415)
.+
T Consensus 220 ~~ 221 (542)
T 1w4x_A 220 HF 221 (542)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.84 E-value=5.8e-19 Score=179.82 Aligned_cols=171 Identities=14% Similarity=0.085 Sum_probs=115.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcC------------CCceEEEEcCCCCCCC---ccccC------------------
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAH------------QEAQVDIIDRLPTPFG---LVRSG------------------ 63 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g------------~~~~v~lie~~~~~gg---~~~~~------------------ 63 (415)
..-++|||||+||+||++|..|.+.+ .....+.+|+.+.++. ++..+
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 34579999999999999999998764 1246788899875431 11000
Q ss_pred --------------------CCCCCcchHHHHHHHHHHhhccCeEEEeceEec----------------eEEEeccc---
Q 014990 64 --------------------VAPDHPETKIVINQFSRVVQHERCSFFGNVTLG----------------SSVSLSEL--- 104 (415)
Q Consensus 64 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----------------~~v~~~~~--- 104 (415)
....++...++.+|+++.+++++..+++++.|. ..|+..+.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g 196 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETG 196 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTC
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCc
Confidence 001233445788888888888776666666552 12333322
Q ss_pred ---ccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHHHHhcC
Q 014990 105 ---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRP 181 (415)
Q Consensus 105 ---~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~~L~~~ 181 (415)
...+++||+|||. .|..|..++. .+.++|+.+|........ .....+|+|+|||+|+||+|++.+|++
T Consensus 197 ~~~~~~ar~vVlatG~-~P~iP~~~~~-~g~v~Hss~y~~~~~~~~------~~~~~gKrV~VVG~G~SA~ei~~~L~~- 267 (501)
T 4b63_A 197 EISARRTRKVVIAIGG-TAKMPSGLPQ-DPRIIHSSKYCTTLPALL------KDKSKPYNIAVLGSGQSAAEIFHDLQK- 267 (501)
T ss_dssp CEEEEEEEEEEECCCC-EECCCTTSCC-CTTEEEGGGHHHHHHHHS------CCTTSCCEEEEECCSHHHHHHHHHHHH-
T ss_pred eEEEEEeCEEEECcCC-CCCCCCCCCC-Ccceeeccccccchhhcc------ccccCCcEEEEECCcHHHHHHHHHHHh-
Confidence 1257899999997 6776665544 356888888776543110 011279999999999999999999985
Q ss_pred cccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 182 TEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
.....+|++++|++.
T Consensus 268 ------------------~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 268 ------------------RYPNSRTTLIMRDSA 282 (501)
T ss_dssp ------------------HSTTCEEEEECSSSS
T ss_pred ------------------cCCCceEEEEeCCCc
Confidence 234578999999854
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.66 E-value=3e-16 Score=137.51 Aligned_cols=166 Identities=13% Similarity=0.059 Sum_probs=108.9
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCCCHHHHHHHHcCCCeeEEEccc
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIRED 240 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (415)
+|+|||+|++|+++|..|.+ .+ .+|+++.+++...... .
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~--------------------~g-~~v~lie~~~~~~~~~--------------------~ 41 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLAR--------------------AG-LKVLVLDGGRSKVKGV--------------------S 41 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEEECSCCTTTTC--------------------S
T ss_pred eEEEECCCHHHHHHHHHHHH--------------------CC-CcEEEEeCCCCcccCc--------------------h
Confidence 69999999999999999996 34 5899999886321100 0
Q ss_pred ccCCCCCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCC
Q 014990 241 DLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPG 320 (415)
Q Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g 320 (415)
.+...|.....+....+...+.+.+. +.|++++++ .+.++. . +++.+ .++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~l~~~~~-------------~~gv~v~~~-~v~~i~--~-~~~~~-~v~------------ 91 (180)
T 2ywl_A 42 RVPNYPGLLDEPSGEELLRRLEAHAR-------------RYGAEVRPG-VVKGVR--D-MGGVF-EVE------------ 91 (180)
T ss_dssp CCCCSTTCTTCCCHHHHHHHHHHHHH-------------HTTCEEEEC-CCCEEE--E-CSSSE-EEE------------
T ss_pred hhhccCCCcCCCCHHHHHHHHHHHHH-------------HcCCEEEeC-EEEEEE--E-cCCEE-EEE------------
Confidence 00011111011111222233333332 457889888 888876 3 22221 121
Q ss_pred cceeccCCceEEEecCeeEEeeccCCccCCCCcccCCCCccccCCCceeeccCCCCCcccCCeeeeeccccCCccchhhh
Q 014990 321 KQYAVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATN 400 (415)
Q Consensus 321 ~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~~~~~~~~~a 400 (415)
..++ ++++|.||+|+|..|+. ....++.++ +|.+.+|++ ++|+.|+|||+|||+..+......|
T Consensus 92 ------~~~g-~i~ad~vI~A~G~~~~~------~~~~g~~~~-~g~i~vd~~--~~t~~~~i~a~GD~~~~~~~~~~~A 155 (180)
T 2ywl_A 92 ------TEEG-VEKAERLLLCTHKDPTL------PSLLGLTRR-GAYIDTDEG--GRTSYPRVYAAGVARGKVPGHAIIS 155 (180)
T ss_dssp ------CSSC-EEEEEEEEECCTTCCHH------HHHHTCCEE-TTEECCCTT--CBCSSTTEEECGGGGTCCSCCHHHH
T ss_pred ------ECCC-EEEECEEEECCCCCCCc------cccCCCCcc-CceEEeCCC--CCcCCCCEEEeecccCcchhhHHHH
Confidence 1122 69999999999999842 123355667 899999987 8899999999999987655345579
Q ss_pred hhhHHHHHhhccc
Q 014990 401 LYCAEETVSSLSL 413 (415)
Q Consensus 401 ~~~g~~~a~~i~~ 413 (415)
+.||+.+|.+|..
T Consensus 156 ~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 156 AGDGAYVAVHLVS 168 (180)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHH
Confidence 9999999999864
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.2e-19 Score=171.78 Aligned_cols=140 Identities=16% Similarity=0.092 Sum_probs=85.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCC-CCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-APDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
..+||+||||||||++||.+|++...+++|+|||+.+.+||.+.++- .+...... .....++++.++++..+...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~---~~~~~~~~e~Gv~~~~~~~~- 139 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR---KPAHLFLQELEIPYEDEGDY- 139 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEE---TTTHHHHHHTTCCCEECSSE-
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHH---HHHHHHHHHcCCEEEECCcc-
Confidence 46799999999999999999986422399999999999999877542 11111111 12233455567665443221
Q ss_pred eEEEecccccccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcCCCCCCCCCCCCCCCCeEEEEcCChhHHHHHH
Q 014990 97 SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVAR 176 (415)
Q Consensus 97 ~~v~~~~~~~~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~V~VVG~G~sg~e~a~ 176 (415)
....+.++++++. .++.+.++|..........++.. ... ....+++++|||+|.++++.|.
T Consensus 140 --------~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~--~~~--------~~~~~~~v~viggg~~av~~a~ 200 (326)
T 3fpz_A 140 --------VVVKHAALFISTV-LSKVLQLPNVKLFNATCVEDLVT--RPP--------TEKGEVTVAGVVTNWTLVTQAH 200 (326)
T ss_dssp --------EEESCHHHHHHHH-HHHHHTSTTEEEETTEEEEEEEE--ESS--------CSSSSCEEEEEEEEEHHHHTCT
T ss_pred --------eecceeEEEEcch-hhhccccccceeecccccceeec--cCC--------cccCCCEEEEEccCceeeehhh
Confidence 1122234445554 45666777765222222222211 011 1236899999999999999997
Q ss_pred HHhc
Q 014990 177 ILLR 180 (415)
Q Consensus 177 ~L~~ 180 (415)
.+..
T Consensus 201 ~~~~ 204 (326)
T 3fpz_A 201 GTQC 204 (326)
T ss_dssp TSSS
T ss_pred hhhh
Confidence 7764
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.35 E-value=6.6e-13 Score=134.05 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=29.9
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 21 RVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 21 ~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
+|+|||||+||+++|..|++.| .+|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G--~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAG--KKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--CCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--CCEEEEeCC
Confidence 6999999999999999999999 999999998
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.14 E-value=1.3e-10 Score=105.92 Aligned_cols=35 Identities=17% Similarity=0.023 Sum_probs=30.0
Q ss_pred cccCCeeeeeccccCCccchhhhhhhHHHHHhhcccc
Q 014990 378 QVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 378 t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~~ 414 (415)
|++||||++|||+ ... +...++.||+.+|.+|.+.
T Consensus 196 t~~p~iya~G~~a-~~g-~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 196 KRLEGLYAVGLCV-REG-DYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp TTSBSEEECGGGT-SCC-CHHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeecc-cCc-cHHHHHHHHHHHHHHHHhh
Confidence 6899999999999 544 6668899999999999753
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.90 E-value=7.3e-09 Score=90.06 Aligned_cols=96 Identities=18% Similarity=0.174 Sum_probs=68.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc-cccCCCCC---CcchHHHHHHHHHHhhccCeEEEeceEe
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-VRSGVAPD---HPETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
++|+|||||++|+++|..|++.+ .+|+|+|+.+..... ......|. .....++...+.+.+++.+++++.+ .+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g--~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v 78 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG--LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VV 78 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EE
Confidence 58999999999999999999999 999999998632111 00000012 1234577778888888889999887 44
Q ss_pred ce--------EEEecccccccCEEEEccCCC
Q 014990 96 GS--------SVSLSELRQLYHVVVLAYGAE 118 (415)
Q Consensus 96 ~~--------~v~~~~~~~~~d~lvlAtG~~ 118 (415)
.. .++.+++...+|.||+|+|..
T Consensus 79 ~~i~~~~~~~~v~~~~g~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 79 KGVRDMGGVFEVETEEGVEKAERLLLCTHKD 109 (180)
T ss_dssp CEEEECSSSEEEECSSCEEEEEEEEECCTTC
T ss_pred EEEEEcCCEEEEEECCCEEEECEEEECCCCC
Confidence 21 233344445799999999984
No 99
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.88 E-value=2.1e-09 Score=106.06 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=34.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
.++|+|||||+||+++|..|++.| .+|+|||+.+.+|
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G--~~V~vlEk~~~~g 40 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLG--KSVTVFDNGKKIG 40 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSC
T ss_pred CCCEEEECCcHHHHHHHHHHHhCC--CCEEEEeCCCCCc
Confidence 478999999999999999999999 9999999998764
No 100
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.87 E-value=4.6e-09 Score=104.12 Aligned_cols=106 Identities=22% Similarity=0.275 Sum_probs=68.6
Q ss_pred cccCCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc-----------cCC--------CCCC----
Q 014990 12 FTALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-----------SGV--------APDH---- 68 (415)
Q Consensus 12 ~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~-----------~~~--------~~~~---- 68 (415)
+..+.+..++|+|||||+||+++|..|++.| .+|+|+|+.+.+|+.+. ... .+.+
T Consensus 20 ~~~M~~~~~dViIIGgG~AGl~aA~~La~~G--~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~ 97 (417)
T 3v76_A 20 FQSMVAEKQDVVIIGAGAAGMMCAIEAGKRG--RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSA 97 (417)
T ss_dssp --------CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHH
T ss_pred cccccCCCCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHH
Confidence 3334456789999999999999999999999 99999999987654210 000 0000
Q ss_pred -------------------------------cchHHHHHHHHHHhhccCeEEEeceEece--------EEEecccccccC
Q 014990 69 -------------------------------PETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSLSELRQLYH 109 (415)
Q Consensus 69 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--------~v~~~~~~~~~d 109 (415)
....++.+.+.+.+++.+++++.++.+.. .+...++...+|
T Consensus 98 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g~i~ad 177 (417)
T 3v76_A 98 LARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAA 177 (417)
T ss_dssp HHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTEEEEES
T ss_pred HHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCcEEEee
Confidence 01124556667777777899988776522 233344455799
Q ss_pred EEEEccCCCC
Q 014990 110 VVVLAYGAES 119 (415)
Q Consensus 110 ~lvlAtG~~~ 119 (415)
+||+|+|...
T Consensus 178 ~VIlAtG~~S 187 (417)
T 3v76_A 178 SLVVASGGKS 187 (417)
T ss_dssp EEEECCCCSS
T ss_pred EEEECCCCcc
Confidence 9999999843
No 101
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.70 E-value=7e-08 Score=97.83 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=70.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCC----------------CC-------cchH
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAP----------------DH-------PETK 72 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~----------------~~-------~~~~ 72 (415)
.+..++|+|||||++|+++|..|++.| .+|+|||+.+.+|+.......| .+ ....
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G--~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 166 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLG--ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIR 166 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHH
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCC--CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHH
Confidence 346789999999999999999999999 9999999998766432111111 00 1124
Q ss_pred HHHHHHHHHhhccCeEEEeceEece-----------EEEe--c-cc---ccccCEEEEccCCC
Q 014990 73 IVINQFSRVVQHERCSFFGNVTLGS-----------SVSL--S-EL---RQLYHVVVLAYGAE 118 (415)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~v~~-----------~v~~--~-~~---~~~~d~lvlAtG~~ 118 (415)
++...+.+.++..+++++.++.+.. .+++ . ++ ...+|+||+|+|..
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 5556677777777899888766521 2333 2 33 34799999999983
No 102
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.67 E-value=1.6e-07 Score=88.04 Aligned_cols=39 Identities=38% Similarity=0.507 Sum_probs=35.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCCceEEEEcCCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTPFG 58 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~v~lie~~~~~gg 58 (415)
..++|+|||||++|+++|..|++. + .+|+|||+.+.+++
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G--~~V~viEk~~~~gg 77 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPN--VQVAIIEQSVSPGG 77 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTT--SCEEEEESSSSCCT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCC--CeEEEEECCCCCCC
Confidence 457999999999999999999997 7 99999999987764
No 103
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.65 E-value=2.1e-07 Score=84.45 Aligned_cols=96 Identities=19% Similarity=0.131 Sum_probs=63.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCC-----------------cchHHHHHHHHH
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDH-----------------PETKIVINQFSR 80 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~-----------------~~~~~~~~~~~~ 80 (415)
..++|+|||||++|+++|..|++.+ .+|+|||+.....|. . ..|.. +....+...+.+
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g--~~v~lie~~~~~~G~-~--~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~ 76 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKG--VRVGLLTQSLDAVMM-P--FLPPKPPFPPGSLLERAYDPKDERVWAFHARAKY 76 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCGGGTTC-C--SSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEecCCCcCCc-c--cCccccccchhhHHhhhccCCCCCHHHHHHHHHH
Confidence 3579999999999999999999999 999999998432221 1 11110 012244556667
Q ss_pred Hhhcc-CeEEEeceEece--------EEEeccc-ccccCEEEEccCCC
Q 014990 81 VVQHE-RCSFFGNVTLGS--------SVSLSEL-RQLYHVVVLAYGAE 118 (415)
Q Consensus 81 ~~~~~-~~~~~~~~~v~~--------~v~~~~~-~~~~d~lvlAtG~~ 118 (415)
.+++. +++++....... .+...++ ...+|+||+|+|..
T Consensus 77 ~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 77 LLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 77775 888774322111 1333333 35799999999983
No 104
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.63 E-value=1.2e-07 Score=92.36 Aligned_cols=100 Identities=15% Similarity=0.051 Sum_probs=67.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc--------------ccCC------------------
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV--------------RSGV------------------ 64 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~--------------~~~~------------------ 64 (415)
+..++|+|||||++|+++|..|++.| .+|+|||+.+.++... ..++
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G--~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 86 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNG--WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWM 86 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC--CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEe
Confidence 34689999999999999999999999 9999999987654210 0000
Q ss_pred ------------CCC-CcchHHHHHHHHHHhhccCeEEEeceEece-----EEEecccc-cccCEEEEccCCC
Q 014990 65 ------------APD-HPETKIVINQFSRVVQHERCSFFGNVTLGS-----SVSLSELR-QLYHVVVLAYGAE 118 (415)
Q Consensus 65 ------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~v~~~~~~-~~~d~lvlAtG~~ 118 (415)
.+. ......+...+.+.+...+++++.++.+.. .++..++. ..+|+||.|+|..
T Consensus 87 ~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 87 HNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp TTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTT
T ss_pred CCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCcc
Confidence 000 001134555666777777889888876532 34444443 5799999999984
No 105
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.58 E-value=4.1e-08 Score=89.37 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=37.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
.+|+||||||||++||..|++.| ++|+|||+.+.+||.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G--~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCCCccc
Confidence 57999999999999999999999 99999999999988653
No 106
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.58 E-value=4.6e-08 Score=91.71 Aligned_cols=122 Identities=12% Similarity=0.107 Sum_probs=68.2
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeee--eecCCCCCcceeccCCceEEEecCeeEEeeccCCccCCC------
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKT--ALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSVPVNG------ 351 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~--~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~~~~~------ 351 (415)
..|++++++..+.++. . +++.+.++.+... .+. ..+|. .++..++++|.||.|+|..++....
T Consensus 132 ~~gv~i~~~~~V~~i~--~-~~~~v~gv~~~~~~~~~~-~~~g~-----~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~ 202 (284)
T 1rp0_A 132 RPNVKLFNAVAAEDLI--V-KGNRVGGVVTNWALVAQN-HHTQS-----CMDPNVMEAKIVVSSCGHDGPFGATGVKRLK 202 (284)
T ss_dssp STTEEEEETEEEEEEE--E-ETTEEEEEEEEEHHHHTC-TTTSS-----CCCCEEEEEEEEEECCCSSSTTTTHHHHHHH
T ss_pred cCCCEEEcCcEEEEEE--e-cCCeEEEEEEeccccccc-cCccc-----cCceEEEECCEEEECCCCchHHHHHHHHHhh
Confidence 3589999999998886 4 3555656655321 000 00010 2334589999999999987632100
Q ss_pred -----CcccCCCCccccCCCceeeccCCCCCcccCCeeeeecccc---C-C--ccchhhhhhhHHHHHhhccc
Q 014990 352 -----LPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKR---G-P--TGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 352 -----~~~~~~~g~~~~~~G~i~v~~~~~~~t~~p~vfaiGD~~~---~-~--~~~~~~a~~~g~~~a~~i~~ 413 (415)
++.....++..+....+.++. ..++.|++|++||+.. + + ...+..++.+|+.+|.+|.+
T Consensus 203 ~~g~~~~v~~~~g~~~~~~~~~~v~~---~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 203 SIGMIDHVPGMKALDMNTAEDAIVRL---TREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HTTSSSCCCCCEEECHHHHHHHHHHH---CEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred hccCCCCcCCcCCchhhhhhHHHhhc---cccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 000001111111000112222 3467899999999862 1 1 11244688999999998865
No 107
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.48 E-value=3.2e-07 Score=91.65 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=34.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
..++|+|||||+||+++|..|++.| .+|+|+|+.+.+|
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G--~~V~llEk~~~~g 62 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEG--ANVLLLDKGNKLG 62 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC--CCEEEEECCCCCC
Confidence 4579999999999999999999999 9999999987655
No 108
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.48 E-value=4.7e-07 Score=93.57 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|+|||||+||++||..|++.| .+|+|||+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G--~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMG--QQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCC--CCEEEEeecc
Confidence 4689999999999999999999999 9999999874
No 109
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.48 E-value=3.4e-07 Score=88.97 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=34.9
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 14 ALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 14 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
+..+..++|+|||||++|+++|..|++.| .+|+|||+....
T Consensus 12 ~~~~~~~dvvIIGgG~~Gl~~A~~La~~G--~~V~llE~~~~~ 52 (382)
T 1ryi_A 12 RAMKRHYEAVVIGGGIIGSAIAYYLAKEN--KNTALFESGTMG 52 (382)
T ss_dssp --CCSEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSTT
T ss_pred hccCCCCCEEEECcCHHHHHHHHHHHhCC--CcEEEEeCCCCC
Confidence 33446789999999999999999999999 999999997543
No 110
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.46 E-value=6.5e-07 Score=92.29 Aligned_cols=41 Identities=37% Similarity=0.472 Sum_probs=36.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL 59 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~ 59 (415)
...++|||||||+||+++|..|++.| .+|+|||+.+.+|+.
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G--~~V~vlEk~~~~gg~ 164 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSG--AKVILIEKEPVIGGN 164 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCCCCc
Confidence 34689999999999999999999999 999999999876653
No 111
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.45 E-value=4.7e-07 Score=92.43 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
.++|+|||||++|+++|..|++.| ++|+|||+.+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G--~kV~VlEr~~~ 141 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKE 141 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTT--CCCEEECSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CeEEEEEccCc
Confidence 479999999999999999999999 99999999854
No 112
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.44 E-value=5.2e-07 Score=88.93 Aligned_cols=35 Identities=31% Similarity=0.498 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|+|||||+||+++|..|++.| .+|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G--~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSG--FKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 3479999999999999999999999 9999999985
No 113
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.40 E-value=2.4e-06 Score=81.79 Aligned_cols=41 Identities=20% Similarity=0.345 Sum_probs=35.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg 58 (415)
..++|+|||||+||+++|..|++..++.+|+|||+.+.+|+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GG 118 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGG 118 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCC
Confidence 46899999999999999999999822299999999987664
No 114
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.38 E-value=9.4e-07 Score=84.74 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=34.8
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCCceEEEEcCCCCCCCc
Q 014990 20 LRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPTPFGL 59 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~---~g~~~~v~lie~~~~~gg~ 59 (415)
++|+|||||++|+++|..|++ .| .+|+|||+.+.+||.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G--~~V~v~Ek~~~~gg~ 42 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGP--LYLAVWDKADDSGGR 42 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CC--EEEEEECSSSSSCGG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCC--ceEEEEECCCCCccc
Confidence 589999999999999999999 77 999999999877764
No 115
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.37 E-value=1.2e-06 Score=86.10 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=33.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
++++++|+|||||++|+++|..|++.| .+|+|||+.+.+
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~E~~~~~ 58 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSG--IDCDVYEAVKEI 58 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCCCC
Confidence 346789999999999999999999999 999999998653
No 116
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.37 E-value=1.6e-06 Score=82.65 Aligned_cols=39 Identities=26% Similarity=0.400 Sum_probs=35.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL 59 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~ 59 (415)
.++|+|||||++|+++|..|++.| .+|+|||+.+.+|+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G--~~V~vlE~~~~~gg~ 40 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGG
T ss_pred CceEEEECCcHHHHHHHHHHHHCC--CcEEEEECCCCCccc
Confidence 368999999999999999999999 999999999877664
No 117
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.36 E-value=1.9e-06 Score=87.97 Aligned_cols=36 Identities=31% Similarity=0.438 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G--~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQG--VRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCC
Confidence 4679999999999999999999999 99999999854
No 118
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.36 E-value=1.2e-06 Score=84.33 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G--~~V~vlE~~~~ 38 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAEG 38 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCC
Confidence 3579999999999999999999999 99999999864
No 119
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.34 E-value=1.4e-06 Score=85.24 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
..++|+|||||++|+++|..|++.| .+|+|||+.+.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G--~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQG--HRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC--CcEEEEeCCCCC
Confidence 3579999999999999999999999 999999998643
No 120
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.34 E-value=2e-06 Score=88.51 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=64.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCC-------------------cc------------c-cC-C
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG-------------------LV------------R-SG-V 64 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg-------------------~~------------~-~~-~ 64 (415)
..++|+|||||++|+++|..|++.| ++|+|||+.+.+.. .+ . ++ .
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G--~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGG--VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTT--CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 3579999999999999999999999 99999999754220 00 0 00 0
Q ss_pred -------------CCC--CcchHHHHHHHHHHhhccCeEEEeceEece--------EEEe--ccc--ccccCEEEEccCC
Q 014990 65 -------------APD--HPETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSL--SEL--RQLYHVVVLAYGA 117 (415)
Q Consensus 65 -------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--------~v~~--~~~--~~~~d~lvlAtG~ 117 (415)
.+. ......+...+.+.++..+++++.++.+.. .++. .++ ...+|+||.|.|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 000 012234455666666667888887776521 2333 334 3589999999998
Q ss_pred CC
Q 014990 118 ES 119 (415)
Q Consensus 118 ~~ 119 (415)
..
T Consensus 206 ~S 207 (570)
T 3fmw_A 206 RS 207 (570)
T ss_dssp SC
T ss_pred Cc
Confidence 43
No 121
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.33 E-value=2.2e-06 Score=83.32 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|+|||||++|+++|..|++.| .+|+|||+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G--~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRG--EEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 4679999999999999999999999 9999999984
No 122
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.32 E-value=2.6e-06 Score=89.51 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=33.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
..++|+|||||.+|+++|..|+++| .+|+|||+.+.++
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G--~~V~vlEk~~~~g 308 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRG--WQVTLYCADEAPA 308 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCccc
Confidence 4589999999999999999999999 9999999975443
No 123
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.31 E-value=2.4e-06 Score=83.28 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=33.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
.++|+|||||+||+++|..|++.| .+|+|||+.+.++
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G--~~V~l~E~~~~~g 40 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCCCC
Confidence 478999999999999999999999 9999999987544
No 124
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.29 E-value=2.1e-06 Score=88.70 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=33.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
+..++|+|||||+||+++|..|++.| .+|+|||+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G--~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLG--HDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCC--CCEEEEcCCCC
Confidence 34679999999999999999999999 99999999843
No 125
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.29 E-value=9.9e-07 Score=85.43 Aligned_cols=37 Identities=30% Similarity=0.300 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
..++|+|||||.+|+++|.+|+ +| .+|+|+|+.+.++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G--~~V~vlE~~~~~g 44 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AH--GRVVVLEREAQPG 44 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TT--SCEEEECSSSSTT
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CC--CCEEEEECCCCcc
Confidence 5789999999999999999999 58 9999999986544
No 126
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.27 E-value=2.2e-06 Score=88.24 Aligned_cols=40 Identities=40% Similarity=0.539 Sum_probs=36.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg 58 (415)
...++|||||||+||+++|..|++.| .+|+|||+.+.+++
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G--~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAG--ANVILVDKAPFSGG 158 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHT--CCEEEECSSSSSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCCCC
Confidence 35679999999999999999999999 99999999987664
No 127
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.27 E-value=1.6e-06 Score=83.93 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=32.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
.++|+|||||++|+++|..|++.| .+|+|||+.+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G--~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAG--LNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTT--CCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCC
Confidence 368999999999999999999999 999999998643
No 128
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.27 E-value=1.2e-06 Score=85.41 Aligned_cols=97 Identities=20% Similarity=0.199 Sum_probs=64.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC---CCcc---------------c-cC-CC--------------
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP---FGLV---------------R-SG-VA-------------- 65 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~---gg~~---------------~-~~-~~-------------- 65 (415)
++|+|||||+||+++|..|++..|+.+|+|+|+.+.+ |... . .. +.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 5899999999999999999999222999999998654 2110 0 00 00
Q ss_pred ------C-CC----cchHHHHHHHHHHhhccCeEEEeceEeceEEEecccccccCEEEEccCCC
Q 014990 66 ------P-DH----PETKIVINQFSRVVQHERCSFFGNVTLGSSVSLSELRQLYHVVVLAYGAE 118 (415)
Q Consensus 66 ------~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~~~~d~lvlAtG~~ 118 (415)
. +. ....++...+.+.++..+++++.++.+..... .....+|.||.|+|..
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~~~~ad~vV~AdG~~ 142 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--LPLADYDLVVLANGVN 142 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--CCGGGCSEEEECCGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--cccccCCEEEECCCCC
Confidence 0 00 11235556667777777888888877632110 1124799999999984
No 129
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.26 E-value=7.1e-07 Score=92.82 Aligned_cols=41 Identities=32% Similarity=0.350 Sum_probs=36.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
..++|+|||||+||+++|..|++.| .+|+|||+.+..++..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G--~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAG--YKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCC--CcEEEEeccCCCCCcc
Confidence 3579999999999999999999999 9999999999887644
No 130
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.26 E-value=2.6e-06 Score=83.51 Aligned_cols=37 Identities=30% Similarity=0.415 Sum_probs=33.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
+..++|+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 39 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAG--VDVDVYERSPQ 39 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCC--CCEEEEecCCC
Confidence 35689999999999999999999999 99999999865
No 131
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.26 E-value=3.5e-06 Score=85.37 Aligned_cols=104 Identities=19% Similarity=0.182 Sum_probs=67.1
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc--------------ccCC---------------
Q 014990 14 ALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV--------------RSGV--------------- 64 (415)
Q Consensus 14 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~--------------~~~~--------------- 64 (415)
...+..++|+||||||+|+++|..|++.| .+|+|||+.+.++... ..++
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~G--~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~ 83 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLAG--VEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHF 83 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEE
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccc
Confidence 34557889999999999999999999999 9999999985432100 0000
Q ss_pred ---------CC-CCc-----chHHHHHHHHHHhhccCeEEEeceEece--------EEEeccc----ccccCEEEEccCC
Q 014990 65 ---------AP-DHP-----ETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSLSEL----RQLYHVVVLAYGA 117 (415)
Q Consensus 65 ---------~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~--------~v~~~~~----~~~~d~lvlAtG~ 117 (415)
.+ .++ ....+...+.+.+...+++++.++.+.. .++..+. ...+|+||.|.|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~ 163 (500)
T 2qa1_A 84 GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGG 163 (500)
T ss_dssp TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCT
T ss_pred cceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCc
Confidence 00 000 1123444566666667888888876522 2333332 3578999999998
Q ss_pred CC
Q 014990 118 ES 119 (415)
Q Consensus 118 ~~ 119 (415)
..
T Consensus 164 ~S 165 (500)
T 2qa1_A 164 RS 165 (500)
T ss_dssp TC
T ss_pred ch
Confidence 54
No 132
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.25 E-value=5.3e-07 Score=87.59 Aligned_cols=38 Identities=29% Similarity=0.343 Sum_probs=34.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
+++||+||||||||+++|..|++.| ++|+|||+.+.++
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G--~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCCCC
Confidence 3589999999999999999999999 9999999987654
No 133
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.23 E-value=5.9e-06 Score=87.03 Aligned_cols=38 Identities=18% Similarity=0.139 Sum_probs=34.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
..++|||||||.+|+++|..|+++| .+|+|||+.+.++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G--~~V~vlEk~~~~g 300 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRG--AVVTLYCADAQPA 300 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTT--CCEEEEESSSSTT
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC--CcEEEEeCCCccc
Confidence 4589999999999999999999999 9999999975443
No 134
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.23 E-value=2.5e-06 Score=86.68 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|+|||||+||+++|..|++.| .+|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G--~~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRG--HRVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCC--CCEEEEccCC
Confidence 4579999999999999999999999 9999999986
No 135
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.23 E-value=2.9e-06 Score=82.83 Aligned_cols=34 Identities=26% Similarity=0.486 Sum_probs=31.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
++|+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAG--IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT--CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCC
Confidence 68999999999999999999999 99999999763
No 136
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.22 E-value=4.6e-06 Score=81.71 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=33.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
+..++|+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNG--IDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTT--CEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCC
Confidence 35679999999999999999999999 99999999864
No 137
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.22 E-value=6.6e-06 Score=83.28 Aligned_cols=102 Identities=21% Similarity=0.245 Sum_probs=66.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc--------------ccCC-----------------
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV--------------RSGV----------------- 64 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~--------------~~~~----------------- 64 (415)
.+..++|+||||||+|+++|..|++.| .+|+|||+.+.+.... ..++
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G--~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 86 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGG--VDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGG 86 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETT
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecc
Confidence 446789999999999999999999999 9999999975432100 0000
Q ss_pred -------CC-CCc-----chHHHHHHHHHHhhccCeEEEeceEece--------EEEeccc----ccccCEEEEccCCCC
Q 014990 65 -------AP-DHP-----ETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSLSEL----RQLYHVVVLAYGAES 119 (415)
Q Consensus 65 -------~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~--------~v~~~~~----~~~~d~lvlAtG~~~ 119 (415)
.+ .++ ....+...+.+.+.+.+++++.++.+.. .++..+. ...+|+||.|.|...
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 87 RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred eecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 00 010 1224445566666677888888876522 2333332 357899999999854
No 138
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.21 E-value=6.6e-06 Score=78.19 Aligned_cols=41 Identities=29% Similarity=0.344 Sum_probs=35.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL 59 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~ 59 (415)
.++|+|||||++|+++|..|++.+++.+|+|+|+.+.+|+.
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg 105 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc
Confidence 34899999999999999999999333999999999887743
No 139
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.17 E-value=4.2e-06 Score=86.22 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|+|||||+||++||..|++.| .+|+|||+..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G--~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMG--AKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CCEEEEEecc
Confidence 4689999999999999999999999 9999999974
No 140
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.17 E-value=3.3e-06 Score=83.07 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc--CCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKA--HQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~--g~~~~v~lie~~~~ 55 (415)
.++|+|||||++|+++|..|++. | .+|+|||+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG--~~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPG--RSLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTT--SCEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCC--CeEEEEeCCCC
Confidence 47999999999999999999999 7 99999999754
No 141
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.17 E-value=8.8e-06 Score=81.08 Aligned_cols=93 Identities=25% Similarity=0.271 Sum_probs=69.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||++|+.+|..|++.+ .+|+++|+.+.+... ....++...+.+.+++.+++++.++.+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~~---------~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 216 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPLGV---------YLDKEFTDVLTEEMEANNITIATGETVER 216 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTTTT---------TCCHHHHHHHHHHHHTTTEEEEESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CeEEEEecCcccccc---------cCCHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 5789999999999999999999999 999999988754221 11245666777888888999988765421
Q ss_pred --------EEEecccccccCEEEEccCCCCCCC
Q 014990 98 --------SVSLSELRQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~~~~~~~d~lvlAtG~~~~~~ 122 (415)
.+..+.....+|.||+|+|. .|..
T Consensus 217 i~~~~~v~~v~~~~~~i~~d~vi~a~G~-~p~~ 248 (447)
T 1nhp_A 217 YEGDGRVQKVVTDKNAYDADLVVVAVGV-RPNT 248 (447)
T ss_dssp EECSSBCCEEEESSCEEECSEEEECSCE-EESC
T ss_pred EEccCcEEEEEECCCEEECCEEEECcCC-CCCh
Confidence 12333334579999999998 4443
No 142
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.17 E-value=7.1e-06 Score=84.71 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=34.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCCceEEEEcCCCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKA------HQEAQVDIIDRLPTPFG 58 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~------g~~~~v~lie~~~~~gg 58 (415)
.++|+|||||+||+++|..|++. | .+|+|||+.+.+++
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G--~~V~vlEk~~~~g~ 78 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKD--LRVCLVEKAAHIGA 78 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCC--CCEEEECSSSSTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCC--CcEEEEeCCCCCCC
Confidence 46899999999999999999998 7 99999999876543
No 143
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.16 E-value=1e-06 Score=89.06 Aligned_cols=41 Identities=22% Similarity=0.224 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
+|+|||||||.+||+||.+|++.| ++|+|+|+++.+||...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G--~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAG--IPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTT--CCEEEECCC-------C
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CcEEEEccCCCCCCcEE
Confidence 478999999999999999999999 99999999999998643
No 144
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.13 E-value=1.3e-06 Score=88.35 Aligned_cols=42 Identities=31% Similarity=0.437 Sum_probs=38.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCCceEEEEcCCCCCCCccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~v~lie~~~~~gg~~~ 61 (415)
..++|||||||++||+||.+|++. | .+|+|+|+++.+||...
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G--~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDG--PSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCC--SCEEEEESSSSCCGGGC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCC--CCEEEEECCCCCcCCee
Confidence 467999999999999999999985 7 99999999999999753
No 145
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.13 E-value=1.1e-05 Score=78.72 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=33.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-cCCCceEEEEcCCCC
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIIDRLPT 55 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~-~g~~~~v~lie~~~~ 55 (415)
.+..++|+|||||++|+++|..|++ .| ..+|+|||+.+.
T Consensus 18 ~~~~~dVvIIG~G~~Gl~~A~~La~~~G-~~~V~vlE~~~~ 57 (405)
T 2gag_B 18 PKKSYDAIIVGGGGHGLATAYFLAKNHG-ITNVAVLEKGWL 57 (405)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHHHC-CCCEEEECSSST
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHhcC-CCcEEEEeCCCC
Confidence 3456899999999999999999999 75 269999999874
No 146
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.12 E-value=9.4e-06 Score=83.58 Aligned_cols=40 Identities=33% Similarity=0.479 Sum_probs=36.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL 59 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~ 59 (415)
..++|+|||+|+||+++|..|++.| .+|+|+|+.+.+++.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g--~~v~~~e~~~~~~~~ 164 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAG--AKVILLEKEPIPGGN 164 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSS--CCEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CcEEEEecCCCCCcc
Confidence 4679999999999999999999999 999999999876653
No 147
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.12 E-value=8e-06 Score=81.52 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
.++|+|||||+||+++|..|++.| .+|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G--~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRG--LKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSS--CCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCC
Confidence 478999999999999999999999 99999999864
No 148
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=8.9e-06 Score=78.94 Aligned_cols=86 Identities=21% Similarity=0.175 Sum_probs=67.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece-
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 97 (415)
.++|+|||||+.|+.+|..|++.+ .+|+++++.+.+.. ...++...+.+.+++.+++++.++.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l~-----------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i 209 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAG--YHVKLIHRGAMFLG-----------LDEELSNMIKDMLEETGVKFFLNSELLEA 209 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTT--CEEEEECSSSCCTT-----------CCHHHHHHHHHHHHHTTEEEECSCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCCeecc-----------CCHHHHHHHHHHHHHCCCEEEcCCEEEEE
Confidence 378999999999999999999999 99999998876432 2235666777788888999998876532
Q ss_pred ---EEEecccccccCEEEEccCC
Q 014990 98 ---SVSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---~v~~~~~~~~~d~lvlAtG~ 117 (415)
.+..+++...+|.||+|+|.
T Consensus 210 ~~~~v~~~~g~i~~D~vi~a~G~ 232 (367)
T 1xhc_A 210 NEEGVLTNSGFIEGKVKICAIGI 232 (367)
T ss_dssp CSSEEEETTEEEECSCEEEECCE
T ss_pred EeeEEEECCCEEEcCEEEECcCC
Confidence 24444434679999999997
No 149
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.07 E-value=1.3e-05 Score=79.94 Aligned_cols=92 Identities=21% Similarity=0.192 Sum_probs=67.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||++|+.+|..|++.+ .+|+++++.+.+. |. ...++...+.+.+++.+++++.++.+..
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g--~~V~lv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~V~~ 233 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLG--AEVIVLEYMDRIL--------PT--MDLEVSRAAERVFKKQGLTIRTGVRVTA 233 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CEEEEEecCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEECCEEEE
Confidence 4589999999999999999999999 9999999887542 21 2235556667777778999988865522
Q ss_pred --------EEEeccc-ccccCEEEEccCCCCCCC
Q 014990 98 --------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~~~-~~~~d~lvlAtG~~~~~~ 122 (415)
.+...++ ...+|.||+|+|. .|..
T Consensus 234 i~~~~~~v~v~~~~g~~i~~D~vv~A~G~-~p~~ 266 (455)
T 2yqu_A 234 VVPEAKGARVELEGGEVLEADRVLVAVGR-RPYT 266 (455)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECSCE-EECC
T ss_pred EEEeCCEEEEEECCCeEEEcCEEEECcCC-CcCC
Confidence 1222233 3479999999998 4443
No 150
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.04 E-value=2.2e-05 Score=76.53 Aligned_cols=89 Identities=19% Similarity=0.132 Sum_probs=67.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+.. . ....++...+.+.+++.+++++.++.+..
T Consensus 144 ~~~~v~ViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~~~--------~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 212 (384)
T 2v3a_A 144 GKRRVLLLGAGLIGCEFANDLSSGG--YQLDVVAPCEQVMP--------G-LLHPAAAKAVQAGLEGLGVRFHLGPVLAS 212 (384)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSST--------T-TSCHHHHHHHHHHHHTTTCEEEESCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEecCcchhh--------c-ccCHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 3689999999999999999999999 99999998775422 1 11245566777778888999988865521
Q ss_pred --------EEEeccc-ccccCEEEEccCC
Q 014990 98 --------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
.+...++ ...+|.||+|+|.
T Consensus 213 i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 213 LKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred EEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 2333333 3479999999998
No 151
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.04 E-value=5.4e-06 Score=80.56 Aligned_cols=45 Identities=24% Similarity=0.385 Sum_probs=40.3
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC-CCCCCccc
Q 014990 15 LSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL-PTPFGLVR 61 (415)
Q Consensus 15 ~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~-~~~gg~~~ 61 (415)
++...++|+|||||++|+++|..|.+.| ++|+|+|+. +.+||.+.
T Consensus 40 ~~~~~~~V~IIGAGiaGL~aA~~L~~~G--~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 40 PPGPPKRILIVGAGIAGLVAGDLLTRAG--HDVTILEANANRVGGRIK 85 (376)
T ss_dssp SCCSCCEEEEECCBHHHHHHHHHHHHTS--CEEEEECSCSSCCBTTCC
T ss_pred CCCCCceEEEECCCHHHHHHHHHHHHCC--CcEEEEeccccccCCcee
Confidence 3456889999999999999999999999 999999999 88888643
No 152
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.04 E-value=2.1e-05 Score=78.78 Aligned_cols=92 Identities=21% Similarity=0.293 Sum_probs=68.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.+++++.++.+..
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~ 235 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLG--AEVTLIEYMPEIL--------PQ--GDPETAALLRRALEKEGIRVRTKTKAVG 235 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHhcCCEEEcCCEEEE
Confidence 3579999999999999999999999 9999999887542 21 2245566777778888999998876521
Q ss_pred --------EEEec-c--c---ccccCEEEEccCCCCCCC
Q 014990 98 --------SVSLS-E--L---RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~-~--~---~~~~d~lvlAtG~~~~~~ 122 (415)
.+... + + ...+|.||+|+|. .|..
T Consensus 236 i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~-~p~~ 273 (464)
T 2eq6_A 236 YEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR-KPRT 273 (464)
T ss_dssp EEEETTEEEEEEEETTCCSCEEEEESEEEECSCE-EESC
T ss_pred EEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc-ccCC
Confidence 13332 3 3 3479999999998 4443
No 153
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.03 E-value=1.5e-05 Score=82.28 Aligned_cols=36 Identities=28% Similarity=0.235 Sum_probs=32.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...++|+|||||+||++||..|++.| .+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G--~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGG--LHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCC--CcEEEEEecc
Confidence 35689999999999999999999999 9999999874
No 154
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.00 E-value=5.1e-06 Score=81.95 Aligned_cols=40 Identities=18% Similarity=0.313 Sum_probs=37.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
++|+|||||++|+++|.+|++.| .+|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNG--HEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCCCceeE
Confidence 58999999999999999999999 99999999999888653
No 155
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.98 E-value=2.4e-05 Score=78.27 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=67.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||++|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.+++++.++.+..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 237 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLG--AQVSVVEARERIL--------PT--YDSELTAPVAESLKKLGIALHLGHSVEG 237 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEETTCEEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEECCEEEE
Confidence 4689999999999999999999999 9999999987643 21 1234556667777778999988866522
Q ss_pred E----EEec--cc---ccccCEEEEccCCCCCCC
Q 014990 98 S----VSLS--EL---RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 ~----v~~~--~~---~~~~d~lvlAtG~~~~~~ 122 (415)
- +... ++ ...+|.||+|+|. .|..
T Consensus 238 i~~~~v~v~~~~G~~~~i~~D~vv~a~G~-~p~~ 270 (458)
T 1lvl_A 238 YENGCLLANDGKGGQLRLEADRVLVAVGR-RPRT 270 (458)
T ss_dssp EETTEEEEECSSSCCCEECCSCEEECCCE-EECC
T ss_pred EEeCCEEEEECCCceEEEECCEEEECcCC-CcCC
Confidence 1 2222 23 3479999999998 4444
No 156
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.98 E-value=3.9e-05 Score=75.50 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=67.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+.. . ....++...+.+.+++.+++++.++.+..
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 212 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAG--VHVSLVETQPRLMS--------R-AAPATLADFVARYHAAQGVDLRFERSVTG 212 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSST--------T-TSCHHHHHHHHHHHHHTTCEEEESCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CEEEEEEeCCcccc--------c-ccCHHHHHHHHHHHHHcCcEEEeCCEEEE
Confidence 4789999999999999999999999 99999998875421 1 12234566677778888999998866532
Q ss_pred ----EEEeccc-ccccCEEEEccCC
Q 014990 98 ----SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ----~v~~~~~-~~~~d~lvlAtG~ 117 (415)
.+...++ ...+|.||+|+|.
T Consensus 213 i~~~~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 213 SVDGVVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp EETTEEEETTSCEEECSEEEECSCE
T ss_pred EECCEEEECCCCEEEcCEEEECcCC
Confidence 2444444 3479999999998
No 157
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.98 E-value=5.7e-06 Score=81.50 Aligned_cols=40 Identities=30% Similarity=0.577 Sum_probs=37.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
|+|+|||||.+|++||.+|++.| .+|+|+|+.+.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG--HEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CceEEEeCCCCCCCcee
Confidence 58999999999999999999999 99999999999887653
No 158
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.96 E-value=8.2e-06 Score=82.14 Aligned_cols=43 Identities=33% Similarity=0.460 Sum_probs=39.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
.+..++|+|||||+|||+||..|++.| .+|+|+|+.+.+||..
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g--~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAG--YKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeccCCCCCce
Confidence 346789999999999999999999999 9999999999998864
No 159
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.96 E-value=3.8e-05 Score=77.40 Aligned_cols=90 Identities=20% Similarity=0.188 Sum_probs=67.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++|+|||||+.|+.+|..|++.+ .+|+|+++.+.+. +. ....++...+.+.+++.+++++.++.+.
T Consensus 192 ~~~~~vvVIGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 260 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVELAEAFQRKG--KEVVLIDVVDTCL--------AG-YYDRDLTDLMAKNMEEHGIQLAFGETVK 260 (490)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHTTTCEEEETCCEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCC--CeEEEEEcccchh--------hh-HHHHHHHHHHHHHHHhCCeEEEeCCEEE
Confidence 45789999999999999999999999 9999999887542 11 1223566677778888899998886552
Q ss_pred e--------EEEecccccccCEEEEccCC
Q 014990 97 S--------SVSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~--------~v~~~~~~~~~d~lvlAtG~ 117 (415)
. .+..+.....+|.||+|+|.
T Consensus 261 ~i~~~~~v~~v~~~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 261 EVAGNGKVEKIITDKNEYDVDMVILAVGF 289 (490)
T ss_dssp EEECSSSCCEEEESSCEEECSEEEECCCE
T ss_pred EEEcCCcEEEEEECCcEEECCEEEECCCC
Confidence 2 12222233579999999998
No 160
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.95 E-value=5.2e-06 Score=82.79 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=38.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcC----CCceEEEEcCCCCCCCccc
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAH----QEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g----~~~~v~lie~~~~~gg~~~ 61 (415)
+++|+|||||++|++||.+|++.| |+.+|+|+|+.+.+||...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~ 51 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQ 51 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEE
Confidence 579999999999999999999997 6689999999998887543
No 161
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.94 E-value=7.5e-06 Score=79.94 Aligned_cols=36 Identities=25% Similarity=0.358 Sum_probs=33.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
.++|+||||||||+++|..|++.| ++|+|||+.+.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G--~~v~v~Er~~~~ 36 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHG--IKVTIYERNSAA 36 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CCEEEEecCCCC
Confidence 378999999999999999999999 999999997654
No 162
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.94 E-value=7.7e-06 Score=81.74 Aligned_cols=43 Identities=19% Similarity=0.081 Sum_probs=39.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
+..++|+|||||.+|+++|..|++.| .+|+|+|+++.+||...
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDG--KKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCCCCCcccc
Confidence 35689999999999999999999999 99999999999999754
No 163
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.94 E-value=4.4e-05 Score=76.13 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=67.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.+++++.++.+..
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 236 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFG--TKVTILEGAGEIL--------SG--FEKQMAAIIKKRLKKKGVEVVTNALAKG 236 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEEESEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4689999999999999999999999 9999999887542 21 2235566677778888999988876522
Q ss_pred --------EEEec---c-cccccCEEEEccCCCCCCC
Q 014990 98 --------SVSLS---E-LRQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~---~-~~~~~d~lvlAtG~~~~~~ 122 (415)
.++.. + ....+|.||+|+|. .|..
T Consensus 237 i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~-~p~~ 272 (455)
T 1ebd_A 237 AEEREDGVTVTYEANGETKTIDADYVLVTVGR-RPNT 272 (455)
T ss_dssp EEEETTEEEEEEEETTEEEEEEESEEEECSCE-EESC
T ss_pred EEEeCCeEEEEEEeCCceeEEEcCEEEECcCC-Cccc
Confidence 12221 2 23479999999998 4443
No 164
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.94 E-value=7.2e-06 Score=82.15 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=37.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCc--eEEEEcCCCCCCCccc
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRLPTPFGLVR 61 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~--~v~lie~~~~~gg~~~ 61 (415)
+++|+|||||.+||++|.+|++.| . +|+|+|+.+.+||...
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G--~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAP--CPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSS--SCCEEEEECSSSSSBTTCC
T ss_pred CceEEEECCcHHHHHHHHHHHhCC--CCCcEEEEeCCCCCCCceE
Confidence 368999999999999999999999 7 9999999999988763
No 165
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.94 E-value=2.2e-05 Score=78.06 Aligned_cols=88 Identities=13% Similarity=0.146 Sum_probs=67.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
+.++|+|||||+.|+.+|..+++.+ .+|+|+++.+.+. +.. ..+....+.+.+++.+++++.+..+..
T Consensus 146 ~~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~ll--------~~~--d~~~~~~~~~~l~~~gV~i~~~~~v~~ 213 (437)
T 4eqs_A 146 QVDKVLVVGAGYVSLEVLENLYERG--LHPTLIHRSDKIN--------KLM--DADMNQPILDELDKREIPYRLNEEINA 213 (437)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSCCS--------TTS--CGGGGHHHHHHHHHTTCCEEESCCEEE
T ss_pred CCcEEEEECCccchhhhHHHHHhcC--Ccceeeeeecccc--------ccc--cchhHHHHHHHhhccceEEEeccEEEE
Confidence 4678999999999999999999999 9999999887642 111 123445666777888999998877632
Q ss_pred ----EEEecccc-cccCEEEEccCC
Q 014990 98 ----SVSLSELR-QLYHVVVLAYGA 117 (415)
Q Consensus 98 ----~v~~~~~~-~~~d~lvlAtG~ 117 (415)
.+..++++ ..+|.|++|+|.
T Consensus 214 ~~~~~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 214 INGNEITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp EETTEEEETTSCEEECSEEEECCCE
T ss_pred ecCCeeeecCCeEEeeeeEEEEece
Confidence 34455544 479999999997
No 166
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.94 E-value=2.5e-05 Score=78.60 Aligned_cols=88 Identities=15% Similarity=0.152 Sum_probs=66.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+.. . ...++...+.+.+++.+++++.++.+..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~--------~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 252 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELG--KKVRMIERNDHIGT--------I--YDGDMAEYIYKEADKHHIEILTNENVKA 252 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTT--CEEEEECCGGGTTS--------S--SCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--CeEEEEEeCCchhh--------c--CCHHHHHHHHHHHHHcCcEEEcCCEEEE
Confidence 5689999999999999999999999 99999998875432 1 1235566777778888999988765522
Q ss_pred --------EEEecccccccCEEEEccCC
Q 014990 98 --------SVSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~~~~~~d~lvlAtG~ 117 (415)
.+..+.....+|.||+|+|.
T Consensus 253 i~~~~~v~~v~~~~~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 253 FKGNERVEAVETDKGTYKADLVLVSVGV 280 (480)
T ss_dssp EEESSBEEEEEETTEEEECSEEEECSCE
T ss_pred EEcCCcEEEEEECCCEEEcCEEEECcCC
Confidence 12233334579999999998
No 167
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.93 E-value=6.5e-06 Score=81.34 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=36.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
++|+|||||++|+++|..|++.| .+|+|+|+.+.+||..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G--~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAG--KKVLLLEGGERLGGRA 40 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSSSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcC--CeEEEEecCCCccCee
Confidence 68999999999999999999999 9999999998888764
No 168
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.93 E-value=3.7e-05 Score=82.65 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~ 55 (415)
..++|+|||||++|+++|.+|++.| . +|+|||+...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G--~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRG--WNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT--CCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCC--CCcEEEEeCCCC
Confidence 4679999999999999999999999 8 9999999875
No 169
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.92 E-value=3.3e-05 Score=78.73 Aligned_cols=94 Identities=16% Similarity=0.143 Sum_probs=68.8
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 15 LSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 15 ~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
....+++++|||||+.|+.+|..+++.| .+|+|+++...+ |. ...++...+.+.++..++.+..+..
T Consensus 219 l~~lP~~lvIIGgG~IGlE~A~~~~~lG--~~VTii~~~~~L---------~~--~D~ei~~~l~~~l~~~gi~~~~~~~ 285 (542)
T 4b1b_A 219 LKKDPGKTLVVGASYVALECSGFLNSLG--YDVTVAVRSIVL---------RG--FDQQCAVKVKLYMEEQGVMFKNGIL 285 (542)
T ss_dssp CSSCCCSEEEECCSHHHHHHHHHHHHHT--CCEEEEESSCSS---------TT--SCHHHHHHHHHHHHHTTCEEEETCC
T ss_pred cccCCceEEEECCCHHHHHHHHHHHhcC--CeEEEecccccc---------cc--cchhHHHHHHHHHHhhcceeecceE
Confidence 3345788999999999999999999999 999999864321 32 2346677788888888999988876
Q ss_pred eceE--------EEeccc-ccccCEEEEccCCCCCCC
Q 014990 95 LGSS--------VSLSEL-RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 95 v~~~--------v~~~~~-~~~~d~lvlAtG~~~~~~ 122 (415)
+... +...+. ...+|.|++|+|. .|+.
T Consensus 286 v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR-~Pnt 321 (542)
T 4b1b_A 286 PKKLTKMDDKILVEFSDKTSELYDTVLYAIGR-KGDI 321 (542)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECSCE-EESC
T ss_pred EEEEEecCCeEEEEEcCCCeEEEEEEEEcccc-cCCc
Confidence 5321 222222 2368999999997 4443
No 170
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.92 E-value=1.9e-05 Score=77.10 Aligned_cols=84 Identities=13% Similarity=0.060 Sum_probs=65.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEeceE
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGSS 98 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 98 (415)
.++|+|||||+.|+.+|..|++.+ .+|+++++.+.+... ....+....+.+.+++.+++++.+..+..-
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g--~~Vtvv~~~~~~l~~---------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 214 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSG--TPASIGIILEYPLER---------QLDRDGGLFLKDKLDRLGIKIYTNSNFEEM 214 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHT--CCEEEECSSSSSCTT---------TSCHHHHHHHHHHHHTTTCEEECSCCGGGC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--CeEEEEEcCCccchh---------hcCHHHHHHHHHHHHhCCCEEEeCCEEEEc
Confidence 578999999999999999999999 999999988764211 112345666777788889999988776432
Q ss_pred EEecccccccCEEEEccCC
Q 014990 99 VSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 99 v~~~~~~~~~d~lvlAtG~ 117 (415)
.....+|.||+|+|.
T Consensus 215 ----g~~~~~D~vv~a~G~ 229 (385)
T 3klj_A 215 ----GDLIRSSCVITAVGV 229 (385)
T ss_dssp ----HHHHHHSEEEECCCE
T ss_pred ----CeEEecCeEEECcCc
Confidence 234579999999998
No 171
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.92 E-value=7.2e-06 Score=82.20 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=37.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
....++|+|||||++|+++|..|++.| .+|+|+|+.+.+||...
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g--~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRG--TDAVLLESSARLGGAVG 56 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTT--CCEEEECSSSSSBTTCC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEEcCCCCCceee
Confidence 346789999999999999999999999 99999999999998653
No 172
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.90 E-value=4.5e-05 Score=76.35 Aligned_cols=92 Identities=12% Similarity=0.166 Sum_probs=68.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 232 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFG--SEVTVVALEDRLL--------FQ--FDPLLSATLAENMHAQGIETHLEFAVAA 232 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEESSCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4679999999999999999999999 9999999887542 11 1234556667777888999988865421
Q ss_pred --------EEEecccc--cccCEEEEccCCCCCCC
Q 014990 98 --------SVSLSELR--QLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~~~~--~~~d~lvlAtG~~~~~~ 122 (415)
.+...++. ..+|.||+|+|. .|..
T Consensus 233 i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~-~p~~ 266 (463)
T 2r9z_A 233 LERDAQGTTLVAQDGTRLEGFDSVIWAVGR-APNT 266 (463)
T ss_dssp EEEETTEEEEEETTCCEEEEESEEEECSCE-EESC
T ss_pred EEEeCCeEEEEEeCCcEEEEcCEEEECCCC-CcCC
Confidence 23444444 589999999998 4443
No 173
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.90 E-value=8.7e-06 Score=82.71 Aligned_cols=42 Identities=24% Similarity=0.234 Sum_probs=38.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
..++|+|||||+||++||..|++.| .+|+|+|+++.+||...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G--~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSG--LNVVVLEARDRVGGRTY 44 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSSSBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCCCCCcee
Confidence 3578999999999999999999999 99999999999988753
No 174
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.88 E-value=1.3e-05 Score=78.92 Aligned_cols=44 Identities=25% Similarity=0.359 Sum_probs=38.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
+..++|+|||||++|++||..|++.|+ .+|+|+|+.+.+||...
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~-~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGF-HDYTILERTDHVGGKCH 47 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEECSSSCSSTTCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCC-CcEEEEECCCCCCCccc
Confidence 356899999999999999999999862 69999999999988653
No 175
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.87 E-value=4.4e-05 Score=76.81 Aligned_cols=88 Identities=14% Similarity=0.221 Sum_probs=67.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.+++++.++.+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~ 251 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLG--SRLDVVEMMDGLM--------QG--ADRDLVKVWQKQNEYRFDNIMVNTKTVA 251 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHGGGEEEEECSCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEECCccc--------cc--cCHHHHHHHHHHHHhcCCEEEECCEEEE
Confidence 4689999999999999999999999 9999999887642 21 2345666777788888999998876522
Q ss_pred --------EEEecc----c-ccccCEEEEccCC
Q 014990 98 --------SVSLSE----L-RQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~----~-~~~~d~lvlAtG~ 117 (415)
.+...+ + ...+|.||+|+|.
T Consensus 252 i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp EEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred EEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 133332 2 2479999999998
No 176
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.87 E-value=1.3e-05 Score=80.17 Aligned_cols=43 Identities=21% Similarity=0.306 Sum_probs=39.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
.+++|+|||||++|+++|.+|++.|++.+|+|+|+.+.+||..
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTC
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCcee
Confidence 3579999999999999999999998779999999999888753
No 177
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.87 E-value=1.2e-05 Score=78.84 Aligned_cols=42 Identities=29% Similarity=0.354 Sum_probs=38.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCCceEEEEcCCCCCCCccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~v~lie~~~~~gg~~~ 61 (415)
..++|+|||||++|+++|..|++. | .+|+|+|+.+.+||...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g--~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLD--KRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSC--CCEEEECSSSSSSGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCC--CCEEEEeCCCCCCCeee
Confidence 468999999999999999999999 8 99999999999888754
No 178
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.87 E-value=5.9e-05 Score=75.71 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=68.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+... ...++...+.+.+++.+++++.++.+..
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~~----------~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 249 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYSRLG--SKVTVVEFQPQIGAS----------MDGEVAKATQKFLKKQGLDFKLSTKVIS 249 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSSSS----------SCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcC--CEEEEEEeCCccccc----------cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4689999999999999999999999 999999988764321 1245666777788888999988865522
Q ss_pred ----------EEEec-----c-cccccCEEEEccCCCCCCC
Q 014990 98 ----------SVSLS-----E-LRQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 ----------~v~~~-----~-~~~~~d~lvlAtG~~~~~~ 122 (415)
.+... + ....+|.||+|+|. .|..
T Consensus 250 i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~-~p~~ 289 (478)
T 1v59_A 250 AKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR-RPYI 289 (478)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE-EECC
T ss_pred EEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC-CcCC
Confidence 12222 1 23479999999998 4443
No 179
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.86 E-value=0.00011 Score=73.22 Aligned_cols=93 Identities=18% Similarity=0.260 Sum_probs=69.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ....++...+.+.+++.+++++.++.+..
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 214 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMK--KTVHVFESLENLL--------PK-YFDKEMVAEVQKSLEKQAVIFHFEETVLG 214 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TT-TCCHHHHHHHHHHHHTTTEEEEETCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEEccCccc--------cc-cCCHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 4688999999999999999999999 9999999887542 11 12245667778888888999998866522
Q ss_pred --------EEEecccccccCEEEEccCCCCCCC
Q 014990 98 --------SVSLSELRQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~~~~~~~d~lvlAtG~~~~~~ 122 (415)
.+..++....+|.||+|+|. .|..
T Consensus 215 i~~~~~~v~v~~~~g~i~aD~Vv~A~G~-~p~~ 246 (452)
T 3oc4_A 215 IEETANGIVLETSEQEISCDSGIFALNL-HPQL 246 (452)
T ss_dssp EEECSSCEEEEESSCEEEESEEEECSCC-BCCC
T ss_pred EEccCCeEEEEECCCEEEeCEEEECcCC-CCCh
Confidence 13333344579999999998 4433
No 180
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.85 E-value=8.3e-06 Score=81.15 Aligned_cols=41 Identities=29% Similarity=0.350 Sum_probs=37.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
..++|+|||||++|++||..|++.| .+|+|+|+++.+||..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAG--LSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CcEEEEECCCCCCCce
Confidence 3578999999999999999999998 9999999999998875
No 181
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.85 E-value=8.6e-05 Score=73.05 Aligned_cols=88 Identities=14% Similarity=0.219 Sum_probs=67.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece-
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 97 (415)
.++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+.. . ....++...+.+.+++.+++++.++.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g--~~Vtvv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFG--VNVTLLEALPRVLA--------R-VAGEALSEFYQAEHRAHGVDLRTGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTTT--------T-TSCHHHHHHHHHHHHHTTCEEEETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcC--CeEEEEecCCchhh--------h-hcCHHHHHHHHHHHHhCCCEEEECCEEEEE
Confidence 689999999999999999999999 99999998876421 1 12245666777778888999998866522
Q ss_pred --------EEEecccc-cccCEEEEccCC
Q 014990 98 --------SVSLSELR-QLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~~~-~~~d~lvlAtG~ 117 (415)
.+.+.++. ..+|.||+|+|.
T Consensus 221 ~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 221 EGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp EESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred EecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 23333443 479999999998
No 182
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.85 E-value=7e-05 Score=74.95 Aligned_cols=87 Identities=15% Similarity=0.181 Sum_probs=66.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+. | ...++...+.+.+++.+++++.++.+..
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~---~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 241 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLG--SKVTVLARNTLFF--------R---EDPAIGEAVTAAFRAEGIEVLEHTQASQ 241 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTT--------T---SCHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEEECCccC--------C---CCHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 4689999999999999999999999 9999999877542 2 1235666777778888999988765522
Q ss_pred --------EEEecccccccCEEEEccCC
Q 014990 98 --------SVSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~~~~~~d~lvlAtG~ 117 (415)
.+..+.....+|.||+|+|.
T Consensus 242 i~~~~~~~~v~~~~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 242 VAHMDGEFVLTTTHGELRADKLLVATGR 269 (467)
T ss_dssp EEEETTEEEEEETTEEEEESEEEECSCE
T ss_pred EEEeCCEEEEEECCcEEEcCEEEECCCC
Confidence 12333334579999999998
No 183
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.83 E-value=4.4e-05 Score=75.12 Aligned_cols=90 Identities=16% Similarity=0.096 Sum_probs=67.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+... ....++...+.+.+++.+++++.++.+.
T Consensus 141 ~~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtvv~~~~~~l~~---------~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 209 (410)
T 3ef6_A 141 TSATRLLIVGGGLIGCEVATTARKLG--LSVTILEAGDELLVR---------VLGRRIGAWLRGLLTELGVQVELGTGVV 209 (410)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSSHH---------HHCHHHHHHHHHHHHHHTCEEECSCCEE
T ss_pred ccCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCccchh---------hcCHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 35789999999999999999999999 999999987754211 0123456667777888899999877652
Q ss_pred e--------EEEecccc-cccCEEEEccCC
Q 014990 97 S--------SVSLSELR-QLYHVVVLAYGA 117 (415)
Q Consensus 97 ~--------~v~~~~~~-~~~d~lvlAtG~ 117 (415)
. .+...++. ..+|.||+|+|.
T Consensus 210 ~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 210 GFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp EEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred EEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 2 24444443 479999999998
No 184
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.83 E-value=1.6e-05 Score=77.83 Aligned_cols=43 Identities=33% Similarity=0.340 Sum_probs=39.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
...++|+|||||++|+++|..|++.| .+|+|+|+.+.+||...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g--~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSG--QRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCC--CceEEEeccCCCCCccc
Confidence 35789999999999999999999998 99999999999888754
No 185
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.81 E-value=6.8e-05 Score=74.71 Aligned_cols=92 Identities=18% Similarity=0.269 Sum_probs=68.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+|+++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 233 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLG--AKTHLFEMFDAPL--------PS--FDPMISETLVEVMNAEGPQLHTNAIPKA 233 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHSCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcC--CEEEEEEeCCchh--------hh--hhHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4679999999999999999999999 9999999887542 21 1234566677777788999988865421
Q ss_pred ---------EEEeccc-ccccCEEEEccCCCCCCC
Q 014990 98 ---------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 ---------~v~~~~~-~~~~d~lvlAtG~~~~~~ 122 (415)
.+...++ ...+|.||+|+|. .|..
T Consensus 234 i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~-~p~~ 267 (450)
T 1ges_A 234 VVKNTDGSLTLELEDGRSETVDCLIWAIGR-EPAN 267 (450)
T ss_dssp EEECTTSCEEEEETTSCEEEESEEEECSCE-EESC
T ss_pred EEEeCCcEEEEEECCCcEEEcCEEEECCCC-CcCC
Confidence 2333333 3479999999998 4443
No 186
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.81 E-value=9e-05 Score=72.69 Aligned_cols=89 Identities=20% Similarity=0.211 Sum_probs=67.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+... ....++...+.+.+++.+++++.++.+..
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtvv~~~~~~~~~---------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 209 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKG--LEVDVVELAPRVMAR---------VVTPEISSYFHDRHSGAGIRMHYGVRATE 209 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSTTTT---------TSCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCCcchhh---------ccCHHHHHHHHHHHHhCCcEEEECCEEEE
Confidence 4678999999999999999999999 999999988754211 12235666777788888999998865521
Q ss_pred ---------EEEecccc-cccCEEEEccCC
Q 014990 98 ---------SVSLSELR-QLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~~~~-~~~d~lvlAtG~ 117 (415)
.+...++. ..+|.||+|+|.
T Consensus 210 i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 210 IAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp EEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred EEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 23344443 479999999998
No 187
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.79 E-value=0.0001 Score=73.83 Aligned_cols=89 Identities=20% Similarity=0.269 Sum_probs=66.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+... . ...++...+.+.+++.+++++.++.+..
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l~~-------~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 245 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLG--ADVTAVEFLGHVGGV-------G--IDMEISKNFQRILQKQGFKFKLNTKVTG 245 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSSCS-------S--CCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcC--CEEEEEeccCccCCc-------c--cCHHHHHHHHHHHHHCCCEEEeCceEEE
Confidence 4589999999999999999999999 999999988754210 1 2235566777788888999998876522
Q ss_pred ---------EEEe-----cc-cccccCEEEEccCC
Q 014990 98 ---------SVSL-----SE-LRQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~-----~~-~~~~~d~lvlAtG~ 117 (415)
.++. .+ ....+|.||+|+|.
T Consensus 246 i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 246 ATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp EEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred EEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 1221 12 23478999999998
No 188
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.79 E-value=2e-05 Score=79.60 Aligned_cols=41 Identities=24% Similarity=0.296 Sum_probs=37.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
..++|+|||||++|+++|..|++.| .+|+|+|+.+.+||..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHG--LNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTS--CEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEEeCCCCCCce
Confidence 4689999999999999999999999 9999999999999864
No 189
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.78 E-value=1.6e-05 Score=80.12 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=37.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
++|+|||||+||++||..|.+.| .+|+|+|+.+.+||..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g--~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAG--FKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--CCEEEEeCCCCCCCcc
Confidence 79999999999999999999999 9999999999999864
No 190
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.78 E-value=8.7e-05 Score=74.58 Aligned_cols=92 Identities=14% Similarity=0.141 Sum_probs=68.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~Gv~i~~~~~v~~ 251 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLG--SETHLVIRGETVL--------RK--FDECIQNTITDHYVKEGINVHKLSKIVK 251 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CceEEEEeCCccc--------cc--cCHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 5689999999999999999999999 9999999887642 21 2235566677777788999988865421
Q ss_pred ----------EEEeccc--ccccCEEEEccCCCCCCC
Q 014990 98 ----------SVSLSEL--RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 ----------~v~~~~~--~~~~d~lvlAtG~~~~~~ 122 (415)
.+...++ ...+|.||+|+|. .|..
T Consensus 252 i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~-~p~~ 287 (479)
T 2hqm_A 252 VEKNVETDKLKIHMNDSKSIDDVDELIWTIGR-KSHL 287 (479)
T ss_dssp EEECC-CCCEEEEETTSCEEEEESEEEECSCE-EECC
T ss_pred EEEcCCCcEEEEEECCCcEEEEcCEEEECCCC-CCcc
Confidence 2334444 3579999999998 4443
No 191
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.78 E-value=2.3e-05 Score=79.02 Aligned_cols=43 Identities=37% Similarity=0.475 Sum_probs=39.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
....++|+|||||++|+++|..|++.| .+|+|+|+.+.+||..
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g--~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAG--HQVTVLEASERPGGRV 72 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHT--CEEEEECSSSSSBTTC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCC--CeEEEEECCCCCCCce
Confidence 345789999999999999999999999 9999999999998865
No 192
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.77 E-value=0.00012 Score=73.70 Aligned_cols=93 Identities=20% Similarity=0.227 Sum_probs=68.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+.
T Consensus 196 ~~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~gV~v~~~~~v~ 263 (491)
T 3urh_A 196 KVPASMIVVGGGVIGLELGSVWARLG--AKVTVVEFLDTIL--------GG--MDGEVAKQLQRMLTKQGIDFKLGAKVT 263 (491)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------SS--SCHHHHHHHHHHHHHTTCEEECSEEEE
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcC--CEEEEEecccccc--------cc--CCHHHHHHHHHHHHhCCCEEEECCeEE
Confidence 35689999999999999999999999 9999999887642 11 224566677777888899998887652
Q ss_pred e--------EEEecc---c---ccccCEEEEccCCCCCCC
Q 014990 97 S--------SVSLSE---L---RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 97 ~--------~v~~~~---~---~~~~d~lvlAtG~~~~~~ 122 (415)
. .+...+ + ...+|.||+|+|. .|..
T Consensus 264 ~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~-~p~~ 302 (491)
T 3urh_A 264 GAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR-KPST 302 (491)
T ss_dssp EEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC-EECC
T ss_pred EEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC-ccCC
Confidence 2 122221 2 3479999999997 4443
No 193
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.77 E-value=0.00011 Score=74.74 Aligned_cols=86 Identities=10% Similarity=-0.020 Sum_probs=66.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece--
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS-- 97 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 97 (415)
++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATG--RRTVMLVRTEPLK--------LI--KDNETRAYVLDRMKEQGMEIISGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTT--------TC--CSHHHHHHHHHHHHHTTCEEESSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcC--CeEEEEEecCccc--------cc--ccHHHHHHHHHHHHhCCcEEEECCEEEEEE
Confidence 89999999999999999999999 9999999887532 21 2345666777788888999988866521
Q ss_pred ----------EEEeccc--ccccCEEEEccCC
Q 014990 98 ----------SVSLSEL--RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ----------~v~~~~~--~~~~d~lvlAtG~ 117 (415)
.+...++ ...+|.||+|+|.
T Consensus 283 ~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 283 EDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp ECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred EcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 2333344 3579999999998
No 194
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.76 E-value=2.5e-05 Score=77.38 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=36.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCCCCCc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGL 59 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~~gg~ 59 (415)
..++|||||||++|+++|.+|++.| . +|+|+|+.+..++.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G--~~~V~vlE~~~~~~~~ 45 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRG--YTNVTVLDPYPVPSAI 45 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTT--CCCEEEEESSCSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcC--CCcEEEEeCCCCCCCC
Confidence 4679999999999999999999999 8 99999999876543
No 195
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.75 E-value=1.6e-05 Score=80.64 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=37.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
..++|+|||||+|||+||..|.+.| ..+|+|+|+.+.+||..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G-~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNG-IQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTT-CCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcC-CCCEEEEeCCCCCCCce
Confidence 4579999999999999999999986 37999999999999864
No 196
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.74 E-value=2.8e-05 Score=75.90 Aligned_cols=41 Identities=24% Similarity=0.264 Sum_probs=37.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
.++|+|||||++|+++|..|.+.| .+|+|+|+.+.+||...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g--~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKG--HQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CcEEEEEecCCcCCccc
Confidence 479999999999999999999998 99999999999888653
No 197
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.74 E-value=0.00014 Score=73.43 Aligned_cols=91 Identities=18% Similarity=0.179 Sum_probs=68.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece-
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 97 (415)
.++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~gv~i~~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLG--IDSYIFARGNRIL--------RK--FDESVINVLENDMKKNNINIVTFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcC--CeEEEEecCCccC--------cc--cchhhHHHHHHHHHhCCCEEEECCEEEEE
Confidence 689999999999999999999999 9999999877642 21 1235566777778888999988865421
Q ss_pred --------EEEecccc--cccCEEEEccCCCCCCC
Q 014990 98 --------SVSLSELR--QLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~~~~--~~~d~lvlAtG~~~~~~ 122 (415)
.+...++. ..+|.||+|+|. .|..
T Consensus 244 ~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~-~p~~ 277 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGRIYEHFDHVIYCVGR-SPDT 277 (500)
T ss_dssp EESSTTCEEEEETTSCEEEEESEEEECCCB-CCTT
T ss_pred EEcCCceEEEEECCCcEEEECCEEEECCCC-CcCC
Confidence 23333333 579999999998 4443
No 198
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.73 E-value=0.00013 Score=72.96 Aligned_cols=92 Identities=17% Similarity=0.260 Sum_probs=67.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|.+.+ .+|+|+++.+.+. |. ...++...+.+.+++.+++++.++.+..
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 237 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYG--VDVTIVEFLPRAL--------PN--EDADVSKEIEKQFKKLGVTILTATKVES 237 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEECSCEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHcCCEEEeCcEEEE
Confidence 4689999999999999999999999 9999999887542 21 2235566677778888999988876522
Q ss_pred --------EEEec-cc---ccccCEEEEccCCCCCCC
Q 014990 98 --------SVSLS-EL---RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 98 --------~v~~~-~~---~~~~d~lvlAtG~~~~~~ 122 (415)
.+... ++ ...+|.||+|+|. .|..
T Consensus 238 i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~-~p~~ 273 (464)
T 2a8x_A 238 IADGGSQVTVTVTKDGVAQELKAEKVLQAIGF-APNV 273 (464)
T ss_dssp EEECSSCEEEEEESSSCEEEEEESEEEECSCE-EECC
T ss_pred EEEcCCeEEEEEEcCCceEEEEcCEEEECCCC-CccC
Confidence 12222 22 3479999999998 4443
No 199
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.72 E-value=0.00015 Score=72.52 Aligned_cols=88 Identities=17% Similarity=0.276 Sum_probs=65.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHh-hccCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVV-QHERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~ 96 (415)
..++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+ ++.+++++.++.+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~~gv~i~~~~~v~ 240 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLG--AEVTVVEFAPRCA--------PT--LDEDVTNALVGALAKNEKMKFMTSTKVV 240 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCCEEECSCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhC--CEEEEEecCCccc--------cc--CCHHHHHHHHHHHhhcCCcEEEeCCEEE
Confidence 4689999999999999999999999 9999999887542 21 2235566777777 78899998886652
Q ss_pred e--------EEEec--cc---ccccCEEEEccCC
Q 014990 97 S--------SVSLS--EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~--------~v~~~--~~---~~~~d~lvlAtG~ 117 (415)
. .+... ++ ...+|.||+|+|.
T Consensus 241 ~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 241 GGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp EEEECSSSEEEEEECC---EEEEEESEEEECSCE
T ss_pred EEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc
Confidence 1 12322 22 3479999999998
No 200
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.72 E-value=0.00012 Score=72.93 Aligned_cols=89 Identities=15% Similarity=0.141 Sum_probs=66.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ....++...+.+.+++.+++++.++.+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 216 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQN--YNVNLIDGHERVL--------YK-YFDKEFTDILAKDYEAHGVNLVLGSKVAA 216 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHHTTCEEEESSCEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcC--CEEEEEEcCCchh--------hh-hhhhhHHHHHHHHHHHCCCEEEcCCeeEE
Confidence 4678999999999999999999998 9999999877542 11 12235666777788888999988875522
Q ss_pred E---------EEecccccccCEEEEccCC
Q 014990 98 S---------VSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 98 ~---------v~~~~~~~~~d~lvlAtG~ 117 (415)
- +..+.....+|.||+|+|.
T Consensus 217 i~~~~~~v~~v~~~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 217 FEEVDDEIITKTLDGKEIKSDIAILCIGF 245 (452)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred EEcCCCeEEEEEeCCCEEECCEEEECcCC
Confidence 1 2222223478999999998
No 201
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.71 E-value=0.00015 Score=73.23 Aligned_cols=88 Identities=17% Similarity=0.123 Sum_probs=66.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc---CCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA---HQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~---g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
..++|+|||||+.|+.+|..|.+. + .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~ 257 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPG--GKVTLCYRNNLIL--------RG--FDETIREEVTKQLTANGIEIMTNEN 257 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTT--CEEEEEESSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEEESCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHhCCCEEEeCCE
Confidence 467999999999999999999999 7 9999999887542 21 2235566777778888999988865
Q ss_pred ece---------EEEeccc-ccccCEEEEccCC
Q 014990 95 LGS---------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 95 v~~---------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
+.. .+...++ ...+|.||+|+|.
T Consensus 258 v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 258 PAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp EEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred EEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 522 2333333 3479999999998
No 202
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.71 E-value=2.6e-05 Score=75.70 Aligned_cols=39 Identities=26% Similarity=0.235 Sum_probs=36.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
++|+|||||++|+++|..|++.| .+|+|+|+.+.+||..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g--~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLN--KKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGT--CCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--CcEEEEecCCCCCcce
Confidence 58999999999999999999998 9999999999888865
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.71 E-value=0.00014 Score=73.32 Aligned_cols=88 Identities=20% Similarity=0.139 Sum_probs=67.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc---CCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA---HQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~---g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
..++++|||||+.|+.+|..|.+. + .+|+++++.+.+. |. ...++...+.+.+++.+++++.++.
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~ 253 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARG--GQVDLAYRGDMIL--------RG--FDSELRKQLTEQLRANGINVRTHEN 253 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTT--CEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTEEEEETCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCc--CeEEEEEcCCCcc--------cc--cCHHHHHHHHHHHHhCCCEEEeCCE
Confidence 467999999999999999999999 8 9999999887542 21 2235666777788888999998865
Q ss_pred ece---------EEEeccc-ccccCEEEEccCC
Q 014990 95 LGS---------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 95 v~~---------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
+.. .+...++ ...+|.||+|+|.
T Consensus 254 v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 254 PAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp EEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred EEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 522 2333333 3579999999998
No 204
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=9.4e-05 Score=73.99 Aligned_cols=88 Identities=16% Similarity=0.229 Sum_probs=66.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. |. ...++...+.+.+++.+++++.++.+..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtli~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 243 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIG--SEVTVVEFASEIV--------PT--MDAEIRKQFQRSLEKQGMKFKLKTKVVG 243 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHSSCCEECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEEcCCccc--------cc--ccHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 4689999999999999999999999 9999999887542 21 2235566777778888999988876521
Q ss_pred --------EEEec---c---cccccCEEEEccCC
Q 014990 98 --------SVSLS---E---LRQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~---~---~~~~~d~lvlAtG~ 117 (415)
.+... + ....+|.||+|+|.
T Consensus 244 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp EECSSSSEEEEEEESSSCCCEEEEESEEECCCCE
T ss_pred EEEcCCeEEEEEEecCCCcceEEECCEEEECCCC
Confidence 12222 2 23479999999998
No 205
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.69 E-value=3.3e-05 Score=75.88 Aligned_cols=37 Identities=19% Similarity=0.344 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCce-EEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQ-VDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~-v~lie~~~~~ 56 (415)
..++|+|||||++|+++|..|++.| .+ |+|||+.+.+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G--~~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAG--IGKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCCCc
Confidence 4579999999999999999999999 99 9999998654
No 206
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.69 E-value=0.0002 Score=70.91 Aligned_cols=89 Identities=17% Similarity=0.221 Sum_probs=65.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+.. . ....++...+.+.+++.+++++.++.+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G--~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 216 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKAN--MHVTLLDTAARVLE--------R-VTAPPVSAFYEHLHREAGVDIRTGTQVCG 216 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSTTT--------T-TSCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CEEEEEEeCCcccc--------c-hhhHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 4789999999999999999999999 99999998765421 1 12234556667777778999988765421
Q ss_pred -----------EEEeccc-ccccCEEEEccCC
Q 014990 98 -----------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 98 -----------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
.+...++ ...+|.||+|+|.
T Consensus 217 i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 217 FEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp EEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred EEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 1233333 2479999999997
No 207
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.69 E-value=0.0002 Score=72.15 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=66.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++|+|||||+.|+.+|..|++.+ .+|+++++.+.+.. . ...++...+.+.++.. ++++.++.+.
T Consensus 172 ~~~k~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l~--------~--~d~~~~~~l~~~l~~~-V~i~~~~~v~ 238 (492)
T 3ic9_A 172 DLPKSVAVFGPGVIGLELGQALSRLG--VIVKVFGRSGSVAN--------L--QDEEMKRYAEKTFNEE-FYFDAKARVI 238 (492)
T ss_dssp SCCSEEEEESSCHHHHHHHHHHHHTT--CEEEEECCTTCCTT--------C--CCHHHHHHHHHHHHTT-SEEETTCEEE
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEECCcccc--------c--CCHHHHHHHHHHHhhC-cEEEECCEEE
Confidence 35789999999999999999999999 99999998886421 1 1235556666777765 8888776652
Q ss_pred e--------EEEec--cc---ccccCEEEEccCCCCCCC
Q 014990 97 S--------SVSLS--EL---RQLYHVVVLAYGAESDRA 122 (415)
Q Consensus 97 ~--------~v~~~--~~---~~~~d~lvlAtG~~~~~~ 122 (415)
. .+... ++ ...+|.||+|+|. .|..
T Consensus 239 ~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~-~p~~ 276 (492)
T 3ic9_A 239 STIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR-KANV 276 (492)
T ss_dssp EEEECSSSEEEEEECTTCCEEEEEESEEEECSCC-EESC
T ss_pred EEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC-ccCC
Confidence 2 13322 22 3479999999998 4443
No 208
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.68 E-value=0.00024 Score=71.16 Aligned_cols=89 Identities=15% Similarity=0.295 Sum_probs=67.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+.
T Consensus 178 ~~~~~v~ViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~v~~~~~v~ 245 (476)
T 3lad_A 178 NVPGKLGVIGAGVIGLELGSVWARLG--AEVTVLEAMDKFL--------PA--VDEQVAKEAQKILTKQGLKILLGARVT 245 (476)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTEEEEETCEEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCcC--------cc--cCHHHHHHHHHHHHhCCCEEEECCEEE
Confidence 35679999999999999999999999 9999999887542 21 224566677778888899999887653
Q ss_pred e--------EEEecc----cccccCEEEEccCC
Q 014990 97 S--------SVSLSE----LRQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~--------~v~~~~----~~~~~d~lvlAtG~ 117 (415)
. .+...+ ....+|.||+|+|.
T Consensus 246 ~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 246 GTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp EEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred EEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 2 122222 13478999999998
No 209
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.67 E-value=3.1e-05 Score=75.60 Aligned_cols=37 Identities=30% Similarity=0.367 Sum_probs=33.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
.++|+|||||++|+++|..|++.| .+|+|+|+.+..+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G--~~V~vlE~~~~~~ 40 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERG--HRVLVLERHTFFN 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCCC
Confidence 479999999999999999999999 9999999987654
No 210
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.66 E-value=0.00018 Score=74.09 Aligned_cols=88 Identities=15% Similarity=0.177 Sum_probs=67.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 253 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERG--IEVTLVEMANQVM--------PP--IDYEMAAYVHEHMKNHDVELVFEDGVDA 253 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCccc--------cc--CCHHHHHHHHHHHHHcCCEEEECCeEEE
Confidence 4679999999999999999999999 9999999877532 22 2235566777778888999998776522
Q ss_pred ------EEEeccc-ccccCEEEEccCC
Q 014990 98 ------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
.+...++ ...+|.||+|+|.
T Consensus 254 i~~~~~~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 254 LEENGAVVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp EEGGGTEEEETTSCEEECSEEEECSCE
T ss_pred EecCCCEEEECCCCEEEcCEEEEccCC
Confidence 2334333 3479999999997
No 211
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.64 E-value=0.0003 Score=70.51 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=66.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+.
T Consensus 185 ~~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~~~~~l~~~gv~i~~~~~v~ 252 (478)
T 3dk9_A 185 ELPGRSVIVGAGYIAVEMAGILSALG--SKTSLMIRHDKVL--------RS--FDSMISTNCTEELENAGVEVLKFSQVK 252 (478)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEETTEEEE
T ss_pred hcCccEEEECCCHHHHHHHHHHHHcC--CeEEEEEeCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 34689999999999999999999999 9999999877542 11 123556677777888899998886552
Q ss_pred e----------EEEecc--------cccccCEEEEccCC
Q 014990 97 S----------SVSLSE--------LRQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~----------~v~~~~--------~~~~~d~lvlAtG~ 117 (415)
. .+...+ ....+|.||+|+|.
T Consensus 253 ~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 253 EVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp EEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred EEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 1 122222 23479999999997
No 212
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.64 E-value=0.00029 Score=66.19 Aligned_cols=86 Identities=22% Similarity=0.213 Sum_probs=63.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. + ...+...+.+.+++.+++++.++.+..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~----~~~~~~~l~~~l~~~gv~i~~~~~v~~ 209 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIA--SEVHLIHRRDGFR--------A----EKILIKRLMDKVENGNIILHTNRTLEE 209 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTS--SEEEEECSSSSCC--------C----CHHHHHHHHHHHHTSSEEEECSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--CeEEEEEeCCccc--------c----CHHHHHHHHHhcccCCeEEEcCceeEE
Confidence 4678999999999999999999998 9999999876531 1 123445566667778999988876521
Q ss_pred ---------EEEecc----c---ccccCEEEEccCC
Q 014990 98 ---------SVSLSE----L---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~~----~---~~~~d~lvlAtG~ 117 (415)
.+...+ + ...+|.||+|+|.
T Consensus 210 i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp EEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred EEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 133322 2 3478999999997
No 213
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.63 E-value=3.4e-05 Score=76.41 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+++|+|||||++|+++|..|++.| ++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G--~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHD--VDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTT--CEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CeEEEEcCCC
Confidence 368999999999999999999999 9999999876
No 214
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.62 E-value=0.00024 Score=71.70 Aligned_cols=88 Identities=17% Similarity=0.180 Sum_probs=66.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~V~~ 248 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELG--VPVTVVASQDHVL--------PY--EDADAALVLEESFAERGVRLFKNARAAS 248 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTT--CCEEEECSSSSSS--------CC--SSHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4688999999999999999999999 9999999887542 22 2235666777788888999998866522
Q ss_pred --------EEEeccc-ccccCEEEEccCC
Q 014990 98 --------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
.+...++ ...+|.||+|+|.
T Consensus 249 i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 249 VTRTGAGVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp EEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred EEEeCCEEEEEECCCcEEEcCEEEECCCC
Confidence 1222233 3479999999998
No 215
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.61 E-value=5.8e-05 Score=79.03 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=38.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
...++|+|||+|++|+++|..|.+.| ++|+|+|+.+.+||..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g--~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFG--MDVTLLEARDRVGGRV 146 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSSSSBTTC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEecCCCCCCcc
Confidence 46789999999999999999999999 9999999999988854
No 216
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.61 E-value=7e-05 Score=72.13 Aligned_cols=36 Identities=31% Similarity=0.331 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|+|||||.+|+++|..|++.| .+|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G--~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKG--YSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CEEEEEeccCC
Confidence 5679999999999999999999999 99999999764
No 217
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.61 E-value=0.00026 Score=67.98 Aligned_cols=95 Identities=16% Similarity=0.163 Sum_probs=61.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccC-eEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHER-CSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ 96 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+... . ..+....+......+.+.+++.+ ++++.+..+.
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g--~~V~lv~~~~~~~~~-~--~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~ 239 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNG--SDIALYTSTTGLNDP-D--ADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVK 239 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTT--CEEEEECC-------------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcC--CeEEEEecCCCCCCC-C--CCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEE
Confidence 4568999999999999999999998 999999988654311 0 11222233455566777777775 9888775542
Q ss_pred e--------EEEecccc-c-ccCEEEEccCC
Q 014990 97 S--------SVSLSELR-Q-LYHVVVLAYGA 117 (415)
Q Consensus 97 ~--------~v~~~~~~-~-~~d~lvlAtG~ 117 (415)
. .+...++. . .+|.||+|||.
T Consensus 240 ~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 240 DIDFNNGQYHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp EEEEETTEEEEEESSSCCEEESSCCEECCCB
T ss_pred EEEecCCceEEEecCCeEeccCCceEEeecc
Confidence 1 23333333 2 35999999998
No 218
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.61 E-value=4.8e-05 Score=77.10 Aligned_cols=40 Identities=28% Similarity=0.265 Sum_probs=36.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL 59 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~ 59 (415)
..++|||||+|+||+++|..|++.| .+|+|+||.+..||.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G--~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAG--ADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCCCCc
Confidence 3578999999999999999999999 999999999887654
No 219
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.60 E-value=0.00032 Score=69.68 Aligned_cols=88 Identities=18% Similarity=0.119 Sum_probs=64.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+.. . ....++...+.+.+++. ++++.++.+..
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l~--------~-~~~~~~~~~l~~~l~~~-v~i~~~~~v~~ 214 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQG--KNVTMIVRGERVLR--------R-SFDKEVTDILEEKLKKH-VNLRLQEITMK 214 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTTT--------T-TSCHHHHHHHHHHHTTT-SEEEESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEEcCCccch--------h-hcCHHHHHHHHHHHHhC-cEEEeCCeEEE
Confidence 4679999999999999999999999 99999998875421 1 01235566677777777 88887765522
Q ss_pred --------EEEecccccccCEEEEccCC
Q 014990 98 --------SVSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~~~~~~d~lvlAtG~ 117 (415)
.+..+.....+|.||+|+|.
T Consensus 215 i~~~~~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 215 IEGEERVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp EECSSSCCEEEETTEEEECSEEEECSCE
T ss_pred EeccCcEEEEEeCCCEEECCEEEEeeCC
Confidence 12222233579999999998
No 220
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.59 E-value=0.00027 Score=70.62 Aligned_cols=89 Identities=12% Similarity=0.090 Sum_probs=68.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+.
T Consensus 168 ~~~~~v~ViGgG~~g~e~A~~l~~~g--~~Vt~v~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 235 (463)
T 4dna_A 168 ALPESILIAGGGYIAVEFANIFHGLG--VKTTLIYRGKEIL--------SR--FDQDMRRGLHAAMEEKGIRILCEDIIQ 235 (463)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEECCCEEE
Confidence 35789999999999999999999999 9999999887532 11 123566777778888899999876552
Q ss_pred e---------EEE-ecccccccCEEEEccCC
Q 014990 97 S---------SVS-LSELRQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~---------~v~-~~~~~~~~d~lvlAtG~ 117 (415)
. .+. .+++...+|.||+|+|.
T Consensus 236 ~i~~~~~~~~~v~~~~~g~i~aD~Vv~a~G~ 266 (463)
T 4dna_A 236 SVSADADGRRVATTMKHGEIVADQVMLALGR 266 (463)
T ss_dssp EEEECTTSCEEEEESSSCEEEESEEEECSCE
T ss_pred EEEEcCCCEEEEEEcCCCeEEeCEEEEeeCc
Confidence 1 233 33444679999999998
No 221
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.59 E-value=0.00033 Score=70.11 Aligned_cols=89 Identities=12% Similarity=0.156 Sum_probs=66.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
..++|+|||+|+.|+.+|..|++. + .+|+++++.+.+. +. ....++...+.+.+++.+++++.++.+.
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 226 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWG--IDTTVVELADQIM--------PG-FTSKSLSQMLRHDLEKNDVVVHTGEKVV 226 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHC--CEEEEECSSSSSS--------TT-TSCHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcC--CcEEEEEccCccc--------cc-ccCHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 468999999999999999999999 9 9999999876532 20 1223566677778888899999886552
Q ss_pred e--------EEEeccc-ccccCEEEEccCC
Q 014990 97 S--------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~--------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
. .+...++ ...+|.||+|+|.
T Consensus 227 ~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 227 RLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp EEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred EEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 2 1233333 3479999999998
No 222
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.59 E-value=4e-05 Score=73.52 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=32.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC----CCceEEEEcCCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAH----QEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g----~~~~v~lie~~~~ 55 (415)
++|+|||||.+|+++|.+|++.| |+.+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 58999999999999999999996 5689999999864
No 223
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.58 E-value=5.4e-05 Score=73.38 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=33.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
.++|+|||||++|+++|..|++.| .+|+|||+.+..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G--~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQG--VKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCCC
Confidence 478999999999999999999999 9999999987654
No 224
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.57 E-value=7.5e-05 Score=79.98 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=38.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
...++|+|||+|++|+++|..|.+.| ++|+|+|+.+.+||.+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g--~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFG--MDVTLLEARDRVGGRV 317 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEEecCcCCCce
Confidence 46789999999999999999999999 9999999999998864
No 225
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.57 E-value=6.3e-05 Score=75.72 Aligned_cols=44 Identities=25% Similarity=0.375 Sum_probs=39.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS 62 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~ 62 (415)
..++|+|||||++|+++|..|++.+ ..+|+|+|+.+.+||.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g-~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELG-YKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEeCCCCCCCeeee
Confidence 5689999999999999999999986 3599999999999887653
No 226
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.56 E-value=0.00037 Score=70.00 Aligned_cols=89 Identities=17% Similarity=0.125 Sum_probs=67.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
...++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+.
T Consensus 189 ~~~~~v~ViGgG~~g~e~A~~l~~~g--~~Vtli~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~V~ 256 (484)
T 3o0h_A 189 KLPKSIVIVGGGYIGVEFANIFHGLG--VKTTLLHRGDLIL--------RN--FDYDLRQLLNDAMVAKGISIIYEATVS 256 (484)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEESSCCEE
T ss_pred hcCCcEEEECcCHHHHHHHHHHHHcC--CeEEEEECCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 35789999999999999999999999 9999999887542 21 123556667777788899998876652
Q ss_pred e--------EEEeccc-ccccCEEEEccCC
Q 014990 97 S--------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~--------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
. .+...++ ...+|.||+|+|.
T Consensus 257 ~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 257 QVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp EEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred EEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 2 2333444 3479999999998
No 227
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.55 E-value=0.00031 Score=70.76 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=64.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH----cCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK----AHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNV 93 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~----~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
..++|+|||||+.|+.+|..|++ .+ .+|+++++.+.+.. ...+.++...+.+.+++.+++++.++
T Consensus 179 ~~~~vvViGgG~iG~E~A~~l~~~~~~~g--~~V~~v~~~~~~~~---------~~l~~~~~~~~~~~l~~~GV~v~~~~ 247 (493)
T 1m6i_A 179 EVKSITIIGGGFLGSELACALGRKARALG--TEVIQLFPEKGNMG---------KILPEYLSNWTMEKVRREGVKVMPNA 247 (493)
T ss_dssp HCSEEEEECCSHHHHHHHHHHHHHHHHHT--CEEEEECSSSSTTT---------TTSCHHHHHHHHHHHHTTTCEEECSC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhhhhcC--CEEEEEecCccccc---------ccCCHHHHHHHHHHHHhcCCEEEeCC
Confidence 36899999999999999999987 35 89999987754211 11123556667777888899999886
Q ss_pred Eece--------EEEeccc-ccccCEEEEccCC
Q 014990 94 TLGS--------SVSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 94 ~v~~--------~v~~~~~-~~~~d~lvlAtG~ 117 (415)
.+.. .+...++ ...+|.||+|+|.
T Consensus 248 ~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 248 IVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred EEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 5522 1333333 3479999999998
No 228
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.54 E-value=7.7e-05 Score=73.97 Aligned_cols=41 Identities=22% Similarity=0.136 Sum_probs=38.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
..++|+|||+|++|+++|..|++.| .+|+++|+++.+||..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g--~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNG--KKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC--CcEEEEecCCCccccc
Confidence 5679999999999999999999999 9999999999988864
No 229
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.54 E-value=0.00043 Score=65.55 Aligned_cols=86 Identities=16% Similarity=0.181 Sum_probs=64.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. +. .+....+.+.+++.+++++.++.+..
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g--~~V~~v~~~~~~~--------~~----~~~~~~l~~~l~~~gv~v~~~~~v~~ 216 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTA--RRITLIHRRPQFR--------AH----EASVKELMKAHEEGRLEVLTPYELRR 216 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTS--SEEEEECSSSSCC--------SC----HHHHHHHHHHHHTTSSEEETTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhC--CEEEEEEcCCccC--------cc----HHHHHHHHhccccCCeEEecCCccee
Confidence 4679999999999999999999998 9999999876531 11 23445666677777899988865521
Q ss_pred --------EEEec---cc---ccccCEEEEccCC
Q 014990 98 --------SVSLS---EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~---~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 217 i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 217 VEGDERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred EccCCCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 23332 23 3479999999997
No 230
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.53 E-value=1.6e-05 Score=80.46 Aligned_cols=86 Identities=14% Similarity=0.072 Sum_probs=50.7
Q ss_pred ccCEEEEccCCCCCCCCCCCCCCCCCeeechhhHHHhcC----CCCCCCC-CCCCCCCCeEEEEcCChhHHHHHHHHhcC
Q 014990 107 LYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNG----HPDGKNL-SPDLKSTDTAVILGQGNVALDVARILLRP 181 (415)
Q Consensus 107 ~~d~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~----~~~~~~~-~~~~~~~k~V~VVG~G~sg~e~a~~L~~~ 181 (415)
.||.+++++|+. ++.+++++.+.+++............ ... ... ........+|+|||+|++|+.+|..|++
T Consensus 37 ~~~~l~~~~g~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~- 113 (497)
T 2bry_A 37 SFQGLCRALGVE-SGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQ-PVYQQGQACTNTKCLVVGAGPCGLRAAVELAL- 113 (497)
T ss_dssp HHHHHHHHHTCC-TTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTS-GGGGGGTTTTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred HHHHHHHHhCCC-CCCCcEeehhhHHHHHHHHHHHhhhhhhhhhcc-ccccCccccCCCCEEEECccHHHHHHHHHHHH-
Confidence 678899999994 66655554332222222111110000 000 000 0001246799999999999999999996
Q ss_pred cccccccCchhHHHHHhhcCCcceEEEEeecCcc
Q 014990 182 TEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (415)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~ 215 (415)
.| .+|+++.+++..
T Consensus 114 -------------------~G-~~V~liEk~~~~ 127 (497)
T 2bry_A 114 -------------------LG-ARVVLVEKRIKF 127 (497)
T ss_dssp -------------------TT-CEEEEEESCSSC
T ss_pred -------------------CC-CeEEEEEecccc
Confidence 45 489999987543
No 231
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.52 E-value=0.00039 Score=71.14 Aligned_cols=88 Identities=14% Similarity=0.151 Sum_probs=65.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.+++++.++.+..
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 217 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLG--IKTTLLELADQVM--------TP--VDREMAGFAHQAIRDQGVDLRLGTALSE 217 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEEETCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CcEEEEEcCCccc--------hh--cCHHHHHHHHHHHHHCCCEEEeCCeEEE
Confidence 4579999999999999999999999 9999999877432 21 2235566677778888999988765522
Q ss_pred E---------------------------EEeccc-ccccCEEEEccCC
Q 014990 98 S---------------------------VSLSEL-RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ~---------------------------v~~~~~-~~~~d~lvlAtG~ 117 (415)
- +...++ ...+|.||+|+|.
T Consensus 218 i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 218 VSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp EEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred EeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 1 222222 2478999999998
No 232
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.49 E-value=0.00058 Score=68.51 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=64.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++...+ +. ...++...+.+.+++.+++++.++.+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~l---------~~--~d~~~~~~l~~~l~~~Gv~i~~~~~v~~ 252 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLG--YEPTVMVRSIVL---------RG--FDQQMAELVAASMEERGIPFLRKTVPLS 252 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSCSS---------TT--SCHHHHHHHHHHHHHTTCCEEETEEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCCCC---------cc--cCHHHHHHHHHHHHhCCCEEEeCCEEEE
Confidence 4678999999999999999999999 999999874211 22 1245666777778888999988866521
Q ss_pred ---------EEEeccc------ccccCEEEEccCC
Q 014990 98 ---------SVSLSEL------RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~~~------~~~~d~lvlAtG~ 117 (415)
.+...+. ...+|.||+|+|.
T Consensus 253 i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 253 VEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp EEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred EEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 1332222 2478999999997
No 233
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.48 E-value=7.5e-05 Score=76.39 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
.++|+||||||+|+++|..|++.| .+|+|||+.+.+
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G--~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQ--VGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCCC
Confidence 468999999999999999999999 999999998654
No 234
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.48 E-value=0.00012 Score=74.77 Aligned_cols=36 Identities=22% Similarity=0.461 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH---cCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~---~g~~~~v~lie~~~~ 55 (415)
..++|+|||||++|+++|..|++ .| .+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G--~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQ--ANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSS--CEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCC--CEEEEECCCCC
Confidence 46799999999999999999999 88 99999999653
No 235
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.48 E-value=0.00045 Score=65.20 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=59.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHh-hccCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVV-QHERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~ 96 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+.. . ..+.+.+ +..+++++.++.+.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g--~~v~~v~~~~~~~~------------~----~~~~~~l~~~~gv~i~~~~~v~ 233 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYG--SKVFMLVRKDHLRA------------S----TIMQKRAEKNEKIEILYNTVAL 233 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTS--SEEEEECSSSSCCS------------C----HHHHHHHHHCTTEEEECSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEEcCCccCC------------C----HHHHHHHHhcCCeEEeecceeE
Confidence 5688999999999999999999998 99999998775421 1 1222233 34589998876652
Q ss_pred e---------EEEecc------cccccCEEEEccCC
Q 014990 97 S---------SVSLSE------LRQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~---------~v~~~~------~~~~~d~lvlAtG~ 117 (415)
. .+...+ ....+|.||+|+|.
T Consensus 234 ~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 234 EAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp EEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred EEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 2 133333 23479999999997
No 236
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.47 E-value=0.00063 Score=68.98 Aligned_cols=87 Identities=17% Similarity=0.133 Sum_probs=62.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++...+ +. ...++...+.+.+++.+++++.+..+..
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G--~~Vtlv~~~~~l---------~~--~d~~~~~~~~~~l~~~GV~v~~~~~v~~ 275 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIG--LDVTVMVRSILL---------RG--FDQDMANKIGEHMEEHGIKFIRQFVPIK 275 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCSS---------TT--SCHHHHHHHHHHHHHTTCEEEESEEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcC--CeEEEEeccccc---------cc--CCHHHHHHHHHHHHHCCCEEEeCCeEEE
Confidence 4567999999999999999999999 999999974211 22 1245666777778888999988754311
Q ss_pred ------------EEEe--ccc----ccccCEEEEccCC
Q 014990 98 ------------SVSL--SEL----RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ------------~v~~--~~~----~~~~d~lvlAtG~ 117 (415)
.+.. .+. ...+|.||+|+|.
T Consensus 276 v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 276 VEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp EEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred EEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 1111 122 2358999999997
No 237
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.46 E-value=0.00067 Score=68.18 Aligned_cols=87 Identities=13% Similarity=0.126 Sum_probs=63.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++...+ +. ...++...+.+.+++.+++++.++.+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~l---------~~--~d~~~~~~l~~~l~~~gv~~~~~~~v~~ 250 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIG--LDTTVMMRSIPL---------RG--FDQQMSSLVTEHMESHGTQFLKGCVPSH 250 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCSS---------TT--SCHHHHHHHHHHHHHTTCEEEETEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CceEEEEcCccc---------cc--CCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4568999999999999999999999 999999875311 22 1245666777788888999988865421
Q ss_pred ---------EEEecc---cc---cccCEEEEccCC
Q 014990 98 ---------SVSLSE---LR---QLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~~---~~---~~~d~lvlAtG~ 117 (415)
.+...+ +. ..+|.||+|+|.
T Consensus 251 i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 251 IKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp EEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred EEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 122222 22 368999999997
No 238
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.46 E-value=0.00013 Score=74.71 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH---cCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~---~g~~~~v~lie~~~~ 55 (415)
..++|||||||+||+++|..|++ .| .+|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G--~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGT--ADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTS--SEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC--CcEEEEeCCCC
Confidence 46799999999999999999999 77 99999998753
No 239
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.46 E-value=9.9e-05 Score=73.89 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=36.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCCCCCccc
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVR 61 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~~gg~~~ 61 (415)
..++|+|||||++|+++|..|.+.+ . +|+|+|+.+.+||...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g--~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAG--ITDLLILEATDHIGGRMH 45 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTT--CCCEEEECSSSSSBTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--CCceEEEeCCCCCCCcee
Confidence 4679999999999999999999998 8 8999999999888643
No 240
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.41 E-value=0.00013 Score=74.79 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=37.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
...++|+|||||++|+++|..|+++| .+|+|+|+.+..+|..
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~G--~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVRG--IQTGLVEMNDFASGTS 57 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTTT--CCEEEEESSSTTCSGG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCC--CcEEEEECCCCCCCcc
Confidence 35789999999999999999999999 9999999997655543
No 241
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.39 E-value=0.00014 Score=73.49 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=33.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
+.++|+|||||++|+++|..|+++| .+|+|+|+.+..+
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G--~~V~llE~~~~~~ 39 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRG--LSVLMLEAQDLAC 39 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSTTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC--CCEEEEECCCCCC
Confidence 3579999999999999999999999 9999999986433
No 242
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.39 E-value=0.00013 Score=74.13 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH------------cCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK------------AHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~------------~g~~~~v~lie~~~~ 55 (415)
..++|+|||||+||+++|..|++ .| .+|+|||+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G--~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPK--LNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCS--CEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCC--CeEEEEeCCCC
Confidence 45799999999999999999999 77 99999998754
No 243
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.38 E-value=0.00013 Score=72.94 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=39.3
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCcc
Q 014990 15 LSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (415)
Q Consensus 15 ~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~ 60 (415)
+.+..++|+|||+|.+|+++|..|++.| .+|+++|+++..||..
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g--~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYG--KKILVLDRNPYYGGET 59 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGG
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeccCCCCCCc
Confidence 3446789999999999999999999999 9999999999988864
No 244
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.38 E-value=0.00011 Score=76.49 Aligned_cols=36 Identities=25% Similarity=0.428 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~-~g~~~~v~lie~~~~ 55 (415)
..++|+||||||+|+++|..|++ .| .+|+|||+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G--~~V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPD--IRTCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTT--SCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCC--CCEEEEeCCCC
Confidence 35689999999999999999999 89 99999999864
No 245
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.37 E-value=0.00026 Score=71.72 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=36.5
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.|+++++++.++++. . +++.+.++++... +|+..++.+|.||.|+|...
T Consensus 123 ~~Gv~i~~~~~V~~v~--~-~~~~v~gv~~~~~--------------dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 123 RKGVDVRERHEVIDVL--F-EGERAVGVRYRNT--------------EGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HTTCEEESSCEEEEEE--E-ETTEEEEEEEECS--------------SSCEEEEEEEEEEECCCTTC
T ss_pred hCCCEEEcCCEEEEEE--E-ECCEEEEEEEEeC--------------CCCEEEEEcCEEEECCCcch
Confidence 4579999999998887 4 4555655655421 35545899999999999864
No 246
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.37 E-value=0.00014 Score=77.26 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=37.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg 58 (415)
+..++|+|||||++|+++|..|++.| .+|+|+|+.+.+||
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFG--IKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEecccceec
Confidence 34689999999999999999999999 99999999988887
No 247
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.35 E-value=0.0002 Score=69.40 Aligned_cols=34 Identities=35% Similarity=0.400 Sum_probs=31.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
++|+|||||+||+.+|..|++.| .+|+|||+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G--~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLG--VPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCC--CcEEEEeccCC
Confidence 68999999999999999999999 99999998763
No 248
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.33 E-value=0.00012 Score=73.97 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=29.9
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCCceEEEEcCCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~---~g~~~~v~lie~~~~ 55 (415)
++|||||||++|+++|..|++ .| .+|+|||+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G--~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDR--IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGG--SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCC--CEEEEEecCCC
Confidence 689999999999999999999 88 99999998753
No 249
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.31 E-value=0.00089 Score=64.81 Aligned_cols=138 Identities=16% Similarity=0.234 Sum_probs=76.3
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCC------CHHHHHHHHcC---
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAAC------TAKELREILGI--- 230 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~------~~~~l~~~~~~--- 230 (415)
..|+|||+|.+|+-+|..|++ .| .+|+++.+........ ....+.++ ..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~--------------------~G-~~V~l~E~~~~~g~~~~~~~~~~~~~~~~l-g~~~~ 62 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK--------------------YG-LKTLMIEKRPEIGSPVRCGEGLSKGILNEA-DIKAD 62 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSSSTTCSCCSCCEEETHHHHHT-TCCCC
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CC-CCEEEEeCCCCCCCCcccccccCHHHHHHc-CCCCC
Confidence 479999999999999999996 34 4899999886432211 11223322 11
Q ss_pred -CCeeEEEcccccC--------CCCCcH--HhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCC
Q 014990 231 -KNLYVHIREDDLI--------KSPTDE--EEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNE 299 (415)
Q Consensus 231 -~~~~~~~~~~~~~--------~~p~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~ 299 (415)
......+....+. .++... ........+..+...|..... +.|+.+++++.++++. .
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~gv~i~~~~~v~~i~--~- 130 (397)
T 3cgv_A 63 RSFIANEVKGARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA---------KAGADVWVKSPALGVI--K- 130 (397)
T ss_dssp TTTEEEEESEEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHH---------HHTCEEESSCCEEEEE--E-
T ss_pred hHHhhhhcceEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHH---------hCCCEEEECCEEEEEE--E-
Confidence 1111111111111 000000 000001112333344444332 4579999999988886 4
Q ss_pred CCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 300 RSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 300 ~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+++.+.+|++.. .+++.++.+|.||.|+|...
T Consensus 131 ~~~~v~gv~~~~---------------~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 131 ENGKVAGAKIRH---------------NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp ETTEEEEEEEEE---------------TTEEEEEEEEEEEECCCTTC
T ss_pred eCCEEEEEEEEE---------------CCeEEEEEcCEEEECCCcch
Confidence 355565565533 34556899999999999754
No 250
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.30 E-value=0.00086 Score=64.26 Aligned_cols=86 Identities=17% Similarity=0.189 Sum_probs=61.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+.. . ......+.+..++.+++++.++.+..
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~~~--------~----~~~~~~l~~~~~~~gv~i~~~~~v~~ 227 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNA--ASVTLVHRGHEFQG--------H----GKTAHEVERARANGTIDVYLETEVAS 227 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTS--SEEEEECSSSSCSS--------C----SHHHHSSHHHHHHTSEEEESSEEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcC--CEEEEEEcCCCCCC--------C----HHHHHHHHHHhhcCceEEEcCcCHHH
Confidence 4678999999999999999999998 99999998765321 1 12334445555666888888765421
Q ss_pred ---------EEEec--cc---ccccCEEEEccCC
Q 014990 98 ---------SVSLS--EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~--~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 228 i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 228 IEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp EEEETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred hccCCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 23332 32 3479999999997
No 251
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.29 E-value=0.00058 Score=67.93 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=33.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
..++|+|||||..|+.+|..|++..+..+|+++++.+.+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 478999999999999999999999434999999988753
No 252
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.25 E-value=0.0018 Score=60.97 Aligned_cols=83 Identities=20% Similarity=0.220 Sum_probs=58.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ..+ ..++.+..+++++.++.+..
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~~----~~~---~~~l~~~~gv~i~~~~~v~~ 213 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFA--DEVTVIHRRDTLR--------AN----KVA---QARAFANPKMKFIWDTAVEE 213 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTC--SEEEEECSSSSCC--------SC----HHH---HHHHHTCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEeCCCcCC--------cc----hHH---HHHHHhcCCceEecCCceEE
Confidence 4589999999999999999999998 9999999876531 11 112 12333446898887765521
Q ss_pred --------EEEec---cc---ccccCEEEEccCC
Q 014990 98 --------SVSLS---EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~---~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 214 i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 214 IQGADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred EccCCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 13332 22 3479999999997
No 253
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.24 E-value=0.00017 Score=74.32 Aligned_cols=36 Identities=17% Similarity=0.335 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
.++|||||||+||+++|..|++.| .+|+|+|+.+..
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G--~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSG--QTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CcEEEEecCCCC
Confidence 568999999999999999999999 999999998643
No 254
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.24 E-value=0.00021 Score=72.94 Aligned_cols=38 Identities=29% Similarity=0.435 Sum_probs=33.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg 58 (415)
..++|||||||+||+++|..|++ | .+|+|+|+.+..++
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G--~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-Q--HQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-T--SCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-C--CcEEEEECCCCCCC
Confidence 45799999999999999999999 8 99999999876543
No 255
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.23 E-value=0.0017 Score=60.59 Aligned_cols=82 Identities=15% Similarity=0.188 Sum_probs=57.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhc-cCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQH-ERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~ 96 (415)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. .. . .+.+.+.. .+++++.++.+.
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~~----~----~~~~~l~~~~gv~v~~~~~v~ 204 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIV--EHVTLLEFAPEMK--------AD----Q----VLQDKLRSLKNVDIILNAQTT 204 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTB--SEEEEECSSSSCC--------SC----H----HHHHHHHTCTTEEEESSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhC--CEEEEEEeCcccC--------cc----H----HHHHHHhhCCCeEEecCCceE
Confidence 4679999999999999999999998 9999999887541 01 1 22233444 588888776552
Q ss_pred e---------EEEecc---c---ccccCEEEEccCC
Q 014990 97 S---------SVSLSE---L---RQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~---------~v~~~~---~---~~~~d~lvlAtG~ 117 (415)
. .+...+ + ...+|.||+|+|.
T Consensus 205 ~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 205 EVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp EEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred EEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 1 122221 2 2468999999997
No 256
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.22 E-value=0.0019 Score=60.96 Aligned_cols=83 Identities=18% Similarity=0.183 Sum_probs=59.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. .. ..+ ..++++..+++++.++.+..
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~~--------~~----~~~---~~~~~~~~gv~i~~~~~v~~ 220 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYG--SKVYIIHRRDAFR--------AS----KIM---QQRALSNPKIDVIWNSSVVE 220 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS--SEEEEECSSSSCC--------SC----HHH---HHHHHTCTTEEEECSEEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcC--CeEEEEecCCcCC--------cc----HHH---HHHHHhCCCeeEecCCceEE
Confidence 5689999999999999999999998 9999999887541 11 111 12344667899887765521
Q ss_pred -----------EEEecc------cccccCEEEEccCC
Q 014990 98 -----------SVSLSE------LRQLYHVVVLAYGA 117 (415)
Q Consensus 98 -----------~v~~~~------~~~~~d~lvlAtG~ 117 (415)
.+.... ....+|.||+|+|.
T Consensus 221 i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 221 AYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp EEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred EeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 133321 23479999999998
No 257
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.21 E-value=0.0019 Score=60.15 Aligned_cols=83 Identities=13% Similarity=0.137 Sum_probs=60.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. .. .+ ...+.++..+++++.++.+..
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g--~~v~~~~~~~~~~--------~~----~~---~~~~~~~~~gv~~~~~~~v~~ 208 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANIC--SKIYLIHRRDEFR--------AA----PS---TVEKVKKNEKIELITSASVDE 208 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTS--SEEEEECSSSSCB--------SC----HH---HHHHHHHCTTEEEECSCEEEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhC--CEEEEEEeCCCCC--------CC----HH---HHHHHHhcCCeEEEeCcEEEE
Confidence 4689999999999999999999998 9999999877541 11 12 223344577899988776522
Q ss_pred ---------EEEec--cc---ccccCEEEEccCC
Q 014990 98 ---------SVSLS--EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~--~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 209 i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 209 VYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp EEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred EEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 12232 33 3479999999997
No 258
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.21 E-value=0.0014 Score=66.22 Aligned_cols=88 Identities=18% Similarity=0.278 Sum_probs=63.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcC------------CCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCe
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAH------------QEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERC 87 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g------------~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (415)
.+++|||||+.|+.+|..|++.. .+.+|+|+|..+.+. |.+ ..++.....+.+++.|+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il--------~~~--~~~~~~~~~~~L~~~GV 287 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL--------NMF--EKKLSSYAQSHLENTSI 287 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS--------TTS--CHHHHHHHHHHHHHTTC
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc--------cCC--CHHHHHHHHHHHHhcce
Confidence 57999999999999999887532 126899999887642 322 24566777888888999
Q ss_pred EEEeceEece----EE----Eeccc-----ccccCEEEEccCC
Q 014990 88 SFFGNVTLGS----SV----SLSEL-----RQLYHVVVLAYGA 117 (415)
Q Consensus 88 ~~~~~~~v~~----~v----~~~~~-----~~~~d~lvlAtG~ 117 (415)
+++.++.+.. .+ ...++ ...+|.||.|+|.
T Consensus 288 ~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 288 KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 9999887632 11 11222 2479999999997
No 259
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.21 E-value=0.00031 Score=72.18 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=35.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg 58 (415)
..++|+|||||.+|+++|..|+++| .+|+|+|+.+..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG--~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASG--IKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCCCCC
Confidence 4689999999999999999999999 99999999875444
No 260
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.20 E-value=0.00023 Score=73.61 Aligned_cols=37 Identities=24% Similarity=0.448 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
.++|||||||+||+++|..|++.|++.+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 4789999999999999999999886689999999754
No 261
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.20 E-value=0.0002 Score=70.97 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|+|||||++|+++|..|+++|+ .+|+|||+...
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~-~~V~vlE~~~~ 58 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSG-GSVLVVDAGHA 58 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHC-SCEEEEESSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC-CcEEEEccCCC
Confidence 45799999999999999999999873 69999999433
No 262
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.20 E-value=0.0023 Score=59.74 Aligned_cols=83 Identities=16% Similarity=0.145 Sum_probs=58.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. .. ..+. ..+.+..+++++.+..+..
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~~----~~~~---~~l~~~~gv~v~~~~~v~~ 204 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANIC--KKVYLIHRRDGFR--------CA----PITL---EHAKNNDKIEFLTPYVVEE 204 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTS--SEEEEECSSSSCC--------SC----HHHH---HHHHTCTTEEEETTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEeeCCccC--------CC----HHHH---HHHhhCCCeEEEeCCEEEE
Confidence 4689999999999999999999998 9999999876541 01 1122 2223346888887765421
Q ss_pred ---------EEEec---cc---ccccCEEEEccCC
Q 014990 98 ---------SVSLS---EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~---~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 205 i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 205 IKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp EEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred EECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 13332 22 2479999999997
No 263
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.19 E-value=0.00021 Score=74.06 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|||||||+||++||..|++.| .+|+|+|+...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G--~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAG--FNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCC--CcEEEEeccCC
Confidence 4579999999999999999999999 99999999854
No 264
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.18 E-value=0.00026 Score=74.11 Aligned_cols=35 Identities=37% Similarity=0.533 Sum_probs=32.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLK-----AHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~-----~g~~~~v~lie~~~~ 55 (415)
.++|+||||||+|+++|..|++ .| ++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~G--i~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPD--LKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTT--CCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCC--CCEEEEeCCCC
Confidence 5789999999999999999999 88 99999998743
No 265
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.17 E-value=0.0014 Score=62.04 Aligned_cols=83 Identities=18% Similarity=0.233 Sum_probs=58.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. .. +.+. .+++++.+++++.+..+..
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g--~~V~l~~~~~~~~--------~~----~~~~---~~~~~~~gV~v~~~~~v~~ 216 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFA--RSVTLVHRRDEFR--------AS----KIML---DRARNNDKIRFLTNHTVVA 216 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTC--SEEEEECSSSSCS--------SC----TTHH---HHHHHCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhC--CeEEEEEcCCcCC--------cc----HHHH---HHHhccCCcEEEeCceeEE
Confidence 4689999999999999999999998 9999999876541 11 1111 1234567899888766521
Q ss_pred --------EEEec---cc---ccccCEEEEccCC
Q 014990 98 --------SVSLS---EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~---~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 217 i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 217 VDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp EECSSSCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred EecCCcEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 13332 12 3479999999998
No 266
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.13 E-value=0.0022 Score=66.06 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=60.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.. + .+. ...+....+.+.+++.+++++.+..+..
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~-~--------l~~--~d~~~~~~~~~~l~~~gv~i~~~~~v~~ 351 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLG--GDVTVMVRSI-L--------LRG--FDQQMAEKVGDYMENHGVKFAKLCVPDE 351 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC-S--------STT--SCHHHHHHHHHHHHHTTCEEEETEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEECCc-C--------cCc--CCHHHHHHHHHHHHhCCCEEEECCeEEE
Confidence 4568999999999999999999999 8999999762 1 122 1234455666677778999887753211
Q ss_pred ---------------E--EE--ecccc-c--ccCEEEEccCC
Q 014990 98 ---------------S--VS--LSELR-Q--LYHVVVLAYGA 117 (415)
Q Consensus 98 ---------------~--v~--~~~~~-~--~~d~lvlAtG~ 117 (415)
. +. ..++. . .+|.||+|+|.
T Consensus 352 v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 352 IKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp EEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred EEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 1 11 11222 2 38999999998
No 267
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.12 E-value=0.00028 Score=73.61 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
.++|||||||.||+++|..|++.| .+|+|+|+.+..
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G--~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKG--LSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTT--CCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCC--CcEEEEeccCCC
Confidence 568999999999999999999999 999999998643
No 268
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.12 E-value=0.0026 Score=59.35 Aligned_cols=83 Identities=20% Similarity=0.167 Sum_probs=60.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+.. . .+ ...++.+..+++++.++.+..
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g--~~v~~~~~~~~~~~--------~----~~---~~~~~~~~~gv~~~~~~~v~~ 215 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYS--TKVYLIHRRDTFKA--------Q----PI---YVETVKKKPNVEFVLNSVVKE 215 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHS--SEEEEECSSSSCCS--------C----HH---HHHHHHTCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhC--CeEEEEEeCCCCCc--------C----HH---HHHHHHhCCCcEEEeCCEEEE
Confidence 5689999999999999999999998 99999998765421 1 11 223344556899988875521
Q ss_pred --------EEEecc---c---ccccCEEEEccCC
Q 014990 98 --------SVSLSE---L---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~---~---~~~~d~lvlAtG~ 117 (415)
.+...+ + ...+|.||+|+|.
T Consensus 216 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 216 IKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred EeccCceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 133332 3 3479999999998
No 269
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.11 E-value=0.0021 Score=64.14 Aligned_cols=86 Identities=22% Similarity=0.241 Sum_probs=58.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +.. ...++...+.+.++ ++++.++.+..
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~~-~d~~~~~~l~~~l~---v~i~~~~~v~~ 236 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMG--VQTHIIEMLDRAL--------ITL-EDQDIVNTLLSILK---LNIKFNSPVTE 236 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TTS-CCHHHHHHHHHHHC---CCEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CEEEEEEeCCcCC--------CCC-CCHHHHHHHHhcCE---EEEEECCEEEE
Confidence 4689999999999999999999999 9999999877542 211 02344444444444 66655543311
Q ss_pred ---------EEEec--cc---ccccCEEEEccCC
Q 014990 98 ---------SVSLS--EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~--~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 237 i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 237 VKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp EEEEETTEEEEEECCTTSCCEEEEESCEEECCCE
T ss_pred EEEcCCCcEEEEEEecCCceEEEEcCEEEECcCC
Confidence 13333 22 3478999999998
No 270
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.10 E-value=0.002 Score=60.45 Aligned_cols=82 Identities=17% Similarity=0.222 Sum_probs=57.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. .. .. +.+.+...+++++.++.+..
T Consensus 154 ~~~~v~viG~G~~g~e~a~~l~~~g--~~V~~i~~~~~~~--------~~----~~----l~~~l~~~gv~i~~~~~v~~ 215 (319)
T 3cty_A 154 KGKRVVTIGGGNSGAIAAISMSEYV--KNVTIIEYMPKYM--------CE----NA----YVQEIKKRNIPYIMNAQVTE 215 (319)
T ss_dssp BTSEEEEECCSHHHHHHHHHHTTTB--SEEEEECSSSSCC--------SC----HH----HHHHHHHTTCCEECSEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhC--CcEEEEEcCCccC--------CC----HH----HHHHHhcCCcEEEcCCeEEE
Confidence 4578999999999999999999998 9999999876531 11 12 22233456888877765421
Q ss_pred ---------EEEec---cc---ccccCEEEEccCC
Q 014990 98 ---------SVSLS---EL---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~---~~---~~~~d~lvlAtG~ 117 (415)
.+... ++ ...+|.||+|+|.
T Consensus 216 i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 216 IVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp EEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred EecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 12222 22 2479999999997
No 271
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.04 E-value=0.0018 Score=64.13 Aligned_cols=37 Identities=11% Similarity=-0.134 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCce-EEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQ-VDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~-v~lie~~~~~ 56 (415)
..++|+|||+|+.|+.+|..|++.+ .+ |+++++.+..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~--~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVA--KHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTS--CSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHh--CCcEEEEeCCCCc
Confidence 5688999999999999999999998 88 9999987654
No 272
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.04 E-value=0.0011 Score=64.55 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=30.6
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~ 215 (415)
+|+|+|||+|+.|+.+|..|.+ .....+|+++.+++..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~-------------------~~~~~~Vtlie~~~~~ 39 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKL-------------------ADPSIEVTLIEPNETY 39 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-------------------HCTTSEEEEECSCSSE
T ss_pred cCEEEEECCcHHHHHHHHHHHh-------------------cCcCCeEEEEeCCCCC
Confidence 7999999999999999999875 1122489999887643
No 273
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.03 E-value=0.0005 Score=71.72 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKA------HQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~------g~~~~v~lie~~~~ 55 (415)
.++|||||||.||++||..|++. | .+|+|+|+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG--~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPE--AKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTT--CCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCC--CcEEEEEecCC
Confidence 57999999999999999999997 7 99999999753
No 274
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.02 E-value=0.0013 Score=67.77 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=35.7
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.|+.+++++.++++. . +++.+..|++.+ .|+..++.+|.||.|+|...
T Consensus 140 ~~Gv~i~~g~~V~~v~--~-~~g~~~~V~~~~---------------~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 140 SRGITVHEETPVTDVD--L-SDPDRVVLTVRR---------------GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HTTCEEETTCCEEEEE--C-CSTTCEEEEEEE---------------TTEEEEEEESEEEECCGGGC
T ss_pred hCCCEEEeCCEEEEEE--E-cCCCEEEEEEec---------------CCceEEEEcCEEEECCCCcc
Confidence 4589999999998886 4 345555665542 34445899999999999765
No 275
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.00 E-value=0.0021 Score=67.55 Aligned_cols=90 Identities=13% Similarity=0.061 Sum_probs=64.5
Q ss_pred CCCCeEEEEC--CCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 17 SNPLRVCVVG--SGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 17 ~~~~~VvIIG--gG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
+..++|+||| +|+.|+.+|..|.+.+ .+|+++++.+.+..... .......+.+.+++.+++++.++.
T Consensus 521 ~~g~~VvViG~ggG~~g~e~A~~L~~~g--~~Vtlv~~~~~l~~~~~---------~~~~~~~l~~~l~~~GV~i~~~~~ 589 (690)
T 3k30_A 521 PDGKKVVVYDDDHYYLGGVVAELLAQKG--YEVSIVTPGAQVSSWTN---------NTFEVNRIQRRLIENGVARVTDHA 589 (690)
T ss_dssp CSSSEEEEEECSCSSHHHHHHHHHHHTT--CEEEEEESSSSTTGGGG---------GGTCHHHHHHHHHHTTCEEEESEE
T ss_pred CCCCEEEEEcCCCCccHHHHHHHHHhCC--CeeEEEecccccccccc---------cchhHHHHHHHHHHCCCEEEcCcE
Confidence 4567899999 9999999999999999 99999998876433221 111234556667778999999877
Q ss_pred ece----EEEec-----cc-ccccCEEEEccCC
Q 014990 95 LGS----SVSLS-----EL-RQLYHVVVLAYGA 117 (415)
Q Consensus 95 v~~----~v~~~-----~~-~~~~d~lvlAtG~ 117 (415)
+.. .+... +. ...+|.||+|+|.
T Consensus 590 V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 590 VVAVGAGGVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp EEEEETTEEEEEETTTCCEEEEECSEEEEESCE
T ss_pred EEEEECCeEEEEEccCCeEEEEECCEEEECCCC
Confidence 632 11111 12 3479999999998
No 276
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.99 E-value=0.00056 Score=71.25 Aligned_cols=36 Identities=17% Similarity=0.312 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHH---H-cCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTL---K-AHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~---~-~g~~~~v~lie~~~~ 55 (415)
..++|||||||+||++||..|+ + .| .+|+|+||.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G--~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGG--LKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTT--CCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCC--CeEEEEeCcCC
Confidence 3579999999999999999999 5 78 99999999864
No 277
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.97 E-value=0.0024 Score=59.97 Aligned_cols=82 Identities=16% Similarity=0.129 Sum_probs=58.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
+.++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. +. .. ..+.+++.+++++.+..+..
T Consensus 153 ~~~~v~vvG~g~~~~e~a~~l~~~~--~~v~~~~~~~~~~--------~~----~~----~~~~l~~~gv~~~~~~~v~~ 214 (332)
T 3lzw_A 153 AGRRVAILGGGDSAVDWALMLEPIA--KEVSIIHRRDKFR--------AH----EH----SVENLHASKVNVLTPFVPAE 214 (332)
T ss_dssp BTCEEEEECSSHHHHHHHHHHTTTB--SEEEEECSSSSCS--------SC----HH----HHHHHHHSSCEEETTEEEEE
T ss_pred CCCEEEEECCCHhHHHHHHHHHhhC--CeEEEEEecCcCC--------cc----HH----HHHHHhcCCeEEEeCceeeE
Confidence 3678999999999999999999998 8999999876531 11 11 12224567899888766522
Q ss_pred --------EEEecc------cccccCEEEEccCC
Q 014990 98 --------SVSLSE------LRQLYHVVVLAYGA 117 (415)
Q Consensus 98 --------~v~~~~------~~~~~d~lvlAtG~ 117 (415)
.+...+ ....+|.||+|+|.
T Consensus 215 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 215 LIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp EECSSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred EecCCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 133332 12479999999997
No 278
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.97 E-value=0.0021 Score=65.42 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=34.5
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCCc
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKSV 347 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p~ 347 (415)
+.|+++++++.++++. . +++.+.++++. +| +++.||.||+|+|..+.
T Consensus 232 ~~Gv~I~~~t~V~~I~--~-~~~~v~gV~l~----------------~G--~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 232 ELGGEIRFSTRVDDLH--M-EDGQITGVTLS----------------NG--EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HTTCEEESSCCEEEEE--E-SSSBEEEEEET----------------TS--CEEECSCEEECCCTTCH
T ss_pred hcCCEEEeCCEEEEEE--E-eCCEEEEEEEC----------------CC--CEEECCEEEECCCCChh
Confidence 4589999999998886 4 34555555442 22 27999999999999884
No 279
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.94 E-value=0.0026 Score=63.44 Aligned_cols=37 Identities=22% Similarity=0.075 Sum_probs=33.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g--~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYG--AKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTT--CSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhC--CeEEEEEECCCC
Confidence 5789999999999999999999999 999999987654
No 280
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.93 E-value=0.0022 Score=61.65 Aligned_cols=137 Identities=17% Similarity=0.241 Sum_probs=76.1
Q ss_pred eEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccCCC------CHHHHHHHHcCC---
Q 014990 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAAC------TAKELREILGIK--- 231 (415)
Q Consensus 161 ~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~~~------~~~~l~~~~~~~--- 231 (415)
.|+|||+|++|+-+|..|++ .| .+|+++.|++.+..+. ....+.+ +..+
T Consensus 6 DViIVGaGpaGl~~A~~La~--------------------~G-~~V~v~Er~~~~~~~~~~g~~l~~~~l~~-l~~~~~~ 63 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK--------------------YG-LKTLMIEKRPEIGSPVRCGEGLSKGILNE-ADIKADR 63 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSSSTTCSCCSCCEEETHHHHH-TTCCCCT
T ss_pred CEEEECcCHHHHHHHHHHHH--------------------CC-CcEEEEeCCCCCCCCCceecccCHHHHHH-cCCCchh
Confidence 59999999999999999997 45 4899999875443221 1222322 2211
Q ss_pred -CeeEEEcccccCCC----------CCcHHhhhchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCC
Q 014990 232 -NLYVHIREDDLIKS----------PTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNER 300 (415)
Q Consensus 232 -~~~~~~~~~~~~~~----------p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~ 300 (415)
.+...+....+... +...........|..+...|...+. +.|+.+++++.++.+. . +
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~---------~~G~~~~~~~~v~~~~--~-~ 131 (397)
T 3oz2_A 64 SFIANEVKGARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA---------KAGADVWVKSPALGVI--K-E 131 (397)
T ss_dssp TTEEEEESEEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHH---------HHTCEEESSCCEEEEE--E-E
T ss_pred hhhhcccceEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHH---------hcCcEEeeeeeeeeee--e-c
Confidence 22333322211100 0000000001123334444444333 5578889988888776 4 3
Q ss_pred CCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 301 SGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 301 ~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
++.+..+.... +++..++.+|+||-|.|...
T Consensus 132 ~~~~~~v~~~~---------------~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 132 NGKVAGAKIRH---------------NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp TTEEEEEEEEE---------------TTEEEEEEEEEEEECCCTTC
T ss_pred cceeeeeeecc---------------cccceEEEEeEEEeCCcccc
Confidence 55554444322 45566899999999999653
No 281
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.87 E-value=0.0018 Score=59.79 Aligned_cols=79 Identities=8% Similarity=-0.034 Sum_probs=56.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
..++|+|||+|+.|+.+|..|.+.+ +|+++++.+. .. ...+.+.+++.+++++. ..+..
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g---~v~~v~~~~~-------~~----------~~~~~~~l~~~gv~i~~-~~v~~ 198 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG---ETTFFTNGIV-------EP----------DADQHALLAARGVRVET-TRIRE 198 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS---EEEEECTTTC-------CC----------CHHHHHHHHHTTCEEEC-SCEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC---cEEEEECCCC-------CC----------CHHHHHHHHHCCcEEEc-ceeee
Confidence 4689999999999999999999984 9999987654 00 12234456667888874 33311
Q ss_pred -----EEEecccc-cccCEEEEccCC
Q 014990 98 -----SVSLSELR-QLYHVVVLAYGA 117 (415)
Q Consensus 98 -----~v~~~~~~-~~~d~lvlAtG~ 117 (415)
.+...++. ..+|.||+|+|.
T Consensus 199 i~~~~~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 199 IAGHADVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EETTEEEEETTSCEEEESEEEECCEE
T ss_pred eecCCeEEeCCCCEEEEEEEEEccCc
Confidence 34444443 479999999998
No 282
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.87 E-value=0.002 Score=63.53 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=29.7
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
|+|+|||+|+.|+.+|..|.+ .....+|+++.+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~-------------------~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRN-------------------LMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-------------------HCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhc-------------------cCcCCeEEEEcCCCC
Confidence 789999999999999999985 123358999998864
No 283
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.85 E-value=0.0035 Score=58.43 Aligned_cols=36 Identities=28% Similarity=0.248 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
+.++|+|||||+.|+.+|..|++.+ .+|+|+++.+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G--~~Vt~v~~~~~ 186 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYG--SKVIILHRRDA 186 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTS--SEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhC--Ceeeeeccccc
Confidence 5689999999999999999999999 99999997543
No 284
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.83 E-value=0.00061 Score=71.30 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=34.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC------CceEEEEcCCC-CC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQ------EAQVDIIDRLP-TP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~------~~~v~lie~~~-~~ 56 (415)
..++|+|||||++|+++|..|.+.+. .++|+|+|+.+ .+
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 35789999999999999999998762 27999999998 88
No 285
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.81 E-value=0.0049 Score=62.74 Aligned_cols=37 Identities=22% Similarity=0.305 Sum_probs=34.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...++|+|||+|..|+.+|..|++.+ .+|++|++.+.
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~--~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEV--EHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTC--SEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHHhhC--CEEEEEECCCC
Confidence 45789999999999999999999998 99999999865
No 286
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.78 E-value=0.0036 Score=61.59 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=28.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
...+|+|||+|.+|+.+|..|++ .| .+|+++.+.+.
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~--------------------~G-~~V~llEk~~~ 61 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGK--------------------RG-RRVLVIDHARA 61 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--------------------CC-CcEEEEeCCCC
Confidence 45689999999999999999986 34 47899988753
No 287
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.78 E-value=0.002 Score=62.99 Aligned_cols=37 Identities=24% Similarity=0.178 Sum_probs=28.8
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
++|+|||+|.+|+.+|..|.+. .....+|+++.+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~------------------~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRL------------------VGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH------------------HGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhh------------------CCCCCeEEEEeCCCC
Confidence 5799999999999999998740 002258999998864
No 288
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.74 E-value=0.0011 Score=67.59 Aligned_cols=37 Identities=27% Similarity=0.517 Sum_probs=33.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...+++||||+|++|+.+|.+|.+.+ .+|+|+|++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g--~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAG--KKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCCC
Confidence 35689999999999999999999998 99999999864
No 289
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.72 E-value=0.0071 Score=61.22 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=58.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhc-cCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQH-ERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~ 96 (415)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ..+.+.+.. .+++++.++.+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g--~~Vtlv~~~~~l~--------~~--------~~l~~~l~~~~gV~v~~~~~v~ 415 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIV--EHVTLLEFAPEMK--------AD--------QVLQDKVRSLKNVDIILNAQTT 415 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHB--SEEEEECSSSSCC--------SC--------HHHHHHHTTCTTEEEECSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhC--CEEEEEEeCcccC--------cC--------HHHHHHHhcCCCcEEEeCCEEE
Confidence 4679999999999999999999998 9999999876532 11 123334444 588888876552
Q ss_pred e---------EEEecc---c---ccccCEEEEccCC
Q 014990 97 S---------SVSLSE---L---RQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~---------~v~~~~---~---~~~~d~lvlAtG~ 117 (415)
. .+...+ + ...+|.||+|+|.
T Consensus 416 ~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 416 EVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp EEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred EEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 1 122221 2 2468999999997
No 290
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.70 E-value=0.0091 Score=58.20 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=28.6
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
.+|+|||+|.+|+-+|..|++ .| .+|+++.+..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~--------------------~G-~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK--------------------SG-FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--------------------TT-CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh--------------------CC-CCEEEEeCCC
Confidence 579999999999999999986 35 4899998874
No 291
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.66 E-value=0.003 Score=62.64 Aligned_cols=140 Identities=19% Similarity=0.151 Sum_probs=75.6
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcccC---CC----CHHHHHHHHc-CC
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA---AC----TAKELREILG-IK 231 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~~~---~~----~~~~l~~~~~-~~ 231 (415)
.+|+|||+|.+|+-+|..|++ .| .+|+++.+...... .+ ....+.++-- .+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~--------------------~G-~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~ 65 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR--------------------RG-LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYP 65 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS--------------------SS-CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCC
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CC-CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCC
Confidence 579999999999999999986 34 48999998754311 11 1233333210 00
Q ss_pred ---CeeEEEcccccCCCCCcH--Hhh---hchHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeccccccccccCCCCCC
Q 014990 232 ---NLYVHIREDDLIKSPTDE--EEM---KNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGH 303 (415)
Q Consensus 232 ---~~~~~~~~~~~~~~p~~~--~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~ 303 (415)
.....+....+. .|... ... .....+..+.+.|..... +.|+++++++.++++. . +++.
T Consensus 66 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~---------~~gv~i~~~~~v~~i~--~-~~~~ 132 (453)
T 3atr_A 66 KGEELENKINGIKLY-SPDMQTVWTVNGEGFELNAPLYNQRVLKEAQ---------DRGVEIWDLTTAMKPI--F-EDGY 132 (453)
T ss_dssp CGGGEEEEEEEEEEE-CTTSSCEEEEEEEEEEECHHHHHHHHHHHHH---------HTTCEEESSEEEEEEE--E-ETTE
T ss_pred chHHHHhhhcceEEE-CCCCceEEeECCCcEEEcHHHHHHHHHHHHH---------HcCCEEEeCcEEEEEE--E-ECCE
Confidence 011111111110 01000 000 001123334444444432 4578999999888886 4 3555
Q ss_pred eeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 304 VSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 304 v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.++++... .+|+..++.+|.||.|+|..+
T Consensus 133 v~gv~~~~~-------------~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 133 VKGAVLFNR-------------RTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEEEEEET-------------TTTEEEEEECSEEEECCGGGC
T ss_pred EEEEEEEEc-------------CCCceEEEEcCEEEECcCCch
Confidence 555555320 024445799999999999765
No 292
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.65 E-value=0.0091 Score=61.14 Aligned_cols=50 Identities=14% Similarity=0.195 Sum_probs=37.3
Q ss_pred ceeEEEEeccccccccccCCCC-CCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERS-GHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~-~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.|+++++++.+++++ . ++ +.+.++.+.+. +|+..++.+|.||+|+|...
T Consensus 267 ~~gv~i~~~~~v~~l~--~-~~~g~v~Gv~~~~~--------------~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 267 KRNIDLRMNTRGIEVL--K-DDKGTVKGILVKGM--------------YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HTTCEEESSEEEEEEE--E-CTTSCEEEEEEEET--------------TTEEEEEECSEEEECCCCCT
T ss_pred hcCCEEEeCCEeeEeE--E-cCCCeEEEEEEEeC--------------CCcEEEEECCeEEEeCCCcc
Confidence 5589999999999987 4 34 77777766431 34455799999999999754
No 293
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.63 E-value=0.0083 Score=59.69 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTP 56 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~~ 56 (415)
...++|+|||||..|+-+|..+.+.+ . +|+++++.+..
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~G--a~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQG--ATSVKCLYRRDRK 300 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTT--CSEEEEECSSCST
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcC--CCEEEEEEeCCcc
Confidence 45789999999999999999999998 6 59999887653
No 294
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.56 E-value=0.0081 Score=57.24 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=29.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
...|+|||+|.+|+-+|..|++ .....+|.++.+...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~-------------------~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLST-------------------LRPDLRITIVEAGVA 115 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-------------------HCTTSCEEEEESSSS
T ss_pred cCCEEEECccHHHHHHHHHHHh-------------------cCCCCEEEEEeCCCc
Confidence 3579999999999999999986 112357999988753
No 295
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.53 E-value=0.011 Score=60.35 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=33.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|+|||+|+.|+.+|..|++.+ .+|++|++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~--~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQA--EQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHB--SEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhC--CEEEEEECCCC
Confidence 5789999999999999999999998 99999999875
No 296
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.49 E-value=0.0011 Score=67.41 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
..+++||||+|+||+.+|.+|++ + .+|+|+|++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g--~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-K--YKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-T--SCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-C--CcEEEEecCCCc
Confidence 56899999999999999999999 8 999999998653
No 297
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.44 E-value=0.0037 Score=63.68 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=33.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...++|+|||+|+.|+.+|..|++.+ .+|++|++.+.
T Consensus 183 ~~~krV~VIG~G~tgve~a~~la~~~--~~Vtv~~r~~~ 219 (545)
T 3uox_A 183 FTGKRVGVIGTGATGVQIIPIAAETA--KELYVFQRTPN 219 (545)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHTTTB--SEEEEEESSCC
T ss_pred cCCCeEEEECCCccHHHHHHHHHhhC--CEEEEEEcCCC
Confidence 35789999999999999999999998 99999999875
No 298
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.42 E-value=0.018 Score=58.93 Aligned_cols=50 Identities=16% Similarity=0.200 Sum_probs=37.2
Q ss_pred ceeEEEEeccccccccccCCCC-CCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERS-GHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~-~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.||++++++.+++++ . ++ +.+.+|.+.+. +|+..++.+|.||+|+|..+
T Consensus 267 ~~gv~i~~~t~v~~l~--~-~~~g~v~GV~~~~~--------------~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 267 KRGTDIRLNSRVVRIL--E-DASGKVTGVLVKGE--------------YTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HTTCEEESSEEEEEEE--E-C--CCEEEEEEEET--------------TTEEEEEECSEEEECCCCCT
T ss_pred HcCCeEEecCEEEEEE--E-CCCCeEEEEEEEeC--------------CCcEEEEEcCEEEEeCCCCc
Confidence 5589999999999986 4 34 67777766431 35555799999999999665
No 299
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.39 E-value=0.003 Score=62.55 Aligned_cols=78 Identities=17% Similarity=0.143 Sum_probs=52.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
+.++|+|||.|.+|+++|..|.++| ++|+++|..... +.. ..++ .++++..+...
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G--~~v~~~D~~~~~---------~~~-----------~~l~-~G~~~~~g~~~-- 58 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARG--VTPRVMDTRMTP---------PGL-----------DKLP-EAVERHTGSLN-- 58 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTT--CCCEEEESSSSC---------TTG-----------GGSC-TTSCEEESSCC--
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC--CEEEEEECCCCc---------chh-----------HHhh-CCCEEEECCCc--
Confidence 4578999999999999999999999 999999976642 110 2234 56666544311
Q ss_pred EEEecccccccCEEEEccCCCCCCCCCC
Q 014990 98 SVSLSELRQLYHVVVLAYGAESDRALGI 125 (415)
Q Consensus 98 ~v~~~~~~~~~d~lvlAtG~~~~~~~~i 125 (415)
.+... .+|.||+++|. ++..|.+
T Consensus 59 ---~~~~~-~~d~vV~s~gi-~~~~p~~ 81 (439)
T 2x5o_A 59 ---DEWLM-AADLIVASPGI-ALAHPSL 81 (439)
T ss_dssp ---HHHHH-TCSEEEECTTS-CTTCHHH
T ss_pred ---HHHhc-cCCEEEeCCCC-CCCCHHH
Confidence 11122 68999999997 3333333
No 300
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.38 E-value=0.0089 Score=61.15 Aligned_cols=50 Identities=8% Similarity=0.057 Sum_probs=36.9
Q ss_pred ceeEEEEeccccccccccCCCC-CCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERS-GHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~-~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.|+++++++.+++++ . ++ +.+.++.+.+. +|+...+.+|.||+|+|...
T Consensus 262 ~~gv~i~~~~~v~~l~--~-~~~g~v~Gv~~~~~--------------~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 262 EQGIDTRLNSRVVKLV--V-NDDHSVVGAVVHGK--------------HTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HTTCCEECSEEEEEEE--E-CTTSBEEEEEEEET--------------TTEEEEEEEEEEEECCCCCT
T ss_pred hcCCEEEeCCEEEEEE--E-CCCCcEEEEEEEeC--------------CCcEEEEEcCEEEEecCCcc
Confidence 4579999999999887 4 34 67777766431 34445799999999999654
No 301
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.36 E-value=0.0092 Score=57.71 Aligned_cols=34 Identities=21% Similarity=0.421 Sum_probs=28.4
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
.+|+|||+|.+|+-+|..|.+ .| .+|+++.+...
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~--------------------~G-~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHK--------------------AG-IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------HT-CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHH--------------------CC-CCEEEEeCCCC
Confidence 369999999999999999986 34 47999988753
No 302
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.36 E-value=0.0099 Score=58.85 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=28.0
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
..|+|||+|.+|+-+|..|++ .+ .+|+++.+.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~--------------------~G-~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE--------------------EG-ANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH--------------------CC-CCEEEEECCC
Confidence 479999999999999999986 34 4788988765
No 303
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.34 E-value=0.0047 Score=58.49 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=28.5
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
.+|+|||+|.+|+-+|..|.+ .....+|+++.+...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~-------------------~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAK-------------------NRPDLKVCIIESSVA 101 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHH-------------------HCTTSCEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-------------------cCCCCeEEEEecCcc
Confidence 479999999999999999986 111358999988643
No 304
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.31 E-value=0.0088 Score=63.16 Aligned_cols=67 Identities=15% Similarity=0.062 Sum_probs=48.7
Q ss_pred CCCCeEEEEC--CCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceE
Q 014990 17 SNPLRVCVVG--SGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (415)
Q Consensus 17 ~~~~~VvIIG--gG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
...++|+||| ||+.|+.+|..|++.+ .+|+++++.+ +..... . +.. ...+.+.+++.+++++.++.
T Consensus 526 ~~gk~VvVIG~GgG~~g~e~A~~l~~~G--~~Vtlv~~~~-l~~~~~--~-~~~------~~~~~~~l~~~GV~i~~~~~ 593 (729)
T 1o94_A 526 KIGKRVVILNADTYFMAPSLAEKLATAG--HEVTIVSGVH-LANYMH--F-TLE------YPNMMRRLHELHVEELGDHF 593 (729)
T ss_dssp CCCSEEEEEECCCSSHHHHHHHHHHHTT--CEEEEEESSC-TTHHHH--H-TTC------HHHHHHHHHHTTCEEECSEE
T ss_pred CCCCeEEEEcCCCCchHHHHHHHHHHcC--CEEEEEeccc-cccccc--c-ccc------HHHHHHHHHhCCCEEEcCcE
Confidence 3567999999 9999999999999999 8999999877 432111 1 111 23344556677999988876
Q ss_pred e
Q 014990 95 L 95 (415)
Q Consensus 95 v 95 (415)
+
T Consensus 594 v 594 (729)
T 1o94_A 594 C 594 (729)
T ss_dssp E
T ss_pred E
Confidence 5
No 305
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.31 E-value=0.0024 Score=64.59 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..+|+||||+|+||..+|.+|++.. +.+|+|+|++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~-~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDP-DSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTST-TSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCC-CCeEEEEcCCCC
Confidence 4789999999999999999999732 389999999853
No 306
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.29 E-value=0.0071 Score=60.08 Aligned_cols=74 Identities=19% Similarity=0.119 Sum_probs=53.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (415)
+.++|+|||.|.+|+++|..|.++| ++|++.|..+.. . + ...+.++..++++..+...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~-------~-~----------~~~~~L~~~gi~~~~g~~~-- 65 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFD-------E-N----------PTAQSLLEEGIKVVCGSHP-- 65 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGG-------G-C----------HHHHHHHHTTCEEEESCCC--
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCccc-------C-C----------hHHHHHHhCCCEEEECCCh--
Confidence 5689999999999999999999999 999999976520 0 0 1123345568877655331
Q ss_pred EEEecccccc-cCEEEEccCC
Q 014990 98 SVSLSELRQL-YHVVVLAYGA 117 (415)
Q Consensus 98 ~v~~~~~~~~-~d~lvlAtG~ 117 (415)
.+.... +|.||+++|.
T Consensus 66 ----~~~~~~~~d~vv~spgi 82 (451)
T 3lk7_A 66 ----LELLDEDFCYMIKNPGI 82 (451)
T ss_dssp ----GGGGGSCEEEEEECTTS
T ss_pred ----HHhhcCCCCEEEECCcC
Confidence 122234 8999999998
No 307
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.22 E-value=0.019 Score=55.65 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=28.7
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
.+|+|||+|.+|+-+|..|++ .| .+|+++.++..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~--------------------~G-~~V~viE~~~~ 40 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR--------------------QG-HRVVVVEQARR 40 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHh--------------------CC-CcEEEEeCCCC
Confidence 579999999999999999986 34 47999988743
No 308
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.20 E-value=0.0037 Score=63.06 Aligned_cols=38 Identities=16% Similarity=0.050 Sum_probs=34.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~g 57 (415)
..++++|||+|++|+.+|.+|.+.+ .+|+|+|++...+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~--~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAG--VQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC--CcEEEEeCCCCCC
Confidence 4579999999999999999999988 9999999987543
No 309
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.20 E-value=0.0033 Score=64.43 Aligned_cols=38 Identities=21% Similarity=0.259 Sum_probs=33.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...+++||||||.||+.+|.+|.+.+ ..+|+|+|+++.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~-~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENP-NVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTST-TSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCC-CCcEEEEecCCC
Confidence 35689999999999999999999875 579999999865
No 310
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.19 E-value=0.015 Score=60.71 Aligned_cols=92 Identities=17% Similarity=0.186 Sum_probs=57.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCC-----------------------------------ceEEEEcCCCCCCCccc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQE-----------------------------------AQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~-----------------------------------~~v~lie~~~~~gg~~~ 61 (415)
...++|+|||||+.|+.+|..|++.+.. .+|+++++.+...+.
T Consensus 492 ~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~-- 569 (671)
T 1ps9_A 492 PVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQ-- 569 (671)
T ss_dssp CCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTT--
T ss_pred CCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhcc--
Confidence 3578999999999999999999987611 234444443321100
Q ss_pred cCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece----EEEe-ccc---ccccCEEEEccCC
Q 014990 62 SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS----SVSL-SEL---RQLYHVVVLAYGA 117 (415)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~----~v~~-~~~---~~~~d~lvlAtG~ 117 (415)
.. .......+.+.++..+++++.++.+.. .+.. .++ ...+|.||+|+|.
T Consensus 570 -~l------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 570 -GL------GKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQ 626 (671)
T ss_dssp -TS------CTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCE
T ss_pred -cc------ccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCc
Confidence 00 111223345566777999988876522 1222 233 3579999999998
No 311
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.17 E-value=0.02 Score=57.50 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
...+|+|||+|++|+-+|..|.+ .|. +|+++.|.+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~--------------------~G~-~v~vlE~~~~ 45 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRL--------------------AGV-EVVVLERLVE 45 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCC
Confidence 56789999999999999999996 454 7999988753
No 312
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.08 E-value=0.026 Score=53.54 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=28.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
..+|+|||+|.+|+-+|..|++ .| .+|+++.+..
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~--------------------~G-~~V~vlE~~~ 37 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA--------------------GG-HEVLVAEAAE 37 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh--------------------CC-CeEEEEeCCC
Confidence 3579999999999999999996 34 4788888864
No 313
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=96.06 E-value=0.016 Score=55.79 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCcc
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~~ 215 (415)
...+|+|||+|.+|+.+|..|.+ .| .+|+++.++...
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~--------------------~G-~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQ--------------------NG-WDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--------------------CC-CCEEEEecCCCC
Confidence 35789999999999999999996 34 489999987543
No 314
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.06 E-value=0.006 Score=56.97 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
..++|+|||||+.|+.+|..|++.+ .+|+|+++.+.+
T Consensus 144 ~~k~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 144 KNKRLFVIGGGDSAVEEGTFLTKFA--DKVTIVHRRDEL 180 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTC--SEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEeccccc
Confidence 3579999999999999999999999 999999987653
No 315
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.06 E-value=0.0068 Score=66.08 Aligned_cols=78 Identities=13% Similarity=0.122 Sum_probs=57.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEece-
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 97 (415)
.++|+|||+|+.|+.+|..|++.+ .+|+|+++.+.+. + . .+.+++.+++++.++.+..
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G--~~Vtvv~~~~~~~--------~------~-----~~~l~~~GV~v~~~~~v~~i 342 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATG--GVVAVIDARSSIS--------A------A-----AAQAVADGVQVISGSVVVDT 342 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGT--CCSEEEESCSSCC--------H------H-----HHHHHHTTCCEEETEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcC--CcEEEEECCCccc--------h------h-----HHHHHhCCeEEEeCCEeEEE
Confidence 478999999999999999999999 8899999877541 0 1 2345667888887765421
Q ss_pred ---------EEEecc-------c---ccccCEEEEccCC
Q 014990 98 ---------SVSLSE-------L---RQLYHVVVLAYGA 117 (415)
Q Consensus 98 ---------~v~~~~-------~---~~~~d~lvlAtG~ 117 (415)
.+...+ + ...+|.||+|+|.
T Consensus 343 ~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 343 EADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp EECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred eccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 122222 2 3479999999997
No 316
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.03 E-value=0.015 Score=57.40 Aligned_cols=91 Identities=11% Similarity=0.019 Sum_probs=57.2
Q ss_pred CeEEEECCCHHH------HHHH----HHHHHcCC--Cce-EEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccC
Q 014990 20 LRVCVVGSGPAG------FYTA----EKTLKAHQ--EAQ-VDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHER 86 (415)
Q Consensus 20 ~~VvIIGgG~AG------l~aA----~~L~~~g~--~~~-v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (415)
.+++|||+|+.| +..| ..+++.+. ..+ |+++++.+.++.... +... +....+.+.+++.+
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l----~~~~---~~~~~~~~~l~~~g 222 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGI----QGVG---DSKGILTKGLKEEG 222 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTT----TCCT---THHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCcccccccc----Ccch---HHHHHHHHHHHHCC
Confidence 457899997653 5555 66677771 123 999999887654322 2221 23456667778889
Q ss_pred eEEEeceEece----EEEec----------ccccccCEEEEccCC
Q 014990 87 CSFFGNVTLGS----SVSLS----------ELRQLYHVVVLAYGA 117 (415)
Q Consensus 87 ~~~~~~~~v~~----~v~~~----------~~~~~~d~lvlAtG~ 117 (415)
++++.+..+.. .+... .....+|.+++|+|.
T Consensus 223 I~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 223 IEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp CEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred CEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 99998876632 12222 123479999999985
No 317
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.02 E-value=0.018 Score=58.31 Aligned_cols=35 Identities=29% Similarity=0.431 Sum_probs=29.6
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
..+|+|||+|.+|+-+|..|.+ .|. +|+++.|+..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~--------------------~G~-~v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR--------------------QGV-RVLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT--------------------TTC-CEEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCC
Confidence 4689999999999999999996 454 7999988753
No 318
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.01 E-value=0.0054 Score=61.92 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=33.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...++++|||+|++|+.+|.+|.+.+ .+|+|+|++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~--~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAG--IPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCC--CcEEEEECCCC
Confidence 35689999999999999999999987 99999999864
No 319
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.01 E-value=0.0099 Score=56.15 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|+|||+|+.|+.+|..|++.+ +|+++.+..
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~---~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA---ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS---EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC---CEEEEECCC
Confidence 4689999999999999999999986 599998773
No 320
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.97 E-value=0.021 Score=55.66 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=28.3
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
.+|+|||+|++|+.+|..+++ .| .+|+++.+.+.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~--------------------~G-~~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK--------------------LG-KSVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh--------------------CC-CCEEEEeCCCC
Confidence 469999999999999999986 34 47889888753
No 321
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=95.97 E-value=0.024 Score=52.76 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=27.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
+.-.|+|||+|+.|+.+|..+++ .+ .+|+++.+..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar--------------------~g-~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGR--------------------AR-KQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHH--------------------CC-CCEEEEeCCC
Confidence 34479999999999999988886 34 5799998764
No 322
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=95.94 E-value=0.011 Score=57.28 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
...+|+|||+|.+|+.+|..|.+ .| .+|+++.+++.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~--------------------~G-~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD--------------------AG-VDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--------------------CC-CCEEEEecCCC
Confidence 35789999999999999999996 35 48999998754
No 323
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.92 E-value=0.04 Score=55.31 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=30.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
...+|+|||+|++|+-+|..|++ .|. +|+++.|.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~--------------------~G~-~v~vlE~~~~ 46 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL--------------------GGV-DVMVLEQLPQ 46 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEECCCC
Confidence 45689999999999999999996 454 7999998743
No 324
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.89 E-value=0.005 Score=63.14 Aligned_cols=37 Identities=19% Similarity=0.298 Sum_probs=32.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+++||||||.||+.+|.+|.+. ++.+|+|+|+++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCC
Confidence 4678999999999999999999875 248999999987
No 325
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.85 E-value=0.013 Score=48.07 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=32.7
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 15 LSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 15 ~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
+..-+.+|+|+|+|.-|...|..|.+.| ++|+++|+.
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~ 39 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASD--IPLVVIETS 39 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESC
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECC
Confidence 3445678999999999999999999999 999999964
No 326
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.82 E-value=0.029 Score=61.56 Aligned_cols=34 Identities=29% Similarity=0.335 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
..+|+|||||+.|+.+|..+.+.| . +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G--~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCG--ARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTT--CSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcC--CCEEEEEEecC
Confidence 559999999999999999999998 7 899999876
No 327
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.80 E-value=0.02 Score=56.31 Aligned_cols=91 Identities=11% Similarity=0.028 Sum_probs=58.7
Q ss_pred CeEEEECCCHHH------HHHH----HHHHHcC--CCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCe
Q 014990 20 LRVCVVGSGPAG------FYTA----EKTLKAH--QEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERC 87 (415)
Q Consensus 20 ~~VvIIGgG~AG------l~aA----~~L~~~g--~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (415)
.+++|||+|+.| +..| ..|++.+ ...+|+++++.+.++.... +... +....+.+.+++.++
T Consensus 143 ~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l----~~~~---~~~~~l~~~l~~~GV 215 (430)
T 3h28_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGV----GGIG---ASKRLVEDLFAERNI 215 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTT----TCST---THHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcccccccc----Ccch---HHHHHHHHHHHHCCC
Confidence 357889998654 5555 5556666 1258999998876643222 1111 244566677888899
Q ss_pred EEEeceEece----EEEecc-----cccccCEEEEccCC
Q 014990 88 SFFGNVTLGS----SVSLSE-----LRQLYHVVVLAYGA 117 (415)
Q Consensus 88 ~~~~~~~v~~----~v~~~~-----~~~~~d~lvlAtG~ 117 (415)
+++.++.+.. .+...+ ....+|.||+|+|.
T Consensus 216 ~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 216 DWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp EEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEE
T ss_pred EEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCC
Confidence 9998877632 233333 23479999999997
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.77 E-value=0.012 Score=47.65 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=29.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|||+|..|..+|..|.+.+ .+|+++|+.
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDID 36 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECC
Confidence 3578999999999999999999998 999999863
No 329
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.74 E-value=0.036 Score=55.76 Aligned_cols=50 Identities=12% Similarity=0.190 Sum_probs=37.7
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecC-eeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCG-MVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D-~vi~atG~~p 346 (415)
+.|+++++++.+++++ .++++.+.+|...+ .++..++.+| .||+|+|-..
T Consensus 214 ~~Gv~i~~~t~v~~L~--~~~~g~v~GV~~~~---------------~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 214 KLGVRAEYDMRVQTLV--TDDTGRVVGIVAKQ---------------YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HTTCEEECSEEEEEEE--ECTTCCEEEEEEEE---------------TTEEEEEEEEEEEEECCCCCT
T ss_pred HcCCEEEecCEeEEEE--ECCCCcEEEEEEEE---------------CCcEEEEEeCCeEEEeCCChh
Confidence 4589999999999987 52257787776643 3445579996 9999999665
No 330
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.70 E-value=0.015 Score=48.49 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=32.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...++|+|+|+|.-|..+|..|.+.| .+|+++|+.+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCH
Confidence 35678999999999999999999998 9999999764
No 331
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.68 E-value=0.038 Score=56.49 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=28.3
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
..|+|||+|.+|+-+|..|.+ .|. +|+++.|...
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~--------------------~G~-~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRA--------------------GGV-GALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEcCCCC
Confidence 479999999999999999996 454 7999988743
No 332
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.66 E-value=0.037 Score=52.32 Aligned_cols=72 Identities=18% Similarity=0.130 Sum_probs=51.2
Q ss_pred CCCeEEEECCCHHHHH-HHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 18 NPLRVCVVGSGPAGFY-TAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~-aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
..++|.|||.|.+|++ +|..|.++| ++|++.|..... + ..+.++..++.+..+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G--~~V~~~D~~~~~---------~-----------~~~~L~~~gi~v~~g~~-- 58 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAG--FEVSGCDAKMYP---------P-----------MSTQLEALGIDVYEGFD-- 58 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTT--CEEEEEESSCCT---------T-----------HHHHHHHTTCEEEESCC--
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCC--CEEEEEcCCCCc---------H-----------HHHHHHhCCCEEECCCC--
Confidence 4678999999999997 788889999 999999976531 1 11224445777764422
Q ss_pred eEEEecccc-cccCEEEEccCC
Q 014990 97 SSVSLSELR-QLYHVVVLAYGA 117 (415)
Q Consensus 97 ~~v~~~~~~-~~~d~lvlAtG~ 117 (415)
.+... ..+|.||+.+|.
T Consensus 59 ----~~~l~~~~~d~vV~Spgi 76 (326)
T 3eag_A 59 ----AAQLDEFKADVYVIGNVA 76 (326)
T ss_dssp ----GGGGGSCCCSEEEECTTC
T ss_pred ----HHHcCCCCCCEEEECCCc
Confidence 12222 368999999998
No 333
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.64 E-value=0.033 Score=57.18 Aligned_cols=62 Identities=11% Similarity=0.100 Sum_probs=36.2
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.|++++++..+.++. .++++.+.+|.+.+.... .+|..... ...+.++.+|.||.|.|...
T Consensus 156 ~~Gv~i~~g~~v~~l~--~~~~g~V~gV~~~~~g~~--~~G~~~~~-~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 156 ALGVEVYPGYAAAEIL--FHEDGSVKGIATNDVGIQ--KDGAPKTT-FERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HTTCEEETTCCEEEEE--ECTTSSEEEEEECCEEEC--TTSCEEEE-EECCCEEECSEEEECCCTTC
T ss_pred HcCCEEEcCCEEEEEE--EcCCCCEEEEEeCCcccc--CCCCcccc-cCCceEEECCEEEEeeCCCc
Confidence 4589999999999886 312456666765431110 01110000 00124799999999999764
No 334
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.64 E-value=0.0086 Score=60.99 Aligned_cols=37 Identities=24% Similarity=0.364 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCCceEEEEcCCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTP 56 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~v~lie~~~~~ 56 (415)
..++++|||+|++|+.+|.+|.+. + .+|+|+|++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~--~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPA--VSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTT--SCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC--CCEEEEecCCcC
Confidence 468999999999999999999997 6 999999998543
No 335
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.57 E-value=0.038 Score=51.78 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=28.2
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
.+|+|||+|.+|+-+|..|++ .| .+|+++.++.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~--------------------~G-~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA--------------------AG-HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH--------------------CC-CcEEEEECCC
Confidence 479999999999999999996 34 3799998874
No 336
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.56 E-value=0.0088 Score=61.49 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~-~g~~~~v~lie~~~~ 55 (415)
..++++|||+|++|+.+|.+|.+ .+ .+|+|+|++..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~--~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPK--IKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTT--CCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCC--CcEEEEecCCc
Confidence 56899999999999999999999 66 99999999854
No 337
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.51 E-value=0.035 Score=53.18 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=28.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
..+|+|||+|.+|+-+|..|++ .| .+|+++.+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~--------------------~G-~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK--------------------RG-EEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH--------------------CC-CeEEEEeCCC
Confidence 4679999999999999999996 34 3688888763
No 338
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.46 E-value=0.04 Score=52.75 Aligned_cols=22 Identities=27% Similarity=0.419 Sum_probs=20.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhc
Q 014990 159 TDTAVILGQGNVALDVARILLR 180 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~ 180 (415)
..+|+|||+|.+|+-+|..|++
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~ 38 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK 38 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHh
Confidence 3589999999999999999996
No 339
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.44 E-value=0.006 Score=62.39 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
.+++||||||.||+.+|.+|.+. ++.+|+|+|+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecCCcc
Confidence 47999999999999999999983 24999999998543
No 340
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.40 E-value=0.065 Score=53.23 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHH--------------------HcCCCc-eEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTL--------------------KAHQEA-QVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~--------------------~~g~~~-~v~lie~~~~ 55 (415)
..++|+|||+|+.|+.+|..|+ +.+ . +|+|+++...
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g--~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSR--VKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCC--CCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCC--CcEEEEEEcCCh
Confidence 4689999999999999999999 455 6 7999998764
No 341
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=95.35 E-value=0.089 Score=51.09 Aligned_cols=36 Identities=28% Similarity=0.267 Sum_probs=30.0
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
..+|+|||+|.+|+-+|..|.+ .|.++|+++.|++.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~--------------------~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ--------------------AGIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--------------------TTCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--------------------CCCCeEEEEECCCC
Confidence 4689999999999999999986 46533999998754
No 342
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.34 E-value=0.021 Score=47.47 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.+++|+|+|+|..|...|..|.+.+ ++|+++|+.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRG--QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECC
Confidence 4578999999999999999999998 999999964
No 343
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.28 E-value=0.021 Score=46.62 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|+|+|.-|.+.|..|.+.| ++|+++|+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECC
Confidence 3568999999999999999999999 999999964
No 344
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=95.26 E-value=0.027 Score=58.15 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=28.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeec
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~ 212 (415)
.-.|+|||+|..|+++|..+++ .| .+|.++.++
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr--------------------~G-~kVlLIEk~ 60 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAAR--------------------MG-QQTLLLTHN 60 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEEESC
T ss_pred cCCEEEECChHHHHHHHHHHHh--------------------CC-CCEEEEeec
Confidence 3579999999999999999996 34 479999886
No 345
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.21 E-value=0.037 Score=55.45 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=29.3
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
..+|+|||+|+.|+.+|..|.+ . .+|+++.+.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~--------------------~--~~V~vie~~~~ 141 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ--------------------Y--LTVALIEERGW 141 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT--------------------T--CCEEEECTTSS
T ss_pred cCCEEEECccHHHHHHHHHHHh--------------------c--CCEEEEeCCCC
Confidence 4579999999999999999996 3 68999998754
No 346
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=95.20 E-value=0.094 Score=53.97 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=28.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeec
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~ 212 (415)
.-.|+|||+|..|+++|..+++ .| .+|.++.++
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr--------------------~G-~kVlLIEk~ 59 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAAR--------------------MG-AKTAMFVLN 59 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEEESC
T ss_pred cCCEEEECCCHHHHHHHHHHHH--------------------CC-CCEEEEEec
Confidence 3579999999999999999996 45 479999886
No 347
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.18 E-value=0.099 Score=51.81 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc--------------------CCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA--------------------HQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~--------------------g~~~~v~lie~~~~ 55 (415)
..++|+|||+|+.|+.+|..|.+. + ..+|+|+++...
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g-~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRG-IQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCC-CCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCC-CcEEEEEecCCh
Confidence 468999999999999999999974 3 249999998764
No 348
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.08 E-value=0.026 Score=52.90 Aligned_cols=52 Identities=21% Similarity=0.187 Sum_probs=33.9
Q ss_pred Cchhhhhhhcc--cccCCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 1 MYKARAWLSRS--FTALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
||.+..++..+ +..+..+.++|.|||.|.-|...|..|++.| ++|+++|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G--~~V~~~dr~~ 54 (310)
T 3doj_A 1 MGSSHHHHHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNG--FKVTVWNRTL 54 (310)
T ss_dssp -----------------CCCSCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSG
T ss_pred CCCcccccccccccCcccccCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCH
Confidence 34555555554 3344556789999999999999999999999 9999999865
No 349
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.95 E-value=0.078 Score=53.76 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=29.3
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
..+|+|||+|.+|+.+|..|.+ .|. +|+++.++..
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~--------------------~G~-~v~iiE~~~~ 50 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRE--------------------LGR-SVHVIETAGD 50 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHh--------------------CCC-CEEEEeCCCC
Confidence 4589999999999999999986 454 8999988753
No 350
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=94.90 E-value=0.11 Score=52.99 Aligned_cols=51 Identities=22% Similarity=0.206 Sum_probs=37.7
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.|+.+++++.++++. . +++.+.++++.+. .+|+..++.+|.||.|+|...
T Consensus 182 ~~G~~i~~~~~V~~l~--~-~~g~v~gV~~~d~-------------~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 182 ARGAVALNYMKVESFI--Y-DQGKVVGVVAKDR-------------LTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HTTCEEEESEEEEEEE--E-ETTEEEEEEEEET-------------TTCCEEEEEEEEEEECCGGGH
T ss_pred HcCCEEEcCCEEEEEE--E-cCCeEEEEEEEEc-------------CCCceEEEECCEEEECCCcch
Confidence 5688999998888887 4 4566666766542 145556899999999999765
No 351
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.90 E-value=0.019 Score=57.15 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..|+|+|+|+|--|.+.|..|...+ ++|++||+.+
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~--~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGEN--NDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTT--EEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCC--CCEEEEECCH
Confidence 5689999999999999999999998 9999999764
No 352
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.87 E-value=0.1 Score=50.47 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
...+|+|||+|.+|+-+|..|.+ .| .+|+++.|++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~--------------------~G-~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQ--------------------NG-IDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT--------------------TT-CEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--------------------CC-CCEEEEeCCCC
Confidence 45789999999999999999996 45 48999998753
No 353
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.85 E-value=0.1 Score=50.60 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
...+|+|||+|.+|+-+|..|++ .| .+|+++.|...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~--------------------~G-~~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQ--------------------SG-IDCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--------------------TT-CEEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--------------------CC-CCEEEEeCCCC
Confidence 45789999999999999999996 45 47999998754
No 354
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.70 E-value=0.033 Score=57.49 Aligned_cols=43 Identities=19% Similarity=0.120 Sum_probs=39.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccc
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~ 61 (415)
+..++|+|||+|..|..+|..|++.| .+|.+||++++.||.+.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g--~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSG--QRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCC--CEEEEEcCCCcccCccc
Confidence 35799999999999999999999999 99999999999888654
No 355
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.67 E-value=0.034 Score=49.49 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=50.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEec
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (415)
-+.++|+|||||..|...+..|.+.| .+|+|+++... + .+..+.+..++.++...-
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~----------~----------~l~~l~~~~~i~~i~~~~-- 84 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVS----------A----------EINEWEAKGQLRVKRKKV-- 84 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCC----------H----------HHHHHHHTTSCEEECSCC--
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCC----------H----------HHHHHHHcCCcEEEECCC--
Confidence 46889999999999999999999999 99999985310 0 122333444565543211
Q ss_pred eEEEecccccccCEEEEccCC
Q 014990 97 SSVSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 97 ~~v~~~~~~~~~d~lvlAtG~ 117 (415)
. ......+|.||.|||.
T Consensus 85 ---~-~~dL~~adLVIaAT~d 101 (223)
T 3dfz_A 85 ---G-EEDLLNVFFIVVATND 101 (223)
T ss_dssp ---C-GGGSSSCSEEEECCCC
T ss_pred ---C-HhHhCCCCEEEECCCC
Confidence 1 1122368999999997
No 356
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=94.58 E-value=0.055 Score=52.13 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=28.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
..+|+|||+|.+|+-+|..|++ ..|..+|+++.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~-------------------~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAK-------------------NHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-------------------HHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-------------------hcCCCcEEEEeCCC
Confidence 4579999999999999999984 02424788888764
No 357
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.53 E-value=0.049 Score=42.40 Aligned_cols=35 Identities=26% Similarity=0.361 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|+|+|..|..++..|.+.| .++|+++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCC
Confidence 3568999999999999999999986 4689999864
No 358
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=94.52 E-value=0.064 Score=54.48 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=28.8
Q ss_pred CeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecCc
Q 014990 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~~ 214 (415)
.+|+|||+|++|+-+|..|.+ .|. +|+++.|.+.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~--------------------~G~-~V~vlEr~~~ 60 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH--------------------RQV-GHLVVEQTDG 60 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCC
Confidence 479999999999999999996 454 7999988753
No 359
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.50 E-value=0.047 Score=46.67 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~v~lie~~ 53 (415)
...+|+|+|+|..|..+|..|.+. | ++|+++|+.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYG--KISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECC
Confidence 456899999999999999999998 9 999999864
No 360
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.48 E-value=0.036 Score=44.86 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=30.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.++|+|+|+|..|..+|..|.+.+ ++|+++|+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--HEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 457999999999999999999998 899999865
No 361
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.38 E-value=0.12 Score=55.41 Aligned_cols=22 Identities=36% Similarity=0.498 Sum_probs=20.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhc
Q 014990 159 TDTAVILGQGNVALDVARILLR 180 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~ 180 (415)
..+|+|||+|.+|+-+|..|++
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~ 25 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVT 25 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHh
Confidence 4679999999999999999996
No 362
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=94.35 E-value=0.058 Score=55.62 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=29.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
..-.|+|||+|..|+++|..+++ .| .+|.++.++.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr--------------------~G-~kVlLIEk~~ 54 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVAR--------------------GG-LHCLLITSDL 54 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--------------------TT-CCEEEEESCG
T ss_pred CcCCEEEECccHHHHHHHHHHHH--------------------CC-CcEEEEEecc
Confidence 34589999999999999999996 45 4799998873
No 363
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.19 E-value=0.17 Score=52.65 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=28.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeec
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~ 212 (415)
...|+|||+|.+|+-+|..|++ .| .+|+++.+.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~--------------------~G-~~V~vlEk~ 304 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLR--------------------RG-WQVTLYCAD 304 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--------------------TT-CEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--------------------CC-CeEEEEeCC
Confidence 3689999999999999999996 34 478888875
No 364
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.97 E-value=0.039 Score=50.76 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+.++|+|||||..|.+.+..|.+.| .+|+||++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~G--a~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTG--CKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGT--CEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCC--CEEEEEcCCC
Confidence 6789999999999999999999999 9999998654
No 365
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.94 E-value=0.047 Score=48.19 Aligned_cols=32 Identities=25% Similarity=0.476 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
++|+|+|+|.-|.+.|..|.+.+ ++|+++|+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g--~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK--YGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--CCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEECC
Confidence 57999999999999999999998 999999953
No 366
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=93.53 E-value=0.13 Score=48.38 Aligned_cols=21 Identities=29% Similarity=0.377 Sum_probs=19.1
Q ss_pred CeEEEEcCChhHHHHHHHHhc
Q 014990 160 DTAVILGQGNVALDVARILLR 180 (415)
Q Consensus 160 k~V~VVG~G~sg~e~a~~L~~ 180 (415)
++|+|||+|.+|+-+|..|.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~ 22 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRR 22 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHS
T ss_pred CcEEEECCcHHHHHHHHHHHh
Confidence 369999999999999999984
No 367
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.52 E-value=0.25 Score=50.77 Aligned_cols=50 Identities=18% Similarity=0.120 Sum_probs=35.1
Q ss_pred cee-EEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccC
Q 014990 280 QRE-LHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYK 345 (415)
Q Consensus 280 ~~~-v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~ 345 (415)
+.+ ++++++..+++++ . +++.+.++...+. .+|+...+.++.||+|+|..
T Consensus 146 ~~gnv~i~~~~~v~~l~--~-~~g~v~Gv~~~~~-------------~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDIL--V-DDGHVRGLVAMNM-------------MEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp TCTTEEEEETEEEEEEE--E-ETTEEEEEEEEET-------------TTTEEEEEECSCEEECCCCC
T ss_pred hCCCcEEEeCCEEEEEE--E-eCCEEEEEEEEEc-------------CCCcEEEEEcCeEEECCCCC
Confidence 456 9999999998887 4 3566666654321 14554579999999999953
No 368
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=93.48 E-value=0.41 Score=48.23 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=28.7
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
..+|+|||||.+|+-+|..|++. + ..| .+|+++.+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~----------------~-~~G-~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRA----------------L-QQQ-ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----------------C-CSS-CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhh----------------c-CCC-CEEEEECCCC
Confidence 46899999999999999999840 0 023 4899999864
No 369
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.47 E-value=0.089 Score=47.40 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=32.5
Q ss_pred ccCCCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 13 TALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 13 ~~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
.......++|.|||+|.-|.+.|..|++.| ++|+++++.+.
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G--~~V~~~~r~~~ 53 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLG--HEVTIGTRDPK 53 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHH
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCChh
Confidence 333457889999999999999999999999 99999998753
No 370
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.45 E-value=0.094 Score=50.87 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...+|+|||+|.+|+.+|..+...| .+|+++|+.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCHH
Confidence 4679999999999999999999999 89999997753
No 371
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.44 E-value=0.084 Score=49.47 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc--eEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~--~v~lie~~ 53 (415)
..++|+|||+|..|.+.|..|++.+ . +|+++|+.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g--~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRG--IAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCC
Confidence 4579999999999999999999998 7 99999865
No 372
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.43 E-value=0.37 Score=48.80 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=29.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
...+|+|||||.+|+-+|..|++. + ..+ .+|+++.+..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~----------------~-~~G-~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKA----------------L-QGT-ADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----------------T-TTS-SEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhh----------------c-CCC-CcEEEEeCCC
Confidence 357899999999999999999850 0 023 4899998864
No 373
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.11 E-value=0.13 Score=48.73 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
.+++|+|||+|..|.+.|..|+..+ + +|+|+|...
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g--~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRE--LADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCh
Confidence 4579999999999999999999988 6 899999654
No 374
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.09 E-value=0.065 Score=53.37 Aligned_cols=51 Identities=18% Similarity=0.069 Sum_probs=38.9
Q ss_pred chhhhhhhcccccCCCCCCeEEEECCCHHHHHHHHHHHHc-CCCc-eEEEEcCCCC
Q 014990 2 YKARAWLSRSFTALSSNPLRVCVVGSGPAGFYTAEKTLKA-HQEA-QVDIIDRLPT 55 (415)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~-g~~~-~v~lie~~~~ 55 (415)
.++-+.+...+.+. ...++|.|||+|+-|+..|..|++. | + +|+++|+.+.
T Consensus 2 ~~~~~~~~~~~~~~-~~~mkIaVIGlG~mG~~lA~~la~~~G--~~~V~~~D~~~~ 54 (478)
T 3g79_A 2 SLSMSKLEKLLKER-GPIKKIGVLGMGYVGIPAAVLFADAPC--FEKVLGFQRNSK 54 (478)
T ss_dssp --CCCHHHHHHHHH-CSCCEEEEECCSTTHHHHHHHHHHSTT--CCEEEEECCCCT
T ss_pred CccHhHHHHHHhhc-CCCCEEEEECcCHHHHHHHHHHHHhCC--CCeEEEEECChh
Confidence 34444444444442 2557899999999999999999999 8 9 9999998875
No 375
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=93.01 E-value=0.51 Score=48.27 Aligned_cols=51 Identities=14% Similarity=0.085 Sum_probs=36.4
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYK 345 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~ 345 (415)
+.|+++++++.+++++ .++++.+.++...+. .+|+...+.++.||+|||..
T Consensus 155 ~~gv~i~~~~~v~~L~--~~~~g~v~Gv~~~~~-------------~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 155 KNHTTIFSEWYALDLV--KNQDGAVVGCTALCI-------------ETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HTTCEEEETEEEEEEE--ECTTSCEEEEEEEET-------------TTCCEEEEEEEEEEECCCCC
T ss_pred hCCCEEEeCcEEEEEE--ECCCCEEEEEEEEEc-------------CCCeEEEEEcCEEEECCCCC
Confidence 4579999999999987 412566777765431 14555579999999999964
No 376
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.96 E-value=0.11 Score=50.07 Aligned_cols=35 Identities=26% Similarity=0.338 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+|+|||+|..|+.+|..+...| .+|+++|+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG--AKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 5679999999999999999999999 8999999774
No 377
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=92.96 E-value=0.4 Score=49.43 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=37.1
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccCC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYKS 346 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~p 346 (415)
+.+++++++..+++++ . +++.+.++...+. .+|+...+.++.||+|||-..
T Consensus 167 ~~gv~i~~~~~v~~Li--~-~~g~v~Gv~~~~~-------------~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 167 RYDTSYFVEYFALDLL--M-ENGECRGVIALCI-------------EDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp TSCCEEEETEEEEEEE--E-ETTEEEEEEEEET-------------TTCCEEEEEEEEEEECCCCCG
T ss_pred hCCCEEEEceEEEEEE--E-ECCEEEEEEEEEc-------------CCCcEEEEEcCeEEECCCccc
Confidence 5689999999999887 4 4566766665431 145555799999999999543
No 378
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.82 E-value=0.14 Score=47.55 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||+|.-|...|..|++.| ++|+++|+.+
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCH
Confidence 4568999999999999999999999 9999999764
No 379
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.78 E-value=0.25 Score=49.40 Aligned_cols=71 Identities=20% Similarity=0.130 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCHHHHH-HHHHHHHcCCCceEEEEcCCCCCCCccccCCCCCCcchHHHHHHHHHHhhccCeEEEeceEe
Q 014990 17 SNPLRVCVVGSGPAGFY-TAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~-aA~~L~~~g~~~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (415)
...++|.|||.|-+|++ +|..|.++| ++|++.|.... ...+.++..++.+..+..
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~---------------------~~~~~l~~~gi~~~~g~~- 75 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPN---------------------SVTQHLTALGAQIYFHHR- 75 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCC---------------------HHHHHHHHTTCEEESSCC-
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCC---------------------HHHHHHHHCCCEEECCCC-
Confidence 45689999999999997 699999999 99999996431 112234556787765421
Q ss_pred ceEEEecccccccCEEEEccCC
Q 014990 96 GSSVSLSELRQLYHVVVLAYGA 117 (415)
Q Consensus 96 ~~~v~~~~~~~~~d~lvlAtG~ 117 (415)
......+|.||+.+|.
T Consensus 76 ------~~~~~~~d~vV~Spgi 91 (494)
T 4hv4_A 76 ------PENVLDASVVVVSTAI 91 (494)
T ss_dssp ------GGGGTTCSEEEECTTS
T ss_pred ------HHHcCCCCEEEECCCC
Confidence 1112368999999998
No 380
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=92.71 E-value=0.28 Score=48.71 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=29.7
Q ss_pred CceeeccCCCCCcccCCeeeeecccc-CC---ccchh----hhhhhHHHHHhhccc
Q 014990 366 GRVLKNISGDSSQVENGLYVCGWLKR-GP---TGIIA----TNLYCAEETVSSLSL 413 (415)
Q Consensus 366 G~i~v~~~~~~~t~~p~vfaiGD~~~-~~---~~~~~----~a~~~g~~~a~~i~~ 413 (415)
|.|.+|.. ++|+.|||||+|||+. +. +.+.. .++..|+.|+.++..
T Consensus 317 GGI~vd~~--~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 317 GGIRVNIR--GESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp CEEECCTT--CBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred CCeEECCC--CccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 44566665 7899999999999975 32 12222 344557777776643
No 381
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.66 E-value=0.14 Score=46.97 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
++|.|||+|.-|.+.|..|.+.| ++|+++++.+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG--HEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC--CCEEEEEcCcc
Confidence 47999999999999999999999 99999998754
No 382
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.66 E-value=0.12 Score=47.86 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.++|.|||+|..|.+.|..|.+.| ++|+++++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGG--NDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC--CcEEEEECC
Confidence 468999999999999999999998 999999864
No 383
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.63 E-value=0.37 Score=50.00 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=36.1
Q ss_pred ceeEEEEeccccccccccCCCCCCeeeEEEeeeeecCCCCCcceeccCCceEEEecCeeEEeeccC
Q 014990 280 QRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEFEDLDCGMVLKSIGYK 345 (415)
Q Consensus 280 ~~~v~~~~~~~~~~v~~~~~~~~~v~~v~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~atG~~ 345 (415)
+.|++++++..+++++ . +++.+.++...+. .+|+...+.++.||+|||-.
T Consensus 170 ~~gv~i~~~~~v~~L~--~-~~g~v~Gv~~~~~-------------~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 170 KLGVSIQDRKEAIALI--H-QDGKCYGAVVRDL-------------VTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHTCEEECSEEEEEEE--E-ETTEEEEEEEEET-------------TTCCEEEEECSEEEECCCCC
T ss_pred hCCCEEEECcEEEEEE--e-cCCEEEEEEEEEC-------------CCCcEEEEEcCEEEEccCcc
Confidence 4579999999998887 4 3566666655321 14555579999999999954
No 384
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.63 E-value=0.15 Score=44.62 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=31.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...++|.|||+|..|.+.|..|.+.+ .+|+++++.+.
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g--~~V~~~~~~~~ 53 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAG--HEVTYYGSKDQ 53 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT--CEEEEECTTCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHH
Confidence 35778999999999999999999999 99999998765
No 385
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.62 E-value=0.087 Score=46.61 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=29.4
Q ss_pred CCcccCCeeeeeccccCCccchhhhhhhHHHHHhhcccc
Q 014990 376 SSQVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSLI 414 (415)
Q Consensus 376 ~~t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~~ 414 (415)
+.++.++||++||+..++ ++ ..|+.+|+.||+.|.+.
T Consensus 290 ~~~~~~~v~l~GDa~~g~-gv-~~A~~sG~~aA~~I~~~ 326 (336)
T 3kkj_A 290 LSDADLGIYVCGDWCLSG-RV-EGAWLSGQEAARRLLEH 326 (336)
T ss_dssp EEETTTTEEECCGGGTTS-SH-HHHHHHHHHHHHHHHHH
T ss_pred eeeCCCCEEEEecccCCc-CH-HHHHHHHHHHHHHHHHH
Confidence 445789999999997654 34 47999999999998753
No 386
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.60 E-value=0.13 Score=48.33 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
++|+|||+|.-|.+.|..|.+.| .+|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG--HCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT--CEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CeEEEEeCC
Confidence 68999999999999999999998 999999864
No 387
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.44 E-value=0.16 Score=46.79 Aligned_cols=34 Identities=26% Similarity=0.123 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
.++|.|||+|.-|...|..|++.| ++|+++|+.+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCH
Confidence 468999999999999999999999 9999999764
No 388
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.18 E-value=0.15 Score=50.81 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||.|+-|+..|..|++.| ++|+++|+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCH
Confidence 4689999999999999999999999 9999999874
No 389
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.14 E-value=0.074 Score=43.51 Aligned_cols=33 Identities=18% Similarity=0.118 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.++|+|||+|..|...|..|.+.+ .+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g--~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ--YKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT--CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEcCC
Confidence 778999999999999999999987 888888854
No 390
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=92.10 E-value=0.21 Score=50.27 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=20.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHhc
Q 014990 158 STDTAVILGQGNVALDVARILLR 180 (415)
Q Consensus 158 ~~k~V~VVG~G~sg~e~a~~L~~ 180 (415)
...+|+|||||.+|+-+|..|++
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~ 28 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAA 28 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHh
Confidence 35789999999999999999985
No 391
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.10 E-value=0.18 Score=48.66 Aligned_cols=36 Identities=31% Similarity=0.326 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...+|+|+|+|.+|+.++..+...| .+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHH
Confidence 5789999999999999999999999 89999997653
No 392
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.08 E-value=0.17 Score=49.19 Aligned_cols=35 Identities=31% Similarity=0.438 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+|+|||+|.+|+.++..+...| .+|+++|+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCH
Confidence 4678999999999999999999999 8999999764
No 393
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.03 E-value=0.084 Score=46.73 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=31.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEE-EcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDI-IDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~l-ie~~~ 54 (415)
+..++|.|||+|.-|.+.|..|.+.+ ++|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g--~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQ--IPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTT--CCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCCH
Confidence 34679999999999999999999998 89988 67543
No 394
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.94 E-value=0.16 Score=48.09 Aligned_cols=33 Identities=27% Similarity=0.560 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.++|+|||+|.-|.+.|..|++.| .+|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g--~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAG--EAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTT--CCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CEEEEEECh
Confidence 478999999999999999999999 899999853
No 395
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.88 E-value=0.17 Score=48.45 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+..++|.|||+|.-|.+.|..|++.| ++|+++++.+
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKG--QKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCH
Confidence 34679999999999999999999999 9999999763
No 396
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.85 E-value=0.21 Score=47.14 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
.+++|+|||+|..|...|..|+..+ + +|+|+|...
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g--~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKD--LGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCH
Confidence 3468999999999999999999998 7 899999654
No 397
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.79 E-value=0.22 Score=46.69 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
..++|+|||+|..|.+.|..|++.+ + +|+++|+.+
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g--~~~V~l~D~~~ 38 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDN--LADVVLFDIAE 38 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCc
Confidence 3578999999999999999999998 7 899999754
No 398
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.72 E-value=0.2 Score=49.24 Aligned_cols=38 Identities=24% Similarity=0.148 Sum_probs=33.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..+..+|+|||.|+.|+..|..|++.| ++|+.+|-.+.
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G--~~V~g~Did~~ 55 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLG--HRVVGYDVNPS 55 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCC--CcEEEEECCHH
Confidence 346779999999999999999999999 99999998743
No 399
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.72 E-value=0.29 Score=44.27 Aligned_cols=36 Identities=19% Similarity=0.077 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+|+|||+|-.|..+|..|++.| -.+++|+|...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~G-vg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAG-VGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTT-CSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcC-CCeEEEEeCCC
Confidence 4679999999999999999999999 23899998763
No 400
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.72 E-value=0.19 Score=46.91 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCc--eEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~--~v~lie~~ 53 (415)
++|+|||+|..|.+.|..|+..+ + +|+++|..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g--~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG--SCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCC
Confidence 47999999999999999999998 6 99999965
No 401
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.71 E-value=0.23 Score=49.04 Aligned_cols=37 Identities=19% Similarity=0.081 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..-++|.|||+|.-|...|..|++.| ++|+++|+.+.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAG--IETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECcHH
Confidence 34578999999999999999999999 99999998764
No 402
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.70 E-value=0.21 Score=47.64 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
+++|+|+|||..|..++..+++.| ++++++|..+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G--~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAG--MKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCCC
Confidence 478999999999999999999999 99999998754
No 403
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.69 E-value=0.18 Score=49.87 Aligned_cols=34 Identities=32% Similarity=0.348 Sum_probs=31.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
++|.|||+|.-|+..|..|++.| ++|+++|+.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHH
Confidence 68999999999999999999999 99999998743
No 404
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.69 E-value=0.2 Score=47.90 Aligned_cols=35 Identities=31% Similarity=0.401 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+..+|+|+|+|.+|..++..|+..| .+|+++|+.+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~ 200 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINV 200 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCH
Confidence 3489999999999999999999999 8999998653
No 405
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.68 E-value=0.19 Score=48.32 Aligned_cols=36 Identities=31% Similarity=0.527 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
-..-+|||+|+|.||+.+|..|...| . +|+++|++-
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~G--a~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAG--ATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHT--CCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcC--CCeEEEEECCC
Confidence 35678999999999999999999999 7 999999873
No 406
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.66 E-value=0.2 Score=47.55 Aligned_cols=33 Identities=21% Similarity=0.048 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.++|+|||+|..|...|..|.+.| ++|+++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g--~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG--QSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC--CEEEEEeCC
Confidence 478999999999999999999998 999999864
No 407
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=91.64 E-value=0.53 Score=44.71 Aligned_cols=36 Identities=22% Similarity=0.213 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+|+|||+|-.|..+|..|++.| -.+++|+|...
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~G-vg~itlvD~d~ 70 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAG-VKGLTMLDHEQ 70 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcC-CCEEEEEECCC
Confidence 4678999999999999999999999 23899999763
No 408
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.62 E-value=0.18 Score=49.95 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
+.++|+|||||..|.+.+..|.+.| .+|+++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~g--a~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAG--ARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTT--BEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCc--CEEEEEcCC
Confidence 5789999999999999999999999 999999985
No 409
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.54 E-value=0.2 Score=45.27 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
...+|+|||+|-.|..+|..|++.| . +++|+|+..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~G--v~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAG--VGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcC--CCeEEEEcCCC
Confidence 4678999999999999999999999 6 899999874
No 410
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.54 E-value=0.2 Score=48.04 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=32.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~ 53 (415)
-...+|||+|+|.||..+|..|...| . +|+++|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G--~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLG--VKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHT--CCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECC
Confidence 36789999999999999999999998 7 89999986
No 411
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.47 E-value=0.15 Score=47.71 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=29.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
++|+|||+|.-|.+.|..|.+.| .+|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSG--EDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTS--CCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCC--CeEEEEEcC
Confidence 67999999999999999999998 899999864
No 412
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.43 E-value=0.2 Score=44.03 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=29.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
...++|.|||+|..|.+.|..|.+.+ ++|+++++.
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~~g--~~V~~~~r~ 60 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVGSG--FKVVVGSRN 60 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESS
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 35678999999999999999999998 899999864
No 413
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.41 E-value=0.23 Score=45.38 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|+|+|+|+.|...+..|.+.| ++|+++++...
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQG--HEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT--CCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCcc
Confidence 3578999999999999999999999 99999988753
No 414
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=91.39 E-value=0.51 Score=48.80 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=28.0
Q ss_pred CCeEEEEcCChhHHHHHHHHhcCcccccccCchhHHHHHhhcCCcceEEEEeecC
Q 014990 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (415)
Q Consensus 159 ~k~V~VVG~G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~r~~ 213 (415)
...|+|||+|++|+-+|..|++ ..|. +|+++.|.+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~-------------------~~G~-~V~viEr~~ 66 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAA-------------------FPDI-RTCIVEQKE 66 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTT-------------------CTTS-CEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHH-------------------hCCC-CEEEEeCCC
Confidence 3579999999999999999984 0243 788988874
No 415
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.18 E-value=0.23 Score=46.62 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++++|+|||+|..|.++|..|+..+...+++|+|...
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4578999999999999999999988223899999653
No 416
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.16 E-value=0.64 Score=44.25 Aligned_cols=36 Identities=17% Similarity=0.212 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+|+|||+|-.|..+|..|++.| -.+++|+|...
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSG-IGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCC-CCeEEEECCCc
Confidence 4778999999999999999999999 34899999763
No 417
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.16 E-value=0.25 Score=45.92 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||.|.-|...|..|++.| ++|+++|+.+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG--LSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CeEEEEECCH
Confidence 4578999999999999999999999 9999998764
No 418
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.15 E-value=0.23 Score=46.69 Aligned_cols=35 Identities=29% Similarity=0.205 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+|.|||+|.-|..-|..++..| ++|+|+|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCC--CeEEEEECCH
Confidence 4678999999999999999999999 9999999764
No 419
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.12 E-value=0.22 Score=46.79 Aligned_cols=36 Identities=19% Similarity=0.402 Sum_probs=32.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+..++|.|||.|.-|...|..|++.| ++|+++|+.+
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAG--YALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTT--CEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCC--CeEEEEcCCH
Confidence 34679999999999999999999999 9999999764
No 420
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.02 E-value=0.23 Score=46.64 Aligned_cols=35 Identities=29% Similarity=0.205 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||+|.-|.+.|..|++.| ++|+++|+.+
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 4578999999999999999999999 9999999764
No 421
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.01 E-value=0.27 Score=44.92 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|+|+|-+|.++|..|++.| .+|++++|.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G--~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLD--CAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcC--CEEEEEECC
Confidence 5678999999999999999999999 899999865
No 422
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.87 E-value=0.27 Score=47.13 Aligned_cols=34 Identities=35% Similarity=0.486 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|+|+|..|..+|..|+..| .+|+++|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G--a~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG--AQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECC
Confidence 4689999999999999999999999 899999854
No 423
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.83 E-value=0.3 Score=46.04 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=30.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
...++|+|||+|..|.++|..|+..+-..+++++|..
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3567899999999999999999998821289999853
No 424
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.81 E-value=0.31 Score=44.80 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.4
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 20 LRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
|+|+|.|| |+.|-.++..|.++| ++|+++.|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G--~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG--HEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCC
Confidence 68999998 999999999999999 99999988754
No 425
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.77 E-value=0.29 Score=45.79 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|+|||+|..|.+.|..|++.+...+|+++|+..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 47999999999999999999852238999999764
No 426
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.73 E-value=0.33 Score=45.65 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=30.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
.++|+|||+|..|...|..|+..+ + +|+|+|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g--~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKN--LGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCH
Confidence 468999999999999999999998 6 899999653
No 427
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.69 E-value=0.18 Score=46.71 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|+|||+|.-|.+.|..|.+.| .+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g--~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSL--PHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHC--TTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCC--CeEEEEEecc
Confidence 68999999999999999999999 8999999874
No 428
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.63 E-value=0.31 Score=42.28 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.9
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
|+|+|+|| |..|..++..|.+.| ++|++++|.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCc
Confidence 57999996 999999999999999 9999998753
No 429
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.63 E-value=0.32 Score=45.59 Aligned_cols=35 Identities=26% Similarity=0.251 Sum_probs=31.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~ 53 (415)
++.++|.|||+|..|.+.|..|+..+ + +|+|+|..
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g--~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKE--LADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEecc
Confidence 35678999999999999999999998 7 99999965
No 430
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.56 E-value=0.22 Score=48.99 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|.|||+|..|+..|..|++.| ++|+++|+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG--HEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCH
Confidence 47999999999999999999999 9999999864
No 431
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.54 E-value=0.34 Score=45.62 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=31.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
++.++|+|||+|..|.++|..|+..+ . +++|+|..+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~--~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKE--LGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCc
Confidence 35679999999999999999999998 6 999999654
No 432
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.54 E-value=0.32 Score=45.83 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcC
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR 52 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~ 52 (415)
+...++|+|||+|..|.++|..|+..+-..+++|+|.
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 3467899999999999999999999882228999985
No 433
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.50 E-value=0.26 Score=46.29 Aligned_cols=39 Identities=21% Similarity=0.170 Sum_probs=31.4
Q ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCCCC
Q 014990 16 SSNPLRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (415)
Q Consensus 16 ~~~~~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~~~ 56 (415)
..+.++|+|.|| |+-|..++..|++.| ++|+++++....
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~ 55 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQG--RTVRGFDLRPSG 55 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTT--CCEEEEESSCCS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCC--CEEEEEeCCCCC
Confidence 346789999998 999999999999999 999999987643
No 434
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.48 E-value=0.29 Score=48.01 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++|.|||.|+-|+..|..|++ | ++|+++|+.+.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G--~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-N--HEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-T--SEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-C--CeEEEEecCHH
Confidence 56799999999999999999998 8 99999998753
No 435
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.48 E-value=0.31 Score=46.91 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|||+|..|..+|..+...| .+|+++|+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG--ATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCC
Confidence 5789999999999999999999999 899999864
No 436
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.47 E-value=0.36 Score=44.15 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
.++++|||+|-+|-+++..|.+.| .+|+|++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--LQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 789999999999999999999999 9999998764
No 437
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.41 E-value=0.32 Score=44.73 Aligned_cols=34 Identities=29% Similarity=0.383 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
++|.|||.|..|...|..|++.| ++|+++|+.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG--CSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCC--CeEEEEcCCHH
Confidence 68999999999999999999999 99999998753
No 438
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.33 E-value=0.34 Score=42.84 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 17 SNPLRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...++|+|+|| |.-|..++..|++.| ++|++++|..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G--~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCC--CeEEEEECCh
Confidence 35789999998 999999999999999 9999998753
No 439
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.31 E-value=0.29 Score=48.82 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||.|.-|+..|..|++.+++++|+++|+..
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3578999999999999999999994349999999864
No 440
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.31 E-value=0.38 Score=45.19 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=31.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
+..++|.|||+|..|.++|..|+..+ . +++|+|..+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~--~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQ--LGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCh
Confidence 34679999999999999999999988 5 999999654
No 441
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.20 E-value=0.32 Score=42.33 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=29.3
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 20 LRVCVVG-SGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIG-gG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
++|+||| +|..|.+.|..|.+.+ ++|+++++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g--~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG--HEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT--CEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 4799999 9999999999999998 899999865
No 442
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.18 E-value=0.33 Score=45.25 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=28.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
++|+|||+|.-|.+.|..|. .+ .+|+++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g--~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LY--HDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT--SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cC--CceEEEECC
Confidence 68999999999999999999 88 999999865
No 443
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.17 E-value=0.33 Score=45.09 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~ 53 (415)
..++|+|||+|.+|.++|..|.+.| . +|++++|.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G--~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTA--AERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 5679999999999999999999998 7 89999865
No 444
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.17 E-value=0.27 Score=45.49 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+.++|.|||.|..|...|..|.+.| ++|+++|+.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~d~~~ 36 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQ 36 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC--CeEEEEcCCH
Confidence 3578999999999999999999999 9999998754
No 445
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.17 E-value=0.42 Score=40.89 Aligned_cols=33 Identities=21% Similarity=0.440 Sum_probs=30.8
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|+|+|| |.-|.+++..|.+.+ ++|+++++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCh
Confidence 78999999 999999999999999 9999999864
No 446
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.12 E-value=0.35 Score=42.12 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=29.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 20 LRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
|+|+|+|| |..|..++..|.+.| ++|+++.|.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG--HEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC--CEEEEEEec
Confidence 47999998 999999999999999 999999875
No 447
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.09 E-value=0.26 Score=47.87 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|.|||+|..|+..|..|++ | ++|+++|+.+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G--~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q--NEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T--SEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-C--CEEEEEECCH
Confidence 479999999999999999999 8 9999999864
No 448
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.08 E-value=0.33 Score=44.18 Aligned_cols=34 Identities=12% Similarity=-0.011 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
.++|+|+|+|+-|...+..|.+.| ++|+++.+.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQG--WRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGT--CEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCC--CEEEEEEcCh
Confidence 478999999999999999999999 9999998754
No 449
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.03 E-value=0.3 Score=47.69 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
...+|+|||.|.-|...|..|.+.+ ++|++||+.+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCH
Confidence 4578999999999999999999999 9999999763
No 450
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.00 E-value=0.31 Score=45.69 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCc--eEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~--~v~lie~~ 53 (415)
++|+|||+|..|.+.|..|++.+ + +|+++|+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g--~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG--FAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCeEEEEeCC
Confidence 47999999999999999999998 7 99999864
No 451
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.95 E-value=0.36 Score=46.15 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=32.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
.+.++|.|||.|.-|...|..|.+.| ++|+++|+.+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCH
Confidence 35689999999999999999999999 9999999874
No 452
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.92 E-value=0.3 Score=45.79 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR 52 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~ 52 (415)
++|.|||+|..|.+.|..|.+.| ++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g--~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG--NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC--CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CeEEEEEc
Confidence 47999999999999999999999 99999987
No 453
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.85 E-value=0.36 Score=45.46 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.++|.|||+|.-|...|..|.+.| ++|+++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G--~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG--EEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CeEEEEeCC
Confidence 578999999999999999999999 999999875
No 454
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.71 E-value=0.39 Score=44.53 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||+|.-|...|..|+ .| ++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG--~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SK--HEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cC--CEEEEEECCH
Confidence 5789999999999999999999 98 9999999764
No 455
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.70 E-value=0.42 Score=44.65 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
++|+|||+|..|...|..|+..+ . +|+|+|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g--~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKE--LGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CCeEEEEeCCc
Confidence 58999999999999999999988 5 799999653
No 456
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.65 E-value=0.29 Score=44.76 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|+|+|+|-+|.++|..|++.| .+|++++|..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G--~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQ--QNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTT--CEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCH
Confidence 5678999999999999999999999 9999998653
No 457
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=89.65 E-value=0.18 Score=50.09 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=23.2
Q ss_pred cccCCeeeeeccccCCccchhhhhhhHHHHHhhccc
Q 014990 378 QVENGLYVCGWLKRGPTGIIATNLYCAEETVSSLSL 413 (415)
Q Consensus 378 t~~p~vfaiGD~~~~~~~~~~~a~~~g~~~a~~i~~ 413 (415)
|..||+|.+||.+....++. .|+..|+.+|..|++
T Consensus 455 t~i~gLyl~G~~t~pG~Gv~-ga~~SG~~aA~~il~ 489 (501)
T 4dgk_A 455 KTITNLYLVGAGTHPGAGIP-GVIGSAKATAGLMLE 489 (501)
T ss_dssp -CCTTEEECCCH------HH-HHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCcccHH-HHHHHHHHHHHHHHH
Confidence 56899999999764334555 578889999988765
No 458
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.60 E-value=0.38 Score=44.80 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+.++|+|||+|..|.+.|..|+..+...+++|+|...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4578999999999999999999998222999999754
No 459
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.52 E-value=0.38 Score=47.41 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
..++.|||.|+-|+..|..|++.| ++|+++|+.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHH
Confidence 468999999999999999999999 99999999865
No 460
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.47 E-value=0.46 Score=44.17 Aligned_cols=35 Identities=34% Similarity=0.452 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||.|.-|...|..|++.| ++|+++|+.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G--~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQG--KRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 4678999999999999999999999 9999999874
No 461
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.40 E-value=0.28 Score=45.43 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=32.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
.++|.|||.|.-|...|..|++.| ++|+++|+.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP--GGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST--TCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCHH
Confidence 568999999999999999999999 99999998764
No 462
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.39 E-value=0.39 Score=44.96 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=27.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEE
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDII 50 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~li 50 (415)
..++|+|||+|.-|.+.|..|++.| .+|+++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G--~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG--HEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT--CEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC--CeEEEE
Confidence 5789999999999999999999998 899988
No 463
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.38 E-value=0.43 Score=47.26 Aligned_cols=35 Identities=23% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||+|.-|...|..|++.| ++|+++|+.+
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC--CeEEEEECCH
Confidence 4568999999999999999999999 9999999764
No 464
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.38 E-value=0.43 Score=44.26 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=32.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.-..++|.|||+|..|..+|..|...| .+|+++|+.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALG--ANVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCC--CEEEEEECC
Confidence 346789999999999999999999999 899999864
No 465
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.37 E-value=0.39 Score=44.57 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=29.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|+|||+|..|.++|..|+..+...+++|+|..+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 57999999999999999999988212899999643
No 466
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.37 E-value=0.44 Score=44.04 Aligned_cols=35 Identities=29% Similarity=0.289 Sum_probs=31.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
-..++|.|||.|..|..+|..|...| .+|+++|+.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~dr~ 187 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALG--AKVKVGARE 187 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEECC
Confidence 46789999999999999999999999 899999864
No 467
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.29 E-value=0.46 Score=44.21 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.|||+|.-|...|..|.+.+ ++|+++|+.+
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g--~~V~~~~~~~ 63 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMG--HTVTVWNRTA 63 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSG
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCC--CEEEEEeCCH
Confidence 3578999999999999999999998 8999998654
No 468
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.28 E-value=0.48 Score=44.95 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=30.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|||+ |..|.++|..+...+...+++|+|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 5678999998 99999999999998833489999853
No 469
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.24 E-value=0.39 Score=44.86 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
..++|.|||.|.-|...|..|++.| + +|+++|+..
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G--~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAG--AIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHS--CCEEEEECSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCC--CCeEEEEcCCC
Confidence 4679999999999999999999999 8 999999863
No 470
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.15 E-value=0.52 Score=44.16 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
.+++|+|||+|..|.++|..|+..+...+++|+|..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 457999999999999999999988733489999853
No 471
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.14 E-value=0.47 Score=44.77 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=31.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 16 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..+.++|+|||+|..|.+.|..|+..+...+++|+|..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 45678999999999999999999998822389999953
No 472
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.08 E-value=0.55 Score=44.23 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|.|||+|..|.++|..|+..+--.+++|+|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 568999999999999999999998821289999963
No 473
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.05 E-value=0.3 Score=44.90 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|.|||.|.-|...|..|++.| ++|+++|+.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG--FDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT--CCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCC--CeEEEEcCCH
Confidence 57999999999999999999999 9999999765
No 474
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.01 E-value=0.53 Score=43.60 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 18 NPLRVCVVG-SGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIG-gG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
..++|.||| +|.-|.+.|..|.+.| ++|+++++.+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G--~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG--YPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT--CCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC--CeEEEEECCc
Confidence 346899999 9999999999999999 8999999765
No 475
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.97 E-value=0.47 Score=43.26 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
++|.|||+|.-|.+.|..|.+.+ ++|+++|+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG--HYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC--CEEEEEECC
Confidence 47999999999999999999998 899999865
No 476
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.95 E-value=0.57 Score=43.86 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|||+|..|.+.|..|+..+...+++++|..
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 457999999999999999999888733489999854
No 477
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.95 E-value=0.39 Score=47.63 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
.++|.|||.|..|...|..|++.+++++|+++|+.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 468999999999999999999993339999999874
No 478
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.87 E-value=0.54 Score=44.29 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=29.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR 52 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~ 52 (415)
.++++|+|||+|..|.++|..|...+-..+++|+|.
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 356899999999999999999988872237888884
No 479
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.86 E-value=0.52 Score=43.43 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=31.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~ 53 (415)
...++++|+|+|-+|-+++..|++.| . +|+|++|.
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G--~~~v~i~~R~ 160 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHG--VQKLQVADLD 160 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEECC
Confidence 36789999999999999999999998 7 69999865
No 480
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.68 E-value=0.44 Score=41.65 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=31.5
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 19 PLRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 19 ~~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
.++|+|+|| |+.|...+..|.+.| ++|+++++.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT--CEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEEcCcc
Confidence 478999996 999999999999999 99999998743
No 481
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.65 E-value=0.63 Score=44.49 Aligned_cols=34 Identities=24% Similarity=0.172 Sum_probs=31.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR 52 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~ 52 (415)
-..++|+|+|.|..|..+|..|.+.| .+|++.|+
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~G--akVvv~D~ 204 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEG--AKLVVTDV 204 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECS
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCC--CEEEEEcC
Confidence 46789999999999999999999999 99998884
No 482
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.58 E-value=0.53 Score=44.08 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=31.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~ 53 (415)
...++++|+|+|-+|-++|..|++.| . +|+|++|.
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~G--a~~V~i~nR~ 187 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDG--VKEISIFNRK 187 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTT--CSEEEEEECS
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCC--CCEEEEEECC
Confidence 36789999999999999999999998 7 89999876
No 483
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.56 E-value=0.61 Score=43.61 Aligned_cols=34 Identities=24% Similarity=0.134 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCc--eEEEEcCCC
Q 014990 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRLP 54 (415)
Q Consensus 19 ~~~VvIIGgG~AGl~aA~~L~~~g~~~--~v~lie~~~ 54 (415)
.++|.|||.|.-|.+.|..|.+.| + +|+++|+.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G--~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CCCEEEEEECCH
Confidence 478999999999999999999999 6 899998764
No 484
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.43 E-value=0.51 Score=44.19 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
++|+|||+|..|.++|..|+..+-..+++|+|..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 57999999999999999999988212899999654
No 485
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.36 E-value=0.56 Score=42.79 Aligned_cols=32 Identities=22% Similarity=0.089 Sum_probs=28.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCc--eEEEEcCC
Q 014990 20 LRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRL 53 (415)
Q Consensus 20 ~~VvIIGgG~AGl~aA~~L~~~g~~~--~v~lie~~ 53 (415)
++|.|||+|.-|.+.|..|.+.| + +|+++|+.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g--~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcC--CCcEEEEEeCC
Confidence 57999999999999999999998 6 89988854
No 486
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.32 E-value=0.66 Score=43.28 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=32.8
Q ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 16 SSNPLRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 16 ~~~~~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
....++|+|.|| |+.|.+++..|++.| ++|+++++..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g--~~V~~~~r~~ 54 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQG--HEILVIDNFA 54 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGT--CEEEEEECCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 345789999998 999999999999999 9999999854
No 487
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.31 E-value=0.44 Score=43.61 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|||+|-+|-+.|..|.+.+ .+|+++++.
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g--~~V~v~~r~ 161 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEG--AKVFLWNRT 161 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcC--CEEEEEECC
Confidence 4678999999999999999999998 799999865
No 488
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.30 E-value=0.23 Score=44.16 Aligned_cols=33 Identities=6% Similarity=0.046 Sum_probs=28.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|+|+|+|..|...|..|.+.+ + |+++|+.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g--~-v~vid~~ 40 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSE--V-FVLAEDE 40 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSE--E-EEEESCG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCC--e-EEEEECC
Confidence 4678999999999999999999988 8 9999854
No 489
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=88.18 E-value=0.62 Score=42.61 Aligned_cols=35 Identities=26% Similarity=0.166 Sum_probs=31.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~ 53 (415)
...++++|+|+|-+|-+++..|++.| . +|++++|.
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G--~~~v~i~~R~ 153 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAG--PSELVIANRD 153 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTC--CSEEEEECSC
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcC--CCEEEEEeCC
Confidence 36789999999999999999999998 6 89999864
No 490
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.13 E-value=0.6 Score=42.83 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
..++|.|||+|.-|.+.|..|.+.+++.+|+++|+.
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 357899999999999999999998534789988854
No 491
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.12 E-value=0.58 Score=43.12 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=32.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 18 NPLRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGg-G~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
.+++|+|+|| |+.|.+++..|.+.| ++|+++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG--EEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC--CEEEEEecCCc
Confidence 4678999999 999999999999999 99999998754
No 492
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.07 E-value=0.73 Score=44.30 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~~ 55 (415)
...++|+|||+|..|..++..+.+.| ++|+++|..+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G--~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMG--YKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCCC
Confidence 46779999999999999999999999 99999997653
No 493
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.91 E-value=0.57 Score=42.99 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc---eEEEEcCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA---QVDIIDRLP 54 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~---~v~lie~~~ 54 (415)
..++|.|||+|.-|.+.|..|.+.+ + +|+++|+++
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g--~~~~~V~v~dr~~ 39 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANG--YDPNRICVTNRSL 39 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTT--CCGGGEEEECSSS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC--CCCCeEEEEeCCH
Confidence 3578999999999999999999998 6 899998654
No 494
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=87.90 E-value=0.61 Score=46.25 Aligned_cols=35 Identities=23% Similarity=0.085 Sum_probs=31.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
-..++|+|+|+|..|.++|..|+..| .+|+++|+.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~G--A~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAG--ARVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 36789999999999999999999999 899999864
No 495
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.86 E-value=0.2 Score=44.77 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=31.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
+..++|.|||.|.-|.+.|..|++.| ++|+.+++.
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G--~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVG--HYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTT--CEEEECSSG
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCC--CEEEEecCH
Confidence 35679999999999999999999999 999999873
No 496
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=87.84 E-value=2.2 Score=41.67 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCceEEEEcCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~ 53 (415)
...+|+|||+|-.|-.+|..|++.| -.+++|+|..
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aG-vg~i~ivD~D 73 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSG-FRQIHVIDMD 73 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTT-CCCEEEEECC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcC-CCEEEEEcCC
Confidence 4678999999999999999999999 3489999876
No 497
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=87.80 E-value=0.38 Score=44.17 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCCC
Q 014990 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPT 55 (415)
Q Consensus 18 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~~ 55 (415)
..++++|+|+|-+|-++|..|.+.| . +|++++|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G--~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIV--RPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTC--CSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEeCCHH
Confidence 5678999999999999999999998 7 8999998753
No 498
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.78 E-value=0.41 Score=45.67 Aligned_cols=32 Identities=25% Similarity=0.160 Sum_probs=29.9
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCceEEEEcCCC
Q 014990 21 RVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (415)
Q Consensus 21 ~VvIIGgG~AGl~aA~~L~~~g~~~~v~lie~~~ 54 (415)
+|.|||+|.-|.+.|..|.+.| ++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G--~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKC--REVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTE--EEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCC--CEEEEEECCH
Confidence 8999999999999999999998 9999999763
No 499
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.75 E-value=0.61 Score=42.93 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=31.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~~ 54 (415)
...++++|+|+|-+|-+++..|.+.| . +|+|++|..
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G--~~~v~v~nRt~ 156 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNF--AKDIYVVTRNP 156 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTT--CSEEEEEESCH
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 36789999999999999999999998 7 899998653
No 500
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=87.74 E-value=0.66 Score=43.38 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=31.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCc-eEEEEcCC
Q 014990 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (415)
Q Consensus 17 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~-~v~lie~~ 53 (415)
...++++|+|+|-+|-+++..|++.| . +|+|++|.
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G--~~~v~v~nRt 181 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEG--IKEIKLFNRK 181 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEECS
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcC--CCEEEEEECC
Confidence 36789999999999999999999998 7 89999876
Done!