Query 014994
Match_columns 415
No_of_seqs 476 out of 4800
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 04:47:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014994.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014994hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xai_A ASB-9, ankyrin repeat a 100.0 3.6E-39 1.2E-43 295.1 19.6 217 100-328 3-224 (261)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 8.9E-39 3E-43 291.1 19.2 223 97-325 7-247 (253)
3 1n11_A Ankyrin; clathrin, BAND 100.0 4E-38 1.4E-42 309.5 24.4 222 99-328 145-371 (437)
4 1wdy_A 2-5A-dependent ribonucl 100.0 7.8E-38 2.7E-42 288.6 24.6 225 100-329 39-281 (285)
5 1k1a_A B-cell lymphoma 3-encod 100.0 6.7E-39 2.3E-43 289.1 16.5 223 98-325 7-240 (241)
6 2fo1_E LIN-12 protein; beta-ba 100.0 4.9E-39 1.7E-43 309.6 16.4 225 98-326 123-371 (373)
7 3b7b_A Euchromatic histone-lys 100.0 6E-38 2.1E-42 282.3 21.3 218 97-321 8-230 (237)
8 3ljn_A Hypothetical protein; a 100.0 1.9E-38 6.5E-43 304.3 19.1 224 97-327 17-270 (364)
9 1n11_A Ankyrin; clathrin, BAND 100.0 2.4E-37 8.4E-42 303.9 25.4 290 8-328 13-338 (437)
10 1oy3_D Transcription factor in 100.0 5.8E-38 2E-42 289.5 19.6 209 99-312 8-269 (282)
11 4g8k_A 2-5A-dependent ribonucl 100.0 2.8E-37 9.7E-42 293.1 24.2 229 99-329 24-301 (337)
12 3d9h_A CDNA FLJ77766, highly s 100.0 8.6E-38 2.9E-42 289.7 20.0 217 98-326 57-279 (285)
13 3aji_A 26S proteasome non-ATPa 100.0 1.7E-37 5.7E-42 278.3 19.8 219 101-326 7-230 (231)
14 1wdy_A 2-5A-dependent ribonucl 100.0 8.2E-37 2.8E-41 281.8 24.9 224 99-328 4-247 (285)
15 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-36 4.3E-41 289.2 24.4 225 97-329 21-308 (351)
16 4b93_B Ankyrin repeat domain-c 100.0 4.7E-38 1.6E-42 288.8 12.8 214 99-320 10-235 (269)
17 2dzn_A Probable 26S proteasome 100.0 1E-36 3.4E-41 272.6 20.6 217 100-322 2-226 (228)
18 3d9h_A CDNA FLJ77766, highly s 100.0 1.3E-36 4.4E-41 281.8 20.8 224 98-330 13-251 (285)
19 3utm_A Tankyrase-1; tankyrase, 100.0 5.6E-36 1.9E-40 284.7 23.0 220 98-326 56-334 (351)
20 2f8y_A Notch homolog 1, transl 100.0 1.5E-36 5.1E-41 270.6 17.7 211 111-327 2-217 (223)
21 3eu9_A Huntingtin-interacting 100.0 7.4E-36 2.5E-40 268.5 21.0 222 98-327 7-236 (240)
22 1oy3_D Transcription factor in 100.0 1.5E-35 5E-40 273.4 19.7 196 132-331 6-255 (282)
23 1s70_B 130 kDa myosin-binding 100.0 4.1E-36 1.4E-40 279.9 15.9 205 99-311 39-275 (299)
24 4g8k_A 2-5A-dependent ribonucl 100.0 8.6E-35 3E-39 275.9 23.4 219 100-328 59-328 (337)
25 2rfa_A Transient receptor pote 100.0 4E-35 1.4E-39 263.1 19.8 193 100-327 3-223 (232)
26 3kea_A K1L; tropism, ANK repea 100.0 3.9E-36 1.3E-40 278.6 13.5 212 99-327 30-247 (285)
27 2xai_A ASB-9, ankyrin repeat a 100.0 1E-34 3.4E-39 265.6 19.9 191 134-331 2-196 (261)
28 2etb_A Transient receptor pote 100.0 2.8E-35 9.6E-40 268.2 14.5 201 99-327 1-247 (256)
29 1yyh_A HN1;, notch 1, ankyrin 100.0 2.9E-35 9.8E-40 267.9 14.3 196 125-328 2-217 (253)
30 3hra_A Ankyrin repeat family p 100.0 3.3E-34 1.1E-38 251.2 20.5 187 99-324 4-201 (201)
31 3b7b_A Euchromatic histone-lys 100.0 4.4E-34 1.5E-38 257.0 20.9 197 125-329 3-205 (237)
32 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-33 3.7E-38 254.9 20.9 195 132-330 6-212 (241)
33 2fo1_E LIN-12 protein; beta-ba 100.0 4.7E-35 1.6E-39 281.7 12.5 221 97-328 91-340 (373)
34 4b93_B Ankyrin repeat domain-c 100.0 2.5E-34 8.7E-39 263.9 15.8 196 132-331 8-215 (269)
35 2dzn_A Probable 26S proteasome 100.0 1.5E-33 5E-38 251.9 19.0 195 135-331 2-205 (228)
36 4gpm_A Engineered protein OR26 100.0 2.4E-33 8.3E-38 238.7 19.4 155 102-296 6-164 (169)
37 4gpm_A Engineered protein OR26 100.0 3.1E-33 1.1E-37 238.1 19.1 153 137-327 6-162 (169)
38 1ikn_D Protein (I-kappa-B-alph 100.0 1.4E-34 4.7E-39 260.4 10.7 193 132-328 5-211 (236)
39 3kea_A K1L; tropism, ANK repea 100.0 5.4E-34 1.8E-38 264.2 14.7 217 110-339 10-239 (285)
40 1s70_B 130 kDa myosin-binding 100.0 1.7E-33 5.9E-38 262.1 16.9 221 106-331 4-262 (299)
41 2pnn_A Transient receptor pote 100.0 5E-34 1.7E-38 262.6 11.4 206 96-327 9-260 (273)
42 3jxi_A Vanilloid receptor-rela 100.0 1.9E-33 6.5E-38 256.6 14.2 203 99-327 4-251 (260)
43 3ljn_A Hypothetical protein; a 100.0 2.3E-33 7.7E-38 269.0 14.4 195 124-328 11-238 (364)
44 3aji_A 26S proteasome non-ATPa 100.0 2.4E-32 8.1E-37 244.7 19.4 192 132-328 3-199 (231)
45 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-34 8.2E-39 258.8 6.1 207 99-310 7-228 (236)
46 2f8y_A Notch homolog 1, transl 100.0 7.2E-32 2.5E-36 240.2 20.9 191 98-295 23-218 (223)
47 1sw6_A Regulatory protein SWI6 100.0 1.6E-33 5.5E-38 266.1 10.2 196 102-312 99-327 (327)
48 4hbd_A KN motif and ankyrin re 100.0 3E-32 1E-36 251.2 12.8 183 102-324 78-273 (276)
49 2pnn_A Transient receptor pote 100.0 1.4E-31 4.9E-36 246.1 13.6 186 97-306 51-272 (273)
50 2rfm_A Putative ankyrin repeat 100.0 9.5E-31 3.3E-35 227.7 15.4 156 132-325 32-191 (192)
51 3eu9_A Huntingtin-interacting 100.0 2.5E-30 8.5E-35 232.3 17.7 192 132-328 6-204 (240)
52 3v31_A Ankyrin repeat family A 100.0 4.9E-30 1.7E-34 217.9 17.0 155 134-326 2-160 (167)
53 2y1l_E Darpin-8.4; hydrolase-i 100.0 1E-29 3.4E-34 216.6 18.8 155 132-324 11-169 (169)
54 3v30_A DNA-binding protein rfx 100.0 3.5E-30 1.2E-34 220.0 14.8 158 135-329 2-163 (172)
55 1ihb_A P18-INK4C(INK6), cyclin 100.0 6.2E-30 2.1E-34 216.0 15.5 155 133-326 3-162 (162)
56 3v30_A DNA-binding protein rfx 100.0 6.1E-30 2.1E-34 218.4 14.6 163 102-304 4-171 (172)
57 3twr_A Tankyrase-2; ankyrin re 100.0 6.8E-30 2.3E-34 216.6 13.3 156 132-325 5-164 (165)
58 1awc_B Protein (GA binding pro 100.0 3.9E-29 1.3E-33 209.3 17.7 147 135-320 2-152 (153)
59 2rfa_A Transient receptor pote 100.0 3.6E-29 1.2E-33 224.2 17.9 157 134-327 2-184 (232)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.1E-29 1E-33 211.7 15.9 154 99-293 4-162 (162)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-28 3.9E-33 210.0 19.1 154 98-291 12-169 (169)
62 3f6q_A Integrin-linked protein 100.0 1.4E-29 5E-34 217.7 13.6 159 133-328 3-165 (179)
63 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.5E-28 5.1E-33 206.2 17.1 150 135-323 2-155 (156)
64 1sw6_A Regulatory protein SWI6 100.0 2.3E-30 7.7E-35 244.6 5.9 179 140-331 102-313 (327)
65 3hra_A Ankyrin repeat family p 100.0 1.5E-28 5.3E-33 215.0 17.0 161 132-328 2-172 (201)
66 2etb_A Transient receptor pote 100.0 2.7E-29 9.4E-34 228.5 11.5 160 134-327 1-207 (256)
67 3v31_A Ankyrin repeat family A 100.0 1.4E-28 4.8E-33 208.9 14.2 156 100-295 3-162 (167)
68 2rfm_A Putative ankyrin repeat 100.0 1.6E-28 5.6E-33 213.5 14.6 153 99-291 34-190 (192)
69 3f6q_A Integrin-linked protein 100.0 2.5E-28 8.5E-33 209.9 14.3 162 100-301 5-171 (179)
70 1awc_B Protein (GA binding pro 100.0 1.2E-27 4.2E-32 200.1 17.8 147 100-287 2-152 (153)
71 2vge_A RELA-associated inhibit 100.0 1.1E-30 3.7E-35 233.9 -3.2 181 98-321 19-208 (229)
72 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.8E-29 9.7E-34 226.3 6.1 182 100-324 5-202 (239)
73 1d9s_A Cyclin-dependent kinase 99.9 6.4E-28 2.2E-32 197.8 11.8 128 197-326 4-136 (136)
74 3twr_A Tankyrase-2; ankyrin re 99.9 2.4E-27 8.3E-32 200.8 14.2 154 98-292 6-164 (165)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.7E-28 1.6E-32 218.3 10.2 158 132-328 2-166 (239)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-26 5.5E-31 193.8 17.1 149 100-290 2-155 (156)
77 3jxi_A Vanilloid receptor-rela 99.9 2.6E-27 8.9E-32 215.9 13.0 162 132-327 2-211 (260)
78 4hbd_A KN motif and ankyrin re 99.9 7.1E-27 2.4E-31 215.2 14.7 155 98-291 109-273 (276)
79 2jab_A H10-2-G3; HER2, darpin, 99.9 1.9E-26 6.6E-31 188.9 14.1 123 201-324 10-136 (136)
80 3t8k_A Uncharacterized protein 99.9 4.3E-27 1.5E-31 203.4 8.0 151 135-325 6-178 (186)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-26 4.1E-31 194.8 9.6 136 132-306 9-149 (156)
82 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.5E-26 2.9E-30 181.8 14.0 122 204-326 1-126 (126)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 1.7E-26 6E-31 193.8 9.9 128 200-329 7-139 (156)
84 1d9s_A Cyclin-dependent kinase 99.9 4.7E-26 1.6E-30 186.6 10.8 130 123-293 2-136 (136)
85 2aja_A Ankyrin repeat family p 99.9 1.2E-27 4.1E-32 228.9 0.4 209 100-324 92-342 (376)
86 2vge_A RELA-associated inhibit 99.9 4.4E-26 1.5E-30 203.9 9.4 140 188-328 4-150 (229)
87 3c5r_A BARD-1, BRCA1-associate 99.9 2.5E-26 8.6E-31 188.4 6.5 125 201-326 6-134 (137)
88 3t8k_A Uncharacterized protein 99.9 4.5E-26 1.5E-30 197.0 6.4 163 102-298 8-184 (186)
89 3aaa_C Myotrophin, protein V-1 99.9 5.1E-25 1.7E-29 177.1 9.9 108 202-310 4-115 (123)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.6E-24 2.6E-28 170.3 14.9 122 134-293 1-126 (126)
91 1dcq_A PYK2-associated protein 99.9 1.4E-23 4.6E-28 193.2 18.0 191 131-328 62-265 (278)
92 2aja_A Ankyrin repeat family p 99.9 2.3E-26 7.9E-31 220.0 -0.8 176 101-327 66-251 (376)
93 3ehr_A Osteoclast-stimulating 99.9 9.7E-25 3.3E-29 194.1 8.1 128 201-328 69-200 (222)
94 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-23 4.1E-28 172.2 14.0 122 132-291 11-136 (136)
95 3deo_A Signal recognition part 99.9 3.7E-24 1.3E-28 184.6 8.1 121 202-324 41-166 (183)
96 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.2E-23 1.8E-27 156.7 11.1 93 233-326 1-93 (93)
97 3ui2_A Signal recognition part 99.9 1.9E-23 6.4E-28 188.7 10.2 107 203-311 43-154 (244)
98 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-23 4.2E-28 172.2 6.8 130 123-293 1-134 (137)
99 2b0o_E UPLC1; arfgap, structur 99.9 9.3E-23 3.2E-27 189.8 13.3 107 201-314 186-299 (301)
100 3deo_A Signal recognition part 99.9 6.1E-23 2.1E-27 176.9 10.3 136 132-323 41-181 (183)
101 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-21 3.7E-26 182.6 19.4 122 204-326 150-284 (301)
102 3lvq_E ARF-GAP with SH3 domain 99.9 2.6E-22 8.7E-27 200.0 14.5 124 205-329 132-268 (497)
103 3ehr_A Osteoclast-stimulating 99.9 5.9E-23 2E-27 182.6 7.8 133 132-302 70-207 (222)
104 3jue_A Arfgap with coiled-coil 99.9 3.9E-22 1.3E-26 190.0 13.3 123 203-326 197-326 (368)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.2E-21 4.2E-26 149.0 11.2 89 204-293 1-93 (93)
106 2l6b_A NR1C; ankyrin, consensu 99.9 2.7E-22 9.2E-27 159.0 6.6 104 201-305 5-112 (115)
107 3ui2_A Signal recognition part 99.9 9.6E-22 3.3E-26 177.5 10.8 139 132-326 42-185 (244)
108 3aaa_C Myotrophin, protein V-1 99.8 4.4E-21 1.5E-25 153.9 10.4 98 230-328 3-100 (123)
109 3lvq_E ARF-GAP with SH3 domain 99.8 1.1E-20 3.8E-25 188.2 14.2 139 134-310 131-276 (497)
110 3jue_A Arfgap with coiled-coil 99.8 9.8E-21 3.4E-25 180.3 12.7 145 132-312 196-348 (368)
111 2l6b_A NR1C; ankyrin, consensu 99.8 7.2E-21 2.5E-25 150.7 7.6 98 230-328 5-102 (115)
112 1dcq_A PYK2-associated protein 99.8 8.2E-20 2.8E-24 167.9 15.1 128 135-294 130-264 (278)
113 2zgd_A 3 repeat synthetic anky 99.8 5E-20 1.7E-24 144.7 10.2 91 229-320 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 7.1E-18 2.4E-22 132.3 10.4 89 198-287 17-109 (110)
115 1r29_A B-cell lymphoma 6 prote 99.2 9E-11 3.1E-15 94.0 8.3 90 2-122 32-122 (127)
116 3b84_A Zinc finger and BTB dom 99.1 9.9E-11 3.4E-15 92.6 8.0 88 2-123 27-114 (119)
117 2vkp_A BTB/POZ domain-containi 99.1 1.1E-10 3.8E-15 90.8 7.7 90 2-122 11-104 (109)
118 3htm_A Speckle-type POZ protei 99.1 1.7E-10 5.9E-15 97.6 9.3 123 2-157 37-159 (172)
119 2ppi_A Gigaxonin; BTB domain, 99.1 1.2E-10 4E-15 95.4 7.7 93 2-122 50-142 (144)
120 2if5_A Zinc finger and BTB dom 99.1 1.2E-10 4.3E-15 92.2 7.5 90 2-121 28-117 (120)
121 2vpk_A Myoneurin; transcriptio 99.1 1.9E-10 6.4E-15 90.6 8.1 89 2-122 25-113 (116)
122 3hve_A Gigaxonin; ubiquitin, c 99.1 2.6E-10 9.1E-15 103.0 9.0 125 2-157 34-158 (256)
123 2q81_A MIZ-1 protein; BTB/POZ 99.1 2.9E-10 1E-14 89.9 8.0 86 2-122 30-115 (119)
124 2yy9_A Zinc finger and BTB dom 99.1 1.9E-10 6.5E-15 93.1 6.8 89 2-124 28-116 (135)
125 1buo_A POZ domain, protein (pr 99.1 2.1E-10 7.1E-15 91.0 6.8 86 2-122 31-116 (121)
126 2z8h_A Transcription regulator 99.0 2.5E-10 8.6E-15 92.8 6.6 92 2-124 39-130 (138)
127 4eoz_A Speckle-type POZ protei 99.0 2.2E-10 7.6E-15 94.0 5.1 115 2-149 28-142 (145)
128 3hqi_A Speckle-type POZ protei 99.0 1.1E-09 3.9E-14 101.8 10.1 123 2-157 177-299 (312)
129 3i3n_A Kelch-like protein 11; 98.9 5.4E-10 1.9E-14 102.2 5.5 129 2-157 35-166 (279)
130 2ihc_A Transcription regulator 98.9 1.3E-10 4.6E-15 92.6 1.0 87 2-119 32-118 (124)
131 3fkc_A Transcriptional regulat 98.9 1.2E-09 4.3E-14 85.7 6.0 81 2-116 34-114 (116)
132 3ohu_A Transcription regulator 98.9 2.8E-10 9.7E-15 90.8 1.9 84 2-116 35-118 (125)
133 3ga1_A Nucleus accumbens-assoc 98.9 3.8E-10 1.3E-14 90.6 2.4 86 2-120 36-121 (129)
134 3m5b_A Zinc finger and BTB dom 98.8 2.1E-09 7.1E-14 84.7 4.0 83 2-123 33-115 (119)
135 2ast_A S-phase kinase-associat 97.2 0.00074 2.5E-08 55.5 6.9 111 2-123 3-122 (159)
136 4ajy_C Transcription elongatio 96.6 0.0011 3.7E-08 49.5 2.7 57 3-69 5-63 (97)
137 2p1m_A SKP1-like protein 1A; F 94.9 0.0051 1.7E-07 50.5 0.3 110 2-125 6-123 (160)
138 1fs1_B SKP1, cyclin A/CDK2-ass 94.1 0.091 3.1E-06 41.9 5.9 108 2-124 4-118 (141)
139 3drz_A BTB/POZ domain-containi 89.4 0.68 2.3E-05 34.7 5.7 94 2-122 8-103 (107)
140 1hv2_A Elongin C, ELC1; protei 85.4 0.71 2.4E-05 34.1 3.5 59 2-72 6-65 (99)
141 2fnj_C Transcription elongatio 83.6 0.73 2.5E-05 33.8 2.9 62 2-72 3-65 (96)
142 3v7d_A Suppressor of kinetocho 64.8 21 0.00072 28.9 7.3 111 6-123 14-129 (169)
143 3drx_A BTB/POZ domain-containi 59.8 9.9 0.00034 31.8 4.4 94 2-122 14-109 (202)
144 1vcb_B Protein (elongin C); tu 45.3 12 0.00041 28.0 2.5 62 2-72 19-81 (112)
145 1gp8_A Protein (scaffolding pr 33.5 33 0.0011 20.0 2.4 18 208-225 16-33 (40)
146 3zrh_A Ubiquitin thioesterase 21.8 1.7E+02 0.0058 27.3 6.2 53 106-158 28-92 (454)
No 1
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=295.10 Aligned_cols=217 Identities=15% Similarity=0.083 Sum_probs=196.2
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSE 179 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~ 179 (415)
+.||||+|+..|+.+++++|++.|++++.. +.+|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPLFNACV 78 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHH
Confidence 458899999999999999999999999986 89999999999999999999999998 78999999999999999999
Q ss_pred HHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHH
Q 014994 180 IKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVL 254 (415)
Q Consensus 180 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll 254 (415)
.+...+ ..+++.|+++.. +..|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLL 154 (261)
T ss_dssp HTCHHHHHHHHHTTCCSSC----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCC----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 888877 444577766543 346999999999999999999999999 54 568999999999999999999999
Q ss_pred hcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 255 NMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 255 ~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
+. |+++|. +..|+||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|+. +..+++.|++.+..+.
T Consensus 155 ~~-g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~--~~~~~~~ll~~~~~~~ 224 (261)
T 2xai_A 155 ES-GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLEREGPPS 224 (261)
T ss_dssp HH-TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TCTHHHHHHHC-CCCC
T ss_pred Hc-CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccc--cccHHHHHHhccCCcc
Confidence 97 899995 8899999999999999999999999999999999999999999995 5569999999887654
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.9e-39 Score=291.10 Aligned_cols=223 Identities=13% Similarity=-0.002 Sum_probs=171.5
Q ss_pred hhhhHHHHHHHHHcC-------------cHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCC
Q 014994 97 VNYVIELMYASAALQ-------------MKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNL 163 (415)
Q Consensus 97 ~~~~~~~L~~A~~~g-------------~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~ 163 (415)
...+.||||+|+..| ..+++++|++.|++++.. .+..|.||||+|+..|+.+++++|++. +.++
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~ 83 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEA--SADA 83 (253)
T ss_dssp ---------------------------------------------C-CCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCT
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCC
Confidence 345789999999987 899999999999999763 378999999999999999999999998 7889
Q ss_pred CccccCCCChHHHHHHHHhhhhhh-ccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHH
Q 014994 164 DNFCLERELPDEVSSEIKSLRVKS-NQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYAL 238 (415)
Q Consensus 164 ~~~~~~g~tpl~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL 238 (415)
+..+..|.||||+|+..+...+.. ++..++ ..++..+..|.||||+|+..|+.+++++|++.| ++ |..|+|||
T Consensus 84 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 161 (253)
T 1yyh_A 84 NIQDNMGRTPLHAAVSADAQGVFQILIRNRA--TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT--SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 999999999999999888777633 334443 245666789999999999999999999999999 54 57899999
Q ss_pred HHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHH
Q 014994 239 HYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYI 318 (415)
Q Consensus 239 ~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~ 318 (415)
|+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++
T Consensus 162 ~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~ 240 (253)
T 1yyh_A 162 HWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVR 240 (253)
T ss_dssp HHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999996 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC
Q 014994 319 EASKQGQ 325 (415)
Q Consensus 319 ~l~~~g~ 325 (415)
+|.....
T Consensus 241 ~l~~~~~ 247 (253)
T 1yyh_A 241 LLDLEHH 247 (253)
T ss_dssp HHHC---
T ss_pred HHHHHhh
Confidence 9987654
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-38 Score=309.50 Aligned_cols=222 Identities=17% Similarity=0.110 Sum_probs=195.3
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
.+.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+
T Consensus 145 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~ 220 (437)
T 1n11_A 145 KGFTPLHVAAKYGKVRVAELLLERDAHPNAA--GKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSPAWNGYTPLHIAA 220 (437)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCCCTTCCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCcCCCCCCHHHHHH
Confidence 3567899999999999999999999988886 78899999999999999999999987 6678888888999999998
Q ss_pred HHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHH
Q 014994 179 EIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEV 253 (415)
Q Consensus 179 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~L 253 (415)
..+...+ ..++..|++ ++..+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|
T Consensus 221 ~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 297 (437)
T 1n11_A 221 KQNQVEVARSLLQYGGS---ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 297 (437)
T ss_dssp HTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 8777766 344465654 4455678999999999999999999999998 43 56789999999999999999999
Q ss_pred HhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 254 LNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 254 l~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
++. |+++|.+|..|+||||+|+..|+.++|++|+++|+|+|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 298 l~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 298 IKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN 371 (437)
T ss_dssp HHH-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HhC-CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCC
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999998885
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.8e-38 Score=288.63 Aligned_cols=225 Identities=19% Similarity=0.155 Sum_probs=204.6
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSE 179 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~ 179 (415)
+.||||+|+..|+.+++++|++.|++++.+ +..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+.
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~ 114 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFLLAAIAGSVKLLKLFLSK--GADVNECDFYGFTAFMEAAV 114 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTCCBHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCcccCCHHHHHHH
Confidence 458899999999999999999999999986 89999999999999999999999998 77899999999999999998
Q ss_pred HHhhhh-hhccccccCccCCCCC-------CccccHHHHHHHhcCCHHHHHHHHHC-C-CC---CCCCchHHHHHHHCCC
Q 014994 180 IKSLRV-KSNQESEANIAEVDPM-------HAKIVRRIHKALHSDDVELLKLLLDV-S-NV---TLDDAYALHYAAACCS 246 (415)
Q Consensus 180 ~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~-g-~~---~~~g~tpL~~A~~~g~ 246 (415)
.+...+ ..++..|+++...+.. +..|.||||+|+..|+.+++++|++. | ++ |..|.||||+|+..++
T Consensus 115 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 194 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSC
T ss_pred hCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccc
Confidence 888776 4445667666544322 67899999999999999999999997 6 43 5789999999999999
Q ss_pred ----HHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCcchHHHHH
Q 014994 247 ----PKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLS-KGARASETTSDGQTAVAICRRMTRRKDYIEAS 321 (415)
Q Consensus 247 ----~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~-~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~ 321 (415)
.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 195 ~~~~~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll 273 (285)
T 1wdy_A 195 DSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273 (285)
T ss_dssp TTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Confidence 8999999986 89999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred hcCCCccc
Q 014994 322 KQGQETNK 329 (415)
Q Consensus 322 ~~g~~~~~ 329 (415)
++|+++..
T Consensus 274 ~~Ga~~~~ 281 (285)
T 1wdy_A 274 KRGASTDC 281 (285)
T ss_dssp HHSSCSCC
T ss_pred HcCCCCCc
Confidence 99998764
No 5
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.7e-39 Score=289.07 Aligned_cols=223 Identities=15% Similarity=0.073 Sum_probs=196.6
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHH----hCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCCh
Q 014994 98 NYVIELMYASAALQMKDRVFLLQH----WLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELP 173 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tp 173 (415)
..+.||||+|+..|+.+++++|++ .|.+++.. +..|.||||+|+..|+.+++++|++. +.+++..+..|.||
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY--NNLRQTPLHLAVITTLPSVVRLLVTA--GASPMALDRHGQTA 82 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc--cccCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCH
Confidence 346789999999999999999887 78999886 89999999999999999999999998 77899999999999
Q ss_pred HHHHHHHHhhhhh-hccccccC-ccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CCC----CCCchHHHHHHHCCC
Q 014994 174 DEVSSEIKSLRVK-SNQESEAN-IAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NVT----LDDAYALHYAAACCS 246 (415)
Q Consensus 174 l~~a~~~~~~~~~-~~~~~~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~----~~g~tpL~~A~~~g~ 246 (415)
||+|+..+...+. .++..++. ...++..+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence 9999888877663 33444442 2256667789999999999999999999999999 543 579999999999999
Q ss_pred HHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCC
Q 014994 247 PKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQ 325 (415)
Q Consensus 247 ~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~ 325 (415)
.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..|+.++++.|...++
T Consensus 163 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 163 LSMVQLLLQH-GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 9999999996 99999999999999999999999999999999999999999999999999999999999999888765
No 6
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-39 Score=309.57 Aligned_cols=225 Identities=16% Similarity=0.139 Sum_probs=202.3
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHH--------HhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccC
Q 014994 98 NYVIELMYASAALQMKDRVFLLQ--------HWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLE 169 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll--------~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~ 169 (415)
..+.||||+|+..|+.+++++|+ +.|+++|.. |..|.||||+|+..|+.+++++|++. +++++..+..
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~--d~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~ 198 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM--DCDENTPLMLAVLARRRRLVAYLMKA--GADPTIYNKS 198 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC--CCCCCCHHHHHHHcChHHHHHHHHHC--CCCCcccCCC
Confidence 35789999999999998887665 899999997 99999999999999999999999998 7889999999
Q ss_pred CCChHHHHHHHHhhhhhh-ccccccCccCCCCCCccccHHHHHHHhcC---CHHHHHHHHHCC-CCC-----------CC
Q 014994 170 RELPDEVSSEIKSLRVKS-NQESEANIAEVDPMHAKIVRRIHKALHSD---DVELLKLLLDVS-NVT-----------LD 233 (415)
Q Consensus 170 g~tpl~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~g-~~~-----------~~ 233 (415)
|.||||+|+..+...+.. ++..+.....++..|..|.||||+|+..| +.+++++|+++| +++ ..
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~ 278 (373)
T 2fo1_E 199 ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYK 278 (373)
T ss_dssp CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCC
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccccc
Confidence 999999999988877733 44444223456667789999999999998 899999999999 554 37
Q ss_pred CchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 014994 234 DAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTR 313 (415)
Q Consensus 234 g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~ 313 (415)
|+||||+|+..|+.++|++|++..|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+
T Consensus 279 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 279 GRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358 (373)
T ss_dssp CCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC
Confidence 89999999999999999999988669999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHhcCCC
Q 014994 314 RKDYIEASKQGQE 326 (415)
Q Consensus 314 ~~~v~~l~~~g~~ 326 (415)
.+++++|+++|..
T Consensus 359 ~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 359 HNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHHHHTTC--
T ss_pred HHHHHHHHhcCcc
Confidence 9999999999864
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6e-38 Score=282.30 Aligned_cols=218 Identities=19% Similarity=0.152 Sum_probs=195.6
Q ss_pred hhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHH
Q 014994 97 VNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEV 176 (415)
Q Consensus 97 ~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~ 176 (415)
...+.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTC--SEDQRTPLMEAAENNHLEAVKYLIKA--GALVDPKDAEGSTCLHL 83 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTT--TCCCCCCCTTSCCHHHH
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCcc--CCCCCCHHHHHHHhCCHHHHHHHHhC--CCCCCCCCCCCCcHHHH
Confidence 345678999999999999999999999999986 88999999999999999999999998 77899999999999999
Q ss_pred HHHHHhhhhhh-ccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHH
Q 014994 177 SSEIKSLRVKS-NQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFK 251 (415)
Q Consensus 177 a~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~ 251 (415)
|+..+...+.. ++..+ ...++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++
T Consensus 84 A~~~~~~~~~~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNG--QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HHHTTCHHHHHHHHTTT--CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCC--CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence 99888777633 33443 2345566779999999999999999999999999 44 567999999999999999999
Q ss_pred HHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHH
Q 014994 252 EVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEAS 321 (415)
Q Consensus 252 ~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~ 321 (415)
+|++. |++++.+|..|.||||+|+..|+.+++++|+++|+|++.+|.+|.||||+|+..|+...+..+.
T Consensus 162 ~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 162 ILLAA-KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHHc-CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99986 8999999999999999999999999999999999999999999999999999999876555444
No 8
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.9e-38 Score=304.34 Aligned_cols=224 Identities=13% Similarity=0.052 Sum_probs=199.3
Q ss_pred hhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHH
Q 014994 97 VNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEV 176 (415)
Q Consensus 97 ~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~ 176 (415)
...+.|+||+|+..|+.++|++|++.|++++.. |..|.||||+|+..|+.+++++|++. +.+++ +..|.||||+
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~--~~~g~t~L~~ 90 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQ--NRFGCTALHLACKFGCVDTAKYLASV--GEVHS--LWHGQKPIHL 90 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHCCHHHHHHHHHH--CCCCC--CBTTBCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCcHHHHHHHcCCHHHHHHHHHC--CCCcc--ccCCCCHHHH
Confidence 456899999999999999999999999999986 99999999999999999999999999 44433 4689999999
Q ss_pred HHHHHhhhhhhc-ccc----ccCccC--------------CCCCCccccHHHHHHHhcC--CHHHHHHHHHCC-CC---C
Q 014994 177 SSEIKSLRVKSN-QES----EANIAE--------------VDPMHAKIVRRIHKALHSD--DVELLKLLLDVS-NV---T 231 (415)
Q Consensus 177 a~~~~~~~~~~~-~~~----~~~~~~--------------~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~g-~~---~ 231 (415)
|+..++..+... +.. |+++.. ++..+..|.||||+|+..| +.++|++|+++| ++ |
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 988877776333 343 443332 2226678999999999999 999999999999 54 5
Q ss_pred CCCchHHHHHHHCCCHHHHHHHHhcCCCC-----ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 014994 232 LDDAYALHYAAACCSPKVFKEVLNMDSAG-----LNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVA 306 (415)
Q Consensus 232 ~~g~tpL~~A~~~g~~~~v~~Ll~~~gad-----vn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~ 306 (415)
..|+||||+|+..|+.+++++|++. |++ +|..|..|+||||+|+..|+.++|++|+++|+|+|.+|..|+||||
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLY 249 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 6899999999999999999999996 788 9999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcchHHHHHhcCCCc
Q 014994 307 ICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 307 ~A~~~~~~~~v~~l~~~g~~~ 327 (415)
+|+..|+.+++++|++.|..+
T Consensus 250 ~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 250 LSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHHHTCCHHHHHHHHHHSCHH
T ss_pred HHHHhChHHHHHHHHHcCCch
Confidence 999999999999999998764
No 9
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-37 Score=303.87 Aligned_cols=290 Identities=17% Similarity=0.094 Sum_probs=172.1
Q ss_pred ccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcccccCCC
Q 014994 8 ANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVSACVDDA 87 (415)
Q Consensus 8 ~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~~~~~~~ 87 (415)
....|+|.|+..+..+.++.++..+.+......... .|....+.+... .+++|+......+.
T Consensus 13 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~------t~L~~A~~~g~~-~~v~~Ll~~g~~~~----------- 74 (437)
T 1n11_A 13 SGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE------TPLHMAARAGHT-EVAKYLLQNKAKVN----------- 74 (437)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCC------CHHHHHHHHTCH-HHHHHHHHHTCCSS-----------
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCC------CHHHHHHHcCCH-HHHHHHHhCCCCCC-----------
Confidence 456888888888888888888875433211111000 111001111111 22344433211110
Q ss_pred CCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhc--------
Q 014994 88 CVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIA-------- 159 (415)
Q Consensus 88 c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~-------- 159 (415)
.....+.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.++
T Consensus 75 -------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 145 (437)
T 1n11_A 75 -------AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLA--TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKK 145 (437)
T ss_dssp -------CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred -------CCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCC
Confidence 01112345566666666666666666666665553 4455555555555555555555554411
Q ss_pred -----------------------CCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhc
Q 014994 160 -----------------------GSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHS 215 (415)
Q Consensus 160 -----------------------~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 215 (415)
+.+++..+..|.||||+|+..+...+ ..++..|+++ +..+..|.||||+|+..
T Consensus 146 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~ 222 (437)
T 1n11_A 146 GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP---HSPAWNGYTPLHIAAKQ 222 (437)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS---CCCCTTCCCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---CCcCCCCCCHHHHHHHc
Confidence 34445555555555555555444443 2222333332 33445667777777777
Q ss_pred CCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC
Q 014994 216 DDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKG 291 (415)
Q Consensus 216 g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~G 291 (415)
|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|
T Consensus 223 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 301 (437)
T 1n11_A 223 NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG 301 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 7777777777776 33 34677778877777787888777775 7788777778888888888888888888888888
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 292 ARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 292 adin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 302 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n 338 (437)
T 1n11_A 302 VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN 338 (437)
T ss_dssp CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT
T ss_pred ccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCC
Confidence 8888888888888888888888888888888777664
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.8e-38 Score=289.55 Aligned_cols=209 Identities=15% Similarity=0.063 Sum_probs=173.1
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCC---cccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLG---MVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDE 175 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~ 175 (415)
.+.||||+|+..|+.+++++|++.|++ ++.+ +..|.||||+|+..|+.+++++|++. +.+++..+..|.||||
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ--NDLGQTALHLAAILGEASTVEKLYAA--GAGVLVAERGGHTALH 83 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHH
Confidence 467899999999999999999999998 6665 88999999999999999999999998 7889999999999999
Q ss_pred HHHHHHhhhh-hhccccccCc--------------------------------------------cCCCCCCccccHHHH
Q 014994 176 VSSEIKSLRV-KSNQESEANI--------------------------------------------AEVDPMHAKIVRRIH 210 (415)
Q Consensus 176 ~a~~~~~~~~-~~~~~~~~~~--------------------------------------------~~~~~~~~~g~t~L~ 210 (415)
+|+..+...+ ..++..+++. ..++..+..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 9987776665 3333444331 236677889999999
Q ss_pred HHHhcCCHHHHHHHHHCC-CCC----CCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHH
Q 014994 211 KALHSDDVELLKLLLDVS-NVT----LDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMV 285 (415)
Q Consensus 211 ~A~~~g~~~~v~~Ll~~g-~~~----~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~ 285 (415)
+|+..|+.+++++|+++| +++ ..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.++++
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 999999999999999999 553 2499999999999999999999986 9999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 014994 286 TLLSKGARASETTSDGQTAVAICRRMT 312 (415)
Q Consensus 286 ~Ll~~Gadin~~d~~g~tpL~~A~~~~ 312 (415)
+|+++||+++.+|..|.|||++|....
T Consensus 243 ~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 243 LLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHTTCCCCCCC--------------
T ss_pred HHHHcCCCcCcCCCcccccccccCCcc
Confidence 999999999999999999999998754
No 11
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.8e-37 Score=293.05 Aligned_cols=229 Identities=19% Similarity=0.140 Sum_probs=185.0
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhc-------------------
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIA------------------- 159 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~------------------- 159 (415)
.+.|+||.|+..|+.++|++|+++|+++|.+ .+..|.||||+|+..|+.++|++|++.++
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~-~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCcc-CCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 3678999999999999999999999999985 23469999999999999999999999854
Q ss_pred ------------CCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCC-------CCCCccccHHHHHHHhcCCHH
Q 014994 160 ------------GSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEV-------DPMHAKIVRRIHKALHSDDVE 219 (415)
Q Consensus 160 ------------~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~g~t~L~~A~~~g~~~ 219 (415)
+.+++..+..|.||+++|+..+...+ ..++..|+++... +..+..|.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 23556677788888888877766655 3334556554432 234556888888888888888
Q ss_pred HHHHHHHC-C-CC---CCCCchHHHHHHHCCC----HHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 014994 220 LLKLLLDV-S-NV---TLDDAYALHYAAACCS----PKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 290 (415)
Q Consensus 220 ~v~~Ll~~-g-~~---~~~g~tpL~~A~~~g~----~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 290 (415)
+|++||++ | ++ |..|.||||+++..++ ..++++|++. |+|+|.+|..|+||||+|+..|+.+++++|++.
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~ 261 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 261 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh
Confidence 88888864 5 44 4678888887776543 2456666664 899999999999999999999999999999985
Q ss_pred -CCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccc
Q 014994 291 -GARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNK 329 (415)
Q Consensus 291 -Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~ 329 (415)
|+++|.+|.+|+||||+|+..|+.++|++|+++|++++.
T Consensus 262 ~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 262 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 899999999999999999999999999999999998753
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=289.74 Aligned_cols=217 Identities=15% Similarity=0.087 Sum_probs=195.4
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHH
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVS 177 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a 177 (415)
..+.||||+|+..|+.+++++|++.|++++.+ +.+|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|
T Consensus 57 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 57 VSDWSPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPLFNA 132 (285)
T ss_dssp CCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEE--CTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHH
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCCCCCCCCHHHHH
Confidence 34678999999999999999999999999986 89999999999999999999999998 789999999999999999
Q ss_pred HHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHH
Q 014994 178 SEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKE 252 (415)
Q Consensus 178 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~ 252 (415)
+..+...+ ..++..|+++.. +..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSC----SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHcCHHHHHHHHHHCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99888877 444466666543 235999999999999999999999999 44 5789999999999999999999
Q ss_pred HHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhc-CCC
Q 014994 253 VLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQ-GQE 326 (415)
Q Consensus 253 Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~-g~~ 326 (415)
|++. |+++|. +..|+||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|+ ++..++++|+++ |++
T Consensus 209 Ll~~-ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 209 LLES-GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp HHHT-TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred HHHC-CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 9996 899995 899999999999999999999999999999999999999999999 568999999998 554
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.7e-37 Score=278.31 Aligned_cols=219 Identities=18% Similarity=0.102 Sum_probs=197.5
Q ss_pred HHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHH
Q 014994 101 IELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEI 180 (415)
Q Consensus 101 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~ 180 (415)
.++||.|+..|+.+.++.|++.+..... ..+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~ 83 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLAT-RTDQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDKDDAGWSPLHIAASA 83 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGG-CCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhh-cCCCCCCCHHHHHHHcCcHHHHHHHHHh--CCCCCCcCCCCCCHHHHHHHc
Confidence 4679999999999999999988766433 2388999999999999999999999998 778999999999999999998
Q ss_pred Hhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHh
Q 014994 181 KSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLN 255 (415)
Q Consensus 181 ~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~ 255 (415)
+...+ ..++..|+++ +..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|+.
T Consensus 84 ~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 160 (231)
T 3aji_A 84 GXDEIVKALLVKGAHV---NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLF 160 (231)
T ss_dssp TCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 88777 4444666554 455678999999999999999999999999 44 5679999999999999999999999
Q ss_pred cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 256 MDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 256 ~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|.+.|++
T Consensus 161 ~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 161 Y-KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp T-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred c-CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 5 899999999999999999999999999999999999999999999999999999999999999988764
No 14
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.2e-37 Score=281.78 Aligned_cols=224 Identities=19% Similarity=0.074 Sum_probs=204.2
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
.+.++||.|+..|+.+++++|++.|++++.. .+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHH
Confidence 3678999999999999999999999999874 367899999999999999999999998 7789999999999999999
Q ss_pred HHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC-------------CCCCchHHHHHHH
Q 014994 179 EIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV-------------TLDDAYALHYAAA 243 (415)
Q Consensus 179 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~-------------~~~g~tpL~~A~~ 243 (415)
..++..+ ..++..|+++ +..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+.
T Consensus 81 ~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 81 IAGSVKLLKLFLSKGADV---NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHTCHHHHHHHHHTTCCT---TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC---CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHH
Confidence 9888877 4444666554 456679999999999999999999999999 44 4568999999999
Q ss_pred CCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHH
Q 014994 244 CCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNE----PEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIE 319 (415)
Q Consensus 244 ~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~----~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~ 319 (415)
.|+.+++++|++..|++++..|..|+||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..|+.++++.
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 237 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 9999999999987799999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHh-cCCCcc
Q 014994 320 ASK-QGQETN 328 (415)
Q Consensus 320 l~~-~g~~~~ 328 (415)
|++ .|.+++
T Consensus 238 Ll~~~g~~~~ 247 (285)
T 1wdy_A 238 LLEQEHIEIN 247 (285)
T ss_dssp HHHSSSCCTT
T ss_pred HHhccCCCcc
Confidence 999 787765
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.3e-36 Score=289.24 Aligned_cols=225 Identities=21% Similarity=0.158 Sum_probs=198.4
Q ss_pred hhhhHHHHHHHHHcCcHHHHHHHHH-hCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHH
Q 014994 97 VNYVIELMYASAALQMKDRVFLLQH-WLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDE 175 (415)
Q Consensus 97 ~~~~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~ 175 (415)
..+..++||.|+..|+.+.++.|+. .+.+++.. |..|.||||+|+..|+.+++++|++. +.+++..+..|.||||
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~ 96 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPLNVNCHAS--DGRKSTPLHLAAGYNRVRIVQLLLQH--GADVHAKDKGGLVPLH 96 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS--STTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCcHHH
Confidence 3457789999999999998886665 48888876 88999999999999999999999998 7789999999999999
Q ss_pred HHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CCC----------------------
Q 014994 176 VSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NVT---------------------- 231 (415)
Q Consensus 176 ~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~---------------------- 231 (415)
+|+..++..+ ..++..|+++ +..|..|.||||+|+..|+.+++++|+++| +++
T Consensus 97 ~A~~~g~~~iv~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~ 173 (351)
T 3utm_A 97 NACSYGHYEVTELLLKHGACV---NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 173 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHH
Confidence 9998888877 4444666554 445678999999999999999999999998 432
Q ss_pred -----------------------------------CCCchHHHHHHHC---CCHHHHHHHHhcCCCCccccCCCCChHHH
Q 014994 232 -----------------------------------LDDAYALHYAAAC---CSPKVFKEVLNMDSAGLNLKDARGRTVLH 273 (415)
Q Consensus 232 -----------------------------------~~g~tpL~~A~~~---g~~~~v~~Ll~~~gadvn~~d~~g~TpLh 273 (415)
..|.||||+|+.. +..+++++|+.. |+++|.+|..|+||||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~ 252 (351)
T 3utm_A 174 TYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKNKDFMTPLH 252 (351)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTTCCCHHH
T ss_pred HhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCCCCCHHH
Confidence 3567999999999 557899999986 8999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccc
Q 014994 274 VAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNK 329 (415)
Q Consensus 274 ~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~ 329 (415)
+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|+++..
T Consensus 253 ~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 253 VAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998863
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=288.78 Aligned_cols=214 Identities=19% Similarity=0.147 Sum_probs=162.3
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCccc------ccccCCChhHHHHHHHcCcH-HHHHHHHHhhcCCCCCccccCCC
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVG------KALVEDVLPILVAAFHCQLN-MLRSYCIQRIAGSNLDNFCLERE 171 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~~~g~t~L~~A~~~g~~-~lv~~ll~~~~~~~~~~~~~~g~ 171 (415)
...++|+.|+..|+.++|++|++.|++... ...+..|.||||.|+..++. .++++|++. +.++|..|.+|.
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~--Gadvn~~d~~G~ 87 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS--GLGVNVTSQDGS 87 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------C--CCCTTCCCTTSC
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC--CCCCCCcCCCCC
Confidence 357899999999999999999999876421 11267899999999998885 588999987 789999999999
Q ss_pred ChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCC
Q 014994 172 LPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCS 246 (415)
Q Consensus 172 tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~ 246 (415)
||||+|+..+...+ ..++..|+++ +..+..|.||+|+|+..++.+++++|++.| ++ |..|+||||+|+..|+
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~~a~~---~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKHGANA---GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCc---CccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 99999999888776 4445666554 445678999999999999999999999999 54 5789999999999999
Q ss_pred HHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHH
Q 014994 247 PKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEA 320 (415)
Q Consensus 247 ~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l 320 (415)
.++|++||+. |+|+|.++..|+||||+|+..|+.++|++||++|||+|.+|.+|+||||+|+.+++ ++++|
T Consensus 165 ~~~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 165 HELVALLLQH-GASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp GGGHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred HHHHHHHHHC-CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc--HHHHH
Confidence 9999999986 99999999999999999999999999999999999999999999999999987654 44443
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1e-36 Score=272.55 Aligned_cols=217 Identities=17% Similarity=0.114 Sum_probs=188.9
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCc-cccCCCChHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDN-FCLERELPDEVSS 178 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~-~~~~g~tpl~~a~ 178 (415)
+.||||+|+..|+.+++++|++.|.+++.. .+..|.||||+|+..|+.+++++|++.++..+++. .+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQ-KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcccccc-CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 457899999999999999999999988662 38999999999999999999999999955466666 7899999999999
Q ss_pred HHHhhhhhh-ccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHH
Q 014994 179 EIKSLRVKS-NQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEV 253 (415)
Q Consensus 179 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~L 253 (415)
..+...+.. ++..|. ...++..+..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~~Ll~~g~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPL-KPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HHCCHHHHHHHHSSSS-CCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCC-CcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 888877743 445542 1345566779999999999999999999999999 44 56899999999999999999999
Q ss_pred HhcCC-CCccccCCCCChHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHh
Q 014994 254 LNMDS-AGLNLKDARGRTVLHVAARRNEPEVMVTLL-SKGARASETTSDGQTAVAICRRMTRRKDYIEASK 322 (415)
Q Consensus 254 l~~~g-advn~~d~~g~TpLh~A~~~~~~~~v~~Ll-~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~ 322 (415)
++. | +++|.+|..|+||||+|+..|+.+++++|+ ++|+|++.+|..|+||||+|+.. .+++++.+
T Consensus 160 l~~-g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 160 CGL-GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HTT-TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred Hhc-CcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 996 7 999999999999999999999999999999 88999999999999999999653 45555543
No 18
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=281.82 Aligned_cols=224 Identities=14% Similarity=0.049 Sum_probs=177.3
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCC-----------CcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCcc
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLL-----------GMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNF 166 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~-----------~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~ 166 (415)
..+.++||+|+..|+.+.+..++..+. .++.+ +..|.||||+|+..|+.+++++|++. +.+++..
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~ 88 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD--AVSDWSPMHEAAIHGHQLSLRNLISQ--GWAVNII 88 (285)
T ss_dssp -----------------------------CCSEECCCCTTCSS--SCCSCCHHHHHHHTTCHHHHHHHHHT--TCCSCEE
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCC--CccCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCc
Confidence 346788999999999766665544321 23333 78999999999999999999999998 7789999
Q ss_pred ccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-C--CCCCCchHHHHHH
Q 014994 167 CLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-N--VTLDDAYALHYAA 242 (415)
Q Consensus 167 ~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~--~~~~g~tpL~~A~ 242 (415)
+..|.||||+|+..+...+ ..++..|++ ++..|..|.||||+|+..|+.+++++|++.| + .+..|.||||+|+
T Consensus 89 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~ 165 (285)
T 3d9h_A 89 TADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAA 165 (285)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHH
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Confidence 9999999999999888877 444466655 4556679999999999999999999999999 4 3567999999999
Q ss_pred HCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHh
Q 014994 243 ACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASK 322 (415)
Q Consensus 243 ~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~ 322 (415)
..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++. |..|.||||+|+..|+.+++++|++
T Consensus 166 ~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 166 RRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp HHTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999986 899999999999999999999999999999999999995 8999999999999999999999999
Q ss_pred cCCCcccc
Q 014994 323 QGQETNKD 330 (415)
Q Consensus 323 ~g~~~~~~ 330 (415)
.|++++..
T Consensus 244 ~gad~~~~ 251 (285)
T 3d9h_A 244 FGADTQAK 251 (285)
T ss_dssp TTCCTTCC
T ss_pred CCCCCCCc
Confidence 99987643
No 19
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.6e-36 Score=284.75 Aligned_cols=220 Identities=21% Similarity=0.120 Sum_probs=194.3
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHH
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVS 177 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a 177 (415)
..+.||||+|+..|+.+++++|++.|++++.+ +..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~iv~~Ll~~--g~~~~~~~~~g~t~L~~A 131 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK--DKGGLVPLHNACSYGHYEVTELLLKH--GACVNAMDLWQFTPLHEA 131 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHH
Confidence 44678999999999999999999999999986 89999999999999999999999998 788999999999999999
Q ss_pred HHHHhhhh-hhccccccCccCCC---------------------------------------------------CCCccc
Q 014994 178 SEIKSLRV-KSNQESEANIAEVD---------------------------------------------------PMHAKI 205 (415)
Q Consensus 178 ~~~~~~~~-~~~~~~~~~~~~~~---------------------------------------------------~~~~~g 205 (415)
+..+...+ ..++..|+++...+ ..+..|
T Consensus 132 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 211 (351)
T 3utm_A 132 ASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSH 211 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTC
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCC
Confidence 98887776 44446777655433 234568
Q ss_pred cHHHHHHHhc---CCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHc
Q 014994 206 VRRIHKALHS---DDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARR 278 (415)
Q Consensus 206 ~t~L~~A~~~---g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~ 278 (415)
.||||+|+.. +..+++++|++.| ++ |..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..
T Consensus 212 ~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 212 ETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALA 290 (351)
T ss_dssp CCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHc
Confidence 8999999999 5589999999999 54 57899999999999999999999986 999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 279 NEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 279 ~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
|+.++|++|+++|+|++.+|..|+||+|+| +.+++++|.+.+..
T Consensus 291 ~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 291 GHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 999999999999999999999999999998 55777777776643
No 20
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.5e-36 Score=270.58 Aligned_cols=211 Identities=14% Similarity=0.011 Sum_probs=179.6
Q ss_pred CcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhc-c
Q 014994 111 QMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSN-Q 189 (415)
Q Consensus 111 g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~-~ 189 (415)
|+.+++++|++.|++++.. .|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..+...+... +
T Consensus 2 g~~~~i~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEETTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccc-cCCCCCchHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5667777888888888763 367788888888888888888888887 66777788888888888877776665333 3
Q ss_pred ccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccC
Q 014994 190 ESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKD 265 (415)
Q Consensus 190 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d 265 (415)
..++ ..++..+..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |++++.+|
T Consensus 79 ~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 155 (223)
T 2f8y_A 79 RNRA--TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQN 155 (223)
T ss_dssp HBTT--SCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred HcCC--CCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcC
Confidence 3332 245556778999999999999999999999999 44 56799999999999999999999996 99999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCc
Q 014994 266 ARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 266 ~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 327 (415)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|...
T Consensus 156 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 156 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999864
No 21
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.4e-36 Score=268.46 Aligned_cols=222 Identities=17% Similarity=0.141 Sum_probs=195.4
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccc-cCCCChHHH
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFC-LERELPDEV 176 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~-~~g~tpl~~ 176 (415)
+.+.++|+.|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++. +.+++... ..|.|||++
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYDVRQP--DKENVTLLHWAAINNRIDLVKYYISK--GAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBTTTTBCHHHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHhCCHHHHHHHHHc--CCcchhhcCCcCCChhHH
Confidence 45667899999999999999999999999886 89999999999999999999999998 55666444 459999999
Q ss_pred HHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCC-HHHH
Q 014994 177 SSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCS-PKVF 250 (415)
Q Consensus 177 a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~-~~~v 250 (415)
|+..+...+ ..++..|+++. ..+..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+..++ .+++
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPS---LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred HHHcCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHH
Confidence 998888776 44446665554 45578999999999999999999999999 44 5789999999997776 7788
Q ss_pred HHHHhcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCc
Q 014994 251 KEVLNMDSAGLNLKDA-RGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 251 ~~Ll~~~gadvn~~d~-~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 327 (415)
+.|+.. |++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|+..
T Consensus 160 ~~L~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 160 RLLLTF-NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHHT-TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHhc-CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 888875 899999997 9999999999999999999999999999999999999999999999999999999998753
No 22
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.5e-35 Score=273.44 Aligned_cols=196 Identities=18% Similarity=0.120 Sum_probs=175.9
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCC-CCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSN-LDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRI 209 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~-~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L 209 (415)
|.+|.||||+|+..|+.+++++|++.++... ++..+..|.||||+|+..++..+ ..++..|+++. ..+..|.|||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~g~tpL 82 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL---VAERGGHTAL 82 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS---CCCTTSCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHH
Confidence 8899999999999999999999999844322 78889999999999999988877 44457776654 5567999999
Q ss_pred HHHHhcCCHHHHHHHHHCC-C--------------------------------------------------CCCCCchHH
Q 014994 210 HKALHSDDVELLKLLLDVS-N--------------------------------------------------VTLDDAYAL 238 (415)
Q Consensus 210 ~~A~~~g~~~~v~~Ll~~g-~--------------------------------------------------~~~~g~tpL 238 (415)
|+|+..|+.+++++|+++| + .+..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 9999999999999999976 2 245789999
Q ss_pred HHHHHCCCHHHHHHHHhcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchH
Q 014994 239 HYAAACCSPKVFKEVLNMDSAGLNLKDA-RGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDY 317 (415)
Q Consensus 239 ~~A~~~g~~~~v~~Ll~~~gadvn~~d~-~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v 317 (415)
|+|+..|+.+++++|++. |++++..+. .|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 163 ~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence 999999999999999997 899999986 499999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCccccc
Q 014994 318 IEASKQGQETNKDR 331 (415)
Q Consensus 318 ~~l~~~g~~~~~~~ 331 (415)
++|+++|++++...
T Consensus 242 ~~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 242 RLLRAHGAPEPEDG 255 (282)
T ss_dssp HHHHHTTCCCCCCC
T ss_pred HHHHHcCCCcCcCC
Confidence 99999999987544
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-36 Score=279.93 Aligned_cols=205 Identities=20% Similarity=0.133 Sum_probs=185.3
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
.+.++||.|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYA--NVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCB--CTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHH
Confidence 3678999999999999999999999999986 89999999999999999999999998 7899999999999999999
Q ss_pred HHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC--C--------------------------
Q 014994 179 EIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS--N-------------------------- 229 (415)
Q Consensus 179 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~-------------------------- 229 (415)
..++..+ ..++..|+++. ..+..|.||||+|+..|+.+++++|+... +
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVG---AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIN 191 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HcCCHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcc
Confidence 9888877 44446676554 45679999999999999999998877542 1
Q ss_pred ---CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 014994 230 ---VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVA 306 (415)
Q Consensus 230 ---~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~ 306 (415)
.+..|.||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||
T Consensus 192 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 270 (299)
T 1s70_B 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFD 270 (299)
T ss_dssp CCCCTTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTT
T ss_pred hhhhcCCCCCHHHHHHHCCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 245799999999999999999999986 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHc
Q 014994 307 ICRRM 311 (415)
Q Consensus 307 ~A~~~ 311 (415)
+|+..
T Consensus 271 ~A~~~ 275 (299)
T 1s70_B 271 VADED 275 (299)
T ss_dssp SCCSG
T ss_pred HHHHH
Confidence 99664
No 24
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.6e-35 Score=275.93 Aligned_cols=219 Identities=18% Similarity=0.100 Sum_probs=188.1
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCcccc-------------------------------cccCCChhHHHHHHHcCcH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVGK-------------------------------ALVEDVLPILVAAFHCQLN 148 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------------------------------~~~~~g~t~L~~A~~~g~~ 148 (415)
+.||||+|+..|+.++|++|+++|++++.+ ..|..|.||||+|+..|+.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 678999999999999999999999876542 1267899999999999999
Q ss_pred HHHHHHHHhhcCCCCC----------ccccCCCChHHHHHHHHhhhhhhc-c-ccccCccCCCCCCccccHHHHHHHhcC
Q 014994 149 MLRSYCIQRIAGSNLD----------NFCLERELPDEVSSEIKSLRVKSN-Q-ESEANIAEVDPMHAKIVRRIHKALHSD 216 (415)
Q Consensus 149 ~lv~~ll~~~~~~~~~----------~~~~~g~tpl~~a~~~~~~~~~~~-~-~~~~~~~~~~~~~~~g~t~L~~A~~~g 216 (415)
++++++++. +++++ ..+..|.||||+|+..++..+... + ..|++ ++..|..|.|+||.++..+
T Consensus 139 ~~~~~ll~~--ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad---~n~~d~~g~t~l~~~~~~~ 213 (337)
T 4g8k_A 139 KALKFLYKR--GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD---VNACDNMGRNALIHALLSS 213 (337)
T ss_dssp HHHHHHHHT--TCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC---TTCCCTTSCCHHHHHHHHS
T ss_pred HHHHHHHHc--CCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC---cCccCCCCCcHHHHHHHHc
Confidence 999999998 44444 335578999999999888877443 3 34554 4556679999999887654
Q ss_pred C----HHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 014994 217 D----VELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLL 288 (415)
Q Consensus 217 ~----~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll 288 (415)
. ..++++|+++| ++ |..|+||||+|+..|+.++++.|+...|+++|.+|.+|+||||+|+..|+.++|++||
T Consensus 214 ~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll 293 (337)
T 4g8k_A 214 DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 293 (337)
T ss_dssp CTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3 46889999999 65 4678999999999999999999998779999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 289 SKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 289 ~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
++|||+|.+ ||||+|+..|+.++|++|+++|++++
T Consensus 294 ~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 294 KRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp TTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred HCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 999999865 59999999999999999999999875
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=4e-35 Score=263.08 Aligned_cols=193 Identities=15% Similarity=0.076 Sum_probs=173.5
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHh-CCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHW-LLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
+.||||+|+..|+.+++++|++. |++++.+ |..|.||||+|+..|+.+++++|++.++ ++..
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~------------- 65 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQR--GAMGETALHIAALYDNLEAAMVLMEAAP--ELVF------------- 65 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHCG--GGGG-------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCc--hhcc-------------
Confidence 45889999999999999999998 9999997 8999999999999999999999999833 2110
Q ss_pred HHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CCCC----------------CCchHHHHH
Q 014994 179 EIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NVTL----------------DDAYALHYA 241 (415)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~----------------~g~tpL~~A 241 (415)
...+..|..|.||||+|+..|+.+++++|+++| +++. .|+||||+|
T Consensus 66 -----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 128 (232)
T 2rfa_A 66 -----------------EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFA 128 (232)
T ss_dssp -----------------CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHH
T ss_pred -----------------ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHH
Confidence 122345678999999999999999999999999 5432 699999999
Q ss_pred HHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHH----HHHHhCCCCC------CCCCCCCCcHHHHHHHc
Q 014994 242 AACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVM----VTLLSKGARA------SETTSDGQTAVAICRRM 311 (415)
Q Consensus 242 ~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v----~~Ll~~Gadi------n~~d~~g~tpL~~A~~~ 311 (415)
+..|+.+++++|++. |+|+|.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..
T Consensus 129 ~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 129 ACVGSEEIVRLLIEH-GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHc
Confidence 999999999999986 999999999999999999999999988 9999999998 58999999999999999
Q ss_pred CCcchHHHHHhcCCCc
Q 014994 312 TRRKDYIEASKQGQET 327 (415)
Q Consensus 312 ~~~~~v~~l~~~g~~~ 327 (415)
|+.++++.|+++|..+
T Consensus 208 g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 208 GNIVMFQHLMQKRKHI 223 (232)
T ss_dssp TCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHhcCccc
Confidence 9999999999998654
No 26
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.9e-36 Score=278.57 Aligned_cols=212 Identities=10% Similarity=-0.068 Sum_probs=189.1
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
.+.||||+|+..|+.+++++|++.|++++.+ +|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFS--GLDDSQFDDKGNTALYYAV 103 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHT--TCCTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHH
Confidence 4678999999999999999999999999884 599999999999999999999998 7889999999999999999
Q ss_pred HHHhhhh-hhccccccCccCCCCCCccc-cHHHHHHHhcCCHHHHHHHHHCC-CC-CC-CCchHHHHHHHCCCHHHHHHH
Q 014994 179 EIKSLRV-KSNQESEANIAEVDPMHAKI-VRRIHKALHSDDVELLKLLLDVS-NV-TL-DDAYALHYAAACCSPKVFKEV 253 (415)
Q Consensus 179 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g-~t~L~~A~~~g~~~~v~~Ll~~g-~~-~~-~g~tpL~~A~~~g~~~~v~~L 253 (415)
..++..+ ..++..|+++. ..+..| .||||+|+..|+.+++++|+++| +. +. .|+||||+|+..|+.+++++|
T Consensus 104 ~~g~~~~v~~Ll~~ga~~~---~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWRLM---FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HTTCHHHHHHHHHHCGGGG---GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhcCCCCC---ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHH
Confidence 8888776 44456676654 455678 79999999999999999999999 33 44 789999999999999999999
Q ss_pred HhcCCCCccccCCCCChH-HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCc
Q 014994 254 LNMDSAGLNLKDARGRTV-LHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 254 l~~~gadvn~~d~~g~Tp-Lh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 327 (415)
++. |+++|.+|..|+|| ||+|+..|+.+++++|+++|+|++..|. .|+..|+.+++++|+++|.++
T Consensus 181 l~~-gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 181 LDY-MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEY 247 (285)
T ss_dssp HHH-HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHH
T ss_pred HHc-CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCC
Confidence 997 89999999999998 9999999999999999999999999883 567789999999999998754
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=265.58 Aligned_cols=191 Identities=16% Similarity=0.109 Sum_probs=173.0
Q ss_pred CChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHH
Q 014994 134 DVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKA 212 (415)
Q Consensus 134 ~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A 212 (415)
+|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++..+ ..++..|++ ++..|..|.||||+|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 76 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPLFNA 76 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHH
Confidence 589999999999999999999998 77899999999999999999888877 444466655 455667999999999
Q ss_pred HhcCCHHHHHHHHHCC-CC--CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 014994 213 LHSDDVELLKLLLDVS-NV--TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLS 289 (415)
Q Consensus 213 ~~~g~~~~v~~Ll~~g-~~--~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 289 (415)
+..|+.+++++|+++| ++ +..|.||||+|+..|+.++++.|++. |++++.+|..|+||||+|+..|+.+++++|++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999 44 56799999999999999999999996 89999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccccc
Q 014994 290 KGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNKDR 331 (415)
Q Consensus 290 ~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 331 (415)
+|+++|. +..|.||||+|+..|+.+++++|++.|++++...
T Consensus 156 ~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d 196 (261)
T 2xai_A 156 SGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKN 196 (261)
T ss_dssp HTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 9999995 8999999999999999999999999999876433
No 28
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.8e-35 Score=268.24 Aligned_cols=201 Identities=18% Similarity=0.153 Sum_probs=173.5
Q ss_pred hhHHHHHHHHHcCcHH----HHHHHHHhCCCccc----ccccCCChhHHHHHHHc---CcHHHHHHHHHhhcCCCCCccc
Q 014994 99 YVIELMYASAALQMKD----RVFLLQHWLLGMVG----KALVEDVLPILVAAFHC---QLNMLRSYCIQRIAGSNLDNFC 167 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~----~v~~Ll~~g~~~~~----~~~~~~g~t~L~~A~~~---g~~~lv~~ll~~~~~~~~~~~~ 167 (415)
++.|+||.|+..|+.+ ++++|++.|++++. + |..|.||||+|+.. |+.+++++|++.++ +++..+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~--d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~--~~~~~~ 76 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTE--GSTGKTCLMKAVLNLQDGVNACIMPLLQIDK--DSGNPK 76 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSB--TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHH--HTTCSS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccC--CCCCCCHHHHHHHccccchHHHHHHHHhcCC--cccchh
Confidence 3679999999999997 66788889999987 5 89999999999999 99999999999844 222111
Q ss_pred cCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CCC---CC----------
Q 014994 168 LERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NVT---LD---------- 233 (415)
Q Consensus 168 ~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~---~~---------- 233 (415)
. .. + ......|..|.||||+|+..|+.+++++|+++| +++ ..
T Consensus 77 ~-------------------~~----~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 132 (256)
T 2etb_A 77 P-------------------LV----N-AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTC 132 (256)
T ss_dssp C-------------------GG----G-CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSC
T ss_pred h-------------------hc----c-cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccccccccc
Confidence 0 00 0 112234567999999999999999999999999 554 33
Q ss_pred ---CchHHHHHHHCCCHHHHHHHHhc--CCCCccccCCCCChHHHHHHH--cCCHH-------HHHHHHhCCCCC-----
Q 014994 234 ---DAYALHYAAACCSPKVFKEVLNM--DSAGLNLKDARGRTVLHVAAR--RNEPE-------VMVTLLSKGARA----- 294 (415)
Q Consensus 234 ---g~tpL~~A~~~g~~~~v~~Ll~~--~gadvn~~d~~g~TpLh~A~~--~~~~~-------~v~~Ll~~Gadi----- 294 (415)
|+||||+|+..|+.+++++|++. +|+++|.+|..|+||||+|+. .++.+ ++++|+++|+++
T Consensus 133 ~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~ 212 (256)
T 2etb_A 133 FYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 212 (256)
T ss_dssp CCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999993 499999999999999999999 88888 999999999999
Q ss_pred --CCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCc
Q 014994 295 --SETTSDGQTAVAICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 295 --n~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 327 (415)
+.+|..|+||||+|+..|+.+++++|+++|..+
T Consensus 213 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 213 LEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999998754
No 29
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.9e-35 Score=267.88 Aligned_cols=196 Identities=18% Similarity=0.171 Sum_probs=145.9
Q ss_pred CcccccccCCChhHHHHHHHcC-------------cHHHHHHHHHhhcCCCCC-ccccCCCChHHHHHHHHhhhh-hhcc
Q 014994 125 GMVGKALVEDVLPILVAAFHCQ-------------LNMLRSYCIQRIAGSNLD-NFCLERELPDEVSSEIKSLRV-KSNQ 189 (415)
Q Consensus 125 ~~~~~~~~~~g~t~L~~A~~~g-------------~~~lv~~ll~~~~~~~~~-~~~~~g~tpl~~a~~~~~~~~-~~~~ 189 (415)
|+|.+ |.+|.||||+|+..| +.+++++|++. +.+++ ..+..|.||||+|+..+...+ ..++
T Consensus 2 dvn~~--d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~--g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 2 DVNVR--GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ--GASLHNQTDRTGETALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp ------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCC--CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc--cCCcccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 56665 899999999999988 89999999998 55665 458999999999999888877 4445
Q ss_pred ccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCcccc
Q 014994 190 ESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS--NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLK 264 (415)
Q Consensus 190 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~ 264 (415)
..|+++ +..|..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|+.. |+++|.+
T Consensus 78 ~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~ 153 (253)
T 1yyh_A 78 EASADA---NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAV 153 (253)
T ss_dssp HTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCB
T ss_pred HcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCc
Confidence 666554 455679999999999999999999999998 33 56899999999999999999999996 9999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 265 DARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 265 d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|+++.
T Consensus 154 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 154 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.3e-34 Score=251.15 Aligned_cols=187 Identities=17% Similarity=0.093 Sum_probs=167.8
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCC-CcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLL-GMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVS 177 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a 177 (415)
+..++||.|+..|+.+.++.|+..+. +++.. +..|.||||+|+..|+.+++++|++. +.++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~-------------- 65 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEV--DTEGNTPLNIAVHNNDIEIAKALIDR--GADI-------------- 65 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCT--------------
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCC--------------
Confidence 35678999999999999998888776 88886 88999999999999999999999987 4332
Q ss_pred HHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC--C---CCCCCchHHHHHHHCCCHHHHHH
Q 014994 178 SEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS--N---VTLDDAYALHYAAACCSPKVFKE 252 (415)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~---~~~~g~tpL~~A~~~g~~~~v~~ 252 (415)
+..+..|.||||+|+..|+.+++++|++.+ + .|..|.||||+|+..|+.+++++
T Consensus 66 ---------------------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 124 (201)
T 3hra_A 66 ---------------------NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124 (201)
T ss_dssp ---------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHH
T ss_pred ---------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHH
Confidence 234467899999999999999999999554 3 35679999999999999999999
Q ss_pred HHhcCCCCccccCCCCChHHHHHHHcCC-----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcC
Q 014994 253 VLNMDSAGLNLKDARGRTVLHVAARRNE-----PEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQG 324 (415)
Q Consensus 253 Ll~~~gadvn~~d~~g~TpLh~A~~~~~-----~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 324 (415)
|++..+++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 125 Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 125 LLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9998339999999999999999999998 99999999999999999999999999999999999999999887
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.4e-34 Score=257.01 Aligned_cols=197 Identities=18% Similarity=0.172 Sum_probs=178.8
Q ss_pred CcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCc
Q 014994 125 GMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHA 203 (415)
Q Consensus 125 ~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~ 203 (415)
+++.+ +.+|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..+...+ ..++..|++ ++..+.
T Consensus 3 ~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~ 75 (237)
T 3b7b_A 3 NFKME--HQNKRSPLHAAAEAGHVDICHMLVQA--GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL---VDPKDA 75 (237)
T ss_dssp CCCCS--SCCSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---CCCCCT
T ss_pred Ccccc--cCCCCCHHHHHHHcCcHHHHHHHHHc--CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC---CCCCCC
Confidence 44444 89999999999999999999999998 77899999999999999998888777 444466654 445667
Q ss_pred cccHHHHHHHhcCCHHHHHHHHHCC--C---CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHc
Q 014994 204 KIVRRIHKALHSDDVELLKLLLDVS--N---VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARR 278 (415)
Q Consensus 204 ~g~t~L~~A~~~g~~~~v~~Ll~~g--~---~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~ 278 (415)
.|.||||+|+..|+.+++++|++.| + .+..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..
T Consensus 76 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 154 (237)
T 3b7b_A 76 EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFS 154 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHC
Confidence 8999999999999999999999998 3 356799999999999999999999996 899999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccc
Q 014994 279 NEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNK 329 (415)
Q Consensus 279 ~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~ 329 (415)
|+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|++.|+++..
T Consensus 155 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 155 GCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp CCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999999999999998753
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.1e-33 Score=254.88 Aligned_cols=195 Identities=19% Similarity=0.127 Sum_probs=175.0
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHh--hcCCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQR--IAGSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRR 208 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~--~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~ 208 (415)
|.+|.||||+|+..|+.+++++|++. ..+.+++..+..|.||||+|+..+...+ ..+++.|+++. ..+..|.||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~ 82 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM---ALDRHGQTA 82 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc---ccCCCCCCH
Confidence 88999999999999999999999973 2377899999999999999998888877 44446665544 456799999
Q ss_pred HHHHHhcCCHHHHHHHHHCC-----C---CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccC-CCCChHHHHHHHcC
Q 014994 209 IHKALHSDDVELLKLLLDVS-----N---VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKD-ARGRTVLHVAARRN 279 (415)
Q Consensus 209 L~~A~~~g~~~~v~~Ll~~g-----~---~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d-~~g~TpLh~A~~~~ 279 (415)
||+|+..|+.+++++|++.+ + .+..|+||||+|+..|+.+++++|++. |++++..+ ..|+||||+|+..|
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHHHcC
Confidence 99999999999999999987 2 246799999999999999999999996 89999999 89999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcccc
Q 014994 280 EPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNKD 330 (415)
Q Consensus 280 ~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~ 330 (415)
+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|++++..
T Consensus 162 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 212 (241)
T 1k1a_A 162 SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 212 (241)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCc
Confidence 999999999999999999999999999999999999999999999987643
No 33
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.7e-35 Score=281.74 Aligned_cols=221 Identities=14% Similarity=0.103 Sum_probs=191.3
Q ss_pred hhhhHHHHHHHHHcCcHHHHHHHHHhCCCccccccc-CCChhHHHHHHHcCcHHHHHHHH--------HhhcCCCCCccc
Q 014994 97 VNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALV-EDVLPILVAAFHCQLNMLRSYCI--------QRIAGSNLDNFC 167 (415)
Q Consensus 97 ~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~L~~A~~~g~~~lv~~ll--------~~~~~~~~~~~~ 167 (415)
...+.|+||.|+..+. +++++|+. .+++.. | ..|.||||+|+..|+.+++++|+ +. +.+++..|
T Consensus 91 ~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~--d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~--ga~vn~~d 163 (373)
T 2fo1_E 91 EPESPIKLHTEAAGSY-AITEPITR--ESVNII--DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAA--GADVNAMD 163 (373)
T ss_dssp ---CCCHHHHHHHSSS-CCCSCCST--TTTTTC--CCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHT--CCCTTCCC
T ss_pred CCCCccHHHHHhcCCc-hHHHHhcc--cccccc--CCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhc--CCCCcCCC
Confidence 4456789999999665 78887765 455554 5 78999999999999987777766 55 88999999
Q ss_pred cCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC----C---CCCCCchHHH
Q 014994 168 LERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS----N---VTLDDAYALH 239 (415)
Q Consensus 168 ~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----~---~~~~g~tpL~ 239 (415)
..|.||||+|+..++..+ ..++..|+++. ..+..|.||||+|+..|+.+++++|+++| + .|..|+||||
T Consensus 164 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~ 240 (373)
T 2fo1_E 164 CDENTPLMLAVLARRRRLVAYLMKAGADPT---IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM 240 (373)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSC---CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcChHHHHHHHHHCCCCCc---ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHH
Confidence 999999999999988877 44557776654 45679999999999999999999999986 3 4678999999
Q ss_pred HHHHCC---CHHHHHHHHhcCCCCccc--------cCCCCChHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHH
Q 014994 240 YAAACC---SPKVFKEVLNMDSAGLNL--------KDARGRTVLHVAARRNEPEVMVTLLSKG-ARASETTSDGQTAVAI 307 (415)
Q Consensus 240 ~A~~~g---~~~~v~~Ll~~~gadvn~--------~d~~g~TpLh~A~~~~~~~~v~~Ll~~G-adin~~d~~g~tpL~~ 307 (415)
+|+..| +.+++++|++. |++++. .|..|+||||+|+..|+.++|++|+++| +++|.+|..|+||||+
T Consensus 241 ~A~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~ 319 (373)
T 2fo1_E 241 IVAHNEGRDQVASAKLLVEK-GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML 319 (373)
T ss_dssp HHHHSCSTTHHHHHHHHHHH-TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHH
T ss_pred HHHHhCCcchHHHHHHHHHC-CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHH
Confidence 999998 89999999997 899986 6779999999999999999999999885 9999999999999999
Q ss_pred HHHcCCcchHHHHHhcCCCcc
Q 014994 308 CRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 308 A~~~~~~~~v~~l~~~g~~~~ 328 (415)
|+..|+.+++++|++.|++++
T Consensus 320 A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 320 AAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp HHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHcCCHHHHHHHHHcCCCcc
Confidence 999999999999999999875
No 34
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=263.91 Aligned_cols=196 Identities=20% Similarity=0.114 Sum_probs=152.3
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcC------CCCCccccCCCChHHHHHHHHhhh--hhhccccccCccCCCCCCc
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAG------SNLDNFCLERELPDEVSSEIKSLR--VKSNQESEANIAEVDPMHA 203 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~------~~~~~~~~~g~tpl~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~ 203 (415)
|..+.+||+.|+..|+.++|++|++.++. ..++..+..|.|||+.|....... +..++..|++ +|..|.
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad---vn~~d~ 84 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG---VNVTSQ 84 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCC---TTCCCT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC---CCCcCC
Confidence 66789999999999999999999987432 135667888999999997665442 3445566655 456678
Q ss_pred cccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcC
Q 014994 204 KIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRN 279 (415)
Q Consensus 204 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~ 279 (415)
+|.||||+|+..|+.++|++|++.| ++ +..|.||||+|+..++.++++.|++. |+++|.+|..|+||||+|+..|
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS-NAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCC
Confidence 9999999999999999999999999 44 57899999999999999999999986 8999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccccc
Q 014994 280 EPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNKDR 331 (415)
Q Consensus 280 ~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 331 (415)
+.++|++||++|+|+|.++..|+||||+|+..|+.++|++|++.|++++...
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d 215 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLN 215 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999986443
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.5e-33 Score=251.94 Aligned_cols=195 Identities=17% Similarity=0.051 Sum_probs=171.0
Q ss_pred ChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHH
Q 014994 135 VLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKAL 213 (415)
Q Consensus 135 g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 213 (415)
|.||||+|+..|+.+++++|++.+. ...+..+..|.||||+|+..+...+ ..++..|++.......+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKP-SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCG-GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCc-cccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 6899999999999999999999843 2344589999999999999888777 4444666444333336679999999999
Q ss_pred hcCCHHHHHHHHHCC---C---CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 214 HSDDVELLKLLLDVS---N---VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 214 ~~g~~~~v~~Ll~~g---~---~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999997 2 356799999999999999999999996 999999999999999999999999999999
Q ss_pred HhCC-CCCCCCCCCCCcHHHHHHHcCCcchHHHHH-hcCCCccccc
Q 014994 288 LSKG-ARASETTSDGQTAVAICRRMTRRKDYIEAS-KQGQETNKDR 331 (415)
Q Consensus 288 l~~G-adin~~d~~g~tpL~~A~~~~~~~~v~~l~-~~g~~~~~~~ 331 (415)
+++| ++++.+|..|+||||+|+..|+.++++.|+ +.|+++....
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 9999 999999999999999999999999999999 8999876433
No 36
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.4e-33 Score=238.75 Aligned_cols=155 Identities=25% Similarity=0.231 Sum_probs=103.7
Q ss_pred HHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHH
Q 014994 102 ELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIK 181 (415)
Q Consensus 102 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~ 181 (415)
+.|+.|+..|+.++|++|++.|+++|.+ |.+|.||||+|+..++.++++++++. +.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~~~~ll~~--gad------------------- 62 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEVVKLLISK--GAD------------------- 62 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TCC-------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHhc--ccc-------------------
Confidence 4577777777777777777777777775 77777777777777777777777765 322
Q ss_pred hhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcC
Q 014994 182 SLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMD 257 (415)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 257 (415)
++.+|.+|.||||+|+..|+.++|++|+++| ++ |..|+||||+|+..|+.++|++|++.
T Consensus 63 ----------------~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~- 125 (169)
T 4gpm_A 63 ----------------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK- 125 (169)
T ss_dssp ----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-
T ss_pred ----------------hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-
Confidence 2233446667777777777777777777776 43 45666777777777777777777764
Q ss_pred CCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 014994 258 SAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASE 296 (415)
Q Consensus 258 gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~ 296 (415)
|+|++.+|.+|+||||+|+..|+.+++++|+++||+++.
T Consensus 126 gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 126 GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 677777777777777777777777777777777776653
No 37
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.1e-33 Score=238.09 Aligned_cols=153 Identities=29% Similarity=0.327 Sum_probs=139.2
Q ss_pred hHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcC
Q 014994 137 PILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSD 216 (415)
Q Consensus 137 t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g 216 (415)
++|+.|+..|+.++|+.|++. ++++ |.+|.+|.||||+|+..+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~--Gadv-----------------------------------n~~d~~g~t~l~~a~~~~ 48 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN--GADV-----------------------------------NASDSDGRTPLHHAAENG 48 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT--TCCT-----------------------------------TCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHC--CCCC-----------------------------------CCcCCCCCCHHHHHHHcC
Confidence 579999999999999999997 4333 345568999999999999
Q ss_pred CHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCC
Q 014994 217 DVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGA 292 (415)
Q Consensus 217 ~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Ga 292 (415)
+.+++++|++.| ++ |..|+||||+|+..|+.++|++||+. |+|+|.+|.+|+||||+|+..|+.++|++|+++|+
T Consensus 49 ~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 49 HKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999 54 57899999999999999999999996 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCc
Q 014994 293 RASETTSDGQTAVAICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 293 din~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 327 (415)
|++.+|.+|+||||+|+..|+.+++++|+++|++.
T Consensus 128 d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 128 DVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 99999999999999999999999999999999874
No 38
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.4e-34 Score=260.42 Aligned_cols=193 Identities=16% Similarity=0.165 Sum_probs=157.4
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcC--CCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAG--SNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRR 208 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~--~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~ 208 (415)
|.+|.||||+|+..|+.+++++|++.... .+++..+..|.||||+|+..+...+ ..++..|+++ +..+..|.||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~ 81 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP---ELRDFRGNTP 81 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS---CCCCTTCCCH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCH
Confidence 56677777777777776666666665332 2566667777777777776666655 3333555443 4455789999
Q ss_pred HHHHHhcCCHHHHHHHHHCC-C---------CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCC-CCChHHHHHHH
Q 014994 209 IHKALHSDDVELLKLLLDVS-N---------VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDA-RGRTVLHVAAR 277 (415)
Q Consensus 209 L~~A~~~g~~~~v~~Ll~~g-~---------~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~-~g~TpLh~A~~ 277 (415)
||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++. |++++.++. .|+||||+|+.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999987 2 246799999999999999999999997 899999998 99999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 278 RNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 278 ~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++.
T Consensus 161 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp TTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred cCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 999999999999999999999999999999999999999999999999764
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.4e-34 Score=264.18 Aligned_cols=217 Identities=11% Similarity=0.000 Sum_probs=184.6
Q ss_pred cCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhh-hhc
Q 014994 110 LQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRV-KSN 188 (415)
Q Consensus 110 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~ 188 (415)
.+..+++++|.+. +++.+ |.+|.||||+|+..|+.+++++|++. +.+++.. +|.||||+|+..++..+ ..+
T Consensus 10 ~~~~~v~~lL~~~--~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 10 WKSKQLKSFLSSK--DTFKA--DVHGHSASYYAIADNNVRLVCTLLNA--GALKNLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp CCHHHHHHHHHST--TTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TGGGSCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred cCHHHHHHHHHhC--CCCcc--CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 4556777777766 46665 89999999999999999999999998 6677766 59999999988887776 444
Q ss_pred cccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCC-chHHHHHHHCCCHHHHHHHHhcCCCCccc
Q 014994 189 QESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDD-AYALHYAAACCSPKVFKEVLNMDSAGLNL 263 (415)
Q Consensus 189 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g-~tpL~~A~~~g~~~~v~~Ll~~~gadvn~ 263 (415)
+..|+++ +..|..|.||||+|+..|+.+++++|+++| ++ +..| .||||+|+..|+.+++++|+.. |+++..
T Consensus 82 l~~ga~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~ 157 (285)
T 3kea_A 82 LFSGLDD---SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFD 157 (285)
T ss_dssp HHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTTCC
T ss_pred HHCCCCC---CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCcccc
Confidence 4667664 456679999999999999999999999999 43 5677 7999999999999999999986 787733
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH-HHHHHHcCCcchHHHHHhcCCCcccc------cccHHH
Q 014994 264 KDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTA-VAICRRMTRRKDYIEASKQGQETNKD------RLCIDV 336 (415)
Q Consensus 264 ~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tp-L~~A~~~~~~~~v~~l~~~g~~~~~~------~~~~~~ 336 (415)
. ..|+||||+|+..|+.+++++|+++|+++|.+|..|+|| ||+|+..|+.+++++|++.|++++.. ..+.++
T Consensus 158 ~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~a~~~~~~~i 236 (285)
T 3kea_A 158 L-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLENVLLDDAEI 236 (285)
T ss_dssp C-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTGGGGTTTCHHH
T ss_pred c-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCChhhhhcCCHHH
Confidence 3 289999999999999999999999999999999999998 99999999999999999999998633 334555
Q ss_pred HHH
Q 014994 337 LER 339 (415)
Q Consensus 337 ~~~ 339 (415)
++.
T Consensus 237 v~~ 239 (285)
T 3kea_A 237 AKM 239 (285)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
No 40
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-33 Score=262.11 Aligned_cols=221 Identities=14% Similarity=0.100 Sum_probs=188.5
Q ss_pred HHHHcCcHHHHHHHHHhCCCcccc-------cccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 106 ASAALQMKDRVFLLQHWLLGMVGK-------ALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 106 ~A~~~g~~~~v~~Ll~~g~~~~~~-------~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
.++..+..+.+..++....++... ..+..|.||||.|+..|+.++|++|++. +.+++..+..|.||||+|+
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~ 81 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER--GADINYANVDGLTALHQAC 81 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHH
Confidence 356666777777677665554321 1145788999999999999999999998 7889999999999999999
Q ss_pred HHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHH
Q 014994 179 EIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEV 253 (415)
Q Consensus 179 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~L 253 (415)
..++..+ ..++..|+++ +..|..|.||||+|+..|+.++|++|+++| ++ |..|.||||+|+..|+.++++.+
T Consensus 82 ~~g~~~~v~~Ll~~ga~~---~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~l 158 (299)
T 1s70_B 82 IDDNVDMVKFLVENGANI---NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158 (299)
T ss_dssp HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHH
Confidence 9888877 4445667554 456679999999999999999999999999 44 67899999999999999999988
Q ss_pred HhcCCCCccc--------------------------cCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 014994 254 LNMDSAGLNL--------------------------KDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAI 307 (415)
Q Consensus 254 l~~~gadvn~--------------------------~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~ 307 (415)
+...|++++. .+..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~ 238 (299)
T 1s70_B 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHA 238 (299)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHH
T ss_pred HhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 8766777654 56789999999999999999999999999999999999999999
Q ss_pred HHHcCCcchHHHHHhcCCCccccc
Q 014994 308 CRRMTRRKDYIEASKQGQETNKDR 331 (415)
Q Consensus 308 A~~~~~~~~v~~l~~~g~~~~~~~ 331 (415)
|+..|+.+++++|++.|+++....
T Consensus 239 A~~~~~~~~v~~Ll~~gad~~~~d 262 (299)
T 1s70_B 239 AAHWGKEEACRILVENLCDMEAVN 262 (299)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHhcCCHHHHHHHHHcCCCCCCcC
Confidence 999999999999999999876433
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=5e-34 Score=262.57 Aligned_cols=206 Identities=18% Similarity=0.127 Sum_probs=169.1
Q ss_pred hhhhhHHHHHHHHHcCcHHHHHHHHH----hCCCcccc--cccCCChhHHHHHHHc---CcHHHHHHHHHhhcCCCCCcc
Q 014994 96 SVNYVIELMYASAALQMKDRVFLLQH----WLLGMVGK--ALVEDVLPILVAAFHC---QLNMLRSYCIQRIAGSNLDNF 166 (415)
Q Consensus 96 ~~~~~~~~L~~A~~~g~~~~v~~Ll~----~g~~~~~~--~~~~~g~t~L~~A~~~---g~~~lv~~ll~~~~~~~~~~~ 166 (415)
....+.|+||+|+..|+.++|+.|++ .+++++.. ..+..|.||||+|+.+ |+.+++++|++.++. .+..
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~--~~~~ 86 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK--TDSL 86 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH--TTCH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc--ccch
Confidence 34568899999999999998887776 45555421 1267899999999987 999999999998542 1100
Q ss_pred ccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CCC---C----------
Q 014994 167 CLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NVT---L---------- 232 (415)
Q Consensus 167 ~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~---~---------- 232 (415)
..... ......|..|.||||+|+..|+.++|++|+++| +++ .
T Consensus 87 -------------------~~~i~-----~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 142 (273)
T 2pnn_A 87 -------------------KQFVN-----ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGR 142 (273)
T ss_dssp -------------------HHHHT-----CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSS
T ss_pred -------------------hHHhh-----cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccccccccc
Confidence 00000 112235568999999999999999999999999 553 3
Q ss_pred ----CCchHHHHHHHCCCHHHHHHHHhc--CCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCCC--
Q 014994 233 ----DDAYALHYAAACCSPKVFKEVLNM--DSAGLNLKDARGRTVLHVAARRNE---------PEVMVTLLSKGARAS-- 295 (415)
Q Consensus 233 ----~g~tpL~~A~~~g~~~~v~~Ll~~--~gadvn~~d~~g~TpLh~A~~~~~---------~~~v~~Ll~~Gadin-- 295 (415)
.|+||||+|+..|+.+++++||+. +|+++|.+|..|+||||+|+..|+ .+++++|+++|+++|
T Consensus 143 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~ 222 (273)
T 2pnn_A 143 PGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT 222 (273)
T ss_dssp CCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccc
Confidence 599999999999999999999993 499999999999999999999998 899999999999997
Q ss_pred -----CCCCCCCcHHHHHHHcCCcchHHHHHhcCC-Cc
Q 014994 296 -----ETTSDGQTAVAICRRMTRRKDYIEASKQGQ-ET 327 (415)
Q Consensus 296 -----~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~-~~ 327 (415)
.+|..|+||||+|+..|+.+++++|+++|+ +|
T Consensus 223 ~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP 260 (273)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--
T ss_pred cccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCc
Confidence 489999999999999999999999999998 55
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.9e-33 Score=256.64 Aligned_cols=203 Identities=15% Similarity=0.154 Sum_probs=170.9
Q ss_pred hhHHHHHHHHHcCcHHH----HHHHHHhCCCcccccc--cCCChhHHHHHH---HcCcHHHHHHHHHhhcCCCCCccccC
Q 014994 99 YVIELMYASAALQMKDR----VFLLQHWLLGMVGKAL--VEDVLPILVAAF---HCQLNMLRSYCIQRIAGSNLDNFCLE 169 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~----v~~Ll~~g~~~~~~~~--~~~g~t~L~~A~---~~g~~~lv~~ll~~~~~~~~~~~~~~ 169 (415)
+..++||.|+..|+.+. +++|++.|++++.... +..|.||||+|+ ..|+.+++++|++.++. .+...
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~--~~~~~-- 79 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEK--TGNMR-- 79 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHH--TTCHH--
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccc--ccchH--
Confidence 56789999999999995 5555569999987521 277999999999 67999999999998442 11000
Q ss_pred CCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CCC-----------------
Q 014994 170 RELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NVT----------------- 231 (415)
Q Consensus 170 g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~----------------- 231 (415)
.+ . ...++..|..|.||||+|+..|+.++|++|+++| +++
T Consensus 80 ------------~~-----~-----~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 80 ------------EF-----I-----NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp ------------HH-----H-----TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSC
T ss_pred ------------hh-----h-----cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccc
Confidence 00 0 0223445668999999999999999999999999 553
Q ss_pred CCCchHHHHHHHCCCHHHHHHHHhc--CCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCC------
Q 014994 232 LDDAYALHYAAACCSPKVFKEVLNM--DSAGLNLKDARGRTVLHVAARRNE---------PEVMVTLLSKGARA------ 294 (415)
Q Consensus 232 ~~g~tpL~~A~~~g~~~~v~~Ll~~--~gadvn~~d~~g~TpLh~A~~~~~---------~~~v~~Ll~~Gadi------ 294 (415)
..|+||||+|+..|+.+++++|++. +|+++|.+|..|+||||+|+..++ .+++++|+++|+++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~ 217 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL 217 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccch
Confidence 3699999999999999999999993 489999999999999999998887 79999999999999
Q ss_pred -CCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCc
Q 014994 295 -SETTSDGQTAVAICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 295 -n~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 327 (415)
+.+|..|+||||+|+..|+.+++++|+++|..+
T Consensus 218 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 218 EALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 679999999999999999999999999998764
No 43
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.3e-33 Score=269.01 Aligned_cols=195 Identities=12% Similarity=0.052 Sum_probs=173.9
Q ss_pred CCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCC
Q 014994 124 LGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMH 202 (415)
Q Consensus 124 ~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~ 202 (415)
.+++.. |..|.||||+|+..|+.++|++|++. +.+++..+..|.||||+|+..++..+ ..++..|++. .+
T Consensus 11 ~~~~~~--d~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----~~ 81 (364)
T 3ljn_A 11 LNRIKS--DDENMEKIHVAARKGQTDEVRRLIET--GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH-----SL 81 (364)
T ss_dssp -----C--CHHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-----CC
T ss_pred CCcccc--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-----cc
Confidence 444443 88899999999999999999999998 78999999999999999999988877 4444666633 23
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHHC----C-C--------------------CCCCCchHHHHHHHCC--CHHHHHHHHh
Q 014994 203 AKIVRRIHKALHSDDVELLKLLLDV----S-N--------------------VTLDDAYALHYAAACC--SPKVFKEVLN 255 (415)
Q Consensus 203 ~~g~t~L~~A~~~g~~~~v~~Ll~~----g-~--------------------~~~~g~tpL~~A~~~g--~~~~v~~Ll~ 255 (415)
.+|.||||+|+..|+.++|++|++. | + .|..|.||||+|+..| +.+++++|++
T Consensus 82 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 82 WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH
Confidence 4799999999999999999999998 4 2 3457899999999999 9999999999
Q ss_pred cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 256 MDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGAR-----ASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 256 ~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gad-----in~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
. |+++|.+|..|+||||+|+..|+.++|++|+++|++ +|.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 162 ~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 162 L-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp H-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred c-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 7 899999999999999999999999999999999999 99999999999999999999999999999998875
No 44
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.4e-32 Score=244.70 Aligned_cols=192 Identities=16% Similarity=0.048 Sum_probs=173.5
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIH 210 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~ 210 (415)
+..+.||||.|+..|+.++++.+++... ..++..+..|.||||+|+..+...+ ..++..|++ ++..|..|.||||
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 78 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADK-SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP---VNDKDDAGWSPLH 78 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCG-GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhch-hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC---CCCcCCCCCCHHH
Confidence 4567899999999999999999998743 3467789999999999999888877 444466654 4556679999999
Q ss_pred HHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 014994 211 KALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVT 286 (415)
Q Consensus 211 ~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~ 286 (415)
+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 999999999999999999 44 57899999999999999999999986 89999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 287 LLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 287 Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
|+++|++++.+|..|.||||+|+..|+.+++++|++.|++++
T Consensus 158 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 999999999999999999999999999999999999999875
No 45
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.4e-34 Score=258.82 Aligned_cols=207 Identities=12% Similarity=0.025 Sum_probs=179.9
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCC----CcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLL----GMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPD 174 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl 174 (415)
.+.||||+|+..|+.+++++|++.+. +++.. +..|.||||+|+..|+.+++++|++. +.+++..+..|.|||
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ--NNLQQTPLHLAVITNQPEIAEALLGA--GCDPELRDFRGNTPL 82 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCC--CTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCCCTTCCCHH
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhcc--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHH
Confidence 45688999999999999998888776 67775 88999999999999999999999998 788999999999999
Q ss_pred HHHHHHHhhhhh-hccccccCc---cCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CC-CCchHHHHHHHCC
Q 014994 175 EVSSEIKSLRVK-SNQESEANI---AEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TL-DDAYALHYAAACC 245 (415)
Q Consensus 175 ~~a~~~~~~~~~-~~~~~~~~~---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~-~g~tpL~~A~~~g 245 (415)
|+|+..+...+. .++..++++ ..++..+..|.||||+|+..|+.+++++|+++| ++ +. .|+||||+|+..|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999988887763 444555542 335667788999999999999999999999999 54 34 7999999999999
Q ss_pred CHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCC--CCCCCCCcHHHHHHH
Q 014994 246 SPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARAS--ETTSDGQTAVAICRR 310 (415)
Q Consensus 246 ~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin--~~d~~g~tpL~~A~~ 310 (415)
+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++.. ..+..|.||.+.+..
T Consensus 163 ~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 163 NPDLVSLLLKC-GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred CHHHHHHHHHc-CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 99999999996 99999999999999999999999999999999999876 788899998876554
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=7.2e-32 Score=240.21 Aligned_cols=191 Identities=17% Similarity=0.054 Sum_probs=171.8
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHH
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVS 177 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a 177 (415)
..+.||||+|+..|+.+++++|++.|++++.+ +..|.||||+|+..|+.+++++|++.+ ..+++..+..|.||||+|
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A 99 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNR-ATDLDARMHDGTTPLILA 99 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHBT-TSCTTCCCTTCCCHHHHH
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCcHHHHH
Confidence 34678999999999999999999999999986 899999999999999999999999973 237888999999999999
Q ss_pred HHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHH
Q 014994 178 SEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKE 252 (415)
Q Consensus 178 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~ 252 (415)
+..+...+ ..++..|++ ++..|..|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++
T Consensus 100 ~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 176 (223)
T 2f8y_A 100 ARLAVEGMLEDLINSHAD---VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKV 176 (223)
T ss_dssp HHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHhCcHHHHHHHHHcCCC---CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHH
Confidence 98887776 444466655 4556678999999999999999999999999 44 5789999999999999999999
Q ss_pred HHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCC
Q 014994 253 VLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARAS 295 (415)
Q Consensus 253 Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin 295 (415)
|++. |++++.+|..|.||||+|+..++.+++++|+++|+...
T Consensus 177 Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 177 LLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHHc-CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 9996 89999999999999999999999999999999999764
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-33 Score=266.14 Aligned_cols=196 Identities=15% Similarity=-0.007 Sum_probs=161.2
Q ss_pred HHHHHHHHcCcHHHHHHHHHhCCCccc-ccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHH
Q 014994 102 ELMYASAALQMKDRVFLLQHWLLGMVG-KALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEI 180 (415)
Q Consensus 102 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~ 180 (415)
+.+|+|+..+..+++++|++.|+++|. + |..|.||||+|+..|+.++|++|++. +++++..+..|.||||+|+..
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~--d~~g~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPV--DEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCC--STTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHS
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHh
Confidence 456889999999999999999999998 6 89999999999999999999999998 789999999999999999886
Q ss_pred Hh---hhh-hhccccccCccCCCCCCccccHHHHHHHh----cCCHHHHHHHHHC--------------------C-C--
Q 014994 181 KS---LRV-KSNQESEANIAEVDPMHAKIVRRIHKALH----SDDVELLKLLLDV--------------------S-N-- 229 (415)
Q Consensus 181 ~~---~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~--------------------g-~-- 229 (415)
++ ... ..++..+. ..++..|..|.||||+|+. .|+.+++++|++. | +
T Consensus 175 g~~~~~~~~~~ll~~~~--~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~ 252 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLY--PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 252 (327)
T ss_dssp SHHHHTTCHHHHHHHHG--GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------
T ss_pred cccccHHHHHHHHHhhh--ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcc
Confidence 55 221 22222221 2456677899999999999 9999999999987 5 3
Q ss_pred -CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 014994 230 -VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAIC 308 (415)
Q Consensus 230 -~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A 308 (415)
.+..|+||||+|+. +++|+.. ++|.+|..|+||||+|+..|+.++|++||++|||++.+|.+|+||||+|
T Consensus 253 ~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 253 DKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp -------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred cccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 35789999999985 8888875 6999999999999999999999999999999999999999999999999
Q ss_pred HHcC
Q 014994 309 RRMT 312 (415)
Q Consensus 309 ~~~~ 312 (415)
+..|
T Consensus 324 ~~~g 327 (327)
T 1sw6_A 324 AGLE 327 (327)
T ss_dssp CC--
T ss_pred HhcC
Confidence 8754
No 48
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=251.17 Aligned_cols=183 Identities=17% Similarity=0.098 Sum_probs=161.0
Q ss_pred HHHHHHHHcCcHHHHHHHHHhCCC--cccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCC-CCCccccCCCChHHHHH
Q 014994 102 ELMYASAALQMKDRVFLLQHWLLG--MVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGS-NLDNFCLERELPDEVSS 178 (415)
Q Consensus 102 ~~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~-~~~~~~~~g~tpl~~a~ 178 (415)
+++|.|+..|+.+.++.+++.+.+ +|.+ |.+|.||||+|+..|+.+++++|++. +. +++.
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~--d~~g~T~Lh~A~~~g~~~~v~~Ll~~--g~~~~~~------------- 140 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIA--DSNGNTALHYSVSHANFPVVQQLLDS--GVCKVDK------------- 140 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--SCCCTTC-------------
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCC--CCCCCCHHHHHHHCCCHHHHHHHHHC--CCCcCCC-------------
Confidence 456788889999999999888777 6664 89999999999999999999999997 32 3333
Q ss_pred HHHhhhhhhccccccCccCCCCCCccccHHHHHHH-----hcCCHHHHHHHHHCC-C---CCCCCchHHHHHHHCCCHHH
Q 014994 179 EIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKAL-----HSDDVELLKLLLDVS-N---VTLDDAYALHYAAACCSPKV 249 (415)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~g-~---~~~~g~tpL~~A~~~g~~~~ 249 (415)
.+..|.||||+|+ ..++.+++++|++.| . .+..|+||||+|+..|+.++
T Consensus 141 ----------------------~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~ 198 (276)
T 4hbd_A 141 ----------------------QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDV 198 (276)
T ss_dssp ----------------------CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred ----------------------CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 4455666677666 567889999999999 2 35679999999999999999
Q ss_pred HHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcC
Q 014994 250 FKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLS-KGARASETTSDGQTAVAICRRMTRRKDYIEASKQG 324 (415)
Q Consensus 250 v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~-~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 324 (415)
|++|++. |+|+|.+|..|+||||+|+..|+.++|++|++ .|+|++.+|..|+||||+|+..|+.+++++|++++
T Consensus 199 v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 199 VKALLAC-EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999996 99999999999999999999999999999999 89999999999999999999999999999999875
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.4e-31 Score=246.12 Aligned_cols=186 Identities=13% Similarity=0.108 Sum_probs=146.3
Q ss_pred hhhhHHHHHHHHHc---CcHHHHHHHHHhCCCc-------cc--ccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCC
Q 014994 97 VNYVIELMYASAAL---QMKDRVFLLQHWLLGM-------VG--KALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLD 164 (415)
Q Consensus 97 ~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~-------~~--~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~ 164 (415)
...+.||||+|+.. |+.+++++|++.|+++ +. ...|..|.||||+|+..|+.+++++|++. +.+++
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~--ga~~~ 128 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN--GADVQ 128 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT--TCCTT
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC--CCCcC
Confidence 45688999999987 9999999999998763 22 11256899999999999999999999998 77888
Q ss_pred ccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHH---CC-CC---CCCCchH
Q 014994 165 NFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLD---VS-NV---TLDDAYA 237 (415)
Q Consensus 165 ~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~g-~~---~~~g~tp 237 (415)
..+..+.. .....+..+..|.||||+|+..|+.+++++|++ .| ++ |..|+||
T Consensus 129 ~~~~~~~~---------------------~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tp 187 (273)
T 2pnn_A 129 AAANGDFF---------------------KKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTV 187 (273)
T ss_dssp CCBCSGGG---------------------SSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCH
T ss_pred cccccccc---------------------ccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcH
Confidence 77765410 011233455689999999999999999999999 88 44 6789999
Q ss_pred HHHHHHCCC---------HHHHHHHHhcCCCCcc-------ccCCCCChHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCC
Q 014994 238 LHYAAACCS---------PKVFKEVLNMDSAGLN-------LKDARGRTVLHVAARRNEPEVMVTLLSKGA-RASETTSD 300 (415)
Q Consensus 238 L~~A~~~g~---------~~~v~~Ll~~~gadvn-------~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Ga-din~~d~~ 300 (415)
||+|+..|+ .+++++|++. |+++| .+|..|+||||+|+..|+.+++++|+++|| |+......
T Consensus 188 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~ 266 (273)
T 2pnn_A 188 LHALVEVADNTVDNTKFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAA 266 (273)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------
T ss_pred HHHHHHccCcchhHHHHHHHHHHHHHHh-hhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhh
Confidence 999999988 7999999997 89997 489999999999999999999999999999 89888887
Q ss_pred CCcHHH
Q 014994 301 GQTAVA 306 (415)
Q Consensus 301 g~tpL~ 306 (415)
+.+|-+
T Consensus 267 ~~~~~~ 272 (273)
T 2pnn_A 267 AHHHHH 272 (273)
T ss_dssp ------
T ss_pred hhhccC
Confidence 777644
No 50
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=9.5e-31 Score=227.68 Aligned_cols=156 Identities=18% Similarity=0.153 Sum_probs=143.5
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
|..|.||||+|+..|+.+++++|++.++ + ++..+..|.||||+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~-----------------------------------~~~~~~~g~t~L~~ 74 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFD--K-----------------------------------LEDKDIEGSTALIW 74 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHC--C-----------------------------------TTCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcc--c-----------------------------------cccccccCccHHHH
Confidence 7899999999999999999999999732 2 22345679999999
Q ss_pred HHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (192)
T 2rfm_A 75 AVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKL 153 (192)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 44 56799999999999999999999986 999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCC
Q 014994 288 LSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQ 325 (415)
Q Consensus 288 l~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~ 325 (415)
+++|++++.+|..|.||||+|+..|+.+++++|++.|.
T Consensus 154 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 154 LELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191 (192)
T ss_dssp HHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhccC
Confidence 99999999999999999999999999999999998763
No 51
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=232.28 Aligned_cols=192 Identities=13% Similarity=0.041 Sum_probs=172.8
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIH 210 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~ 210 (415)
|..|.|||+.|+..|+.+++++|++. +.+++..+..|.||||+|+..+...+ ..++..|++.... .+..|.||||
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~~~t~L~ 81 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQL--GGDLNSTPLH 81 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--BTTTTBCHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhh--cCCcCCChhH
Confidence 78899999999999999999999998 77899999999999999998888776 4444666554433 2356899999
Q ss_pred HHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCC-HHHHH
Q 014994 211 KALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNE-PEVMV 285 (415)
Q Consensus 211 ~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~-~~~v~ 285 (415)
+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..++ .++++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSVDPTR 160 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChHHHHH
Confidence 999999999999999999 43 57899999999999999999999996 89999999999999999997766 89999
Q ss_pred HHHhCCCCCCCCCC-CCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 286 TLLSKGARASETTS-DGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 286 ~Ll~~Gadin~~d~-~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
+|++.|++++..+. .|.||||+|+..|+.++++.|++.|++++
T Consensus 161 ~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 204 (240)
T 3eu9_A 161 LLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD 204 (240)
T ss_dssp HHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999997 99999999999999999999999998875
No 52
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=4.9e-30 Score=217.94 Aligned_cols=155 Identities=15% Similarity=0.094 Sum_probs=142.6
Q ss_pred CChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHH
Q 014994 134 DVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKAL 213 (415)
Q Consensus 134 ~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 213 (415)
.|.||||.|+..|+.+++++|++. +.+ ++..|..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~--~~~-----------------------------------~~~~~~~g~t~L~~A~ 44 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ--ENV-----------------------------------INHTDEEGFTPLMWAA 44 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH--SSC-----------------------------------TTCCCTTSCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc--CCC-----------------------------------cCCCCCCCCCHHHHHH
Confidence 478999999999999999999997 322 3345568999999999
Q ss_pred hcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 014994 214 HSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLS 289 (415)
Q Consensus 214 ~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 289 (415)
..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|++
T Consensus 45 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 45 AHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 44 57889999999999999999999997 89999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 290 KGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 290 ~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
+|++++.+|..|.||||+|+..|+.+++++|++++..
T Consensus 124 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 124 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988754
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1e-29 Score=216.62 Aligned_cols=155 Identities=22% Similarity=0.207 Sum_probs=140.9
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
...+.|||+.|+..|+.+++++|++. +.++ +..|..|.||||+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~--g~~~-----------------------------------~~~~~~g~t~L~~ 53 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN--GADV-----------------------------------NAEDASGWTPLHL 53 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT--TCCT-----------------------------------TCCCTTSCCHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC--CCCC-----------------------------------CCCCCCCCCHHHH
Confidence 45678999999999999999999997 4332 3345678999999
Q ss_pred HHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|
T Consensus 54 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 132 (169)
T 2y1l_E 54 AAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVL 132 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 44 56899999999999999999999996 899999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcC
Q 014994 288 LSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQG 324 (415)
Q Consensus 288 l~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 324 (415)
+++|++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 133 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 133 LKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999876
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3.5e-30 Score=219.98 Aligned_cols=158 Identities=16% Similarity=0.095 Sum_probs=142.5
Q ss_pred ChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHh
Q 014994 135 VLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALH 214 (415)
Q Consensus 135 g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 214 (415)
+.||||.|+..|+.++++.+++.+. ..++..+..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~------------------------------------~~~~~~~~~g~t~L~~A~~ 45 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD------------------------------------NLVNKPDERGFTPLIWASA 45 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS------------------------------------GGGGCCCTTSCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc------------------------------------ccccCCCCCCCCHHHHHHH
Confidence 4689999999999999999998621 1233456789999999999
Q ss_pred cCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 014994 215 SDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 290 (415)
Q Consensus 215 ~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 290 (415)
.|+.+++++|+++| ++ +..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 46 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (172)
T 3v30_A 46 FGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR 124 (172)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999 44 57899999999999999999999986 899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccc
Q 014994 291 GARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNK 329 (415)
Q Consensus 291 Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~ 329 (415)
|++++.+|..|.||||+|+..|+.+++++|+++|.....
T Consensus 125 ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 125 GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999876543
No 55
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=6.2e-30 Score=216.02 Aligned_cols=155 Identities=20% Similarity=0.154 Sum_probs=138.8
Q ss_pred CCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHH
Q 014994 133 EDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKA 212 (415)
Q Consensus 133 ~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 212 (415)
+...||||.|+..|+.+++++|++. +.+ ++..+..|.||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~--~~~-----------------------------------~~~~~~~g~t~L~~A 45 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN--NVN-----------------------------------VNAQNGFGRTALQVM 45 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS--CCC-----------------------------------TTCCCTTSCCHHHHC
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC--CCC-----------------------------------ccccCccCccHHHHH
Confidence 4567999999999999999999986 322 233456789999999
Q ss_pred HhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 014994 213 LHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLL 288 (415)
Q Consensus 213 ~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll 288 (415)
+. |+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 46 ~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 46 KL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp CS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred Hc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99 9999999999999 44 56899999999999999999999986 8999999999999999999999999999999
Q ss_pred hCCCC-CCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 289 SKGAR-ASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 289 ~~Gad-in~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
++|++ ++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 124 ~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 124 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99998 699999999999999999999999999999974
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=6.1e-30 Score=218.43 Aligned_cols=163 Identities=13% Similarity=0.037 Sum_probs=142.6
Q ss_pred HHHHHHHHcCcHHHHHHHHHhCCC-cccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHH
Q 014994 102 ELMYASAALQMKDRVFLLQHWLLG-MVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEI 180 (415)
Q Consensus 102 ~~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~ 180 (415)
++||.|+..|+.++++.|++.+.+ ++.+ +..|.||||+|+..|+.+++++|++. +.++
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~----------------- 62 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKP--DERGFTPLIWASAFGEIETVRFLLEW--GADP----------------- 62 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCC--CTTSCCHHHHHHHTTCHHHHHHHHHH--TCCT-----------------
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCC--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCc-----------------
Confidence 569999999999999999999988 5664 88999999999999999999999997 4333
Q ss_pred HhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhc
Q 014994 181 KSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNM 256 (415)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~ 256 (415)
+..+..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++.
T Consensus 63 ------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (172)
T 3v30_A 63 ------------------HILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR 124 (172)
T ss_dssp ------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ------------------hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 234457899999999999999999999999 44 56899999999999999999999996
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q 014994 257 DSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTA 304 (415)
Q Consensus 257 ~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tp 304 (415)
|++++.+|..|+||||+|+..|+.+++++|+++|+++...+..|.||
T Consensus 125 -ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 125 -GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp -TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred -CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 89999999999999999999999999999999999999999999887
No 57
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=6.8e-30 Score=216.59 Aligned_cols=156 Identities=18% Similarity=0.142 Sum_probs=139.4
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
+..|.||||.|+..|+.++++.|++... ..++..+..|.||||+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~------------------------------------~~~~~~~~~g~t~L~~ 48 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQS------------------------------------VNCRDIEGRQSTPLHF 48 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTT------------------------------------TTCCCTTTTCCCHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCC------------------------------------CCccccccCCCCHHHH
Confidence 6778999999999999999999997521 1222345678999999
Q ss_pred HHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|
T Consensus 49 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 49 AAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 44 57899999999999999999999996 999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCC
Q 014994 288 LSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQ 325 (415)
Q Consensus 288 l~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~ 325 (415)
+++|++++.+|..|+||||+|+. |+.+++++|.+.|+
T Consensus 128 l~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 128 LQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999999999877 89999999999885
No 58
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=3.9e-29 Score=209.27 Aligned_cols=147 Identities=21% Similarity=0.116 Sum_probs=134.9
Q ss_pred ChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHh
Q 014994 135 VLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALH 214 (415)
Q Consensus 135 g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 214 (415)
..||||.|+..|+.+++++|++.+. +++ .+..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~--~~~------------------------------------~~~~g~t~L~~A~~ 43 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA--PFT------------------------------------TDWLGTSPLHLAAQ 43 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC--CCC------------------------------------CCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC--CCC------------------------------------cCCCCCCHHHHHHH
Confidence 5699999999999999999999732 211 24578999999999
Q ss_pred cCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 014994 215 SDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 290 (415)
Q Consensus 215 ~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 290 (415)
.|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 44 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 44 YGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999 44 56799999999999999999999986 999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCcchHHHH
Q 014994 291 GARASETTSDGQTAVAICRRMTRRKDYIEA 320 (415)
Q Consensus 291 Gadin~~d~~g~tpL~~A~~~~~~~~v~~l 320 (415)
|++++.+|..|.||||+|+..|+.+++++|
T Consensus 123 ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999876
No 59
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=3.6e-29 Score=224.20 Aligned_cols=157 Identities=19% Similarity=0.116 Sum_probs=141.9
Q ss_pred CChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHH
Q 014994 134 DVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKAL 213 (415)
Q Consensus 134 ~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 213 (415)
.|.||||+|+..|+.+++++|++.. + ..++..|..|.||||+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g-----------------------------------~~~~~~~~~g~t~L~~A~ 45 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-G-----------------------------------CEVHQRGAMGETALHIAA 45 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-C-----------------------------------SCTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-C-----------------------------------CCcccCCCCCCCHHHHHH
Confidence 4889999999999999999999851 1 233445678999999999
Q ss_pred hcCCHHHHHHHHHCC-CC--------CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCC-------------CCChH
Q 014994 214 HSDDVELLKLLLDVS-NV--------TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDA-------------RGRTV 271 (415)
Q Consensus 214 ~~g~~~~v~~Ll~~g-~~--------~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~-------------~g~Tp 271 (415)
..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++. |++++..+. .|+||
T Consensus 46 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~ 124 (232)
T 2rfa_A 46 LYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR-GASVSARATGSVFHYRPHNLIYYGEHP 124 (232)
T ss_dssp HTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSH
T ss_pred HcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCcceeecccccccCCCCH
Confidence 999999999999998 32 35799999999999999999999996 899999876 79999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchH----HHHHhcCCCc
Q 014994 272 LHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDY----IEASKQGQET 327 (415)
Q Consensus 272 Lh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v----~~l~~~g~~~ 327 (415)
||+|+..|+.+++++|+++|+|+|.+|..|+||||+|+..|+.+++ ++|++.|+.+
T Consensus 125 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 9999999999999999999999999999999999999999999988 9999999865
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.1e-29 Score=211.74 Aligned_cols=154 Identities=18% Similarity=0.123 Sum_probs=138.4
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
...++||.|+..|+.+++++|++.|++++.+ +..|.||||+|+. |+.+++++|++. +.++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~-~~~~~v~~Ll~~--g~~~--------------- 63 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQ--NGFGRTALQVMKL-GNPEIARRLLLR--GANP--------------- 63 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCC--CTTSCCHHHHCCS-SCHHHHHHHHHT--TCCT---------------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcccc--CccCccHHHHHHc-CcHHHHHHHHHc--CCCC---------------
Confidence 3568999999999999999999999999986 8999999999999 999999999997 4332
Q ss_pred HHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHH
Q 014994 179 EIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVL 254 (415)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll 254 (415)
+..+..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+
T Consensus 64 --------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 64 --------------------DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp --------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred --------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 234567899999999999999999999999 44 578999999999999999999999
Q ss_pred hcCCCC-ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCC
Q 014994 255 NMDSAG-LNLKDARGRTVLHVAARRNEPEVMVTLLSKGAR 293 (415)
Q Consensus 255 ~~~gad-vn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gad 293 (415)
+. |++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 124 ~~-g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 124 KH-TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HH-SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred Hc-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 97 787 699999999999999999999999999999986
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.2e-28 Score=210.03 Aligned_cols=154 Identities=15% Similarity=0.152 Sum_probs=139.8
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHH
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVS 177 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a 177 (415)
....++|+.|+..|+.+++++|++.|++++.+ +..|.||||+|+..|+.+++++|++. +.++
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~-------------- 73 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAE--DASGWTPLHLAAFNGHLEIVEVLLKN--GADV-------------- 73 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCT--------------
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCC--------------
Confidence 34678999999999999999999999999986 89999999999999999999999997 4332
Q ss_pred HHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHH
Q 014994 178 SEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEV 253 (415)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~L 253 (415)
+..|..|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|
T Consensus 74 ---------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 132 (169)
T 2y1l_E 74 ---------------------NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVL 132 (169)
T ss_dssp ---------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ---------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 234567899999999999999999999999 44 56799999999999999999999
Q ss_pred HhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC
Q 014994 254 LNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKG 291 (415)
Q Consensus 254 l~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~G 291 (415)
++. |++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 133 l~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 133 LKN-GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHc-CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 996 8999999999999999999999999999999987
No 62
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.4e-29 Score=217.68 Aligned_cols=159 Identities=18% Similarity=0.203 Sum_probs=143.3
Q ss_pred CCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHH
Q 014994 133 EDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKA 212 (415)
Q Consensus 133 ~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 212 (415)
..+.+|||.|+..|+.++++++++... ..++..+..|.||||+|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~------------------------------------~~~~~~~~~g~t~L~~A 46 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTE------------------------------------NDLNQGDDHGFSPLHWA 46 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTT------------------------------------SCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCc------------------------------------ccccccCCCCCCHHHHH
Confidence 467899999999999999999998521 23345667899999999
Q ss_pred HhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 014994 213 LHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLL 288 (415)
Q Consensus 213 ~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll 288 (415)
+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 47 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 47 CREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQY-KADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 44 57899999999999999999999996 8999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 289 SKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 289 ~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
++|++++.+|..|.||||+|+..++..+++.|++.|++++
T Consensus 126 ~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 126 ANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 9999999999999999999999999999999999999875
No 63
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.5e-28 Score=206.22 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=136.8
Q ss_pred ChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHh
Q 014994 135 VLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALH 214 (415)
Q Consensus 135 g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 214 (415)
+.||||.|+..|+.+++++|++. .+. .++..+..|.||||+ +.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~-----------------------------------~~~~~~~~g~t~L~~-~~ 44 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELV-----------------------------------HPDALNRFGKTALQV-MM 44 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCC-----------------------------------CTTCCCTTSCCHHHH-SC
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCc-----------------------------------CccccCCCCCcHHHH-HH
Confidence 57999999999999999999986 321 233455679999999 99
Q ss_pred cCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 014994 215 SDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 290 (415)
Q Consensus 215 ~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 290 (415)
.|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 45 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 45 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEH-GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 99999999999999 44 57899999999999999999999986 899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhc
Q 014994 291 GARASETTSDGQTAVAICRRMTRRKDYIEASKQ 323 (415)
Q Consensus 291 Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~ 323 (415)
++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 124 -~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 124 -SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp -SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred -cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999999999999999864
No 64
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=2.3e-30 Score=244.56 Aligned_cols=179 Identities=15% Similarity=0.054 Sum_probs=94.5
Q ss_pred HHHHHcCcHHHHHHHHHhhcCCCCCc-cccCCCChHHHHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHHhcCC
Q 014994 140 VAAFHCQLNMLRSYCIQRIAGSNLDN-FCLERELPDEVSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKALHSDD 217 (415)
Q Consensus 140 ~~A~~~g~~~lv~~ll~~~~~~~~~~-~~~~g~tpl~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~ 217 (415)
|+|+..+..++++.|++. +.+++. .+..|.||||+|+..++..+ ..+++.|+++ +.+|..|.||||+|+..|+
T Consensus 102 ~~a~~~~~~~~~~~l~~~--g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~---n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNT--QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR---LYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp --CHHHHHHHHHHHCTTS--CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TBCCTTCCCHHHHHHHSSH
T ss_pred HHHHHhhHHHHHHHHHhc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHhcc
Confidence 444444444555555444 444554 45555555555555444444 2222444332 2333455555555555554
Q ss_pred ---HHHHHHHHHCC-----CCCCCCchHHHHHHH----CCCHHHHHHHHhcC-------------------CCCccccCC
Q 014994 218 ---VELLKLLLDVS-----NVTLDDAYALHYAAA----CCSPKVFKEVLNMD-------------------SAGLNLKDA 266 (415)
Q Consensus 218 ---~~~v~~Ll~~g-----~~~~~g~tpL~~A~~----~g~~~~v~~Ll~~~-------------------gadvn~~d~ 266 (415)
.++++.|++.+ ..|..|+||||+|+. .|+.++++.|++.. |+++|.++.
T Consensus 177 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~ 256 (327)
T 1sw6_A 177 NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG 256 (327)
T ss_dssp HHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------------
T ss_pred cccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc
Confidence 33444444433 123445555555555 45555555554321 455555555
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccccc
Q 014994 267 RGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNKDR 331 (415)
Q Consensus 267 ~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 331 (415)
.|+||||+|+. +++|+++ ++|.+|..|+||||+|+..|+.+++++|++.|++++...
T Consensus 257 ~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d 313 (327)
T 1sw6_A 257 ERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN 313 (327)
T ss_dssp ---CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCC
T ss_pred cCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 55555555543 4555554 688999999999999999999999999999999986443
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=1.5e-28 Score=214.97 Aligned_cols=161 Identities=18% Similarity=0.178 Sum_probs=146.1
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
...+.||||.|+..|+.+.++.++.... ..++..|..|.||||+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~------------------------------------~~~~~~~~~g~t~L~~ 45 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTT------------------------------------YQVDEVDTEGNTPLNI 45 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTT------------------------------------CCTTCCCTTSCCHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCC------------------------------------CCCCCCCCCCCCHHHH
Confidence 4678899999999999999999998521 2344456689999999
Q ss_pred HHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+...+++++..|..|.||||+|+..|+.+++++|
T Consensus 46 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 125 (201)
T 3hra_A 46 AVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL 125 (201)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 54 567899999999999999999999777899999999999999999999999999999
Q ss_pred HhCC-CCCCCCCCCCCcHHHHHHHcCC-----cchHHHHHhcCCCcc
Q 014994 288 LSKG-ARASETTSDGQTAVAICRRMTR-----RKDYIEASKQGQETN 328 (415)
Q Consensus 288 l~~G-adin~~d~~g~tpL~~A~~~~~-----~~~v~~l~~~g~~~~ 328 (415)
+++| ++++.+|..|+||||+|+..++ .+++++|++.|++++
T Consensus 126 l~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 126 LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp HHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred HHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 9999 9999999999999999999998 899999999999876
No 66
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=2.7e-29 Score=228.55 Aligned_cols=160 Identities=19% Similarity=0.101 Sum_probs=137.7
Q ss_pred CChhHHHHHHHcCcHH----HHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHH
Q 014994 134 DVLPILVAAFHCQLNM----LRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRI 209 (415)
Q Consensus 134 ~g~t~L~~A~~~g~~~----lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 209 (415)
.|.||||.|+..|+.+ +++++++. +.+++... ...|..|.|||
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~-------------------------------~~~d~~g~t~L 47 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSA-------------------------------YTEGSTGKTCL 47 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGG-------------------------------GSBTTTTBCHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc--CCCccccc-------------------------------ccCCCCCCCHH
Confidence 4889999999999986 55666665 33332100 01456899999
Q ss_pred HHHHhc---CCHHHHHHHHHCC-CCC--------------CCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCC----
Q 014994 210 HKALHS---DDVELLKLLLDVS-NVT--------------LDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDAR---- 267 (415)
Q Consensus 210 ~~A~~~---g~~~~v~~Ll~~g-~~~--------------~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~---- 267 (415)
|+|+.. |+.++|++|++.| +++ ..|+||||+|+..|+.+++++|++. |+++|.+|..
T Consensus 48 ~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~ 126 (256)
T 2etb_A 48 MKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN-GADVHLRACGRFFQ 126 (256)
T ss_dssp HHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGS
T ss_pred HHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccccccccc
Confidence 999999 9999999999998 332 5699999999999999999999996 9999999986
Q ss_pred ---------CChHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCcHHHHHHH--cCCcc-------hHHHHHhcCCC
Q 014994 268 ---------GRTVLHVAARRNEPEVMVTLLS---KGARASETTSDGQTAVAICRR--MTRRK-------DYIEASKQGQE 326 (415)
Q Consensus 268 ---------g~TpLh~A~~~~~~~~v~~Ll~---~Gadin~~d~~g~tpL~~A~~--~~~~~-------~v~~l~~~g~~ 326 (415)
|+||||+|+..|+.+++++|++ +|+++|.+|..|+||||+|+. .++.+ ++++|++.|++
T Consensus 127 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~ 206 (256)
T 2etb_A 127 KHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR 206 (256)
T ss_dssp CCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999 999999999999999999999 66776 99999999876
Q ss_pred c
Q 014994 327 T 327 (415)
Q Consensus 327 ~ 327 (415)
+
T Consensus 207 ~ 207 (256)
T 2etb_A 207 L 207 (256)
T ss_dssp H
T ss_pred c
Confidence 5
No 67
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.4e-28 Score=208.90 Aligned_cols=156 Identities=15% Similarity=0.049 Sum_probs=141.2
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSE 179 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~ 179 (415)
+.||||.|+..|+.+++++|++.|.+++.+ +..|.||||+|+..|+.+++++|++. +.+++
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~--------------- 63 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHT--DEEGFTPLMWAAAHGQIAVVEFLLQN--GADPQ--------------- 63 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTT---------------
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCC---------------
Confidence 346799999999999999999999999986 89999999999999999999999997 43332
Q ss_pred HHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHh
Q 014994 180 IKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLN 255 (415)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~ 255 (415)
..+..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++
T Consensus 64 --------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 64 --------------------LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp --------------------CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34457899999999999999999999999 44 5689999999999999999999999
Q ss_pred cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCC
Q 014994 256 MDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARAS 295 (415)
Q Consensus 256 ~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin 295 (415)
. |++++.+|..|+||||+|+..|+.+++++|+++++++.
T Consensus 124 ~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 124 S-GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp T-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred c-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 5 99999999999999999999999999999999887654
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.6e-28 Score=213.48 Aligned_cols=153 Identities=18% Similarity=0.144 Sum_probs=139.8
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 99 YVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 99 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
.+.||||+|+..|+.+++++|++.|++++.+ +..|.||||+|+..|+.+++++|++. +.++
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~--------------- 94 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDKLEDK--DIEGSTALIWAVKNNRLGIAEKLLSK--GSNV--------------- 94 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHH--TCCT---------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccccc--cccCccHHHHHHHcCCHHHHHHHHHC--CCCC---------------
Confidence 3668999999999999999999999999986 88999999999999999999999997 4332
Q ss_pred HHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHH
Q 014994 179 EIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVL 254 (415)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll 254 (415)
+..|..|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|+
T Consensus 95 --------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 95 --------------------NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp --------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred --------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 234567899999999999999999999999 44 578999999999999999999999
Q ss_pred hcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC
Q 014994 255 NMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKG 291 (415)
Q Consensus 255 ~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~G 291 (415)
+. |++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 155 ~~-ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 155 EL-GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HC-CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 86 9999999999999999999999999999999875
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=2.5e-28 Score=209.94 Aligned_cols=162 Identities=13% Similarity=0.084 Sum_probs=144.7
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHh-CCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHW-LLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
..++||.|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++. +.++
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~--------------- 65 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQG--DDHGFSPLHWACREGRSAVVEMLIMR--GARI--------------- 65 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCT---------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCccccccc--CCCCCCHHHHHHHcCcHHHHHHHHHc--CCCC---------------
Confidence 45679999999999999999988 6677775 89999999999999999999999997 4333
Q ss_pred HHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHH
Q 014994 179 EIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVL 254 (415)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll 254 (415)
+..|..|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|+
T Consensus 66 --------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 66 --------------------NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp --------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred --------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 234567899999999999999999999999 44 578999999999999999999999
Q ss_pred hcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 014994 255 NMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDG 301 (415)
Q Consensus 255 ~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g 301 (415)
+. |++++.+|..|.||||+|+..++.+++++|+++|++++..+..+
T Consensus 126 ~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 126 AN-GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HT-TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred HC-CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 86 99999999999999999999999999999999999999877654
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.2e-27 Score=200.14 Aligned_cols=147 Identities=14% Similarity=0.100 Sum_probs=133.8
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSE 179 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~ 179 (415)
..++|+.|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++. +.++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~---------------- 60 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTT---DWLGTSPLHLAAQYGHFSTTEVLLRA--GVSR---------------- 60 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCC---CTTCCCHHHHHHHHTCHHHHHHHHTT--TCCT----------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCC----------------
Confidence 35789999999999999999999999875 88999999999999999999999986 3222
Q ss_pred HHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHh
Q 014994 180 IKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLN 255 (415)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~ 255 (415)
+..+..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++
T Consensus 61 -------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 121 (153)
T 1awc_B 61 -------------------DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp -------------------TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -------------------CCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 234567899999999999999999999999 44 5779999999999999999999999
Q ss_pred cCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 256 MDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 256 ~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
. |++++.+|..|+||||+|+..|+.+++++|
T Consensus 122 ~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 122 Y-GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp T-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred c-CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 6 999999999999999999999999999987
No 71
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.1e-30 Score=233.92 Aligned_cols=181 Identities=12% Similarity=-0.007 Sum_probs=155.4
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHH
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVS 177 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a 177 (415)
....++||+|+..|+.+++++|++.|++++.+ |..|.||||+|+..|+.+++++|++. +.+
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~--------------- 79 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDPSQP--NEEGITALHNAICGANYSIVDFLITA--GAN--------------- 79 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT--TCC---------------
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHC--CCC---------------
Confidence 34678899999999999999999999998886 88899999999999999999999886 433
Q ss_pred HHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CCC----CCCchHHHHH--HHCCCHHHH
Q 014994 178 SEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NVT----LDDAYALHYA--AACCSPKVF 250 (415)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~----~~g~tpL~~A--~~~g~~~~v 250 (415)
++..|..|.||||+|+..|+.+++++|++.| +++ ..|+||||+| +..|+.+++
T Consensus 80 --------------------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v 139 (229)
T 2vge_A 80 --------------------VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCA 139 (229)
T ss_dssp --------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHH
T ss_pred --------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHH
Confidence 3345567999999999999999999999999 542 5899999999 999999999
Q ss_pred HHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCcchHHHHH
Q 014994 251 KEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGAR--ASETTSDGQTAVAICRRMTRRKDYIEAS 321 (415)
Q Consensus 251 ~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gad--in~~d~~g~tpL~~A~~~~~~~~v~~l~ 321 (415)
++|++. |++++.+|..|.||||.++..+ .+++|++.|++ ++.+|.+|+||||+|+..|+.++|+...
T Consensus 140 ~~Ll~~-ga~~~~~~~~~~~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 140 TYLADV-EQSMGLMNSGAVYALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp HHHHHH-HHHTTTSGGGEEEESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred HHHHHc-CCCcccccCCchHHHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 999997 8999999999999999665544 33688999999 7889999999999999999998887544
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.8e-29 Score=226.29 Aligned_cols=182 Identities=13% Similarity=0.022 Sum_probs=121.5
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSE 179 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~ 179 (415)
+.|+||.|+..|..+.++.|+++|++++. +..|.||||.|+..|+.+++++|++. +.+
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~----------------- 62 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYE--VDD----------------- 62 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTST--TSS-----------------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHc--CCC-----------------
Confidence 57889999999999999999999999987 67889999999999999999999876 322
Q ss_pred HHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHh
Q 014994 180 IKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLN 255 (415)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~ 255 (415)
++..|..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++
T Consensus 63 ------------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 63 ------------------PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp ------------------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3344567889999999999999999999998 44 5678999999999999999999998
Q ss_pred cCCCCccccCCCCC-hHHHHH--HHcCCHHHHHHHHhCCCCCCCC---------CCCCCcHHHHHHHcCCcchHHHHHhc
Q 014994 256 MDSAGLNLKDARGR-TVLHVA--ARRNEPEVMVTLLSKGARASET---------TSDGQTAVAICRRMTRRKDYIEASKQ 323 (415)
Q Consensus 256 ~~gadvn~~d~~g~-TpLh~A--~~~~~~~~v~~Ll~~Gadin~~---------d~~g~tpL~~A~~~~~~~~v~~l~~~ 323 (415)
. |++++.++..|. ||||+| +..|+.+++++|+++|++++.. +..+.+|+++|...|. ++..+.+.
T Consensus 125 ~-ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~ 201 (239)
T 1ycs_B 125 S-GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHRE 201 (239)
T ss_dssp T-TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCC
T ss_pred c-CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEec
Confidence 6 899999988776 999998 7888999999999999988876 5567888887766554 34444433
Q ss_pred C
Q 014994 324 G 324 (415)
Q Consensus 324 g 324 (415)
+
T Consensus 202 ~ 202 (239)
T 1ycs_B 202 D 202 (239)
T ss_dssp T
T ss_pred C
Confidence 3
No 73
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=6.4e-28 Score=197.77 Aligned_cols=128 Identities=18% Similarity=0.122 Sum_probs=121.1
Q ss_pred CCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCC-CChH
Q 014994 197 EVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDAR-GRTV 271 (415)
Q Consensus 197 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~-g~Tp 271 (415)
.++..+..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+. |+.+++++|++. |++++.+|.. |+||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLH-GAEPNCADPATLTRP 81 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH-TCCSSCCBTTTTBCH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC-CCCCCCcCCCCCCCH
Confidence 45667789999999999999999999999999 44 5789999999999 999999999997 8999999999 9999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 272 LHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 272 Lh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999874
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=2.4e-27 Score=200.83 Aligned_cols=154 Identities=19% Similarity=0.108 Sum_probs=134.6
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHh-CCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHH
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHW-LLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEV 176 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~ 176 (415)
..+.++||.|+..|+.++++.|++. +.+++.. +..|.||||+|+..|+.+++++|++. +.+
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~-------------- 67 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI--EGRQSTPLHFAAGYNRVSVVEYLLQH--GAD-------------- 67 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT--TTTCCCHHHHHHHTTCHHHHHHHHHT--TCC--------------
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc--ccCCCCHHHHHHHcChHHHHHHHHhc--CCC--------------
Confidence 3468999999999999999999884 4555554 78899999999999999999999997 433
Q ss_pred HHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHH
Q 014994 177 SSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKE 252 (415)
Q Consensus 177 a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~ 252 (415)
++..|..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++
T Consensus 68 ---------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 126 (165)
T 3twr_A 68 ---------------------VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKL 126 (165)
T ss_dssp ---------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred ---------------------CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 2334567999999999999999999999999 44 5789999999999999999999
Q ss_pred HHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCC
Q 014994 253 VLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGA 292 (415)
Q Consensus 253 Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Ga 292 (415)
|++. |++++.+|..|+||||+|+. |+.+++++|+++||
T Consensus 127 Ll~~-ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 127 LLQH-GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHT-TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHc-CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9986 99999999999999999877 89999999999987
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=4.7e-28 Score=218.29 Aligned_cols=158 Identities=18% Similarity=0.130 Sum_probs=116.4
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
+..|.||||.|+..|+.++++.|++. +.+++ .+..|.||||+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~--g~~~~------------------------------------~~~~~~t~L~~ 43 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAH--GMRVK------------------------------------FNPLPLALLLD 43 (239)
T ss_dssp -------------------------------------------------------------------------CHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhcc--CCCcc------------------------------------cCchhhHHHHH
Confidence 34688999999999999999999987 32222 11368999999
Q ss_pred HHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|
T Consensus 44 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~L 122 (239)
T 1ycs_B 44 SSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFL 122 (239)
T ss_dssp HHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 44 57899999999999999999999997 899999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCC-cHHHHH--HHcCCcchHHHHHhcCCCcc
Q 014994 288 LSKGARASETTSDGQ-TAVAIC--RRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 288 l~~Gadin~~d~~g~-tpL~~A--~~~~~~~~v~~l~~~g~~~~ 328 (415)
+++|++++.++..|. ||||+| +..|+.+++++|++.|+++.
T Consensus 123 l~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 123 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 999999999998887 999999 78899999999999987764
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.6e-26 Score=193.79 Aligned_cols=149 Identities=19% Similarity=0.152 Sum_probs=133.5
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHh-CCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHW-LLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSS 178 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~ 178 (415)
+.++||.|+..|+.+++++|++. +.+++.. +..|.||||+ +..|+.+++++|++. +.++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~-~~~~~~~~v~~Ll~~--g~~~--------------- 61 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDAL--NRFGKTALQV-MMFGSTAIALELLKQ--GASP--------------- 61 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCC--CTTSCCHHHH-SCTTCHHHHHHHHHT--TCCT---------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCcccc--CCCCCcHHHH-HHcCCHHHHHHHHHC--CCCC---------------
Confidence 46899999999999999999998 3477775 8899999999 999999999999997 4333
Q ss_pred HHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHH
Q 014994 179 EIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVL 254 (415)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll 254 (415)
+..|..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+
T Consensus 62 --------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 121 (156)
T 1bd8_A 62 --------------------NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121 (156)
T ss_dssp --------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred --------------------CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHH
Confidence 234567899999999999999999999999 44 578999999999999999999999
Q ss_pred hcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhC
Q 014994 255 NMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 290 (415)
Q Consensus 255 ~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 290 (415)
+. ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 122 ~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 122 AE--SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TT--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred hc--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 85 99999999999999999999999999999975
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=2.6e-27 Score=215.87 Aligned_cols=162 Identities=18% Similarity=0.108 Sum_probs=137.5
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHH----hhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQ----RIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVR 207 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~----~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 207 (415)
+..+.||||.|+..|+.+.++.+++ . +.+++..+. ..+..|.|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~-------------------------------~~~~~g~t 48 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEF-------------------------------REPSTGKT 48 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGG-------------------------------SCTTTCCC
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhh-------------------------------hccCCCCc
Confidence 5678999999999999885544444 5 333332220 13457999
Q ss_pred HHHHHH---hcCCHHHHHHHHHCC-CC--------------CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccC----
Q 014994 208 RIHKAL---HSDDVELLKLLLDVS-NV--------------TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKD---- 265 (415)
Q Consensus 208 ~L~~A~---~~g~~~~v~~Ll~~g-~~--------------~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d---- 265 (415)
|||+|+ ..|+.+++++|++.| +. |..|+||||+|+..|+.++|++|++. |+++|..+
T Consensus 49 ~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~ 127 (260)
T 3jxi_A 49 CLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-GADVHAQARGRF 127 (260)
T ss_dssp HHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCEECC
T ss_pred HHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-CCCcCccccccc
Confidence 999999 779999999999987 21 23799999999999999999999996 99999998
Q ss_pred ----------CCCChHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCcHHHHHHHcCC---------cchHHHHHhc
Q 014994 266 ----------ARGRTVLHVAARRNEPEVMVTLLS---KGARASETTSDGQTAVAICRRMTR---------RKDYIEASKQ 323 (415)
Q Consensus 266 ----------~~g~TpLh~A~~~~~~~~v~~Ll~---~Gadin~~d~~g~tpL~~A~~~~~---------~~~v~~l~~~ 323 (415)
..|+||||+|+..|+.++|++|++ +|+++|.+|..|+||||+|+..++ .+++++|++.
T Consensus 128 ~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 207 (260)
T 3jxi_A 128 FQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK 207 (260)
T ss_dssp CSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh
Confidence 689999999999999999999999 999999999999999999999888 5899999999
Q ss_pred CCCc
Q 014994 324 GQET 327 (415)
Q Consensus 324 g~~~ 327 (415)
|+++
T Consensus 208 ga~~ 211 (260)
T 3jxi_A 208 CAKL 211 (260)
T ss_dssp HHHH
T ss_pred Cccc
Confidence 8765
No 78
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=7.1e-27 Score=215.20 Aligned_cols=155 Identities=17% Similarity=0.054 Sum_probs=138.7
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHhCC-CcccccccCCChhHHHHHH-----HcCcHHHHHHHHHhhcCCCCCccccCCC
Q 014994 98 NYVIELMYASAALQMKDRVFLLQHWLL-GMVGKALVEDVLPILVAAF-----HCQLNMLRSYCIQRIAGSNLDNFCLERE 171 (415)
Q Consensus 98 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~g~t~L~~A~-----~~g~~~lv~~ll~~~~~~~~~~~~~~g~ 171 (415)
..+.||||+|+..|+.+++++|++.|+ +++.. +..|.||||+|+ ..++.+++++|++. +.+
T Consensus 109 ~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~--~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~--g~~--------- 175 (276)
T 4hbd_A 109 SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQ--NRAGYSPIMLTALATLKTQDDIETVLQLFRL--GNI--------- 175 (276)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCC--CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH--SCT---------
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCC--CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc--CCC---------
Confidence 346799999999999999999999998 88886 899999999999 56779999999987 311
Q ss_pred ChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCH
Q 014994 172 LPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSP 247 (415)
Q Consensus 172 tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~ 247 (415)
.+..+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.
T Consensus 176 --------------------------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~ 229 (276)
T 4hbd_A 176 --------------------------NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHK 229 (276)
T ss_dssp --------------------------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred --------------------------ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCH
Confidence 2234457999999999999999999999999 54 57899999999999999
Q ss_pred HHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC
Q 014994 248 KVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKG 291 (415)
Q Consensus 248 ~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~G 291 (415)
+++++||+..|+|+|.+|..|+||||+|+..|+.+++++|++++
T Consensus 230 ~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 230 EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999559999999999999999999999999999999873
No 79
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.9e-26 Score=188.90 Aligned_cols=123 Identities=22% Similarity=0.187 Sum_probs=115.2
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHH
Q 014994 201 MHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAA 276 (415)
Q Consensus 201 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~ 276 (415)
....+.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHH
Confidence 3457899999999999999999999999 54 56799999999999999999999986 8999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcC
Q 014994 277 RRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQG 324 (415)
Q Consensus 277 ~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 324 (415)
..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999876
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=4.3e-27 Score=203.38 Aligned_cols=151 Identities=11% Similarity=0.015 Sum_probs=129.8
Q ss_pred ChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCC-ccccHHHHHHH
Q 014994 135 VLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMH-AKIVRRIHKAL 213 (415)
Q Consensus 135 g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~ 213 (415)
+.++|+.|+..|+.+.+..++.. + + +..+ ..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~--~--~-----------------------------------~~~~~~~g~T~Lh~A~ 46 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK--G--Y-----------------------------------EDKESVLKSNILYDVL 46 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH--S--S-----------------------------------SCHHHHHTTTHHHHHT
T ss_pred cccHHHHHHHcCCHHHHHHHHhc--C--c-----------------------------------ccccccCCCCHHHHHH
Confidence 45789999999998888888775 2 1 1112 46899999999
Q ss_pred hcCCH----HHHHHHHHCC-CC---CCCCchHHHHHHHCCC------HHHHHHHHhcCCCCccccCCCCC-hHHHHHHHc
Q 014994 214 HSDDV----ELLKLLLDVS-NV---TLDDAYALHYAAACCS------PKVFKEVLNMDSAGLNLKDARGR-TVLHVAARR 278 (415)
Q Consensus 214 ~~g~~----~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~------~~~v~~Ll~~~gadvn~~d~~g~-TpLh~A~~~ 278 (415)
..|+. +++++||++| ++ |..|+||||+|+..|+ .+++++||+. |+|+|.+|..|+ ||||+|+..
T Consensus 47 ~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~ 125 (186)
T 3t8k_A 47 RNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNY 125 (186)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGC
T ss_pred HcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHc
Confidence 99975 5999999999 55 5689999999999987 5789999986 999999999999 999999995
Q ss_pred C-----CHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCC
Q 014994 279 N-----EPEVMVTLLS-KGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQ 325 (415)
Q Consensus 279 ~-----~~~~v~~Ll~-~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~ 325 (415)
+ +.+++++|++ +|+|++.+|..|.||||+|+..|+..++++|.....
T Consensus 126 ~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 126 FVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp CSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 4 4569999999 999999999999999999999999999999987643
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.2e-26 Score=194.85 Aligned_cols=136 Identities=17% Similarity=0.091 Sum_probs=72.5
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
+..|.||||+|+..|+.+++++|++. +.+++ ..+..|.||||+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~-----------------------------------~~~~~g~t~L~~ 51 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA--GANPN-----------------------------------APNSYGRRPIQV 51 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTT-----------------------------------CCCSSSCCTTTS
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc--CCCCC-----------------------------------CCCCCCCCHHHH
Confidence 45566666666666666666666654 32222 223345555655
Q ss_pred HHhcCCHHHHHHHHHCC-CC---CCCCch-HHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---TLDDAY-ALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVT 286 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~~~g~t-pL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~ 286 (415)
|+ .|+.+++++|+++| ++ |..|+| |||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++
T Consensus 52 A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 52 MM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp SC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 53 56666666666666 33 345565 66666666666666666664 56666666666666666666666666666
Q ss_pred HHhCCCCCCCCCCCCCcHHH
Q 014994 287 LLSKGARASETTSDGQTAVA 306 (415)
Q Consensus 287 Ll~~Gadin~~d~~g~tpL~ 306 (415)
|+++|++++.+|..|.||.+
T Consensus 130 Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 130 LRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HSSCC---------------
T ss_pred HHHcCCCCCccCcCcCcccc
Confidence 66666666666666666655
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=8.5e-26 Score=181.81 Aligned_cols=122 Identities=30% Similarity=0.353 Sum_probs=116.5
Q ss_pred cccHHHHHHHhcCCHHHHHHHHHCC-C---CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcC
Q 014994 204 KIVRRIHKALHSDDVELLKLLLDVS-N---VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRN 279 (415)
Q Consensus 204 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~---~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~ 279 (415)
+|.||||+|+..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|+.. |++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcC
Confidence 4899999999999999999999998 4 357899999999999999999999996 8999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 280 EPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 280 ~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|++.|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999974
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.7e-26 Score=193.82 Aligned_cols=128 Identities=20% Similarity=0.143 Sum_probs=115.2
Q ss_pred CCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCCh-HHHH
Q 014994 200 PMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRT-VLHV 274 (415)
Q Consensus 200 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~T-pLh~ 274 (415)
..+..|.||||+|+..|+.++|++|+++| ++ |..|+||||+|+ .|+.+++++|++. |+++|.+|..|+| |||+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHH
Confidence 35568999999999999999999999999 44 568999999985 8999999999986 8999999999999 9999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccc
Q 014994 275 AARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNK 329 (415)
Q Consensus 275 A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~ 329 (415)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999998753
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=4.7e-26 Score=186.59 Aligned_cols=130 Identities=15% Similarity=0.054 Sum_probs=116.5
Q ss_pred CCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCC
Q 014994 123 LLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMH 202 (415)
Q Consensus 123 g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (415)
+++++.+ +..|.||||+|+..|+.+++++|++. +.++ +..|
T Consensus 2 ~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~-----------------------------------~~~~ 42 (136)
T 1d9s_A 2 SPGIHML--GGSSDAGLATAAARGQVETVRQLLEA--GADP-----------------------------------NALN 42 (136)
T ss_dssp CCCCSCC--CCCCSCHHHHHHHTTCHHHHHHHHHT--TCCT-----------------------------------TCCC
T ss_pred CCCccCC--CCCCccHHHHHHHcCCHHHHHHHHHc--CCCc-----------------------------------CCcC
Confidence 4677775 88999999999999999999999997 4332 3345
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCC-CchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHH
Q 014994 203 AKIVRRIHKALHSDDVELLKLLLDVS-NV---TLD-DAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAAR 277 (415)
Q Consensus 203 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~-g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~ 277 (415)
..|.||||+|+. |+.+++++|+++| ++ |.. |+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.
T Consensus 43 ~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~ 120 (136)
T 1d9s_A 43 RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEE 120 (136)
T ss_dssp TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHH
T ss_pred CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHH
Confidence 678999999999 9999999999999 54 456 89999999999999999999986 89999999999999999999
Q ss_pred cCCHHHHHHHHhCCCC
Q 014994 278 RNEPEVMVTLLSKGAR 293 (415)
Q Consensus 278 ~~~~~~v~~Ll~~Gad 293 (415)
.++.+++++|+++|||
T Consensus 121 ~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 121 QGHRDIARYLHAATGD 136 (136)
T ss_dssp HTCHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999999986
No 85
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.2e-27 Score=228.87 Aligned_cols=209 Identities=12% Similarity=-0.032 Sum_probs=153.4
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHhCCCccc-ccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCC---CCccccCCCChHH
Q 014994 100 VIELMYASAALQMKDRVFLLQHWLLGMVG-KALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSN---LDNFCLERELPDE 175 (415)
Q Consensus 100 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~---~~~~~~~g~tpl~ 175 (415)
..||||+|+..|+.++|++|++.|+.... ...+..|.||||+|+.+|+.++|++|++. +++ .+..+.+ .||||
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~--gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL--APTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS--CTTTHHHHHSHHH-HHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC--CCCccccccCCCC-CCHHH
Confidence 46999999999999999999999873211 01145688999999999999999999998 433 1222333 89999
Q ss_pred HHHHHHhhhh-hhccccccCccCCCCCCccccHHHHHHH-hcCCHHHHHHHHHCCCCCCCCchHHHHHHHCCCHHHHHHH
Q 014994 176 VSSEIKSLRV-KSNQESEANIAEVDPMHAKIVRRIHKAL-HSDDVELLKLLLDVSNVTLDDAYALHYAAACCSPKVFKEV 253 (415)
Q Consensus 176 ~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~-~~g~~~~v~~Ll~~g~~~~~g~tpL~~A~~~g~~~~v~~L 253 (415)
+|+..++..+ +.++..|+++.. +..|..|.||||+|+ ..|+.++|++|+++|. .|.||||+|+..|+.+++++|
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~-~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga---~~~taL~~Aa~~g~~evv~lL 244 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEAT-AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV---MLAYAEIHEFEYGEKYVNPFI 244 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHH-HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH---HHHHHHHCTTTTTTTTHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCccch-hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC---ccchHHHHHHHCCCHHHHHHH
Confidence 9999888887 444466766443 013457899999999 9999999999999772 378999999999999999999
Q ss_pred HhcCCCCccccCCCCChHHHHHHHcC---------------------------CHHHHHHHHhC---------CCCCCCC
Q 014994 254 LNMDSAGLNLKDARGRTVLHVAARRN---------------------------EPEVMVTLLSK---------GARASET 297 (415)
Q Consensus 254 l~~~gadvn~~d~~g~TpLh~A~~~~---------------------------~~~~v~~Ll~~---------Gadin~~ 297 (415)
++. |++++..+. ++++|+.+| ..+.+++|++. |+++|
T Consensus 245 ~~~-ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n-- 317 (376)
T 2aja_A 245 ARH-VNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPG-- 317 (376)
T ss_dssp HHH-HHHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTT--
T ss_pred Hhc-CcccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCC--
Confidence 886 788776542 333333333 34455666652 44443
Q ss_pred CCCCCcHHHHHHHcCCcchHHHHHhcC
Q 014994 298 TSDGQTAVAICRRMTRRKDYIEASKQG 324 (415)
Q Consensus 298 d~~g~tpL~~A~~~~~~~~v~~l~~~g 324 (415)
.+.||||+|+..|+.+++++|++.|
T Consensus 318 --~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 318 --DANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp --CCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred --CccHHHHHHHHcCcHHHHHHHHcCh
Confidence 4668999999999999999999875
No 86
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=4.4e-26 Score=203.93 Aligned_cols=140 Identities=21% Similarity=0.209 Sum_probs=123.3
Q ss_pred ccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccc
Q 014994 188 NQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNL 263 (415)
Q Consensus 188 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~ 263 (415)
++..|+++...+..+..+.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|++. |+++|.
T Consensus 4 ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~ 82 (229)
T 2vge_A 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITA-GANVNS 82 (229)
T ss_dssp ------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTC
T ss_pred hhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCC
Confidence 34567777777777888999999999999999999999998 54 57899999999999999999999986 899999
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHH--HHcCCcchHHHHHhcCCCcc
Q 014994 264 KDARGRTVLHVAARRNEPEVMVTLLSKGARASETT-SDGQTAVAIC--RRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 264 ~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d-~~g~tpL~~A--~~~~~~~~v~~l~~~g~~~~ 328 (415)
+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|++.|++++
T Consensus 83 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~ 150 (229)
T 2vge_A 83 PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMG 150 (229)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999987 6999999999 99999999999999988765
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2.5e-26 Score=188.38 Aligned_cols=125 Identities=20% Similarity=0.162 Sum_probs=112.2
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHH
Q 014994 201 MHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAA 276 (415)
Q Consensus 201 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~ 276 (415)
+|..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCCCHHHHHH
Confidence 5678999999999999999999999999 44 57899999999999999999999986 8999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 277 RRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 277 ~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
..|+.+++++|+++|++++.+|..|.||||+|+..+..+++.++.+.+.+
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 99999999999999999999999999999999988888887777665543
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=4.5e-26 Score=196.95 Aligned_cols=163 Identities=13% Similarity=0.068 Sum_probs=128.0
Q ss_pred HHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcH----HHHHHHHHhhcCCCCCccccCCCChHHHH
Q 014994 102 ELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLN----MLRSYCIQRIAGSNLDNFCLERELPDEVS 177 (415)
Q Consensus 102 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~----~lv~~ll~~~~~~~~~~~~~~g~tpl~~a 177 (415)
++|+.|+..|+.+.++.++..+.+... +..|.||||+|+.+|+. +++++|++. +++++.++..|+||||+|
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~~~---~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYEDKE---SVLKSNILYDVLRNNNDEARYKISMFLINK--GADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSCHH---HHHTTTHHHHHTTCSCHHHHHHHHHHHHHT--TCCSSCCCTTCCCTHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccccc---ccCCCCHHHHHHHcCCcchHHHHHHHHHHC--CCCCCCCCCCCCcHHHHH
Confidence 469999999999999999988765432 47899999999999984 599999998 666666665555555554
Q ss_pred HHHHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCc-hHHHHHHHCCC-----H
Q 014994 178 SEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDA-YALHYAAACCS-----P 247 (415)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~-tpL~~A~~~g~-----~ 247 (415)
+..+...+ .+..+++++|+++| ++ |..|+ ||||+|+..+. .
T Consensus 83 ~~~~~~~~-----------------------------~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~ 133 (186)
T 3t8k_A 83 FQGGGNDI-----------------------------TGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMI 133 (186)
T ss_dssp HHHCTTCH-----------------------------HHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHH
T ss_pred HHcCCcch-----------------------------hhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHH
Confidence 33221100 01258999999999 65 45788 99999999553 5
Q ss_pred HHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 014994 248 KVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETT 298 (415)
Q Consensus 248 ~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d 298 (415)
+++++||..+|+|+|.+|..|+||||+|+..|+.++|++|+++..+.+.++
T Consensus 134 ~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 134 PLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 688999984599999999999999999999999999999998876666554
No 89
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=5.1e-25 Score=177.08 Aligned_cols=108 Identities=26% Similarity=0.270 Sum_probs=100.1
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHH
Q 014994 202 HAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAAR 277 (415)
Q Consensus 202 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~ 277 (415)
+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK-GADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHH
Confidence 357899999999999999999999999 44 56899999999999999999999986 89999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 014994 278 RNEPEVMVTLLSKGARASETTSDGQTAVAICRR 310 (415)
Q Consensus 278 ~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~ 310 (415)
.|+.+++++|+++|++++.+|..|+||||+|..
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999999943
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=7.6e-24 Score=170.27 Aligned_cols=122 Identities=30% Similarity=0.335 Sum_probs=110.6
Q ss_pred CChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHH
Q 014994 134 DVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKAL 213 (415)
Q Consensus 134 ~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 213 (415)
+|.||||+|+..|+.+++++|++. +.++ +..+..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~-----------------------------------~~~~~~g~t~L~~A~ 43 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA--GADV-----------------------------------NAKDKNGRTPLHLAA 43 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH--TCCT-----------------------------------TCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc--CCCC-----------------------------------CCcCCCCCcHHHHHH
Confidence 588999999999999999999997 4232 234457899999999
Q ss_pred hcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 014994 214 HSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLS 289 (415)
Q Consensus 214 ~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 289 (415)
..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++
T Consensus 44 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 44 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 999999999999999 44 57899999999999999999999986 89999999999999999999999999999999
Q ss_pred CCCC
Q 014994 290 KGAR 293 (415)
Q Consensus 290 ~Gad 293 (415)
+|||
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 9996
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.4e-23 Score=193.23 Aligned_cols=191 Identities=15% Similarity=0.051 Sum_probs=144.0
Q ss_pred ccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHH
Q 014994 131 LVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIH 210 (415)
Q Consensus 131 ~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 210 (415)
.|..+.++|+++...|+....+++...... ....+...+....+....+ ..+..... -....+.......++|+
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~-~~~~kP~~~s~~~~~~~fI---~aKYl~~~--f~~~~~~~~~~~l~~l~ 135 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPS-EDPVKPNPGSDMIARKDYI---TAKYMERR--YARKKHADTAAKLHSLC 135 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCS-SSCCSCCTTCCHHHHHHHH---HHHHTTCT--TSCCCSSSHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCCh-hhcCCCCCCCCHHHHHHHH---HHHHHHhh--cccccccccchhhhhhh
Confidence 378899999999999997766655432111 0000111111222211111 11111100 00111222234578999
Q ss_pred HHHhcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHHC---CCHHHHHHHHhcCCCCccccCCCCChHHHHHHH
Q 014994 211 KALHSDDVELLKLLLDVS-NV---------TLDDAYALHYAAAC---CSPKVFKEVLNMDSAGLNLKDARGRTVLHVAAR 277 (415)
Q Consensus 211 ~A~~~g~~~~v~~Ll~~g-~~---------~~~g~tpL~~A~~~---g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~ 277 (415)
.|+..|+.+.+..+++.| ++ +..|+||||+|+.. |+.+++++|++. |+++|.+|..|+||||+|+.
T Consensus 136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTALHYCCL 214 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHHHHHHH
T ss_pred hHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHHHHHHH
Confidence 999999999999999999 43 46799999999999 899999999997 99999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 278 RNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 278 ~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
.|+.++|++||++|||++.+|.+|.||||+|+..|+.+++++|++.|+...
T Consensus 215 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 215 TDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999988643
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=2.3e-26 Score=219.99 Aligned_cols=176 Identities=12% Similarity=-0.015 Sum_probs=141.5
Q ss_pred HHHHHHHHH-cCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHH
Q 014994 101 IELMYASAA-LQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSE 179 (415)
Q Consensus 101 ~~~L~~A~~-~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~ 179 (415)
.+.+++|.. ++.+++++++++.|.+ +.||||+|+..|+.++|++|++.++.
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~---------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~------------------- 117 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIK---------SEVICFVAAITGCSSALDTLCLLLTS------------------- 117 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCC---------HHHHHHHHHHHCCHHHHHHHTTC--C-------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCC---------cCCHHHHHHHcCCHHHHHHHHHcCCc-------------------
Confidence 345666665 5788888888877543 45899999999999999999886321
Q ss_pred HHhhhhhhccccccCccCCCCCCccccHHHHHHHhcCCHHHHHHHHHCC-C-----CCCCCchHHHHHHHCCCHHHHHHH
Q 014994 180 IKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALHSDDVELLKLLLDVS-N-----VTLDDAYALHYAAACCSPKVFKEV 253 (415)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~-----~~~~g~tpL~~A~~~g~~~~v~~L 253 (415)
....+..+..|.||||+|+..|+.++|++|+++| + ++..++||||+||..|+.++|++|
T Consensus 118 ---------------~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~L 182 (376)
T 2aja_A 118 ---------------DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 182 (376)
T ss_dssp ---------------CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ---------------HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 0111223457889999999999999999999998 4 233348999999999999999999
Q ss_pred HhcCCCCccc--cCCCCChHHHHHH-HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCc
Q 014994 254 LNMDSAGLNL--KDARGRTVLHVAA-RRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQET 327 (415)
Q Consensus 254 l~~~gadvn~--~d~~g~TpLh~A~-~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 327 (415)
++. |++++. .|..|+||||+|+ ..|+.++|++|+++|++ |.||||+|+..|+.+++++|++.|++.
T Consensus 183 l~~-ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 183 CEL-APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp HHS-CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred HHc-CCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 986 899887 8888999999999 99999999999998853 789999999999999999999888654
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=9.7e-25 Score=194.13 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=112.2
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHH
Q 014994 201 MHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAA 276 (415)
Q Consensus 201 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~ 276 (415)
.+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+...|+++|.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 4457899999999999999999999999 44 5789999999999999999999998668999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCcc
Q 014994 277 RRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 277 ~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 328 (415)
..|+.++|++|+++|++++.+|..|+||||+|+..|+.++++.+...|+...
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 9999999999999999999999999999999999999999999999988753
No 94
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.2e-23 Score=172.15 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=109.3
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
...+.||||+|+..|+.+++++|++. +.+ ++..|..|.||||+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~-----------------------------------~~~~~~~g~t~L~~ 53 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN--GAD-----------------------------------VNAKDEYGLTPLYL 53 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT--TCC-----------------------------------TTCCCTTSCCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc--CCC-----------------------------------CCCcCCCCCCHHHH
Confidence 56689999999999999999999997 423 23345679999999
Q ss_pred HHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|
T Consensus 54 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 54 ATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999999 54 57899999999999999999999996 999999999999999999999999999999
Q ss_pred HhCC
Q 014994 288 LSKG 291 (415)
Q Consensus 288 l~~G 291 (415)
+++|
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 9987
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=3.7e-24 Score=184.58 Aligned_cols=121 Identities=26% Similarity=0.300 Sum_probs=108.7
Q ss_pred CccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccC-CCCChHHHHHH
Q 014994 202 HAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKD-ARGRTVLHVAA 276 (415)
Q Consensus 202 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d-~~g~TpLh~A~ 276 (415)
+..|.||||+|+..|+.+++++|++ | ++ |..|+||||+|+..|+.+++++|++. |+++|.++ ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHH
Confidence 4579999999999999999999999 7 44 57899999999999999999999986 99999998 89999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcC
Q 014994 277 RRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQG 324 (415)
Q Consensus 277 ~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 324 (415)
..|+.+++++|+++|++++.+|..|+||||+|+..++......++..+
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a 166 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFG 166 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHH
Confidence 999999999999999999999999999999999977655444444443
No 96
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=5.2e-23 Score=156.68 Aligned_cols=93 Identities=31% Similarity=0.359 Sum_probs=84.0
Q ss_pred CCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 014994 233 DDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMT 312 (415)
Q Consensus 233 ~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~ 312 (415)
+|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 478999999999999999999986 8999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHhcCCC
Q 014994 313 RRKDYIEASKQGQE 326 (415)
Q Consensus 313 ~~~~v~~l~~~g~~ 326 (415)
+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999998863
No 97
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1.9e-23 Score=188.72 Aligned_cols=107 Identities=28% Similarity=0.348 Sum_probs=99.5
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccC-CCCChHHHHHHH
Q 014994 203 AKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKD-ARGRTVLHVAAR 277 (415)
Q Consensus 203 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d-~~g~TpLh~A~~ 277 (415)
..|.||||+|+..|+.+++++|++ | ++ |..|+||||+|+..|+.++|++|+.. |+++|.++ ..|+||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHH
Confidence 478999999999999999999999 7 44 57899999999999999999999986 89999998 789999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 014994 278 RNEPEVMVTLLSKGARASETTSDGQTAVAICRRM 311 (415)
Q Consensus 278 ~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~ 311 (415)
.|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREI 154 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999854
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.2e-23 Score=172.24 Aligned_cols=130 Identities=16% Similarity=0.090 Sum_probs=108.2
Q ss_pred CCCcccccccCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCC
Q 014994 123 LLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMH 202 (415)
Q Consensus 123 g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (415)
|+|+.. |..|.||||+|+..|+.+++++|++. +.+ ++..|
T Consensus 1 G~d~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~-----------------------------------~~~~~ 40 (137)
T 3c5r_A 1 GIDPFT---NHRGETLLHIASIKGDIPSVEYLLQN--GSD-----------------------------------PNVKD 40 (137)
T ss_dssp ---CCC---CTTCCCHHHHHHHHTCHHHHHHHHHT--TCC-----------------------------------SCCCC
T ss_pred CCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHc--CCC-----------------------------------CCcCC
Confidence 566633 89999999999999999999999987 423 23355
Q ss_pred ccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHc
Q 014994 203 AKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARR 278 (415)
Q Consensus 203 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~ 278 (415)
..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..
T Consensus 41 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 41 HAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhc
Confidence 67999999999999999999999999 44 56789999999999999999999986 999999999999999999999
Q ss_pred CCHHHHHHHHhCCCC
Q 014994 279 NEPEVMVTLLSKGAR 293 (415)
Q Consensus 279 ~~~~~v~~Ll~~Gad 293 (415)
+..+++++|.+.+..
T Consensus 120 ~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 120 SMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHSCC------
T ss_pred cHHHHHhhccccccC
Confidence 999999888876543
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=9.3e-23 Score=189.77 Aligned_cols=107 Identities=21% Similarity=0.221 Sum_probs=92.5
Q ss_pred CCccccHHHHHHHhc---CCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHH
Q 014994 201 MHAKIVRRIHKALHS---DDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLH 273 (415)
Q Consensus 201 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh 273 (415)
.+..|.||||+|+.. |+.+++++|+++| ++ |..|+||||+|+..|+.+++++||+. |+|++.+|..|+||||
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALD 264 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 456899999999997 8999999999999 54 57899999999999999999999996 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCc
Q 014994 274 VAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRR 314 (415)
Q Consensus 274 ~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~ 314 (415)
+|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 265 ~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 265 IARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999987 578999999998864
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=6.1e-23 Score=176.91 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=118.9
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
+..|.||||+|+..|+.++++.|++ +.+ ++..|..|.||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~-----------------------------------~~~~d~~g~t~L~~ 82 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE---DRD-----------------------------------VDAVDENGRTALLF 82 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT---TSC-----------------------------------TTCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh---cCC-----------------------------------CCCcCCCCCCHHHH
Confidence 5678999999999999999999998 322 23355689999999
Q ss_pred HHhcCCHHHHHHHHHCC-CC---C-CCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---T-LDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVT 286 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~-~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~ 286 (415)
|+..|+.+++++|+++| ++ + ..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..++.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~----- 156 (183)
T 3deo_A 83 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKT----- 156 (183)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHHT-----
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhccC-----
Confidence 99999999999999999 55 3 6799999999999999999999997 899999999999999999875432
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhc
Q 014994 287 LLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQ 323 (415)
Q Consensus 287 Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~ 323 (415)
..+.+||++|+..|+.++++.|.++
T Consensus 157 ------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 ------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp ------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 4567999999999999999998764
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=182.59 Aligned_cols=122 Identities=21% Similarity=0.249 Sum_probs=114.3
Q ss_pred cccHHHHHHHhcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHHC---CCHHHHHHHHhcCCCCccccCCCCCh
Q 014994 204 KIVRRIHKALHSDDVELLKLLLDVS-NV---------TLDDAYALHYAAAC---CSPKVFKEVLNMDSAGLNLKDARGRT 270 (415)
Q Consensus 204 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---------~~~g~tpL~~A~~~---g~~~~v~~Ll~~~gadvn~~d~~g~T 270 (415)
...++|+.|+..|+.+.++.|++.| ++ +..|+||||+|+.. |+.+++++||.. |+++|.+|..|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCC
Confidence 4568999999999999999999999 53 55789999999997 899999999997 8999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 271 VLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 271 pLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
|||+|+..|+.++|++||++|||++.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999998754
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=2.6e-22 Score=200.02 Aligned_cols=124 Identities=22% Similarity=0.238 Sum_probs=114.2
Q ss_pred ccHHHHHHHhcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHH---CCCHHHHHHHHhcCCCCccccCCCCChH
Q 014994 205 IVRRIHKALHSDDVELLKLLLDVS-NV---------TLDDAYALHYAAA---CCSPKVFKEVLNMDSAGLNLKDARGRTV 271 (415)
Q Consensus 205 g~t~L~~A~~~g~~~~v~~Ll~~g-~~---------~~~g~tpL~~A~~---~g~~~~v~~Ll~~~gadvn~~d~~g~Tp 271 (415)
..+.||.|+..|+.++|+.||+.| ++ +..|+||||+|+. .|+.+++++||+. |+|+|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcH
Confidence 347899999999999999999999 54 4579999999976 8999999999997 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCCccc
Q 014994 272 LHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQETNK 329 (415)
Q Consensus 272 Lh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~ 329 (415)
||+|+..|+.++|++||++|||+|.+|.+|+||||+|+..|+.+++++|+++|++++.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998864
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=5.9e-23 Score=182.56 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=105.2
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
+..|.||||+|+..|+.+++++|++. +.+ ++..|..|.||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~-----------------------------------~~~~~~~g~t~L~~ 112 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDN--RVG-----------------------------------VNGLDKAGSTALYW 112 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHT--TCC-----------------------------------TTCCCTTSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhC--CCC-----------------------------------ccccCCCCCCHHHH
Confidence 67789999999999999999999986 423 23345679999999
Q ss_pred HHhcCCHHHHHHHHHC-C-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 014994 212 ALHSDDVELLKLLLDV-S-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVT 286 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~-g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~ 286 (415)
|+..|+.++|++|++. | ++ |..|+||||+|+..|+.+++++||+. |++++.+|..|+||||+|+..++.++++.
T Consensus 113 A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~ 191 (222)
T 3ehr_A 113 ACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKK 191 (222)
T ss_dssp HHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHH
Confidence 9999999999999999 7 44 67899999999999999999999997 99999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCC
Q 014994 287 LLSKGARASETTSDGQ 302 (415)
Q Consensus 287 Ll~~Gadin~~d~~g~ 302 (415)
|++.|++.+..+..|+
T Consensus 192 l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 192 KQGTDAVRTLSNAEDY 207 (222)
T ss_dssp ----------------
T ss_pred Hhccchhhhccchhhh
Confidence 9999999988776553
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=3.9e-22 Score=190.01 Aligned_cols=123 Identities=20% Similarity=0.158 Sum_probs=115.6
Q ss_pred ccccHHHHHHHhc-CCHHHHHHHHHCC-CCC-----CCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHH
Q 014994 203 AKIVRRIHKALHS-DDVELLKLLLDVS-NVT-----LDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVA 275 (415)
Q Consensus 203 ~~g~t~L~~A~~~-g~~~~v~~Ll~~g-~~~-----~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A 275 (415)
..+.|+||+|+.. |+.+++++|+++| ++| ..|+||||+|+..|+.+++++||.. |+++|.+|..|+||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHH
Confidence 4567999999999 9999999999999 553 6789999999999999999999996 999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 276 ARRNEPEVMVTLLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 276 ~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+..+..
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999988744
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.2e-21 Score=149.02 Aligned_cols=89 Identities=37% Similarity=0.454 Sum_probs=83.2
Q ss_pred cccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcC
Q 014994 204 KIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRN 279 (415)
Q Consensus 204 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~ 279 (415)
+|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999 44 57899999999999999999999986 9999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q 014994 280 EPEVMVTLLSKGAR 293 (415)
Q Consensus 280 ~~~~v~~Ll~~Gad 293 (415)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=2.7e-22 Score=158.99 Aligned_cols=104 Identities=24% Similarity=0.264 Sum_probs=91.3
Q ss_pred CCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHH
Q 014994 201 MHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAA 276 (415)
Q Consensus 201 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~ 276 (415)
+|.+|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK-GADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT-TCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHH
Confidence 5678999999999999999999999998 44 56789999999999999999999986 8999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 014994 277 RRNEPEVMVTLLSKGARASETTSDGQTAV 305 (415)
Q Consensus 277 ~~~~~~~v~~Ll~~Gadin~~d~~g~tpL 305 (415)
..|+.+++++|+++|+|+|.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999988874
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=9.6e-22 Score=177.45 Aligned_cols=139 Identities=18% Similarity=0.168 Sum_probs=108.8
Q ss_pred cCCChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHH
Q 014994 132 VEDVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHK 211 (415)
Q Consensus 132 ~~~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 211 (415)
+..|.||||+|+..|+.+++++|++ +.++ +..|..|.||||+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~-----------------------------------~~~d~~g~t~L~~ 83 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE---DRDV-----------------------------------DAVDENGRTALLF 83 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT---TCCT-----------------------------------TCBCTTSCBHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc---CCCC-----------------------------------CCcCCCCCCHHHH
Confidence 4467888888888888888888877 2222 2344567888888
Q ss_pred HHhcCCHHHHHHHHHCC-CC---C-CCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 014994 212 ALHSDDVELLKLLLDVS-NV---T-LDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVT 286 (415)
Q Consensus 212 A~~~g~~~~v~~Ll~~g-~~---~-~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~ 286 (415)
|+..|+.++|++|+++| ++ + ..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..++.
T Consensus 84 A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~~----- 157 (244)
T 3ui2_A 84 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKT----- 157 (244)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHHTT-----
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHHHhc-----
Confidence 88888888888888888 44 2 5588999999999999999999886 899999999999999999864332
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCcchHHHHHhcCCC
Q 014994 287 LLSKGARASETTSDGQTAVAICRRMTRRKDYIEASKQGQE 326 (415)
Q Consensus 287 Ll~~Gadin~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 326 (415)
..+.||||+|+..|+.+++++|.+.+..
T Consensus 158 ------------~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 158 ------------TPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp ------------CCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred ------------cCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 3567899999999999999999887544
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=4.4e-21 Score=153.92 Aligned_cols=98 Identities=17% Similarity=0.092 Sum_probs=91.6
Q ss_pred CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 014994 230 VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICR 309 (415)
Q Consensus 230 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~ 309 (415)
.+..|.||||+|+..|+.++++.|++. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 456789999999999999999999996 8999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcchHHHHHhcCCCcc
Q 014994 310 RMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 310 ~~~~~~~v~~l~~~g~~~~ 328 (415)
..|+.+++++|++.|+++.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTT
T ss_pred HcCCHHHHHHHHHcCCCCC
Confidence 9999999999999998875
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1.1e-20 Score=188.17 Aligned_cols=139 Identities=18% Similarity=0.153 Sum_probs=110.5
Q ss_pred CChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHH
Q 014994 134 DVLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKAL 213 (415)
Q Consensus 134 ~g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 213 (415)
...+.||.|+..|+.+.++.|++. +.+++.... ....+..|.||||+|+
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~-----------------------------~~~~~~~g~t~Lh~A~ 179 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLP-----------------------------GPDAQAPEELVLHLAV 179 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBC-----------------------------CSSSCCSCBCHHHHHH
T ss_pred ccHHHHHHHHhccCHHHHHHHHhh--cccccCCCC-----------------------------CcccccccchHHHHHH
Confidence 345789999999999999999998 545543321 0113568999999996
Q ss_pred h---cCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 014994 214 H---SDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVT 286 (415)
Q Consensus 214 ~---~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~ 286 (415)
. .|+.++|++||++| ++ |..|+||||+|+..|+.++|++||+. |+|+|.+|..|+||||+|+..|+.+++++
T Consensus 180 ~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 258 (497)
T 3lvq_E 180 KVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEEL 258 (497)
T ss_dssp HTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHT-CCCCSCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 6 89999999999999 55 56899999999999999999999996 99999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHH
Q 014994 287 LLSKGARASETTSDGQTAVAICRR 310 (415)
Q Consensus 287 Ll~~Gadin~~d~~g~tpL~~A~~ 310 (415)
|+++||+++.. |+|.+..
T Consensus 259 Ll~~ga~~~~~------~~h~~~~ 276 (497)
T 3lvq_E 259 LEQAQAGTFAF------PLHVDYS 276 (497)
T ss_dssp HHHTCC------------------
T ss_pred HHHhCCCCCCC------cceeecc
Confidence 99999999874 5555443
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=9.8e-21 Score=180.33 Aligned_cols=145 Identities=17% Similarity=0.145 Sum_probs=109.5
Q ss_pred cCCChhHHHHHHHc-CcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHH
Q 014994 132 VEDVLPILVAAFHC-QLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIH 210 (415)
Q Consensus 132 ~~~g~t~L~~A~~~-g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 210 (415)
...+.|+||.|+.. |+.++++.|++. +.+++..+ .+..|.||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~---------------------------------~~~~g~TpLh 240 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAH--GADVNWVN---------------------------------GGQDNATPLI 240 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCC---------------------------------TTTTCCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHc--CCCCCccc---------------------------------cccCCCCHHH
Confidence 35678999999999 999999999987 54444222 1257899999
Q ss_pred HHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 014994 211 KALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVT 286 (415)
Q Consensus 211 ~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~ 286 (415)
+|+..|+.++|++|+++| ++ |..|+||||+|+..|+.+++++||.. |++++.+|..|+||||+|+..|+.+++++
T Consensus 241 ~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~l 319 (368)
T 3jue_A 241 QATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKR-GADLGARDSEGRDPLTIAMETANADIVTL 319 (368)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHCCCHHHHHH
Confidence 999999999999999999 55 57899999999999999999999996 99999999999999999999999999999
Q ss_pred HHhCC---CCCCCCCCCCCcHHHHHHHcC
Q 014994 287 LLSKG---ARASETTSDGQTAVAICRRMT 312 (415)
Q Consensus 287 Ll~~G---adin~~d~~g~tpL~~A~~~~ 312 (415)
|+..| ++....+..+.|+++++....
T Consensus 320 Ll~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 320 LRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHC-----------------------
T ss_pred HHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 99875 445566778899999887754
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=7.2e-21 Score=150.70 Aligned_cols=98 Identities=27% Similarity=0.367 Sum_probs=94.6
Q ss_pred CCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 014994 230 VTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAICR 309 (415)
Q Consensus 230 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A~ 309 (415)
.|..|+||||+|+..|+.++++.|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 477899999999999999999999986 8999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcchHHHHHhcCCCcc
Q 014994 310 RMTRRKDYIEASKQGQETN 328 (415)
Q Consensus 310 ~~~~~~~v~~l~~~g~~~~ 328 (415)
..|+.+++++|++.|++++
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHH
T ss_pred HCCCHHHHHHHHHcCCCCC
Confidence 9999999999999999875
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=8.2e-20 Score=167.91 Aligned_cols=128 Identities=20% Similarity=0.202 Sum_probs=106.4
Q ss_pred ChhHHHHHHHcCcHHHHHHHHHhhcCCCCCccccCCCChHHHHHHHHhhhhhhccccccCccCCCCCCccccHHHHHHHh
Q 014994 135 VLPILVAAFHCQLNMLRSYCIQRIAGSNLDNFCLERELPDEVSSEIKSLRVKSNQESEANIAEVDPMHAKIVRRIHKALH 214 (415)
Q Consensus 135 g~t~L~~A~~~g~~~lv~~ll~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 214 (415)
..++|+.|+..|+.+.+..++.. +.+++.. ..++..+..|.||||+|+.
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~--g~~~~~~-----------------------------~~l~~~~~~g~t~Lh~A~~ 178 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD--GVDLTEK-----------------------------IPLANGHEPDETALHLAVR 178 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT--TCCTTSB-----------------------------CCCSSCSSTTCBHHHHHHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHh--hcchhhh-----------------------------ccccccccCCCCcchHHHH
Confidence 34677777777777777777765 3222110 1134456789999999999
Q ss_pred c---CCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 014994 215 S---DDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTL 287 (415)
Q Consensus 215 ~---g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~L 287 (415)
. |+.+++++|+++| ++ |..|+||||+|+..|+.+++++||+. |+|+|.+|..|+||||+|+..|+.+++++|
T Consensus 179 ~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~L 257 (278)
T 1dcq_A 179 SVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG-KASIEIANESGETPLDIAKRLKHEHCEELL 257 (278)
T ss_dssp HCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCCHHHHHHH
Confidence 9 8999999999999 54 57899999999999999999999995 999999999999999999999999999999
Q ss_pred HhCCCCC
Q 014994 288 LSKGARA 294 (415)
Q Consensus 288 l~~Gadi 294 (415)
+++|++.
T Consensus 258 l~~ga~~ 264 (278)
T 1dcq_A 258 TQALSGR 264 (278)
T ss_dssp HHHHTTC
T ss_pred HHcCCCC
Confidence 9999864
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=5e-20 Score=144.75 Aligned_cols=91 Identities=26% Similarity=0.209 Sum_probs=82.1
Q ss_pred CCCCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 014994 229 NVTLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGARASETTSDGQTAVAIC 308 (415)
Q Consensus 229 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh~A~~~~~~~~v~~Ll~~Gadin~~d~~g~tpL~~A 308 (415)
.++.+|.||||+|+..|+.+++++|+.. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 4577889999999999999999999986 899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcchHHHH
Q 014994 309 RRMTRRKDYIEA 320 (415)
Q Consensus 309 ~~~~~~~~v~~l 320 (415)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999888876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=7.1e-18 Score=132.32 Aligned_cols=89 Identities=18% Similarity=0.280 Sum_probs=80.0
Q ss_pred CCCCCccccHHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHCCCHHHHHHHHhcCCCCccccCCCCChHHH
Q 014994 198 VDPMHAKIVRRIHKALHSDDVELLKLLLDVS-NV---TLDDAYALHYAAACCSPKVFKEVLNMDSAGLNLKDARGRTVLH 273 (415)
Q Consensus 198 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~~gadvn~~d~~g~TpLh 273 (415)
....+.+|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+.. |++++.+|..|+||||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEA-GADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCcHHH
Confidence 4446678999999999999999999999999 54 57899999999999999999999986 9999999999999999
Q ss_pred HHHHcCCHHHHHHH
Q 014994 274 VAARRNEPEVMVTL 287 (415)
Q Consensus 274 ~A~~~~~~~~v~~L 287 (415)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999987
No 115
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.15 E-value=9e-11 Score=94.03 Aligned_cols=90 Identities=18% Similarity=0.296 Sum_probs=70.1
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccc-cccccCCCchhHHHHHHHHHHHhcccCCCCCCCc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLL-TDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEV 80 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~ 80 (415)
+.++++|++|++||+||+++|+||+++|.+...+ ....+.+ .++ .++.|..+++|+|+|++...
T Consensus 32 v~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~~~~-------~~~~f~~ll~~~Ytg~~~~~---- 96 (127)
T 1r29_A 32 VVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLDPEI-------NPEGFNILLDFMYTSRLNLR---- 96 (127)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECCTTS-------CHHHHHHHHHHHHHSCCCCC----
T ss_pred EEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeCCCC-------CHHHHHHHHHHHcCCCcCcC----
Confidence 4678999999999999999999999999876432 3345555 444 45599999999999987542
Q ss_pred ccccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 81 SACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 81 ~~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
.......|..|..++...+.+.+.+.
T Consensus 97 ----------------~~~~~~ll~~A~~~~i~~L~~~c~~~ 122 (127)
T 1r29_A 97 ----------------EGNIMAVMATAMYLQMEHVVDTCRKF 122 (127)
T ss_dssp ----------------TTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 13366788999999999988876553
No 116
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.14 E-value=9.9e-11 Score=92.58 Aligned_cols=88 Identities=19% Similarity=0.206 Sum_probs=69.5
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.+.++|++|++||+||+++|+||+++|.+.. ...+.+.+ +.++.|..+++|+|+|++...+
T Consensus 27 v~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~-------~~~~~f~~ll~~iYtg~~~~~~---- 88 (119)
T 3b84_A 27 ATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-------GGSVVLPA-------GFAEIFGLLLDFFYTGHLALTS---- 88 (119)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-------CCCEEECG-------GGHHHHHHHHHHHHHSCCCCCT----
T ss_pred eEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-------CCeEEeCC-------CCHHHHHHHHHHHcCCCCccCH----
Confidence 45789999999999999999999999998763 13444443 4455999999999999875421
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhC
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWL 123 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g 123 (415)
+.....|..|..++..++.+.+.+.-
T Consensus 89 ----------------~~v~~ll~~A~~~~i~~L~~~C~~~l 114 (119)
T 3b84_A 89 ----------------GNRDQVLLAARELRVPEAVELCQSFK 114 (119)
T ss_dssp ----------------TTHHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred ----------------HHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 23567899999999999998877653
No 117
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=90.76 Aligned_cols=90 Identities=12% Similarity=0.150 Sum_probs=65.8
Q ss_pred eeeeecc----cchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCC
Q 014994 2 LRLLLRA----NQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPP 77 (415)
Q Consensus 2 ~~~~~~~----~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~ 77 (415)
+.+++++ +.|++||+||+++|+||+++|.+...+ +...+.+.++. .+.|..+++|+|+|++...+
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e----~~~~i~l~~~~-------~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAE----VKSEIHIPDVE-------PAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC----------CCEEEETTSC-------HHHHHHHHHHHHHCCCCCCT
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCccc----CCCeEEeCCCC-------HHHHHHHHHHHcCCCccCCH
Confidence 4567887 899999999999999999999877443 22445554444 45999999999999875422
Q ss_pred CCcccccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 78 PEVSACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 78 ~~~~~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
+.....+..|..++...+.+.+.+.
T Consensus 80 --------------------~~~~~ll~~A~~~~~~~L~~~c~~~ 104 (109)
T 2vkp_A 80 --------------------DTVLATLYAAKKYIVPALAKACVNF 104 (109)
T ss_dssp --------------------TTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 2356788999999998888876543
No 118
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.12 E-value=1.7e-10 Score=97.57 Aligned_cols=123 Identities=18% Similarity=0.244 Sum_probs=90.7
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++|++||+||+++|+||+++|.+...++ ....+.+.++ .++.|..+++|+|+|++..
T Consensus 37 v~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~---~~~~i~l~~~-------~~~~f~~~l~~~Yt~~~~~------ 100 (172)
T 3htm_A 37 CCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEINDV-------EPEVFKEMMCFIYTGKAPN------ 100 (172)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG---GTTEEEECSS-------CHHHHHHHHHHHHHSCCTT------
T ss_pred eEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc---CCCeEEecCC-------CHHHHHHHHHHHhCCCCCC------
Confidence 46789999999999999999999999999764321 1134444444 4459999999999998743
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHh
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQR 157 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~ 157 (415)
........|..|..++..++.+.+.+.-..... ..+....+.+|..++..++.+.+++.
T Consensus 101 --------------~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~~~~~~A~~~~~~~L~~~~~~~ 159 (172)
T 3htm_A 101 --------------LDKMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILADLHSADQLKTQAVDF 159 (172)
T ss_dssp --------------GGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------cHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 123466789999999999888866654332212 24556778899999998877776664
No 119
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=95.39 Aligned_cols=93 Identities=18% Similarity=0.290 Sum_probs=69.3
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|+.|++||+||+++|+||+++|.+....+ ......+.+.++ .++.|..+|+|+|+|++...
T Consensus 50 v~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~-e~~~~~I~l~~v-------~~~~f~~lL~fiYtg~~~i~----- 116 (144)
T 2ppi_A 50 AHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD-DGSTYKIELEGI-------SVMVMREILDYIFSGQIRLN----- 116 (144)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------CCCEEECCSS-------CHHHHHHHHHHHTTSCCCCC-----
T ss_pred eEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccc-cCCCcEEEeCCC-------CHHHHHHHHHHHhCCCCCCC-----
Confidence 45789999999999999999999999998764320 012234555444 44599999999999987542
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
.+.....|..|..++...+.+.+.+.
T Consensus 117 ---------------~~~v~~ll~~A~~l~i~~L~~~C~~~ 142 (144)
T 2ppi_A 117 ---------------EDTIQDVVQAADLLLLTDLKTLCCEF 142 (144)
T ss_dssp ---------------TTTHHHHHHHHHHTTCHHHHHHHHTT
T ss_pred ---------------HHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 22367789999999999998877653
No 120
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.11 E-value=1.2e-10 Score=92.19 Aligned_cols=90 Identities=13% Similarity=0.258 Sum_probs=67.5
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.+.++|++|++||+||+++|+||+++|.+...++ ....+.+.++ ..+.|..+++|+|+|++...
T Consensus 28 v~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~---~~~~i~l~~~-------~~~~f~~ll~~~Yt~~~~~~----- 92 (120)
T 2if5_A 28 VVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD---QQNVYEIDFV-------SAEALTALMDFAYTATLTVS----- 92 (120)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHHC--------CCSEEECCSS-------CHHHHHHHHHHHHHSCCCCC-----
T ss_pred eEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc---CCceEEeCCC-------CHHHHHHHHHHHcCCCCccC-----
Confidence 45789999999999999999999999999764331 1234444443 44599999999999987542
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHH
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQH 121 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~ 121 (415)
.......+..|..++...+.+.+.+
T Consensus 93 ---------------~~~~~~ll~~A~~~~i~~L~~~C~~ 117 (120)
T 2if5_A 93 ---------------TANVGDILSAARLLEIPAVSHVCAD 117 (120)
T ss_dssp ---------------GGGHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2346778899999999999887765
No 121
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.10 E-value=1.9e-10 Score=90.58 Aligned_cols=89 Identities=18% Similarity=0.251 Sum_probs=68.2
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++|++||+||+++|+||+++|.+.. ...+.+. . ..+.++.|..+++|+|+|++...
T Consensus 25 v~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~----~-~~~~~~~f~~ll~~~Yt~~~~~~----- 87 (116)
T 2vpk_A 25 CTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-------ENNVFLD----Q-SQVKADGFQKLLEFIYTGTLNLD----- 87 (116)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-------CSCEECC----T-TTCCHHHHHHHHHHHHHSCCCCC-----
T ss_pred EEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-------CCeEEee----c-CCCCHHHHHHHHHHHcCCCcccC-----
Confidence 45789999999999999999999999998761 1233333 1 12455699999999999987542
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
.+.....+..|..++...+.+.+.+.
T Consensus 88 ---------------~~~v~~ll~~A~~~~i~~L~~~C~~~ 113 (116)
T 2vpk_A 88 ---------------SWNVKEIHQAADYLKVEEVVTKCKIK 113 (116)
T ss_dssp ---------------TTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 12366788999999999998877654
No 122
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.08 E-value=2.6e-10 Score=102.97 Aligned_cols=125 Identities=19% Similarity=0.285 Sum_probs=86.8
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++||+||+||+++|+||+++|.+....+ ......+.+.++ .++.|..+++|+|+|++...
T Consensus 34 v~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~-e~~~~~i~l~~v-------~~~~f~~ll~~~Yt~~~~i~----- 100 (256)
T 3hve_A 34 AHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD-DGSTYKIELEGI-------SVMVMREILDYIFSGQIRLN----- 100 (256)
T ss_dssp EEEEETTEEEEECHHHHHTTCHHHHHTC------------CEEECSSC-------CHHHHHHHHHHHHHSCCCCC-----
T ss_pred eEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcc-cCCCCeEEeCCC-------CHHHHHHHHhhccCCCCccc-----
Confidence 46789999999999999999999999998764310 012234444444 45599999999999988542
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHh
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQR 157 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~ 157 (415)
.+.....|..|..++..++++.+.+.-..... ..+....+.+|..++..++.+.+.+.
T Consensus 101 ---------------~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~---~~n~~~i~~~A~~~~~~~L~~~~~~~ 158 (256)
T 3hve_A 101 ---------------EDTIQDVVQAADLLLLTDLKTLCCEFLEGCIA---AENCIGIRDFALHYCLHHVHYLATEY 158 (256)
T ss_dssp ----------------CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCC---SSTTHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------------HhHHHHHHHHHHHHChHHHHHHHHHHHHhhCC---HhhHHHHHHHHHHcCcHHHHHHHHHH
Confidence 12367789999999999988866655433222 34567788899999987777666554
No 123
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.07 E-value=2.9e-10 Score=89.86 Aligned_cols=86 Identities=17% Similarity=0.279 Sum_probs=67.5
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++|++||+||+++|+||+++|.+.. ..+.+.+ +.++.+..+++|+|+|++...+
T Consensus 30 v~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~--------~~i~l~~-------~~~~~f~~ll~~~Ytg~~~i~~---- 90 (119)
T 2q81_A 30 CTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK--------DVVHLDI-------SNAAGLGQVLEFMYTAKLSLSP---- 90 (119)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHHHCC--------SGGGGGG-------CCHHHHHHHHHHHHHSCCCCCT----
T ss_pred eEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------CEEEeCC-------CCHHHHHHHHHHHcCCCCccCH----
Confidence 45789999999999999999999999998741 2333333 3456999999999999875421
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
+.....|..|..++..++.+.+.+.
T Consensus 91 ----------------~~~~~ll~~A~~l~i~~L~~~C~~~ 115 (119)
T 2q81_A 91 ----------------ENVDDVLAVATFLQMQDIITACHAL 115 (119)
T ss_dssp ----------------TTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2367789999999999998877653
No 124
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.07 E-value=1.9e-10 Score=93.08 Aligned_cols=89 Identities=19% Similarity=0.205 Sum_probs=68.9
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++|++||+||+++|+||+++|.+.. ...+.+.+ +.++.|..+|+|+|+|++...
T Consensus 28 v~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-------~~~i~l~~-------~~~~~f~~lL~fiYtg~~~i~----- 88 (135)
T 2yy9_A 28 ATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-------GGSVVLPA-------GFAEIFGLLLDFFYTGHLALT----- 88 (135)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHTCC-----------CCEEECG-------GGHHHHHHHHHHHHHSCCCCC-----
T ss_pred eEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-------CCeEEeCC-------CCHHHHHHHHHHHhCCCCCCC-----
Confidence 46789999999999999999999999998763 12444443 445599999999999987542
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCC
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLL 124 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~ 124 (415)
.+.....|..|..++...+++.+.+.-.
T Consensus 89 ---------------~~~v~~ll~~A~~l~i~~L~~~C~~~l~ 116 (135)
T 2yy9_A 89 ---------------SGNRDQVLLAAKELRVPEAVELCQSFQP 116 (135)
T ss_dssp ---------------TTTHHHHHHHHHHTTCHHHHHHHHHCCC
T ss_pred ---------------HHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 1236788999999999999998887643
No 125
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.06 E-value=2.1e-10 Score=91.01 Aligned_cols=86 Identities=21% Similarity=0.326 Sum_probs=67.5
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++|++||+||+++|+||+++|.+.. ..+.+.++ .++.|..+++|+|+|++...
T Consensus 31 v~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~--------~~i~l~~~-------~~~~f~~ll~~~Ytg~~~~~----- 90 (121)
T 1buo_A 31 VVIMVDSQEFHAHRTVLACTSKMFEILFHRNS--------QHYTLDFL-------SPKTFQQILEYAYTATLQAK----- 90 (121)
T ss_dssp EEEEESSCEEEECHHHHHHHCHHHHHHTTSCC--------SEEEECSS-------CHHHHHHHHHHHHHSCCCCC-----
T ss_pred EEEEECCEEEehhHHHHhhcCHHHHHHHcCCC--------cEEEeCCC-------CHHHHHHHHHhhcCCCcCCC-----
Confidence 46789999999999999999999999998641 24444444 45599999999999987542
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
.+.....+..|..++...+.+.+.+.
T Consensus 91 ---------------~~~~~~ll~~A~~~~i~~L~~~c~~~ 116 (121)
T 1buo_A 91 ---------------AEDLDDLLYAAEILEIEYLEEQCLKM 116 (121)
T ss_dssp ---------------GGGHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 23467889999999999888876543
No 126
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.04 E-value=2.5e-10 Score=92.79 Aligned_cols=92 Identities=15% Similarity=0.223 Sum_probs=70.4
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++|++||+||+++|+||+++|.+...+ . ..+.+. ..+.++.|..+|+|+|+|++...
T Consensus 39 v~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e----~-~~i~l~------~~v~~~~~~~lL~~~Ytg~~~i~----- 102 (138)
T 2z8h_A 39 VTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA----E-LTVTLP------EEVTVKGFEPLIQFAYTAKLILS----- 102 (138)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT----T-EEEECC------TTSCHHHHHHHHHHHHHSCCCCC-----
T ss_pred eEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC----C-ceEEeC------CCCCHHHHHHHHHHhcCCCcccC-----
Confidence 4678999999999999999999999999876432 1 233331 13556699999999999987542
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCC
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLL 124 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~ 124 (415)
.+.....|..|..++...+.+.+.+.-.
T Consensus 103 ---------------~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 130 (138)
T 2z8h_A 103 ---------------KDNVDEVCRCVEFLSVHNIEESCFQFLK 130 (138)
T ss_dssp ---------------TTTHHHHHHHHHHHTCGGGHHHHHHHTT
T ss_pred ---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 2236778999999999888888776643
No 127
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.01 E-value=2.2e-10 Score=93.96 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=69.8
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.+.++|++|++||+||+++|+||+++|.+...++ ....+.+.+ +..+.|..+++|+|+|++..
T Consensus 28 v~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~---~~~~i~l~~-------~~~~~~~~~l~~~Y~~~~~~------ 91 (145)
T 4eoz_A 28 CCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEIND-------VEPEVFKEMMCFIYTGKAPN------ 91 (145)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHH---HHTEEEECS-------SCHHHHHHHHHHHHHSCCTT------
T ss_pred eEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCC---CCceEEecC-------CCHHHHHHHHHhhccCccCC------
Confidence 46789999999999999999999999998763220 113444444 34559999999999998743
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHH
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNM 149 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~ 149 (415)
..+.....+..|..++..++.+.+.+.-..... ..+....+.+|..++..+
T Consensus 92 --------------~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~~~l~~A~~~~~~~ 142 (145)
T 4eoz_A 92 --------------LDKMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILADLHSADQ 142 (145)
T ss_dssp --------------GGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred --------------cHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHhCHHH
Confidence 123466789999999999998887766443322 234455566666665443
No 128
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.00 E-value=1.1e-09 Score=101.84 Aligned_cols=123 Identities=18% Similarity=0.254 Sum_probs=92.4
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.+.++|+.|++||+|||++||||+++|.+...++ ....+.+.++-|. .|..+|+|+|+|.+..
T Consensus 177 v~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~---~~~~i~l~~~~~~-------~f~~~L~~iYt~~~~~------ 240 (312)
T 3hqi_A 177 CCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEINDVEPE-------VFKEMMCFIYTGKAPN------ 240 (312)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHTTC--------CCSEEEECSSCHH-------HHHHHHHHHHHSCCTT------
T ss_pred eEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc---CCceEEecCCCHH-------HHHHHHHhhcCCCCCC------
Confidence 45788999999999999999999999998764331 2245666655555 9999999999987633
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHh
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQR 157 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~ 157 (415)
.......+|.+|-.++...+.+.+.+....-.. ..+..+.|.+|..++..++.+.+++.
T Consensus 241 --------------~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~---~~n~~~~l~~A~~~~~~~L~~~~~~~ 299 (312)
T 3hqi_A 241 --------------LDKMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILADLHSADQLKTQAVDF 299 (312)
T ss_dssp --------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC---TTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------hHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCC---HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 235577889999999999988877766543322 24556789999999998888777765
No 129
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.94 E-value=5.4e-10 Score=102.25 Aligned_cols=129 Identities=14% Similarity=0.183 Sum_probs=89.0
Q ss_pred eeeeec---ccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCC
Q 014994 2 LRLLLR---ANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPP 78 (415)
Q Consensus 2 ~~~~~~---~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~ 78 (415)
|.++++ |+.||+||+||+++|+||+++|.+...++ ....+.+.++... ..+..++|..+++|+|+|++...
T Consensus 35 v~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~---~~~~i~l~~~~~~-~~v~~~~f~~ll~~~Ytg~~~i~-- 108 (279)
T 3i3n_A 35 ITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES---RSGRVEMRKWSSE-PGPEPDTVEAVIEYMYTGRIRVS-- 108 (279)
T ss_dssp EEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------EEECCCCSST-TCSCHHHHHHHHHHHHHSEEEEE--
T ss_pred eEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc---cCCeEEecccccc-CCCCHHHHHHHHHhhCcCCcccC--
Confidence 456776 99999999999999999999998774331 2245566544332 25677799999999999987432
Q ss_pred CcccccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCCCcccccccCCChhHHHHHHHcCcHHHHHHHHHh
Q 014994 79 EVSACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWLLGMVGKALVEDVLPILVAAFHCQLNMLRSYCIQR 157 (415)
Q Consensus 79 ~~~~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~lv~~ll~~ 157 (415)
.+.+...|..|..++...+.+.+.+.-..... ..+....+.+|..++..++.+.+.+.
T Consensus 109 ------------------~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~---~~n~~~i~~~A~~~~~~~L~~~~~~~ 166 (279)
T 3i3n_A 109 ------------------TGSVHEVLELADRFLLIRLKEFCGEFLKKKLH---LSNCVAIHSLAHMYTLSQLALKAADM 166 (279)
T ss_dssp ------------------TTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCC---TTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------------------HHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCC---cchHHHHHHHHHHcCcHHHHHHHHHH
Confidence 23367789999999999988866655333222 24556778889888887776666554
No 130
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.94 E-value=1.3e-10 Score=92.56 Aligned_cols=87 Identities=16% Similarity=0.255 Sum_probs=62.4
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.+.++|++|++||+||+++|+||+++|.+...+ . ..+.+ +. .+.++.|..+|+|+|+|++...
T Consensus 32 v~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e----~-~~i~l----~~--~v~~~~f~~lL~~iYtg~~~i~----- 95 (124)
T 2ihc_A 32 VTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG----E-LNITL----PE--EVTVKGFEPLIQFAYTAKLILS----- 95 (124)
T ss_dssp EEEEETTEEEEECHHHHHHHBHHHHHHHTTC-------C-EEEEC----CT--TSCHHHHHHHHHHHHHSEEEEE-----
T ss_pred EEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC----C-ceEee----cC--CcCHHHHHHHHHHhcCCCcccC-----
Confidence 4678999999999999999999999999876432 1 23333 11 3556699999999999987432
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHH
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLL 119 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~L 119 (415)
.+.....|..|..++...+.+.+
T Consensus 96 ---------------~~~v~~ll~~A~~~~~~~L~~~C 118 (124)
T 2ihc_A 96 ---------------KENVDEVCKCVEFLSVHNIEESC 118 (124)
T ss_dssp ---------------TTTHHHHHHHHHHHTBSSCCGGG
T ss_pred ---------------HHHHHHHHHHHHHHCCHHHHHHH
Confidence 22356778888888776655443
No 131
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=98.92 E-value=1.2e-09 Score=85.72 Aligned_cols=81 Identities=20% Similarity=0.340 Sum_probs=61.0
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.+.++|++|++||+||+++|+||+++|.+.. ..+.+.++ ..+.|..+++|+|+|++..
T Consensus 34 v~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~~--------~~i~l~~~-------~~~~f~~~l~~~Ytg~~~~------ 92 (116)
T 3fkc_A 34 VTVIVEDRKFRAHKNILSASSTYFHQLFSVAG--------QVVELSFI-------RAEIFAEILNYIYSSKIVR------ 92 (116)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHTTSCC--------SEEEECSS-------CHHHHHHHHHHHTTSCCCS------
T ss_pred EEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------CEEEeCCC-------CHHHHHHHHHhhcCCCcCC------
Confidence 45778999999999999999999999998751 24444444 4459999999999998721
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHH
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRV 116 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v 116 (415)
...+.....|..|..++...+.
T Consensus 93 -------------~~~~~~~~ll~~A~~l~i~~L~ 114 (116)
T 3fkc_A 93 -------------VRSDLLDELIKSGQLLGVKFIA 114 (116)
T ss_dssp -------------CCHHHHHHHHHHHHHHTCHHHH
T ss_pred -------------CCHHHHHHHHHHHHHhCccccC
Confidence 1233456778888888776654
No 132
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.91 E-value=2.8e-10 Score=90.81 Aligned_cols=84 Identities=18% Similarity=0.297 Sum_probs=60.8
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.++++|++|++||+||+++|+||+++|.+...+ ...+.+.+ .+.++.|..+++|+|+|++...+
T Consensus 35 v~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~------~~~~~~f~~~l~~iYtg~~~~~~---- 99 (125)
T 3ohu_A 35 VTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-----DLVVSLPE------EVTARGFGPLLQFAYTAKLLLSR---- 99 (125)
T ss_dssp EEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-----SCEEECCT------TCCHHHHHHHHHHHTTSEEEECT----
T ss_pred eEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-----CcEEEeCC------CCCHHHHHHHHHhHcCCceEECH----
Confidence 4678999999999999999999999999876332 23333333 24556999999999999874421
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHH
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRV 116 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v 116 (415)
+.....|..|..++...+.
T Consensus 100 ----------------~~v~~ll~~A~~l~i~~L~ 118 (125)
T 3ohu_A 100 ----------------ENIREVIRCAEFLRMHNLE 118 (125)
T ss_dssp ----------------TTHHHHHHHHHHHTBSSCT
T ss_pred ----------------HHHHHHHHHHHHhCCHHHH
Confidence 2355667777776655443
No 133
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.90 E-value=3.8e-10 Score=90.58 Aligned_cols=86 Identities=21% Similarity=0.315 Sum_probs=63.2
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
+.+.++|++|++||+||+++|+||+++|.+. ....+.+. . .+.++.|..+++|+|+|++...+
T Consensus 36 v~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~----~--~~~~~~f~~ll~~iYtg~~~i~~---- 98 (129)
T 3ga1_A 36 VSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELP----A--AVQPQSFQQILSFCYTGRLSMNV---- 98 (129)
T ss_dssp EEEEETTEEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECC----T--TCCHHHHHHHHHHHHHSEEECCT----
T ss_pred eEEEECCEEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEEC----C--CCCHHHHHHHHHHHhCCccccCH----
Confidence 4578899999999999999999999999886 11344442 1 24455999999999999875422
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHH
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQ 120 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll 120 (415)
+.....|..|..++...+++.+.
T Consensus 99 ----------------~~~~~ll~~A~~~~i~~l~~~C~ 121 (129)
T 3ga1_A 99 ----------------GDQDLLMYTAGFLQIQEIMEKGT 121 (129)
T ss_dssp ----------------TTHHHHHHHHHHTTBTTSSCC--
T ss_pred ----------------HHHHHHHHHHHHhCCHHHHHHHH
Confidence 23566788888888776665443
No 134
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=98.82 E-value=2.1e-09 Score=84.75 Aligned_cols=83 Identities=11% Similarity=0.051 Sum_probs=64.6
Q ss_pred eeeeecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc
Q 014994 2 LRLLLRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS 81 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~ 81 (415)
|.++++|++|++||+|||++|+||++ ....+.+.+ +.++.|..+++|+|||++..
T Consensus 33 v~l~v~~~~f~aHk~vLaa~S~yF~~------------~~~~i~l~~-------v~~~~f~~ll~fiYtg~~~i------ 87 (119)
T 3m5b_A 33 TLITVGSQEFPAHSLVLAGVSQQLGR------------RGQWALGEG-------ISPSTFAQLLNFVYGESVEL------ 87 (119)
T ss_dssp EEEEETTEEEEECHHHHHTTCGGGCC------------CEEEECCSS-------CCHHHHHHHHHHHTTCCEEE------
T ss_pred eEEEECCEEEeeEHHHHHHcCHHHhc------------CCCEEEeCC-------CCHHHHHHHHHHHcCCCcCc------
Confidence 45789999999999999999999984 112333333 45569999999999998743
Q ss_pred cccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhC
Q 014994 82 ACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHWL 123 (415)
Q Consensus 82 ~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g 123 (415)
..+.....|..|..++...+++.+.+..
T Consensus 88 --------------~~~~v~~ll~aA~~l~i~~l~~~C~~~~ 115 (119)
T 3m5b_A 88 --------------QPGELRPLQEAARALGVQSLEEACWRAR 115 (119)
T ss_dssp --------------CGGGHHHHHHHHHHTTCHHHHHHHHHHC
T ss_pred --------------CHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 2334677899999999999999887753
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=97.19 E-value=0.00074 Score=55.54 Aligned_cols=111 Identities=15% Similarity=0.160 Sum_probs=66.7
Q ss_pred eeee-ecccchhhHHHHHhhccHHHHHHHccC-CC-CCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCC
Q 014994 2 LRLL-LRANQWRLIAAYCLSAVKFFRRLLNLR-ND-GSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPP 78 (415)
Q Consensus 2 ~~~~-~~~~~~~~h~aila~~s~~f~~~f~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~ 78 (415)
+.|+ -||..|++|+++ |..|++|+.||.+. .. .+ .... +|. ..|....+..++.|+|+++-.+.+.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~---~~~~------Ipl-~~V~~~iL~kViey~~~h~~~~~~~ 71 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEG---DDDP------VPL-PNVNAAILKKVIQWCTHHKDDPPPP 71 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS---------C------EEC-TTSCHHHHHHHHHHHHHTTTCCC--
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccc---cCCC------cCC-CCccHHHHHHHHHHHHHcCcCCCCc
Confidence 4565 489999999999 89999999999873 11 10 1122 333 3455669999999999987544322
Q ss_pred Cccccc----CCCC-CC-cCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhC
Q 014994 79 EVSACV----DDAC-VH-VSCPSSVNYVIELMYASAALQMKDRVFLLQHWL 123 (415)
Q Consensus 79 ~~~~~~----~~~c-~~-~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g 123 (415)
...... ..-+ |. .........+..+|..|-..+...++.++.+.-
T Consensus 72 ~~~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~v 122 (159)
T 2ast_A 72 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122 (159)
T ss_dssp ---------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ccccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 211000 0000 00 001223455778888888888888888776653
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=96.56 E-value=0.0011 Score=49.53 Aligned_cols=57 Identities=7% Similarity=0.092 Sum_probs=39.2
Q ss_pred eee-ecccchhhHHHHHhhccHHHHHHHccCCCCCCCCC-CccccccccccCCCchhHHHHHHHHHHHh
Q 014994 3 RLL-LRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEG-KPKYLLTDLVPCDGKFGFEAFNDILHYIY 69 (415)
Q Consensus 3 ~~~-~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~L~~ly 69 (415)
+|+ -||.+|++|+.+ |..|++|++||.+.... .+. ...+.+. .|....+..++.|+|
T Consensus 5 ~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~--~E~~~~~I~l~-------~V~~~iL~kViey~~ 63 (97)
T 4ajy_C 5 KLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQF--AENETNEVNFR-------EIPSHVLSKVCMYFT 63 (97)
T ss_dssp EEECTTCCEEEEEHHH-HTTSHHHHHHHCCC----------CEEECT-------TSCHHHHHHHHHHHH
T ss_pred EEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCc--cccCCCceECC-------CCCHHHHHHHHHHHH
Confidence 444 378999999999 99999999999864211 111 1233333 355559999999999
No 137
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=94.89 E-value=0.0051 Score=50.49 Aligned_cols=110 Identities=13% Similarity=0.044 Sum_probs=41.2
Q ss_pred eeeee-cccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCc
Q 014994 2 LRLLL-RANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEV 80 (415)
Q Consensus 2 ~~~~~-~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~ 80 (415)
++|.- ||..|++|+++ |..|++|+.||...... . .+|. ..|....+..++.|+|..+-.+.+...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~~------~------~Ipl-~~V~~~iL~kVieyc~~h~~~~~~~~~ 71 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCVD------N------GVPL-PNVTSKILAKVIEYCKRHVEAAASKAE 71 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------------CC-TTSCHHHHHHHHHC-------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCCC------C------ceeC-CcCcHHHHHHHHHHHHHcccCCCcccc
Confidence 45664 89999999998 88999999999765211 1 2454 456677999999999997654321110
Q ss_pred cc-c----cCCCC-CC-cCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCCC
Q 014994 81 SA-C----VDDAC-VH-VSCPSSVNYVIELMYASAALQMKDRVFLLQHWLLG 125 (415)
Q Consensus 81 ~~-~----~~~~c-~~-~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~ 125 (415)
.. . ..... |. .........+..+|..|-..+...++.+..+.-++
T Consensus 72 ~~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~ 123 (160)
T 2p1m_A 72 AVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVAD 123 (160)
T ss_dssp -----------------------------CHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 00 0 00000 10 00112233456677778888888888777665443
No 138
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=94.07 E-value=0.091 Score=41.89 Aligned_cols=108 Identities=15% Similarity=0.144 Sum_probs=64.9
Q ss_pred eeeee-cccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCc
Q 014994 2 LRLLL-RANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEV 80 (415)
Q Consensus 2 ~~~~~-~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~ 80 (415)
++|.- ||..|.+|+++ |..|.+|+.||.... . .. +|. ..|....+..++.|+|..+-.+.+...
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-~------~~------Ipl-~~V~~~iL~kVieyc~~h~~~~~~~~~ 68 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-M------DP------VPL-PNVNAAILKKVIQWCTHHKDDPPPPED 68 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-C------SS------EEC-TTCCHHHHHHHHHHHHHHTTCC-----
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-C------Cc------eec-CCcCHHHHHHHHHHHHHhccCCCcccc
Confidence 45555 88999999998 899999999998742 1 12 444 346667999999999997644322211
Q ss_pred cccc----CCCC-CCc-CCCchhhhhHHHHHHHHHcCcHHHHHHHHHhCC
Q 014994 81 SACV----DDAC-VHV-SCPSSVNYVIELMYASAALQMKDRVFLLQHWLL 124 (415)
Q Consensus 81 ~~~~----~~~c-~~~-~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~ 124 (415)
..+. ..-. |.. ........+.+++..|-..+...++.+..+.-+
T Consensus 69 ~~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA 118 (141)
T 1fs1_B 69 DENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 118 (141)
T ss_dssp ------------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0000 0000 000 012233456677777777788777776665543
No 139
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=89.44 E-value=0.68 Score=34.73 Aligned_cols=94 Identities=18% Similarity=0.195 Sum_probs=61.5
Q ss_pred eeeeecccchhhHHHHHhhcc-HHHHHHHccCCCC-CCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCC
Q 014994 2 LRLLLRANQWRLIAAYCLSAV-KFFRRLLNLRNDG-SVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPE 79 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s-~~f~~~f~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~ 79 (415)
|+|-|+|..|...+..|+... .+|..||.+...- ...... ...+-+--|. .|..+|.|+.+|++..++ .
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~-~~~fiDRdp~-------~F~~IL~~lr~g~l~~p~-~ 78 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDET-GAYLIDRDPT-------YFGPVLNYLRHGKLVINK-D 78 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTT-SCEEECSCHH-------HHHHHHHHHHHSCCCCCT-T
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCC-ceEEecCChH-------HHHHHHHHhCCCeeCCCC-C
Confidence 678899999999999998665 4678887643110 001111 1122233455 999999999999874421 1
Q ss_pred cccccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 80 VSACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 80 ~~~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
.| ....+.-|..+|..++++.|.+.
T Consensus 79 -------~~-----------~~~l~~Ea~fy~l~~L~~~l~~~ 103 (107)
T 3drz_A 79 -------LA-----------EEGVLEEAEFYNITSLIKLVKDK 103 (107)
T ss_dssp -------SC-----------HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred -------CC-----------HHHHHHHHHHCCCHHHHHHHHHH
Confidence 11 23457788889999999987653
No 140
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=85.38 E-value=0.71 Score=34.11 Aligned_cols=59 Identities=8% Similarity=0.166 Sum_probs=42.4
Q ss_pred eeeee-cccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhccc
Q 014994 2 LRLLL-RANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGK 72 (415)
Q Consensus 2 ~~~~~-~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~ 72 (415)
++|.- ||..|.+++.+ |..|..++.|+..+. . +.... +|. ..|....+..++.|++..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e---~~~~~------Ipl-p~V~~~iL~kVieyc~~h~ 65 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R---ESKGR------IEL-KQFDSHILEKAVEYLNYNL 65 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T---TCTTE------EEE-TTSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c---cCCCc------eec-CCcCHHHHHHHHHHHHHhc
Confidence 45665 89999999997 889999999998732 1 01122 344 3456669999999998753
No 141
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=83.58 E-value=0.73 Score=33.79 Aligned_cols=62 Identities=10% Similarity=0.099 Sum_probs=41.7
Q ss_pred eeeee-cccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhccc
Q 014994 2 LRLLL-RANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGK 72 (415)
Q Consensus 2 ~~~~~-~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~ 72 (415)
++|.- ||..|.+++.+ |..|..++.|+...... .+.. .+.+|. ..|....+..++.|++..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~--~e~~-----~~~Ipl-~~V~~~iL~kVieyc~~h~ 65 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQF--AENE-----TNEVNF-REIPSHVLSKVCMYFTYKV 65 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------------CEEEC-SSCCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCc--cccc-----CCceeC-CCCCHHHHHHHHHHHHHcc
Confidence 45664 89999999997 88999999999864210 0111 012444 3566669999999998743
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=64.85 E-value=21 Score=28.90 Aligned_cols=111 Identities=10% Similarity=0.035 Sum_probs=60.0
Q ss_pred ecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCCcc--cc
Q 014994 6 LRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPEVS--AC 83 (415)
Q Consensus 6 ~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~~~--~~ 83 (415)
-||..|.+.+.+ |..|..++.|+...... ..+.. -...+|. ..|....+..++.|++..+-.+.|.... ..
T Consensus 14 sDG~~F~V~~~v-A~~S~tIk~ml~~~~~~-~~~~~----~~~~Ipl-pnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 14 GEGERFTVDKKI-AERSLLLKNYLNDMGDD-DDEDD----DEIVMPV-PNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp TTCCEEEEEHHH-HTTSHHHHHHHHC----------------CEEEC-TTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred CCCCEEEecHHH-HHHhHHHHHHHHhcCcc-ccccc----CCCceee-CCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 578889999997 77899999999754221 00000 0112344 3466669999999999865544332100 00
Q ss_pred c-CCCC-CC-cCCCchhhhhHHHHHHHHHcCcHHHHHHHHHhC
Q 014994 84 V-DDAC-VH-VSCPSSVNYVIELMYASAALQMKDRVFLLQHWL 123 (415)
Q Consensus 84 ~-~~~c-~~-~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g 123 (415)
. ..-. |. .........+..++..|-+.+...++.+..+.-
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~v 129 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVV 129 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 0 0000 00 000122344567777777777777777665543
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=59.80 E-value=9.9 Score=31.84 Aligned_cols=94 Identities=18% Similarity=0.195 Sum_probs=60.5
Q ss_pred eeeeecccchhhHHHHHhhcc-HHHHHHHccCCCC-CCCCCCccccccccccCCCchhHHHHHHHHHHHhcccCCCCCCC
Q 014994 2 LRLLLRANQWRLIAAYCLSAV-KFFRRLLNLRNDG-SVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGKLKAPPPE 79 (415)
Q Consensus 2 ~~~~~~~~~~~~h~aila~~s-~~f~~~f~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~~~~~~~~ 79 (415)
|+|-|+|..|-..+..|.... .+|..+|.+...- ...... ...+-+--|. .|..+|.|+-+|++..+ ..
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~-geyFIDRDP~-------~F~~ILnyLRtG~L~lP-~~ 84 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDET-GAYLIDRDPT-------YFGPVLNYLRHGKLVIN-KD 84 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTT-CCEEECSCST-------THHHHHHHHHHSCCCCC-TT
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCC-ccEEecCChH-------HHHHHHHHhcCCccCCC-CC
Confidence 677899999988888887543 3677777654211 001111 2223344566 89999999999987542 11
Q ss_pred cccccCCCCCCcCCCchhhhhHHHHHHHHHcCcHHHHHHHHHh
Q 014994 80 VSACVDDACVHVSCPSSVNYVIELMYASAALQMKDRVFLLQHW 122 (415)
Q Consensus 80 ~~~~~~~~c~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ 122 (415)
.| ....+.-|..+|..++++.|.+.
T Consensus 85 -------~~-----------~~~l~eEA~FygL~~Lv~~l~~~ 109 (202)
T 3drx_A 85 -------LA-----------EEGVLEEAEFYNITSLIKLVKDK 109 (202)
T ss_dssp -------SC-----------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -------CC-----------HHHHHHHHHHCCcHHHHHHHHHH
Confidence 11 23457788889999999887654
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=45.33 E-value=12 Score=28.03 Aligned_cols=62 Identities=10% Similarity=0.104 Sum_probs=40.8
Q ss_pred eeee-ecccchhhHHHHHhhccHHHHHHHccCCCCCCCCCCccccccccccCCCchhHHHHHHHHHHHhccc
Q 014994 2 LRLL-LRANQWRLIAAYCLSAVKFFRRLLNLRNDGSVSEGKPKYLLTDLVPCDGKFGFEAFNDILHYIYTGK 72 (415)
Q Consensus 2 ~~~~-~~~~~~~~h~aila~~s~~f~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ly~g~ 72 (415)
++|+ -||..|.+.+. +|..|..++.|+...... .+.. ...+|. -.|....+..++.|++..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~--~e~~-----~~~Ipl-pnV~s~iL~kVieyc~~h~ 81 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQF--AENE-----TNEVNF-REIPSHVLSKVCMYFTYKV 81 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC---------------CEEEC-SSCCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCc--cccc-----CCceeC-CCCCHHHHHHHHHHHHHhh
Confidence 4555 68899999999 578999999999754210 0110 012444 3566669999999998743
No 145
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=33.49 E-value=33 Score=19.97 Aligned_cols=18 Identities=28% Similarity=0.337 Sum_probs=14.4
Q ss_pred HHHHHHhcCCHHHHHHHH
Q 014994 208 RIHKALHSDDVELLKLLL 225 (415)
Q Consensus 208 ~L~~A~~~g~~~~v~~Ll 225 (415)
-+..||..|+.+.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 357788999999998874
No 146
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=21.84 E-value=1.7e+02 Score=27.27 Aligned_cols=53 Identities=4% Similarity=-0.097 Sum_probs=41.9
Q ss_pred HHHHcCcHHHHHHHHHhCCCcccccc------------cCCChhHHHHHHHcCcHHHHHHHHHhh
Q 014994 106 ASAALQMKDRVFLLQHWLLGMVGKAL------------VEDVLPILVAAFHCQLNMLRSYCIQRI 158 (415)
Q Consensus 106 ~A~~~g~~~~v~~Ll~~g~~~~~~~~------------~~~g~t~L~~A~~~g~~~lv~~ll~~~ 158 (415)
..+.-|+...|+..+..|.+++-+.. -.-|.|.+|+|+++.+.+++..|+...
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 45567899999988888877654321 246899999999999999999999753
Done!