Query 014995
Match_columns 415
No_of_seqs 300 out of 1616
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:48:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014995.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014995hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.1E-49 3.9E-54 406.1 25.1 281 115-412 6-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 6.8E-46 2.3E-50 377.0 24.2 280 117-415 9-395 (403)
3 3psg_A Pepsinogen; hydrolase(a 100.0 2.3E-44 7.9E-49 362.0 27.3 252 123-413 49-370 (370)
4 3c9x_A Trichoderma reesei aspa 100.0 2E-43 6.8E-48 349.6 25.7 250 128-412 13-329 (329)
5 1tzs_A Cathepsin E; hydrolase, 100.0 1.6E-43 5.4E-48 353.3 25.0 250 126-415 19-344 (351)
6 1dpj_A Proteinase A; proteinas 100.0 2.6E-43 8.8E-48 348.5 24.6 252 119-413 4-329 (329)
7 3cms_A Chymosin B; hydrolase, 100.0 1.1E-43 3.6E-48 350.6 21.1 250 119-413 5-323 (323)
8 1oew_A Endothiapepsin; hydrola 100.0 3.5E-43 1.2E-47 347.8 24.3 246 128-412 13-329 (329)
9 1j71_A Candidapepsin, aspartic 100.0 2.6E-43 8.8E-48 349.3 22.5 248 118-415 3-326 (334)
10 1t6e_X Xylanase inhibitor; two 100.0 3.1E-43 1.1E-47 354.9 23.4 268 118-413 3-373 (381)
11 1am5_A Pepsin, acid proteinase 100.0 7.6E-43 2.6E-47 344.5 25.5 250 120-413 4-324 (324)
12 2apr_A Rhizopuspepsin; hydrola 100.0 3.2E-43 1.1E-47 347.5 22.6 244 129-413 14-324 (325)
13 2x0b_A Renin; hydrolase-hormon 100.0 3.2E-43 1.1E-47 355.1 22.7 251 120-413 53-383 (383)
14 1mpp_A Pepsin; hydrolase(acid 100.0 5.8E-43 2E-47 350.3 22.9 255 118-415 8-357 (361)
15 4aa9_A Chymosin; hydrolase, as 100.0 3.9E-43 1.3E-47 345.6 21.3 246 125-413 6-320 (320)
16 2qzx_A Candidapepsin-5; aspart 100.0 5.3E-43 1.8E-47 348.1 22.2 251 118-415 3-333 (342)
17 3fv3_A SAPP1P-secreted asparti 100.0 1.3E-42 4.6E-47 344.5 24.2 252 118-415 3-331 (339)
18 1htr_B Gastricsin; aspartyl pr 100.0 6.2E-43 2.1E-47 345.8 21.2 245 128-413 10-329 (329)
19 1miq_A Plasmepsin; aspartic pr 100.0 7.8E-42 2.7E-46 344.2 23.4 251 119-413 53-374 (375)
20 3k1w_A Renin; protease, altern 100.0 3.2E-42 1.1E-46 341.9 19.9 254 117-413 7-340 (341)
21 3pvk_A Candidapepsin-2; hydrol 100.0 6.9E-42 2.4E-46 339.6 22.3 243 129-415 11-333 (342)
22 2bju_A Plasmepsin II; aspartic 100.0 1.1E-41 3.9E-46 350.2 21.8 257 118-413 128-450 (453)
23 1qdm_A Prophytepsin; aspartic 100.0 3.5E-41 1.2E-45 349.3 24.0 257 125-413 47-478 (478)
24 1yg9_A Aspartic protease BLA G 100.0 2.3E-41 7.8E-46 335.0 20.8 245 128-413 15-329 (330)
25 2ewy_A Beta-secretase 2; BACE2 100.0 8E-41 2.7E-45 337.1 23.5 253 129-415 12-357 (383)
26 1izd_A Aspartic proteinase; su 100.0 1.1E-40 3.7E-45 329.2 22.6 246 129-413 14-323 (323)
27 2qp8_A Beta-secretase 1; BACE1 100.0 2.4E-40 8.3E-45 335.2 24.9 252 129-415 20-369 (395)
28 1ibq_A Aspergillopepsin; aspar 100.0 2.4E-40 8.2E-45 326.9 24.2 246 129-413 13-325 (325)
29 1bxo_A Protein (penicillopepsi 100.0 1.3E-40 4.5E-45 328.5 20.4 246 129-413 14-323 (323)
30 3lpj_A Beta-secretase 1; alzhe 100.0 3.4E-40 1.2E-44 340.2 23.9 255 129-415 73-422 (455)
31 3qvc_A Histo-aspartic protease 100.0 5.8E-40 2E-44 337.6 24.7 255 119-413 128-449 (451)
32 3vf3_A Beta-secretase 1; struc 100.0 1E-39 3.6E-44 331.2 24.9 255 129-415 27-376 (402)
33 1wkr_A Polyporopepsin; hydrola 100.0 3.8E-39 1.3E-43 320.0 21.8 245 119-415 4-335 (340)
34 1b5f_A Protein (cardosin A); h 100.0 1.2E-28 4E-33 233.2 13.5 151 119-302 4-170 (239)
35 1lya_B Cathepsin D; lysosomal 99.9 2.5E-22 8.7E-27 189.4 17.4 163 241-413 5-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 3.8E-23 1.3E-27 168.5 8.8 88 120-234 5-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 5.3E-16 1.8E-20 123.5 8.2 80 333-413 3-87 (87)
38 1fmb_A EIAV protease; hydrolas 83.2 1.1 3.7E-05 36.0 4.0 26 132-159 9-34 (104)
39 2hs1_A HIV-1 protease; ultra-h 82.7 1.1 3.9E-05 35.6 3.8 27 133-161 10-36 (99)
40 3ec0_A Protease; HIV-2, inhibi 77.9 2 6.9E-05 34.1 3.8 27 133-161 10-36 (99)
41 3liy_A Protease; hydrolase, hy 76.0 2.4 8.3E-05 34.5 3.8 31 133-163 12-45 (116)
42 2hah_A Protease, retropepsin; 73.0 3 0.0001 34.1 3.8 25 133-160 16-40 (116)
43 2i1a_A DNA damage-inducible pr 68.9 3.8 0.00013 34.3 3.7 28 130-159 25-52 (148)
44 3sqf_A Protease; folded monome 66.8 5.5 0.00019 32.4 4.0 28 133-162 11-38 (114)
45 3s8i_A Protein DDI1 homolog 1; 57.4 8.2 0.00028 32.6 3.7 30 130-161 23-52 (148)
46 2rsp_A RSV protease; hydrolase 51.4 11 0.00039 31.0 3.4 23 138-162 27-49 (124)
47 3slz_A GAG-Pro-POL polyprotein 50.0 14 0.00048 30.7 3.8 29 131-161 22-50 (132)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 48.9 14 0.00047 33.1 3.8 26 132-159 9-34 (203)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 30.0 42 0.0014 29.9 3.8 27 132-160 113-139 (203)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.1e-49 Score=406.14 Aligned_cols=281 Identities=21% Similarity=0.411 Sum_probs=225.7
Q ss_pred CcceeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccc
Q 014995 115 TEAFTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRI 194 (415)
Q Consensus 115 ~~~~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~ 194 (415)
..++.+|+.... .+++|+++|.||||||++.|+|||||+++||||.+| .+|+||+.++|.++.|..
T Consensus 6 ~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~ 71 (413)
T 3vla_A 6 PSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSL 71 (413)
T ss_dssp CSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHH
T ss_pred CccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccc
Confidence 346778988663 349999999999999999999999999999999976 479999999999999997
Q ss_pred cccCC-------CCCCCCCCCCceeEec-CCCCeEeEEEEEEEEEecccCCC-----ceeeecCeEEEEEEcC--CCCCC
Q 014995 195 LRESF-------PFGNCNSKECPFNIQY-ADGSGSGGFWATDRITIQEANSN-----GYFTRYPFLLGCINNS--SGDKS 259 (415)
Q Consensus 195 ~~~~~-------~~~~C~~~~c~y~i~Y-gdgs~~~G~l~~Dtltl~~~~~~-----~~v~~~~~~FGc~~~~--~g~f~ 259 (415)
...+. ..++|.++.|.|.+.| +|++.+.|++++|+|+|+..++. ..++ ++.|||++.+ .+.+.
T Consensus 72 ~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~--~~~FGc~~~~~~~g~~~ 149 (413)
T 3vla_A 72 SGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVP--RFIFSCAPTSLLQNLAS 149 (413)
T ss_dssp TTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEE--EEEEEEECGGGGTTSCT
T ss_pred cccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeC--CEEEECcccccccCccc
Confidence 65321 0125666779999999 58888999999999999854332 1355 9999999986 45667
Q ss_pred CCCcccccCCCCceeecccccc-----eEEEEcCCCCCCceEEEECC---------------------------------
Q 014995 260 GASGIMGLDRSPVSIITRTNTS-----YFSYCLPSPYGSTGYITFGK--------------------------------- 301 (415)
Q Consensus 260 ~~~GIlGLG~~~~Sl~sQl~~~-----~FSycL~~~~~~~G~L~fG~--------------------------------- 301 (415)
..+||||||++++|+++|+..+ .|||||++....+|.|+||+
T Consensus 150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~ 229 (413)
T 3vla_A 150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST 229 (413)
T ss_dssp TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence 8999999999999999999763 39999998555678888883
Q ss_pred -----C-------------------------------------cCh---------hhHHHHHHHHHh--hccccCCCCCC
Q 014995 302 -----T-------------------------------------DTV---------NTLRSAFHKRMK--KYKKAKGLEDL 328 (415)
Q Consensus 302 -----t-------------------------------------GTv---------~~l~~af~~~~~--~~~~~~~~~~~ 328 (415)
+ ||. .+|+++|.+++. +++++.+. ..
T Consensus 230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~-~~ 308 (413)
T 3vla_A 230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASV-AP 308 (413)
T ss_dssp TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCC-TT
T ss_pred ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCC-CC
Confidence 1 121 456666776665 34444443 56
Q ss_pred CcceeeccCCcc----cccceEEEEEcC-CeEEEecCCCeEEEeCCCeEEEEEEecCCC-CCceeechhhhcceEEEEEC
Q 014995 329 LDTCYDLSAYET----VVVPKIAIHFLG-GVDLELDVRGTLVVASVSQVCLGFATYPPD-PNSITLGNVQQRGHEVHYDV 402 (415)
Q Consensus 329 ~d~Cy~~~~~~~----~~~P~i~f~F~g-Ga~~~l~~~~~l~~~~~~~~Cla~~~~~~~-~~~~IlG~~~~~~~~vvfD~ 402 (415)
++.||+.++... ..+|+|+|+|+| +++|+|++++|+++.+.+..|++|+..... ...||||++|||++|+|||+
T Consensus 309 ~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~ 388 (413)
T 3vla_A 309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDL 388 (413)
T ss_dssp CSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEET
T ss_pred CcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEEC
Confidence 789999886532 579999999976 489999999999987667889999876432 35799999999999999999
Q ss_pred CCCEEEEeeC
Q 014995 403 AGRRLGFGPG 412 (415)
Q Consensus 403 ~~~~iGFa~~ 412 (415)
+++|||||+.
T Consensus 389 ~~~riGfa~~ 398 (413)
T 3vla_A 389 ATSRVGFSGT 398 (413)
T ss_dssp TTTEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=6.8e-46 Score=377.03 Aligned_cols=280 Identities=21% Similarity=0.350 Sum_probs=214.6
Q ss_pred ceeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccc
Q 014995 117 AFTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILR 196 (415)
Q Consensus 117 ~~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~ 196 (415)
.+.+|+... ..+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.++|.++.|....
T Consensus 9 ~~~~pl~~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~ 74 (403)
T 3aup_A 9 LVVLPVQND-GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRAN 74 (403)
T ss_dssp CEEEEEEEC-TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTT
T ss_pred cEEEeeecC-CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCcc
Confidence 456777642 3348999999999999999999999999999999875 47999999999999998765
Q ss_pred cC------C-CCCCCCCCCCceeEecC-CCCeEeEEEEEEEEEecccCCC-------ceeeecCeEEEEEEcCC---CCC
Q 014995 197 ES------F-PFGNCNSKECPFNIQYA-DGSGSGGFWATDRITIQEANSN-------GYFTRYPFLLGCINNSS---GDK 258 (415)
Q Consensus 197 ~~------~-~~~~C~~~~c~y~i~Yg-dgs~~~G~l~~Dtltl~~~~~~-------~~v~~~~~~FGc~~~~~---g~f 258 (415)
.+ . ..+.|.++.|.|.+.|+ |++.+.|.+++|+|+|++.++. ..++ ++.|||++... +.+
T Consensus 75 ~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~--~~~Fg~~~~~~~~~~~~ 152 (403)
T 3aup_A 75 THQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVP--QFLFSCAPSFLVQKGLP 152 (403)
T ss_dssp CCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEE--EEEEEEECGGGGSSSSS
T ss_pred ccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCcccccccccccc--CEEEECCcccccccCCC
Confidence 43 0 12356667899999998 7888999999999999874321 1356 99999999864 334
Q ss_pred CCCCcccccCCCCceeecccccc-----eEEEEcCCCCCCceEEEECC-------C-c----------------------
Q 014995 259 SGASGIMGLDRSPVSIITRTNTS-----YFSYCLPSPYGSTGYITFGK-------T-D---------------------- 303 (415)
Q Consensus 259 ~~~~GIlGLG~~~~Sl~sQl~~~-----~FSycL~~~~~~~G~L~fG~-------t-G---------------------- 303 (415)
...+||||||++++|+++|+... .|||||++.....|.|+||+ + |
T Consensus 153 ~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v 232 (403)
T 3aup_A 153 RNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNV 232 (403)
T ss_dssp TTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEE
T ss_pred CCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCCCcceE
Confidence 57999999999999999998653 29999998655679999984 1 1
Q ss_pred -----------------------------------Ch-----hhHHHHHHHHH----hhccccCCCCCCCcceeeccCCc
Q 014995 304 -----------------------------------TV-----NTLRSAFHKRM----KKYKKAKGLEDLLDTCYDLSAYE 339 (415)
Q Consensus 304 -----------------------------------Tv-----~~l~~af~~~~----~~~~~~~~~~~~~d~Cy~~~~~~ 339 (415)
|. ..+.+++.+++ ..++.++.. ..++.||+.+.
T Consensus 233 ~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~c~~c~~-- 309 (403)
T 3aup_A 233 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSV-APFGLCFNSNK-- 309 (403)
T ss_dssp CEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCC-TTCSCEECGGG--
T ss_pred EEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCC-CCCCceEECCC--
Confidence 11 22223333333 333333333 45678987543
Q ss_pred ccccceEEEEEcCC--eEEEecCCCeEEEeCCCeEEEEEEecCCC-CCceeechhhhcceEEEEECCCCEEEE-------
Q 014995 340 TVVVPKIAIHFLGG--VDLELDVRGTLVVASVSQVCLGFATYPPD-PNSITLGNVQQRGHEVHYDVAGRRLGF------- 409 (415)
Q Consensus 340 ~~~~P~i~f~F~gG--a~~~l~~~~~l~~~~~~~~Cla~~~~~~~-~~~~IlG~~~~~~~~vvfD~~~~~iGF------- 409 (415)
...+|+|+|+|+|+ ++|+|++++|+++......|++|++.+.+ ...||||++|||++|+|||++++||||
T Consensus 310 ~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~ 389 (403)
T 3aup_A 310 INAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHS 389 (403)
T ss_dssp CCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGG
T ss_pred cCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccc
Confidence 33689999999766 79999999999987556789999976432 357999999999999999999999999
Q ss_pred eeCCCC
Q 014995 410 GPGNCS 415 (415)
Q Consensus 410 a~~~C~ 415 (415)
++++|+
T Consensus 390 ~~~~C~ 395 (403)
T 3aup_A 390 HGVKCA 395 (403)
T ss_dssp GTCCGG
T ss_pred cCCCcc
Confidence 777774
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.3e-44 Score=362.04 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=197.4
Q ss_pred ecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCC
Q 014995 123 NINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFG 202 (415)
Q Consensus 123 ~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~ 202 (415)
.+.++.+.+|+++|.||||||++.|+|||||+++||+|..|..|..+.++.|||++|+||+...
T Consensus 49 ~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~---------------- 112 (370)
T 3psg_A 49 PLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS---------------- 112 (370)
T ss_dssp TTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE----------------
T ss_pred cceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC----------------
Confidence 3445567899999999999999999999999999999999986333456899999999999864
Q ss_pred CCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCC-C--CCCCcccccCCCCcee-----
Q 014995 203 NCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGD-K--SGASGIMGLDRSPVSI----- 274 (415)
Q Consensus 203 ~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~~~~Sl----- 274 (415)
|.|.+.|++|+ +.|.+++|+|+|++.. ++ ++.|||++...+. | ...+||||||++.++.
T Consensus 113 ------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~----v~--~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 179 (370)
T 3psg_A 113 ------QELSITYGTGS-MTGILGYDTVQVGGIS----DT--NQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATP 179 (370)
T ss_dssp ------EEEEEESSSCE-EEEEEEEEEEEETTEE----EE--EEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCC
T ss_pred ------cEEEEEeCCce-EEEEEEEEEEeeCCcc----cC--CeEEEEEEeecccccccCCccceeccCCccccccCCCC
Confidence 78999999998 8999999999999765 77 9999999988773 3 3689999999988753
Q ss_pred -----eccccc--ceEEEEcCCCCCCceEEEECCC---------------------------------------------
Q 014995 275 -----ITRTNT--SYFSYCLPSPYGSTGYITFGKT--------------------------------------------- 302 (415)
Q Consensus 275 -----~sQl~~--~~FSycL~~~~~~~G~L~fG~t--------------------------------------------- 302 (415)
.+|... ..||+||.+.....|.|+|||+
T Consensus 180 ~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~aiiD 259 (370)
T 3psg_A 180 VFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVD 259 (370)
T ss_dssp HHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTTCEEEEEC
T ss_pred HHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEecCCCceEEEc
Confidence 233222 2399999987556899999983
Q ss_pred -cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCCeEEE-E
Q 014995 303 -DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCL-G 375 (415)
Q Consensus 303 -GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~Cl-a 375 (415)
||. ..+.+++.+++... .. .+.+|.++|.....+|+|+|+| ||++++|++++|+++ . ...|+ +
T Consensus 260 TGTs~~~lP~~~~~~i~~~i~a~---~~----~~g~~~v~C~~~~~lP~i~f~~-~g~~~~l~~~~yi~~-~-~~~C~~~ 329 (370)
T 3psg_A 260 TGTSLLTGPTSAIANIQSDIGAS---EN----SDGEMVISCSSIDSLPDIVFTI-DGVQYPLSPSAYILQ-D-DDSCTSG 329 (370)
T ss_dssp TTCCSEEEEHHHHHHHHHHTTCE---EC----TTCCEECCGGGGGGCCCEEEEE-TTEEEEECHHHHEEE-C-SSCEEES
T ss_pred CCCCcEECCHHHHHHHHHHhCCc---cc----CCCcEEEECCCcccCCcEEEEE-CCEEEEECHHHhccc-C-CCEEEEE
Confidence 232 33444444444321 11 2336888888777899999999 789999999999998 3 34698 6
Q ss_pred EEecCC---CCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 376 FATYPP---DPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 376 ~~~~~~---~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
|++... .+..||||++|||++|+|||++++|||||+++
T Consensus 330 ~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 330 FEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 876431 23479999999999999999999999999974
No 4
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2e-43 Score=349.57 Aligned_cols=250 Identities=22% Similarity=0.270 Sum_probs=194.8
Q ss_pred CCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 014995 128 VADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSK 207 (415)
Q Consensus 128 ~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~ 207 (415)
.+.+|+++|.||||+|++.|+|||||+++||+|.+|..|..+..+.|||++|+||+.++ +
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~----------------~---- 72 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVS----------------G---- 72 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECT----------------T----
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcC----------------C----
Confidence 34899999999999999999999999999999999998776677999999999999864 2
Q ss_pred CCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCceeec--------
Q 014995 208 ECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVSIIT-------- 276 (415)
Q Consensus 208 ~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~Sl~s-------- 276 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++...+.| ...+||||||+..++.++
T Consensus 73 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~----v~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 145 (329)
T 3c9x_A 73 -ASWSISYGDGSSSSGDVYTDKVTIGGFS----VN--TQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWF 145 (329)
T ss_dssp -CBEEEECTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred -CeEEEEeCCCCcEEEEEEEEEEEECCEE----Ec--ceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHH
Confidence 8899999999989999999999998765 77 99999999877644 468999999998877543
Q ss_pred -----ccccceEEEEcCCCCCCceEEEECCC----------------------------------------------cCh
Q 014995 277 -----RTNTSYFSYCLPSPYGSTGYITFGKT----------------------------------------------DTV 305 (415)
Q Consensus 277 -----Ql~~~~FSycL~~~~~~~G~L~fG~t----------------------------------------------GTv 305 (415)
|+....||+||.+. ..|.|+|||. ||.
T Consensus 146 ~~l~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt 223 (329)
T 3c9x_A 146 SNAASSLAEPLFTADLRHG--QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTT 223 (329)
T ss_dssp HHHHTTSSSSEEEEECCSS--SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCC
T ss_pred HHHHHhcCCCEEEEEecCC--CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCC
Confidence 33333499999863 5799999982 222
Q ss_pred -hh-HHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeC--CCeEEEE-EEecC
Q 014995 306 -NT-LRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS--VSQVCLG-FATYP 380 (415)
Q Consensus 306 -~~-l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~--~~~~Cla-~~~~~ 380 (415)
.. ..+.+.+..+.++.+.. .....-|.++|. ..+|+|+|+| +|++++||+++|++... ....|++ |++..
T Consensus 224 ~~~lp~~~~~~i~~~i~~a~~--~~~~~~~~~~C~--~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~ 298 (329)
T 3c9x_A 224 LLLLDDNVVDAYYANVQSAQY--DNQQEGVVFDCD--EDLPSFSFGV-GSSTITIPGDLLNLTPLEEGSSTCFGGLQSSS 298 (329)
T ss_dssp SEEECHHHHHHHHTTCTTCEE--ETTTTEEEEETT--CCCCCEEEEE-TTEEEEECGGGGEEEESSTTCSEEEESEEECT
T ss_pred cEeCCHHHHHHHHHhCCCcEE--cCCCCEEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeeccCCCCCeEEEEEEcCC
Confidence 11 12222222222221110 001123455665 3589999999 58999999999998763 2478985 77653
Q ss_pred CCCCceeechhhhcceEEEEECCCCEEEEeeC
Q 014995 381 PDPNSITLGNVQQRGHEVHYDVAGRRLGFGPG 412 (415)
Q Consensus 381 ~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~ 412 (415)
..+.||||+.|||++|++||++++|||||+.
T Consensus 299 -~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 299 -GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp -TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred -CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 3468999999999999999999999999974
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=353.31 Aligned_cols=250 Identities=23% Similarity=0.366 Sum_probs=195.8
Q ss_pred CCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC--cccCCCCCCCCCCCCCccccccCCCccccccccCCCCCC
Q 014995 126 DTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI--HCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGN 203 (415)
Q Consensus 126 ~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~ 203 (415)
+..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+...
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~----------------- 79 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT--HSRFQPSQSSTYSQPG----------------- 79 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT--SCCBCGGGCTTCBCCS-----------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC--CCcCCcccCcceEECC-----------------
Confidence 344589999999999999999999999999999999998 4864 5899999999998853
Q ss_pred CCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCC-C--CCCCcccccCCCCcee------
Q 014995 204 CNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGD-K--SGASGIMGLDRSPVSI------ 274 (415)
Q Consensus 204 C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~~~~Sl------ 274 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. ++ ++.|||++...+. | ...+||||||++.++.
T Consensus 80 -----~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~----~~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 147 (351)
T 1tzs_A 80 -----QSFSIQYGTGS-LSGIIGADQVSVEGLT----VV--GQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPV 147 (351)
T ss_dssp -----CEEEEESSSCE-EEEEEEEEEEEETTEE----EE--EEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCH
T ss_pred -----CEEEEEeCCCC-eEEEEEEeEEEECCeE----EC--CeEEEEEEeccccccccCCCceEEecCCccccccCCCcH
Confidence 88999999997 7899999999998765 77 9999999988763 3 3689999999988763
Q ss_pred ----eccccc--ceEEEEcCCCCCC--ceEEEECCC--------------------------------------------
Q 014995 275 ----ITRTNT--SYFSYCLPSPYGS--TGYITFGKT-------------------------------------------- 302 (415)
Q Consensus 275 ----~sQl~~--~~FSycL~~~~~~--~G~L~fG~t-------------------------------------------- 302 (415)
.+|... ..||+||.+.... .|.|+|||.
T Consensus 148 ~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aii 227 (351)
T 1tzs_A 148 FDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIV 227 (351)
T ss_dssp HHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEECTTCEEEEE
T ss_pred HHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEcCCCceEEe
Confidence 333222 2399999986543 799999982
Q ss_pred --cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCC--CeEE
Q 014995 303 --DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASV--SQVC 373 (415)
Q Consensus 303 --GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~--~~~C 373 (415)
||. ..+.+++.+++..... . ..|.++|.....+|+|+|+| +|++++|++++|+++... ...|
T Consensus 228 DSGTs~~~lP~~~~~~l~~~~~~~~~-----~---g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~yi~~~~~~~~~~C 298 (351)
T 1tzs_A 228 DTGTSLITGPSDKIKQLQNAIGAAPV-----D---GEYAVECANLNVMPDVTFTI-NGVPYTLSPTAYTLLDFVDGMQFC 298 (351)
T ss_dssp CTTCSSEEECHHHHHHHHHHHTCEEC-----S---SSEEECGGGGGGSCCEEEEE-TTEEEEECTTTSEECC-----CCE
T ss_pred ccCCcceeCCHHHHHHHHHHhCCccc-----C---CeEEEeCCCCccCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeE
Confidence 232 4444555555543211 1 12455666555789999999 789999999999987532 4579
Q ss_pred E-EEEecCC---CCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 374 L-GFATYPP---DPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 374 l-a~~~~~~---~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
+ +|++... ....||||+.|||++|++||++++|||||+++|.
T Consensus 299 ~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 299 SSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp EESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred EEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 8 7887531 3467999999999999999999999999999984
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.6e-43 Score=348.51 Aligned_cols=252 Identities=20% Similarity=0.355 Sum_probs=201.4
Q ss_pred eeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCc--ccCCCCCCCCCCCCCccccccCCCccccccc
Q 014995 119 TFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIH--CFQQRDPFFYASKSKTFFKIPCNSTSCRILR 196 (415)
Q Consensus 119 ~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~ 196 (415)
++|+.. ..+.+|+++|.||||+|++.|+|||||+++||+|.+|.. |.. .+.|||++|+||+...
T Consensus 4 ~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~---------- 69 (329)
T 1dpj_A 4 DVPLTN--YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL--HSKYDHEASSSYKANG---------- 69 (329)
T ss_dssp EEECEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT--SCCBCGGGCTTCEEEE----------
T ss_pred ceeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC--cCcCCcccCcCeEECC----------
Confidence 455543 235899999999999999999999999999999999986 865 4789999999998843
Q ss_pred cCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCC-CC--CCCCcccccCCCCce
Q 014995 197 ESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSG-DK--SGASGIMGLDRSPVS 273 (415)
Q Consensus 197 ~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g-~f--~~~~GIlGLG~~~~S 273 (415)
|.|.+.|+|| .+.|.+++|+|+|++.. ++ ++.|||++...+ .| ...+||||||+..+|
T Consensus 70 ------------~~~~i~Yg~G-s~~G~~~~D~v~ig~~~----~~--~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s 130 (329)
T 1dpj_A 70 ------------TEFAIQYGTG-SLEGYISQDTLSIGDLT----IP--KQDFAEATSEPGLTFAFGKFDGILGLGYDTIS 130 (329)
T ss_dssp ------------EEEEEEETTE-EEEEEEEEEEEEETTEE----EE--EEEEEEEEECCHHHHTTCSCSEEEECSCGGGC
T ss_pred ------------cEEEEEECCc-eEEEEEEEEEEEECCeE----EC--CeEEEEEEecCccccccCCcceEEEeCCchhh
Confidence 8899999999 58999999999998755 77 999999998776 23 468999999999876
Q ss_pred ee----------cccc--cceEEEEcCCCC---CCceEEEECCC------------------------------------
Q 014995 274 II----------TRTN--TSYFSYCLPSPY---GSTGYITFGKT------------------------------------ 302 (415)
Q Consensus 274 l~----------sQl~--~~~FSycL~~~~---~~~G~L~fG~t------------------------------------ 302 (415)
+. +|.. ...||+||.+.. ...|.|+|||.
T Consensus 131 ~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~ 210 (329)
T 1dpj_A 131 VDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAEL 210 (329)
T ss_dssp GGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEC
T ss_pred ccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecC
Confidence 43 3322 233999998753 24799999992
Q ss_pred ---------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeC
Q 014995 303 ---------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS 368 (415)
Q Consensus 303 ---------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~ 368 (415)
||. ..+.+++.+++... ...+.+|.++|.....+|+|+|+| +|++++|++++|+++.+
T Consensus 211 ~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-------~~~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~~~ 282 (329)
T 1dpj_A 211 ESHGAAIDTGTSLITLPSGLAEMINAEIGAK-------KGWTGQYTLDCNTRDNLPDLIFNF-NGYNFTIGPYDYTLEVS 282 (329)
T ss_dssp SSCEEEECTTCSCEEECHHHHHHHHHHHTCE-------ECTTSSEEECGGGGGGCCCEEEEE-TTEEEEECTTTSEEEET
T ss_pred CCccEEeeCCCCcEECCHHHHHHHHHHhCCc-------cCCCCeEEEECCCCCcCCcEEEEE-CCEEEEECHHHhEecCC
Confidence 333 34444555544321 123457888888777899999999 68999999999999874
Q ss_pred CCeEEE-EEEecC---CCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 369 VSQVCL-GFATYP---PDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 369 ~~~~Cl-a~~~~~---~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
..|+ +|++.. .....||||+.|||++|++||++++|||||+++
T Consensus 283 --~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 283 --GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp --TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 5798 788652 234689999999999999999999999999864
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.1e-43 Score=350.56 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=197.7
Q ss_pred eeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC--cccCCCCCCCCCCCCCccccccCCCccccccc
Q 014995 119 TFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI--HCFQQRDPFFYASKSKTFFKIPCNSTSCRILR 196 (415)
Q Consensus 119 ~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~ 196 (415)
.+|+. +..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+...
T Consensus 5 ~~~l~--n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~---------- 70 (323)
T 3cms_A 5 SVPLT--NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN--HQRFDPRKSSTFQNLG---------- 70 (323)
T ss_dssp EEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT--SCCBCGGGCTTCEEEE----------
T ss_pred eeeeE--eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC--CCCCCCccCCCeEECC----------
Confidence 34554 334589999999999999999999999999999999995 4964 4799999999999863
Q ss_pred cCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCC-CC--CCCCcccccCCCCce
Q 014995 197 ESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSG-DK--SGASGIMGLDRSPVS 273 (415)
Q Consensus 197 ~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g-~f--~~~~GIlGLG~~~~S 273 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. ++ ++.|||++...+ .| ...+||||||+++++
T Consensus 71 ------------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~----~~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 131 (323)
T 3cms_A 71 ------------KPLSIHYGTGS-MQGILGYDTVTVSNIV----DI--QQTVGLSTQEPGDFFTYAEFDGILGMAYPSLA 131 (323)
T ss_dssp ------------EEEEEEETTEE-EEEEEEEEEEEETTEE----EE--EEEEEEEEECCSHHHHHSSCSEEEECSCGGGS
T ss_pred ------------cEEEEEeCCCC-eEEEEEEEEEEECCeE----Ee--ccEEEEEEecccccccccCCceEEecCcchhh
Confidence 88999999997 7999999999998765 77 999999998876 33 368999999998776
Q ss_pred e----------eccccc--ceEEEEcCCCCCCceEEEECCC---------------------------------------
Q 014995 274 I----------ITRTNT--SYFSYCLPSPYGSTGYITFGKT--------------------------------------- 302 (415)
Q Consensus 274 l----------~sQl~~--~~FSycL~~~~~~~G~L~fG~t--------------------------------------- 302 (415)
. .+|... ..||+||.+.... |.|+|||.
T Consensus 132 ~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~-G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~ 210 (323)
T 3cms_A 132 SEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQE-SMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACEGG 210 (323)
T ss_dssp CTTCCCHHHHHHHTTCSSSSEEEEECCTTSSC-EEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEESTTC
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEECCCCCC-EEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecCCC
Confidence 3 334222 2399999886433 99999982
Q ss_pred -------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCC
Q 014995 303 -------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVS 370 (415)
Q Consensus 303 -------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~ 370 (415)
||. ..+.+++.+++..... .+..|.++|.....+|+|+|+| +|++++|++++|+++ ..
T Consensus 211 ~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~--~~ 280 (323)
T 3cms_A 211 CQAILDTGTSKLVGPSSDILNIQQAIGATQN-------QYGEFDIDCDNLSYMPTVVFEI-NGKMYPLTPSAYTSQ--DQ 280 (323)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHHHHTCEEE-------TTTEEEECTTCTTTSCCEEEEE-TTEEEEECHHHHEEE--ET
T ss_pred cEEEEecCCccEeCCHHHHHHHHHHhCCeec-------CCCcEEEECCCCccCceEEEEE-CCEEEEECHHHhccC--CC
Confidence 333 4445555555543211 1124556676556789999999 689999999999998 35
Q ss_pred eEEE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 371 QVCL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 371 ~~Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
..|+ +|++.. ....||||+.|||++|++||++++|||||+++
T Consensus 281 ~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 281 GFCTSGFQSEN-HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp TEEEESEEEC----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEEEeCC-CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 6798 688764 34679999999999999999999999999864
No 8
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.5e-43 Score=347.83 Aligned_cols=246 Identities=23% Similarity=0.300 Sum_probs=193.0
Q ss_pred CCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 014995 128 VADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSK 207 (415)
Q Consensus 128 ~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~ 207 (415)
.+.+|+++|.||||+|++.|+|||||+++||+|.+|..|.. ..+.|||++|+||+.++|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~-------------------- 71 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG-------------------- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE--------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC--------------------
Confidence 34899999999999999999999999999999999998765 678999999999998642
Q ss_pred CCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCceee---------
Q 014995 208 ECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVSII--------- 275 (415)
Q Consensus 208 ~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~Sl~--------- 275 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++...+.| ...+||||||+..++.+
T Consensus 72 -~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~----v~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 144 (329)
T 1oew_A 72 -ATWSISYGDGSSSSGDVYTDTVSVGGLT----VT--GQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFF 144 (329)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred -CeEEEEeCCCCcEEEEEEEEEEEECCEE----Ee--eeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHH
Confidence 8899999999989999999999998765 77 99999999877644 46899999999887653
Q ss_pred ----cccccceEEEEcCCCCCCceEEEECCC----------------------------------------------cCh
Q 014995 276 ----TRTNTSYFSYCLPSPYGSTGYITFGKT----------------------------------------------DTV 305 (415)
Q Consensus 276 ----sQl~~~~FSycL~~~~~~~G~L~fG~t----------------------------------------------GTv 305 (415)
+|+....||+||.+. ..|.|+|||. ||.
T Consensus 145 ~~l~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt 222 (329)
T 1oew_A 145 DNAKASLDSPVFTADLGYH--APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTT 222 (329)
T ss_dssp HHHTTTSSSSEEEEECCSS--SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCC
T ss_pred HHHHHhccCcEEEEEccCC--CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCC
Confidence 233233499999863 5799999982 222
Q ss_pred -----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEe-C-CCeEEEE-EE
Q 014995 306 -----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVA-S-VSQVCLG-FA 377 (415)
Q Consensus 306 -----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~-~-~~~~Cla-~~ 377 (415)
..+.+++.+++ +.+.. .....-|.++|. ..+|+|+|+| ||++++||+++|++.. + ....|++ |+
T Consensus 223 ~~~lP~~~~~~l~~~i---~~a~~--~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~~~C~~~i~ 294 (329)
T 1oew_A 223 LLYLPATVVSAYWAQV---SGAKS--SSSVGGYVFPCS--ATLPSFTFGV-GSARIVIPGDYIDFGPISTGSSSCFGGIQ 294 (329)
T ss_dssp SEEECHHHHHHHHTTS---TTCEE--ETTTTEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEE
T ss_pred CEECCHHHHHHHHHhC---CCcEE--cCCCCEEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeeecCCCCCeEEEEEE
Confidence 23333333332 21110 111123555665 3589999999 7899999999999875 2 3478985 77
Q ss_pred ecCCCCCceeechhhhcceEEEEEC-CCCEEEEeeC
Q 014995 378 TYPPDPNSITLGNVQQRGHEVHYDV-AGRRLGFGPG 412 (415)
Q Consensus 378 ~~~~~~~~~IlG~~~~~~~~vvfD~-~~~~iGFa~~ 412 (415)
+.. ....||||+.|||++|++||+ +++|||||+.
T Consensus 295 ~~~-~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 295 SSA-GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EST-TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eCC-CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 653 356899999999999999999 9999999974
No 9
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-43 Score=349.34 Aligned_cols=248 Identities=20% Similarity=0.301 Sum_probs=194.9
Q ss_pred eeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecC--CCCc---------ccCCCCCCCCCCCCCcccccc
Q 014995 118 FTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCK--PCIH---------CFQQRDPFFYASKSKTFFKIP 186 (415)
Q Consensus 118 ~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~--~C~~---------C~~~~~~~fdps~SsT~~~v~ 186 (415)
+.+|+... +.+|+++|.||||+|++.|+|||||+++||+|. +|.. |. .++.|||++|+||+...
T Consensus 3 ~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT~~~~~ 77 (334)
T 1j71_A 3 VPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCK--QEGTFDPSSSSSAQNLN 77 (334)
T ss_dssp EEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--SSCCBCGGGCTTCEEEE
T ss_pred eeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccccccccccc--CCCcCCcccCCCcccCC
Confidence 45566542 489999999999999999999999999999866 6753 54 45899999999999864
Q ss_pred CCCccccccccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCCCCCCcccc
Q 014995 187 CNSTSCRILRESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDKSGASGIMG 266 (415)
Q Consensus 187 C~s~~C~~~~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f~~~~GIlG 266 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++... ..+||||
T Consensus 78 ----------------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~----~~--~~~fg~~~~~~----~~~GilG 125 (334)
T 1j71_A 78 ----------------------QDFSIEYGDLTSSQGSFYKDTVGFGGIS----IK--NQQFADVTTTS----VDQGIMG 125 (334)
T ss_dssp ----------------------EEEEEEBTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEES----SSSCEEE
T ss_pred ----------------------CceEEEECCCCEEEEEEEEEEEEECCEE----Ec--cEEEEEEEecC----CCccEEE
Confidence 8899999999988999999999998755 77 99999999764 5799999
Q ss_pred cCCCCc--------eeecccccc------eEEEEcCCCCCCceEEEECCC------------------------------
Q 014995 267 LDRSPV--------SIITRTNTS------YFSYCLPSPYGSTGYITFGKT------------------------------ 302 (415)
Q Consensus 267 LG~~~~--------Sl~sQl~~~------~FSycL~~~~~~~G~L~fG~t------------------------------ 302 (415)
||+..+ +++.|+..+ .||+||.+.....|.|+|||.
T Consensus 126 Lg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~ 205 (334)
T 1j71_A 126 IGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFD 205 (334)
T ss_dssp CSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEET
T ss_pred EcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEEC
Confidence 999865 444454332 299999876556899999982
Q ss_pred --------------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceee-ccCCcccccceEEEEEcCCeEEEecCCC
Q 014995 303 --------------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYD-LSAYETVVVPKIAIHFLGGVDLELDVRG 362 (415)
Q Consensus 303 --------------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~-~~~~~~~~~P~i~f~F~gGa~~~l~~~~ 362 (415)
||. ..+.+++.+++..... . ....|. ++|.. +|.|+|+|.||++++|++++
T Consensus 206 g~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~--~----~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~ 276 (334)
T 1j71_A 206 GTSVSTNADVVLDSGTTITYFSQSTADKFARIVGATWD--S----RNEIYRLPSCDL---SGDAVFNFDQGVKITVPLSE 276 (334)
T ss_dssp TEEEEEEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE--T----TTTEEECSSSCC---CSEEEEEESTTCEEEEEGGG
T ss_pred CEeccCCccEEEeCCCCcEecCHHHHHHHHHHcCCccc--C----CCceEEEEcCCC---CCceEEEEcCCcEEEECHHH
Confidence 333 3444455555432111 1 112344 55643 79999999878999999999
Q ss_pred eEEEeCCCeEEE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 363 TLVVASVSQVCL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 363 ~l~~~~~~~~Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
|+++...+..|+ +|.+. +.||||+.|||++|++||++++|||||+++|+
T Consensus 277 y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 326 (334)
T 1j71_A 277 LILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQVKYT 326 (334)
T ss_dssp GEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEECCC
T ss_pred heeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEecCCC
Confidence 999865444598 56643 35999999999999999999999999999995
No 10
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.1e-43 Score=354.93 Aligned_cols=268 Identities=22% Similarity=0.449 Sum_probs=204.8
Q ss_pred eeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCcccccccc
Q 014995 118 FTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRE 197 (415)
Q Consensus 118 ~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~ 197 (415)
..+|+.. +..+.+|+++|.|||| |+|||||+++||+|.+| .+|+.++|.++.|.....
T Consensus 3 ~~~pv~~-~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~----------------~~~~~~~C~s~~C~~~~~ 60 (381)
T 1t6e_X 3 VLAPVTK-DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG----------------QPPAEIPCSSPTCLLANA 60 (381)
T ss_dssp EEEEEEE-CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT----------------CCCCCCBTTSHHHHHHHS
T ss_pred eEEeEEe-cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC----------------CCCCccCCCCchhccccC
Confidence 3456653 3345899999999998 99999999999999875 136788899999987543
Q ss_pred CCCCCCCCC---------CCC-ceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCe----EEEEEEcC--CCCCCCC
Q 014995 198 SFPFGNCNS---------KEC-PFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPF----LLGCINNS--SGDKSGA 261 (415)
Q Consensus 198 ~~~~~~C~~---------~~c-~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~----~FGc~~~~--~g~f~~~ 261 (415)
+. ...|+. ..| .|.+.|+||+.++|++++|+|+|++.++...++ ++ .|||++.+ .+.+...
T Consensus 61 ~~-~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~--~~~~~~~Fg~~~~~~~~~~~~~~ 137 (381)
T 1t6e_X 61 YP-APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVS--KVNVGVLAACAPSKLLASLPRGS 137 (381)
T ss_dssp SC-CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEE--EEEEEEEEEECCGGGGTTSCTTE
T ss_pred CC-CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCcccc--ceeeeeEeecCcccccCCCCCCC
Confidence 32 225642 357 499999999988999999999998643222354 54 67999876 4455689
Q ss_pred CcccccCCCCceeecccccc-----eEEEEcCCCCCCceEEEECCC----------------------------------
Q 014995 262 SGIMGLDRSPVSIITRTNTS-----YFSYCLPSPYGSTGYITFGKT---------------------------------- 302 (415)
Q Consensus 262 ~GIlGLG~~~~Sl~sQl~~~-----~FSycL~~~~~~~G~L~fG~t---------------------------------- 302 (415)
+||||||++++|+++|+..+ .|||||++. ..|.|+||+.
T Consensus 138 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~v 215 (381)
T 1t6e_X 138 TGVAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVV 215 (381)
T ss_dssp EEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEE
T ss_pred ceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEE
Confidence 99999999999999998753 299999875 5799999961
Q ss_pred ---------------------cCh---------hhHHHHHHHHHh-------hcccc-CCCCCCCcceeeccCCc----c
Q 014995 303 ---------------------DTV---------NTLRSAFHKRMK-------KYKKA-KGLEDLLDTCYDLSAYE----T 340 (415)
Q Consensus 303 ---------------------GTv---------~~l~~af~~~~~-------~~~~~-~~~~~~~d~Cy~~~~~~----~ 340 (415)
||. .++.++|.+++. .++++ ... ..++.||+.++.. .
T Consensus 216 g~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~C~~~~~~~~~~~~ 294 (381)
T 1t6e_X 216 GDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAV-APFGVCYDTKTLGNNLGG 294 (381)
T ss_dssp TTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCC-TTCSCEEEGGGCCEETTE
T ss_pred cCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCC-CCCCccCCCCCCcccccC
Confidence 222 455566666664 23333 222 4578999987542 2
Q ss_pred cccceEEEEEcCCeEEEecCCCeEEEeCCCeEEEEEEecCC------CCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 341 VVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCLGFATYPP------DPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 341 ~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~Cla~~~~~~------~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
..+|+|+|+|+||++++|++++|+++...+..|++|++... ....||||++|||++|+|||++++|||||+..
T Consensus 295 ~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 295 YAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp ECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 46899999997789999999999998755778999987643 12579999999999999999999999999854
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=7.6e-43 Score=344.46 Aligned_cols=250 Identities=20% Similarity=0.334 Sum_probs=199.8
Q ss_pred eeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCc--ccCCCCCCCCCCCCCccccccCCCcccccccc
Q 014995 120 FPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIH--CFQQRDPFFYASKSKTFFKIPCNSTSCRILRE 197 (415)
Q Consensus 120 ~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~ 197 (415)
+|+. +..+.+|+++|.||||+|++.|++||||+++||+|.+|.. |.. ++.|||++|+||+...
T Consensus 4 ~~l~--n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~----------- 68 (324)
T 1am5_A 4 EQMK--NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN--HNKFKPRQSSTYVETG----------- 68 (324)
T ss_dssp EEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT--SCCBCGGGCTTCEEEE-----------
T ss_pred eeee--cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC--CCcCCCccCCCeEeCC-----------
Confidence 4444 3345899999999999999999999999999999999984 864 4899999999999863
Q ss_pred CCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCC-C--CCCCcccccCCCCcee
Q 014995 198 SFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGD-K--SGASGIMGLDRSPVSI 274 (415)
Q Consensus 198 ~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~~~~Sl 274 (415)
|.|.+.|+||+ ..|.+++|+|+|++.. ++ ++.|||++...+. | ...+||||||+..++.
T Consensus 69 -----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~----~~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 130 (324)
T 1am5_A 69 -----------KTVDLTYGTGG-MRGILGQDTVSVGGGS----DP--NQELGESQTEPGPFQAAAPFDGILGLAYPSIAA 130 (324)
T ss_dssp -----------EEEEEECSSCE-EEEEEEEEEEESSSSC----EE--EEEEEEEEECCSTTTTTCSSSEEEECSCGGGCG
T ss_pred -----------cEEEEEECCCC-eEEEEEECceeECCcE----Ec--ccEEEEEEecccccccCCCCceEEecCCccccc
Confidence 78999999997 4999999999999766 77 9999999988763 4 3689999999988764
Q ss_pred ec------ccc------cceEEEEcCCCCCCceEEEECCC----------------------------------------
Q 014995 275 IT------RTN------TSYFSYCLPSPYGSTGYITFGKT---------------------------------------- 302 (415)
Q Consensus 275 ~s------Ql~------~~~FSycL~~~~~~~G~L~fG~t---------------------------------------- 302 (415)
.. |+. ...||+||.+.+...|.|+|||.
T Consensus 131 ~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~ 210 (324)
T 1am5_A 131 AGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAACEGCQ 210 (324)
T ss_dssp GGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCCCCEE
T ss_pred cCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeeccCce
Confidence 32 222 22399999987556899999983
Q ss_pred -----cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCCeE
Q 014995 303 -----DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQV 372 (415)
Q Consensus 303 -----GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~ 372 (415)
||. ..+.+++.+++... . . +..|.++|.....+|+|+|+| +|++++|++++|+++. ...
T Consensus 211 aiiDSGTt~~~lp~~~~~~l~~~~~~~-~---~----~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~~--~~~ 279 (324)
T 1am5_A 211 AIVDTGTSKIVAPVSALANIMKDIGAS-E---N----QGEMMGNCASVQSLPDITFTI-NGVKQPLPPSAYIEGD--QAF 279 (324)
T ss_dssp EEECTTCSSEEECTTTHHHHHHHHTCE-E---C----CCCEECCTTSSSSSCCEEEEE-TTEEEEECHHHHEEES--SSC
T ss_pred EEEecCCccEECCHHHHHHHHHHhCCc-c---c----CCcEEEeCCCcccCCcEEEEE-CCEEEEECHHHhcccC--CCe
Confidence 222 44455555555432 1 1 123556676556789999999 6899999999999886 567
Q ss_pred EE-EEEecC---CCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 373 CL-GFATYP---PDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 373 Cl-a~~~~~---~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
|+ +|++.. .....||||+.|||++|++||++++|||||+++
T Consensus 280 C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 280 CTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 98 888753 134689999999999999999999999999874
No 12
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.2e-43 Score=347.48 Aligned_cols=244 Identities=18% Similarity=0.308 Sum_probs=191.5
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+.+|+++|.||||+|++.|+|||||+++||+|.+|..| .+..+.|||++|+||+...
T Consensus 14 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~---------------------- 70 (325)
T 2apr_A 14 DIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG---------------------- 70 (325)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE----------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC----------------------
Confidence 48999999999999999999999999999999999998 6778999999999998842
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCCC--CCCcccccCCCCcee-------ecccc
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDKS--GASGIMGLDRSPVSI-------ITRTN 279 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f~--~~~GIlGLG~~~~Sl-------~sQl~ 279 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++...+.|. ..+||||||+..++. +.|+.
T Consensus 71 ~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~----v~--~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~ 144 (325)
T 2apr_A 71 RTWSISYGDGSSASGILAKDNVNLGGLL----IK--GQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLI 144 (325)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHH
T ss_pred CEEEEEECCCCCEEEEEEEEEEEECCEE----EC--cEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHH
Confidence 8899999999989999999999998765 77 999999998766442 489999999988763 23332
Q ss_pred c------ceEEEEcCCC-CCCceEEEECCC---------------------------------------------cCh--
Q 014995 280 T------SYFSYCLPSP-YGSTGYITFGKT---------------------------------------------DTV-- 305 (415)
Q Consensus 280 ~------~~FSycL~~~-~~~~G~L~fG~t---------------------------------------------GTv-- 305 (415)
. ..||+||.+. ....|.|+|||. ||.
T Consensus 145 ~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~ 224 (325)
T 2apr_A 145 SQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLL 224 (325)
T ss_dssp HTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEECCEEEEECTTCSSE
T ss_pred hcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCEecCCCceEEEecCCccE
Confidence 2 2399999763 235799999982 222
Q ss_pred ---hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCCeEEEE-EEecCC
Q 014995 306 ---NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCLG-FATYPP 381 (415)
Q Consensus 306 ---~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~Cla-~~~~~~ 381 (415)
..+.+++.+++.+. .+.. .-|.++|.. ..+|+|+|+|+ |.+++||+++|++... ...|++ |++..
T Consensus 225 ~lP~~~~~~~~~~~~~~--~~~~-----g~~~~~C~~-~~~p~i~f~f~-g~~~~ip~~~~~~~~~-~~~C~~~i~~~~- 293 (325)
T 2apr_A 225 ILPNNIAASVARAYGAS--DNGD-----GTYTISCDT-SAFKPLVFSIN-GASFQVSPDSLVFEEF-QGQCIAGFGYGN- 293 (325)
T ss_dssp EEEHHHHHHHHHHHTCE--ECSS-----SCEEECSCG-GGCCCEEEEET-TEEEEECGGGGEEEEE-TTEEEESEEEES-
T ss_pred ECCHHHHHHHHHHHhcc--cCCC-----CeEEEECCC-CCCCcEEEEEC-CEEEEECHHHEEEcCC-CCeEEEEEEcCC-
Confidence 22222233333221 1111 124556653 34899999995 5599999999998754 568984 56543
Q ss_pred CCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 382 DPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 382 ~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
.+.||||+.|||++|++||++++|||||+.+
T Consensus 294 -~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 -WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp -SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4579999999999999999999999999864
No 13
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.2e-43 Score=355.14 Aligned_cols=251 Identities=21% Similarity=0.361 Sum_probs=198.1
Q ss_pred eeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC----cccCCCCCCCCCCCCCccccccCCCcccccc
Q 014995 120 FPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI----HCFQQRDPFFYASKSKTFFKIPCNSTSCRIL 195 (415)
Q Consensus 120 ~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~----~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~ 195 (415)
.|+. ++.+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+...
T Consensus 53 ~~l~--n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~--~~~y~~~~SsT~~~~~--------- 119 (383)
T 2x0b_A 53 VILT--NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASDSSSYKHNG--------- 119 (383)
T ss_dssp EEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT--SCCBCGGGCTTCEEEE---------
T ss_pred Eeee--ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC--CCCCCCCCCCcEEECC---------
Confidence 4444 445689999999999999999999999999999999996 4975 4899999999999863
Q ss_pred ccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCC-C--CCCCcccccCCCCc
Q 014995 196 RESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGD-K--SGASGIMGLDRSPV 272 (415)
Q Consensus 196 ~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~~~~ 272 (415)
|.|.+.|++|+ ++|++++|+|+|++.. +. +.|||++...+. | ...+||||||+..+
T Consensus 120 -------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~------v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~ 178 (383)
T 2x0b_A 120 -------------TELTLRYSTGT-VSGFLSQDIITVGGIT------VT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQ 178 (383)
T ss_dssp -------------EEEEEECSSCE-EEEEEEEEEEEETTEE------EE-EEEEEEEECCHHHHTTCSSSEEEECSCGGG
T ss_pred -------------cEEEEEcCCcc-EEEEEEeeEEEEcCce------EE-EEEEEEEecCCcccccCCCceEeccCCCcc
Confidence 88999999997 8999999999998643 34 999999998762 3 47899999999987
Q ss_pred ee----------eccccc--ceEEEEcCCCCCC----ceEEEECCC----------------------------------
Q 014995 273 SI----------ITRTNT--SYFSYCLPSPYGS----TGYITFGKT---------------------------------- 302 (415)
Q Consensus 273 Sl----------~sQl~~--~~FSycL~~~~~~----~G~L~fG~t---------------------------------- 302 (415)
|. .+|... ..||+||.+.... .|.|+|||.
T Consensus 179 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~ 258 (383)
T 2x0b_A 179 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTL 258 (383)
T ss_dssp CGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCC
T ss_pred ccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceE
Confidence 63 344322 2399999986433 799999993
Q ss_pred ------------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEE
Q 014995 303 ------------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLV 365 (415)
Q Consensus 303 ------------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~ 365 (415)
||. ..+.+++.+++...+ .. .-|.++|.....+|+|+|+| +|++++|++++|++
T Consensus 259 ~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-~~-------g~~~v~C~~~~~~P~i~f~~-~g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 259 LCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-RL-------FDYVVKCNEGPTLPDISFHL-GGKEYTLTSADYVF 329 (383)
T ss_dssp BSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-CS-------SCEEEEGGGTTTCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-cC-------CcEEEeccccccCceEEEEE-CCEEEEECHHHhEe
Confidence 233 444555555554332 11 12445566556789999999 68999999999998
Q ss_pred EeCC--CeEEE-EEEecCC---CCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 366 VASV--SQVCL-GFATYPP---DPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 366 ~~~~--~~~Cl-a~~~~~~---~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
+... ...|+ +|++... ....||||++|||++|+|||++++|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 7642 45898 7987531 34689999999999999999999999999864
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.8e-43 Score=350.26 Aligned_cols=255 Identities=25% Similarity=0.357 Sum_probs=200.1
Q ss_pred eeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC---cccCCCCCCCCCCCCCccccccCCCccccc
Q 014995 118 FTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI---HCFQQRDPFFYASKSKTFFKIPCNSTSCRI 194 (415)
Q Consensus 118 ~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~---~C~~~~~~~fdps~SsT~~~v~C~s~~C~~ 194 (415)
..+|+. +..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+...
T Consensus 8 ~~~~l~--~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~--~~~y~~~~SsT~~~~~-------- 75 (361)
T 1mpp_A 8 DTPGLY--DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG--KRFFDPSSSSTFKETD-------- 75 (361)
T ss_dssp EEEEEE--ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS--SCCBCGGGCTTCEEEE--------
T ss_pred ceEEee--cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC--CCcCCCccCCceEecC--------
Confidence 345654 334589999999999999999999999999999999998 5965 5899999999999863
Q ss_pred cccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCC------CC--CCCCcccc
Q 014995 195 LRESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSG------DK--SGASGIMG 266 (415)
Q Consensus 195 ~~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g------~f--~~~~GIlG 266 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. ++ ++.|||++...+ .| ...+||||
T Consensus 76 --------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~----v~--~~~fg~~~~~~~~~~~~~~~~~~~~~GilG 134 (361)
T 1mpp_A 76 --------------YNLNITYGTGG-ANGIYFRDSITVGGAT----VK--QQTLAYVDNVSGPTAEQSPDSELFLDGIFG 134 (361)
T ss_dssp --------------EEEEEECSSCE-EEEEEEEEEEEETTEE----EE--EEEEEEEEEEESGGGSSCTTCSSCCCEEEE
T ss_pred --------------CeEEEEECCce-EEEEEEEEEEEECCEE----Ee--ceEEEEEEeccCccccccccccCCCCCEEE
Confidence 78999999998 7999999999998755 77 999999998765 34 36899999
Q ss_pred cCCCCceeec------------cccc------ceEEEEcCCCCCCceEEEECCC--------------------------
Q 014995 267 LDRSPVSIIT------------RTNT------SYFSYCLPSPYGSTGYITFGKT-------------------------- 302 (415)
Q Consensus 267 LG~~~~Sl~s------------Ql~~------~~FSycL~~~~~~~G~L~fG~t-------------------------- 302 (415)
||++.++... |+.. ..||+||.+. ...|.|+|||.
T Consensus 135 Lg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v 213 (361)
T 1mpp_A 135 AAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDA 213 (361)
T ss_dssp CSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEE
T ss_pred eCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEE
Confidence 9998766432 2222 2399999885 45799999983
Q ss_pred -------------------------cCh-----hhHHHHHHHHHhh-ccccCCCCCCCcceeeccCCccccc-ceEEEEE
Q 014995 303 -------------------------DTV-----NTLRSAFHKRMKK-YKKAKGLEDLLDTCYDLSAYETVVV-PKIAIHF 350 (415)
Q Consensus 303 -------------------------GTv-----~~l~~af~~~~~~-~~~~~~~~~~~d~Cy~~~~~~~~~~-P~i~f~F 350 (415)
||. ..+.+++.+++.. +.. .+..|.++|.....+ |+|+|+|
T Consensus 214 ~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~~g~~~~~C~~~~~~~p~i~f~f 286 (361)
T 1mpp_A 214 PVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE-------SQQGYTVPCSKYQDSKTTFSLVL 286 (361)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE-------ETTEEEEEHHHHTTCCCEEEEEE
T ss_pred EEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC-------CCCcEEEECCCcccCCCcEEEEE
Confidence 111 2233444444432 111 112344555544567 9999999
Q ss_pred c-C-----CeEEEecCCCeEEEeC-CCeEEE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 351 L-G-----GVDLELDVRGTLVVAS-VSQVCL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 351 ~-g-----Ga~~~l~~~~~l~~~~-~~~~Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
. + |++++|++++|+++.. ....|+ +|++. ....||||+.|||++|++||++++|||||+++|+
T Consensus 287 ~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~--~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~ 357 (361)
T 1mpp_A 287 QKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPD--GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASG 357 (361)
T ss_dssp ECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEE--SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTT
T ss_pred EcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeC--CCCCEEEChHHhccEEEEEECCCCEEEEEEcccC
Confidence 4 4 8999999999999864 356898 89876 3457999999999999999999999999999995
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.9e-43 Score=345.65 Aligned_cols=246 Identities=22% Similarity=0.339 Sum_probs=196.3
Q ss_pred CCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCc--ccCCCCCCCCCCCCCccccccCCCccccccccCCCCC
Q 014995 125 NDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIH--CFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFG 202 (415)
Q Consensus 125 ~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~ 202 (415)
.++.+.+|+++|.||||+|++.|++||||+++||+|.+|.. |.. .+.|||++|+||+...
T Consensus 6 ~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~---------------- 67 (320)
T 4aa9_A 6 TSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN--HHRFDPRKSSTFRNLG---------------- 67 (320)
T ss_dssp --CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT--SCCBCGGGCTTCEEEE----------------
T ss_pred eeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC--CCCCCCCCCcCeEcCC----------------
Confidence 34456899999999999999999999999999999999985 754 5899999999999864
Q ss_pred CCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCC-CC--CCCCcccccCCCCcee-----
Q 014995 203 NCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSG-DK--SGASGIMGLDRSPVSI----- 274 (415)
Q Consensus 203 ~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g-~f--~~~~GIlGLG~~~~Sl----- 274 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. ++ ++.|||++...+ .| ...+||||||+..++.
T Consensus 68 ------~~~~i~Yg~gs-~~G~~~~D~v~ig~~~----v~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 134 (320)
T 4aa9_A 68 ------KPLSIHYGTGS-MEGFLGYDTVTVSNIV----DP--NQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVP 134 (320)
T ss_dssp ------EEEEEEETTEE-EEEEEEEEEEEETTEE----EE--EEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCC
T ss_pred ------cEEEEEECCcE-EEEEEEEEEEEECCEe----ec--CeEEEEEEEcccccccccCcccEEecCcccccccCCCC
Confidence 78999999998 7999999999999865 77 999999998876 23 3579999999987653
Q ss_pred -eccccc------ceEEEEcCCCCCCceEEEECCC---------------------------------------------
Q 014995 275 -ITRTNT------SYFSYCLPSPYGSTGYITFGKT--------------------------------------------- 302 (415)
Q Consensus 275 -~sQl~~------~~FSycL~~~~~~~G~L~fG~t--------------------------------------------- 302 (415)
+.|+.. ..||+||.+. ...|.|+|||.
T Consensus 135 ~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiD 213 (320)
T 4aa9_A 135 VFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQAILD 213 (320)
T ss_dssp HHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEESTTCEEEEEC
T ss_pred HHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccCCCcEEEEE
Confidence 333332 2299999985 46799999983
Q ss_pred -cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCCeEEE-E
Q 014995 303 -DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCL-G 375 (415)
Q Consensus 303 -GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~Cl-a 375 (415)
||. ..+.+++.+++... .. .+..|.++|.....+|+|+|+| +|++++|++++|+.+. ...|+ +
T Consensus 214 sGtt~~~lP~~~~~~i~~~~~~~---~~----~~g~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~--~~~C~~~ 283 (320)
T 4aa9_A 214 TGTSVLFGPSSDILKIQMAIGAT---EN----RYGEFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAYTSKD--QGFCTSG 283 (320)
T ss_dssp TTCSSEEEEHHHHHHHHHHTTCE---EC----TTSCEEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEE--TTEEEES
T ss_pred CCCCcEECCHHHHHHHHHHhCCc---cc----CCCcEEEeCCCCCcCceEEEEE-CCEEEEECHHHhccCC--CCeEEEE
Confidence 232 33344444444221 11 1235777787767899999999 6899999999999774 56798 6
Q ss_pred EEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 376 FATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 376 ~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
|++.. ....||||+.|||++|++||++++|||||+++
T Consensus 284 i~~~~-~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 284 FQGDN-NSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEEET-TCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEcCC-CCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 88753 34679999999999999999999999999874
No 16
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5.3e-43 Score=348.06 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=195.5
Q ss_pred eeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecC--CCCc---------ccCCCCCCCCCCCCCcccccc
Q 014995 118 FTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCK--PCIH---------CFQQRDPFFYASKSKTFFKIP 186 (415)
Q Consensus 118 ~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~--~C~~---------C~~~~~~~fdps~SsT~~~v~ 186 (415)
+.+|+.. .+.+|+++|.||||+|++.|+|||||+++||+|. +|.. |. ..+.|||++|+||+...
T Consensus 3 v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT~~~~~ 77 (342)
T 2qzx_A 3 VAVTLHN---EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCK--SAGSYSPASSRTSQNLN 77 (342)
T ss_dssp EEEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGG--TTCCBCGGGCTTCEEEE
T ss_pred eeEEEec---CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCcccccc--CCCcCCcccCCCcccCC
Confidence 3455543 2489999999999999999999999999999865 6753 54 45899999999999864
Q ss_pred CCCccccccccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCCCCCCcccc
Q 014995 187 CNSTSCRILRESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDKSGASGIMG 266 (415)
Q Consensus 187 C~s~~C~~~~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f~~~~GIlG 266 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++... ..+||||
T Consensus 78 ----------------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~----v~--~~~fg~~~~~~----~~~GilG 125 (342)
T 2qzx_A 78 ----------------------TRFDIKYGDGSYAKGKLYKDTVGIGGVS----VR--DQLFANVWSTS----ARKGILG 125 (342)
T ss_dssp ----------------------EEEEEECTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEEC----SSSCEEE
T ss_pred ----------------------CcEEEEeCCCCeEEEEEEEEEEEECCEE----ec--ceEEEEEEecC----CCcCEEE
Confidence 8899999999988999999999998754 77 99999999764 5799999
Q ss_pred cCCCCc--------eeecccccc------eEEEEcCCCCCCceEEEECCC------------------------------
Q 014995 267 LDRSPV--------SIITRTNTS------YFSYCLPSPYGSTGYITFGKT------------------------------ 302 (415)
Q Consensus 267 LG~~~~--------Sl~sQl~~~------~FSycL~~~~~~~G~L~fG~t------------------------------ 302 (415)
||+... +++.|+..+ .||+||.+.....|.|+|||.
T Consensus 126 Lg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~ 205 (342)
T 2qzx_A 126 IGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVR 205 (342)
T ss_dssp CSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEET
T ss_pred EccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEEC
Confidence 999865 444454332 299999876556899999982
Q ss_pred --------------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCe
Q 014995 303 --------------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGT 363 (415)
Q Consensus 303 --------------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~ 363 (415)
||. ..+.+++.+++....... ...+..|.++|.. +|.|+|+|.||++++|++++|
T Consensus 206 g~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~---~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~~ 279 (342)
T 2qzx_A 206 GRNVDANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFD---SAGNKVYVADCKT---SGTIDFQFGNNLKISVPVSEF 279 (342)
T ss_dssp TEEEEEEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEEC---TTSCEEEEECTTC---CCEEEEEETTTEEEEEEGGGG
T ss_pred CEecCCCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeec---cCCCcEEEEECCC---CCcEEEEECCCcEEEEcHHHh
Confidence 333 444455555554311101 1122356677753 799999998789999999999
Q ss_pred EEEe-----CCCeEEE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 364 LVVA-----SVSQVCL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 364 l~~~-----~~~~~Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
+++. +....|+ +|.+. +.||||+.|||++|++||++++|||||+++|+
T Consensus 280 ~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 2qzx_A 280 LFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYT 333 (342)
T ss_dssp EECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred cccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCC
Confidence 9874 2245798 45543 35999999999999999999999999999995
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.3e-42 Score=344.48 Aligned_cols=252 Identities=20% Similarity=0.342 Sum_probs=199.7
Q ss_pred eeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeee-----cCCCCcccCCCCCCCCCCCCCccccccCCCccc
Q 014995 118 FTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQ-----CKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSC 192 (415)
Q Consensus 118 ~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~-----c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C 192 (415)
+++|+... +.+|+++|.||||+|++.|++||||+++||+ |.+|..|.. .+.|||++|+||+.+.
T Consensus 3 i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~--~~~y~~~~SsT~~~~~------ 71 (339)
T 3fv3_A 3 ISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS--SGTFTPSSSSSYKNLG------ 71 (339)
T ss_dssp EEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT--TCCBCGGGCTTCEEEE------
T ss_pred eeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC--CCcCCCccCcceeeCC------
Confidence 45666543 3789999999999999999999999999998 777767864 5899999999999874
Q ss_pred cccccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCCCCCCcccccCCCCc
Q 014995 193 RILRESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDKSGASGIMGLDRSPV 272 (415)
Q Consensus 193 ~~~~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f~~~~GIlGLG~~~~ 272 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++...+ .+||||||++.+
T Consensus 72 ----------------~~~~i~Yg~gs~~~G~~~~D~v~~g~~~----v~--~~~fg~~~~~~~----~~GilGLg~~~~ 125 (339)
T 3fv3_A 72 ----------------AAFTIRYGDGSTSQGTWGKDTVTINGVS----IT--GQQIADVTQTSV----DQGILGIGYTSN 125 (339)
T ss_dssp ----------------EEEEEECTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEESS----SSCEEECSCGGG
T ss_pred ----------------ceEEEEECCCceEEEEEEEEEEEECCEE----EC--ceEEEEEEecCC----CceeEEecCccc
Confidence 8899999999889999999999999765 77 999999998764 699999999876
Q ss_pred e----------------eecccccc------eEEEEcCCCCCCceEEEECCC----------------------------
Q 014995 273 S----------------IITRTNTS------YFSYCLPSPYGSTGYITFGKT---------------------------- 302 (415)
Q Consensus 273 S----------------l~sQl~~~------~FSycL~~~~~~~G~L~fG~t---------------------------- 302 (415)
+ ++.|+..+ .||+||.+.....|.|+|||.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~ 205 (339)
T 3fv3_A 126 EAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVN 205 (339)
T ss_dssp CCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEE
T ss_pred cccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEE
Confidence 4 34445432 299999987666899999982
Q ss_pred ----------------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCC
Q 014995 303 ----------------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVR 361 (415)
Q Consensus 303 ----------------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~ 361 (415)
||. ..+.+++.+++....... .....-|.++|.. ..+|.|+|+|.+|++++|+++
T Consensus 206 v~g~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~ 281 (339)
T 3fv3_A 206 LKGSSFSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV---ARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNT 281 (339)
T ss_dssp ESSCEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE---ETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGG
T ss_pred ECCEeecCCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc---cccCceEEEecCC-CCCCcEEEEECCCCEEEECHH
Confidence 333 444455555554211000 0012235566654 458999999977899999999
Q ss_pred CeEEEeCCCeEE-EEEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 362 GTLVVASVSQVC-LGFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 362 ~~l~~~~~~~~C-la~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
+|+++.+ ...| ++|++ .+.||||+.|||++|++||++++|||||+++|+
T Consensus 282 ~~~~~~~-~~~C~~~i~~----~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 331 (339)
T 3fv3_A 282 EYVYQNG-DGTCLWGIQP----SDDTILGDNFLRHAYLLYNLDANTISIAQVKYT 331 (339)
T ss_dssp GGEEECS-SSCEEESEEE----CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred HheeeCC-CCeEEEEEEe----CCcEEeChHHHhCEEEEEECCCCEEEEEecCCC
Confidence 9998864 3468 58887 246999999999999999999999999999995
No 18
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=6.2e-43 Score=345.77 Aligned_cols=245 Identities=25% Similarity=0.406 Sum_probs=195.9
Q ss_pred CCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCc--ccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCC
Q 014995 128 VADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIH--CFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCN 205 (415)
Q Consensus 128 ~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~ 205 (415)
.+.+|+++|.||||+|++.|+|||||+++||+|.+|.. |.. ++.|||++|+||+...
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~------------------- 68 (329)
T 1htr_B 10 MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS--HSRFNPSESSTYSTNG------------------- 68 (329)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT--SCCBCGGGCTTCEEEE-------------------
T ss_pred cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC--CCcCCCccCCCeEECC-------------------
Confidence 45899999999999999999999999999999999984 864 5899999999999863
Q ss_pred CCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCC-C--CCCCcccccCCCCceee-------
Q 014995 206 SKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGD-K--SGASGIMGLDRSPVSII------- 275 (415)
Q Consensus 206 ~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~~~~Sl~------- 275 (415)
|.|.+.|+||+ ..|.+++|+|+|++.. ++ ++.|||++...+. | ...+||||||+..++..
T Consensus 69 ---~~~~i~Yg~gs-~~G~~~~D~v~~g~~~----~~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 138 (329)
T 1htr_B 69 ---QTFSLQYGSGS-LTGFFGYDTLTVQSIQ----VP--NQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQ 138 (329)
T ss_dssp ---EEEEEEETTEE-EEEEEEEEEEEETTEE----EE--EEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHH
T ss_pred ---cEEEEEeCCCC-eEEEEEeeeEEEcceE----EC--ceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHH
Confidence 78999999998 4999999999998755 77 9999999988763 3 36899999999987643
Q ss_pred ---cccc--cceEEEEcCCCCCC-ceEEEECCC-----------------------------------------------
Q 014995 276 ---TRTN--TSYFSYCLPSPYGS-TGYITFGKT----------------------------------------------- 302 (415)
Q Consensus 276 ---sQl~--~~~FSycL~~~~~~-~G~L~fG~t----------------------------------------------- 302 (415)
+|.. ...||+||.+.... .|.|+|||.
T Consensus 139 ~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDS 218 (329)
T 1htr_B 139 GMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDT 218 (329)
T ss_dssp HHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECT
T ss_pred HHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEec
Confidence 2322 22399999986544 799999993
Q ss_pred cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCCeEEE-EE
Q 014995 303 DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCL-GF 376 (415)
Q Consensus 303 GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~Cl-a~ 376 (415)
||. ..+.+++.+++...... +.-|.++|.....+|+|+|+| +|++++|++++|+++.. + .|+ +|
T Consensus 219 GTt~~~lp~~~~~~l~~~~~~~~~~-------~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~~~-g-~C~~~~ 288 (329)
T 1htr_B 219 GTSLLTVPQQYMSALLQATGAQEDE-------YGQFLVNCNSIQNLPSLTFII-NGVEFPLPPSSYILSNN-G-YCTVGV 288 (329)
T ss_dssp TCCSEEEEGGGHHHHHHHHTCEECT-------TSCEEECGGGGGGSCCEEEEE-TTEEEEECHHHHEEECS-S-CEEESE
T ss_pred CCccEECCHHHHHHHHHHhCCeecC-------CCeEEEeCCCcccCCcEEEEE-CCEEEEECHHHhcccCC-C-EEEEEE
Confidence 222 44556666665432211 112445565555789999999 68999999999999875 3 898 78
Q ss_pred EecC---CCCC-ceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 377 ATYP---PDPN-SITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 377 ~~~~---~~~~-~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
++.. .... .||||+.|||++|++||++++|||||+++
T Consensus 289 ~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 289 EPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 8653 1234 89999999999999999999999999864
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=7.8e-42 Score=344.21 Aligned_cols=251 Identities=21% Similarity=0.322 Sum_probs=197.7
Q ss_pred eeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC--cccCCCCCCCCCCCCCccccccCCCccccccc
Q 014995 119 TFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI--HCFQQRDPFFYASKSKTFFKIPCNSTSCRILR 196 (415)
Q Consensus 119 ~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~ 196 (415)
.+|+. +..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. .+.|||++|+||+...
T Consensus 53 ~~pl~--~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~---------- 118 (375)
T 1miq_A 53 VIELD--DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI--KNLYDSSKSKSYEKDG---------- 118 (375)
T ss_dssp CCCGG--GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG--SCCBCGGGCTTCEEEE----------
T ss_pred eEEcc--cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC--CCcCCCccCCceEECC----------
Confidence 35554 334589999999999999999999999999999999997 4864 5899999999999863
Q ss_pred cCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEc----CCCCC--CCCCcccccCCC
Q 014995 197 ESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINN----SSGDK--SGASGIMGLDRS 270 (415)
Q Consensus 197 ~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~----~~g~f--~~~~GIlGLG~~ 270 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. ++ + .|||++. .. .| ...+||||||++
T Consensus 119 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~----v~--~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~ 177 (375)
T 1miq_A 119 ------------TKVDITYGSGT-VKGFFSKDLVTLGHLS----MP--Y-KFIEVTDTDDLEP-IYSSVEFDGILGLGWK 177 (375)
T ss_dssp ------------EEEEEEETTEE-EEEEEEEEEEEETTEE----EE--E-EEEEEEECGGGTT-HHHHSCCCEEEECSSC
T ss_pred ------------cEEEEEeCCCe-EEEEEEEEEEEEcCce----EC--c-EEEEEEecccccc-ccccCCCceEEeCCCC
Confidence 78999999998 7999999999998765 77 8 9999998 54 34 368999999999
Q ss_pred Cceee----------ccccc--ceEEEEcCCCCCCceEEEECCC------------------------------------
Q 014995 271 PVSII----------TRTNT--SYFSYCLPSPYGSTGYITFGKT------------------------------------ 302 (415)
Q Consensus 271 ~~Sl~----------sQl~~--~~FSycL~~~~~~~G~L~fG~t------------------------------------ 302 (415)
.++.. +|... ..||+||++.+...|.|+|||+
T Consensus 178 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~i~v~g~~~~~~ 257 (375)
T 1miq_A 178 DLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLDVHFGKQTMEKA 257 (375)
T ss_dssp CTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEEEEETTEEEEEE
T ss_pred cccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEEEEECCEEcccc
Confidence 87643 33222 2399999986546899999983
Q ss_pred ------cCh-----hhHHHHHHHHHhh-ccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeC--
Q 014995 303 ------DTV-----NTLRSAFHKRMKK-YKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS-- 368 (415)
Q Consensus 303 ------GTv-----~~l~~af~~~~~~-~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~-- 368 (415)
||. ..+.+++.+++.. +... ...|.++|.. ..+|+|+|+| +|++++|++++|+++..
T Consensus 258 ~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~-------~g~~~~~C~~-~~~P~i~f~f-~g~~~~l~~~~yi~~~~~~ 328 (375)
T 1miq_A 258 NVIVDSGTTTITAPSEFLNKFFANLNVIKVPF-------LPFYVTTCDN-KEMPTLEFKS-ANNTYTLEPEYYMNPILEV 328 (375)
T ss_dssp EEEECTTBSSEEECHHHHHHHHHHHTCEECTT-------SSCEEEETTC-TTCCCEEEEC-SSCEEEECGGGSEEESSSS
T ss_pred eEEecCCCccEEcCHHHHHHHHHHhCCcccCC-------CCeEEEECCC-CCCCcEEEEE-CCEEEEECHHHhEeeccCC
Confidence 222 3344555555543 2111 1124455654 5689999999 68999999999999864
Q ss_pred CCeEEE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 369 VSQVCL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 369 ~~~~Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
....|+ +|++.......||||++|||++|++||++++|||||+++
T Consensus 329 g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 329 DDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 345898 898764323689999999999999999999999999864
No 20
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.2e-42 Score=341.86 Aligned_cols=254 Identities=22% Similarity=0.385 Sum_probs=200.1
Q ss_pred ceeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC----cccCCCCCCCCCCCCCccccccCCCccc
Q 014995 117 AFTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI----HCFQQRDPFFYASKSKTFFKIPCNSTSC 192 (415)
Q Consensus 117 ~~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~----~C~~~~~~~fdps~SsT~~~v~C~s~~C 192 (415)
.+.+|+. +..+.+|+++|.||||+|++.|++||||+++||+|.+|. .|.. .+.|||++|+||++..
T Consensus 7 ~~~~~l~--n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~--~~~y~~~~SsT~~~~~------ 76 (341)
T 3k1w_A 7 TSSVILT--NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASDSSSYKHNG------ 76 (341)
T ss_dssp CEEEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHT--SCCBCGGGCTTCEEEE------
T ss_pred Cccccce--EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccC--CCCCCCCcCcCeeECC------
Confidence 3455654 345689999999999999999999999999999999998 4863 5899999999999853
Q ss_pred cccccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCC-C--CCCCcccccCC
Q 014995 193 RILRESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGD-K--SGASGIMGLDR 269 (415)
Q Consensus 193 ~~~~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~ 269 (415)
|.|.+.|++|+ +.|.+++|+|+|++.. + ++.|||++...+. | ...+||||||+
T Consensus 77 ----------------~~~~i~Yg~gs-~~G~~~~D~v~ig~~~------v-~~~fg~~~~~~~~~~~~~~~~GilGLg~ 132 (341)
T 3k1w_A 77 ----------------TELTLRYSTGT-VSGFLSQDIITVGGIT------V-TQMFGEVTEMPALPFMLAEFDGVVGMGF 132 (341)
T ss_dssp ----------------EEEEEEETTEE-EEEEEEEEEEEETTEE------E-EEEEEEEEECCHHHHTTCSSSEEEECSC
T ss_pred ----------------CEEEEEECCcE-EEEEEEEEEEEECCce------e-eEEEEEEEEccccccccCCcceEEECCc
Confidence 88999999998 8999999999998644 3 7999999988763 3 36899999999
Q ss_pred CCce----------eeccccc--ceEEEEcCCCC----CCceEEEECCC-------------------------------
Q 014995 270 SPVS----------IITRTNT--SYFSYCLPSPY----GSTGYITFGKT------------------------------- 302 (415)
Q Consensus 270 ~~~S----------l~sQl~~--~~FSycL~~~~----~~~G~L~fG~t------------------------------- 302 (415)
+.++ +.+|... ..||+||.+.. ...|.|+|||.
T Consensus 133 ~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~ 212 (341)
T 3k1w_A 133 IEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGS 212 (341)
T ss_dssp GGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETT
T ss_pred hhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECC
Confidence 8876 3344222 23999999864 24799999983
Q ss_pred ---------------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCC
Q 014995 303 ---------------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRG 362 (415)
Q Consensus 303 ---------------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~ 362 (415)
||. ..+.+++.+++... ... . . |.++|.....+|+|+|+| +|++++|++++
T Consensus 213 ~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~---~~~-~--g--~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~ 283 (341)
T 3k1w_A 213 STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK---KRL-F--D--YVVKCNEGPTLPDISFHL-GGKEYTLTSAD 283 (341)
T ss_dssp EEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE---ECS-S--C--EEEEGGGGGGCCCEEEEE-TTEEEEECHHH
T ss_pred EEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCe---ecC-C--C--eEEeCCCCCcCCcEEEEE-CCEEEEECHHH
Confidence 232 34444455544321 111 1 2 778887767899999999 68999999999
Q ss_pred eEEEeC--CCeEEE-EEEecC---CCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 363 TLVVAS--VSQVCL-GFATYP---PDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 363 ~l~~~~--~~~~Cl-a~~~~~---~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
|+++.. ....|+ +|++.. .....||||+.|||++|++||++++|||||+++
T Consensus 284 ~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 284 YVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred heeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 998753 367898 788742 234679999999999999999999999999874
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=6.9e-42 Score=339.56 Aligned_cols=243 Identities=20% Similarity=0.312 Sum_probs=189.9
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCC--CC---------cccCCCCCCCCCCCCCccccccCCCcccccccc
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKP--CI---------HCFQQRDPFFYASKSKTFFKIPCNSTSCRILRE 197 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~--C~---------~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~ 197 (415)
+.+|+++|.||||+|++.|++||||+++||+|.. |. .|. ..+.|||++|+||+.+.
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT~~~~~----------- 77 (342)
T 3pvk_A 11 QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCK--QKGTYDPSGSSASQDLN----------- 77 (342)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--TTCCBCGGGCTTCEEEE-----------
T ss_pred CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCC--CCCcCCCccCcceeecC-----------
Confidence 4899999999999999999999999999998543 42 364 35899999999999874
Q ss_pred CCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCCCCCCcccccCCCCc-----
Q 014995 198 SFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDKSGASGIMGLDRSPV----- 272 (415)
Q Consensus 198 ~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f~~~~GIlGLG~~~~----- 272 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++... ..+||||||+..+
T Consensus 78 -----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~~----v~--~~~fg~~~~~~----~~~GilGLg~~~~~~~~~ 136 (342)
T 3pvk_A 78 -----------TPFKIGYGDGSSSQGTLYKDTVGFGGVS----IK--NQVLADVDSTS----IDQGILGVGYKTNEAGGS 136 (342)
T ss_dssp -----------EEEEEECSSSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEES----SSSCEEECSCGGGCSSCS
T ss_pred -----------CeEEEEecCCCeEEEEEEEEEEEECCEE----ec--ceEEEEEEccC----CCccEEEecCcccccccc
Confidence 7899999999989999999999999765 77 99999998765 5799999999874
Q ss_pred --eeecccccc------eEEEEcCCCCCCceEEEECCC------------------------------------------
Q 014995 273 --SIITRTNTS------YFSYCLPSPYGSTGYITFGKT------------------------------------------ 302 (415)
Q Consensus 273 --Sl~sQl~~~------~FSycL~~~~~~~G~L~fG~t------------------------------------------ 302 (415)
+++.|+..+ .||+||.+.....|.|+|||.
T Consensus 137 ~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~i 216 (342)
T 3pvk_A 137 YDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTDNVDVL 216 (342)
T ss_dssp SCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCCCceEE
Confidence 444555432 299999886666899999982
Q ss_pred ---cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeC--C---
Q 014995 303 ---DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS--V--- 369 (415)
Q Consensus 303 ---GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~--~--- 369 (415)
||. ..+.+++.+++....... .....+|.++|.. +|.|+|+|++|++++||+++|+++.. .
T Consensus 217 iDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~---~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~ 290 (342)
T 3pvk_A 217 LDSGTTITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCNL---SGDVVFNFSKNAKISVPASEFAASLQGDDGQP 290 (342)
T ss_dssp ECTTCSSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECSCC---CSEEEEEESTTCEEEEEGGGGEEC--------
T ss_pred EeCCCCCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEecCC---CCceEEEECCCCEEEEcHHHheeeccccCCCc
Confidence 333 344444554443211111 1113357777764 49999999778999999999998731 2
Q ss_pred CeEEE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 370 SQVCL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 370 ~~~Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
...|+ +|.+. +.||||+.|||++|++||++++|||||+++|+
T Consensus 291 ~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 3pvk_A 291 YDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQVKYT 333 (342)
T ss_dssp --CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred CCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCC
Confidence 26797 66652 46999999999999999999999999999995
No 22
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.1e-41 Score=350.21 Aligned_cols=257 Identities=19% Similarity=0.293 Sum_probs=197.4
Q ss_pred eeeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC--cccCCCCCCCCCCCCCccccccCCCcccccc
Q 014995 118 FTFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI--HCFQQRDPFFYASKSKTFFKIPCNSTSCRIL 195 (415)
Q Consensus 118 ~~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~ 195 (415)
..+|+. +..+.+|+++|.||||+|++.|++||||+++||+|.+|. .|.. ++.|||++|+||+...
T Consensus 128 ~~~~L~--n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~--~~~ydps~SsT~~~~~--------- 194 (453)
T 2bju_A 128 DNIELV--DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT--KHLYDSSKSRTYEKDG--------- 194 (453)
T ss_dssp EEEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG--SCCBCGGGCTTCEEEE---------
T ss_pred CceeeE--ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC--CCcCCCccCCceeECC---------
Confidence 345554 334589999999999999999999999999999999997 4854 5899999999999863
Q ss_pred ccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCC--CC-C--CCCCcccccCCC
Q 014995 196 RESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSS--GD-K--SGASGIMGLDRS 270 (415)
Q Consensus 196 ~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~--g~-f--~~~~GIlGLG~~ 270 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. +. +.|||++... |. | ...+||||||++
T Consensus 195 -------------~~~~i~YgdGs-~~G~~~~Dtv~ig~~~------v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~ 253 (453)
T 2bju_A 195 -------------TKVEMNYVSGT-VSGFFSKDLVTVGNLS------LP-YKFIEVIDTNGFEPTYTASTFDGILGLGWK 253 (453)
T ss_dssp -------------EEEEEECSSSE-EEEEEEEEEEEETTEE------EE-EEEEEEEECGGGTTHHHHSSCCEEEECSCG
T ss_pred -------------cEEEEEcCCCC-eEEEEEEEEEEEeCcE------EE-EEEEEEEEecccCccccccCCceeEeccCC
Confidence 88999999998 7999999999998643 34 9999999887 63 3 468999999998
Q ss_pred Cceee----------ccccc--ceEEEEcCCCCCCceEEEECCC------c-----------------------------
Q 014995 271 PVSII----------TRTNT--SYFSYCLPSPYGSTGYITFGKT------D----------------------------- 303 (415)
Q Consensus 271 ~~Sl~----------sQl~~--~~FSycL~~~~~~~G~L~fG~t------G----------------------------- 303 (415)
.++.. +|... ..||+||++.+...|.|+|||. |
T Consensus 254 ~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~I~Vgg~~~~~~ 333 (453)
T 2bju_A 254 DLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLDAHVGNIMLEKA 333 (453)
T ss_dssp GGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred cccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEEEEECcEEeccc
Confidence 77643 33222 2399999986546799999983 1
Q ss_pred -------Ch--hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeC--CCeE
Q 014995 304 -------TV--NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS--VSQV 372 (415)
Q Consensus 304 -------Tv--~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~--~~~~ 372 (415)
|. ....+.+.+..+.+...+.. ....|.++|.. ..+|+|+|+| +|++++|++++|+++.. ....
T Consensus 334 ~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~~---~g~~~~v~C~~-~~~P~itf~f-gg~~~~l~~~~yi~~~~~~g~~~ 408 (453)
T 2bju_A 334 NCIVDSGTSAITVPTDFLNKMLQNLDVIKVP---FLPFYVTLCNN-SKLPTFEFTS-ENGKYTLEPEYYLQHIEDVGPGL 408 (453)
T ss_dssp EEEECTTCCSEEECHHHHHHHTTTSSCEECT---TSSCEEEETTC-TTCCCEEEEC-SSCEEEECHHHHEEECTTTSTTE
T ss_pred cEEEcCCCCeEecCHHHHHHHHHHhCCcccC---CCceEEEecCC-CCCCcEEEEE-CCEEEEECHHHhEeecccCCCce
Confidence 11 11122233332222221111 11146666765 6789999999 68999999999999874 3468
Q ss_pred EE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 373 CL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 373 Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
|+ +|++.....+.||||++|||++|+|||++++|||||+++
T Consensus 409 C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 409 CMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 98 888765334589999999999999999999999999864
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.5e-41 Score=349.30 Aligned_cols=257 Identities=23% Similarity=0.418 Sum_probs=193.0
Q ss_pred CCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC---cccCCCCCCCCCCCCCccccccCCCccccccccCCCC
Q 014995 125 NDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI---HCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPF 201 (415)
Q Consensus 125 ~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~---~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~ 201 (415)
.++.+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|..+ +.|||++|+||+...
T Consensus 47 ~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~--------------- 109 (478)
T 1qdm_A 47 KNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH--SRYKAGASSTYKKNG--------------- 109 (478)
T ss_dssp CCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS--CCBCGGGCTTCBCCC---------------
T ss_pred EeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC--CCCCcccCCCeeeCC---------------
Confidence 3444589999999999999999999999999999999996 49754 799999999998753
Q ss_pred CCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCC-C--CCCCcccccCCCCcee----
Q 014995 202 GNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGD-K--SGASGIMGLDRSPVSI---- 274 (415)
Q Consensus 202 ~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~~~~Sl---- 274 (415)
|.|.+.|+||+ ++|++++|+|+|++.. ++ ++.|||++...+. | ...+||||||++.+|+
T Consensus 110 -------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~----v~--~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~ 175 (478)
T 1qdm_A 110 -------KPAAIQYGTGS-IAGYFSEDSVTVGDLV----VK--DQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAV 175 (478)
T ss_dssp -------CEEEEEETTEE-EEEEEEEEEEEETTEE----EE--EEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCC
T ss_pred -------cEEEEEcCCCC-eEEEEEEEEEEECCeE----EC--CEEEEEEEecCCcccccccccceecccccccccCCCC
Confidence 78999999998 7999999999998765 77 9999999987663 3 4689999999998763
Q ss_pred ------eccccc--ceEEEEcCCCC--CCceEEEECCC------------------------------------------
Q 014995 275 ------ITRTNT--SYFSYCLPSPY--GSTGYITFGKT------------------------------------------ 302 (415)
Q Consensus 275 ------~sQl~~--~~FSycL~~~~--~~~G~L~fG~t------------------------------------------ 302 (415)
++|... ..||+||++.. ...|.|+|||+
T Consensus 176 p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~~ 255 (478)
T 1qdm_A 176 PVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCA 255 (478)
T ss_dssp CHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTTTCEE
T ss_pred cHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecCCCce
Confidence 344322 23999998753 35799999983
Q ss_pred -----cCh-----hhHHHHHHHHHhhcc-----------------------ccC--------------CC----------
Q 014995 303 -----DTV-----NTLRSAFHKRMKKYK-----------------------KAK--------------GL---------- 325 (415)
Q Consensus 303 -----GTv-----~~l~~af~~~~~~~~-----------------------~~~--------------~~---------- 325 (415)
||. ..+.+++.+++.... ..+ +.
T Consensus 256 aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v 335 (478)
T 1qdm_A 256 AIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSV 335 (478)
T ss_dssp EEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------
T ss_pred EEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccc
Confidence 232 233333333332100 000 00
Q ss_pred -----------------------------------------CCCCcceeec---------cCCcccccceEEEEEcCCeE
Q 014995 326 -----------------------------------------EDLLDTCYDL---------SAYETVVVPKIAIHFLGGVD 355 (415)
Q Consensus 326 -----------------------------------------~~~~d~Cy~~---------~~~~~~~~P~i~f~F~gGa~ 355 (415)
....+.|+.+ +|.....+|+|+|+| ||++
T Consensus 336 ~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~-gg~~ 414 (478)
T 1qdm_A 336 VDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTI-GGKK 414 (478)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEE-TTEE
T ss_pred ccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEEEE-CCEE
Confidence 0001345443 444445789999999 6899
Q ss_pred EEecCCCeEEEeCC--CeEEE-EEEecC---CCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 356 LELDVRGTLVVASV--SQVCL-GFATYP---PDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 356 ~~l~~~~~l~~~~~--~~~Cl-a~~~~~---~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
++|++++|++..+. ...|+ +|+... ..+..||||++|||++|+|||++++|||||++.
T Consensus 415 ~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 415 FALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 99999999998643 45798 587543 124689999999999999999999999999863
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.3e-41 Score=335.02 Aligned_cols=245 Identities=14% Similarity=0.210 Sum_probs=194.5
Q ss_pred CCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC--cccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCC
Q 014995 128 VADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI--HCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCN 205 (415)
Q Consensus 128 ~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~ 205 (415)
.+.+|+++|.|| +|++.|+|||||+++||+|.+|. .|+.+.++.|||++| ||+...
T Consensus 15 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~------------------- 72 (330)
T 1yg9_A 15 INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG------------------- 72 (330)
T ss_dssp ECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE-------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC-------------------
Confidence 348899999999 99999999999999999999997 496556689999999 998753
Q ss_pred CCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC--CCCCcccccCCCCce----------
Q 014995 206 SKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK--SGASGIMGLDRSPVS---------- 273 (415)
Q Consensus 206 ~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f--~~~~GIlGLG~~~~S---------- 273 (415)
|.|.+.|+||+. .|.+++|+|+|++.. ++ ++.|||++.....| ...+||||||++.++
T Consensus 73 ---~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~----~~--~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 142 (330)
T 1yg9_A 73 ---NVQVKFFDTGSA-VGRGIEDSLTISQLT----TS--QQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLE 142 (330)
T ss_dssp ---EEEEEETTTEEE-EEEEEEEEEEETTEE----EE--EEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHH
T ss_pred ---CEEEEEECCceE-EEEEEEEEEEECCEE----Ec--CeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHH
Confidence 789999999985 999999999998765 77 99999999873333 368999999999877
Q ss_pred -eecccc-cceEEEEcCCCCCC--ceEEEECCC---------------------------------------------cC
Q 014995 274 -IITRTN-TSYFSYCLPSPYGS--TGYITFGKT---------------------------------------------DT 304 (415)
Q Consensus 274 -l~sQl~-~~~FSycL~~~~~~--~G~L~fG~t---------------------------------------------GT 304 (415)
+.+|.. ...||+||.+..+. .|.|+|||. ||
T Consensus 143 ~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGT 222 (330)
T 1yg9_A 143 NFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVAPAGTQAIIDTSK 222 (330)
T ss_dssp HHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEECTTCEEEECTTC
T ss_pred HHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEcCCCcEEEEecCC
Confidence 334422 22399999876332 799999983 33
Q ss_pred h-----hhHHHHHHHHHhhccccCCCCCCCccee-eccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCCeEEE-EEE
Q 014995 305 V-----NTLRSAFHKRMKKYKKAKGLEDLLDTCY-DLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCL-GFA 377 (415)
Q Consensus 305 v-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy-~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~Cl-a~~ 377 (415)
. ..+.+++.+++....... . +..| .++|.....+|+|+|+| ||++++|++++|+++. ...|+ +|+
T Consensus 223 s~~~lP~~~~~~l~~~~~~~~~~~---g--~~~~~~~~C~~~~~~p~i~f~f-gg~~~~l~~~~y~~~~--~~~C~~~i~ 294 (330)
T 1yg9_A 223 AIIVGPKAYVNPINEAIGCVVEKT---T--TRRICKLDCSKIPSLPDVTFVI-NGRNFNISSQYYIQQN--GNLCYSGFQ 294 (330)
T ss_dssp SSEEEEHHHHHHHHHHHTCEEEEC---S--SCEEEEECGGGGGGSCCEEEEE-TTEEEEECHHHHEEEE--TTEEEESEE
T ss_pred ccccCCHHHHHHHHHHhCCcccCC---C--ceEEEEEECCCccccCcEEEEE-CCEEEEECHHHhcccC--CCcEEEEEE
Confidence 3 444555555553321111 1 1245 67777666789999999 7899999999999987 56898 788
Q ss_pred ecCCCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 378 TYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 378 ~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
+.+ ....||||+.|||++|+|||++++|||||+++
T Consensus 295 ~~~-~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 295 PCG-HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EET-TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eCC-CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 753 34579999999999999999999999999864
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=8e-41 Score=337.15 Aligned_cols=253 Identities=22% Similarity=0.333 Sum_probs=190.7
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+..|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+.+.
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~---------------------- 65 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG---------------------- 65 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE----------------------
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC----------------------
Confidence 47899999999999999999999999999999999766 3789999999999864
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCce------------
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVS------------ 273 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~S------------ 273 (415)
|.|.+.|+||+ ++|++++|+|+|++.. .+. ..+.|+|.....+.| ...+||||||++.++
T Consensus 66 ~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~ 140 (383)
T 2ewy_A 66 FDVTVKYTQGS-WTGFVGEDLVTIPKGF---NTS-FLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDS 140 (383)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEEETTTE---EEE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred ceEEEEECCcE-EEEEEEEEEEEECCCc---cce-eEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHH
Confidence 78999999998 5899999999998643 111 146789987766655 257999999998764
Q ss_pred eecccccc-eEEEEcCC-------CCCCceEEEECCC-------------------------------------------
Q 014995 274 IITRTNTS-YFSYCLPS-------PYGSTGYITFGKT------------------------------------------- 302 (415)
Q Consensus 274 l~sQl~~~-~FSycL~~-------~~~~~G~L~fG~t------------------------------------------- 302 (415)
+++|...+ .||+||.. .....|.|+|||.
T Consensus 141 l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~ 220 (383)
T 2ewy_A 141 LVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNA 220 (383)
T ss_dssp HHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTS
T ss_pred HHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCC
Confidence 44565543 39999853 1235799999982
Q ss_pred -------cCh-----hhHHHHHHHHHhhccccCCC-----CCCCcceeeccCCcccccceEEEEEcCC-----eEEEecC
Q 014995 303 -------DTV-----NTLRSAFHKRMKKYKKAKGL-----EDLLDTCYDLSAYETVVVPKIAIHFLGG-----VDLELDV 360 (415)
Q Consensus 303 -------GTv-----~~l~~af~~~~~~~~~~~~~-----~~~~d~Cy~~~~~~~~~~P~i~f~F~gG-----a~~~l~~ 360 (415)
||. ..+.+++.+++......... ......|+.........+|+|+|+|.|+ .+++|++
T Consensus 221 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~ 300 (383)
T 2ewy_A 221 DKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILP 300 (383)
T ss_dssp SCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECH
T ss_pred ccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEECh
Confidence 222 33344444444432111110 0123578876654445789999999764 3799999
Q ss_pred CCeEEEeC---CCeEEEEE--EecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 361 RGTLVVAS---VSQVCLGF--ATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 361 ~~~l~~~~---~~~~Cla~--~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
++|+++.. .+..|++| .+. ...||||+.|||++|+|||++++|||||+++|+
T Consensus 301 ~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 301 QLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp HHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred HHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 99998863 35689864 432 346999999999999999999999999999994
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.1e-40 Score=329.22 Aligned_cols=246 Identities=19% Similarity=0.289 Sum_probs=190.8
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+.+|+++|.|| +|++.|+|||||+++||+|.+|..|..+.++.|||++|+ ++.. +
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~-----------------~----- 68 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKID-----------------G----- 68 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEE-----------------E-----
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccC-----------------C-----
Confidence 48999999999 899999999999999999999998655667899999998 5432 2
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCceee----------
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVSII---------- 275 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~Sl~---------- 275 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++...+.| ...+||||||++.++.+
T Consensus 69 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~----v~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 142 (323)
T 1izd_A 69 ATWSISYGDGSSASGDVYKDKVTVGGVS----YD--SQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFD 142 (323)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred CeEEEEcCCCCeEEEEEEEEEEEECCEE----EC--ceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHH
Confidence 8899999999989999999999998765 77 99999999877643 36899999999877653
Q ss_pred ---cccccceEEEEcCCCCCCceEEEECCC---------------------------------------------cCh-h
Q 014995 276 ---TRTNTSYFSYCLPSPYGSTGYITFGKT---------------------------------------------DTV-N 306 (415)
Q Consensus 276 ---sQl~~~~FSycL~~~~~~~G~L~fG~t---------------------------------------------GTv-~ 306 (415)
+|+....||+||.+. ..|.|+|||. ||. .
T Consensus 143 ~l~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~ 220 (323)
T 1izd_A 143 NVKSSLSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLL 220 (323)
T ss_dssp HHGGGSSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETTEEECCCEEEEECTTCCSE
T ss_pred HHHHhccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECCcccCCCceEEEeCCCcce
Confidence 344334499999864 5799999983 222 1
Q ss_pred h-HHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCCCeEEEE-EEecCCCCC
Q 014995 307 T-LRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCLG-FATYPPDPN 384 (415)
Q Consensus 307 ~-l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~~~~Cla-~~~~~~~~~ 384 (415)
. ..+.+.+..+.++.+.. .....-|.++|. ..+|+|+|+| ||++++||+++|++.......|++ |++.. ..+
T Consensus 221 ~lp~~~~~~i~~~i~ga~~--~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~C~~~i~~~~-~~~ 294 (323)
T 1izd_A 221 LLDDSIVDAYYEQVNGASY--DSSQGGYVFPSS--ASLPDFSVTI-GDYTATVPGEYISFADVGNGQTFGGIQSNS-GIG 294 (323)
T ss_dssp EECHHHHHHHHTTSTTCEE--ETTTTEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEECSTTEEEESEEECT-TTS
T ss_pred eCCHHHHHHHHHhCCCcEE--cCcCCEEEEECC--CCCceEEEEE-CCEEEecCHHHeEEecCCCCeEEEEEEcCC-CCC
Confidence 1 12223333222221110 111223556675 3689999999 789999999999988755678985 87653 346
Q ss_pred ceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 385 SITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 385 ~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
.||||+.|||++|+|||++++|||||+++
T Consensus 295 ~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 295 FSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 79999999999999999999999999864
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.4e-40 Score=335.18 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=189.8
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+..|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+.+.
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~---------------------- 73 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR---------------------- 73 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE----------------------
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC----------------------
Confidence 47899999999999999999999999999999998655 4789999999999864
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecc-cCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCce-----------
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQE-ANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVS----------- 273 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~-~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~S----------- 273 (415)
|.|.+.|+||+. +|.+++|+|+|++ .. ++ ..+.|+|.....+.| ...+||||||+..++
T Consensus 74 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~----~~-~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 147 (395)
T 2qp8_A 74 KGVYVPYTQGKW-EGELGTDLVSIPHGPN----VT-VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFD 147 (395)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSCS----CE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred ceEEEEECCcEE-EEEEEeEEEEECCCCC----ce-EEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHH
Confidence 789999999984 8999999999983 33 32 036788887665555 368999999998764
Q ss_pred -eecccccc-eEEEEcCCC----------CCCceEEEECCC---------------------------------------
Q 014995 274 -IITRTNTS-YFSYCLPSP----------YGSTGYITFGKT--------------------------------------- 302 (415)
Q Consensus 274 -l~sQl~~~-~FSycL~~~----------~~~~G~L~fG~t--------------------------------------- 302 (415)
|++|.... .||+||.+. ....|.|+|||.
T Consensus 148 ~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~ 227 (395)
T 2qp8_A 148 SLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCK 227 (395)
T ss_dssp HHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGG
T ss_pred HHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCcc
Confidence 34454433 399999753 125799999982
Q ss_pred -----------cCh-----hhHHHHHHHHHhhccccCCC-----CCCCcceeeccCCcccccceEEEEEcCCe-----EE
Q 014995 303 -----------DTV-----NTLRSAFHKRMKKYKKAKGL-----EDLLDTCYDLSAYETVVVPKIAIHFLGGV-----DL 356 (415)
Q Consensus 303 -----------GTv-----~~l~~af~~~~~~~~~~~~~-----~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa-----~~ 356 (415)
||. ..+.+++.+++......... ......|+.........+|+|+|+|.|++ ++
T Consensus 228 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 307 (395)
T 2qp8_A 228 EYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 307 (395)
T ss_dssp GGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred ccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEE
Confidence 222 33334444444321111110 01235798776555567999999997654 79
Q ss_pred EecCCCeEEEeCC----CeEEEE--EEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 357 ELDVRGTLVVASV----SQVCLG--FATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 357 ~l~~~~~l~~~~~----~~~Cla--~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
+|++++|+++... ...|++ +.+. ...||||+.|||++|+|||++++|||||+++|+
T Consensus 308 ~l~p~~yi~~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 369 (395)
T 2qp8_A 308 TILPQQYLRPVEDVATSQDDCYKFAISQS---STGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 369 (395)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred EECHHHhEeecccCCCCCceEEEEEecCC---CCcEEEChHHhCCeeEEEECCCCEEEEEeccCC
Confidence 9999999988632 358974 4432 356999999999999999999999999999995
No 28
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.4e-40 Score=326.94 Aligned_cols=246 Identities=20% Similarity=0.282 Sum_probs=189.0
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+.+|+++|.|| +|++.|+|||||+++||+|.+|..|..+.++.|||++|+ ++.. +
T Consensus 13 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~-----------------~----- 67 (325)
T 1ibq_A 13 DEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLS-----------------G----- 67 (325)
T ss_dssp TSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECT-----------------T-----
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccC-----------------C-----
Confidence 48999999999 999999999999999999999998665667899999998 5431 2
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCceee---------c
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVSII---------T 276 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~Sl~---------s 276 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++...+.| ...+||||||+..++.. +
T Consensus 68 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~----v~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 141 (325)
T 1ibq_A 68 YSWDISYGDGSSASGDVYRDTVTVGGVT----TN--KQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFD 141 (325)
T ss_dssp CBEEEECSSSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred CEEEEEeCCCCEEEEEEEEeEEEECCEE----Ec--ceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHH
Confidence 8999999999989999999999998765 77 99999999876643 36899999999877642 3
Q ss_pred ccc----cceEEEEcCCCCCCceEEEECCC----------------------------------------------cCh-
Q 014995 277 RTN----TSYFSYCLPSPYGSTGYITFGKT----------------------------------------------DTV- 305 (415)
Q Consensus 277 Ql~----~~~FSycL~~~~~~~G~L~fG~t----------------------------------------------GTv- 305 (415)
|+. ...||+||.+. ..|.|+|||. ||.
T Consensus 142 ~l~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~ 219 (325)
T 1ibq_A 142 TVKSQLDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTL 219 (325)
T ss_dssp HHGGGSSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCS
T ss_pred HHHHhcCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCc
Confidence 333 33499999863 4799999983 222
Q ss_pred -hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEe-C-CCeEEEE-EEecCC
Q 014995 306 -NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVA-S-VSQVCLG-FATYPP 381 (415)
Q Consensus 306 -~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~-~-~~~~Cla-~~~~~~ 381 (415)
....+.+.+..+.++.+.. ...+.-|.++|. ..+|+|+|+| ||++++||+++|++.. + ....|++ |++..
T Consensus 220 ~~lP~~~~~~i~~~i~~a~~--~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~- 293 (325)
T 1ibq_A 220 ILLDDEIVSAYYEQVSGAQE--SYEAGGYVFSCS--TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS- 293 (325)
T ss_dssp EEECHHHHHHHHTTSTTCBC--CSSSSSCEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEECT-
T ss_pred EeCCHHHHHHHHHhCCCceE--cCcCCeEEEEcC--CCCCcEEEEE-CCEEEEECHHHhcccccCCCCCeEEEEEEcCC-
Confidence 1122233333333322111 001112445565 3589999999 7899999999999876 3 3478984 77653
Q ss_pred CCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 382 DPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 382 ~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
..+.||||+.|||++|+|||++++|||||+++
T Consensus 294 ~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 294 GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 34679999999999999999999999999874
No 29
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.3e-40 Score=328.50 Aligned_cols=246 Identities=21% Similarity=0.283 Sum_probs=190.5
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+.+|+++|.|| +|++.|+|||||+++||+|.+|..|..+.++.|||++|+ ++.. +
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~-----------------~----- 68 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELS-----------------G----- 68 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEE-----------------E-----
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccC-----------------C-----
Confidence 48999999999 999999999999999999999998665667999999998 5532 2
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCceee----------
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVSII---------- 275 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~Sl~---------- 275 (415)
|.|.+.|+||+.+.|.+++|+|+|++.. ++ ++.|||++...+.| ...+||||||++.++.+
T Consensus 69 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~----v~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~ 142 (323)
T 1bxo_A 69 YTWSISYGDGSSASGNVFTDSVTVGGVT----AH--GQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFD 142 (323)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTEE----EE--EEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHH
T ss_pred CeEEEEeCCCCeEEEEEEEEEEEECCEE----EC--cEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHH
Confidence 8999999999989999999999998765 77 99999999876643 36899999999877653
Q ss_pred ---cccccceEEEEcCCCCCCceEEEECCC--------------------------------------------cCh-h-
Q 014995 276 ---TRTNTSYFSYCLPSPYGSTGYITFGKT--------------------------------------------DTV-N- 306 (415)
Q Consensus 276 ---sQl~~~~FSycL~~~~~~~G~L~fG~t--------------------------------------------GTv-~- 306 (415)
+|+....||+||.+. ..|.|+|||. ||. .
T Consensus 143 ~l~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~ 220 (323)
T 1bxo_A 143 TVKSSLAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLL 220 (323)
T ss_dssp HHGGGBSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEE
T ss_pred HHHHhcCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECCccCCCceEEEeCCCCcee
Confidence 343334499999863 5799999983 222 1
Q ss_pred hHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeC-CCeEEEE-EEecCCCCC
Q 014995 307 TLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS-VSQVCLG-FATYPPDPN 384 (415)
Q Consensus 307 ~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~-~~~~Cla-~~~~~~~~~ 384 (415)
...+.+.+..+.++.+.. .....-|.++|. ..+|+|+|+| ||++++||+++|++... ....|++ |++.. ..+
T Consensus 221 lP~~~~~~l~~~i~~a~~--~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~l~~~~~~~~~~~~~~~C~~~i~~~~-~~~ 294 (323)
T 1bxo_A 221 LDDSVVSQYYSQVSGAQQ--DSNAGGYVFDCS--TNLPDFSVSI-SGYTATVPGSLINYGPSGDGSTCLGGIQSNS-GIG 294 (323)
T ss_dssp ECHHHHHHHHTTSTTCEE--ETTTTEEEECTT--CCCCCEEEEE-TTEEEEECHHHHEEEECSSSSCEEESEEECT-TCS
T ss_pred CCHHHHHHHHHhCCCceE--cCcCCEEEEECC--CCCceEEEEE-CCEEEEECHHHeEEeccCCCCeEEEEEECCC-CCC
Confidence 122233333333322110 111223556676 3689999999 78999999999998763 3468985 77653 346
Q ss_pred ceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 385 SITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 385 ~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
.||||+.|||++|+|||++++|||||+++
T Consensus 295 ~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 295 FSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 79999999999999999999999999874
No 30
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=3.4e-40 Score=340.19 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=192.4
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+.+|+++|.||||+|++.|+|||||+++||+|.+| |. .++.|||++|+||+...
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~--~~~~y~~~~SsT~~~~~---------------------- 126 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF--LHRYYQRQLSSTYRDLR---------------------- 126 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT--CSCCCCGGGCTTCEEEE----------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc--cCCcccCCCCCCcccCC----------------------
Confidence 36899999999999999999999999999999998 53 45899999999999864
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCceee----------
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVSII---------- 275 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~Sl~---------- 275 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. .+. .++.|+|.....+.| ...+||||||++.++..
T Consensus 127 ~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~---~~~-~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~ 201 (455)
T 3lpj_A 127 KGVYVPYTQGK-WEGELGTDLVSIPHGP---NVT-VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDS 201 (455)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEECTTSC---SCE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred ccEEEEeCCeE-EEEEEEEEEEEECCCc---cee-eEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHH
Confidence 78999999998 5999999999998532 122 036789988876655 36899999999877542
Q ss_pred --cccccc-eEEEEcCCC----------CCCceEEEECCC----------------------------------------
Q 014995 276 --TRTNTS-YFSYCLPSP----------YGSTGYITFGKT---------------------------------------- 302 (415)
Q Consensus 276 --sQl~~~-~FSycL~~~----------~~~~G~L~fG~t---------------------------------------- 302 (415)
+|.... .||+||.+. ....|.|+|||+
T Consensus 202 L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~ 281 (455)
T 3lpj_A 202 LVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKE 281 (455)
T ss_dssp HHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGG
T ss_pred HHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccc
Confidence 333332 399999753 235799999993
Q ss_pred ----------cCh-----hhHHHHHHHHHhhccccCCC-----CCCCcceeeccCCcccccceEEEEEcCCe-----EEE
Q 014995 303 ----------DTV-----NTLRSAFHKRMKKYKKAKGL-----EDLLDTCYDLSAYETVVVPKIAIHFLGGV-----DLE 357 (415)
Q Consensus 303 ----------GTv-----~~l~~af~~~~~~~~~~~~~-----~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa-----~~~ 357 (415)
||. ..+.+++.+++......... ......|+.........+|+|+|+|+|+. +++
T Consensus 282 ~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 361 (455)
T 3lpj_A 282 YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 361 (455)
T ss_dssp GGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred cCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEE
Confidence 222 33344444444332111100 12256799876655567999999997654 599
Q ss_pred ecCCCeEEEeCCC----eEEEEEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 358 LDVRGTLVVASVS----QVCLGFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 358 l~~~~~l~~~~~~----~~Cla~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
|++++|+++.... ..|++|.... ..+.||||+.|||++|+|||++++|||||+++|+
T Consensus 362 l~~~~yi~~~~~~~~~~~~C~~f~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 362 ILPQQYLRPVEDVATSQDDCYKFAISQ-SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp ECHHHHEEEECCTTCCSCEEEEECEEE-ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred ECHHHheEeccCCCCCCceEEEEeccC-CCCcEEEChHHhCCeEEEEECCCCEEEEEecccc
Confidence 9999999986432 5899754322 2357999999999999999999999999999994
No 31
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=5.8e-40 Score=337.61 Aligned_cols=255 Identities=20% Similarity=0.294 Sum_probs=198.0
Q ss_pred eeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC--cccCCCCCCCCCCCCCccccccCCCccccccc
Q 014995 119 TFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI--HCFQQRDPFFYASKSKTFFKIPCNSTSCRILR 196 (415)
Q Consensus 119 ~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~ 196 (415)
.+|+. +..+.+|+++|.||||||++.|++||||+++||+|.+|. .|.. .+.|||++|+||+...
T Consensus 128 ~~pL~--n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~--~~~ydps~SsT~~~~~---------- 193 (451)
T 3qvc_A 128 NVELK--DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES--KNHYDSSKSKTYEKDD---------- 193 (451)
T ss_dssp CCCGG--GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT--SCCBCGGGCTTCEEEE----------
T ss_pred cccee--ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC--CCCCCCCCCcccccCC----------
Confidence 34443 334589999999999999999999999999999999996 4854 5899999999999853
Q ss_pred cCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEc----CCCCC--CCCCcccccCCC
Q 014995 197 ESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINN----SSGDK--SGASGIMGLDRS 270 (415)
Q Consensus 197 ~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~----~~g~f--~~~~GIlGLG~~ 270 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. ++ +.|||++. ..+ | ...+||||||++
T Consensus 194 ------------~~f~i~YgdGs-~~G~~~~Dtv~igg~~------v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~ 252 (451)
T 3qvc_A 194 ------------TPVKLTSKAGT-ISGIFSKDLVTIGKLS------VP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWK 252 (451)
T ss_dssp ------------EEEEEECSSEE-EEEEEEEEEEEETTEE------EE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSB
T ss_pred ------------CEEEEEECCCE-EEEEEEEEEEEECCEE------EE-EEEEEEEeccccCCC-ccCCCCCEEEecCCC
Confidence 78999999998 9999999999998644 44 99999998 666 4 368999999998
Q ss_pred Cce------eecccccc------eEEEEcCCCCCCceEEEECCC------------------------------------
Q 014995 271 PVS------IITRTNTS------YFSYCLPSPYGSTGYITFGKT------------------------------------ 302 (415)
Q Consensus 271 ~~S------l~sQl~~~------~FSycL~~~~~~~G~L~fG~t------------------------------------ 302 (415)
.++ ++.|+..+ .||+||.+.....|.|+|||.
T Consensus 253 ~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~I~Vgg~~~~~~ 332 (451)
T 3qvc_A 253 DLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKA 332 (451)
T ss_dssp CSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEEEEETTEEEEEE
T ss_pred cccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEEEEECCccCCCc
Confidence 754 23333332 399999987666899999983
Q ss_pred ------cCh--hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCCeEEEeC--CCeE
Q 014995 303 ------DTV--NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS--VSQV 372 (415)
Q Consensus 303 ------GTv--~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~--~~~~ 372 (415)
||. ....+.+.+..+.++... .....+|.++|. ...+|+|+|+| +|++++||+++|+++.. ....
T Consensus 333 ~aiiDSGTt~i~lP~~~~~~i~~~i~a~~---~~~~g~y~v~C~-~~~~P~itf~f-gg~~i~lp~~~yi~~~~~~~~~~ 407 (451)
T 3qvc_A 333 NVILDSATSVITVPTEFFNQFVESASVFK---VPFLSLYVTTCG-NTKLPTLEYRS-PNKVYTLEPKQYLEPLENIFSAL 407 (451)
T ss_dssp EEEECTTBSSEEECHHHHHHHHTTTTCEE---CTTSSCEEEETT-CTTCCCEEEEE-TTEEEEECHHHHEEECTTTSTTE
T ss_pred eEEEeCCCccccCCHHHHHHHHHHcCCee---cCCCCeEEeeCC-cCcCCcEEEEE-CCEEEEEcHHHheeecccCCCCe
Confidence 222 112233333333332211 112345777887 56789999999 68999999999999864 3568
Q ss_pred EE-EEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCC
Q 014995 373 CL-GFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGN 413 (415)
Q Consensus 373 Cl-a~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~ 413 (415)
|+ +|++.......||||++|||++|+|||.+++|||||+++
T Consensus 408 C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 408 CMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 97 788764225689999999999999999999999999874
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1e-39 Score=331.15 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=189.2
Q ss_pred CceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCCC
Q 014995 129 ADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRESFPFGNCNSKE 208 (415)
Q Consensus 129 ~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~C~~~~ 208 (415)
+.+|+++|.||||+|++.|+|||||+++||+|.+| |. .++.|||++|+||+...
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~--~~~~y~~~~SsT~~~~~---------------------- 80 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF--LHRYYQRQLSSTYRDLR---------------------- 80 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT--CSCCCCGGGCTTCEEEE----------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc--ccCCcCcccCcccccCC----------------------
Confidence 37899999999999999999999999999999998 42 35899999999999864
Q ss_pred CceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCC---CCCCcccccCCCCceee----------
Q 014995 209 CPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDK---SGASGIMGLDRSPVSII---------- 275 (415)
Q Consensus 209 c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f---~~~~GIlGLG~~~~Sl~---------- 275 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. .+. ..+.|+|.....+.| ...+||||||+..++..
T Consensus 81 ~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~---~~~-~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~ 155 (402)
T 3vf3_A 81 KGVYVPYTQGK-WEGELGTDLVSIPHGP---NVT-VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDS 155 (402)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEECTTSC---SCE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred CEEEEEECcEE-EEEEEEEEEEEECCcc---ccc-eeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHH
Confidence 78999999998 6999999999998532 122 035588888766654 36899999999876543
Q ss_pred --cccccc-eEEEEcCCC----------CCCceEEEECCC----------------------------------------
Q 014995 276 --TRTNTS-YFSYCLPSP----------YGSTGYITFGKT---------------------------------------- 302 (415)
Q Consensus 276 --sQl~~~-~FSycL~~~----------~~~~G~L~fG~t---------------------------------------- 302 (415)
+|.... .||+||.+. ....|.|+|||+
T Consensus 156 L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~ 235 (402)
T 3vf3_A 156 LVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKE 235 (402)
T ss_dssp HHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGG
T ss_pred HHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccc
Confidence 333332 399999742 235799999993
Q ss_pred ----------cCh-----hhHHHHHHHHHhhccc---cCCC--CCCCcceeeccCCcccccceEEEEEcCCe-----EEE
Q 014995 303 ----------DTV-----NTLRSAFHKRMKKYKK---AKGL--EDLLDTCYDLSAYETVVVPKIAIHFLGGV-----DLE 357 (415)
Q Consensus 303 ----------GTv-----~~l~~af~~~~~~~~~---~~~~--~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa-----~~~ 357 (415)
||. ..+.+++.+++..... .... ......|+.........+|+|+|+|.|+. +++
T Consensus 236 ~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 315 (402)
T 3vf3_A 236 YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 315 (402)
T ss_dssp GGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred cCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEE
Confidence 222 3344444444433211 1110 02256899877655567999999997654 599
Q ss_pred ecCCCeEEEeCCC----eEEEEEEecCCCCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 358 LDVRGTLVVASVS----QVCLGFATYPPDPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 358 l~~~~~l~~~~~~----~~Cla~~~~~~~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
|++++|+++.... ..|++|.... ....||||+.|||++|+|||++++|||||+++|+
T Consensus 316 l~~~~yi~~~~~~~~~~~~C~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 316 ILPQQYLRPVEDVATSQDDCYKFAISQ-SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 376 (402)
T ss_dssp ECHHHHEEECCCGGGTTEEEEEECEEE-ESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTC
T ss_pred ECHHHheehhccCCCCCceEEEEeccC-CCCcEEEChHHhCCeEEEEECCCCEEEEEecccC
Confidence 9999999986432 4898653322 2356999999999999999999999999999995
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.8e-39 Score=320.01 Aligned_cols=245 Identities=20% Similarity=0.295 Sum_probs=185.6
Q ss_pred eeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCCcccCCCCCCCCCCCCCccccccCCCccccccccC
Q 014995 119 TFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCIHCFQQRDPFFYASKSKTFFKIPCNSTSCRILRES 198 (415)
Q Consensus 119 ~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~ 198 (415)
++|+... +.+|+++|.||||+|++.|+|||||+++||+|. +.|||++|+++..
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~~-------------- 56 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSATS-------------- 56 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEEE--------------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCccccC--------------
Confidence 4566532 468999999999999999999999999999875 4799999886532
Q ss_pred CCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCCCCCCCCcccccCCCCceee---
Q 014995 199 FPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSGDKSGASGIMGLDRSPVSII--- 275 (415)
Q Consensus 199 ~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g~f~~~~GIlGLG~~~~Sl~--- 275 (415)
|.|.+.|+||+ ++|.+++|+|+|++.. ++ ++.|||++...+ |...+||||||+..+++.
T Consensus 57 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~----v~--~~~fg~~~~~~~-~~~~~GilGLg~~~~s~~~~~ 118 (340)
T 1wkr_A 57 ----------DKVSVTYGSGS-FSGTEYTDTVTLGSLT----IP--KQSIGVASRDSG-FDGVDGILGVGPVDLTVGTLS 118 (340)
T ss_dssp ----------EEEEEECSSCE-EEEEEEEEEEEETTEE----EE--EEEEEEEEEEES-CTTCSEEEECSCGGGGTTSEE
T ss_pred ----------ceEEEEECCcE-EEEEEEEEEEEECCEE----Ec--ceEEEEEEccCC-CcCCCcEEECCcccccccccc
Confidence 88999999998 8899999999998755 77 999999998776 567999999999877652
Q ss_pred -----------ccccc------ceEEEEcCCCC---CCceEEEECCC---------------------------------
Q 014995 276 -----------TRTNT------SYFSYCLPSPY---GSTGYITFGKT--------------------------------- 302 (415)
Q Consensus 276 -----------sQl~~------~~FSycL~~~~---~~~G~L~fG~t--------------------------------- 302 (415)
.++.. ..||+||.+.. ...|.|+|||.
T Consensus 119 ~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~~~i~v~ 198 (340)
T 1wkr_A 119 PHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGINQSIRYG 198 (340)
T ss_dssp SCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEEEEEEET
T ss_pred ccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEEeeEEEC
Confidence 22221 23999998642 24799999983
Q ss_pred ---------------cCh-----hhHHHHHHHHHhhccccCCCCCCCcceeeccCCcccccceEEEEEcCCeEEEecCCC
Q 014995 303 ---------------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTCYDLSAYETVVVPKIAIHFLGGVDLELDVRG 362 (415)
Q Consensus 303 ---------------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~Cy~~~~~~~~~~P~i~f~F~gGa~~~l~~~~ 362 (415)
||. ..+.+++.+++... . .....+|.++|.....+|.|+|+| +|++++|++++
T Consensus 199 ~~~~l~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~-----~-~~~~g~~~~~C~~~~~~p~i~f~f-~g~~~~i~~~~ 271 (340)
T 1wkr_A 199 SSTSILSSTAGIVDTGTTLTLIASDAFAKYKKATGAV-----A-DNNTGLLRLTTAQYANLQSLFFTI-GGQTFELTANA 271 (340)
T ss_dssp TTEEEEEEEEEEECTTBCSEEECHHHHHHHHHHHTCE-----E-CTTTSSEEECHHHHHTCCCEEEEE-TTEEEEECTGG
T ss_pred CCeEccCCCeEEEeCCcccccCCHHHHHHHHHhhCCE-----E-cCCCCeEEeeccccccCCcEEEEE-CCEEEEEcHHH
Confidence 111 22233333333211 0 111234667776556789999999 68999999999
Q ss_pred eEEEeC-------CCeEEE-EEEecCC---CCCceeechhhhcceEEEEECCCCEEEEeeCCCC
Q 014995 363 TLVVAS-------VSQVCL-GFATYPP---DPNSITLGNVQQRGHEVHYDVAGRRLGFGPGNCS 415 (415)
Q Consensus 363 ~l~~~~-------~~~~Cl-a~~~~~~---~~~~~IlG~~~~~~~~vvfD~~~~~iGFa~~~C~ 415 (415)
|+++.. ....|+ +|.+... .+..||||+.|||++|+|||++++|||||+++|+
T Consensus 272 yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 272 QIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp GBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTT
T ss_pred hccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCC
Confidence 997642 124675 7876421 2346999999999999999999999999999985
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.96 E-value=1.2e-28 Score=233.18 Aligned_cols=151 Identities=25% Similarity=0.392 Sum_probs=124.4
Q ss_pred eeeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC---cccCCCCCCCCCCCCCccccccCCCcccccc
Q 014995 119 TFPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI---HCFQQRDPFFYASKSKTFFKIPCNSTSCRIL 195 (415)
Q Consensus 119 ~~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~---~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~ 195 (415)
.+|+. +..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+...
T Consensus 4 ~~~l~--n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~--~~~y~~~~SsT~~~~~--------- 70 (239)
T 1b5f_A 4 VVALT--NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA--HSMYESSDSSTYKENG--------- 70 (239)
T ss_dssp EEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT--SCCBCGGGCTTCEEEE---------
T ss_pred eeeee--ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC--CCCCCCccCCCeeeCC---------
Confidence 34554 334589999999999999999999999999999999996 4875 4799999999998863
Q ss_pred ccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecccCCCceeeecCeEEEEEEcCCC-CC--CCCCcccccCCCCc
Q 014995 196 RESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQEANSNGYFTRYPFLLGCINNSSG-DK--SGASGIMGLDRSPV 272 (415)
Q Consensus 196 ~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~~~~~~~v~~~~~~FGc~~~~~g-~f--~~~~GIlGLG~~~~ 272 (415)
|.|.+.|+||+ +.|.+++|+|+|++.. ++ ++.|||++...+ .| ...+||||||+..+
T Consensus 71 -------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~----v~--~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~ 130 (239)
T 1b5f_A 71 -------------TFGAIIYGTGS-ITGFFSQDSVTIGDLV----VK--EQDFIEATDEADNVFLHRLFDGILGLSFQTI 130 (239)
T ss_dssp -------------EEEEEECSSCE-EEEEEEEEEEEETTEE----EE--EEEEEEEEEECHHHHTTCSCCEEEECSCCSS
T ss_pred -------------cEEEEEECCCc-EEEEEEEEEEEECCcE----Ec--cEEEEEEEeccCccccccCcceEEecCcccc
Confidence 78999999997 7899999999998765 77 999999998765 23 36899999999988
Q ss_pred e------eeccccc--ceEEEEcCCCC--CCceEEEECCC
Q 014995 273 S------IITRTNT--SYFSYCLPSPY--GSTGYITFGKT 302 (415)
Q Consensus 273 S------l~sQl~~--~~FSycL~~~~--~~~G~L~fG~t 302 (415)
+ +++|... ..||+||++.. ...|.|+||+.
T Consensus 131 s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 170 (239)
T 1b5f_A 131 SVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGL 170 (239)
T ss_dssp SCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSC
T ss_pred ccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCc
Confidence 7 4455332 23999998753 35799999963
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.89 E-value=2.5e-22 Score=189.39 Aligned_cols=163 Identities=20% Similarity=0.285 Sum_probs=120.7
Q ss_pred eeecCeEEEEEEcCCCC-C--CCCCcccccCCCCceee------ccccc------ceEEEEcCCCCCC--ceEEEECCC-
Q 014995 241 FTRYPFLLGCINNSSGD-K--SGASGIMGLDRSPVSII------TRTNT------SYFSYCLPSPYGS--TGYITFGKT- 302 (415)
Q Consensus 241 v~~~~~~FGc~~~~~g~-f--~~~~GIlGLG~~~~Sl~------sQl~~------~~FSycL~~~~~~--~G~L~fG~t- 302 (415)
++ ++.|||++...+. | ...+||||||++.++.. .|+.. ..||+||.+.... .|.|+|||.
T Consensus 5 v~--~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 5 VE--RQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EE--EEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred EC--CeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 56 9999999998773 4 36899999999877532 23322 2399999886543 799999983
Q ss_pred ---------------------------------------------cCh-----hhHHHHHHHHHhhccccCCCCCCCcce
Q 014995 303 ---------------------------------------------DTV-----NTLRSAFHKRMKKYKKAKGLEDLLDTC 332 (415)
Q Consensus 303 ---------------------------------------------GTv-----~~l~~af~~~~~~~~~~~~~~~~~d~C 332 (415)
||. ..+.+++.+++...... +..
T Consensus 83 ~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~g~ 155 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLI-------QGE 155 (241)
T ss_dssp GGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-------TTE
T ss_pred HHHcCCceEEEECccccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeecc-------CCc
Confidence 232 33444555554322111 123
Q ss_pred eeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCC--CeEEE-EEEecCC---CCCceeechhhhcceEEEEECCCCE
Q 014995 333 YDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASV--SQVCL-GFATYPP---DPNSITLGNVQQRGHEVHYDVAGRR 406 (415)
Q Consensus 333 y~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~--~~~Cl-a~~~~~~---~~~~~IlG~~~~~~~~vvfD~~~~~ 406 (415)
|.++|.....+|+|+|+| +|++++|++++|+++... ...|+ +|++... ....||||+.|||++|+|||++++|
T Consensus 156 ~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~ 234 (241)
T 1lya_B 156 YMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNR 234 (241)
T ss_dssp EEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTE
T ss_pred EEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEECCCCE
Confidence 566676656789999999 789999999999998742 46898 6887531 3468999999999999999999999
Q ss_pred EEEeeCC
Q 014995 407 LGFGPGN 413 (415)
Q Consensus 407 iGFa~~~ 413 (415)
||||+++
T Consensus 235 igfA~~~ 241 (241)
T 1lya_B 235 VGFAEAA 241 (241)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=3.8e-23 Score=168.54 Aligned_cols=88 Identities=27% Similarity=0.557 Sum_probs=77.9
Q ss_pred eeeecCCCCCceEEEEEEeCCCCcEEEEEEECCCCceeeecCCCC----cccCCCCCCCCCCCCCccccccCCCcccccc
Q 014995 120 FPANINDTVADEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCKPCI----HCFQQRDPFFYASKSKTFFKIPCNSTSCRIL 195 (415)
Q Consensus 120 ~p~~~~~~~~~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~C~----~C~~~~~~~fdps~SsT~~~v~C~s~~C~~~ 195 (415)
+|+. +..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. ++.|||++|+||+...
T Consensus 5 ~~l~--n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~--~~~y~p~~SsT~~~~~--------- 71 (97)
T 1lya_A 5 EVLK--NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI--HHKYNSDKSSTYVKNG--------- 71 (97)
T ss_dssp EEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT--SCCBCGGGCTTCEEEE---------
T ss_pred EeeE--ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC--CCCCCchhCCCceeCC---------
Confidence 4443 334589999999999999999999999999999999997 4865 4899999999999863
Q ss_pred ccCCCCCCCCCCCCceeEecCCCCeEeEEEEEEEEEecc
Q 014995 196 RESFPFGNCNSKECPFNIQYADGSGSGGFWATDRITIQE 234 (415)
Q Consensus 196 ~~~~~~~~C~~~~c~y~i~Ygdgs~~~G~l~~Dtltl~~ 234 (415)
|.|.+.|+||+ +.|.+++|+|+|++
T Consensus 72 -------------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 -------------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -------------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -------------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 78999999998 89999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.63 E-value=5.3e-16 Score=123.47 Aligned_cols=80 Identities=18% Similarity=0.321 Sum_probs=67.2
Q ss_pred eeccCCcccccceEEEEEcCCeEEEecCCCeEEEeCC--CeEEE-EEEecC--CCCCceeechhhhcceEEEEECCCCEE
Q 014995 333 YDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASV--SQVCL-GFATYP--PDPNSITLGNVQQRGHEVHYDVAGRRL 407 (415)
Q Consensus 333 y~~~~~~~~~~P~i~f~F~gGa~~~l~~~~~l~~~~~--~~~Cl-a~~~~~--~~~~~~IlG~~~~~~~~vvfD~~~~~i 407 (415)
|.++|.....+|+|+|+| ||++++|++++|++.... ...|+ +|++.. .....||||++|||++|+|||++++||
T Consensus 3 y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ri 81 (87)
T 1b5f_B 3 LQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLV 81 (87)
T ss_dssp CEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEE
T ss_pred EEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEE
Confidence 556777666799999999 789999999999988642 46898 788753 234589999999999999999999999
Q ss_pred EEeeCC
Q 014995 408 GFGPGN 413 (415)
Q Consensus 408 GFa~~~ 413 (415)
|||+++
T Consensus 82 GfA~~~ 87 (87)
T 1b5f_B 82 GFAEAA 87 (87)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999864
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=83.19 E-value=1.1 Score=35.96 Aligned_cols=26 Identities=31% Similarity=0.401 Sum_probs=23.5
Q ss_pred EEEEEEeCCCCcEEEEEEECCCCceeee
Q 014995 132 YYIVVAIGEPKQYVSLLLDTGSDVTWTQ 159 (415)
Q Consensus 132 Y~v~v~iGTP~q~~~liiDTGSd~~Wv~ 159 (415)
-+++|.|| .|.+.+++|||.|++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 36889999 799999999999999997
No 39
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=82.66 E-value=1.1 Score=35.55 Aligned_cols=27 Identities=37% Similarity=0.463 Sum_probs=23.9
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceeeecC
Q 014995 133 YIVVAIGEPKQYVSLLLDTGSDVTWTQCK 161 (415)
Q Consensus 133 ~v~v~iGTP~q~~~liiDTGSd~~Wv~c~ 161 (415)
+++|.|| .|...+++|||.|++-+.-.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5789999 79999999999999999644
No 40
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=77.86 E-value=2 Score=34.08 Aligned_cols=27 Identities=33% Similarity=0.336 Sum_probs=23.8
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceeeecC
Q 014995 133 YIVVAIGEPKQYVSLLLDTGSDVTWTQCK 161 (415)
Q Consensus 133 ~v~v~iGTP~q~~~liiDTGSd~~Wv~c~ 161 (415)
++++.|| +|.+.+++|||.|++-+.-.
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 6789999 89999999999999999543
No 41
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=76.01 E-value=2.4 Score=34.46 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=25.7
Q ss_pred EEEEEeC---CCCcEEEEEEECCCCceeeecCCC
Q 014995 133 YIVVAIG---EPKQYVSLLLDTGSDVTWTQCKPC 163 (415)
Q Consensus 133 ~v~v~iG---TP~q~~~liiDTGSd~~Wv~c~~C 163 (415)
.++|.|| +|+|....++|||-|++-+.-..+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4666666 789999999999999999986544
No 42
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=73.04 E-value=3 Score=34.05 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=22.2
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceeeec
Q 014995 133 YIVVAIGEPKQYVSLLLDTGSDVTWTQC 160 (415)
Q Consensus 133 ~v~v~iGTP~q~~~liiDTGSd~~Wv~c 160 (415)
++ |.|| .|.+.+++|||.|++-+.-
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 45 9999 7999999999999999874
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=68.90 E-value=3.8 Score=34.25 Aligned_cols=28 Identities=29% Similarity=0.389 Sum_probs=25.6
Q ss_pred ceEEEEEEeCCCCcEEEEEEECCCCceeee
Q 014995 130 DEYYIVVAIGEPKQYVSLLLDTGSDVTWTQ 159 (415)
Q Consensus 130 ~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~ 159 (415)
+.+++++.|+ ++++.+++|||++.+-+.
T Consensus 25 ~~~~v~v~In--G~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 25 PMLYINIEIN--NYPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred ceEEEEEEEC--CEEEEEEEECCCCccccC
Confidence 7789999998 789999999999998885
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=66.80 E-value=5.5 Score=32.36 Aligned_cols=28 Identities=21% Similarity=0.345 Sum_probs=24.4
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceeeecCC
Q 014995 133 YIVVAIGEPKQYVSLLLDTGSDVTWTQCKP 162 (415)
Q Consensus 133 ~v~v~iGTP~q~~~liiDTGSd~~Wv~c~~ 162 (415)
.+++.|| +|.+.+++|||-|++-+.-..
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5778999 799999999999999997554
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=57.43 E-value=8.2 Score=32.64 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=26.1
Q ss_pred ceEEEEEEeCCCCcEEEEEEECCCCceeeecC
Q 014995 130 DEYYIVVAIGEPKQYVSLLLDTGSDVTWTQCK 161 (415)
Q Consensus 130 ~~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~ 161 (415)
..|++++.|. .+++.+++|||+..+-+.-.
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 5789999998 79999999999999988543
No 46
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=51.40 E-value=11 Score=30.97 Aligned_cols=23 Identities=30% Similarity=0.499 Sum_probs=18.9
Q ss_pred eCCCCcEEEEEEECCCCceeeecCC
Q 014995 138 IGEPKQYVSLLLDTGSDVTWTQCKP 162 (415)
Q Consensus 138 iGTP~q~~~liiDTGSd~~Wv~c~~ 162 (415)
|| .|.+.+++|||-|++-+.-..
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 55 577899999999999997543
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=49.99 E-value=14 Score=30.71 Aligned_cols=29 Identities=31% Similarity=0.401 Sum_probs=24.3
Q ss_pred eEEEEEEeCCCCcEEEEEEECCCCceeeecC
Q 014995 131 EYYIVVAIGEPKQYVSLLLDTGSDVTWTQCK 161 (415)
Q Consensus 131 ~Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c~ 161 (415)
.-++++.|+ .|...+++|||.|.+-+.-.
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 346788998 79999999999999998643
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=48.87 E-value=14 Score=33.10 Aligned_cols=26 Identities=38% Similarity=0.484 Sum_probs=23.4
Q ss_pred EEEEEEeCCCCcEEEEEEECCCCceeee
Q 014995 132 YYIVVAIGEPKQYVSLLLDTGSDVTWTQ 159 (415)
Q Consensus 132 Y~v~v~iGTP~q~~~liiDTGSd~~Wv~ 159 (415)
-.++|.|| +|.+.+++|||.|++-+.
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIE 34 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEe
Confidence 36889999 799999999999999986
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=29.98 E-value=42 Score=29.95 Aligned_cols=27 Identities=37% Similarity=0.429 Sum_probs=23.7
Q ss_pred EEEEEEeCCCCcEEEEEEECCCCceeeec
Q 014995 132 YYIVVAIGEPKQYVSLLLDTGSDVTWTQC 160 (415)
Q Consensus 132 Y~v~v~iGTP~q~~~liiDTGSd~~Wv~c 160 (415)
=.+++.|| +|....++|||.|++-+.-
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 46889999 7999999999999999853
Done!