Query 014997
Match_columns 414
No_of_seqs 414 out of 3551
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 04:50:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fg2_P Putative rubredoxin red 100.0 7.8E-56 2.7E-60 437.9 44.0 372 3-399 26-400 (404)
2 3lxd_A FAD-dependent pyridine 100.0 5.3E-56 1.8E-60 440.6 42.8 370 3-396 34-408 (415)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 7.8E-56 2.7E-60 438.6 40.3 368 3-397 27-397 (410)
4 3klj_A NAD(FAD)-dependent dehy 100.0 2.3E-53 7.7E-58 416.8 30.6 349 2-402 31-383 (385)
5 1q1r_A Putidaredoxin reductase 100.0 2.3E-51 8E-56 408.9 41.4 376 3-401 29-411 (431)
6 2gqw_A Ferredoxin reductase; f 100.0 4.4E-51 1.5E-55 404.2 40.1 367 3-402 32-403 (408)
7 1m6i_A Programmed cell death p 100.0 4.3E-49 1.5E-53 398.8 28.6 379 2-388 35-480 (493)
8 1xhc_A NADH oxidase /nitrite r 100.0 2E-45 6.8E-50 358.5 30.7 332 4-381 31-363 (367)
9 4eqs_A Coenzyme A disulfide re 100.0 2.9E-45 1E-49 365.3 30.6 370 2-400 24-425 (437)
10 2cdu_A NADPH oxidase; flavoenz 100.0 3E-44 1E-48 360.0 26.9 380 2-404 24-436 (452)
11 2bc0_A NADH oxidase; flavoprot 100.0 1.1E-43 3.8E-48 359.3 28.7 381 2-406 60-483 (490)
12 3iwa_A FAD-dependent pyridine 100.0 3.8E-43 1.3E-47 353.9 31.1 386 2-403 27-449 (472)
13 3oc4_A Oxidoreductase, pyridin 100.0 6.8E-43 2.3E-47 350.1 29.2 373 2-399 26-426 (452)
14 1nhp_A NADH peroxidase; oxidor 100.0 4.5E-43 1.6E-47 350.9 25.4 379 2-405 24-436 (447)
15 2v3a_A Rubredoxin reductase; a 100.0 1.5E-41 5E-46 333.4 33.5 341 3-377 29-376 (384)
16 3kd9_A Coenzyme A disulfide re 100.0 4.3E-42 1.5E-46 344.1 29.1 373 2-400 27-429 (449)
17 3ntd_A FAD-dependent pyridine 100.0 9.4E-42 3.2E-46 351.3 32.0 364 2-388 25-438 (565)
18 3cgb_A Pyridine nucleotide-dis 100.0 6.4E-42 2.2E-46 345.5 29.4 378 2-404 60-472 (480)
19 3ics_A Coenzyme A-disulfide re 100.0 2.2E-38 7.7E-43 327.5 37.8 362 2-388 60-454 (588)
20 1zmd_A Dihydrolipoyl dehydroge 100.0 5.2E-37 1.8E-41 309.2 31.4 328 53-408 104-466 (474)
21 2qae_A Lipoamide, dihydrolipoy 100.0 7.2E-37 2.4E-41 307.8 31.1 325 54-409 101-462 (468)
22 1xdi_A RV3303C-LPDA; reductase 100.0 3.7E-37 1.3E-41 312.2 28.1 328 53-410 102-466 (499)
23 1mo9_A ORF3; nucleotide bindin 100.0 2.6E-36 8.9E-41 307.5 33.3 325 57-410 146-519 (523)
24 2a8x_A Dihydrolipoyl dehydroge 100.0 6.2E-37 2.1E-41 307.9 27.7 324 54-409 99-458 (464)
25 1ebd_A E3BD, dihydrolipoamide 100.0 1.3E-36 4.3E-41 304.9 29.2 322 54-408 99-454 (455)
26 1v59_A Dihydrolipoamide dehydr 100.0 6.6E-37 2.3E-41 308.8 26.8 327 54-409 104-472 (478)
27 1dxl_A Dihydrolipoamide dehydr 100.0 9.9E-37 3.4E-41 306.9 27.2 324 54-409 104-464 (470)
28 1zk7_A HGII, reductase, mercur 100.0 4.5E-36 1.5E-40 301.9 31.2 324 54-409 102-456 (467)
29 2hqm_A GR, grase, glutathione 100.0 7.1E-37 2.4E-41 308.5 25.1 323 55-406 114-472 (479)
30 1ojt_A Surface protein; redox- 100.0 8.3E-37 2.8E-41 308.3 24.1 324 54-409 103-471 (482)
31 2wpf_A Trypanothione reductase 100.0 4.5E-36 1.5E-40 303.6 28.8 318 56-406 117-476 (495)
32 2eq6_A Pyruvate dehydrogenase 100.0 1.3E-35 4.4E-40 298.2 30.6 322 54-410 101-456 (464)
33 1ges_A Glutathione reductase; 100.0 6.3E-36 2.2E-40 299.3 26.4 315 55-403 102-448 (450)
34 1onf_A GR, grase, glutathione 100.0 3.7E-36 1.3E-40 304.8 24.9 328 54-405 97-496 (500)
35 1fec_A Trypanothione reductase 100.0 5.1E-36 1.7E-40 303.0 25.5 318 56-406 113-472 (490)
36 3l8k_A Dihydrolipoyl dehydroge 100.0 1.6E-35 5.4E-40 297.7 24.9 323 56-408 99-457 (466)
37 2r9z_A Glutathione amide reduc 100.0 3.2E-35 1.1E-39 295.1 26.5 316 55-405 101-448 (463)
38 3lad_A Dihydrolipoamide dehydr 100.0 1.1E-34 3.6E-39 292.6 29.9 327 55-411 108-467 (476)
39 2yqu_A 2-oxoglutarate dehydrog 100.0 4.3E-35 1.5E-39 293.8 26.6 323 54-409 97-449 (455)
40 1lvl_A Dihydrolipoamide dehydr 100.0 7.9E-35 2.7E-39 292.0 27.7 320 54-410 104-453 (458)
41 3urh_A Dihydrolipoyl dehydroge 100.0 1.5E-34 5.1E-39 292.5 29.1 326 54-410 123-486 (491)
42 3dk9_A Grase, GR, glutathione 100.0 1.8E-34 6.3E-39 290.9 26.4 319 55-403 117-476 (478)
43 4b1b_A TRXR, thioredoxin reduc 100.0 1.1E-34 3.8E-39 294.5 24.9 324 55-409 149-525 (542)
44 4g6h_A Rotenone-insensitive NA 100.0 4.8E-35 1.6E-39 295.9 22.1 271 3-302 65-398 (502)
45 4dna_A Probable glutathione re 100.0 2.4E-34 8.2E-39 288.9 25.4 321 54-407 101-452 (463)
46 3dgh_A TRXR-1, thioredoxin red 100.0 2.1E-34 7.3E-39 290.8 24.8 321 56-406 118-476 (483)
47 3dgz_A Thioredoxin reductase 2 100.0 3E-34 1E-38 290.0 24.9 324 55-407 113-477 (488)
48 3ic9_A Dihydrolipoamide dehydr 100.0 3.9E-34 1.3E-38 289.3 25.5 318 60-410 111-468 (492)
49 3qfa_A Thioredoxin reductase 1 100.0 7.9E-34 2.7E-38 288.8 25.8 325 55-408 139-506 (519)
50 3o0h_A Glutathione reductase; 100.0 1.9E-33 6.4E-38 284.0 24.2 321 54-407 122-472 (484)
51 2x8g_A Thioredoxin glutathione 100.0 7.6E-33 2.6E-37 286.6 26.9 322 56-406 216-583 (598)
52 3hyw_A Sulfide-quinone reducta 100.0 5.9E-32 2E-36 268.9 17.1 278 2-302 26-330 (430)
53 3vrd_B FCCB subunit, flavocyto 100.0 1.9E-31 6.4E-36 262.9 19.2 273 2-302 26-321 (401)
54 3sx6_A Sulfide-quinone reducta 100.0 3.3E-31 1.1E-35 264.1 17.5 282 2-302 29-341 (437)
55 4gcm_A TRXR, thioredoxin reduc 100.0 6.2E-30 2.1E-34 243.4 24.1 246 35-302 51-303 (312)
56 3h8l_A NADH oxidase; membrane 100.0 2.7E-30 9.2E-35 255.4 20.5 267 3-303 27-334 (409)
57 3ab1_A Ferredoxin--NADP reduct 100.0 1.3E-30 4.5E-35 253.1 16.9 247 53-319 81-342 (360)
58 3f8d_A Thioredoxin reductase ( 100.0 7.6E-30 2.6E-34 243.1 21.0 229 51-302 75-314 (323)
59 2zbw_A Thioredoxin reductase; 100.0 2.1E-30 7.3E-35 248.8 17.2 230 53-303 72-315 (335)
60 3lzw_A Ferredoxin--NADP reduct 100.0 1.4E-30 4.6E-35 249.4 14.5 242 50-316 71-326 (332)
61 1fl2_A Alkyl hydroperoxide red 100.0 7.9E-29 2.7E-33 235.3 24.6 226 52-302 62-302 (310)
62 3fbs_A Oxidoreductase; structu 100.0 6.7E-30 2.3E-34 240.7 16.2 217 53-302 63-289 (297)
63 2q0l_A TRXR, thioredoxin reduc 100.0 7.3E-29 2.5E-33 235.6 22.2 225 53-302 66-306 (311)
64 4a5l_A Thioredoxin reductase; 100.0 1.5E-29 5.2E-34 240.6 16.0 247 35-301 54-308 (314)
65 2q7v_A Thioredoxin reductase; 100.0 2.6E-28 8.8E-33 233.5 24.2 225 52-302 71-309 (325)
66 3itj_A Thioredoxin reductase 1 100.0 4.2E-29 1.4E-33 239.6 17.8 227 50-302 88-332 (338)
67 1trb_A Thioredoxin reductase; 100.0 1.8E-28 6.2E-33 233.7 22.0 229 52-302 68-311 (320)
68 3cty_A Thioredoxin reductase; 100.0 3.1E-28 1.1E-32 232.2 23.1 225 52-302 78-313 (319)
69 3r9u_A Thioredoxin reductase; 100.0 1.9E-28 6.4E-33 232.7 20.9 227 51-302 67-309 (315)
70 3h28_A Sulfide-quinone reducta 100.0 4.9E-29 1.7E-33 248.0 13.5 274 2-302 26-330 (430)
71 1vdc_A NTR, NADPH dependent th 100.0 7.8E-28 2.7E-32 230.7 21.0 226 52-302 76-320 (333)
72 3d1c_A Flavin-containing putat 100.0 1.3E-27 4.5E-32 232.3 18.7 232 54-304 96-338 (369)
73 1hyu_A AHPF, alkyl hydroperoxi 100.0 5.7E-27 2E-31 238.3 22.7 226 52-302 273-513 (521)
74 4fk1_A Putative thioredoxin re 99.9 8.6E-28 3E-32 227.9 13.3 219 55-301 69-296 (304)
75 2a87_A TRXR, TR, thioredoxin r 99.9 7.5E-27 2.6E-31 224.4 19.7 225 52-302 77-313 (335)
76 1cjc_A Protein (adrenodoxin re 99.9 1.9E-27 6.5E-32 237.9 11.4 231 52-302 65-392 (460)
77 1gte_A Dihydropyrimidine dehyd 99.9 2.5E-26 8.7E-31 250.1 20.0 242 53-316 245-526 (1025)
78 4a9w_A Monooxygenase; baeyer-v 99.9 2.8E-26 9.5E-31 221.3 17.4 227 53-303 83-350 (357)
79 2vdc_G Glutamate synthase [NAD 99.9 2.8E-26 9.5E-31 229.0 14.1 226 52-302 178-441 (456)
80 2gag_A Heterotetrameric sarcos 99.9 7.7E-25 2.6E-29 237.0 18.5 219 54-302 189-441 (965)
81 2xve_A Flavin-containing monoo 99.9 2.8E-24 9.4E-29 215.5 20.7 212 54-304 109-340 (464)
82 1lqt_A FPRA; NADP+ derivative, 99.9 4.7E-26 1.6E-30 227.5 7.7 228 52-302 67-384 (456)
83 1o94_A Tmadh, trimethylamine d 99.9 8.4E-25 2.9E-29 230.6 12.5 223 77-336 468-721 (729)
84 1y56_A Hypothetical protein PH 99.9 1.4E-24 4.9E-29 219.2 13.3 234 4-303 131-375 (493)
85 3s5w_A L-ornithine 5-monooxyge 99.9 1.1E-23 3.8E-28 211.2 15.7 234 57-300 138-444 (463)
86 2ywl_A Thioredoxin reductase r 99.9 4.6E-23 1.6E-27 180.0 17.4 153 135-302 3-168 (180)
87 1ps9_A 2,4-dienoyl-COA reducta 99.9 7.2E-23 2.4E-27 214.3 12.8 200 53-300 432-671 (671)
88 3k30_A Histamine dehydrogenase 99.9 6.2E-23 2.1E-27 215.4 10.9 214 53-303 450-673 (690)
89 2gv8_A Monooxygenase; FMO, FAD 99.9 3.7E-22 1.3E-26 199.3 13.8 209 56-304 125-361 (447)
90 3gwf_A Cyclohexanone monooxyge 99.8 1.3E-20 4.3E-25 192.0 17.4 227 53-301 94-453 (540)
91 3uox_A Otemo; baeyer-villiger 99.8 2E-18 6.7E-23 176.0 15.2 115 53-168 94-220 (545)
92 4ap3_A Steroid monooxygenase; 99.8 4.9E-18 1.7E-22 173.2 16.8 110 53-168 106-226 (549)
93 1w4x_A Phenylacetone monooxyge 99.7 2.2E-17 7.5E-22 168.6 15.5 224 56-302 104-463 (542)
94 2cul_A Glucose-inhibited divis 99.7 1.1E-15 3.9E-20 138.6 16.4 155 134-302 4-229 (232)
95 4b63_A L-ornithine N5 monooxyg 99.5 3.5E-13 1.2E-17 136.0 19.1 211 57-269 156-457 (501)
96 1rp0_A ARA6, thiazole biosynth 99.3 1.2E-11 3.9E-16 115.6 11.0 165 133-302 39-272 (284)
97 2e5v_A L-aspartate oxidase; ar 99.2 7.5E-13 2.6E-17 132.6 -2.5 223 53-302 126-370 (472)
98 2bry_A NEDD9 interacting prote 99.1 3.1E-11 1.1E-15 121.6 3.4 148 88-236 37-233 (497)
99 3nlc_A Uncharacterized protein 98.9 1.2E-08 4.2E-13 103.3 12.3 112 133-245 107-291 (549)
100 4a9w_A Monooxygenase; baeyer-v 98.8 3.3E-08 1.1E-12 94.3 13.6 96 134-232 4-131 (357)
101 3lzw_A Ferredoxin--NADP reduct 98.7 4.3E-08 1.5E-12 92.7 10.9 100 134-235 8-128 (332)
102 3k7m_X 6-hydroxy-L-nicotine ox 98.7 3.9E-08 1.3E-12 96.9 10.2 83 186-271 215-307 (431)
103 3v76_A Flavoprotein; structura 98.7 7.7E-08 2.6E-12 94.5 12.1 100 132-234 26-188 (417)
104 3klj_A NAD(FAD)-dependent dehy 98.7 2.8E-08 9.7E-13 96.6 8.2 101 132-236 8-119 (385)
105 3itj_A Thioredoxin reductase 1 98.7 6.8E-08 2.3E-12 91.5 10.7 101 132-235 21-144 (338)
106 3sx6_A Sulfide-quinone reducta 98.7 3.1E-08 1E-12 98.1 8.5 100 134-238 5-117 (437)
107 3ab1_A Ferredoxin--NADP reduct 98.7 1.6E-07 5.6E-12 90.1 13.4 99 133-232 14-130 (360)
108 4ap3_A Steroid monooxygenase; 98.7 3.2E-07 1.1E-11 93.3 15.9 103 133-235 21-163 (549)
109 2zbw_A Thioredoxin reductase; 98.7 1.3E-07 4.4E-12 89.7 12.2 98 133-232 5-120 (335)
110 3f8d_A Thioredoxin reductase ( 98.7 1.2E-07 4.1E-12 89.1 11.6 100 134-236 16-128 (323)
111 3alj_A 2-methyl-3-hydroxypyrid 98.7 2E-07 6.9E-12 90.2 13.3 97 133-234 11-161 (379)
112 1fl2_A Alkyl hydroperoxide red 98.6 1.7E-07 5.8E-12 87.8 11.8 101 135-235 3-117 (310)
113 3fbs_A Oxidoreductase; structu 98.6 1.6E-07 5.6E-12 87.1 11.3 99 134-235 3-114 (297)
114 2gqf_A Hypothetical protein HI 98.6 2.3E-07 8E-12 90.6 12.6 99 134-234 5-169 (401)
115 3hyw_A Sulfide-quinone reducta 98.6 2.1E-08 7.2E-13 99.0 4.9 96 134-234 3-110 (430)
116 3gwf_A Cyclohexanone monooxyge 98.6 2E-07 6.8E-12 94.6 11.9 102 134-235 9-151 (540)
117 3vrd_B FCCB subunit, flavocyto 98.6 7E-08 2.4E-12 94.2 8.2 99 133-236 2-111 (401)
118 2q0l_A TRXR, thioredoxin reduc 98.6 2.9E-07 9.7E-12 86.3 11.7 98 135-235 3-116 (311)
119 4fk1_A Putative thioredoxin re 98.6 4.2E-07 1.4E-11 85.1 12.2 100 134-235 7-119 (304)
120 3d1c_A Flavin-containing putat 98.5 6.9E-07 2.4E-11 85.8 13.4 98 134-234 5-144 (369)
121 2q7v_A Thioredoxin reductase; 98.5 3.9E-07 1.3E-11 86.1 11.4 99 134-235 9-125 (325)
122 3h8l_A NADH oxidase; membrane 98.5 6.2E-08 2.1E-12 94.9 6.0 98 134-236 2-116 (409)
123 1vdc_A NTR, NADPH dependent th 98.5 2.9E-07 1E-11 87.1 10.3 98 134-235 9-126 (333)
124 1xhc_A NADH oxidase /nitrite r 98.5 9.5E-08 3.3E-12 92.3 6.9 99 132-236 7-116 (367)
125 2i0z_A NAD(FAD)-utilizing dehy 98.5 7.7E-07 2.6E-11 88.2 13.7 99 134-233 27-191 (447)
126 3fg2_P Putative rubredoxin red 98.5 1.8E-07 6.3E-12 91.4 9.0 98 133-235 1-112 (404)
127 1q1r_A Putidaredoxin reductase 98.5 3.6E-07 1.2E-11 90.2 10.8 101 133-237 4-118 (431)
128 3oz2_A Digeranylgeranylglycero 98.5 1.7E-06 5.9E-11 83.4 15.4 98 135-233 6-162 (397)
129 2xve_A Flavin-containing monoo 98.5 6E-07 2E-11 89.5 12.4 103 134-236 3-171 (464)
130 3h28_A Sulfide-quinone reducta 98.5 6.7E-08 2.3E-12 95.4 5.4 98 134-236 3-112 (430)
131 3uox_A Otemo; baeyer-villiger 98.5 2.7E-07 9.2E-12 93.8 9.9 103 133-235 9-151 (545)
132 3nix_A Flavoprotein/dehydrogen 98.5 5.2E-07 1.8E-11 88.4 11.6 100 134-233 6-166 (421)
133 3ef6_A Toluene 1,2-dioxygenase 98.5 6.2E-07 2.1E-11 87.9 12.0 99 134-236 3-114 (410)
134 2x3n_A Probable FAD-dependent 98.5 1E-06 3.4E-11 85.8 13.0 100 134-234 7-167 (399)
135 1qo8_A Flavocytochrome C3 fuma 98.5 4.2E-07 1.4E-11 92.9 10.7 142 93-234 77-313 (566)
136 1hyu_A AHPF, alkyl hydroperoxi 98.5 7.5E-07 2.6E-11 90.1 12.2 103 133-235 212-328 (521)
137 3lxd_A FAD-dependent pyridine 98.5 4.2E-07 1.4E-11 89.2 9.3 100 133-236 9-122 (415)
138 1trb_A Thioredoxin reductase; 98.5 8.7E-07 3E-11 83.3 11.2 98 134-235 6-118 (320)
139 2a87_A TRXR, TR, thioredoxin r 98.4 9.1E-07 3.1E-11 84.0 11.3 100 132-235 13-128 (335)
140 1yvv_A Amine oxidase, flavin-c 98.4 1.9E-06 6.5E-11 81.5 13.2 97 134-233 3-162 (336)
141 3dme_A Conserved exported prot 98.4 1.4E-06 4.9E-11 83.3 12.4 64 178-243 153-219 (369)
142 2gv8_A Monooxygenase; FMO, FAD 98.4 7.6E-07 2.6E-11 88.2 10.6 102 132-235 5-181 (447)
143 2vou_A 2,6-dihydroxypyridine h 98.4 1E-06 3.6E-11 85.7 11.2 100 133-234 5-154 (397)
144 3cty_A Thioredoxin reductase; 98.4 1.3E-06 4.5E-11 82.2 11.5 99 133-235 16-128 (319)
145 4a5l_A Thioredoxin reductase; 98.4 1.2E-06 4E-11 82.2 11.0 99 134-235 5-123 (314)
146 1y0p_A Fumarate reductase flav 98.4 2.1E-06 7.1E-11 87.8 13.3 101 133-233 126-317 (571)
147 1k0i_A P-hydroxybenzoate hydro 98.4 2.1E-06 7.1E-11 83.4 12.1 101 134-235 3-165 (394)
148 3oc4_A Oxidoreductase, pyridin 98.4 6.7E-07 2.3E-11 88.7 8.6 101 134-236 3-118 (452)
149 3r9u_A Thioredoxin reductase; 98.4 1.1E-06 3.8E-11 82.2 9.3 99 133-236 4-121 (315)
150 1ryi_A Glycine oxidase; flavop 98.4 2.1E-06 7E-11 82.9 11.4 62 177-242 166-227 (382)
151 3kd9_A Coenzyme A disulfide re 98.4 1.4E-06 4.7E-11 86.4 10.4 100 133-236 3-117 (449)
152 1w4x_A Phenylacetone monooxyge 98.3 7.2E-06 2.5E-10 83.3 15.8 98 134-231 17-152 (542)
153 4gcm_A TRXR, thioredoxin reduc 98.3 3E-06 1E-10 79.5 12.0 98 134-235 7-118 (312)
154 3s5w_A L-ornithine 5-monooxyge 98.3 8.5E-07 2.9E-11 88.2 8.6 103 134-236 31-195 (463)
155 3ics_A Coenzyme A-disulfide re 98.3 1.1E-06 3.9E-11 90.1 9.6 103 132-236 35-155 (588)
156 4hb9_A Similarities with proba 98.3 3.2E-06 1.1E-10 82.1 12.2 98 135-233 3-166 (412)
157 2gqw_A Ferredoxin reductase; f 98.3 1.5E-06 5.2E-11 85.0 9.7 100 133-236 7-116 (408)
158 2gag_B Heterotetrameric sarcos 98.3 2.8E-06 9.5E-11 82.6 11.4 63 177-242 176-238 (405)
159 3iwa_A FAD-dependent pyridine 98.3 1.6E-06 5.5E-11 86.5 9.6 101 134-236 4-128 (472)
160 4dgk_A Phytoene dehydrogenase; 98.3 3.4E-06 1.2E-10 84.6 12.1 50 182-232 228-277 (501)
161 2gqf_A Hypothetical protein HI 98.3 2.8E-08 9.6E-13 97.2 -3.2 48 53-101 116-169 (401)
162 1y56_B Sarcosine oxidase; dehy 98.3 4.5E-06 1.5E-10 80.6 12.4 54 179-234 153-206 (382)
163 3ces_A MNMG, tRNA uridine 5-ca 98.3 5E-06 1.7E-10 85.2 13.0 99 134-234 29-182 (651)
164 2zxi_A TRNA uridine 5-carboxym 98.3 5.7E-06 2E-10 84.4 13.0 99 134-234 28-181 (637)
165 3qj4_A Renalase; FAD/NAD(P)-bi 98.3 3.9E-06 1.3E-10 79.8 11.1 96 134-231 2-163 (342)
166 3cgv_A Geranylgeranyl reductas 98.3 4.4E-06 1.5E-10 80.9 11.4 99 134-233 5-162 (397)
167 3atr_A Conserved archaeal prot 98.3 5.1E-06 1.7E-10 82.4 12.0 100 134-234 7-163 (453)
168 2gmh_A Electron transfer flavo 98.3 9.3E-06 3.2E-10 83.2 14.1 101 134-234 36-218 (584)
169 3i3l_A Alkylhalidase CMLS; fla 98.2 7.5E-06 2.6E-10 83.8 12.8 100 133-233 23-188 (591)
170 3e1t_A Halogenase; flavoprotei 98.2 8.7E-06 3E-10 82.0 13.0 100 134-234 8-173 (512)
171 2uzz_A N-methyl-L-tryptophan o 98.2 9.4E-06 3.2E-10 77.9 12.7 53 178-233 152-204 (372)
172 3cp8_A TRNA uridine 5-carboxym 98.2 7.5E-06 2.6E-10 83.8 12.1 101 132-234 20-175 (641)
173 2cdu_A NADPH oxidase; flavoenz 98.2 1.4E-06 4.6E-11 86.5 6.5 100 135-236 2-120 (452)
174 3ps9_A TRNA 5-methylaminomethy 98.2 1.2E-05 4.1E-10 83.9 13.9 53 179-233 421-473 (676)
175 3ntd_A FAD-dependent pyridine 98.2 2.4E-06 8.2E-11 87.2 8.4 101 134-236 2-120 (565)
176 2vdc_G Glutamate synthase [NAD 98.2 1E-06 3.5E-11 87.5 5.3 90 132-232 121-218 (456)
177 1d4d_A Flavocytochrome C fumar 98.2 1.2E-05 4E-10 82.2 13.2 102 133-234 126-318 (572)
178 3rp8_A Flavoprotein monooxygen 98.2 8.2E-06 2.8E-10 79.6 11.2 100 132-235 22-183 (407)
179 2xdo_A TETX2 protein; tetracyc 98.2 5.8E-06 2E-10 80.5 9.9 101 132-234 25-183 (398)
180 1nhp_A NADH peroxidase; oxidor 98.2 2.3E-06 8E-11 84.7 7.1 101 134-236 1-118 (447)
181 3ihg_A RDME; flavoenzyme, anth 98.2 8.5E-06 2.9E-10 82.6 11.1 100 134-233 6-183 (535)
182 3fmw_A Oxygenase; mithramycin, 98.1 7.9E-06 2.7E-10 83.4 10.5 98 134-233 50-207 (570)
183 2gf3_A MSOX, monomeric sarcosi 98.1 1.5E-05 5.1E-10 76.9 11.9 62 177-242 152-213 (389)
184 2aqj_A Tryptophan halogenase, 98.1 3E-05 1E-09 78.6 14.4 56 179-235 169-224 (538)
185 3pvc_A TRNA 5-methylaminomethy 98.1 2.6E-05 9E-10 81.5 14.0 53 180-234 417-470 (689)
186 3fpz_A Thiazole biosynthetic e 98.1 3.5E-06 1.2E-10 79.8 6.6 36 133-168 65-102 (326)
187 3cgb_A Pyridine nucleotide-dis 98.1 8.7E-06 3E-10 81.4 9.7 101 134-236 37-155 (480)
188 4g6h_A Rotenone-insensitive NA 98.1 3.8E-06 1.3E-10 84.5 6.9 101 133-236 42-172 (502)
189 3nyc_A D-arginine dehydrogenas 98.1 1E-05 3.6E-10 77.7 9.7 60 179-242 158-217 (381)
190 4eqs_A Coenzyme A disulfide re 98.1 4.8E-06 1.6E-10 82.2 7.4 99 135-235 2-118 (437)
191 2gjc_A Thiazole biosynthetic e 98.1 2.8E-05 9.5E-10 73.2 12.2 102 134-235 66-241 (326)
192 3l8k_A Dihydrolipoyl dehydroge 98.1 7.5E-06 2.5E-10 81.5 8.8 98 134-236 5-147 (466)
193 1m6i_A Programmed cell death p 98.1 3.5E-06 1.2E-10 84.5 6.3 99 133-235 11-146 (493)
194 2bc0_A NADH oxidase; flavoprot 98.1 5.4E-06 1.9E-10 83.1 7.6 100 133-236 35-152 (490)
195 3dje_A Fructosyl amine: oxygen 98.1 3.4E-05 1.2E-09 75.9 13.2 55 178-233 164-221 (438)
196 1mo9_A ORF3; nucleotide bindin 98.1 1.5E-05 5.3E-10 80.4 10.7 97 133-236 43-189 (523)
197 2qae_A Lipoamide, dihydrolipoy 98.1 1E-05 3.5E-10 80.5 9.2 98 134-236 3-151 (468)
198 3o0h_A Glutathione reductase; 98.0 1.7E-05 5.8E-10 79.3 10.8 93 134-234 27-167 (484)
199 2qa2_A CABE, polyketide oxygen 98.0 3.1E-05 1.1E-09 77.8 12.5 100 132-233 11-166 (499)
200 1dxl_A Dihydrolipoamide dehydr 98.0 1.3E-05 4.4E-10 79.8 9.5 99 133-236 6-154 (470)
201 1zk7_A HGII, reductase, mercur 98.0 2.2E-05 7.4E-10 78.1 11.2 98 133-236 4-153 (467)
202 2r9z_A Glutathione amide reduc 98.0 2E-05 6.7E-10 78.4 10.4 95 133-236 4-145 (463)
203 4at0_A 3-ketosteroid-delta4-5a 98.0 4.1E-05 1.4E-09 77.0 12.9 58 176-233 203-264 (510)
204 1ebd_A E3BD, dihydrolipoamide 98.0 2E-05 7E-10 78.0 10.5 97 134-236 4-148 (455)
205 2v3a_A Rubredoxin reductase; a 98.0 1.2E-05 4.2E-10 77.8 8.5 98 133-235 4-115 (384)
206 1v59_A Dihydrolipoamide dehydr 98.0 1.6E-05 5.3E-10 79.4 9.5 96 134-234 6-158 (478)
207 3jsk_A Cypbp37 protein; octame 98.0 4.3E-05 1.5E-09 72.4 11.9 138 133-271 79-304 (344)
208 1zmd_A Dihydrolipoyl dehydroge 98.0 2.1E-05 7.1E-10 78.4 10.3 98 134-236 7-155 (474)
209 3c96_A Flavin-containing monoo 98.0 2.1E-05 7.3E-10 76.7 10.1 99 133-234 4-170 (410)
210 2qa1_A PGAE, polyketide oxygen 98.0 3.5E-05 1.2E-09 77.3 11.7 101 131-233 9-165 (500)
211 2e4g_A Tryptophan halogenase; 98.0 6.7E-05 2.3E-09 76.3 13.9 55 179-234 198-253 (550)
212 1y56_A Hypothetical protein PH 98.0 8.1E-06 2.8E-10 81.9 7.0 100 133-235 108-221 (493)
213 1ges_A Glutathione reductase; 98.0 3.7E-05 1.3E-09 76.1 11.6 94 134-236 5-146 (450)
214 2yqu_A 2-oxoglutarate dehydrog 98.0 1.7E-05 6E-10 78.5 9.0 95 135-235 3-143 (455)
215 2eq6_A Pyruvate dehydrogenase 98.0 2.4E-05 8.2E-10 77.8 9.9 93 134-235 7-145 (464)
216 3c4n_A Uncharacterized protein 98.0 1.5E-05 5.1E-10 77.8 8.2 106 134-243 37-246 (405)
217 2oln_A NIKD protein; flavoprot 98.0 6.6E-05 2.2E-09 72.7 12.7 59 180-242 158-216 (397)
218 1cjc_A Protein (adrenodoxin re 97.9 3.8E-06 1.3E-10 83.5 3.7 91 132-233 5-106 (460)
219 2hqm_A GR, grase, glutathione 97.9 2.7E-05 9.3E-10 77.7 10.0 98 133-236 11-163 (479)
220 2a8x_A Dihydrolipoyl dehydroge 97.9 3.2E-05 1.1E-09 76.8 10.3 96 134-235 4-148 (464)
221 3urh_A Dihydrolipoyl dehydroge 97.9 4.6E-05 1.6E-09 76.3 11.5 97 133-234 25-171 (491)
222 1lvl_A Dihydrolipoamide dehydr 97.9 3.4E-05 1.1E-09 76.6 10.4 93 134-235 6-148 (458)
223 4dna_A Probable glutathione re 97.9 1.7E-05 5.9E-10 78.8 8.2 93 134-234 6-146 (463)
224 1pj5_A N,N-dimethylglycine oxi 97.9 6.1E-05 2.1E-09 80.4 12.9 62 178-242 154-215 (830)
225 1gte_A Dihydropyrimidine dehyd 97.9 4.4E-06 1.5E-10 91.1 4.0 93 133-234 187-289 (1025)
226 3ka7_A Oxidoreductase; structu 97.9 0.00011 3.7E-09 71.8 13.5 50 182-233 203-252 (425)
227 1onf_A GR, grase, glutathione 97.9 1.5E-05 5E-10 80.2 7.3 95 134-236 3-156 (500)
228 2weu_A Tryptophan 5-halogenase 97.9 9.4E-05 3.2E-09 74.3 13.3 55 179-234 177-231 (511)
229 1ojt_A Surface protein; redox- 97.9 2E-05 6.9E-10 78.7 8.1 97 134-235 7-162 (482)
230 1xdi_A RV3303C-LPDA; reductase 97.9 5.9E-05 2E-09 75.6 11.5 101 134-236 3-159 (499)
231 2pyx_A Tryptophan halogenase; 97.9 8E-05 2.7E-09 75.2 12.3 55 179-234 179-234 (526)
232 1lqt_A FPRA; NADP+ derivative, 97.9 3.4E-06 1.2E-10 83.7 2.1 89 133-232 3-107 (456)
233 3k30_A Histamine dehydrogenase 97.9 6.1E-06 2.1E-10 86.3 4.0 88 133-234 391-489 (690)
234 1fec_A Trypanothione reductase 97.9 3.3E-05 1.1E-09 77.4 9.1 98 134-236 4-166 (490)
235 2gag_A Heterotetrameric sarcos 97.9 5.5E-05 1.9E-09 81.9 11.4 101 133-235 128-255 (965)
236 2wpf_A Trypanothione reductase 97.8 3.1E-05 1.1E-09 77.6 8.6 96 134-236 8-170 (495)
237 3nrn_A Uncharacterized protein 97.8 0.00017 5.7E-09 70.5 13.2 48 183-234 197-244 (421)
238 1ps9_A 2,4-dienoyl-COA reducta 97.8 2.6E-05 9E-10 81.2 7.2 87 133-236 373-470 (671)
239 2qcu_A Aerobic glycerol-3-phos 97.8 0.00019 6.4E-09 72.0 12.8 55 178-234 152-211 (501)
240 3dk9_A Grase, GR, glutathione 97.8 4.3E-05 1.5E-09 76.2 7.8 97 133-236 20-163 (478)
241 3axb_A Putative oxidoreductase 97.7 9.1E-05 3.1E-09 73.0 9.6 62 179-242 185-262 (448)
242 2wdq_A Succinate dehydrogenase 97.7 0.00039 1.3E-08 71.1 14.1 52 181-232 149-205 (588)
243 3lad_A Dihydrolipoamide dehydr 97.7 0.00011 3.6E-09 73.3 9.6 96 134-234 4-155 (476)
244 1o94_A Tmadh, trimethylamine d 97.7 1.5E-05 5.1E-10 83.8 3.1 88 133-234 389-492 (729)
245 2e5v_A L-aspartate oxidase; ar 97.7 0.00022 7.4E-09 71.0 11.2 98 135-234 1-177 (472)
246 3qfa_A Thioredoxin reductase 1 97.7 0.0002 6.9E-09 72.2 11.0 98 134-236 33-188 (519)
247 3da1_A Glycerol-3-phosphate de 97.6 0.00025 8.4E-09 72.2 11.0 61 180-242 175-240 (561)
248 3c4a_A Probable tryptophan hyd 97.6 4.2E-05 1.4E-09 73.9 4.8 88 134-234 1-144 (381)
249 2dkh_A 3-hydroxybenzoate hydro 97.5 0.00033 1.1E-08 72.4 10.9 100 134-233 33-211 (639)
250 3dgz_A Thioredoxin reductase 2 97.5 0.00037 1.3E-08 69.6 10.7 98 134-236 7-162 (488)
251 1kf6_A Fumarate reductase flav 97.5 0.00063 2.1E-08 69.8 11.8 98 134-232 6-196 (602)
252 2r0c_A REBC; flavin adenine di 97.5 0.00082 2.8E-08 68.1 12.3 96 134-234 27-197 (549)
253 3dgh_A TRXR-1, thioredoxin red 97.4 0.00067 2.3E-08 67.6 10.8 99 133-236 9-165 (483)
254 3ic9_A Dihydrolipoamide dehydr 97.4 0.00046 1.6E-08 69.0 9.0 33 134-166 9-41 (492)
255 2x8g_A Thioredoxin glutathione 97.3 0.0011 3.9E-08 67.8 11.9 32 133-164 107-138 (598)
256 2rgh_A Alpha-glycerophosphate 97.3 0.0021 7.2E-08 65.4 13.6 34 132-165 31-64 (571)
257 1chu_A Protein (L-aspartate ox 97.3 0.00059 2E-08 69.1 9.2 33 134-167 9-41 (540)
258 3pl8_A Pyranose 2-oxidase; sub 97.3 0.00061 2.1E-08 70.1 9.2 56 189-244 274-335 (623)
259 2h88_A Succinate dehydrogenase 97.3 0.0017 5.7E-08 66.8 12.3 32 134-165 19-50 (621)
260 4gde_A UDP-galactopyranose mut 97.3 0.00036 1.2E-08 69.8 6.9 47 181-231 228-274 (513)
261 3i6d_A Protoporphyrinogen oxid 97.2 0.0018 6.3E-08 63.7 11.4 41 190-232 248-288 (470)
262 2zxi_A TRNA uridine 5-carboxym 97.2 0.0051 1.8E-07 62.8 14.4 85 55-164 132-220 (637)
263 1pn0_A Phenol 2-monooxygenase; 97.1 0.0022 7.5E-08 66.5 11.2 32 134-165 9-45 (665)
264 2bs2_A Quinol-fumarate reducta 97.1 0.0039 1.3E-07 64.5 12.7 33 134-166 6-38 (660)
265 4gut_A Lysine-specific histone 97.1 0.0021 7.3E-08 67.7 10.8 42 188-231 542-583 (776)
266 3kkj_A Amine oxidase, flavin-c 97.1 0.00048 1.6E-08 61.7 5.1 34 135-168 4-37 (336)
267 1jnr_A Adenylylsulfate reducta 96.8 0.0063 2.2E-07 62.8 11.8 33 134-166 23-59 (643)
268 2ywl_A Thioredoxin reductase r 96.8 0.0012 4.1E-08 56.1 4.7 48 51-100 61-110 (180)
269 4b1b_A TRXR, thioredoxin reduc 96.7 0.0069 2.4E-07 61.1 10.9 31 135-165 44-74 (542)
270 3lk7_A UDP-N-acetylmuramoylala 96.6 0.002 6.8E-08 63.6 5.8 88 132-244 8-98 (451)
271 4b63_A L-ornithine N5 monooxyg 96.5 0.013 4.3E-07 58.6 10.9 102 135-236 41-217 (501)
272 3eag_A UDP-N-acetylmuramate:L- 96.5 0.0035 1.2E-07 59.1 6.3 80 132-238 3-83 (326)
273 3gyx_A Adenylylsulfate reducta 96.5 0.0066 2.3E-07 62.7 8.9 32 134-165 23-60 (662)
274 3ces_A MNMG, tRNA uridine 5-ca 96.5 0.0033 1.1E-07 64.4 6.3 85 55-164 133-221 (651)
275 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0091 3.1E-07 52.7 6.3 107 132-270 30-141 (223)
276 2iid_A L-amino-acid oxidase; f 95.6 0.0096 3.3E-07 59.2 4.9 39 132-170 32-70 (498)
277 3ihm_A Styrene monooxygenase A 95.5 0.0099 3.4E-07 58.1 4.6 34 133-166 22-55 (430)
278 2b9w_A Putative aminooxidase; 95.5 0.014 4.6E-07 56.7 5.5 37 132-168 5-42 (424)
279 3nks_A Protoporphyrinogen oxid 95.4 0.012 4.1E-07 58.1 4.9 34 134-167 3-38 (477)
280 3g5s_A Methylenetetrahydrofola 95.4 0.015 5.3E-07 55.7 5.2 33 134-166 2-34 (443)
281 3p1w_A Rabgdi protein; GDI RAB 95.4 0.032 1.1E-06 55.1 7.7 58 175-232 256-313 (475)
282 2jae_A L-amino acid oxidase; o 95.3 0.016 5.6E-07 57.4 5.6 39 131-169 9-47 (489)
283 3i83_A 2-dehydropantoate 2-red 95.2 0.062 2.1E-06 50.2 8.9 85 134-241 3-91 (320)
284 2e1m_A L-glutamate oxidase; L- 95.2 0.019 6.6E-07 55.0 5.4 37 132-168 43-80 (376)
285 2bcg_G Secretory pathway GDP d 95.2 0.017 5.7E-07 56.9 5.1 40 132-171 10-49 (453)
286 1c0p_A D-amino acid oxidase; a 95.2 0.022 7.5E-07 54.0 5.6 33 133-165 6-38 (363)
287 1rsg_A FMS1 protein; FAD bindi 95.2 0.018 6.1E-07 57.6 5.2 36 133-168 8-44 (516)
288 4hv4_A UDP-N-acetylmuramate--L 95.1 0.022 7.6E-07 56.7 5.7 78 131-238 20-98 (494)
289 1s3e_A Amine oxidase [flavin-c 95.1 0.018 6.2E-07 57.6 5.0 36 133-168 4-39 (520)
290 2ivd_A PPO, PPOX, protoporphyr 95.0 0.021 7E-07 56.4 5.2 37 132-168 15-51 (478)
291 3fwz_A Inner membrane protein 94.9 0.066 2.3E-06 43.3 7.0 77 133-233 7-83 (140)
292 2x5o_A UDP-N-acetylmuramoylala 94.9 0.0089 3E-07 58.7 1.9 79 132-239 4-82 (439)
293 2yg5_A Putrescine oxidase; oxi 94.8 0.026 8.9E-07 55.2 5.2 35 134-168 6-40 (453)
294 1sez_A Protoporphyrinogen oxid 94.8 0.027 9.2E-07 56.0 5.3 37 132-168 12-48 (504)
295 3alj_A 2-methyl-3-hydroxypyrid 94.7 0.058 2E-06 51.4 7.4 46 54-100 115-160 (379)
296 2bi7_A UDP-galactopyranose mut 94.7 0.029 9.9E-07 53.9 5.2 36 134-169 4-39 (384)
297 2g1u_A Hypothetical protein TM 94.6 0.048 1.6E-06 44.9 5.6 37 131-167 17-53 (155)
298 3hdq_A UDP-galactopyranose mut 94.5 0.034 1.2E-06 53.6 5.2 36 133-168 29-64 (397)
299 2vvm_A Monoamine oxidase N; FA 94.5 0.033 1.1E-06 55.3 5.2 36 133-168 39-74 (495)
300 3g3e_A D-amino-acid oxidase; F 94.4 0.026 8.7E-07 53.3 3.9 32 135-166 2-39 (351)
301 1v0j_A UDP-galactopyranose mut 94.3 0.031 1E-06 54.0 4.4 36 133-168 7-43 (399)
302 1i8t_A UDP-galactopyranose mut 94.1 0.037 1.3E-06 52.8 4.5 34 135-168 3-36 (367)
303 3lov_A Protoporphyrinogen oxid 94.1 0.035 1.2E-06 54.7 4.4 34 134-167 5-40 (475)
304 2z3y_A Lysine-specific histone 94.0 0.051 1.7E-06 56.2 5.5 36 132-167 106-141 (662)
305 2xag_A Lysine-specific histone 94.0 0.054 1.9E-06 57.5 5.7 35 133-167 278-312 (852)
306 1id1_A Putative potassium chan 93.9 0.082 2.8E-06 43.4 5.6 33 133-165 3-35 (153)
307 3hn7_A UDP-N-acetylmuramate-L- 93.8 0.071 2.4E-06 53.5 5.9 79 132-238 18-97 (524)
308 1kf6_A Fumarate reductase flav 93.8 0.054 1.9E-06 55.3 5.1 48 54-101 142-198 (602)
309 2i0z_A NAD(FAD)-utilizing dehy 93.7 0.094 3.2E-06 51.4 6.6 48 53-100 141-191 (447)
310 3hn2_A 2-dehydropantoate 2-red 93.7 0.09 3.1E-06 48.9 6.1 85 134-240 3-88 (312)
311 3dje_A Fructosyl amine: oxygen 93.7 0.077 2.6E-06 51.6 5.8 50 54-103 169-224 (438)
312 4dsg_A UDP-galactopyranose mut 93.6 0.074 2.5E-06 52.8 5.6 37 132-168 8-45 (484)
313 1pjq_A CYSG, siroheme synthase 93.6 0.079 2.7E-06 52.1 5.7 78 132-237 11-89 (457)
314 3llv_A Exopolyphosphatase-rela 93.4 0.1 3.4E-06 42.1 5.2 33 133-165 6-38 (141)
315 3hwr_A 2-dehydropantoate 2-red 93.3 0.18 6.1E-06 47.0 7.5 33 132-165 18-50 (318)
316 3cp8_A TRNA uridine 5-carboxym 93.3 0.05 1.7E-06 55.6 3.8 85 55-163 126-214 (641)
317 2cul_A Glucose-inhibited divis 93.2 0.1 3.6E-06 46.0 5.5 47 54-101 76-126 (232)
318 1lss_A TRK system potassium up 93.2 0.11 3.8E-06 41.4 5.2 33 133-165 4-36 (140)
319 3nlc_A Uncharacterized protein 93.2 0.14 4.9E-06 51.5 6.9 49 53-101 227-278 (549)
320 3v76_A Flavoprotein; structura 93.1 0.1 3.4E-06 50.7 5.6 47 53-100 139-187 (417)
321 3p1w_A Rabgdi protein; GDI RAB 93.0 0.095 3.2E-06 51.7 5.2 38 133-170 20-57 (475)
322 3ic5_A Putative saccharopine d 93.0 0.1 3.4E-06 40.2 4.4 33 133-165 5-38 (118)
323 1d5t_A Guanine nucleotide diss 93.0 0.097 3.3E-06 51.1 5.2 37 133-169 6-42 (433)
324 2hmt_A YUAA protein; RCK, KTN, 92.9 0.11 3.9E-06 41.5 4.8 34 132-165 5-38 (144)
325 3ego_A Probable 2-dehydropanto 92.7 0.2 7E-06 46.3 6.9 77 134-233 3-79 (307)
326 2x3n_A Probable FAD-dependent 92.5 0.15 5E-06 48.9 5.8 45 56-100 117-166 (399)
327 3nrn_A Uncharacterized protein 92.5 0.22 7.4E-06 48.1 7.0 46 54-99 197-242 (421)
328 3dme_A Conserved exported prot 92.4 0.14 4.7E-06 48.1 5.4 48 53-100 157-209 (369)
329 1kyq_A Met8P, siroheme biosynt 92.4 0.084 2.9E-06 48.0 3.7 34 132-165 12-45 (274)
330 1b37_A Protein (polyamine oxid 92.3 0.13 4.5E-06 50.5 5.3 35 133-167 4-39 (472)
331 2vvm_A Monoamine oxidase N; FA 92.1 0.32 1.1E-05 48.0 7.8 55 176-232 256-311 (495)
332 1chu_A Protein (L-aspartate ox 91.9 0.15 5.1E-06 51.3 5.1 58 44-101 136-209 (540)
333 3ado_A Lambda-crystallin; L-gu 91.7 0.22 7.6E-06 46.3 5.8 38 132-169 5-42 (319)
334 3c85_A Putative glutathione-re 91.6 0.17 5.9E-06 42.7 4.6 34 133-166 39-73 (183)
335 1y56_B Sarcosine oxidase; dehy 91.6 0.19 6.4E-06 47.7 5.3 47 53-100 156-205 (382)
336 3nyc_A D-arginine dehydrogenas 91.4 0.13 4.5E-06 48.6 3.9 46 54-100 162-209 (381)
337 2uzz_A N-methyl-L-tryptophan o 91.3 0.23 7.8E-06 46.8 5.6 47 54-101 157-205 (372)
338 2bs2_A Quinol-fumarate reducta 91.3 0.18 6.2E-06 52.0 5.1 49 53-101 165-221 (660)
339 3ps9_A TRNA 5-methylaminomethy 90.9 0.3 1E-05 50.4 6.4 48 54-101 425-474 (676)
340 4dgk_A Phytoene dehydrogenase; 90.8 0.3 1E-05 48.2 6.1 47 53-99 228-277 (501)
341 1vg0_A RAB proteins geranylger 90.8 0.72 2.5E-05 47.2 8.9 59 176-234 379-438 (650)
342 2bcg_G Secretory pathway GDP d 90.7 0.43 1.5E-05 46.7 7.1 58 176-234 243-301 (453)
343 3ayj_A Pro-enzyme of L-phenyla 90.7 0.12 3.9E-06 53.7 2.9 38 133-170 56-102 (721)
344 4ezb_A Uncharacterized conserv 90.6 0.26 8.9E-06 45.9 5.0 34 133-166 24-58 (317)
345 3pvc_A TRNA 5-methylaminomethy 90.3 0.4 1.4E-05 49.7 6.7 48 54-101 420-470 (689)
346 4e12_A Diketoreductase; oxidor 90.1 0.39 1.3E-05 43.8 5.8 37 133-169 4-40 (283)
347 2gag_B Heterotetrameric sarcos 89.9 0.28 9.7E-06 46.7 4.9 47 53-100 181-230 (405)
348 1ryi_A Glycine oxidase; flavop 89.6 0.3 1E-05 46.2 4.8 46 54-100 172-219 (382)
349 1kdg_A CDH, cellobiose dehydro 89.4 0.34 1.2E-05 48.7 5.1 56 188-244 209-272 (546)
350 2gf3_A MSOX, monomeric sarcosi 89.3 0.39 1.3E-05 45.4 5.3 47 53-100 157-205 (389)
351 3ojo_A CAP5O; rossmann fold, c 89.2 0.69 2.4E-05 44.9 6.9 62 132-193 10-78 (431)
352 2oln_A NIKD protein; flavoprot 89.1 0.42 1.4E-05 45.6 5.3 45 54-99 161-207 (397)
353 3ka7_A Oxidoreductase; structu 88.9 0.51 1.8E-05 45.3 5.9 46 53-99 203-251 (425)
354 2bry_A NEDD9 interacting prote 88.9 0.43 1.5E-05 47.3 5.5 49 53-101 173-231 (497)
355 3e8x_A Putative NAD-dependent 88.9 0.47 1.6E-05 41.6 5.2 35 132-166 20-55 (236)
356 3gyx_A Adenylylsulfate reducta 88.9 0.27 9.2E-06 50.7 4.0 49 53-101 173-234 (662)
357 1d5t_A Guanine nucleotide diss 88.9 0.32 1.1E-05 47.3 4.4 57 176-234 235-291 (433)
358 3oj0_A Glutr, glutamyl-tRNA re 88.7 0.2 7E-06 40.4 2.4 34 132-165 20-53 (144)
359 3l4b_C TRKA K+ channel protien 88.5 0.39 1.3E-05 41.8 4.3 32 135-166 2-33 (218)
360 3l9w_A Glutathione-regulated p 88.3 0.61 2.1E-05 45.1 5.9 50 133-195 4-53 (413)
361 4ffl_A PYLC; amino acid, biosy 88.3 0.51 1.7E-05 44.5 5.3 32 134-165 2-33 (363)
362 3k7m_X 6-hydroxy-L-nicotine ox 88.3 0.49 1.7E-05 45.6 5.3 41 57-98 215-257 (431)
363 3qj4_A Renalase; FAD/NAD(P)-bi 88.2 0.61 2.1E-05 43.4 5.8 42 57-98 120-163 (342)
364 3gpi_A NAD-dependent epimerase 88.2 0.63 2.2E-05 42.0 5.7 34 133-166 3-36 (286)
365 1k0i_A P-hydroxybenzoate hydro 88.0 1 3.5E-05 42.8 7.3 47 55-101 112-164 (394)
366 3nix_A Flavoprotein/dehydrogen 87.9 0.44 1.5E-05 45.8 4.7 47 54-100 114-166 (421)
367 4dio_A NAD(P) transhydrogenase 87.8 0.62 2.1E-05 44.7 5.5 35 132-166 189-223 (405)
368 2raf_A Putative dinucleotide-b 87.7 0.64 2.2E-05 40.2 5.2 35 132-166 18-52 (209)
369 1vg0_A RAB proteins geranylger 87.7 0.72 2.5E-05 47.1 6.2 54 134-188 9-62 (650)
370 3p2y_A Alanine dehydrogenase/p 87.7 0.45 1.6E-05 45.3 4.4 35 132-166 183-217 (381)
371 1f0y_A HCDH, L-3-hydroxyacyl-C 87.6 0.57 1.9E-05 43.1 5.0 35 133-167 15-49 (302)
372 2aqj_A Tryptophan halogenase, 87.6 0.97 3.3E-05 45.2 7.1 47 54-101 173-223 (538)
373 4b4o_A Epimerase family protei 87.5 0.61 2.1E-05 42.5 5.1 33 135-167 2-35 (298)
374 3nks_A Protoporphyrinogen oxid 87.4 0.87 3E-05 44.5 6.6 55 176-232 235-289 (477)
375 1jw9_B Molybdopterin biosynthe 87.4 0.5 1.7E-05 42.2 4.4 35 132-166 30-65 (249)
376 2vou_A 2,6-dihydroxypyridine h 87.4 0.65 2.2E-05 44.3 5.5 42 59-100 110-153 (397)
377 3t37_A Probable dehydrogenase; 87.2 0.44 1.5E-05 47.4 4.2 33 134-166 18-51 (526)
378 3axb_A Putative oxidoreductase 87.2 0.56 1.9E-05 45.5 4.9 47 53-100 188-254 (448)
379 4gde_A UDP-galactopyranose mut 86.9 0.32 1.1E-05 48.0 3.1 43 56-98 232-274 (513)
380 2e4g_A Tryptophan halogenase; 86.9 0.72 2.5E-05 46.3 5.7 46 55-101 203-253 (550)
381 1ks9_A KPA reductase;, 2-dehyd 86.7 0.72 2.5E-05 41.7 5.1 33 135-167 2-34 (291)
382 3atr_A Conserved archaeal prot 86.6 0.7 2.4E-05 45.1 5.3 46 56-101 110-163 (453)
383 1x13_A NAD(P) transhydrogenase 86.6 0.71 2.4E-05 44.4 5.2 35 132-166 171-205 (401)
384 3d4o_A Dipicolinate synthase s 86.5 0.82 2.8E-05 41.8 5.4 34 132-165 154-187 (293)
385 2dpo_A L-gulonate 3-dehydrogen 86.5 0.72 2.5E-05 42.9 5.1 36 133-168 6-41 (319)
386 1n4w_A CHOD, cholesterol oxida 86.4 0.73 2.5E-05 45.7 5.4 34 134-167 6-39 (504)
387 1rp0_A ARA6, thiazole biosynth 86.4 0.72 2.5E-05 41.9 5.0 47 55-101 128-192 (284)
388 2rir_A Dipicolinate synthase, 86.4 0.82 2.8E-05 42.0 5.4 34 132-165 156-189 (300)
389 3phh_A Shikimate dehydrogenase 86.3 1.4 4.9E-05 39.8 6.8 34 133-166 118-151 (269)
390 2f00_A UDP-N-acetylmuramate--L 86.3 0.79 2.7E-05 45.3 5.6 75 132-236 18-93 (491)
391 3pp8_A Glyoxylate/hydroxypyruv 86.3 1.2 4.1E-05 41.3 6.4 36 132-167 138-173 (315)
392 1ju2_A HydroxynitrIle lyase; f 86.3 0.44 1.5E-05 47.8 3.7 33 134-167 27-59 (536)
393 1nyt_A Shikimate 5-dehydrogena 86.2 0.85 2.9E-05 41.2 5.3 34 132-165 118-151 (271)
394 3kkj_A Amine oxidase, flavin-c 86.2 0.53 1.8E-05 41.2 3.9 37 255-302 289-325 (336)
395 3n58_A Adenosylhomocysteinase; 86.2 0.9 3.1E-05 44.0 5.6 36 131-166 245-280 (464)
396 1l7d_A Nicotinamide nucleotide 86.1 0.83 2.8E-05 43.6 5.4 35 132-166 171-205 (384)
397 3gvp_A Adenosylhomocysteinase 86.1 0.91 3.1E-05 43.8 5.6 35 132-166 219-253 (435)
398 2weu_A Tryptophan 5-halogenase 86.0 1.3 4.3E-05 43.9 6.9 47 54-101 181-231 (511)
399 2eez_A Alanine dehydrogenase; 86.0 0.87 3E-05 43.2 5.5 35 132-166 165-199 (369)
400 1y0p_A Fumarate reductase flav 85.8 0.95 3.3E-05 45.6 6.0 48 53-100 262-317 (571)
401 3ius_A Uncharacterized conserv 85.8 0.64 2.2E-05 41.9 4.3 33 134-166 6-38 (286)
402 3g79_A NDP-N-acetyl-D-galactos 85.6 2.4 8.4E-05 41.6 8.6 37 131-167 16-54 (478)
403 1s3e_A Amine oxidase [flavin-c 85.6 0.86 3E-05 45.2 5.5 54 177-232 214-267 (520)
404 2vhw_A Alanine dehydrogenase; 85.6 0.94 3.2E-05 43.2 5.5 35 132-166 167-201 (377)
405 3q2o_A Phosphoribosylaminoimid 85.6 0.94 3.2E-05 43.2 5.5 35 131-165 12-46 (389)
406 1hdo_A Biliverdin IX beta redu 85.5 0.9 3.1E-05 38.4 4.9 34 134-167 4-38 (206)
407 3i6i_A Putative leucoanthocyan 85.5 2.4 8.2E-05 39.4 8.2 56 133-194 10-66 (346)
408 3vtf_A UDP-glucose 6-dehydroge 85.3 1.7 5.7E-05 42.3 7.1 60 134-193 22-88 (444)
409 3dtt_A NADP oxidoreductase; st 85.3 1 3.6E-05 39.9 5.3 35 132-166 18-52 (245)
410 1p3d_A UDP-N-acetylmuramate--a 85.2 0.78 2.7E-05 45.2 4.9 75 132-236 17-92 (475)
411 3e1t_A Halogenase; flavoprotei 85.2 1.1 3.9E-05 44.4 6.1 48 54-101 119-173 (512)
412 1coy_A Cholesterol oxidase; ox 85.0 0.9 3.1E-05 45.1 5.3 34 134-167 12-45 (507)
413 3ond_A Adenosylhomocysteinase; 84.9 0.98 3.4E-05 44.4 5.3 34 132-165 264-297 (488)
414 4a7p_A UDP-glucose dehydrogena 84.8 1.9 6.6E-05 42.0 7.4 62 132-193 7-75 (446)
415 1zej_A HBD-9, 3-hydroxyacyl-CO 84.7 0.96 3.3E-05 41.5 4.9 34 132-166 11-44 (293)
416 4e4t_A Phosphoribosylaminoimid 84.6 1.1 3.6E-05 43.4 5.4 36 130-165 32-67 (419)
417 3ew7_A LMO0794 protein; Q8Y8U8 84.5 1.1 3.8E-05 38.4 5.1 32 135-166 2-34 (221)
418 2pyx_A Tryptophan halogenase; 84.4 1.4 4.9E-05 43.8 6.5 46 55-101 184-234 (526)
419 3cgv_A Geranylgeranyl reductas 84.4 0.9 3.1E-05 43.0 4.8 46 55-100 111-162 (397)
420 3pef_A 6-phosphogluconate dehy 84.4 1.1 3.7E-05 40.8 5.1 34 134-167 2-35 (287)
421 3ihg_A RDME; flavoenzyme, anth 84.4 0.9 3.1E-05 45.3 5.0 46 55-100 129-183 (535)
422 4a5o_A Bifunctional protein fo 84.3 1.1 3.8E-05 40.7 5.0 34 132-165 160-194 (286)
423 4id9_A Short-chain dehydrogena 84.2 1.1 3.6E-05 41.7 5.1 35 132-166 18-53 (347)
424 2xdo_A TETX2 protein; tetracyc 84.2 1.1 3.8E-05 42.7 5.3 42 60-101 140-183 (398)
425 2ew2_A 2-dehydropantoate 2-red 84.1 1 3.5E-05 41.2 4.9 32 134-165 4-35 (316)
426 2vns_A Metalloreductase steap3 84.1 1.2 4.2E-05 38.5 5.1 33 133-165 28-60 (215)
427 3g17_A Similar to 2-dehydropan 84.1 0.78 2.7E-05 42.0 4.0 33 134-166 3-35 (294)
428 1b0a_A Protein (fold bifunctio 84.0 1.2 4E-05 40.6 5.0 35 132-166 158-193 (288)
429 2gk4_A Conserved hypothetical 84.0 1.6 5.4E-05 38.5 5.7 37 132-168 2-55 (232)
430 3ghy_A Ketopantoate reductase 83.9 1 3.4E-05 42.1 4.8 77 134-232 4-81 (335)
431 2wdq_A Succinate dehydrogenase 83.9 0.51 1.8E-05 47.9 2.9 49 52-100 149-206 (588)
432 2qa2_A CABE, polyketide oxygen 83.9 1.4 4.9E-05 43.6 6.1 47 54-100 115-166 (499)
433 3vps_A TUNA, NAD-dependent epi 83.8 1.3 4.3E-05 40.5 5.4 36 132-167 6-42 (321)
434 3orq_A N5-carboxyaminoimidazol 83.8 1.3 4.4E-05 42.1 5.5 35 131-165 10-44 (377)
435 1a4i_A Methylenetetrahydrofola 83.7 1.2 4.2E-05 40.7 5.0 47 119-165 148-198 (301)
436 4a26_A Putative C-1-tetrahydro 83.7 2.3 7.9E-05 38.9 6.9 35 132-166 164-199 (300)
437 1pj5_A N,N-dimethylglycine oxi 83.7 1.1 3.6E-05 47.6 5.4 46 54-100 159-207 (830)
438 2egg_A AROE, shikimate 5-dehyd 83.6 1.2 4.3E-05 40.8 5.2 34 132-165 140-174 (297)
439 4g65_A TRK system potassium up 83.6 0.67 2.3E-05 45.5 3.5 32 135-166 5-36 (461)
440 3h2s_A Putative NADH-flavin re 83.5 1.2 4.3E-05 38.2 5.0 32 135-166 2-34 (224)
441 2dbq_A Glyoxylate reductase; D 83.5 1.4 4.7E-05 41.2 5.5 35 132-166 149-183 (334)
442 1pjc_A Protein (L-alanine dehy 83.5 1.3 4.5E-05 41.8 5.5 35 132-166 166-200 (361)
443 3h9u_A Adenosylhomocysteinase; 83.5 1 3.6E-05 43.5 4.7 35 132-166 210-244 (436)
444 3ce6_A Adenosylhomocysteinase; 83.5 1.2 4.1E-05 44.0 5.3 37 130-166 271-307 (494)
445 1p77_A Shikimate 5-dehydrogena 83.4 1 3.4E-05 40.8 4.4 35 132-166 118-152 (272)
446 3mog_A Probable 3-hydroxybutyr 83.4 1.4 4.9E-05 43.4 5.8 36 133-168 5-40 (483)
447 2z1m_A GDP-D-mannose dehydrata 83.2 1.3 4.5E-05 40.9 5.3 35 133-167 3-38 (345)
448 1qo8_A Flavocytochrome C3 fuma 83.2 1.2 4.1E-05 44.8 5.3 49 53-101 257-313 (566)
449 1jnr_A Adenylylsulfate reducta 83.1 0.96 3.3E-05 46.4 4.6 47 55-101 160-219 (643)
450 1d4d_A Flavocytochrome C fumar 83.1 1.7 5.8E-05 43.8 6.4 49 53-101 262-318 (572)
451 1edz_A 5,10-methylenetetrahydr 83.0 1.2 4.2E-05 41.2 4.8 34 132-165 176-210 (320)
452 1u7z_A Coenzyme A biosynthesis 82.7 1.4 4.9E-05 38.6 4.9 35 132-166 7-58 (226)
453 1jay_A Coenzyme F420H2:NADP+ o 82.7 1.4 4.7E-05 37.8 4.9 32 135-166 2-34 (212)
454 1qyc_A Phenylcoumaran benzylic 82.7 3.8 0.00013 37.1 8.1 58 133-194 4-62 (308)
455 1yvv_A Amine oxidase, flavin-c 82.6 1.5 5.1E-05 40.4 5.4 41 59-99 118-161 (336)
456 1gpe_A Protein (glucose oxidas 82.5 1.3 4.4E-05 44.9 5.2 33 134-166 25-58 (587)
457 3p2o_A Bifunctional protein fo 82.5 1.5 5E-05 39.9 5.0 34 132-165 159-193 (285)
458 3ngx_A Bifunctional protein fo 82.5 1.4 4.7E-05 39.8 4.8 35 131-165 148-183 (276)
459 3tnl_A Shikimate dehydrogenase 82.5 1.6 5.5E-05 40.4 5.4 35 132-166 153-188 (315)
460 3doj_A AT3G25530, dehydrogenas 82.4 1.3 4.6E-05 40.7 4.9 36 132-167 20-55 (310)
461 1bg6_A N-(1-D-carboxylethyl)-L 82.4 1.3 4.4E-05 41.5 4.9 33 134-166 5-37 (359)
462 1y1p_A ARII, aldehyde reductas 82.3 1.5 5.3E-05 40.3 5.4 35 132-166 10-45 (342)
463 1wwk_A Phosphoglycerate dehydr 82.3 1.7 5.8E-05 40.1 5.5 35 132-166 141-175 (307)
464 1lld_A L-lactate dehydrogenase 82.2 1.5 5.1E-05 40.5 5.2 34 133-166 7-42 (319)
465 3hg7_A D-isomer specific 2-hyd 82.2 1.6 5.3E-05 40.7 5.3 35 132-166 139-173 (324)
466 3ba1_A HPPR, hydroxyphenylpyru 82.2 1.6 5.5E-05 40.8 5.4 35 132-166 163-197 (333)
467 2qa1_A PGAE, polyketide oxygen 82.2 1.5 5E-05 43.5 5.4 47 54-100 114-165 (500)
468 3k6j_A Protein F01G10.3, confi 82.0 1.4 4.7E-05 43.1 5.0 35 133-167 54-88 (460)
469 3qiv_A Short-chain dehydrogena 82.0 3.9 0.00013 36.0 7.7 34 132-165 8-42 (253)
470 2ekl_A D-3-phosphoglycerate de 82.0 1.7 5.9E-05 40.2 5.5 35 132-166 141-175 (313)
471 3l07_A Bifunctional protein fo 81.9 1.5 5.1E-05 39.8 4.8 34 132-165 160-194 (285)
472 3i3l_A Alkylhalidase CMLS; fla 81.8 1.9 6.6E-05 43.6 6.2 47 54-100 136-188 (591)
473 3ruf_A WBGU; rossmann fold, UD 81.7 1.8 6E-05 40.3 5.6 37 131-167 23-60 (351)
474 3q9t_A Choline dehydrogenase a 81.7 1.1 3.8E-05 45.3 4.3 33 135-167 8-41 (577)
475 2cuk_A Glycerate dehydrogenase 81.7 1.8 6.2E-05 39.9 5.5 35 132-166 143-177 (311)
476 3jyo_A Quinate/shikimate dehyd 81.7 1.7 5.9E-05 39.5 5.3 35 132-166 126-161 (283)
477 1leh_A Leucine dehydrogenase; 81.6 1.7 5.7E-05 41.2 5.3 33 132-164 172-204 (364)
478 2jbv_A Choline oxidase; alcoho 81.6 1.2 4E-05 44.8 4.5 33 134-166 14-47 (546)
479 3qsg_A NAD-binding phosphogluc 81.6 2.9 9.9E-05 38.5 6.9 33 133-165 24-57 (312)
480 3dhn_A NAD-dependent epimerase 81.6 1.2 4.1E-05 38.5 4.1 35 134-168 5-40 (227)
481 3evt_A Phosphoglycerate dehydr 81.5 1.9 6.7E-05 40.0 5.7 36 132-167 136-171 (324)
482 3pdu_A 3-hydroxyisobutyrate de 81.5 1 3.6E-05 40.9 3.8 34 134-167 2-35 (287)
483 1zcj_A Peroxisomal bifunctiona 81.4 1.4 4.9E-05 43.1 4.9 35 133-167 37-71 (463)
484 3o38_A Short chain dehydrogena 81.4 1.3 4.4E-05 39.5 4.3 35 132-166 21-57 (266)
485 3fmw_A Oxygenase; mithramycin, 81.3 1.1 3.8E-05 45.2 4.2 47 54-100 156-207 (570)
486 2h88_A Succinate dehydrogenase 81.3 0.92 3.1E-05 46.3 3.6 49 53-101 162-218 (621)
487 2pv7_A T-protein [includes: ch 81.3 1.5 5.3E-05 40.0 4.9 34 133-166 21-55 (298)
488 2y0c_A BCEC, UDP-glucose dehyd 81.3 1.4 4.9E-05 43.4 4.9 35 132-166 7-41 (478)
489 1lu9_A Methylene tetrahydromet 81.3 1.8 6.3E-05 39.3 5.4 34 132-165 118-152 (287)
490 3don_A Shikimate dehydrogenase 81.2 1.2 4.1E-05 40.5 4.0 36 132-167 116-152 (277)
491 3obb_A Probable 3-hydroxyisobu 81.2 4.1 0.00014 37.3 7.7 32 134-165 4-35 (300)
492 2ydy_A Methionine adenosyltran 81.2 1.6 5.3E-05 39.9 4.9 34 133-166 2-36 (315)
493 1j6u_A UDP-N-acetylmuramate-al 81.2 0.45 1.5E-05 46.9 1.2 73 134-238 16-88 (469)
494 3g0o_A 3-hydroxyisobutyrate de 81.2 1.6 5.6E-05 39.9 5.0 34 133-166 7-40 (303)
495 2d0i_A Dehydrogenase; structur 81.0 1.5 5.3E-05 40.9 4.8 35 132-166 145-179 (333)
496 2ewd_A Lactate dehydrogenase,; 81.0 1.5 5.2E-05 40.5 4.8 35 133-167 4-39 (317)
497 3rkr_A Short chain oxidoreduct 81.0 3.3 0.00011 36.8 6.9 35 132-166 28-63 (262)
498 2gmh_A Electron transfer flavo 81.0 2.3 7.8E-05 43.0 6.4 47 54-100 152-217 (584)
499 3d64_A Adenosylhomocysteinase; 81.0 1.7 5.7E-05 42.9 5.2 35 132-166 276-310 (494)
500 2dkn_A 3-alpha-hydroxysteroid 80.9 1.9 6.5E-05 37.8 5.2 34 134-167 2-36 (255)
No 1
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.8e-56 Score=437.89 Aligned_cols=372 Identities=29% Similarity=0.477 Sum_probs=332.3
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeC
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN 82 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~ 82 (414)
+++||||++++++||+||+|++.++.+.. ...++ ..+..+++.+.+++++. ++|+.++++.+.|.++
T Consensus 26 ~~~V~lie~~~~~~y~~~~l~~~~l~~~~-~~~~~-----------~~~~~~~~~~~~i~~~~-~~v~~id~~~~~v~~~ 92 (404)
T 3fg2_P 26 PGRIALINDEKHLPYQRPPLSKAYLKSGG-DPNSL-----------MFRPEKFFQDQAIELIS-DRMVSIDREGRKLLLA 92 (404)
T ss_dssp CSCEEEECCSSSSSBCSGGGGTGGGGSCC-CTTSS-----------BSSCHHHHHHTTEEEEC-CCEEEEETTTTEEEES
T ss_pred CCCEEEEeCCCCCCCCCccCCHHHHCCCC-CHHHc-----------cCCCHHHHHhCCCEEEE-EEEEEEECCCCEEEEC
Confidence 56899999999999999999998887632 23333 35788999999999999 8999999999999999
Q ss_pred CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEE
Q 014997 83 SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTII 162 (414)
Q Consensus 83 ~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv 162 (414)
+|+++.||+||+|||++|+. |.++|.+.++++++++..++..+...+..+++++|||+|++|+|+|..|+++|.+|+++
T Consensus 93 ~g~~~~~d~lvlAtG~~p~~-~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv 171 (404)
T 3fg2_P 93 SGTAIEYGHLVLATGARNRM-LDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVV 171 (404)
T ss_dssp SSCEEECSEEEECCCEEECC-CCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEECCEEEEeeCCCccC-CCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEE
Confidence 99999999999999998864 55678778899999999999999888888999999999999999999999999999999
Q ss_pred eeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 163 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
++.++++++.+++++.+.+.+.+++.||++++++.|+++..+ ++.+..|.+++|++++||.||+|+|++|+.++++++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 172 ELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp CSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTT
T ss_pred eCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCC
Confidence 999999988899999999999999999999999999999854 4667789999999999999999999999999999999
Q ss_pred CcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccCCC
Q 014997 243 LNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYE 322 (414)
Q Consensus 243 l~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~~~~~~~ 322 (414)
+..++ +|.||++++|+.|+|||+|||+..+.+..|...++++|.+|..||+.+|+||++. ..+|..+||||+++|+..
T Consensus 251 l~~~~-Gi~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~-~~~~~~~p~~~~~~~~~~ 328 (404)
T 3fg2_P 251 LPTAA-GIIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGD-AKPYDGYPWFWSDQGDDK 328 (404)
T ss_dssp CCBSS-SEEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTC-CCCCCCCCEEEEEETTEE
T ss_pred CCCCC-CEEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCC-CCCCCCCCceEeEECCcE
Confidence 99874 5999999999999999999999988777788888999999999999999999974 467999999999999864
Q ss_pred CCCcceeeeEeecCCC--cEEEEcCCC-CcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHhCCCCCChhhhcCCCcHHH
Q 014997 323 GSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVDKAKLQQASSVEE 399 (414)
Q Consensus 323 g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 399 (414)
++++|.... +.+.+++.+ .+|.++|+++|+|+|+++ +|+++++..+++||+.+..+++..|.++..-..
T Consensus 329 -------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 400 (404)
T 3fg2_P 329 -------LQIVGLTAGFDQVVIRGSVAERSFSAFCYKAGKLIGIES-VNRAADHVFGRKILPLDKSVTPEQAADLSFDLK 400 (404)
T ss_dssp -------EEEEECCTTCCEEEEEEETTTTEEEEEEEETTEEEEEEE-ESCHHHHHHHHHHTTTTCCCCHHHHHCTTSCHH
T ss_pred -------EEEEeCCCCCCEEEEEecCCCCcEEEEEEECCEEEEEEE-eCCHHHHHHHHHHHHcCCCCCHHHhcCCCCChH
Confidence 899997643 566677764 689999999999999996 899999999999999999999988888776443
No 2
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=5.3e-56 Score=440.62 Aligned_cols=370 Identities=29% Similarity=0.509 Sum_probs=330.8
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeC
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN 82 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~ 82 (414)
+++||||++++++||+||+|++.++.+. ....++ ..+..+++.+.+++++++++|+.+|++.+.|.++
T Consensus 34 ~~~V~lie~~~~~~y~~~~l~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~ 101 (415)
T 3lxd_A 34 EGRVLVIGREPEIPYERPPLSKEYLARE-KTFERI-----------CIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLG 101 (415)
T ss_dssp CSCEEEEESSSSCCBCSGGGGTTTTTTS-SCSGGG-----------BSSCHHHHHHTTEEEEETCCEEEEETTTTEEEET
T ss_pred CCCEEEEecCCCCCcCcccCCHHHHcCC-CCHHHh-----------ccCCHHHHHHCCcEEEeCCEEEEEECCCCEEEEC
Confidence 4679999999999999999999787653 222222 3577899999999999999999999999999999
Q ss_pred CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC-CCeEEEECCChHHHHHHHHHHhCCCcEEE
Q 014997 83 SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK-AKKVVVVGGGYIGMEVAAAAVGWKLDTTI 161 (414)
Q Consensus 83 ~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~-~~~vvVvGgG~~g~e~A~~l~~~g~~Vtl 161 (414)
+|+.+.||+||||||++|+. |.++|.+.++++++++.+++..+...+.. +++++|||+|++|+|+|..|+++|.+|++
T Consensus 102 ~g~~~~~d~lvlAtG~~~~~-~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtv 180 (415)
T 3lxd_A 102 DGSAIEYGKLIWATGGDPRR-LSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTL 180 (415)
T ss_dssp TSCEEEEEEEEECCCEECCC-CBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEeeEEEEccCCccCC-CCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 99999999999999999874 55678777899999999999998887777 99999999999999999999999999999
Q ss_pred EeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhc
Q 014997 162 IFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV 241 (414)
Q Consensus 162 v~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~ 241 (414)
+++.++++++.+++.+.+.+.+.+++.||++++++.|+++..+ ++.+..|.+++|++++||.||+|+|.+|++++++.+
T Consensus 181 v~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~ 259 (415)
T 3lxd_A 181 LEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISA 259 (415)
T ss_dssp EESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHT
T ss_pred EecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhC
Confidence 9999999988899999999999999999999999999999854 567778999999999999999999999999999999
Q ss_pred CCcccCCCEEEcCCCCCCCCcEEEEccccccCCccC-CcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccC
Q 014997 242 GLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY-DRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFE 320 (414)
Q Consensus 242 gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~-~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~~~~~ 320 (414)
|+..+ ++|.||++++|+.|+|||+|||+..+.... |...++++|.+|..||+.+|+||++. ..+|..+||||+++|+
T Consensus 260 gl~~~-~gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~-~~~~~~~p~~~~~~~~ 337 (415)
T 3lxd_A 260 GASGG-NGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGA-PVPYKATPWFWSNQYD 337 (415)
T ss_dssp TCCCS-SSEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTC-CCCCCCCCEEEEEETT
T ss_pred CCCcC-CCEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCC-CCCCCCCCeeEeeeCC
Confidence 99887 569999999999999999999999887666 77888999999999999999999974 4679999999999998
Q ss_pred CCCCCcceeeeEeecCCC--cEEEEcCCC-CcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHhCCCCCChhhhcCCCc
Q 014997 321 YEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVDKAKLQQASS 396 (414)
Q Consensus 321 ~~g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 396 (414)
.. ++++|...+ +.+.+++.+ .+|.++|+++|+|+|+++ +|+++++..+++||+.+..+++..|.++..
T Consensus 338 ~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 408 (415)
T 3lxd_A 338 LK-------LQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC-VNMVKDYVQGKKLVEARAQIAPEQLADAGV 408 (415)
T ss_dssp EE-------EEEEECCTTCSEEEEEEEGGGTEEEEEEEETTEEEEEEE-ESCHHHHHHHHHHHHHTCCCCHHHHTCTTS
T ss_pred cE-------EEEEeCCCCCCEEEEEecCCCCeEEEEEEECCEEEEEEE-ECChHHHHHHHHHHHCCCCCCHHHhcCCCC
Confidence 64 899997643 566677764 689999999999999996 899999999999999999999988887765
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=7.8e-56 Score=438.60 Aligned_cols=368 Identities=27% Similarity=0.453 Sum_probs=327.0
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeC
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN 82 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~ 82 (414)
+++||||++++++||+||+|++.++.+... ...+ .+..+++++.+++++++++|+.+|++.+.|.+.
T Consensus 27 ~~~V~li~~~~~~~y~~~~l~~~~~~g~~~-~~~~------------~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~ 93 (410)
T 3ef6_A 27 EGRISLIGDEPHLPYDRPSLSKAVLDGSLE-RPPI------------LAEADWYGEARIDMLTGPEVTALDVQTRTISLD 93 (410)
T ss_dssp CSEEEEEECSSSSSBCSGGGGTHHHHTSSS-SCCB------------SSCTTHHHHTTCEEEESCCEEEEETTTTEEEET
T ss_pred CCeEEEEECCCCCCcCCccccHHHhCCCCC-HHHh------------cCCHHHHHHCCCEEEeCCEEEEEECCCCEEEEC
Confidence 568999999999999999999987765322 2211 356789999999999999999999999999999
Q ss_pred CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEE
Q 014997 83 SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTII 162 (414)
Q Consensus 83 ~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv 162 (414)
+|+++.||+||||||++|+. |.++|.+.++++++++..++..+...+..+++++|||+|++|+|+|..|+++|.+|+++
T Consensus 94 ~g~~~~~d~lvlAtG~~p~~-~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv 172 (410)
T 3ef6_A 94 DGTTLSADAIVIATGSRART-MALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTIL 172 (410)
T ss_dssp TSCEEECSEEEECCCEEECC-CCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEECCEEEEccCCcccC-CCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 99999999999999999874 55678778899999999999999888888999999999999999999999999999999
Q ss_pred eeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 163 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
++.++++++.+++++.+.+.+.+++.||++++++.|++++.+ +.+..+.+++|++++||.||+|+|.+|++++++++|
T Consensus 173 ~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~g 250 (410)
T 3ef6_A 173 EAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAEPADQLARQAG 250 (410)
T ss_dssp CSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTT
T ss_pred ecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCC
Confidence 999999987889999999999999999999999999999853 345578999999999999999999999999999999
Q ss_pred CcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccCCC
Q 014997 243 LNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYE 322 (414)
Q Consensus 243 l~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~~~~~~~ 322 (414)
+..+ ++|.||++++|+.|+|||+|||+.++... |...++++|..|..||+.+|+||++. ..+|..+||||+++|++.
T Consensus 251 l~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g~-~~~~~~~p~~~~~~~~~~ 327 (410)
T 3ef6_A 251 LACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILGK-NVSAPQLPVSWTEIAGHR 327 (410)
T ss_dssp CCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTTC-CCCCCBCCEEEEEETTEE
T ss_pred CccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcCC-CCCCCCCCeeEEEECCce
Confidence 9987 57999999999999999999999987655 77777889999999999999999974 467899999999999864
Q ss_pred CCCcceeeeEeecCCC--cEEEEcCCC-CcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHhCCCCCChhhhcCCCcH
Q 014997 323 GSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVDKAKLQQASSV 397 (414)
Q Consensus 323 g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 397 (414)
++++|...+ +.+.+++.+ ..|.+||+++|+|+|+++ +|+++++..+++||+.+..+++..|.++..-
T Consensus 328 -------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~ 397 (410)
T 3ef6_A 328 -------MQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVA-VDAPRDFALATRLVEARAAIEPARLADLSNS 397 (410)
T ss_dssp -------EEEESCSSSSSEEEEESCTTSSSEEEEEEETTEEEEEEE-ESCHHHHHHHHHHHHHTCBCCHHHHHCTTSC
T ss_pred -------EEEEcCCCCCCEEEEEeeCCCCeEEEEEEECCEEEEEEE-ECChHHHHHHHHHHhCCCCCCHHHhcCCCCC
Confidence 888997653 566777765 679999999999999997 8999999999999999999999888877653
No 4
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.3e-53 Score=416.82 Aligned_cols=349 Identities=21% Similarity=0.300 Sum_probs=301.2
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
++++||||++|+++||+||+||+ ++.+. ...+++ ..+..+++++++|+++++++|+.||+++++|++
T Consensus 31 ~~~~itlie~~~~~~y~~~~l~~-~l~g~-~~~~~l-----------~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~ 97 (385)
T 3klj_A 31 KCDDITMINSEKYLPYYRPRLNE-IIAKN-KSIDDI-----------LIKKNDWYEKNNIKVITSEFATSIDPNNKLVTL 97 (385)
T ss_dssp TCSCEEEECSSSSCCBCGGGHHH-HHHSC-CCGGGT-----------BSSCHHHHHHTTCEEECSCCEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCCCCcccChhhH-HHcCC-CCHHHc-----------cCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEE
Confidence 57899999999999999999998 56552 222333 467889999999999999999999999999999
Q ss_pred CCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEE
Q 014997 82 NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTI 161 (414)
Q Consensus 82 ~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtl 161 (414)
++|+++.||+||||||++|+. |.++|.+ +++++++.+++..+...+..+++++|||+|++|+|+|..|+++|.+||+
T Consensus 98 ~~g~~~~yd~lvlAtG~~p~~-p~i~G~~--~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtv 174 (385)
T 3klj_A 98 KSGEKIKYEKLIIASGSIANK-IKVPHAD--EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASI 174 (385)
T ss_dssp TTSCEEECSEEEECCCEEECC-CCCTTCS--CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEECCEEEEecCCCcCC-CCCCCCC--CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 999999999999999999874 5567755 8999999999999888777789999999999999999999999999999
Q ss_pred EeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhc
Q 014997 162 IFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV 241 (414)
Q Consensus 162 v~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~ 241 (414)
+++.++++++.+++++.+.+.+.+++.||++++++.++++ |++++||.||+++|++|++++++++
T Consensus 175 v~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~p~~~~~~~~ 239 (385)
T 3klj_A 175 GIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKPNLDFIKDT 239 (385)
T ss_dssp ECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEEECCGGGTTS
T ss_pred EEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEECcCcccChhhhhhc
Confidence 9999999998899999999999999999999999877655 4578999999999999999999999
Q ss_pred CCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCC-CCceeeeccC
Q 014997 242 GLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDY-LPYFYSRVFE 320 (414)
Q Consensus 242 gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~-~p~~~~~~~~ 320 (414)
|+..+ ++|.||++++|+.|+|||+|||+.++... ..+|..|..||+.||+||++. ..+|.. +|++|+++|+
T Consensus 240 gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~~aa~~i~g~-~~~~~~~~~~~~~~~~~ 311 (385)
T 3klj_A 240 EIASK-RGILVNDHMETSIKDIYACGDVAEFYGKN------PGLINIANKQGEVAGLNACGE-DASYSEIIPSPILKVSG 311 (385)
T ss_dssp CCCBS-SSEEECTTCBCSSTTEEECGGGEEETTBC------CCCHHHHHHHHHHHHHHHTTC-CCCCCCCCCCCEEEETT
T ss_pred CCCcC-CCEEECCCcccCCCCEEEEEeeEecCCCc------ccHHHHHHHHHHHHHHHhcCC-CcCCCCCCCcEEEEeCC
Confidence 99887 46999999999999999999999876532 237889999999999999974 456765 6999999998
Q ss_pred CCCCCcceeeeEeecCCC---cEEEEcCCCCcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHhCCCCCChhhhcCCCcH
Q 014997 321 YEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVDKAKLQQASSV 397 (414)
Q Consensus 321 ~~g~~~~~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 397 (414)
.. ++++|.... +.+.+...+..|.++|+++|+|+|+++ +|+......++++|+++.++++- +++
T Consensus 312 ~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~g~~~~~~~~~~~i~~~~~~~~~-----~~~ 378 (385)
T 3klj_A 312 IS-------IISCGDIENNKPSKVFRSTQEDKYIVCMLKENKIDAAAV-IGDVSLGTKLKKAIDSSKSFDNI-----SSL 378 (385)
T ss_dssp EE-------EEEESCCTTCCCSEEEEEECSSCEEEEEEETTEEEEEEE-ESCHHHHHHHHHHHHTTCBCSCC-----SCH
T ss_pred Cc-------EEEEcCCCCCCCeEEEEECCCCeEEEEEEECCEEEEEEE-ECCcHHHHHHHHHHHcCCCcccc-----cCH
Confidence 64 788887653 334442224679999999999999997 79998888999999999877655 888
Q ss_pred HHHHH
Q 014997 398 EEALE 402 (414)
Q Consensus 398 ~~~~~ 402 (414)
+|.+.
T Consensus 379 ~E~~~ 383 (385)
T 3klj_A 379 DAILN 383 (385)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88775
No 5
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=2.3e-51 Score=408.90 Aligned_cols=376 Identities=28% Similarity=0.480 Sum_probs=322.5
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeC
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN 82 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~ 82 (414)
+++|+||++++..||+||++++.++.+. .....+ ..+..+++++.+|+++++++|+.++++.+.|.++
T Consensus 29 ~~~V~lie~~~~~~~~~~~l~~~~~~~~-~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~ 96 (431)
T 1q1r_A 29 EGNIRLVGDATVIPHHLPPLSKAYLAGK-ATAESL-----------YLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILS 96 (431)
T ss_dssp CSEEEEECSCCSCCBCSGGGGTTTTTTC-SCSGGG-----------BSSCHHHHHHTTEEEECSCCEEEEETTTTEEEET
T ss_pred CCCEEEEECCCCCCCcCCCCcHHHhCCC-CChHHh-----------cccCHHHHHhCCCEEEeCCEEEEEECCCCEEEEC
Confidence 4589999999999999999999777652 222222 2456788999999999999999999999999999
Q ss_pred CCcEEecCeEEEccCCCCCCCCCCCCCCCCC---EEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcE
Q 014997 83 SGKLLKYGSLIVATGCTASRFPEKIGGYLPG---VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDT 159 (414)
Q Consensus 83 ~g~~~~yd~LviAtG~~~~~~~~~~g~~~~g---v~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~V 159 (414)
+|+++.||+||+|||++|+. |.++|.+.++ ++++++.+++..+...+..+++++|||+|++|+|+|..|+++|.+|
T Consensus 97 ~g~~~~~d~lviAtG~~p~~-~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~V 175 (431)
T 1q1r_A 97 DGRALDYDRLVLATGGRPRP-LPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHV 175 (431)
T ss_dssp TSCEEECSEEEECCCEEECC-CGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEECCEEEEcCCCCccC-CCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEE
Confidence 99899999999999999864 5556755556 9999999999888887778999999999999999999999999999
Q ss_pred EEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEec-CCCcEEEEEeCCCcEEecCEEEEccCCcCCChhh
Q 014997 160 TIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG-SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 238 (414)
Q Consensus 160 tlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~-~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l 238 (414)
+++++.++++++.+++++.+.+.+.+++.||++++++.|+++... +++.+..+.+.+|++++||.||+|+|.+|+++++
T Consensus 176 tlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~ 255 (431)
T 1q1r_A 176 TLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELA 255 (431)
T ss_dssp EEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHH
T ss_pred EEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchh
Confidence 999999999987789999999999999999999999999999852 3466667889999999999999999999999999
Q ss_pred hhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeec
Q 014997 239 ERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRV 318 (414)
Q Consensus 239 ~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~~~ 318 (414)
+++|+..+ ++|.||++++|+.|+|||+|||+..+.+..|...++++|..|..||+.+|+||++. ..+|+.+||+|+++
T Consensus 256 ~~~gl~~~-~gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~-~~~~~~~p~~~~~~ 333 (431)
T 1q1r_A 256 SAAGLQVD-NGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGK-VPRDEAAPWFWSDQ 333 (431)
T ss_dssp HHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTC-CCCCCCCCEEEEEE
T ss_pred hccCCCCC-CCEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCC-CCCCCCCCeEEEEE
Confidence 99999887 46999999999999999999999987666677777889999999999999999974 45788899999999
Q ss_pred cCCCCCCcceeeeEeecCCC--cEEEEcCCC-CcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHhCCCCCChhhhcCCC
Q 014997 319 FEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVDKAKLQQAS 395 (414)
Q Consensus 319 ~~~~g~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 395 (414)
|+.. ++++|.... +.+..++.+ ..|.+++.++++|+|+++ +|.......++.++..+..++..+|.++.
T Consensus 334 ~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g~~~~~~~~~~~i~~~~~~~~~~l~~~~ 405 (431)
T 1q1r_A 334 YEIG-------LKMVGLSEGYDRIIVRGSLAQPDFSVFYLQGDRVLAVDT-VNRPVEFNQSKQIITDRLPVEPNLLGDES 405 (431)
T ss_dssp TTEE-------EEEEECCTTCSEEEEEEETTTTEEEEEEEETTEEEEEEE-ESCHHHHHHHHHHHHTTCCCCHHHHTCTT
T ss_pred CCce-------EEEEeCCCCCCEEEEEccCCCCeEEEEEEeCCEEEEEEE-ECChHHHHHHHHHHHCCCCCCHHHhhCCC
Confidence 8753 778886543 345566654 468888889999999997 78888999999999999999998887776
Q ss_pred cHHHHH
Q 014997 396 SVEEAL 401 (414)
Q Consensus 396 ~~~~~~ 401 (414)
.....+
T Consensus 406 ~~~~~~ 411 (431)
T 1q1r_A 406 VPLKEI 411 (431)
T ss_dssp SCHHHH
T ss_pred CCHHHH
Confidence 554444
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=4.4e-51 Score=404.16 Aligned_cols=367 Identities=26% Similarity=0.409 Sum_probs=313.0
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeC
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN 82 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~ 82 (414)
+++|+||+++++.||.+|++++.++.+.. ..++ .++ ++++.+++++++++|+.++++.++|+++
T Consensus 32 ~~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~-----------~~~---~~~~~~v~~~~~~~v~~i~~~~~~v~~~ 95 (408)
T 2gqw_A 32 QGLITVVGDEAERPYDRPPLSKDFMAHGD--AEKI-----------RLD---CKRAPEVEWLLGVTAQSFDPQAHTVALS 95 (408)
T ss_dssp CSCEEEEESSCSCCBCSGGGGTHHHHHCC--GGGS-----------BCC---CTTSCSCEEEETCCEEEEETTTTEEEET
T ss_pred CCeEEEEECCCCCcccCCCCCHHHhCCCc--hhhh-----------hHH---HHHHCCCEEEcCCEEEEEECCCCEEEEC
Confidence 46799999999999999999987765422 2221 122 5677899999998899999999999999
Q ss_pred CCcEEecCeEEEccCCCCCCCCCC-CCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEE
Q 014997 83 SGKLLKYGSLIVATGCTASRFPEK-IGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTI 161 (414)
Q Consensus 83 ~g~~~~yd~LviAtG~~~~~~~~~-~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtl 161 (414)
+|+++.||+||||||++|+. |++ +|.+ ++++++++.+++..+...+..+++++|||+|++|+|+|..|+++|.+|++
T Consensus 96 ~g~~~~~d~lviAtG~~~~~-~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 173 (408)
T 2gqw_A 96 DGRTLPYGTLVLATGAAPRA-LPTLQGAT-MPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSL 173 (408)
T ss_dssp TSCEEECSEEEECCCEEECC-CGGGTTCS-SCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEECCEEEECCCCCCCC-CCccCCCC-CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 99899999999999999864 555 6766 78999999999988887777789999999999999999999999999999
Q ss_pred EeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhc
Q 014997 162 IFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV 241 (414)
Q Consensus 162 v~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~ 241 (414)
+++.++++++.+++++.+.+.+.+++.||++++++.|++++ + + .+.+.+|++++||.||+|+|.+|++++++++
T Consensus 174 v~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~ 247 (408)
T 2gqw_A 174 VETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVLANDALARAA 247 (408)
T ss_dssp EESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEEECCHHHHHH
T ss_pred EEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCCccHHHHHhC
Confidence 99999999877899999999999999999999999999997 2 3 5778899999999999999999999999999
Q ss_pred CCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccCC
Q 014997 242 GLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEY 321 (414)
Q Consensus 242 gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~~~~~~ 321 (414)
|++.++ +|.||+++||+.|+|||+|||+..+.+..|...+.++|..|..||+.+|+||++....+|..+||+|+++|+.
T Consensus 248 gl~~~~-gi~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~p~~~~~~~~~ 326 (408)
T 2gqw_A 248 GLACDD-GIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGAL 326 (408)
T ss_dssp TCCBSS-SEECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTSCCCCCCCEEEEEETTE
T ss_pred CCCCCC-CEEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCCCcCCCCCeEEEEECCc
Confidence 998874 5999999999999999999999987655566666779999999999999999974432788899999999976
Q ss_pred CCCCcceeeeEeec-CCCcEEEEcCCC---CcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHhCCCCCChhhhcCCCcH
Q 014997 322 EGSPRKVWWQFFGD-NVGETIEIGNFD---PKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVDKAKLQQASSV 397 (414)
Q Consensus 322 ~g~~~~~~~~~~G~-~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 397 (414)
. ++++|. ...+.+..++.. ..|.++|.++++|+|+++ ++...++..++.+|+.+..+++..+.++...
T Consensus 327 ~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g~~~~~~~~~~~i~~~~~~~~~~l~~~~~~ 398 (408)
T 2gqw_A 327 R-------IQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATC-VNNARDFAPLRRLLAVGAKPDRAALADPATD 398 (408)
T ss_dssp E-------EEEEECSCCSEEEEESCCCSSSCCEEEEEEETTEEEEEEE-ESCHHHHHHHHHHHHTTCCCCHHHHHCTTCC
T ss_pred e-------EEEECCCCCCEEEEEccCCCCCCeEEEEEEeCCEEEEEEE-ECChHHHHHHHHHHHCCCCCChHHhcCCCCC
Confidence 4 778886 222455566643 468889999999999997 7888888999999999999999888887765
Q ss_pred HHHHH
Q 014997 398 EEALE 402 (414)
Q Consensus 398 ~~~~~ 402 (414)
...+.
T Consensus 399 ~~~~~ 403 (408)
T 2gqw_A 399 LRKLA 403 (408)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 54443
No 7
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=4.3e-49 Score=398.84 Aligned_cols=379 Identities=22% Similarity=0.354 Sum_probs=290.9
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCC---CCCCCccccCCCCCCCCHhHH---------HHcCCeEEcCCcE
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPA---RLPGFHTCVGSGGERQTPEWY---------KEKGIEMIYQDPV 69 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~---~l~~~~~~~g~~~~~~~~~~~---------~~~~i~~~~~~~V 69 (414)
+..+|+||++++++||.||+|||.++.+...... .+++++... ..+.+++.+++ .+.+|+++++++|
T Consensus 35 ~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~gv~~~~g~~v 113 (493)
T 1m6i_A 35 PGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKE-RSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKV 113 (493)
T ss_dssp TTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCE-EESBSSCGGGSBCTTTTTTSTTCEEEEEETCCE
T ss_pred CCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhccccccccccc-ccccccchHhhcchhhhhhhhcCCeEEEcCCEE
Confidence 4689999999999999999999987765221000 000000000 00011222222 2578999999999
Q ss_pred EEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCC----CCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHH
Q 014997 70 TSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIG 145 (414)
Q Consensus 70 ~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~----~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g 145 (414)
+.||++.++|++++|+++.||+||||||++|+.+| .++.. .++++++++..++..+...+..+++++|||+|++|
T Consensus 114 ~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~-~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG 192 (493)
T 1m6i_A 114 VQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLS-AIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLG 192 (493)
T ss_dssp EEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCH-HHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHH
T ss_pred EEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC-CcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHH
Confidence 99999999999999999999999999999987544 23321 35788999999998888777789999999999999
Q ss_pred HHHHHHHHh----CCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEe
Q 014997 146 MEVAAAAVG----WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 221 (414)
Q Consensus 146 ~e~A~~l~~----~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~ 221 (414)
+|+|..|++ .|.+|+++++.+.++.+.+++.+.+.+.+.++++||++++++.|++++.+ ++.+ .+.+.+|++++
T Consensus 193 ~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~ 270 (493)
T 1m6i_A 193 SELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVE 270 (493)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEE
T ss_pred HHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEE
Confidence 999999876 47899999998888887889999999999999999999999999999753 3333 68889999999
Q ss_pred cCEEEEccCCcCCChhhhhcCCccc--CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHH
Q 014997 222 ADTIVIGIGAKPTVSPFERVGLNSS--VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKA 299 (414)
Q Consensus 222 ~D~vi~a~G~~p~~~~l~~~gl~~~--~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~ 299 (414)
||.||+|+|.+||+++++++|++.+ +|+|.||++||| .|+|||+|||+..+....|.. ++++|.+|..||+.||+|
T Consensus 271 aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~-~~~~~~~A~~qg~~aa~n 348 (493)
T 1m6i_A 271 TDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRR-RVEHHDHAVVSGRLAGEN 348 (493)
T ss_dssp ESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEEEETTTEEE-CCCCHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEeccCcccCcc-ccchHHHHHHHHHHHHHH
Confidence 9999999999999999999999876 379999999998 699999999999776555543 577999999999999999
Q ss_pred HhcCCCCCCCCCCceeeeccCCCCCCc----ceeeeEeecCCC-----c------------------------EEEE---
Q 014997 300 LLSAQTHTYDYLPYFYSRVFEYEGSPR----KVWWQFFGDNVG-----E------------------------TIEI--- 343 (414)
Q Consensus 300 i~~~~~~~~~~~p~~~~~~~~~~g~~~----~~~~~~~G~~~~-----~------------------------~~~~--- 343 (414)
|++ ...+|.+.||||++++...+... ...++++|.... . ....
T Consensus 349 i~g-~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (493)
T 1m6i_A 349 MTG-AAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPST 427 (493)
T ss_dssp HTS-CCCCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHHHHHHHSCSCHHHHSCSCCCC--------
T ss_pred hcC-CCCCcCCcCceeeeeccCcceEEEeccCCCcceEEeeccccccccccccccccccccccccccccccccccccccc
Confidence 996 45689999999999983211000 001333432100 0 0000
Q ss_pred -c-------C-CCCcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHhCCCCCCh
Q 014997 344 -G-------N-FDPKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVDK 388 (414)
Q Consensus 344 -~-------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 388 (414)
| + ...+|.+||+++|+|+|+++ +|+++++..+++||+.+..+++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~li~~~~~~~~ 480 (493)
T 1m6i_A 428 PAVPQAPVQGEDYGKGVIFYLRDKVVVGIVL-WNIFNRMPIARKIIKDGEQHED 480 (493)
T ss_dssp ------------CCEEEEEEEETTEEEEEEE-ESCCSCHHHHHHHHHHCCBCSC
T ss_pred ccccccccccccCCcEEEEEEeCCEEEEEEE-ecCcchHHHHHHHHhCCCCCCC
Confidence 1 1 12567889999999999996 8999999999999988887655
No 8
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2e-45 Score=358.52 Aligned_cols=332 Identities=23% Similarity=0.396 Sum_probs=266.1
Q ss_pred CcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeCC
Q 014997 4 GRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS 83 (414)
Q Consensus 4 g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~ 83 (414)
|+|+||+++++.+|.||+|++ ++.+. ....++ ..+..+++++.+|+++++++|+.+|++.++|+ .+
T Consensus 31 g~V~lie~~~~~~~~~~~l~~-~~~g~-~~~~~~-----------~~~~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~ 96 (367)
T 1xhc_A 31 YEVTVIDKEPVPYYSKPMLSH-YIAGF-IPRNRL-----------FPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TE 96 (367)
T ss_dssp SEEEEECSSSSCCCCSTTHHH-HHTTS-SCGGGG-----------CSSCHHHHHHHTEEEECSCCEEEEETTTTEEE-ES
T ss_pred CCEEEEECCCCCccccchhHH-HHhCC-CCHHHh-----------ccCCHHHHHhCCcEEEECCEEEEEECCCCEEE-EC
Confidence 389999999999999999987 55442 222222 34567889999999999989999999999988 67
Q ss_pred CcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEe
Q 014997 84 GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 163 (414)
Q Consensus 84 g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~ 163 (414)
|+++.||+||||||++|+. |.++| .++++++++..++..+.+.+.++++++|||+|++|+|+|..|+++|.+||+++
T Consensus 97 g~~~~~d~lViATGs~p~~-p~i~G--~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~ 173 (367)
T 1xhc_A 97 KGEVPYDTLVLATGARARE-PQIKG--KEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIH 173 (367)
T ss_dssp SCEEECSEEEECCCEEECC-CCSBT--GGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcEEECCEEEECCCCCCCC-CCCCC--cCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 8889999999999999874 55566 56788888999888887766667999999999999999999999999999999
Q ss_pred eCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCC
Q 014997 164 PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGL 243 (414)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl 243 (414)
+.+++++ +++++.+.+.+.+++.||+++++++|++++.+ .+.+++|+ +++|.|++|+|++|++++++++++
T Consensus 174 ~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~------~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl 244 (367)
T 1xhc_A 174 RGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEANEE------GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGI 244 (367)
T ss_dssp SSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEECSS------EEEETTEE-EECSCEEEECCEEECCHHHHHTTC
T ss_pred CCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEee------EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCC
Confidence 9999987 89999999999999999999999999999621 57788887 999999999999999999999999
Q ss_pred cccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceee-eccCCC
Q 014997 244 NSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYS-RVFEYE 322 (414)
Q Consensus 244 ~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~-~~~~~~ 322 (414)
+.+ ++|.||+++||+.|+|||+|||+...... ...|..|..||+.+|+||++. ..+|+..+++|+ .+++.
T Consensus 245 ~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~~aa~~i~g~-~~~~~~~~~~~~~~~~~~- 315 (367)
T 1xhc_A 245 HTG-RGILIDDNFRTSAKDVYAIGDCAEYSGII------AGTAKAAMEQARVLADILKGE-PRRYNFKFRSTVFKFGKL- 315 (367)
T ss_dssp CBS-SSEECCTTSBCSSTTEEECGGGEEBTTBC------CCSHHHHHHHHHHHHHHHTTC-CCCCCSSCCEEEEEETTE-
T ss_pred CCC-CCEEECCCcccCCCCEEEeEeeeecCCCC------ccHHHHHHHHHHHHHHHhcCC-CccCCCCCCceEEEECCc-
Confidence 887 56999999999999999999999764321 126888999999999999964 356666555544 44443
Q ss_pred CCCcceeeeEeecCCCcEEEEcCCCCcEEEEEEeCCEEEEEEeecCChHHhhHHHHHHh
Q 014997 323 GSPRKVWWQFFGDNVGETIEIGNFDPKIATFWIDSGKLKGVLVESGSPEEFQLLPTLAR 381 (414)
Q Consensus 323 g~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~ 381 (414)
.++.+|....+.... ..|.++++++++|+|+++ ++.......++++|.
T Consensus 316 ------~~~~vG~~~~~~~~~----~~~~k~~~~~~~ilG~~~-~g~~~~~~~~~~~i~ 363 (367)
T 1xhc_A 316 ------QIAIIGNTKGEGKWI----EDNTKVFYENGKIIGAVV-FNDIRKATKLEKEIL 363 (367)
T ss_dssp ------EEEEEECCSSCEEEE----ETTEEEEC-----CEEEE-ESCHHHHHHHC----
T ss_pred ------eEEEECCCCCCCccc----ceEEEEEEECCEEEEEEE-ECChHHHHHHHHHHh
Confidence 267788765532211 236788888899999997 788888888888873
No 9
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.9e-45 Score=365.34 Aligned_cols=370 Identities=20% Similarity=0.288 Sum_probs=285.3
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
++.+|+||+++++++|.||+|++ ++.+........ +..+..+++++++|+++.+++|+.||++.+.+.+
T Consensus 24 ~~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~ 92 (437)
T 4eqs_A 24 KESDIIIFEKDRDMSFANCALPY-VIGEVVEDRRYA----------LAYTPEKFYDRKQITVKTYHEVIAINDERQTVSV 92 (437)
T ss_dssp SSSCEEEEESSSCSSBCGGGHHH-HHTTSSCCGGGT----------BCCCHHHHHHHHCCEEEETEEEEEEETTTTEEEE
T ss_pred CCCcEEEEeCCCCCCCCcchhHH-HHcCCccchhhh----------hhcCHHHHHHhcCCEEEeCCeEEEEEccCcEEEE
Confidence 35789999999999999999986 443311111111 1245567889999999999999999999998776
Q ss_pred CC-----CcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh--cCCCeEEEECCChHHHHHHHHHHh
Q 014997 82 NS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIGMEVAAAAVG 154 (414)
Q Consensus 82 ~~-----g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~--~~~~~vvVvGgG~~g~e~A~~l~~ 154 (414)
.+ +.++.||+||||||++|+. |.++ .++++++++++++..+...+ .++++++|||||++|+|+|..+++
T Consensus 93 ~~~~~~~~~~~~yd~lVIATGs~p~~-p~i~---g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~ 168 (437)
T 4eqs_A 93 LNRKTNEQFEESYDKLILSPGASANS-LGFE---SDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYE 168 (437)
T ss_dssp EETTTTEEEEEECSEEEECCCEEECC-CCCC---CTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHH
T ss_pred EeccCCceEEEEcCEEEECCCCcccc-cccc---CceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHh
Confidence 43 2368999999999999864 4333 36788899999988876654 357899999999999999999999
Q ss_pred CCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 155 WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 155 ~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
+|.+||++++.+++++ .+++++++.+.+.++++||++++++.|++++.. .+.+++|++++||.|++++|.+||
T Consensus 169 ~g~~Vtlv~~~~~ll~-~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 169 RGLHPTLIHRSDKINK-LMDADMNQPILDELDKREIPYRLNEEINAINGN------EITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp HTCEEEEEESSSCCST-TSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT------EEEETTSCEEECSEEEECCCEEES
T ss_pred cCCcceeeeeeccccc-cccchhHHHHHHHhhccceEEEeccEEEEecCC------eeeecCCeEEeeeeEEEEeceecC
Confidence 9999999999999987 589999999999999999999999999999743 678999999999999999999999
Q ss_pred ChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCC-CCC
Q 014997 235 VSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYD-YLP 312 (414)
Q Consensus 235 ~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~-~~p 312 (414)
+++++.+|+..+ +|+|.||+++||++|||||+|||+..+....+.....+.+..|.+||+.+|+||++.....+. ..+
T Consensus 242 ~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~ 321 (437)
T 4eqs_A 242 SKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLG 321 (437)
T ss_dssp CGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCC
T ss_pred cHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCccccccee
Confidence 999999999875 578999999999999999999999988877777777788999999999999999986544443 333
Q ss_pred ceeeeccCCCCCCcceeeeEeecCCCc-------EEE--EcC---C----CCcEEEEEEe--CCEEEEEEeecCC-hHHh
Q 014997 313 YFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE--IGN---F----DPKIATFWID--SGKLKGVLVESGS-PEEF 373 (414)
Q Consensus 313 ~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~--~~~---~----~~~~~~~~~~--~~~~~g~~~~~~~-~~~~ 373 (414)
..+...++. .+..+|..+.+ ... ... . ..-+.++.++ +++|+|+++++.+ ++++
T Consensus 322 ~~~~~~~~p-------~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~ 394 (437)
T 4eqs_A 322 NNIVKFFDY-------TFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKR 394 (437)
T ss_dssp CEEEEETTE-------EEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHH
T ss_pred EEeeeeccc-------eEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHH
Confidence 333333322 14455554321 111 111 0 1125677765 5899999986544 6666
Q ss_pred hH-HHHHHhCCCCCCh-hh--hcCCCcHHHH
Q 014997 374 QL-LPTLARSQPFVDK-AK--LQQASSVEEA 400 (414)
Q Consensus 374 ~~-~~~l~~~~~~~~~-~~--~~~~~~~~~~ 400 (414)
.. +..+|+.+.++++ .. +.-||+++++
T Consensus 395 i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~ 425 (437)
T 4eqs_A 395 IDVLSMAMMNQLTVDELTEFEVAFAPPYSHP 425 (437)
T ss_dssp HHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred HHHHHHHHHcCCcHHHHhcCccccCCCCCch
Confidence 54 4456799988887 33 2335666554
No 10
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=3e-44 Score=360.03 Aligned_cols=380 Identities=21% Similarity=0.272 Sum_probs=295.2
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCC--CCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEE
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDK--KPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTL 79 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V 79 (414)
+..+|+||+++++.+|.+..++. ++.+... ...++ .....+++++.+++++.+++|+.++++.+.|
T Consensus 24 ~g~~V~lie~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v 91 (452)
T 2cdu_A 24 PDADVTAYEMNDNISFLSCGIAL-YLGKEIKNNDPRGL-----------FYSSPEELSNLGANVQMRHQVTNVDPETKTI 91 (452)
T ss_dssp TTCEEEEEESSSCCCBCGGGHHH-HHTTCBGGGCGGGG-----------BSCCHHHHHHTTCEEEESEEEEEEEGGGTEE
T ss_pred cCCcEEEEECCCCCCcccccchh-hhcCCcccCCHHHh-----------hhcCHHHHHHcCCEEEeCCEEEEEEcCCCEE
Confidence 46789999999988887554432 3333111 11111 2456788899999999998999999888888
Q ss_pred EeCC-----CcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHh
Q 014997 80 ITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVG 154 (414)
Q Consensus 80 ~~~~-----g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~ 154 (414)
.+.+ ++++.||+||||||++|+ .|.++|.+.+++++++++.++..+......+++++|||+|++|+|+|..|++
T Consensus 92 ~v~~~~~g~~~~~~~d~lviAtGs~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~ 170 (452)
T 2cdu_A 92 KVKDLITNEEKTEAYDKLIMTTGSKPT-VPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSN 170 (452)
T ss_dssp EEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHT
T ss_pred EEEecCCCceEEEECCEEEEccCCCcC-CCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHh
Confidence 8754 467999999999999987 4556777667899999999999888877889999999999999999999999
Q ss_pred CCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 155 WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 155 ~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
+|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|++++.. ++.+..+.+ +|++++||.||+|+|++|+
T Consensus 171 ~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 171 QNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred cCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 99999999999999987799999999999999999999999999999853 455544555 7789999999999999999
Q ss_pred ChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 014997 235 VSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPY 313 (414)
Q Consensus 235 ~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~ 313 (414)
++++++. +..+ +|+|.||+++||+.|+|||+|||+..+....+...+.+++..|..||+.+|+||++.........|+
T Consensus 249 ~~ll~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~ 327 (452)
T 2cdu_A 249 TELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSS 327 (452)
T ss_dssp CGGGTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCC
T ss_pred HHHHHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccce
Confidence 9988777 7764 5779999999999999999999999766555555556689999999999999999743222344688
Q ss_pred eeeeccCCCCCCcceeeeEeecCCCc-------EEE-----EcC--C----CCcEEEEEEe--CCEEEEEEeecC-ChHH
Q 014997 314 FYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-----IGN--F----DPKIATFWID--SGKLKGVLVESG-SPEE 372 (414)
Q Consensus 314 ~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-----~~~--~----~~~~~~~~~~--~~~~~g~~~~~~-~~~~ 372 (414)
+|+.+|+.. ++.+|....+ ... .+. . ..-+.+++++ +++|+|++++.. ++.+
T Consensus 328 ~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~ 400 (452)
T 2cdu_A 328 SGLKLYGRT-------YVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQ 400 (452)
T ss_dssp EEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHH
T ss_pred EEEEECCee-------eEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHH
Confidence 889888643 6667754321 110 111 1 1135666664 589999998665 4555
Q ss_pred h-hHHHHHHhCCCCCChhh---hcCCCcHHHHHHHH
Q 014997 373 F-QLLPTLARSQPFVDKAK---LQQASSVEEALEIA 404 (414)
Q Consensus 373 ~-~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~ 404 (414)
+ ..+..+|+.+.++++-. +..||++.|++..+
T Consensus 401 ~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~ 436 (452)
T 2cdu_A 401 SANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFNYL 436 (452)
T ss_dssp HHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSCHH
T ss_pred HHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHHHH
Confidence 4 45667888888887733 46788888765443
No 11
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.1e-43 Score=359.28 Aligned_cols=381 Identities=17% Similarity=0.268 Sum_probs=293.9
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
++.+|+||+++++.+|.+..++. ++.+......++ .....+++++.+++++.+++|+.++++.+.|.+
T Consensus 60 ~~~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v 127 (490)
T 2bc0_A 60 DANEIVVFDQNSNISFLGAGMAL-WIGEQIAGPEGL-----------FYSDKEELESLGAKVYMESPVQSIDYDAKTVTA 127 (490)
T ss_dssp GGSEEEEECSSSCCSBCGGGHHH-HHTTSSSCSGGG-----------BSCCHHHHHHTTCEEETTCCEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCCCccccccch-hhcCccCCHHHh-----------hhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEE
Confidence 35789999999888886544332 333211111111 234578888999999999999999999898888
Q ss_pred C-CC--cEEecCeEEEccCCCCCCCCCCCCCC-----------CCCEEEecCHHHHHHHHHhh--cCCCeEEEECCChHH
Q 014997 82 N-SG--KLLKYGSLIVATGCTASRFPEKIGGY-----------LPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIG 145 (414)
Q Consensus 82 ~-~g--~~~~yd~LviAtG~~~~~~~~~~g~~-----------~~gv~~~~~~~~~~~~~~~~--~~~~~vvVvGgG~~g 145 (414)
. +| +++.||+||||||++|. .|.++|.+ .+++++++++.++..+.+.+ ..+++++|||+|++|
T Consensus 128 ~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig 206 (490)
T 2bc0_A 128 LVDGKNHVETYDKLIFATGSQPI-LPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIG 206 (490)
T ss_dssp EETTEEEEEECSEEEECCCEEEC-CCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHH
T ss_pred EeCCcEEEEECCEEEECCCCCcC-CCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHH
Confidence 6 54 47999999999999986 45567766 57899999999998888777 678999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEE
Q 014997 146 MEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTI 225 (414)
Q Consensus 146 ~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~v 225 (414)
+|+|..|+++|.+||++++.++++++.+++++.+.+.+.+++.||++++++.|+++.. ++.+..+.+ +|++++||.|
T Consensus 207 ~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~V 283 (490)
T 2bc0_A 207 VELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMV 283 (490)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEE
T ss_pred HHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEE
Confidence 9999999999999999999999998778999999999999999999999999999985 344434555 6788999999
Q ss_pred EEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 014997 226 VIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 304 (414)
Q Consensus 226 i~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~ 304 (414)
|+|+|++|+++++++. +..+ +|+|.||+++||+.|+|||+|||+..+....+...+..++..|..||+.+|+||++..
T Consensus 284 i~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 284 ILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp EECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCcChHHHHhh-hccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 9999999999988777 7654 5779999999999999999999998765555555556689999999999999999743
Q ss_pred CCCCCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE-------EcCC-----CCcEEEEEEe--CCEEEEE
Q 014997 305 THTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-------IGNF-----DPKIATFWID--SGKLKGV 363 (414)
Q Consensus 305 ~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-------~~~~-----~~~~~~~~~~--~~~~~g~ 363 (414)
.......|++|+.+|+.. +..+|.... +... +... ..-+.+++++ +++|+|+
T Consensus 363 ~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~ 435 (490)
T 2bc0_A 363 LEGIGVQGSNGISIYGLH-------MVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGA 435 (490)
T ss_dssp CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEE
T ss_pred CCCCCcccceEEEECCcE-------eEEeeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEEEEECCCCEEEEE
Confidence 222334678888888643 566775432 1111 1111 1135666664 5999999
Q ss_pred EeecC-ChHHh-hHHHHHHhCCCCCChhh---hcCCCcHHHHHHHHhc
Q 014997 364 LVESG-SPEEF-QLLPTLARSQPFVDKAK---LQQASSVEEALEIARA 406 (414)
Q Consensus 364 ~~~~~-~~~~~-~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 406 (414)
+++.. ++.++ ..+..+|+.+.++++-. +..+|++.|++..+..
T Consensus 436 ~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~ 483 (490)
T 2bc0_A 436 QMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITM 483 (490)
T ss_dssp EEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCTTCHHHH
T ss_pred EEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCchhHHHHH
Confidence 98665 45444 55677888898888733 5788998887655443
No 12
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.8e-43 Score=353.91 Aligned_cols=386 Identities=22% Similarity=0.328 Sum_probs=269.3
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH-HcCCeEEcCCcEEEEeCCCCEEE
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK-EKGIEMIYQDPVTSIDIEKQTLI 80 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~-~~~i~~~~~~~V~~id~~~~~V~ 80 (414)
+..+||||+++++++|.++.++. ++.+.......+...+ ....+..+++. +.+++++++++|+.++++.+.+.
T Consensus 27 ~g~~Vtvie~~~~~~~~~~gl~~-~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~ 100 (472)
T 3iwa_A 27 PEAHVTMIDQASRISYGGCGIPY-YVSGEVSNIESLQATP-----YNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVE 100 (472)
T ss_dssp TTSEEEEECCC-------------------------------------------------CEEECSEEEEEEETTTTEEE
T ss_pred cCCCEEEEECCCcccccccccch-hhcCCCCchHHhcccc-----chhccCHHHHhhhcCcEEEECCEEEEEECCCCEEE
Confidence 46799999999999999888875 4444222111110000 00123445555 58999999999999999999888
Q ss_pred eCC---Cc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc--CCCeEEEECCChHHHHHHHHHH
Q 014997 81 TNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE--KAKKVVVVGGGYIGMEVAAAAV 153 (414)
Q Consensus 81 ~~~---g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~--~~~~vvVvGgG~~g~e~A~~l~ 153 (414)
+.+ |+ .+.||+||||||++|. .|.++|.+.++++++++..++..+...+. .+++++|||+|++|+|+|..|+
T Consensus 101 ~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~ 179 (472)
T 3iwa_A 101 IENLRTGERRTLKYDKLVLALGSKAN-RPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLA 179 (472)
T ss_dssp EEETTTCCEEEEECSEEEECCCEEEC-CCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHH
T ss_pred EeecCCCCEEEEECCEEEEeCCCCcC-CCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHH
Confidence 765 65 7999999999999986 45567877789999999998888876663 4799999999999999999999
Q ss_pred hC-CCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 154 GW-KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 154 ~~-g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
++ |.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|++++.. ++.+ .+.+.+|++++||.||+|+|++
T Consensus 180 ~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 180 DMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKV-ARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBE-EEEEESSCEEECSEEEECSCEE
T ss_pred HhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeE-EEEEeCCCEEEcCEEEECCCCC
Confidence 99 9999999999999986789999999999999999999999999999863 4444 3778889999999999999999
Q ss_pred CCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 014997 233 PTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYL 311 (414)
Q Consensus 233 p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~ 311 (414)
|++++++++|++.+ +|+|.||+++||+.|+|||+|||+..+....|.....+++..|..||+.+|+||++........+
T Consensus 258 p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~ 337 (472)
T 3iwa_A 258 PNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAV 337 (472)
T ss_dssp ECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBC
T ss_pred cCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCC
Confidence 99998888899875 68899999999999999999999987766666655566788899999999999997544323456
Q ss_pred CceeeeccCCCCCCcceeeeEeecCCCc-------E--EEEc---------CCCCcEEEEEEe--CCEEEEEEeecC---
Q 014997 312 PYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T--IEIG---------NFDPKIATFWID--SGKLKGVLVESG--- 368 (414)
Q Consensus 312 p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~--~~~~---------~~~~~~~~~~~~--~~~~~g~~~~~~--- 368 (414)
|++|+.+++.. ++.+|..+.+ . .... +...-+.++.++ +++|+|+++++.
T Consensus 338 ~~~~~~~~~~~-------~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~ 410 (472)
T 3iwa_A 338 GSWAVKLFEGS-------ASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGD 410 (472)
T ss_dssp CCEEEECSSCE-------EEEEECCHHHHHHTTCCEEEEEEEC-----------CEEEEEEEETTTCBEEEEEEEESCHH
T ss_pred cceEEEECCce-------eEEEECCHHHHHHcCCceEEEEEecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcc
Confidence 78888777643 5666754321 1 1000 001235677774 699999998555
Q ss_pred ChHH-hhHHHHHHhCCCCCChhh--hcCC-CcHHHHHHH
Q 014997 369 SPEE-FQLLPTLARSQPFVDKAK--LQQA-SSVEEALEI 403 (414)
Q Consensus 369 ~~~~-~~~~~~l~~~~~~~~~~~--~~~~-~~~~~~~~~ 403 (414)
.+.+ +..+..+|+.+.+++.-. ...+ |+++|+...
T Consensus 411 ~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~ 449 (472)
T 3iwa_A 411 ALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMDI 449 (472)
T ss_dssp HHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CCH
T ss_pred cHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCcccH
Confidence 2234 445556778888877733 2343 778776543
No 13
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=6.8e-43 Score=350.11 Aligned_cols=373 Identities=18% Similarity=0.235 Sum_probs=281.8
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
+..+|+||++++++.|.++.++. ++.+......++ .....+++++.+++++++++|+.+|++.+.+.+
T Consensus 26 ~g~~V~vie~~~~~g~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v 93 (452)
T 3oc4_A 26 PQAEISLIDKQATVGYLSGGLSA-YFNHTINELHEA-----------RYITEEELRRQKIQLLLNREVVAMDVENQLIAW 93 (452)
T ss_dssp SSSEEEEECSSSCCSSCCC----------------------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEE
T ss_pred cCCcEEEEECCCCCcccCccchh-hhcCCCCCHHHh-----------hcCCHHHHHHCCCEEEECCEEEEEECCCCEEEE
Confidence 46799999999999998777764 444422222222 245788999999999999999999999998876
Q ss_pred C---CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCc
Q 014997 82 N---SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLD 158 (414)
Q Consensus 82 ~---~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~ 158 (414)
. +++++.||+||||||++|.. |+++|.+.+++++.+++.++..+......+++++|||+|++|+|+|..|+++|.+
T Consensus 94 ~~~~~~~~~~~d~lviAtG~~p~~-p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~ 172 (452)
T 3oc4_A 94 TRKEEQQWYSYDKLILATGASQFS-TQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKT 172 (452)
T ss_dssp EETTEEEEEECSEEEECCCCCBCC-CCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EecCceEEEEcCEEEECCCcccCC-CCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCe
Confidence 3 56689999999999999874 5567877788998887777777666666789999999999999999999999999
Q ss_pred EEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhh
Q 014997 159 TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 238 (414)
Q Consensus 159 Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l 238 (414)
|+++++.++++++.+++++.+.+.+.+++.||++++++.|++++.. ++.+ .+.+++| +++||.||+|+|++|+++++
T Consensus 173 Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 173 VHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp EEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCBCCCSSC
T ss_pred EEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCCCChHHH
Confidence 9999999999987789999999999999999999999999999854 3444 6777777 89999999999999999887
Q ss_pred hhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCC-CCCceee
Q 014997 239 ERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYD-YLPYFYS 316 (414)
Q Consensus 239 ~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~-~~p~~~~ 316 (414)
+.. +..+ +|+|.||+++||+.|+|||+|||+..+....+...+...+..|..||+.+|+||++.. ..+. ..+..++
T Consensus 250 ~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~~~~~ 327 (452)
T 3oc4_A 250 DKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKT-HRFIGSLRTMGT 327 (452)
T ss_dssp CTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCC-CCCCCCCCCEEE
T ss_pred Hhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCC-ccCCCccccEEE
Confidence 654 5553 6789999999999999999999998765555554455678899999999999999743 3343 3456667
Q ss_pred eccCCCCCCcceeeeEeecCCCc-------EE--EE---c----CCCCcEEEEEEe--CCEEEEEEeecC-ChHHh-hHH
Q 014997 317 RVFEYEGSPRKVWWQFFGDNVGE-------TI--EI---G----NFDPKIATFWID--SGKLKGVLVESG-SPEEF-QLL 376 (414)
Q Consensus 317 ~~~~~~g~~~~~~~~~~G~~~~~-------~~--~~---~----~~~~~~~~~~~~--~~~~~g~~~~~~-~~~~~-~~~ 376 (414)
.+|+.. +..+|..+.+ .. .. . +...-|.++.++ +++|+|+++++. ++.++ ..+
T Consensus 328 ~~~~~~-------~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~ 400 (452)
T 3oc4_A 328 KVGDYY-------LASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTL 400 (452)
T ss_dssp EETTEE-------EEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHH
T ss_pred EEcCee-------EEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHH
Confidence 777642 5667765421 11 10 0 011236777776 489999998665 45554 455
Q ss_pred HHHHhCCCCCChhh---hcCCCcHHH
Q 014997 377 PTLARSQPFVDKAK---LQQASSVEE 399 (414)
Q Consensus 377 ~~l~~~~~~~~~~~---~~~~~~~~~ 399 (414)
..+|+.+.+++.-. +..+|+++|
T Consensus 401 ~~ai~~~~t~~~l~~~~~~~~P~~~~ 426 (452)
T 3oc4_A 401 ALSIQTGQTLTDLLQKDYFYQPSLTN 426 (452)
T ss_dssp HHHHHTTCBHHHHHTCCCCCCTTTSC
T ss_pred HHHHHcCCCHHHHHhhHhccCCCCCC
Confidence 66788888887732 456777776
No 14
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=4.5e-43 Score=350.95 Aligned_cols=379 Identities=20% Similarity=0.268 Sum_probs=290.5
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
+..+|+||+++++.+|.+..++. ++.+......++ ..+..+++++.|++++.+++|+.++++.+.|.+
T Consensus 24 ~g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~ 91 (447)
T 1nhp_A 24 PDAEIQWYEKGDFISFLSAGMQL-YLEGKVKDVNSV-----------RYMTGEKMESRGVNVFSNTEITAIQPKEHQVTV 91 (447)
T ss_dssp TTSEEEEEESSSSSSBCGGGHHH-HHTTSSCCGGGS-----------BSCCHHHHHHTTCEEEETEEEEEEETTTTEEEE
T ss_pred cCCeEEEEECCCccCcccccchh-hhcCccCCHHHh-----------hcCCHHHHHHCCCEEEECCEEEEEeCCCCEEEE
Confidence 46789999999988886544432 333321112222 345678888999999999999999999998887
Q ss_pred CC---Cc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc--CCCeEEEECCChHHHHHHHHHHh
Q 014997 82 NS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE--KAKKVVVVGGGYIGMEVAAAAVG 154 (414)
Q Consensus 82 ~~---g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~--~~~~vvVvGgG~~g~e~A~~l~~ 154 (414)
.+ |+ ++.||+||||||++|. .|.++|.+.++++++++.+++..+.+.+. .+++++|||+|++|+|+|..|++
T Consensus 92 ~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~ 170 (447)
T 1nhp_A 92 KDLVSGEERVENYDKLIISPGAVPF-ELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAK 170 (447)
T ss_dssp EETTTCCEEEEECSEEEECCCEEEC-CCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHH
T ss_pred EecCCCceEEEeCCEEEEcCCCCcC-CCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHH
Confidence 54 65 4899999999999987 45567776678988888888888777666 78999999999999999999999
Q ss_pred CCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 155 WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 155 ~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
+|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|++++.+ +.+..+.+ +++++++|.||+|+|.+|+
T Consensus 171 ~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 171 AGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp TTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred CCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 99999999999999886789999999999999999999999999999853 33334555 4578999999999999999
Q ss_pred ChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCC-CCC
Q 014997 235 VSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYD-YLP 312 (414)
Q Consensus 235 ~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~-~~p 312 (414)
.+++++. ++.+ +|+|.||+++||+.|+|||+|||+..+....+...+.+++..|..||+.+|+||++.. .++. ..+
T Consensus 248 ~~~~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~-~~~~~~~~ 325 (447)
T 1nhp_A 248 TAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV-KPFPGVQG 325 (447)
T ss_dssp CGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCC-CCCCCBCC
T ss_pred hHHHHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCC-CCCCCccc
Confidence 9988777 7664 5779999999999999999999998765544554456689999999999999999743 3343 467
Q ss_pred ceeeeccCCCCCCcceeeeEeecCCCc-------EE---E--EcCC------CCcEEEEEEe--CCEEEEEEeecCC-hH
Q 014997 313 YFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI---E--IGNF------DPKIATFWID--SGKLKGVLVESGS-PE 371 (414)
Q Consensus 313 ~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~---~--~~~~------~~~~~~~~~~--~~~~~g~~~~~~~-~~ 371 (414)
++|+.+++.. ++.+|....+ .. . .... ..-|.+++++ +++|+|++++... +.
T Consensus 326 ~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~ 398 (447)
T 1nhp_A 326 SSGLAVFDYK-------FASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLT 398 (447)
T ss_dssp CEEEEETTEE-------EEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCT
T ss_pred cEEEEECCee-------eEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHH
Confidence 8888877643 5666654321 10 1 1110 1125666665 5899999986655 44
Q ss_pred H-hhHHHHHHhCCCCCChhh---hcCCCcHHHHHHHHh
Q 014997 372 E-FQLLPTLARSQPFVDKAK---LQQASSVEEALEIAR 405 (414)
Q Consensus 372 ~-~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~ 405 (414)
+ +..+..+|+.+.++++-. +..||+++|++..+.
T Consensus 399 e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~ 436 (447)
T 1nhp_A 399 ANINAISLAIQAKMTIEDLAYADFFFQPAFDKPWNIIN 436 (447)
T ss_dssp THHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSSCHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcccHHH
Confidence 4 445667889999888833 467888888665543
No 15
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.5e-41 Score=333.45 Aligned_cols=341 Identities=20% Similarity=0.266 Sum_probs=268.6
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCC-CHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQ-TPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
+.+|++|++++..+|.+|++++.+ .. .....++ ..+ ..+++++.+++++.+++|+.++++.++|.+
T Consensus 29 ~~~V~lie~~~g~~~~~~~l~~~~-~~-~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~ 95 (384)
T 2v3a_A 29 ETPLLMITADDGRSYSKPMLSTGF-SK-NKDADGL-----------AMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWI 95 (384)
T ss_dssp SSCEEEECSSCCCEECGGGGGGTT-TT-TCCHHHH-----------EEECHHHHHHHTTCEEECSCCCCEEEGGGTEEEE
T ss_pred CCCEEEEECCCCCccCcccccHHH-hC-CCCHHHh-----------hccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEE
Confidence 357999999999999999998733 22 1111111 112 245567899999998899999998899998
Q ss_pred CCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEE
Q 014997 82 NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTI 161 (414)
Q Consensus 82 ~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtl 161 (414)
+++ ++.||+||||||++|. .|+++|.+.+++++.+++.++..+...+..+++++|||+|++|+|+|..|+++|.+|++
T Consensus 96 ~~~-~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtl 173 (384)
T 2v3a_A 96 GEE-EVRYRDLVLAWGAEPI-RVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDV 173 (384)
T ss_dssp TTE-EEECSEEEECCCEEEC-CCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCc-EEECCEEEEeCCCCcC-CCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 754 6999999999999987 45567766678999999999888887777899999999999999999999999999999
Q ss_pred EeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhc
Q 014997 162 IFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV 241 (414)
Q Consensus 162 v~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~ 241 (414)
+++.++++++.+++++.+.+.+.+++.||++++++.|++++.+++ ...+.+.+|++++||.||+|+|.+|+.++++++
T Consensus 174 v~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~ 251 (384)
T 2v3a_A 174 VAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAA 251 (384)
T ss_dssp EESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEECCHHHHHT
T ss_pred EecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EEEEEECCCCEEECCEEEECcCCCcCHHHHHHC
Confidence 999999998767999999999999999999999999999986433 246788899999999999999999999899999
Q ss_pred CCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCC--CCCceeeecc
Q 014997 242 GLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYD--YLPYFYSRVF 319 (414)
Q Consensus 242 gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~--~~p~~~~~~~ 319 (414)
|++.++| |.||+++||+.|+|||+|||+...... ..+|..|..||+.+|+||++.. .+++ .+||++ |
T Consensus 252 g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~------~~~~~~a~~~g~~~a~~i~g~~-~~~~~~~~p~~~---~ 320 (384)
T 2v3a_A 252 GLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGLN------LLYVMPLMACARALAQTLAGNP-SQVAYGPMPVTV---K 320 (384)
T ss_dssp TCCBSSS-EEECTTCBCSSTTEEECGGGEEETTBC------CCSHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEEE---C
T ss_pred CCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCCC------cchHHHHHHHHHHHHHHhcCCC-ccCCCCCcceEE---E
Confidence 9988755 999999999999999999999754322 2368889999999999999743 4444 466532 2
Q ss_pred CCCCCCcceeeeEeecCCC---cEEEEcCCCCcEEEEEEe-CCEEEEEEeecCChHHhhHHH
Q 014997 320 EYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWID-SGKLKGVLVESGSPEEFQLLP 377 (414)
Q Consensus 320 ~~~g~~~~~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 377 (414)
.. + ..++..|.... .....++. ..|.+++++ +++|+|++++...+.++..+.
T Consensus 321 ~~-~----~~~~~~g~~~~~~~~~~~~~~~-~g~~~~~~~~~~~i~G~~~~g~~a~e~~~~~ 376 (384)
T 2v3a_A 321 TP-A----CPLVVSPPPRGMDGQWLVEGSG-TDLKVLCRDTAGRVIGYALTGAAVNEKLALN 376 (384)
T ss_dssp CT-T----SCEEEECCCTTCCCEEEEEEET-TEEEEEEECTTSCEEEEEEEGGGGGGHHHHH
T ss_pred EC-C----eeEEEecCCCCCCceEEEEecC-CcEEEEEEccCCEEEEEEEECcchHHHHHHH
Confidence 11 1 12566775432 23333432 347777775 799999998666666654443
No 16
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.3e-42 Score=344.07 Aligned_cols=373 Identities=20% Similarity=0.261 Sum_probs=279.4
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH-HHcCCeEEcCCcEEEEeCCCCEEE
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY-KEKGIEMIYQDPVTSIDIEKQTLI 80 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~~i~~~~~~~V~~id~~~~~V~ 80 (414)
++.+|+||+++++.+|.+..++. ++.+. ....++ ..+..+++ ++.+++++++++|+.++++.+.|.
T Consensus 27 ~~~~V~vie~~~~~~~~~~~~p~-~~~~~-~~~~~~-----------~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~ 93 (449)
T 3kd9_A 27 PEWDVKVFEATEWVSHAPCGIPY-VVEGL-STPDKL-----------MYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVR 93 (449)
T ss_dssp TTSEEEEECSSSCCC-------------------------------------CTHHHHTTCEEETTCEEEEECSSEEEEE
T ss_pred cCCCEEEEECCCccccCCcCCcc-ccCCC-CCHHHh-----------hhcCHHHHHHhcCcEEEecCEEEEEecCCCEEE
Confidence 35689999999988887656654 33332 222222 23344555 689999999999999999988998
Q ss_pred eCCC-cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc--CCCeEEEECCChHHHHHHHHHHhCCC
Q 014997 81 TNSG-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE--KAKKVVVVGGGYIGMEVAAAAVGWKL 157 (414)
Q Consensus 81 ~~~g-~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~--~~~~vvVvGgG~~g~e~A~~l~~~g~ 157 (414)
++++ .++.||+||||||++|+ .|.++|.+.+++++.++..++..+.+.+. .+++++|||+|++|+|+|..|+++|.
T Consensus 94 ~~~g~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 172 (449)
T 3kd9_A 94 ENGGEKSYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGK 172 (449)
T ss_dssp CSSSEEEEECSEEEECCCEEEC-CCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred ECCceEEEEcCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 8888 48999999999999986 45677877788998888888888777666 78999999999999999999999999
Q ss_pred cEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChh
Q 014997 158 DTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP 237 (414)
Q Consensus 158 ~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 237 (414)
+|+++++.++++++.+++++.+.+.+.+++. |++++++.+.+++.++ .+..+ +.+|++++||.||+|+|++|++++
T Consensus 173 ~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v-~~~g~~i~~D~Vv~a~G~~p~~~l 248 (449)
T 3kd9_A 173 NVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKV-VTDAGEYKAELVILATGIKPNIEL 248 (449)
T ss_dssp EEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEE-EETTEEEECSEEEECSCEEECCHH
T ss_pred eEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEE-EeCCCEEECCEEEEeeCCccCHHH
Confidence 9999999999998768999999999999999 9999999999998542 33233 456778999999999999999999
Q ss_pred hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCC-CCCcee
Q 014997 238 FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYD-YLPYFY 315 (414)
Q Consensus 238 l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~-~~p~~~ 315 (414)
++++|++.+ +|+|.||+++||+.|+|||+|||+..+....|...+...+..|..||+.+|+||++... .+. ..|++|
T Consensus 249 ~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~ 327 (449)
T 3kd9_A 249 AKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKEL-HFPGVLGTAV 327 (449)
T ss_dssp HHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC-CCCCBCCCEE
T ss_pred HHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCc-cCCCcccceE
Confidence 999999875 57799999999999999999999987765556555566888999999999999997543 443 467788
Q ss_pred eeccCCCCCCcceeeeEeecCCCc-------EEE-----EcCC------CCcEEEEEEeC--CEEEEEEeecCChHHhhH
Q 014997 316 SRVFEYEGSPRKVWWQFFGDNVGE-------TIE-----IGNF------DPKIATFWIDS--GKLKGVLVESGSPEEFQL 375 (414)
Q Consensus 316 ~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-----~~~~------~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~ 375 (414)
+.+++.. ++.+|..+.+ ... .+.. ..-|.++.++. ++|+|+++++..+.++..
T Consensus 328 ~~~~~~~-------~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~ 400 (449)
T 3kd9_A 328 TKFMDVE-------IGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRID 400 (449)
T ss_dssp EEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHH
T ss_pred EEEcCcE-------EEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHH
Confidence 8777653 6677755321 110 1110 12367777763 899999987777766654
Q ss_pred -HHHHHhCCCCCChhh---hcCCCcHHHH
Q 014997 376 -LPTLARSQPFVDKAK---LQQASSVEEA 400 (414)
Q Consensus 376 -~~~l~~~~~~~~~~~---~~~~~~~~~~ 400 (414)
+..+|+.+.+++.-. +.-+|+++++
T Consensus 401 ~~~~ai~~~~t~~~l~~~~~~~~p~~~~~ 429 (449)
T 3kd9_A 401 TAAAMLMAGFTTKDAFFTDLAYAPPFAPV 429 (449)
T ss_dssp HHHHHHHTTCBHHHHHTCCCCCBTTTBCS
T ss_pred HHHHHHHcCCcHHHHhhcccccCCCCCCc
Confidence 455678888777622 3445555543
No 17
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=9.4e-42 Score=351.26 Aligned_cols=364 Identities=19% Similarity=0.338 Sum_probs=285.2
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHH-cCCeEEcCCcEEEEeCCCCEEE
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQTLI 80 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~-~~i~~~~~~~V~~id~~~~~V~ 80 (414)
+..+||||+++++++|.++.++. ++.+.......+ ..+..+++.+ .+++++++++|+.+|++.+.+.
T Consensus 25 ~~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~ 92 (565)
T 3ntd_A 25 ETAEIIMFERGEYVSFANCGLPY-HISGEIAQRSAL-----------VLQTPESFKARFNVEVRVKHEVVAIDRAAKLVT 92 (565)
T ss_dssp SSSEEEEECSSSCSSBCGGGHHH-HHTSSSCCGGGG-----------BCCCHHHHHHHHCCEEETTEEEEEEETTTTEEE
T ss_pred cCCCEEEEECCCCccccccCchH-HhcCCcCChHHh-----------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEE
Confidence 36789999999999999888775 444422211111 2455666655 8999999999999999999887
Q ss_pred eCC---Cc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh--cCCCeEEEECCChHHHHHHHHHH
Q 014997 81 TNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIGMEVAAAAV 153 (414)
Q Consensus 81 ~~~---g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~--~~~~~vvVvGgG~~g~e~A~~l~ 153 (414)
+.+ |+ ++.||+||||||++|+. |.++|.+.+++++.+++.++..+...+ ..+++++|||+|++|+|+|..|+
T Consensus 93 ~~~~~~g~~~~~~~d~lviAtG~~p~~-p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~ 171 (565)
T 3ntd_A 93 VRRLLDGSEYQESYDTLLLSPGAAPIV-PPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLH 171 (565)
T ss_dssp EEETTTCCEEEEECSEEEECCCEEECC-CCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHH
T ss_pred EEecCCCCeEEEECCEEEECCCCCCCC-CCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHH
Confidence 753 54 79999999999999864 556887778899999988888776543 35789999999999999999999
Q ss_pred hCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEec------------------CCCcEEEEEeC
Q 014997 154 GWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG------------------SDGRVAAVKLE 215 (414)
Q Consensus 154 ~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~------------------~~~~~~~v~~~ 215 (414)
++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.+++++.+ .++.+ .+.+.
T Consensus 172 ~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~ 249 (565)
T 3ntd_A 172 HLGIKTTLLELADQVMT-PVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLS 249 (565)
T ss_dssp HTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEET
T ss_pred hcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEc
Confidence 99999999999999998 689999999999999999999999999999862 23433 56778
Q ss_pred CCcEEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHH
Q 014997 216 DGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 294 (414)
Q Consensus 216 ~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~ 294 (414)
+|++++||.||+|+|++|++++++++|+..+ +|+|.||+++||+.|+|||+|||+..+....|.....+++..|..||+
T Consensus 250 ~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 329 (565)
T 3ntd_A 250 NGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGR 329 (565)
T ss_dssp TSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHH
T ss_pred CCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHH
Confidence 8999999999999999999999888899875 688999999999999999999999877766666656678999999999
Q ss_pred HHHHHHhcCCCCCCCCC-CceeeeccCCCCCCcceeeeEeecCCCc---------EEE---EcC--C----CCcEEEEEE
Q 014997 295 HCIKALLSAQTHTYDYL-PYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIE---IGN--F----DPKIATFWI 355 (414)
Q Consensus 295 ~aa~~i~~~~~~~~~~~-p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~~~---~~~--~----~~~~~~~~~ 355 (414)
.+|+||++.. ..|... |+.|+.+|+.. ++.+|..+.+ ... .+. . ..-+.++.+
T Consensus 330 ~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 401 (565)
T 3ntd_A 330 MAADNMFGRE-ERYQGTQGTAICKVFDLA-------VGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVVSFKLLF 401 (565)
T ss_dssp HHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEE
T ss_pred HHHHHhcCCC-ccCCCcccceEEEEcCcE-------EEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCCceEEEEEEE
Confidence 9999999754 446554 45556677542 5667755321 111 111 1 112667777
Q ss_pred e--CCEEEEEEeecCCh-HHh-hHHHHHHhCCCCCCh
Q 014997 356 D--SGKLKGVLVESGSP-EEF-QLLPTLARSQPFVDK 388 (414)
Q Consensus 356 ~--~~~~~g~~~~~~~~-~~~-~~~~~l~~~~~~~~~ 388 (414)
+ +++|+|+++++..+ .++ ..+..+|+.+.+++.
T Consensus 402 ~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~~ 438 (565)
T 3ntd_A 402 DPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVEQ 438 (565)
T ss_dssp CTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHHH
T ss_pred ECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHH
Confidence 4 69999999877776 554 455556788887766
No 18
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=6.4e-42 Score=345.51 Aligned_cols=378 Identities=19% Similarity=0.300 Sum_probs=290.9
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHH-cCCeEEcCCcEEEEeCCCCEEE
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQTLI 80 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~-~~i~~~~~~~V~~id~~~~~V~ 80 (414)
+..+|+||++++..+|.++.++. ++.+......++ ..+..+++.+ .+++++.+++|+.++++.+.|.
T Consensus 60 ~g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~l-----------~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~ 127 (480)
T 3cgb_A 60 ENANVVTLEKGEIYSYAQCGLPY-VISGAIASTEKL-----------IARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVY 127 (480)
T ss_dssp TTCEEEEECSSSCCSBCGGGHHH-HHTTSSSCGGGG-----------BSSCHHHHHHTTCCEEESSEEEEEEETTTTEEE
T ss_pred cCCcEEEEECCCCCCCCCCCcch-hhcCCcCCHHHh-----------hhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEE
Confidence 35689999999998898776664 443321112222 2345677754 5999999999999999988887
Q ss_pred eCC---Cc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc--CCCeEEEECCChHHHHHHHHHH
Q 014997 81 TNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE--KAKKVVVVGGGYIGMEVAAAAV 153 (414)
Q Consensus 81 ~~~---g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~--~~~~vvVvGgG~~g~e~A~~l~ 153 (414)
+.+ |+ ++.||+||||||++|+ .|.++|.+.++++++++.+++..+.+.+. .+++++|||+|++|+|+|..|+
T Consensus 128 v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~ 206 (480)
T 3cgb_A 128 AEHTKTKDVFEFSYDRLLIATGVRPV-MPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFV 206 (480)
T ss_dssp EEETTTCCEEEEECSEEEECCCEEEC-CCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHH
T ss_pred EEEcCCCceEEEEcCEEEECCCCccc-CCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHH
Confidence 753 66 7999999999999986 45567766678998889998888776665 7899999999999999999999
Q ss_pred hCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcC
Q 014997 154 GWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 154 ~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 233 (414)
++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|+++..+ +.+..+.+++ .+++||.||+|+|++|
T Consensus 207 ~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~-~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 207 ELGKKVRMIERNDHIGT-IYDGDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDK-GTYKADLVLVSVGVKP 282 (480)
T ss_dssp HTTCEEEEECCGGGTTS-SSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETT-EEEECSEEEECSCEEE
T ss_pred hcCCeEEEEEeCCchhh-cCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECC-CEEEcCEEEECcCCCc
Confidence 99999999999998887 589999999999999999999999999999853 4454566654 5799999999999999
Q ss_pred CChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCC-CC
Q 014997 234 TVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYD-YL 311 (414)
Q Consensus 234 ~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~-~~ 311 (414)
+.++++++|++.+ +|+|.||+++||+.|+|||+|||+..+....|...+..++..|..||+.+|+||++. ..++. ..
T Consensus 283 ~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~-~~~~~~~~ 361 (480)
T 3cgb_A 283 NTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDK-RRAFKGTL 361 (480)
T ss_dssp SCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTC-CCCCCCBC
T ss_pred ChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCC-CccCCCcc
Confidence 9999999998865 578999999999999999999999876554455444568899999999999999974 33443 34
Q ss_pred CceeeeccCCCCCCcceeeeEeecCCC-------cE---EEEcC--C----C--CcEEEEEEe--CCEEEEEEeecCC-h
Q 014997 312 PYFYSRVFEYEGSPRKVWWQFFGDNVG-------ET---IEIGN--F----D--PKIATFWID--SGKLKGVLVESGS-P 370 (414)
Q Consensus 312 p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~---~~~~~--~----~--~~~~~~~~~--~~~~~g~~~~~~~-~ 370 (414)
+++|+.+++.. ++.+|.... +. ..... . . .-|.+++++ +++|+|++++... +
T Consensus 362 ~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a 434 (480)
T 3cgb_A 362 GTGIIKFMNLT-------LARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGV 434 (480)
T ss_dssp CCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSH
T ss_pred ceeEEEECCcE-------EEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEEECCccH
Confidence 56777777643 667775432 11 11111 0 1 125677664 6999999986655 5
Q ss_pred HH-hhHHHHHHhCCCCCCh-hh--hcCCCcHHHHHHHH
Q 014997 371 EE-FQLLPTLARSQPFVDK-AK--LQQASSVEEALEIA 404 (414)
Q Consensus 371 ~~-~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~ 404 (414)
.+ +..+..+|+.+.+++. .. +..+|+++|++..+
T Consensus 435 ~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~ 472 (480)
T 3cgb_A 435 DKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSVWDPI 472 (480)
T ss_dssp HHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCchhHH
Confidence 44 4556778899998887 33 35788888865544
No 19
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.2e-38 Score=327.48 Aligned_cols=362 Identities=21% Similarity=0.316 Sum_probs=279.9
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh-HHHHcCCeEEcCCcEEEEeCCCCEEE
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE-WYKEKGIEMIYQDPVTSIDIEKQTLI 80 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~-~~~~~~i~~~~~~~V~~id~~~~~V~ 80 (414)
+..+||||+++++++|.++.++. ++.+.......+ +.+..+ +.++.+++++++++|+.++++.+.+.
T Consensus 60 ~g~~V~vie~~~~~~~~~~~lp~-~~~g~~~~~~~~-----------~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~ 127 (588)
T 3ics_A 60 EEDEIIMVERGEYISFANCGLPY-YIGGVITERQKL-----------LVQTVERMSKRFNLDIRVLSEVVKINKEEKTIT 127 (588)
T ss_dssp SSSEEEEECSSSCSSBCGGGHHH-HHTTSSCCGGGG-----------BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEE
T ss_pred cCCCEEEEECCCCccccCCCCch-hhcCcCCChHHh-----------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEE
Confidence 46789999999999999887775 444321111111 123344 45688999999999999999999887
Q ss_pred eC---CCc--EEecCeEEEccCCCCCCCCCCCCC-CCCCEEEecCHHHHHHHHHhh--cCCCeEEEECCChHHHHHHHHH
Q 014997 81 TN---SGK--LLKYGSLIVATGCTASRFPEKIGG-YLPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIGMEVAAAA 152 (414)
Q Consensus 81 ~~---~g~--~~~yd~LviAtG~~~~~~~~~~g~-~~~gv~~~~~~~~~~~~~~~~--~~~~~vvVvGgG~~g~e~A~~l 152 (414)
+. +|+ .+.||+||||||++|. .|.++|. +.+++++.+++.++..+...+ ..+++++|||+|++|+|+|..|
T Consensus 128 v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l 206 (588)
T 3ics_A 128 IKNVTTNETYNEAYDVLILSPGAKPI-VPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENL 206 (588)
T ss_dssp EEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHH
T ss_pred EeecCCCCEEEEeCCEEEECCCCCCC-CCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHH
Confidence 74 465 7899999999999986 4556776 678899999998888776654 3689999999999999999999
Q ss_pred HhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 153 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 153 ~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
+++|.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|++++.+.+ .+.+.+|++++||.||+|+|++
T Consensus 207 ~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 207 RERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA----VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT----EEEETTSCEEECSEEEECSCEE
T ss_pred HhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC----EEEECCCCEEEcCEEEEccCCC
Confidence 9999999999999999985 8999999999999999999999999999985422 5778899999999999999999
Q ss_pred CCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCC-CC
Q 014997 233 PTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY-DY 310 (414)
Q Consensus 233 p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~-~~ 310 (414)
|++++++++|+..+ +|+|.||++++|+.|+|||+|||+..+....|.......+..|..||+.+|+||++.....+ ..
T Consensus 282 p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~ 361 (588)
T 3ics_A 282 PESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGT 361 (588)
T ss_dssp ECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCB
T ss_pred CChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCc
Confidence 99999999999874 68899999999999999999999987765556555566888999999999999997222334 34
Q ss_pred CCceeeeccCCCCCCcceeeeEeecCCCc---------EEE---EcCC------CCcEEEEEEe--CCEEEEEEeecCC-
Q 014997 311 LPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIE---IGNF------DPKIATFWID--SGKLKGVLVESGS- 369 (414)
Q Consensus 311 ~p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~~~---~~~~------~~~~~~~~~~--~~~~~g~~~~~~~- 369 (414)
+|..+...++.. +..+|..+.+ ... .... ..-+.++.++ +++|+|+++++..
T Consensus 362 ~~~~~~~~~~~~-------~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~ 434 (588)
T 3ics_A 362 LGTSVAKVFDLT-------VATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDG 434 (588)
T ss_dssp CCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSS
T ss_pred ccceEEEECCeE-------EEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCc
Confidence 566554444432 4556654311 110 1110 1126677774 6999999986543
Q ss_pred hHHhh-HHHHHHhCCCCCCh
Q 014997 370 PEEFQ-LLPTLARSQPFVDK 388 (414)
Q Consensus 370 ~~~~~-~~~~l~~~~~~~~~ 388 (414)
+.++. .+..+|+.+.+++.
T Consensus 435 ~~e~i~~~~~ai~~~~t~~~ 454 (588)
T 3ics_A 435 VDKRMDVIATAIKANLTVLD 454 (588)
T ss_dssp HHHHHHHHHHHHHTTCBTTT
T ss_pred HHHHHHHHHHHHHcCCCHHH
Confidence 55544 45567788888887
No 20
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=5.2e-37 Score=309.23 Aligned_cols=328 Identities=19% Similarity=0.269 Sum_probs=248.1
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCEEEeCC-C-cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-G-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 130 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~-g-~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 130 (414)
.+++++.+|+++.+ ++..+++....|.+.+ | +++.||+||+|||++|.. |+++|.+..+++ +..+.. ...
T Consensus 104 ~~~~~~~gv~~~~g-~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~-p~i~g~~~~~v~---t~~~~~---~~~ 175 (474)
T 1zmd_A 104 AHLFKQNKVVHVNG-YGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP-FPGITIDEDTIV---SSTGAL---SLK 175 (474)
T ss_dssp HHHHHHTTCEEEES-EEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC-CTTCCCCSSSEE---CHHHHT---TCS
T ss_pred HHHHHhCCCEEEEE-EEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC-CCCCCCCcCcEE---cHHHHh---hcc
Confidence 35667789999997 4566777666777776 4 579999999999999864 445564433443 233332 222
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
..+++++|||+|++|+|+|..|+++|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|++++.++++.+
T Consensus 176 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~- 254 (474)
T 1zmd_A 176 KVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI- 254 (474)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-
T ss_pred ccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-
Confidence 3579999999999999999999999999999999999998568999999999999999999999999999986544423
Q ss_pred EEE-----eCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccc
Q 014997 211 AVK-----LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 282 (414)
Q Consensus 211 ~v~-----~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~ 282 (414)
.+. ..+++++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 255 ~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~-------- 326 (474)
T 1zmd_A 255 DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPM-------- 326 (474)
T ss_dssp EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGSSSCC--------
T ss_pred EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCCEEEeeecCCCCc--------
Confidence 344 356678999999999999999987 788898875 5779999999999999999999997542
Q ss_pred cccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc-------EEE-E----------
Q 014997 283 VEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I---------- 343 (414)
Q Consensus 283 ~~~~~~A~~~a~~aa~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-~---------- 343 (414)
.+..|..||+.+|.||++... ..|..+|+++ .++. .+..+|....+ ... .
T Consensus 327 --~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~-------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 395 (474)
T 1zmd_A 327 --LAHKAEDEGIICVEGMAGGAVHIDYNCVPSVI--YTHP-------EVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAK 395 (474)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEE--CSSS-------EEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHH
T ss_pred --cHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEE--ECCC-------CeEEEeCCHHHHHhcCCCEEEEEEecccchhhh
Confidence 456799999999999997432 2345577653 2221 14555644321 111 0
Q ss_pred -cCCCCcEEEEEEe--CCEEEEEEeecCChHH-hhHHHHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhcCC
Q 014997 344 -GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK-AK-LQQASSVEEALEIARAAL 408 (414)
Q Consensus 344 -~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 408 (414)
.+....|.+++++ +++|+|++++...+.+ +..+..+|+.+.+++. .. +..||++.|++.+|+..+
T Consensus 396 ~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 466 (474)
T 1zmd_A 396 TNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 466 (474)
T ss_dssp HTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHHHH
T ss_pred hcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHHH
Confidence 0112347788887 6999999986666655 4566778899998887 33 688999999999998653
No 21
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=7.2e-37 Score=307.75 Aligned_cols=325 Identities=17% Similarity=0.238 Sum_probs=245.5
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 131 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~ 131 (414)
+++++.+|+++.++ +..+++....|.+.+| +++.||+||+|||++|.. |+++|.+.++++ +..+... ...
T Consensus 101 ~~~~~~~v~~~~g~-~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~-p~~~g~~~~~v~---t~~~~~~---~~~ 172 (468)
T 2qae_A 101 YLFKKNKVTYYKGE-GSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTE-LPFLPFDEKVVL---SSTGALA---LPR 172 (468)
T ss_dssp HHHHHHTCEEEEEE-EEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-BTTBCCCSSSEE---CHHHHHT---CSS
T ss_pred HHHHhCCCEEEEEE-EEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCC-CCCCCCCcCcee---chHHHhh---ccc
Confidence 45667899999975 4558877667777788 789999999999999864 444564444544 3333332 223
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHH-HhCCcEEEcCceEEEEEecCCCcEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY-QQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
.+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+ ++.||+++++++|++++.++++ +
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~- 249 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-TLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS-V- 249 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS-E-
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-cCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-
Confidence 579999999999999999999999999999999999998 58999999999999 9999999999999999865433 2
Q ss_pred EEEeC--CC--cEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccc-cCCccCCcccc
Q 014997 211 AVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAA-FPLKMYDRTAR 282 (414)
Q Consensus 211 ~v~~~--~g--~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~-~~~~~~~~~~~ 282 (414)
.+.+. +| ++++||.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|||+. .+.
T Consensus 250 ~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~-------- 321 (468)
T 2qae_A 250 SLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPM-------- 321 (468)
T ss_dssp EEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBSSSCS--------
T ss_pred EEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccCCCCCc--------
Confidence 45554 66 67999999999999999987 788898875 5779999999999999999999998 322
Q ss_pred cccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEEE----------
Q 014997 283 VEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIEI---------- 343 (414)
Q Consensus 283 ~~~~~~A~~~a~~aa~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~~---------- 343 (414)
.+..|..||+.+|.||++. ..+ +..+|++ ..++. .+..+|.... +....
T Consensus 322 --~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~--~~~~~-------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~ 389 (468)
T 2qae_A 322 --LAHKAEDEGVACAEILAGK-PGHVNYGVIPAV--IYTMP-------EVASVGKSEDELKKEGVAYKVGKFPFNANSRA 389 (468)
T ss_dssp --CHHHHHHHHHHHHHHHTTC-CCCCCTTSCCEE--ECSSS-------EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHH
T ss_pred --cHhHHHHHHHHHHHHHcCC-CccCCCCCCCEE--EECCC-------ceEEEeCCHHHHHhcCCCEEEEEEecccchhh
Confidence 4667999999999999974 333 3445643 22222 1455564321 11110
Q ss_pred --cCCCCcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCCC
Q 014997 344 --GNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDKA-K-LQQASSVEEALEIARAALP 409 (414)
Q Consensus 344 --~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 409 (414)
.+....|.+++++ +++|+|++++...+.++ ..+..+|+.+.+++.- . +..||++.|++.+|+..+.
T Consensus 390 ~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 462 (468)
T 2qae_A 390 KAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALF 462 (468)
T ss_dssp HHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHHHHH
T ss_pred hhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 0112347788886 69999999876666554 4556678999888872 2 6889999999999987654
No 22
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.7e-37 Score=312.20 Aligned_cols=328 Identities=19% Similarity=0.214 Sum_probs=252.0
Q ss_pred HhHHHHcCCeEEcCCcEEEEeC------CCCEEEeCCCc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHH
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDI------EKQTLITNSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADAD 124 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~------~~~~V~~~~g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~ 124 (414)
.+++++.||+++.+ +++.+++ ....|.+++|+ .+.||+||+|||++|.. |.++|.+..++++..+..
T Consensus 102 ~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~-p~i~g~~~~~v~~~~~~~--- 176 (499)
T 1xdi_A 102 TAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRI-LPSAQPDGERILTWRQLY--- 176 (499)
T ss_dssp HHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECC-CGGGCCCSSSEEEGGGGG---
T ss_pred HHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC-CCCCCCCcCcEEehhHhh---
Confidence 45667889999997 5888887 23356666776 79999999999999864 445665555666543222
Q ss_pred HHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEec
Q 014997 125 ALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG 204 (414)
Q Consensus 125 ~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 204 (414)
.....+++++|||+|++|+|+|..|+++|.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|++++.+
T Consensus 177 ---~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~ 252 (499)
T 1xdi_A 177 ---DLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADAALVLEESFAERGVRLFKNARAASVTRT 252 (499)
T ss_dssp ---GCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHHHHHHHHHHHHTTCEEETTCCEEEEEEC
T ss_pred ---hhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe
Confidence 22235789999999999999999999999999999999999985 89999999999999999999999999999865
Q ss_pred CCCcEEEEEeCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCccc
Q 014997 205 SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 281 (414)
Q Consensus 205 ~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~ 281 (414)
+++ + .+.+.+|+++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 253 ~~~-v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~------- 323 (499)
T 1xdi_A 253 GAG-V-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLP------- 323 (499)
T ss_dssp SSS-E-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTTEEECSGGGTSCS-------
T ss_pred CCE-E-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCCCEEEEeccCCCcc-------
Confidence 333 3 567888889999999999999999988 788898876 4779999999999999999999997542
Q ss_pred ccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc-------EEE-E--------
Q 014997 282 RVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I-------- 343 (414)
Q Consensus 282 ~~~~~~~A~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-~-------- 343 (414)
.+..|..||+.+|.||++.... .+..+|+++ .++. .+..+|....+ ... .
T Consensus 324 ---l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~~-------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~ 391 (499)
T 1xdi_A 324 ---LASVAAMQGRIAMYHALGEGVSPIRLRTVAATV--FTRP-------EIAAVGVPQSVIDAGSVAARTIMLPLRTNAR 391 (499)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEE--CSSS-------EEEEEESCHHHHHHTSSCEEEEEEESTTSHH
T ss_pred ---cHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEE--EecC-------CceEeCCCHHHHHhCCCCEEEEEEecCcccc
Confidence 4567999999999999975222 344566643 2221 25666754321 111 0
Q ss_pred ---cCCCCcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCCCc
Q 014997 344 ---GNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDKA-K-LQQASSVEEALEIARAALPV 410 (414)
Q Consensus 344 ---~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 410 (414)
.+....|.+++++ +++|+|++++...+.++ ..+..+|+.+.+++.- . +..+|++.|++.+++..+..
T Consensus 392 ~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~ 466 (499)
T 1xdi_A 392 AKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAARRLMA 466 (499)
T ss_dssp HHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHHHHCC
T ss_pred eeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHHHHhc
Confidence 0112347788887 59999999876666664 4556678889888872 2 78899999999999876543
No 23
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.6e-36 Score=307.50 Aligned_cols=325 Identities=22% Similarity=0.279 Sum_probs=250.5
Q ss_pred HHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCC-Ce
Q 014997 57 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA-KK 135 (414)
Q Consensus 57 ~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~-~~ 135 (414)
++.++++++..+++.+++ ++|.+. |+.+.||+||||||++|. .|.++|.+.+++++. .+... ...... ++
T Consensus 146 ~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~-~p~i~G~~~~~v~~~---~~~~~--~l~~~~g~~ 216 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPG-TLDVPGVNAKGVFDH---ATLVE--ELDYEPGST 216 (523)
T ss_dssp HTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECC-CCCSTTTTSBTEEEH---HHHHH--HCCSCCCSE
T ss_pred ccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCC-CCCCCCcccCcEeeH---HHHHH--HHHhcCCCe
Confidence 778999994568888886 577776 778999999999999987 455677655566643 22220 212234 99
Q ss_pred EEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcE--EEEE
Q 014997 136 VVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV--AAVK 213 (414)
Q Consensus 136 vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~--~~v~ 213 (414)
++|||+|++|+|+|..|+++|.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|+++...+++.+ ..+.
T Consensus 217 vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~ 295 (523)
T 1mo9_A 217 VVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAM 295 (523)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEE
Confidence 999999999999999999999999999999999884 8999999999999999999999999999986545543 3677
Q ss_pred eCCCc-EEecCEEEEccCCcCCCh-hhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHH
Q 014997 214 LEDGS-TIDADTIVIGIGAKPTVS-PFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 290 (414)
Q Consensus 214 ~~~g~-~i~~D~vi~a~G~~p~~~-~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~ 290 (414)
+++|+ +++||.||+|+|++|+++ +++++|++.+ +|+|.||+++||+.|+|||+|||+..+. .+..|.
T Consensus 296 ~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~----------~~~~A~ 365 (523)
T 1mo9_A 296 TPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGPM----------EMFKAR 365 (523)
T ss_dssp ETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGCSSC----------SHHHHH
T ss_pred ECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccCCCCEEEEeecCCCcc----------cHHHHH
Confidence 88887 899999999999999998 7999999875 6779999999999999999999997542 455699
Q ss_pred HHHHHHHHHHhcCCCC-CCCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE----EcC-------------
Q 014997 291 QSAQHCIKALLSAQTH-TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE----IGN------------- 345 (414)
Q Consensus 291 ~~a~~aa~~i~~~~~~-~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~----~~~------------- 345 (414)
.||+.+|.||++.... .+..+|+++.... .+..+|.... +... ..+
T Consensus 366 ~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~---------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (523)
T 1mo9_A 366 KSGCYAARNVMGEKISYTPKNYPDFLHTHY---------EVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVALPASDR 436 (523)
T ss_dssp HHHHHHHHHHTTCCCCCCCCSCCEEEESSS---------EEEEEECCHHHHHHTTCCEEEEEESCCSTTTTCSSCSCCTT
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCeEEECCC---------ceEEEeCCHHHHHhCCCCEEEEEEecccccccccccccccc
Confidence 9999999999974322 2556787653221 1445554321 1111 000
Q ss_pred -----------CCCcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCCh--hh--hcCCCcHHHHHHHHhcC
Q 014997 346 -----------FDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDK--AK--LQQASSVEEALEIARAA 407 (414)
Q Consensus 346 -----------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~ 407 (414)
...-|.+++++ +++|+|+++++..+.++ ..+..+|+.+.+++. .. +..||++.|++..+++.
T Consensus 437 ~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~~ 516 (523)
T 1mo9_A 437 TMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTHFIQLSRLRAG 516 (523)
T ss_dssp THHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSCCHHHHHHHHTT
T ss_pred cccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHhCCcceECCCHHHHHHHHHHh
Confidence 01237777775 69999999876666654 556677899998887 22 68899999999999887
Q ss_pred CCc
Q 014997 408 LPV 410 (414)
Q Consensus 408 ~~~ 410 (414)
+.+
T Consensus 517 ~~~ 519 (523)
T 1mo9_A 517 SKN 519 (523)
T ss_dssp CSS
T ss_pred hHh
Confidence 653
No 24
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.2e-37 Score=307.89 Aligned_cols=324 Identities=21% Similarity=0.273 Sum_probs=243.0
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 131 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~ 131 (414)
+++++.+|+++.++.+. ++.+..+|.+.+| +++.||+||+|||++|+. |..++.+.. + .+..+... ...
T Consensus 99 ~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~-~~~~g~~~~-~---~~~~~~~~---~~~ 169 (464)
T 2a8x_A 99 FLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL-VPGTSLSAN-V---VTYEEQIL---SRE 169 (464)
T ss_dssp HHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC-CTTCCCBTT-E---ECHHHHHT---CSS
T ss_pred HHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCCCCce-E---EecHHHhh---ccc
Confidence 45667899999976543 5554456677777 689999999999999864 444453322 2 23343332 223
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 211 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~ 211 (414)
.+++++|||+|++|+|+|..|+++|.+||++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++ + .
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~ 246 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-NEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQ-V-T 246 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSC-E-E
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCe-E-E
Confidence 579999999999999999999999999999999999998 589999999999999999999999999999865333 2 4
Q ss_pred EEeC-CC--cEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCccccccc
Q 014997 212 VKLE-DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 285 (414)
Q Consensus 212 v~~~-~g--~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~ 285 (414)
+.+. +| +++++|.|++|+|++||+++ ++++|+..+ +|+|.||+++||+.|+|||+|||+..+. .
T Consensus 247 v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~----------~ 316 (464)
T 2a8x_A 247 VTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQ----------L 316 (464)
T ss_dssp EEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGGCSSC----------S
T ss_pred EEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeECcCCCcc----------C
Confidence 5553 56 67999999999999999987 788898875 5779999999999999999999997532 4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC---CCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE-------------
Q 014997 286 VDHARQSAQHCIKALLSAQTHT---YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE------------- 342 (414)
Q Consensus 286 ~~~A~~~a~~aa~~i~~~~~~~---~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~------------- 342 (414)
+..|..||+.+|+||++....+ |..+|++ ..++. .+..+|.... +...
T Consensus 317 ~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~-------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~ 387 (464)
T 2a8x_A 317 AHVAEAQGVVAAETIAGAETLTLGDHRMLPRA--TFCQP-------NVASFGLTEQQARNEGYDVVVAKFPFTANAKAHG 387 (464)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEE--ECSSS-------EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcccCCCCCCCEE--EECCC-------CeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhh
Confidence 5679999999999999723333 4456653 22221 1445554321 1111
Q ss_pred EcCCCCcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCCC
Q 014997 343 IGNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDKA-K-LQQASSVEEALEIARAALP 409 (414)
Q Consensus 343 ~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 409 (414)
.++ ...|.+++++ +++|+|++++...+.++ ..+..+|+.+.+++.- . +..||++.|++.+|+..+.
T Consensus 388 ~~~-~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 458 (464)
T 2a8x_A 388 VGD-PSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFHGLV 458 (464)
T ss_dssp HTC-CCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHHHHH
T ss_pred cCC-CcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHHHHh
Confidence 111 2347788886 69999999876666554 4556678999888772 2 6889999999999986544
No 25
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-36 Score=304.88 Aligned_cols=322 Identities=23% Similarity=0.335 Sum_probs=241.6
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCC-cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g-~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
+++++.+++++.++. ..+++....|.+.+| +++.||+||||||++|.. |.+++.+.. + .+..+.. .....
T Consensus 99 ~~~~~~gv~~~~g~~-~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~-~~~~g~~~~-v---~~~~~~~---~~~~~ 169 (455)
T 1ebd_A 99 GLLKGNKVEIVKGEA-YFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIE-LPNFKFSNR-I---LDSTGAL---NLGEV 169 (455)
T ss_dssp HHHHTTTCEEEESEE-EEEETTEEEEEETTEEEEEECSEEEECCCEEECC-BTTBCCCSS-E---ECHHHHH---TCSSC
T ss_pred HHHHhCCCEEEEEEE-EEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC-CCCCCccce-E---ecHHHHh---ccccC
Confidence 456678999999854 457776667777777 689999999999999864 444453322 2 2333332 22235
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++ + .+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v 246 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-GFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDG-V-TV 246 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTE-E-EE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-E-EE
Confidence 79999999999999999999999999999999999987 489999999999999999999999999999864332 2 34
Q ss_pred EeC---CCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccH
Q 014997 213 KLE---DGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 286 (414)
Q Consensus 213 ~~~---~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~ 286 (414)
.+. +++++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|||+..+. .+
T Consensus 247 ~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~----------~~ 316 (455)
T 1ebd_A 247 TYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPA----------LA 316 (455)
T ss_dssp EEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSCC----------CH
T ss_pred EEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccCCCcc----------cH
Confidence 443 4568999999999999999887 678888875 5779999999999999999999997532 45
Q ss_pred HHHHHHHHHHHHHHhcCCCCC--CCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE-------------Ec
Q 014997 287 DHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-------------IG 344 (414)
Q Consensus 287 ~~A~~~a~~aa~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-------------~~ 344 (414)
..|..||+.+|+||++. ..+ +..+|++ ..++.. +..+|.... +... .+
T Consensus 317 ~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~--~~~~~~-------~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 386 (455)
T 1ebd_A 317 HKASYEGKVAAEAIAGH-PSAVDYVAIPAV--VFSDPE-------CASVGYFEQQAKDEGIDVIAAKFPFAANGRALALN 386 (455)
T ss_dssp HHHHHHHHHHHHHHTSC-CCCCCCSCCCEE--ECSSSC-------EEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCC-CccCCCCCCCEE--EECCCc-------eEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcC
Confidence 67999999999999974 334 3445643 222221 344554321 1111 11
Q ss_pred CCCCcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhcCC
Q 014997 345 NFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDK-AK-LQQASSVEEALEIARAAL 408 (414)
Q Consensus 345 ~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 408 (414)
+ ...|.+++++ +++|+|++++...+.++ ..+..+|+.+.+++. .. +..||+++|++.+|+..+
T Consensus 387 ~-~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 454 (455)
T 1ebd_A 387 D-TDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVA 454 (455)
T ss_dssp C-CCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHHHHT
T ss_pred C-CcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHh
Confidence 1 2347788876 69999999866666554 455567888988887 23 789999999999998654
No 26
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=6.6e-37 Score=308.82 Aligned_cols=327 Identities=19% Similarity=0.295 Sum_probs=243.4
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cE------EecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHH
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KL------LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADA 125 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~------~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~ 125 (414)
+++++.+|+++.++.+. ++....+|.+.+| ++ +.||+||+|||++|+.+ ++....+ ..+.+..++..
T Consensus 104 ~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~---~g~~~~~-~~v~~~~~~~~ 178 (478)
T 1v59_A 104 LLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPF---PGIEIDE-EKIVSSTGALS 178 (478)
T ss_dssp HHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCC---TTCCCCS-SSEECHHHHTT
T ss_pred HHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCC---CCCCCCC-ceEEcHHHHHh
Confidence 45677899999986554 3444445666676 56 99999999999987533 3433333 12233444332
Q ss_pred HHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecC
Q 014997 126 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 205 (414)
Q Consensus 126 ~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 205 (414)
+ ...+++++|||+|++|+|+|..|+++|.+||++++.+++++ .+++++.+.+.+.+++.||++++++.|+++...+
T Consensus 179 ~---~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~ 254 (478)
T 1v59_A 179 L---KEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQKFLKKQGLDFKLSTKVISAKRND 254 (478)
T ss_dssp C---SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET
T ss_pred h---hccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEec
Confidence 2 23479999999999999999999999999999999999998 6899999999999999999999999999998521
Q ss_pred CCcEEEEEeC-----CCcEEecCEEEEccCCcCCCh--hhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccC
Q 014997 206 DGRVAAVKLE-----DGSTIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 277 (414)
Q Consensus 206 ~~~~~~v~~~-----~g~~i~~D~vi~a~G~~p~~~--~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~ 277 (414)
++....+.+. +++++++|.||+|+|.+|+++ +++++|++.+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 255 ~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~--- 331 (478)
T 1v59_A 255 DKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPM--- 331 (478)
T ss_dssp TTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSCC---
T ss_pred CCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEeeccCCCcc---
Confidence 2333355554 456899999999999999998 7888999876 6779999999999999999999998542
Q ss_pred CcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE-------
Q 014997 278 DRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE------- 342 (414)
Q Consensus 278 ~~~~~~~~~~~A~~~a~~aa~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~------- 342 (414)
.+..|..||+.+|+||++... ..|..+|++|..... +..+|.... +...
T Consensus 332 -------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~---------~a~vG~~e~~a~~~g~~~~~~~~~~~~ 395 (478)
T 1v59_A 332 -------LAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPE---------VAWVGKTEEQLKEAGIDYKIGKFPFAA 395 (478)
T ss_dssp -------CHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSE---------EEEEECCHHHHHHTTCCEEEEEEEGGG
T ss_pred -------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCc---------EEEEECCHHHHHHcCCCEEEEEEeccc
Confidence 456799999999999997432 346678877654322 344454321 1111
Q ss_pred ------EcCCCCcEEEEEEe--CCEEEEEEeecCChHH-hhHHHHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhcCCC
Q 014997 343 ------IGNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVDK-AK-LQQASSVEEALEIARAALP 409 (414)
Q Consensus 343 ------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 409 (414)
.++ ...+.+++++ +++|+|++++...+.+ +..+..+|+.+.+++. .. ...+|++.|++..++..+.
T Consensus 396 ~~~~~~~~~-~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 472 (478)
T 1v59_A 396 NSRAKTNQD-TEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMAAY 472 (478)
T ss_dssp CHHHHHTTC-CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHHHHHHHH
T ss_pred chhhhhcCC-CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHHHHHHHh
Confidence 111 2235666665 6999999986666545 5667778899998866 33 6789999999999886543
No 27
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.9e-37 Score=306.92 Aligned_cols=324 Identities=20% Similarity=0.316 Sum_probs=243.9
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 131 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~ 131 (414)
+++++.+++++.++.+ .++.+...|.+++| +++.||+||+|||++|.. |.++|.+.+++++ ..+.. ....
T Consensus 104 ~~~~~~gv~~~~g~~~-~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~-p~~~g~~~~~v~~---~~~~~---~~~~ 175 (470)
T 1dxl_A 104 GLFKKNKVTYVKGYGK-FVSPSEISVDTIEGENTVVKGKHIIIATGSDVKS-LPGVTIDEKKIVS---STGAL---ALSE 175 (470)
T ss_dssp HHHHHHTCEEEESCEE-EEETTEEEECCSSSCCEEEECSEEEECCCEEECC-BTTBCCCSSSEEC---HHHHT---TCSS
T ss_pred HHHHhCCCEEEEeEEE-EecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCCCCcccEEe---HHHhh---hhhh
Confidence 4566789999998654 47776556666677 689999999999999864 4445544344443 33322 2223
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 211 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~ 211 (414)
.+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++ + .
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~ 252 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-TMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG-V-K 252 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSS-E-E
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-cccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe-E-E
Confidence 579999999999999999999999999999999999988 589999999999999999999999999999865333 2 3
Q ss_pred EEeC---CC--cEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCccccc
Q 014997 212 VKLE---DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 283 (414)
Q Consensus 212 v~~~---~g--~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~ 283 (414)
+.+. +| +++++|.||+|+|++|++++ ++++|+..+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 253 v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~--------- 323 (470)
T 1dxl_A 253 LTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPM--------- 323 (470)
T ss_dssp EEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTSSSCC---------
T ss_pred EEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccCCCCc---------
Confidence 4443 44 68999999999999999987 688888875 5779999999999999999999997532
Q ss_pred ccHHHHHHHHHHHHHHHhcCCCCCC--CCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE------------
Q 014997 284 EHVDHARQSAQHCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE------------ 342 (414)
Q Consensus 284 ~~~~~A~~~a~~aa~~i~~~~~~~~--~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~------------ 342 (414)
.+..|..||+.+|.||++. ..++ ..+|++ ..++. .+..+|.... +...
T Consensus 324 -~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~--~~~~~-------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 392 (470)
T 1dxl_A 324 -LAHKAEEDGVACVEYLAGK-VGHVDYDKVPGV--VYTNP-------EVASVGKTEEQVKETGVEYRVGKFPFMANSRAK 392 (470)
T ss_dssp -CHHHHHHHHHHHHHHHTTS-CCCCCTTSCCEE--ECSSS-------EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHH
T ss_pred -cHHHHHHHHHHHHHHHcCC-CcCCCCCCCCEE--EECCC-------ceEEEcCCHHHHHhcCCcEEEEEEecccchHHH
Confidence 4567999999999999974 3343 445543 22222 1445554321 1111
Q ss_pred -EcCCCCcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCCC
Q 014997 343 -IGNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDKA-K-LQQASSVEEALEIARAALP 409 (414)
Q Consensus 343 -~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 409 (414)
.++ ...|.+++++ +++|+|++++...+.++ ..+..+|+.+.+++.- . +..||++.|++.+|+..+.
T Consensus 393 ~~~~-~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~ 464 (470)
T 1dxl_A 393 AIDN-AEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATY 464 (470)
T ss_dssp HHSC-CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHHHH
T ss_pred hcCC-CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHHHh
Confidence 111 2347788886 69999999876666554 4555678999888872 2 6889999999999986544
No 28
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=4.5e-36 Score=301.88 Aligned_cols=324 Identities=18% Similarity=0.250 Sum_probs=247.3
Q ss_pred hHHHHc-CCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh
Q 014997 54 EWYKEK-GIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 130 (414)
Q Consensus 54 ~~~~~~-~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 130 (414)
+++++. +|+++.+ ++..+++...+|.+.+| +++.||+||||||++|+ .|.++|.+..+++ +..+ +....
T Consensus 102 ~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~-~p~i~G~~~~~~~---~~~~---~~~~~ 173 (467)
T 1zk7_A 102 GILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPA-VPPIPGLKESPYW---TSTE---ALASD 173 (467)
T ss_dssp HHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEEC-CCCCTTTTTSCCB---CHHH---HHHCS
T ss_pred HHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCC-CCCCCCCCcCcee---cHHH---Hhccc
Confidence 455666 9999987 68889887777888888 68999999999999986 4555664333332 3333 33333
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
..+++++|||+|++|+|+|..|+++|.+|+++++.+++++ +++++.+.+.+.+++.||++++++.|++++.+ ++ ..
T Consensus 174 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~ 249 (467)
T 1zk7_A 174 TIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EF 249 (467)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EE
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EE
Confidence 4689999999999999999999999999999999999987 79999999999999999999999999999854 22 33
Q ss_pred EEEeCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHH
Q 014997 211 AVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 287 (414)
Q Consensus 211 ~v~~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~ 287 (414)
.+.++ +.++++|.||+|+|.+|++++ +++.+++.+ +|+|.||++++|+.|+|||+|||+..+. .+.
T Consensus 250 ~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~----------~~~ 318 (467)
T 1zk7_A 250 VLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQ----------FVY 318 (467)
T ss_dssp EEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTTBSSCC----------CHH
T ss_pred EEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEeccCCCcc----------cHH
Confidence 56666 457999999999999999875 578888875 5679999999999999999999998643 466
Q ss_pred HHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE-E-----------cCCC
Q 014997 288 HARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-I-----------GNFD 347 (414)
Q Consensus 288 ~A~~~a~~aa~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-~-----------~~~~ 347 (414)
.|..||+.+|.||++... ..+..+|++ ..++. .+..+|.... +... . ....
T Consensus 319 ~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~-------~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 389 (467)
T 1zk7_A 319 VAAAAGTRAAINMTGGDAALDLTAMPAV--VFTDP-------QVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDT 389 (467)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCTTCEEE--ECSSS-------EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCCCEE--EecCC-------ceEEEecCHHHHHhcCCCeEEEEEecccchhhhhcCCC
Confidence 799999999999997532 234445653 22221 2455664422 1111 0 0112
Q ss_pred CcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhcCCC
Q 014997 348 PKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDK-AK-LQQASSVEEALEIARAALP 409 (414)
Q Consensus 348 ~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 409 (414)
..+.+++++ +++|+|++++...+.++ ..+..+|+.+.+++. .. ...+|++.|++.+|+..+.
T Consensus 390 ~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~~ 456 (467)
T 1zk7_A 390 RGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFN 456 (467)
T ss_dssp CCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHHTTT
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHHh
Confidence 347788886 69999999866666554 456778899998887 23 6899999999999987654
No 29
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-37 Score=308.53 Aligned_cols=323 Identities=20% Similarity=0.237 Sum_probs=242.0
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeCCCc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
++++.+++++.+ +++.+++....|.+.+|+ ++.||+||||||++|..++.++|.+ . ..+.. .+......
T Consensus 114 ~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g~~--~---~~~~~---~~~~l~~~ 184 (479)
T 2hqm_A 114 NLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGFE--L---GTDSD---GFFRLEEQ 184 (479)
T ss_dssp HHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTTGG--G---SBCHH---HHHHCSSC
T ss_pred HHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCCcc--c---ccchH---HHhccccc
Confidence 455789999987 577787766677777776 7999999999999986431444431 1 22223 33333346
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++....+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v 263 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-KFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKI 263 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-ccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEE
Confidence 79999999999999999999999999999999999987 58999999999999999999999999999986544534567
Q ss_pred EeCCC-cEEecCEEEEccCCcCCChh-hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHH
Q 014997 213 KLEDG-STIDADTIVIGIGAKPTVSP-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 289 (414)
Q Consensus 213 ~~~~g-~~i~~D~vi~a~G~~p~~~~-l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A 289 (414)
.+++| +++++|.||+|+|++|++.+ ++++|++.+ +|+|.||++++|+.|+|||+|||+..+ ..+..|
T Consensus 264 ~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A 333 (479)
T 2hqm_A 264 HMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGKV----------ELTPVA 333 (479)
T ss_dssp EETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGTTSS----------CCHHHH
T ss_pred EECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccCCCCEEEEEecCCCc----------ccHHHH
Confidence 88899 78999999999999999876 788899875 678999999999999999999997642 256789
Q ss_pred HHHHHHHHHHHhcCC---C--CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc---------EEEE------------
Q 014997 290 RQSAQHCIKALLSAQ---T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIEI------------ 343 (414)
Q Consensus 290 ~~~a~~aa~~i~~~~---~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~~~~------------ 343 (414)
..||+.+|.||++.. . ..|..+|+. .|..+ .+..+|....+ ....
T Consensus 334 ~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~---~~~~~------~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~ 404 (479)
T 2hqm_A 334 IAAGRKLSNRLFGPEKFRNDKLDYENVPSV---IFSHP------EAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAML 404 (479)
T ss_dssp HHHHHHHHHHHHSCGGGTTCCCCCTTCCEE---ECCSS------CEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGGC
T ss_pred HHHHHHHHHHhcCCCccCcccCCCCCCCeE---EECCC------CeEEEeCCHHHHHhcCCCCcEEEEEEeccHHHHHhh
Confidence 999999999999643 2 234456652 23211 13444533210 1110
Q ss_pred cCCCCcEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhc
Q 014997 344 GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK-AK-LQQASSVEEALEIARA 406 (414)
Q Consensus 344 ~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 406 (414)
.+...-+.++.++ +++|+|+++++..+.++... ..+|+.+.+++. .. +..||++.|++.+++.
T Consensus 405 ~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 472 (479)
T 2hqm_A 405 SEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMRG 472 (479)
T ss_dssp SSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC-
T ss_pred cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHHHHH
Confidence 0112336777775 59999999876667766544 446788888877 22 7899999999876543
No 30
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=8.3e-37 Score=308.32 Aligned_cols=324 Identities=19% Similarity=0.259 Sum_probs=240.4
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCC------------cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHH
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSG------------KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVA 121 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g------------~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~ 121 (414)
.++++.+++++.++.+. ++.....|.+.+| .++.||+||+|||++|..++.++ .+ ..++ +..
T Consensus 103 ~~~~~~gv~~~~g~~~~-~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~~i~-~~-~~v~---~~~ 176 (482)
T 1ojt_A 103 GMAKSRKVDVIQGDGQF-LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIP-ED-PRII---DSS 176 (482)
T ss_dssp HHHHHTTCEEEEEEEEE-EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCSSCC-CC-TTEE---CHH
T ss_pred HHHHhCCcEEEeeEEEE-ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCCCCC-cc-CcEE---cHH
Confidence 45667899999986443 5554334444456 67999999999999987544233 22 2333 334
Q ss_pred HHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEE
Q 014997 122 DADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 201 (414)
Q Consensus 122 ~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 201 (414)
++.. ....+++++|||||++|+|+|..|+++|.+||++++.+++++ .+++++.+.+.+.+++.||++++++.|+++
T Consensus 177 ~~~~---~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i 252 (482)
T 1ojt_A 177 GALA---LKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-GADRDLVKVWQKQNEYRFDNIMVNTKTVAV 252 (482)
T ss_dssp HHTT---CCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHGGGEEEEECSCEEEEE
T ss_pred HHhc---ccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-ccCHHHHHHHHHHHHhcCCEEEECCEEEEE
Confidence 3322 223579999999999999999999999999999999999998 589999999999999999999999999999
Q ss_pred EecCCCcEEEEEeCC----CcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCC
Q 014997 202 EAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPL 274 (414)
Q Consensus 202 ~~~~~~~~~~v~~~~----g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~ 274 (414)
+.++++ ..+.+.+ |+++++|.||+|+|++||+++ ++++|++.+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 253 ~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~ 330 (482)
T 1ojt_A 253 EPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM 330 (482)
T ss_dssp EEETTE--EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEECGGGTCSSC
T ss_pred EEcCCe--EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEEEEEcccCCCc
Confidence 864332 3566666 778999999999999999987 688898876 4779999999999999999999997532
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE--E
Q 014997 275 KMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE--I 343 (414)
Q Consensus 275 ~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~--~ 343 (414)
.+..|..||+.+|.||++.. .+ +..+|++ ..++.. +..+|.... +... .
T Consensus 331 ----------l~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~--~~~~~~-------~a~vG~te~~a~~~g~~~~~~~~ 390 (482)
T 1ojt_A 331 ----------LAHKAVHEGHVAAENCAGHK-AYFDARVIPGV--AYTSPE-------VAWVGETELSAKASARKITKANF 390 (482)
T ss_dssp ----------CHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEE--ECSSSC-------EEEEECCHHHHHHHTCCEEEEEE
T ss_pred ----------cHHHHHHHHHHHHHHHcCCC-ccCCCCCCCEE--EEcCCC-------eEEEeCCHHHHHhcCCCEEEEEE
Confidence 46679999999999999743 33 3445643 222211 445554321 1111 0
Q ss_pred ----------cCCCCcEEEEEEe--CCEEEEEEeecCChHHhh-HHHHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCC
Q 014997 344 ----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVDKA-K-LQQASSVEEALEIARAAL 408 (414)
Q Consensus 344 ----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 408 (414)
.+....|.+++++ +++|+|++++...+.++. .+..+|+.+.+++.- . +..||+++|++.+|++.+
T Consensus 391 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~~ 470 (482)
T 1ojt_A 391 PWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAEVA 470 (482)
T ss_dssp EGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTTHHHHHHHHH
T ss_pred EcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHH
Confidence 0112347788884 699999998666666554 455678999888872 2 789999999999998654
Q ss_pred C
Q 014997 409 P 409 (414)
Q Consensus 409 ~ 409 (414)
.
T Consensus 471 ~ 471 (482)
T 1ojt_A 471 L 471 (482)
T ss_dssp H
T ss_pred h
Confidence 3
No 31
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=4.5e-36 Score=303.64 Aligned_cols=318 Identities=20% Similarity=0.297 Sum_probs=240.8
Q ss_pred HHHc-CCeEEcCCcEEEEeCCCCEEEeC---C-----CcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHH
Q 014997 56 YKEK-GIEMIYQDPVTSIDIEKQTLITN---S-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 126 (414)
Q Consensus 56 ~~~~-~i~~~~~~~V~~id~~~~~V~~~---~-----g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~ 126 (414)
+++. +|+++.+ +++.++. ++|.++ + ++++.||+||||||++|+. |.++|. +.+.+ +..+
T Consensus 117 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~~~~~~~~~~d~lViATGs~p~~-p~i~G~--~~~~~------~~~~ 184 (495)
T 2wpf_A 117 FNDTEGLDFFLG-WGSLESK--NVVVVRETADPKSAVKERLQADHILLATGSWPQM-PAIPGI--EHCIS------SNEA 184 (495)
T ss_dssp HHHCTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEECC-CCCTTG--GGCEE------HHHH
T ss_pred HhcCCCeEEEEe-EEEEeeC--CEEEEeecCCccCCCCeEEEcCEEEEeCCCCcCC-CCCCCc--ccccc------HHHH
Confidence 4567 9999997 5777764 677775 4 6789999999999999874 445553 22322 2233
Q ss_pred HHhhcCCCeEEEECCChHHHHHHHHHHhC---CCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEe
Q 014997 127 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 203 (414)
Q Consensus 127 ~~~~~~~~~vvVvGgG~~g~e~A~~l~~~---g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 203 (414)
......+++++|||+|++|+|+|..|+++ |.+||++++.+++++ .+++++.+.+.+.+++.||++++++.|+++..
T Consensus 185 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 263 (495)
T 2wpf_A 185 FYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-GFDETIREEVTKQLTANGIEIMTNENPAKVSL 263 (495)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCEEEESCCEEEEEE
T ss_pred HhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 22234578999999999999999999999 999999999999987 58999999999999999999999999999986
Q ss_pred cCCCcEEEEEeCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcc
Q 014997 204 GSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 280 (414)
Q Consensus 204 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~ 280 (414)
++++. ..+.+.+|++++||.||+|+|++|++++ ++++|+..+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 264 ~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~------- 335 (495)
T 2wpf_A 264 NTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL------- 335 (495)
T ss_dssp CTTSC-EEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC-------
T ss_pred cCCce-EEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-------
Confidence 54333 4678889989999999999999999974 678898876 678999999999999999999999632
Q ss_pred cccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc-------EEE-E-------
Q 014997 281 ARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I------- 343 (414)
Q Consensus 281 ~~~~~~~~A~~~a~~aa~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-~------- 343 (414)
..+..|..||+.+|.||++... ..|..+|+ ..|..+ .+..+|....+ ... .
T Consensus 336 ---~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~---~~~~~~------~~a~vGl~e~~a~~~~~~~~v~~~~~~~~~ 403 (495)
T 2wpf_A 336 ---MLTPVAINEGAALVDTVFGNKPRKTDHTRVAS---AVFSIP------PIGTCGLIEEVAAKEFEKVAVYMSSFTPLM 403 (495)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEE---EECCSS------CEEEEECCHHHHHHHSSEEEEEEEEECCTH
T ss_pred ---cCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCE---EEECCC------CeEEEeCCHHHHHhcCCCEEEEEEecCchh
Confidence 2577799999999999997433 23444554 233221 14556654321 111 1
Q ss_pred ----cCCCCcE-EEEEEe--CCEEEEEEeecCChHHhhH-HHHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhc
Q 014997 344 ----GNFDPKI-ATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK-AK-LQQASSVEEALEIARA 406 (414)
Q Consensus 344 ----~~~~~~~-~~~~~~--~~~~~g~~~~~~~~~~~~~-~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 406 (414)
+....-| .++.++ +++|+|++++...+.++.. +..+|+.+.+++. .. +..||++.|++.+++.
T Consensus 404 ~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 476 (495)
T 2wpf_A 404 HNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRT 476 (495)
T ss_dssp HHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCS
T ss_pred hhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHH
Confidence 1112347 787776 6999999997777766554 4556788888877 23 7899999999887653
No 32
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.3e-35 Score=298.17 Aligned_cols=322 Identities=21% Similarity=0.305 Sum_probs=241.3
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 133 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~ 133 (414)
+++++.+|+++.++ +..++. ++|.+. |+++.||+||||||++|+.+|.+++. ..++ +..+...+.. ..+
T Consensus 101 ~~~~~~gv~~~~g~-~~~~~~--~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~--~~v~---~~~~~~~l~~--~~~ 169 (464)
T 2eq6_A 101 TLLKGNGVELLRGF-ARLVGP--KEVEVG-GERYGAKSLILATGSEPLELKGFPFG--EDVW---DSTRALKVEE--GLP 169 (464)
T ss_dssp HHHHHTTCEEEESC-EEEEET--TEEEET-TEEEEEEEEEECCCEEECCBTTBCCS--SSEE---CHHHHTCGGG--CCC
T ss_pred HHHHhCCCEEEeee-EEEccC--CEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCC--CcEE---cHHHHHhhhh--hcC
Confidence 45677899999975 444654 678777 77899999999999998754323331 2333 3444333221 157
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 213 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 213 (414)
++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.+++ . ..+.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~-~~v~ 246 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-QGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKD-G-LHVR 246 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-E-EEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC-E-EEEE
Confidence 9999999999999999999999999999999999987 58999999999999999999999999999986432 2 2456
Q ss_pred eC-C--Cc--EEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCccccccc
Q 014997 214 LE-D--GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 285 (414)
Q Consensus 214 ~~-~--g~--~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~ 285 (414)
+. + |+ ++++|.||+|+|.+|++++ ++++|+..+ +|+|.||+++||+.|+|||+|||+..+. .
T Consensus 247 ~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~----------l 316 (464)
T 2eq6_A 247 LEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPL----------L 316 (464)
T ss_dssp EEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSSC----------C
T ss_pred EeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEeccCCCcc----------c
Confidence 65 5 76 8999999999999999886 578888874 5779999999999999999999997532 4
Q ss_pred HHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE-------------Ec
Q 014997 286 VDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-------------IG 344 (414)
Q Consensus 286 ~~~A~~~a~~aa~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-------------~~ 344 (414)
+..|..||+.+|+||++... ..+. +|++ .|..+ .+..+|.... +... .+
T Consensus 317 ~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~---~~~~~------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 386 (464)
T 2eq6_A 317 AHKAMREGLIAAENAAGKDSAFDYQ-VPSV---VYTSP------EWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLG 386 (464)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCC-CCEE---ECSSS------EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTS
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCC-CCeE---EECCC------CEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcC
Confidence 56799999999999997432 1344 6653 22211 1455554322 1111 11
Q ss_pred CCCCcEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCCh--hhhcCCCcHHHHHHHHhcCCCc
Q 014997 345 NFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDK--AKLQQASSVEEALEIARAALPV 410 (414)
Q Consensus 345 ~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 410 (414)
+ ...+.+++++ +++|+|++++...+.++ ..+..+|+.+.+++. ..+..||++.|++.++++.+..
T Consensus 387 ~-~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~~ 456 (464)
T 2eq6_A 387 G-AEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHK 456 (464)
T ss_dssp C-CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHHHHTT
T ss_pred C-CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHHhc
Confidence 1 2347788776 69999999877766665 556667899998887 2378899999999999876543
No 33
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=6.3e-36 Score=299.26 Aligned_cols=315 Identities=20% Similarity=0.245 Sum_probs=236.9
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 134 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 134 (414)
.+++.+++++.+ +++.+++ ++|.+ +|+++.||+||||||++|.. |.++|.+ . ..+..+.. .....++
T Consensus 102 ~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~-p~i~g~~--~---~~~~~~~~---~~~~~~~ 168 (450)
T 1ges_A 102 VLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPSH-PDIPGVE--Y---GIDSDGFF---ALPALPE 168 (450)
T ss_dssp HHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEECC-CCSTTGG--G---SBCHHHHH---HCSSCCS
T ss_pred HHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCCC-CCCCCcc--c---eecHHHhh---hhhhcCC
Confidence 346789999997 5666765 57777 67889999999999999864 4444431 1 23333333 3234579
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 214 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~ 214 (414)
+++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++. ..+.+
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~ 246 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLEL 246 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-hhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEE
Confidence 999999999999999999999999999999999887 5899999999999999999999999999998654443 36788
Q ss_pred CCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHH
Q 014997 215 EDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQ 291 (414)
Q Consensus 215 ~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~ 291 (414)
.+|+++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|||+..+ ..+..|..
T Consensus 247 ~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~ 316 (450)
T 1ges_A 247 EDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAV----------ELTPVAVA 316 (450)
T ss_dssp TTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTSC----------CCHHHHHH
T ss_pred CCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccCCCC----------ccHHHHHH
Confidence 89989999999999999999873 678898875 677999999999999999999998642 25677999
Q ss_pred HHHHHHHHHhcCCC---CCCCCCCceeeeccCCCCCCcceeeeEeecCCC---------cEEEE------------cCCC
Q 014997 292 SAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---------ETIEI------------GNFD 347 (414)
Q Consensus 292 ~a~~aa~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~---------~~~~~------------~~~~ 347 (414)
||+.+|.||++... ..|..+|+. .|..+ .+..+|.... ..... ....
T Consensus 317 ~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~~------~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 387 (450)
T 1ges_A 317 AGRRLSERLFNNKPDEHLDYSNIPTV---VFSHP------PIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQ 387 (450)
T ss_dssp HHHHHHHHHHTTCTTCCCCCSSCCEE---ECCSS------CEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCCeE---EECCC------ceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCC
Confidence 99999999997432 235556653 23221 1344553311 11110 1112
Q ss_pred CcEEEEEEe--CCEEEEEEeecCChHHhhHHH-HHHhCCCCCCh-hh-hcCCCcHHHHHHH
Q 014997 348 PKIATFWID--SGKLKGVLVESGSPEEFQLLP-TLARSQPFVDK-AK-LQQASSVEEALEI 403 (414)
Q Consensus 348 ~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~-~l~~~~~~~~~-~~-~~~~~~~~~~~~~ 403 (414)
..|.++.++ +++|+|++++...+.++...- .+|+.+.+++. .. +..||+++|++.+
T Consensus 388 ~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 448 (450)
T 1ges_A 388 PCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT 448 (450)
T ss_dssp EEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHHHh
Confidence 236677765 699999999766677765544 45788888887 33 7899999998764
No 34
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.7e-36 Score=304.83 Aligned_cols=328 Identities=16% Similarity=0.228 Sum_probs=230.8
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCC-------------CcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCH
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNS-------------GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDV 120 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~-------------g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~ 120 (414)
+++++.+|+++.++ +..+++ +.|.+.+ ++++.||+||||||++|.. |.++|. +.+.+ .
T Consensus 97 ~~~~~~gv~~~~g~-~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~-p~i~G~--~~~~~---~ 167 (500)
T 1onf_A 97 QNLSKDKVDLYEGT-ASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF-PPVKGI--ENTIS---S 167 (500)
T ss_dssp HHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBCC-CSCTTG--GGCEE---H
T ss_pred HHHHhCCCEEEEeE-EEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC-CCCCCC--CcccC---H
Confidence 34567899999874 444554 4555543 6679999999999999864 545553 22222 2
Q ss_pred HHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 121 ADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 121 ~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
.+ +.. +..+++++|||+|++|+|+|..|+++|.+||++++.+++++ .+++++.+.+.+.+++.||++++++.|++
T Consensus 168 ~~---~~~-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~gv~i~~~~~v~~ 242 (500)
T 1onf_A 168 DE---FFN-IKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-KFDESVINVLENDMKKNNINIVTFADVVE 242 (500)
T ss_dssp HH---HTT-CCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred HH---Hhc-cCCCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-ccchhhHHHHHHHHHhCCCEEEECCEEEE
Confidence 22 222 22389999999999999999999999999999999999997 58999999999999999999999999999
Q ss_pred EEecCCCcEEEEEeCCCcE-EecCEEEEccCCcCCCh-h-hhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCcc-
Q 014997 201 LEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVS-P-FERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKM- 276 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~-~-l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~- 276 (414)
++.++++. ..+.+++|++ ++||.||+|+|++|+++ + ++++|++.++|+|.||+++||+.|+|||+|||+..+...
T Consensus 243 i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~ 321 (500)
T 1onf_A 243 IKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQRTSVNNIYAVGDCCMVKKSKE 321 (500)
T ss_dssp EEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTTCBCSSSSEEECSTTEEEC----
T ss_pred EEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCCcccCCCCEEEEecccccccccc
Confidence 98654443 3678889988 99999999999999986 4 688888876678999999999999999999999532110
Q ss_pred ----------------------CC-cccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeee
Q 014997 277 ----------------------YD-RTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQ 331 (414)
Q Consensus 277 ----------------------~~-~~~~~~~~~~A~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~ 331 (414)
.+ ...+...+..|..||+.+|+||++.... .|..+|+. .|... .+.
T Consensus 322 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~~------~~a 392 (500)
T 1onf_A 322 IEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTV---IFSHP------PIG 392 (500)
T ss_dssp --------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEE---ECCSS------CEE
T ss_pred ccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeE---EEcCc------ceE
Confidence 00 0023457889999999999999974332 35556653 23211 134
Q ss_pred EeecCCC---------cEEE----------------EcCCCCcEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCC
Q 014997 332 FFGDNVG---------ETIE----------------IGNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQ 383 (414)
Q Consensus 332 ~~G~~~~---------~~~~----------------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~ 383 (414)
.+|.... .... ......-+.++.++ +++|+|++++...+.++... ..+|+.+
T Consensus 393 ~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~ 472 (500)
T 1onf_A 393 TIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMN 472 (500)
T ss_dssp EEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred EEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcC
Confidence 4443311 1110 01112336777774 69999999866667665544 4457888
Q ss_pred CCCCh-hh-hcCCCcHHHHHHHHh
Q 014997 384 PFVDK-AK-LQQASSVEEALEIAR 405 (414)
Q Consensus 384 ~~~~~-~~-~~~~~~~~~~~~~~~ 405 (414)
.+++. .. +..||++.|++..++
T Consensus 473 ~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 473 ATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp CBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred CCHHHHhccccCCCCHHHHHHHhc
Confidence 88877 22 789999999998765
No 35
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=5.1e-36 Score=302.97 Aligned_cols=318 Identities=19% Similarity=0.262 Sum_probs=241.0
Q ss_pred HHHc-CCeEEcCCcEEEEeCCCCEEEe-----CCC---cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHH
Q 014997 56 YKEK-GIEMIYQDPVTSIDIEKQTLIT-----NSG---KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 126 (414)
Q Consensus 56 ~~~~-~i~~~~~~~V~~id~~~~~V~~-----~~g---~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~ 126 (414)
+++. +|+++.+ +++.+++ +++.+ .+| +.+.||+||||||++|.. |.++|. +. +.+..+.
T Consensus 113 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~p~~-p~i~g~--~~---~~~~~~~--- 180 (490)
T 1fec_A 113 FADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYILLATGSWPQH-LGIEGD--DL---CITSNEA--- 180 (490)
T ss_dssp HHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEECC-CCSBTG--GG---CBCHHHH---
T ss_pred HhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEEEEeCCCCCCC-CCCCCc--cc---eecHHHH---
Confidence 4567 9999997 5778876 45555 366 689999999999999874 444543 22 2233333
Q ss_pred HHhhcCCCeEEEECCChHHHHHHHHHHhC---CCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEe
Q 014997 127 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 203 (414)
Q Consensus 127 ~~~~~~~~~vvVvGgG~~g~e~A~~l~~~---g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 203 (414)
......+++++|||+|++|+|+|..|+++ |.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.
T Consensus 181 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 259 (490)
T 1fec_A 181 FYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPAKVTK 259 (490)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTEEEEETCCEEEEEE
T ss_pred hhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-ccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 22234578999999999999999999999 999999999999987 58999999999999999999999999999986
Q ss_pred cCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh-h-hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcc
Q 014997 204 GSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 280 (414)
Q Consensus 204 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~-~-l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~ 280 (414)
++++. ..+.+.+|+++++|.||+|+|.+|+++ + ++++|+..+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 260 ~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~------- 331 (490)
T 1fec_A 260 NADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV------- 331 (490)
T ss_dssp CTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCSC-------
T ss_pred cCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-------
Confidence 54333 367888998999999999999999987 4 688899876 678999999999999999999999632
Q ss_pred cccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc-------EEE-E-------
Q 014997 281 ARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I------- 343 (414)
Q Consensus 281 ~~~~~~~~A~~~a~~aa~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-~------- 343 (414)
..+..|..||+.+|.||++... ..|..+|+. .|..+ .+..+|....+ ... .
T Consensus 332 ---~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~~------~~a~vG~~e~~a~~~~~~~~~~~~~~~~~~ 399 (490)
T 1fec_A 332 ---MLTPVAINEGAAFVDTVFANKPRATDHTKVACA---VFSIP------PMGVCGYVEEDAAKKYDQVAVYESSFTPLM 399 (490)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEE---ECCSS------CEEEEECCHHHHHHHCSEEEEEEEEECCHH
T ss_pred ---cCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEE---EECCC------CeEEEeCCHHHHHhcCCCEEEEEeecChhh
Confidence 2577899999999999997433 234455642 33221 15566654321 111 0
Q ss_pred ----cCCCCcEE-EEEEe--CCEEEEEEeecCChHHhh-HHHHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhc
Q 014997 344 ----GNFDPKIA-TFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVDK-AK-LQQASSVEEALEIARA 406 (414)
Q Consensus 344 ----~~~~~~~~-~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 406 (414)
+....-|. ++.++ +++|+|++++...+.++. .+..+|+.+.+++. .. +..||++.|++.+++.
T Consensus 400 ~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 472 (490)
T 1fec_A 400 HNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRT 472 (490)
T ss_dssp HHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCCS
T ss_pred hhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHHH
Confidence 11123477 88776 699999999777776655 44556788888877 22 7899999999887663
No 36
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.6e-35 Score=297.74 Aligned_cols=323 Identities=18% Similarity=0.225 Sum_probs=243.9
Q ss_pred HHHcCCeEEcCCcEEEEeCCCCEEEeCCCcE--EecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHH-hhcC
Q 014997 56 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKL--LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS-SLEK 132 (414)
Q Consensus 56 ~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~--~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~-~~~~ 132 (414)
+++.+++++.+ ++..++++...|.+++|++ +.||+||||||++|+. |.++|.+ + +.+..+...+.. ....
T Consensus 99 ~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~-p~i~G~~--~---~~t~~~~~~~~~~l~~~ 171 (466)
T 3l8k_A 99 SQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAK-LRLPGVE--Y---CLTSDDIFGYKTSFRKL 171 (466)
T ss_dssp TTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-CCCTTGG--G---SBCHHHHHSTTCSCCSC
T ss_pred HHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccC-CCCCCcc--c---eEeHHHHHHHHHHHhhC
Confidence 34569999986 8999998888888888988 9999999999998864 5455533 2 334444442221 2235
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|+++|.+|+++++.+++++..+++++.+.+.+.++ |++++++.|++++..+++.+ .+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v-~v 247 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEY-EV 247 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEE-EE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcE-EE
Confidence 789999999999999999999999999999999999986449999998888776 99999999999986532333 46
Q ss_pred EeC--CCc--EEecCEEEEccCCcCCChh-hhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHH
Q 014997 213 KLE--DGS--TIDADTIVIGIGAKPTVSP-FERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 287 (414)
Q Consensus 213 ~~~--~g~--~i~~D~vi~a~G~~p~~~~-l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~ 287 (414)
.+. +|+ ++++|.|++|+|++|++.+ ++++|++.+.++|.||+++||+.|+|||+|||+..+. .+.
T Consensus 248 ~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~Gi~vd~~~~t~~~~Iya~GD~~~~~~----------~~~ 317 (466)
T 3l8k_A 248 IYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDETMKTNIPNVFATGDANGLAP----------YYH 317 (466)
T ss_dssp EECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSSBCCCTTCBCSSTTEEECGGGTCSCC----------SHH
T ss_pred EEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCCEeECCCccCCCCCEEEEEecCCCCc----------cHh
Confidence 676 666 8999999999999999885 7888998763349999999999999999999998632 566
Q ss_pred HHHHHHHHHHHHHhcC--CCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc-------EEE-Ec-----------
Q 014997 288 HARQSAQHCIKALLSA--QTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-IG----------- 344 (414)
Q Consensus 288 ~A~~~a~~aa~~i~~~--~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-~~----------- 344 (414)
.|..||+.+|.||++. ... .+..+|+ ..|..+ .+..+|..+.+ ... .-
T Consensus 318 ~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~---~~~~~~------~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~ 388 (466)
T 3l8k_A 318 AAVRMSIAAANNIMANGMPVDYVDVKSIPV---TIYTIP------SLSYVGILPSKARKMGIEIVEAEYNMEEDVSAQIY 388 (466)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCCCCSTTSCE---EECSSS------CEEEEECCHHHHHHHTCCEEEEEEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCccccCCCCCcE---EEECCC------CeEEecCCHHHHHhCCCCEEEEEEEcccChhheec
Confidence 7999999999999975 322 3444554 233322 14556654321 111 00
Q ss_pred CCCCcEEEEEEe--CCEEEEEEeecCChHHhhH-HHHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhcCC
Q 014997 345 NFDPKIATFWID--SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK-AK-LQQASSVEEALEIARAAL 408 (414)
Q Consensus 345 ~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~-~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 408 (414)
+...-+.++.++ +++|+|+++++.++.++.. +..+|+.+.+++. .. +..||++.|++.+++..+
T Consensus 389 ~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~ 457 (466)
T 3l8k_A 389 GQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIISYTARKV 457 (466)
T ss_dssp TCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHHHHHH
Confidence 012336777775 4999999997777776654 4456799998888 23 789999999999998753
No 37
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=3.2e-35 Score=295.13 Aligned_cols=316 Identities=19% Similarity=0.287 Sum_probs=237.7
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 134 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 134 (414)
.+++.+|+++.+ ++..++. +.|.+ +|+++.||+||||||++|.. |.++|.+ . ..+..+. ......++
T Consensus 101 ~~~~~gv~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~-p~i~G~~--~---~~~~~~~---~~~~~~~~ 167 (463)
T 2r9z_A 101 YVERLGITRVDG-HARFVDA--HTIEV-EGQRLSADHIVIATGGRPIV-PRLPGAE--L---GITSDGF---FALQQQPK 167 (463)
T ss_dssp HHHHTTCEEEES-CEEEEET--TEEEE-TTEEEEEEEEEECCCEEECC-CSCTTGG--G---SBCHHHH---HHCSSCCS
T ss_pred HHHHCCCEEEEe-EEEEccC--CEEEE-CCEEEEcCEEEECCCCCCCC-CCCCCcc--c---eecHHHH---hhhhccCC
Confidence 346789999987 5666764 57777 67789999999999999864 4444431 1 2333333 33234578
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 214 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~ 214 (414)
+++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++ ..+.+
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~ 244 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-QFDPLLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVA 244 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEE
Confidence 999999999999999999999999999999999887 489999999999999999999999999999864333 46788
Q ss_pred CCCc-EEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHH
Q 014997 215 EDGS-TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 290 (414)
Q Consensus 215 ~~g~-~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~ 290 (414)
++|+ ++++|.||+|+|++|++++ ++++|++.+ +|+|.||++++|+.|+|||+|||+..+ ..+..|.
T Consensus 245 ~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~ 314 (463)
T 2r9z_A 245 QDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITGRD----------QLTPVAI 314 (463)
T ss_dssp TTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGTSC----------CCHHHHH
T ss_pred eCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCCCc----------ccHHHHH
Confidence 8998 8999999999999999874 577888875 677999999999999999999998642 2567799
Q ss_pred HHHHHHHHHHhcCCC---CCCCCCCceeeeccCCCCCCcceeeeEeecCCC--------cEEE------------EcCCC
Q 014997 291 QSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--------ETIE------------IGNFD 347 (414)
Q Consensus 291 ~~a~~aa~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~--------~~~~------------~~~~~ 347 (414)
.||+.+|.||++... ..|..+|+. .|..+. +..+|.... .... .....
T Consensus 315 ~~g~~aa~~i~g~~~~~~~~~~~~p~~---~~~~~~------~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 385 (463)
T 2r9z_A 315 AAGRRLAERLFDGQSERKLDYDNIPTV---VFAHPP------LSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEHGP 385 (463)
T ss_dssp HHHHHHHHHHHSCCTTCCCCCSSCCEE---ECCSSC------EEEEECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCC
T ss_pred HHHHHHHHHHcCCCCcccCCCCCCCEE---EeCCCC------eEEEcCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCC
Confidence 999999999997432 235556653 232211 334443211 1111 01112
Q ss_pred CcEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCCh-hh-hcCCCcHHHHHHHHh
Q 014997 348 PKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK-AK-LQQASSVEEALEIAR 405 (414)
Q Consensus 348 ~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 405 (414)
..|.+++++ +++|+|++++...+.++... ..+|+.+.+++. .. +..||+++|++.+++
T Consensus 386 ~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 448 (463)
T 2r9z_A 386 KTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLK 448 (463)
T ss_dssp CEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGCCC
T ss_pred cEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHH
Confidence 346777775 69999999866667665544 445788888777 22 688999999988755
No 38
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.1e-34 Score=292.55 Aligned_cols=327 Identities=19% Similarity=0.276 Sum_probs=245.3
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
++++.+++++.+ ++..+++....|.+.+| +.+.||+||||||++|..+|. ++.+.+.+++ +..+......
T Consensus 108 ~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~-~~~~~~~v~~------~~~~~~~~~~ 179 (476)
T 3lad_A 108 LIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPP-APVDQDVIVD------STGALDFQNV 179 (476)
T ss_dssp HHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTT-SCCCSSSEEE------HHHHTSCSSC
T ss_pred HHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCC-CCCCcccEEe------chhhhccccC
Confidence 455679999986 56667777778888777 579999999999999864443 3333345554 2333333346
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++ + .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v 256 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-AVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ-V-TV 256 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC-E-EE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-ccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE-E-EE
Confidence 79999999999999999999999999999999999997 589999999999999999999999999999865433 2 45
Q ss_pred EeCCC---cEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccH
Q 014997 213 KLEDG---STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 286 (414)
Q Consensus 213 ~~~~g---~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~ 286 (414)
.+.++ +++++|.||+|+|++|++++ ++++++..+ +|+|.||+++||+.|+|||+|||+..+. .+
T Consensus 257 ~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~----------~~ 326 (476)
T 3lad_A 257 KFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGAM----------LA 326 (476)
T ss_dssp EEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSCC----------CH
T ss_pred EEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEccCCCcc----------cH
Confidence 55544 67999999999999999874 677888875 5789999999999999999999996432 46
Q ss_pred HHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc------EEEEcC-------------C
Q 014997 287 DHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------TIEIGN-------------F 346 (414)
Q Consensus 287 ~~A~~~a~~aa~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~------~~~~~~-------------~ 346 (414)
..|..||+.+|+||++... ..+..+|+. .|..+ .+..+|..+.+ -+..+. .
T Consensus 327 ~~A~~~g~~aa~~i~g~~~~~~~~~~p~~---~~~~~------~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (476)
T 3lad_A 327 HKASEEGVVVAERIAGHKAQMNYDLIPAV---IYTHP------EIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAAND 397 (476)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCCTTCCCEE---ECSSS------EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCCEE---EECcC------CEEEeeCCHHHHHhcCCCEEEEEEeccccchheecCC
Confidence 6799999999999997432 234456653 33321 14455544321 011110 1
Q ss_pred CCcEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCCCcc
Q 014997 347 DPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDKA-K-LQQASSVEEALEIARAALPVE 411 (414)
Q Consensus 347 ~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 411 (414)
..-+.++.++ +++|+|+++++.++.++... ..+|+.+.+++.- . +..||++.|++.+|+..+...
T Consensus 398 ~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~ 467 (476)
T 3lad_A 398 TAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALAVSGH 467 (476)
T ss_dssp CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHHHHTTC
T ss_pred CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHHHhcc
Confidence 1236677665 58999999977777776544 4467888888873 2 689999999999998776543
No 39
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=4.3e-35 Score=293.77 Aligned_cols=323 Identities=20% Similarity=0.280 Sum_probs=238.5
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 133 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~ 133 (414)
+++++.+++++.++ +..+++....|.+ +|+++.||+||||||++|.. |+.++.+.+++++ ..+. ......+
T Consensus 97 ~~~~~~~v~~~~g~-~~~i~~~~~~v~~-~g~~~~~d~lviAtG~~p~~-~~~~g~~~~~v~~---~~~~---~~~~~~~ 167 (455)
T 2yqu_A 97 FLFKKNGIARHQGT-ARFLSERKVLVEE-TGEELEARYILIATGSAPLI-PPWAQVDYERVVT---STEA---LSFPEVP 167 (455)
T ss_dssp HHHHHHTCEEEESC-EEESSSSEEEETT-TCCEEEEEEEEECCCEEECC-CTTBCCCSSSEEC---HHHH---TCCSSCC
T ss_pred HHHHhCCCEEEEeE-EEEecCCeEEEee-CCEEEEecEEEECCCCCCCC-CCCCCCCcCcEec---hHHh---hccccCC
Confidence 45667899999975 4445543333433 67789999999999999864 4445543334432 2322 2222357
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 213 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 213 (414)
++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||+++++++|++++.+++ . ..+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~-v~v~ 244 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-TMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-G-ARVE 244 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-E-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-ccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-E-EEEE
Confidence 8999999999999999999999999999999999887 58899999999999999999999999999986433 2 3567
Q ss_pred eCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHH
Q 014997 214 LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 290 (414)
Q Consensus 214 ~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~ 290 (414)
+++|+++++|.||+|+|.+|+.++ ++++|+..+ +|+|.||++++|+.|+|||+|||+..+. .+..|.
T Consensus 245 ~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~----------~~~~A~ 314 (455)
T 2yqu_A 245 LEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGPM----------LAHKAS 314 (455)
T ss_dssp ETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSCC----------CHHHHH
T ss_pred ECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCcc----------CHHHHH
Confidence 778889999999999999999887 678888865 4779999999999999999999987532 456799
Q ss_pred HHHHHHHHHHhcCCCCCC--CCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE-------------EcCCCC
Q 014997 291 QSAQHCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-------------IGNFDP 348 (414)
Q Consensus 291 ~~a~~aa~~i~~~~~~~~--~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~-------------~~~~~~ 348 (414)
.||+.+|+||++. ...+ ..+|++ ..++. .+..+|.... +... .++ ..
T Consensus 315 ~~g~~aa~~i~~~-~~~~~~~~~p~~--~~~~~-------~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 383 (455)
T 2yqu_A 315 EEGIAAVEHMVRG-FGHVDYQAIPSV--VYTHP-------EIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGE-TE 383 (455)
T ss_dssp HHHHHHHHHHHHS-CCCCCGGGCCEE--ECSSS-------EEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTC-CC
T ss_pred HhHHHHHHHHcCC-CccCCCCCCCEE--EEcCC-------ceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCC-Cc
Confidence 9999999999974 3333 334542 22221 1334443221 1111 111 23
Q ss_pred cEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCCC
Q 014997 349 KIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDKA-K-LQQASSVEEALEIARAALP 409 (414)
Q Consensus 349 ~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 409 (414)
.+.+++++ +++|+|+.++...+.++ ..+..+|+.+.+++.- . ...||++.|++.+|+..+.
T Consensus 384 ~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~~~~ 449 (455)
T 2yqu_A 384 GFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAALAAW 449 (455)
T ss_dssp CEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHHHHH
T ss_pred EEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 47788775 79999999865555554 4455567899988872 2 7899999999999987544
No 40
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.9e-35 Score=291.98 Aligned_cols=320 Identities=17% Similarity=0.234 Sum_probs=236.2
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 133 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~ 133 (414)
+++++.||+++.++.+ .++ .++|.+++ +++.||+||||||++|+.+|.++. + ..+. +..+.. .....+
T Consensus 104 ~~~~~~gv~~~~g~~~-~~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~-~-~~v~---~~~~~~---~~~~~~ 171 (458)
T 1lvl_A 104 ALLKKHGVKVVHGWAK-VLD--GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPL-G-GPVI---SSTEAL---APKALP 171 (458)
T ss_dssp HHHHHTTCEEECSCEE-EEE--TTEEEETT-EEEECSEEEECCCEEECCBTTBCC-B-TTEE---CHHHHT---CCSSCC
T ss_pred HHHHhCCcEEEEEEEE-Ecc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCc-c-CcEe---cHHHHh---hhhccC
Confidence 4567889999998544 455 46888876 779999999999999865442331 1 1232 333332 222357
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 213 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 213 (414)
++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++. + . ..+.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~-~-v~v~ 246 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKKLGIALHLGHSVEGYEN--G-C-LLAN 246 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCEEETTCEEEEEET--T-E-EEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe--C-C-EEEE
Confidence 9999999999999999999999999999999999997 68999999999999999999999999999984 2 2 2444
Q ss_pred eCCC--cEEecCEEEEccCCcCCChh--hhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHH
Q 014997 214 LEDG--STIDADTIVIGIGAKPTVSP--FERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 289 (414)
Q Consensus 214 ~~~g--~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A 289 (414)
.++| +++++|.||+|+|.+|+.++ ++++|+..++++|.||+++||+.|+|||+|||+..+. .+..|
T Consensus 247 ~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iya~GD~~~~~~----------~~~~A 316 (458)
T 1lvl_A 247 DGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVWAIGDVAGEPM----------LAHRA 316 (458)
T ss_dssp CSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEEECGGGGCSSC----------CHHHH
T ss_pred ECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEEEeeccCCCcc----------cHHHH
Confidence 4456 68999999999999999886 5788888753389999999999999999999998542 46679
Q ss_pred HHHHHHHHHHHhcCCCCC--CCCCCceeeeccCCCCCCcceeeeEeecCCC-------cEEE--E----------cCCCC
Q 014997 290 RQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE--I----------GNFDP 348 (414)
Q Consensus 290 ~~~a~~aa~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~-------~~~~--~----------~~~~~ 348 (414)
..||+.+|+||++. ..+ +..+|++ ..++. .+..+|.... +... . .....
T Consensus 317 ~~~g~~aa~~i~g~-~~~~~~~~~p~~--~~~~p-------~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 386 (458)
T 1lvl_A 317 MAQGEMVAEIIAGK-ARRFEPAAIAAV--CFTDP-------EVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKS 386 (458)
T ss_dssp HHHHHHHHHHHTTC-CCCCCCSCCCEE--ECSSS-------EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCC
T ss_pred HHHHHHHHHHhcCC-CccCCCCCCCEE--EECCC-------CeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCc
Confidence 99999999999973 333 3445543 22221 1333443211 1111 0 01123
Q ss_pred cEEEEEEe--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcCCCc
Q 014997 349 KIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVDKA-K-LQQASSVEEALEIARAALPV 410 (414)
Q Consensus 349 ~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 410 (414)
.+.+++++ +++|+|++++...+.++ ..+..+|+.+.+++.- . +..||+++|++.+|++.+..
T Consensus 387 g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~~~~ 453 (458)
T 1lvl_A 387 GFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAALRALG 453 (458)
T ss_dssp CEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHHHHHTT
T ss_pred EEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHHHhc
Confidence 47778774 69999999866665554 4555678888888872 2 68899999999999876543
No 41
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-34 Score=292.52 Aligned_cols=326 Identities=19% Similarity=0.294 Sum_probs=242.3
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCC--CCCEEEecCHHHHHHHHHh
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGY--LPGVHYIRDVADADALISS 129 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~--~~gv~~~~~~~~~~~~~~~ 129 (414)
.++++.+++++.+ ++..+++....|.+.+| +++.||+||||||++|..+ +|.. ..+.... + +..+...
T Consensus 123 ~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~i---pg~~~~~~~~~~~-~---~~~~~~~ 194 (491)
T 3urh_A 123 FLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGI---PGVEVAFDEKTIV-S---STGALAL 194 (491)
T ss_dssp HHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCB---TTBCCCCCSSSEE-C---HHHHTSC
T ss_pred HHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCC---CCcccccCCeeEE-e---hhHhhhh
Confidence 3456789999986 56667766667777777 5799999999999986433 3432 2332222 2 2333333
Q ss_pred hcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcE
Q 014997 130 LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 209 (414)
Q Consensus 130 ~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 209 (414)
...+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.+++++.++++.
T Consensus 195 ~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~- 272 (491)
T 3urh_A 195 EKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-GMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGA- 272 (491)
T ss_dssp SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-SSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEE-
T ss_pred hhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-cCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEE-
Confidence 34689999999999999999999999999999999999987 4899999999999999999999999999998653332
Q ss_pred EEEEeCC---C--cEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCccc
Q 014997 210 AAVKLED---G--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 281 (414)
Q Consensus 210 ~~v~~~~---g--~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~ 281 (414)
.+.+.+ | +++++|.||+|+|++|++++ +++.|+..+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 273 -~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~------- 344 (491)
T 3urh_A 273 -KVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGPM------- 344 (491)
T ss_dssp -EEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSCC-------
T ss_pred -EEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCcc-------
Confidence 344432 4 58999999999999999986 678888875 5779999999999999999999996542
Q ss_pred ccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc-------EEE-E---------
Q 014997 282 RVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I--------- 343 (414)
Q Consensus 282 ~~~~~~~A~~~a~~aa~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-------~~~-~--------- 343 (414)
.+..|..||+.+|++|++... ..+..+|+. .|..+ .+..+|..+.+ ... .
T Consensus 345 ---~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~---~~~~p------~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~ 412 (491)
T 3urh_A 345 ---LAHKAEDEGVAVAEIIAGQAGHVNYDVIPGV---VYTQP------EVASVGKTEEELKAAGVAYKIGKFPFTANGRA 412 (491)
T ss_dssp ---CHHHHHHHHHHHHHHHTTSCCCCCTTCCCEE---ECSSS------CEEEEECCHHHHHHTTCCEEEEEEEGGGCHHH
T ss_pred ---chhHHHHHHHHHHHHHcCCCcccCCCCCCEE---EEccC------CeEEEeCCHHHHHhCCCCEEEEEEecCcchhh
Confidence 566799999999999997432 224445653 23322 14455544321 110 0
Q ss_pred ---cCCCCcEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCChhh--hcCCCcHHHHHHHHhcCCCc
Q 014997 344 ---GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDKAK--LQQASSVEEALEIARAALPV 410 (414)
Q Consensus 344 ---~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 410 (414)
++ ..-+.++.++ +++|+|+++++.++.++... ..+|+.+.+++.-. ...||++.|++.+|+..+..
T Consensus 413 ~~~~~-~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~ 486 (491)
T 3urh_A 413 RAMLQ-TDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFF 486 (491)
T ss_dssp HHTTC-CCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHHHHC
T ss_pred hcCCC-CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHHhhh
Confidence 11 1236677665 59999999977777776544 45678898888832 68999999999999876654
No 42
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.8e-34 Score=290.95 Aligned_cols=319 Identities=19% Similarity=0.231 Sum_probs=237.4
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCC--CCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~--~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
.+++.+++++.+ ++..+++....|.. +++++.||+||||||++|..++ .++|.+ ...+ ++.+......
T Consensus 117 ~~~~~gv~~~~g-~~~~~~~~~~~v~~-~g~~~~~d~lviAtG~~p~~p~~~~i~G~~-----~~~~---~~~~~~~~~~ 186 (478)
T 3dk9_A 117 NLTKSHIEIIRG-HAAFTSDPKPTIEV-SGKKYTAPHILIATGGMPSTPHESQIPGAS-----LGIT---SDGFFQLEEL 186 (478)
T ss_dssp HHHHTTCEEEES-CEEECSCSSCEEEE-TTEEEECSCEEECCCEEECCCCTTTSTTGG-----GSBC---HHHHTTCCSC
T ss_pred HHHhCCcEEEEe-EEEEeeCCeEEEEE-CCEEEEeeEEEEccCCCCCCCCcCCCCCCc-----eeEc---hHHhhchhhc
Confidence 345679999986 67777777777774 6778999999999999886431 444422 2222 2333333345
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.+++++..+++....+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 265 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSM 265 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEE
Confidence 79999999999999999999999999999999999986 58999999999999999999999999999987655533356
Q ss_pred EeCC---C----cEEecCEEEEccCCcCCCh-h-hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccc
Q 014997 213 KLED---G----STIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 282 (414)
Q Consensus 213 ~~~~---g----~~i~~D~vi~a~G~~p~~~-~-l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~ 282 (414)
.+.+ | +++++|.||+|+|++|+++ + ++++|++.+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 266 ~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~-------- 337 (478)
T 3dk9_A 266 VTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKAL-------- 337 (478)
T ss_dssp EECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGGGCSSC--------
T ss_pred EEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEecCCCCc--------
Confidence 6665 2 5799999999999999987 3 678898874 6789999999999999999999995432
Q ss_pred cccHHHHHHHHHHHHHHHhcCC-C--CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc---------EEEE-----c-
Q 014997 283 VEHVDHARQSAQHCIKALLSAQ-T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIEI-----G- 344 (414)
Q Consensus 283 ~~~~~~A~~~a~~aa~~i~~~~-~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~~~~-----~- 344 (414)
.+..|..||+.+|+||++.. . ..|..+|+. .|..+ .+..+|..+.+ .... .
T Consensus 338 --~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~ 406 (478)
T 3dk9_A 338 --LTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTV---VFSHP------PIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 406 (478)
T ss_dssp --CHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEE---ECCSS------CEEEEECCHHHHHHHHCGGGEEEEEEEECCG
T ss_pred --cHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeE---EECCC------ceEEeeCCHHHHHhhCCCccEEEEEeecCcc
Confidence 46679999999999999752 2 245556653 34322 13445543211 1100 0
Q ss_pred ------CCCCcEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCChh-h-hcCCCcHHHHHHH
Q 014997 345 ------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDKA-K-LQQASSVEEALEI 403 (414)
Q Consensus 345 ------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~-~-~~~~~~~~~~~~~ 403 (414)
+...-+.++.++ +++|+|+++++.++.++... ..+|+.+.+++.- . +..||++.|++..
T Consensus 407 ~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 476 (478)
T 3dk9_A 407 YHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVT 476 (478)
T ss_dssp GGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGS
T ss_pred hhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHh
Confidence 011236677664 59999999977777776544 4467888888882 2 7899999998753
No 43
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-34 Score=294.47 Aligned_cols=324 Identities=19% Similarity=0.226 Sum_probs=217.4
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeC----CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITN----SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 130 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~----~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 130 (414)
.+++.+|+++.+ ...-+++..-.|... +++++.+|++|||||++|..+|.+++ ....+ + + ++.+....
T Consensus 149 ~l~~~~V~~i~G-~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~~~~~-~~~~~--~-t---s~~~l~l~ 220 (542)
T 4b1b_A 149 GLRSSKVKYING-LAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDVEG-AKELS--I-T---SDDIFSLK 220 (542)
T ss_dssp HHHHTTCEEECE-EEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCSSSBT-HHHHC--B-C---HHHHTTCS
T ss_pred HHHhCCCEEEee-eEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCCcccC-CCccc--c-C---chhhhccc
Confidence 356789999886 555555544344333 34579999999999999975433221 11111 1 1 34444444
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
..+++++|||||++|+|+|..++++|.+||++++ +++++ .++++++..+.+.|++.||+++++..+++++..++ . .
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~-~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~-~ 296 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLR-GFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-K-I 296 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSST-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-E-E
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-ccccc-ccchhHHHHHHHHHHhhcceeecceEEEEEEecCC-e-E
Confidence 5689999999999999999999999999999987 46776 58999999999999999999999999999986533 3 3
Q ss_pred EEEeCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCC-EEEcCCCCCCCCcEEEEcccccc-CCccCCccccccc
Q 014997 211 AVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGG-IQVDGQFRTRMPGIFAIGDVAAF-PLKMYDRTARVEH 285 (414)
Q Consensus 211 ~v~~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~-i~vd~~~~t~~~~IyA~GD~a~~-~~~~~~~~~~~~~ 285 (414)
.+.+.++.++.+|.|++|+|++||++. ++.+++..+ +++ |.+|+++||+.|+|||+|||+.. +. .
T Consensus 297 ~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~----------L 366 (542)
T 4b1b_A 297 LVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPE----------L 366 (542)
T ss_dssp EEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCC----------C
T ss_pred EEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCchh----------H
Confidence 678888889999999999999999986 456777764 344 57889999999999999999853 22 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCcE----------EE-----------
Q 014997 286 VDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGET----------IE----------- 342 (414)
Q Consensus 286 ~~~A~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~~----------~~----------- 342 (414)
...|..+|+.++.|+++.... .|..+|+. +|..+- +..+|..+.+. +.
T Consensus 367 a~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~---vft~Pe------iA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~ 437 (542)
T 4b1b_A 367 APVAIKAGEILARRLFKDSDEIMDYSYIPTS---IYTPIE------YGACGYSEEKAYELYGKSNVEVFLQEFNNLEISA 437 (542)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCCCCSSCCEE---ECSSSC------EEEEECCHHHHHHHHCTTTEEEEEC---------
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCCCCceE---EeCCCC------eEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhh
Confidence 445889999999999975543 35557763 444331 33344332100 00
Q ss_pred -------Ec--------CCCCcEEEEEE-e--CCEEEEEEeecCChHHhhHHHH-HHhCCCCCCh-hh-hcCCCcHHHHH
Q 014997 343 -------IG--------NFDPKIATFWI-D--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVDK-AK-LQQASSVEEAL 401 (414)
Q Consensus 343 -------~~--------~~~~~~~~~~~-~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~~-~~-~~~~~~~~~~~ 401 (414)
.. ....-|.++.. + +++|+|++++..++.++...-. +|+.+.+++. .. +..||+++|++
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HPTlsE~l 517 (542)
T 4b1b_A 438 VHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESF 517 (542)
T ss_dssp --------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC-----------
T ss_pred hhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCCCHHHHH
Confidence 00 00112455543 3 5899999998778888766554 5688888887 33 78999999999
Q ss_pred HHHhcCCC
Q 014997 402 EIARAALP 409 (414)
Q Consensus 402 ~~~~~~~~ 409 (414)
.++..++.
T Consensus 518 ~~~~~t~~ 525 (542)
T 4b1b_A 518 MNLFVTIS 525 (542)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 99887764
No 44
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.8e-35 Score=295.94 Aligned_cols=271 Identities=21% Similarity=0.291 Sum_probs=207.7
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh-HH--HHcCCeEEcCCcEEEEeCCCCEE
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE-WY--KEKGIEMIYQDPVTSIDIEKQTL 79 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~-~~--~~~~i~~~~~~~V~~id~~~~~V 79 (414)
+-+||||++++++.| +|.|.. +..|. ....++ ..+.. .+ .+.+++++.+ +|++||+++++|
T Consensus 65 ~~~VtLId~~~~~~~-~PlL~~-va~G~-l~~~~i------------~~p~~~~~~~~~~~v~~~~~-~v~~ID~~~k~V 128 (502)
T 4g6h_A 65 KYNVSIISPRSYFLF-TPLLPS-APVGT-VDEKSI------------IEPIVNFALKKKGNVTYYEA-EATSINPDRNTV 128 (502)
T ss_dssp TCEEEEEESSSEEEC-GGGGGG-TTTTS-SCGGGG------------EEEHHHHHTTCSSCEEEEEE-EEEEEEGGGTEE
T ss_pred CCcEEEECCCCCccc-ccchhH-Hhhcc-ccHHHh------------hhhHHHHHHhhcCCeEEEEE-EEEEEEhhhCEE
Confidence 458999999998766 487764 55442 111111 11222 22 2457999885 899999999998
Q ss_pred EeC--------------------CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc--------
Q 014997 80 ITN--------------------SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE-------- 131 (414)
Q Consensus 80 ~~~--------------------~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~-------- 131 (414)
+++ ++.++.||+||||||+++.. +.+||.. +..+.+++++++..++..+.
T Consensus 129 ~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~-~~ipG~~-e~a~~l~t~~dA~~ir~~l~~~~e~a~~ 206 (502)
T 4g6h_A 129 TIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT-FGIPGVT-DYGHFLKEIPNSLEIRRTFAANLEKANL 206 (502)
T ss_dssp EEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC-TTCTTHH-HHCEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc-CCccCcc-cccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 763 46689999999999999874 4445532 33477899998877654331
Q ss_pred ---------CCCeEEEECCChHHHHHHHHHHhC--------------CCcEEEEeeCCcccccccCHHHHHHHHHHHHhC
Q 014997 132 ---------KAKKVVVVGGGYIGMEVAAAAVGW--------------KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN 188 (414)
Q Consensus 132 ---------~~~~vvVvGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~ 188 (414)
...+++|||||++|+|+|..|+.+ ..+|+++++.+++++ .+++++++.+.+.|+++
T Consensus 207 ~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~-~~~~~~~~~~~~~L~~~ 285 (502)
T 4g6h_A 207 LPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN-MFEKKLSSYAQSHLENT 285 (502)
T ss_dssp SCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST-TSCHHHHHHHHHHHHHT
T ss_pred ccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc-CCCHHHHHHHHHHHHhc
Confidence 124799999999999999998754 267999999999998 58999999999999999
Q ss_pred CcEEEcCceEEEEEecCCCcEEEEEeCCCc----EEecCEEEEccCCcCCC---hhhhhcCCcc-cCCCEEEcCCCCC-C
Q 014997 189 GVKFVKGASIKNLEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTV---SPFERVGLNS-SVGGIQVDGQFRT-R 259 (414)
Q Consensus 189 gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~----~i~~D~vi~a~G~~p~~---~~l~~~gl~~-~~g~i~vd~~~~t-~ 259 (414)
||++++++.|++++. ++......+.||+ +++||+||||+|.+|+. ++....++.. ++|+|.||++||| +
T Consensus 286 GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~ 363 (502)
T 4g6h_A 286 SIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKG 363 (502)
T ss_dssp TCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTT
T ss_pred ceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCC
Confidence 999999999999963 4444455667764 69999999999999983 2334555554 3578999999998 8
Q ss_pred CCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 260 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 260 ~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
+|||||+|||+..+.++ ..+.|.+||+++|+||.+
T Consensus 364 ~~~IfAiGD~a~~~~p~--------~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 364 SNNIFAIGDNAFAGLPP--------TAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp CSSEEECGGGEESSSCC--------CHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcccCCCCCC--------chHHHHHHHHHHHHHHHH
Confidence 99999999999876543 567799999999999964
No 45
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-34 Score=288.94 Aligned_cols=321 Identities=21% Similarity=0.303 Sum_probs=243.1
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEe-CCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLIT-NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~-~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
.++++.+++++.+ ++..++ .+.|.+ .+++.+.||+||||||++|...|.++|.+ ...+.. .+......
T Consensus 101 ~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~-----~~~~~~---~~~~~~~~ 169 (463)
T 4dna_A 101 KGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHE-----LCITSN---EAFDLPAL 169 (463)
T ss_dssp HHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGG-----GCBCHH---HHTTCSSC
T ss_pred HHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCcc-----ccccHH---HHhhhhcC
Confidence 3455679999987 676654 467877 57788999999999999886234444432 222333 33333345
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++. ..+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v 247 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS-RFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVA 247 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEE
Confidence 89999999999999999999999999999999999886 5899999999999999999999999999998754554 367
Q ss_pred E-eCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHH
Q 014997 213 K-LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDH 288 (414)
Q Consensus 213 ~-~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~ 288 (414)
. +++|+ +++|.||+|+|++|++.+ +++.|++.+ +|+|.||+++||+.|+|||+|||+..+. .+..
T Consensus 248 ~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~----------~~~~ 316 (463)
T 4dna_A 248 TTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRVQ----------LTPV 316 (463)
T ss_dssp EESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSSCC----------CHHH
T ss_pred EEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCCCCC----------ChHH
Confidence 7 88887 999999999999999887 788898875 5789999999999999999999997432 5667
Q ss_pred HHHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc------EEEEc-----C--------CC
Q 014997 289 ARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------TIEIG-----N--------FD 347 (414)
Q Consensus 289 A~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~------~~~~~-----~--------~~ 347 (414)
|..||+.+|+||++.... .+..+|+. .|..+ .+..+|..+.+ .+..+ . ..
T Consensus 317 A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (463)
T 4dna_A 317 AIHEAMCFIETEYKNNPTSPDHDLIATA---VFSQP------EIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKE 387 (463)
T ss_dssp HHHHHHHHHHHHHSSCCCCCCCSCCCEE---ECSSS------CEEEEECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCC
T ss_pred HHHHHHHHHHHHcCCCCcccCCCCCCEE---EECCC------CeEEecCCHHHHHHcCCCeEEEEEeccccchhhcCCCc
Confidence 999999999999975433 34445553 34322 14455544321 01100 0 11
Q ss_pred CcEEEEEEe--CCEEEEEEeecCChHHhhHHH-HHHhCCCCCChh-h-hcCCCcHHHHHHHHhcC
Q 014997 348 PKIATFWID--SGKLKGVLVESGSPEEFQLLP-TLARSQPFVDKA-K-LQQASSVEEALEIARAA 407 (414)
Q Consensus 348 ~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~-~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 407 (414)
.-+.++.++ +++|+|+++++.++.++...- .+|+.+.+++.- . +..||++.|++.+++..
T Consensus 388 ~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 452 (463)
T 4dna_A 388 KTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMYQP 452 (463)
T ss_dssp CEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCCCSC
T ss_pred eEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHhhh
Confidence 236677765 589999999777777766544 467888888873 3 78999999999988754
No 46
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.1e-34 Score=290.79 Aligned_cols=321 Identities=20% Similarity=0.217 Sum_probs=237.6
Q ss_pred HHHcCCeEEcCCcEEEEeCCCCEEEeCCCc-EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCC
Q 014997 56 YKEKGIEMIYQDPVTSIDIEKQTLITNSGK-LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 134 (414)
Q Consensus 56 ~~~~~i~~~~~~~V~~id~~~~~V~~~~g~-~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 134 (414)
+++.+|+++.+ .+..+++....|.+.+|+ ++.||+||||||++|+. |.++|.+.. ..+. ..+......++
T Consensus 118 ~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~-p~i~G~~~~----~~~~---~~~~~~~~~~~ 188 (483)
T 3dgh_A 118 LRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRY-PDIPGAVEY----GITS---DDLFSLDREPG 188 (483)
T ss_dssp HHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECC-CSSTTHHHH----CBCH---HHHTTCSSCCC
T ss_pred HHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCC-CCCCCcccc----cCcH---HHHhhhhhcCC
Confidence 56679999986 677788777777777774 79999999999999864 444443211 1122 23333234578
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 214 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~ 214 (414)
+++|||+|++|+|+|..|+++|.+|+++++. .+++ .+++++.+.+.+.+++.||++++++.+++++..+++.+ .+.+
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~ 265 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLR-GFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKY 265 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSST-TSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEE
T ss_pred cEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCc-ccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEE
Confidence 9999999999999999999999999999884 5665 57999999999999999999999999999986545543 4566
Q ss_pred CCCc-----EEecCEEEEccCCcCCChhh--hhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHH
Q 014997 215 EDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 287 (414)
Q Consensus 215 ~~g~-----~i~~D~vi~a~G~~p~~~~l--~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~ 287 (414)
.++. ++++|.|++|+|++|+++++ +++|++.++|+|.||++++|+.|+|||+|||+.... ..+.
T Consensus 266 ~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~ 336 (483)
T 3dgh_A 266 KNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDIIYGKP---------ELTP 336 (483)
T ss_dssp EETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCCTTCBCSSTTEEECSTTBTTSC---------CCHH
T ss_pred ecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEECcCCccCCCCEEEEEcccCCCC---------ccHH
Confidence 5543 79999999999999999876 788988766889999999999999999999984211 1566
Q ss_pred HHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc---------EE-EE----c-------
Q 014997 288 HARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TI-EI----G------- 344 (414)
Q Consensus 288 ~A~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~~-~~----~------- 344 (414)
.|..||+.+|+||++.... .+..+|+. .|..+ .+..+|..+.+ .. .. .
T Consensus 337 ~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (483)
T 3dgh_A 337 VAVLAGRLLARRLYGGSTQRMDYKDVATT---VFTPL------EYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQ 407 (483)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCCTTCCEE---ECSSS------EEEEEECCHHHHHHHHCGGGEEEEEEECCCGGGTTTT
T ss_pred HHHHHHHHHHHHHcCCCCCcCCCCCCCEE---EECCC------ccEEEeCCHHHHHhhCCCCCEEEEEEeecchhhhhhc
Confidence 7999999999999975432 35556654 23221 13445543210 11 10 0
Q ss_pred -CCCCcEEEEEEe---CCEEEEEEeecCChHHhhHH-HHHHhCCCCCChh-h-hcCCCcHHHHHHHHhc
Q 014997 345 -NFDPKIATFWID---SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDKA-K-LQQASSVEEALEIARA 406 (414)
Q Consensus 345 -~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ 406 (414)
....-|.++.++ +++|+|+++++.++.++... ..+|+.+.+++.- . +..||+++|++..+..
T Consensus 408 ~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 476 (483)
T 3dgh_A 408 KSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAI 476 (483)
T ss_dssp CCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGGCCC
T ss_pred cCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHh
Confidence 011236777664 48999999977777776544 4467888888873 3 6899999999887653
No 47
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=3e-34 Score=290.05 Aligned_cols=324 Identities=20% Similarity=0.251 Sum_probs=236.8
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
.+++.+|+++.+ ++..+++....|.+.+| .++.||+||||||++|..++.++|.+... .+ +..+......
T Consensus 113 ~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~i~G~~~~~----~~---~~~~~~~~~~ 184 (488)
T 3dgz_A 113 QLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYG----IT---SDDIFWLKES 184 (488)
T ss_dssp HHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSSCBTHHHHC----BC---HHHHTTCSSC
T ss_pred HHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCCCCCccccc----Cc---HHHHHhhhhc
Confidence 355679999875 67777777667777777 47999999999999987433255532111 12 2333333345
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|+++|.+|+++++. .+++ .+++++.+.+.+.+++.||++++++.++++...+++.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v 261 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QV 261 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccc-cCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EE
Confidence 789999999999999999999999999999986 4555 57999999999999999999999999999986444433 34
Q ss_pred EeCC---Cc--EEecCEEEEccCCcCCChh--hhhcCCccc--CCCEEEcCCCCCCCCcEEEEccccccCCccCCccccc
Q 014997 213 KLED---GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 283 (414)
Q Consensus 213 ~~~~---g~--~i~~D~vi~a~G~~p~~~~--l~~~gl~~~--~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~ 283 (414)
.+.+ |+ ++++|.|++|+|++|++++ ++++++..+ +|+|.||+++||+.|+|||+|||+....
T Consensus 262 ~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~--------- 332 (488)
T 3dgz_A 262 TWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRP--------- 332 (488)
T ss_dssp EEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECGGGBTTCC---------
T ss_pred EEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEEEeEEecCCCC---------
Confidence 4433 54 4899999999999999987 678888875 6789999999999999999999985211
Q ss_pred ccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc---------E-EEEc-------
Q 014997 284 EHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------T-IEIG------- 344 (414)
Q Consensus 284 ~~~~~A~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~-~~~~------- 344 (414)
..+..|..||+.+|.||++.... .+..+|+.. |..+ .+..+|....+ . +...
T Consensus 333 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~---~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~ 403 (488)
T 3dgz_A 333 ELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTV---FTPL------EYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEF 403 (488)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEE---CSSS------EEEEEECCHHHHHHHHCGGGEEEEEEECCCHHH
T ss_pred cchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEE---ECCC------CeEEEeCCHHHHHhhCCCCcEEEEEccccchhh
Confidence 15667999999999999975432 355567643 3221 14445543210 1 1110
Q ss_pred -----CCCCcEEEEEEe---CCEEEEEEeecCChHHhhHH-HHHHhCCCCCChh-h-hcCCCcHHHHHHHHhcC
Q 014997 345 -----NFDPKIATFWID---SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDKA-K-LQQASSVEEALEIARAA 407 (414)
Q Consensus 345 -----~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 407 (414)
+...-+.++.++ +++|+|+++++.++.++... ..+|+.+.+++.- . +..||+++|++..+...
T Consensus 404 ~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 477 (488)
T 3dgz_A 404 TVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHIS 477 (488)
T ss_dssp HHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHTCCEE
T ss_pred hhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHHH
Confidence 002236677665 49999999977777776544 4467889888883 2 78999999999887543
No 48
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=3.9e-34 Score=289.28 Aligned_cols=318 Identities=17% Similarity=0.156 Sum_probs=234.4
Q ss_pred CCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCCCeEEEE
Q 014997 60 GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVV 139 (414)
Q Consensus 60 ~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVv 139 (414)
+++++.+ ++.-. +.++|.+++++++.||+||||||++|.. |.+++...+++++ +..+......+++++||
T Consensus 111 ~~~~~~g-~a~~~--~~~~v~~~~~~~~~~d~lViATGs~p~~-p~~~~~~~~~v~t------~~~~~~~~~~~k~vvVi 180 (492)
T 3ic9_A 111 EQDKIRG-FAKFL--DEHTLQVDDHSQVIAKRIVIATGSRPNY-PEFLAAAGSRLLT------NDNLFELNDLPKSVAVF 180 (492)
T ss_dssp GGGEEES-CEEEE--ETTEEEETTTEEEEEEEEEECCCEECCC-CHHHHTTGGGEEC------HHHHTTCSSCCSEEEEE
T ss_pred CeeEEEE-EEEEe--cCCEEEEcCCcEEEeCEEEEccCCCCcC-CCCCCccCCcEEc------HHHHhhhhhcCCeEEEE
Confidence 4555554 34333 3568888888899999999999999874 4333333334443 23333333468999999
Q ss_pred CCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeC--CC
Q 014997 140 GGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DG 217 (414)
Q Consensus 140 GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~--~g 217 (414)
|+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++. |++++++.+++++.++++ + .+.+. +|
T Consensus 181 GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~-v-~v~~~~~~G 256 (492)
T 3ic9_A 181 GPGVIGLELGQALSRLGVIVKVFGRSGSVAN-LQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDA-V-EVIYFDKSG 256 (492)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECCTTCCTT-CCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSS-E-EEEEECTTC
T ss_pred CCCHHHHHHHHHHHHcCCeEEEEEECCcccc-cCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCE-E-EEEEEeCCC
Confidence 9999999999999999999999999999986 58999999999999988 999999999999865443 3 35553 67
Q ss_pred --cEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEc-CCCCCCCCcEEEEccccccCCccCCcccccccHHHHHH
Q 014997 218 --STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVD-GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQ 291 (414)
Q Consensus 218 --~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~ 291 (414)
++++||.|++|+|++|++++ ++++|++.+ +|+|.|| +++||+.|+|||+|||+..+. .+..|..
T Consensus 257 ~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~----------~~~~A~~ 326 (492)
T 3ic9_A 257 QKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLT----------LLHEAAD 326 (492)
T ss_dssp CEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSC----------SHHHHHH
T ss_pred ceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCc----------cHHHHHH
Confidence 68999999999999999988 788899875 6789999 899999999999999997542 4667999
Q ss_pred HHHHHHHHHhcCC-CC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc-----------EEEEc-------------
Q 014997 292 SAQHCIKALLSAQ-TH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-----------TIEIG------------- 344 (414)
Q Consensus 292 ~a~~aa~~i~~~~-~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~-----------~~~~~------------- 344 (414)
||+.||.||++.. .. .+..+|+ ..|..+ .+..+|..+.+ -+..+
T Consensus 327 ~g~~aa~~i~~~~~~~~~~~~~~p~---~~~~~p------~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~ 397 (492)
T 3ic9_A 327 DGKVAGTNAGAYPVIAQGQRRAPLS---VVFTEP------QVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVM 397 (492)
T ss_dssp HHHHHHHHHHHTTSCCEECCCCCEE---EECSSS------EEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHT
T ss_pred HHHHHHHHHcCCCCCcccCCCCCcE---EEECCC------CeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhhc
Confidence 9999999999732 22 2333443 233221 13444543211 01100
Q ss_pred CCCCcEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCChh--hhcCCCcHHHHHHHHhcCCCc
Q 014997 345 NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDKA--KLQQASSVEEALEIARAALPV 410 (414)
Q Consensus 345 ~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 410 (414)
+...-+.++.++ +++|+|+++++.++.++... ..+|+.+.+++.- .+..||++.|++.+|++.+.+
T Consensus 398 ~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~~ 468 (492)
T 3ic9_A 398 GKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALRDAQQ 468 (492)
T ss_dssp TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHHHHHH
Confidence 011236677765 59999999977778777554 4567888888872 268999999999999876543
No 49
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=7.9e-34 Score=288.83 Aligned_cols=325 Identities=20% Similarity=0.235 Sum_probs=235.8
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCEEEeCCCc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
.+++.+|+++.+ ++..+++....|.+.+|+ ++.||+||||||++|+. |.++|... ...+.. .+......
T Consensus 139 ~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~-p~i~G~~~----~~~t~~---~~~~l~~~ 209 (519)
T 3qfa_A 139 ALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRY-LGIPGDKE----YCISSD---DLFSLPYC 209 (519)
T ss_dssp HHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECC-CCCTTHHH----HCBCHH---HHTTCSSC
T ss_pred HHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCC-CCCCCccC----ceEcHH---HHhhhhhc
Confidence 345679999986 788888887788877775 79999999999999864 44444211 112222 33322345
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCC---CcE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD---GRV 209 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~~~ 209 (414)
+++++|||+|++|+|+|..|+++|.+||++++. .+++ .+++++.+.+.+.+++.||++++++.++++...++ +.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~-~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~ 287 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLR-GFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL 287 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccc-cCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE
Confidence 688999999999999999999999999999985 6665 58999999999999999999999988887765322 222
Q ss_pred -EEEEeCCC-c--EEecCEEEEccCCcCCChh--hhhcCCccc--CCCEEEcCCCCCCCCcEEEEccccccCCccCCccc
Q 014997 210 -AAVKLEDG-S--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 281 (414)
Q Consensus 210 -~~v~~~~g-~--~i~~D~vi~a~G~~p~~~~--l~~~gl~~~--~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~ 281 (414)
..+...+| + ++++|.|++++|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|||+....
T Consensus 288 ~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~------- 360 (519)
T 3qfa_A 288 RVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKV------- 360 (519)
T ss_dssp EEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBSSSC-------
T ss_pred EEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccCCCC-------
Confidence 23334555 2 5789999999999999886 678888874 5789999999999999999999984211
Q ss_pred ccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc---------EEE-E---c--
Q 014997 282 RVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIE-I---G-- 344 (414)
Q Consensus 282 ~~~~~~~A~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~~~-~---~-- 344 (414)
..+..|..||+.+|+||++.... .+..+|+. .|..+ .+..+|..+.+ ... . .
T Consensus 361 --~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~ 429 (519)
T 3qfa_A 361 --ELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTT---VFTPL------EYGACGLSEEKAVEKFGEENIEVYHSYFWPL 429 (519)
T ss_dssp --CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE---ECSSS------CEEEEECCHHHHHHHHCGGGEEEEEEEECCH
T ss_pred --ccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEE---EECCC------ceEEecCCHHHHHhhCCCCCEEEEEEeccch
Confidence 25677999999999999975432 34445552 33322 14455543211 110 0 0
Q ss_pred -------CCCCcEEEEEEe---CCEEEEEEeecCChHHhhH-HHHHHhCCCCCChh--hhcCCCcHHHHHHHHhcCC
Q 014997 345 -------NFDPKIATFWID---SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDKA--KLQQASSVEEALEIARAAL 408 (414)
Q Consensus 345 -------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~-~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 408 (414)
....-|.++.++ +++|+|+++++.++.++.. +..+|+.+.+++.- .+..||++.|++..+....
T Consensus 430 ~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~~~~ 506 (519)
T 3qfa_A 430 EWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTK 506 (519)
T ss_dssp HHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGGGGGGCCCBT
T ss_pred hhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHhhh
Confidence 011336777765 4899999997777766654 44567889888883 2789999999998876543
No 50
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.9e-33 Score=283.96 Aligned_cols=321 Identities=22% Similarity=0.303 Sum_probs=240.8
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeC-CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 132 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~-~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 132 (414)
.++++.+++++.+ ++..++. +.+.+. +++.+.||+||||||++|...|.++|.+ .+. +.. .+......
T Consensus 122 ~~~~~~~v~~~~g-~~~~i~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~--~~~---~~~---~~~~~~~~ 190 (484)
T 3o0h_A 122 EGLQNSNVHIYES-RAVFVDE--HTLELSVTGERISAEKILIATGAKIVSNSAIKGSD--LCL---TSN---EIFDLEKL 190 (484)
T ss_dssp HHHHHTTCEEEES-CEEEEET--TEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG--GSB---CTT---TGGGCSSC
T ss_pred HHHHhCCCEEEEe-EEEEeeC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc--ccc---cHH---HHHhHHhc
Confidence 3456679999986 7777764 577776 7788999999999999886234445432 111 111 22222245
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++++ + .+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v-~v 267 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-NFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENC-Y-NV 267 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSS-E-EE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCE-E-EE
Confidence 79999999999999999999999999999999999887 489999999999999999999999999999865333 3 68
Q ss_pred EeCCCcEEecCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcccccccHHHH
Q 014997 213 KLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 289 (414)
Q Consensus 213 ~~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A 289 (414)
.+.+|+++++|.||+|+|++|+..+ +++.|++.+ +|+|.||++++|+.|+|||+|||+..+. .+..|
T Consensus 268 ~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~----------~~~~A 337 (484)
T 3o0h_A 268 VLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGHIQ----------LTPVA 337 (484)
T ss_dssp EETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTSCC----------CHHHH
T ss_pred EECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCCc----------CHHHH
Confidence 8899999999999999999999887 678888875 5779999999999999999999987432 56679
Q ss_pred HHHHHHHHHHHhcCCCC--CCCCCCceeeeccCCCCCCcceeeeEeecCCCc------EEEEc-------------CCCC
Q 014997 290 RQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------TIEIG-------------NFDP 348 (414)
Q Consensus 290 ~~~a~~aa~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~------~~~~~-------------~~~~ 348 (414)
..+|+.+|+||++.... .+..+|+. .|..+ .+..+|..+.+ .+..+ +...
T Consensus 338 ~~~g~~aa~~i~~~~~~~~~~~~~p~~---~~~~p------~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 408 (484)
T 3o0h_A 338 IHDAMCFVKNAFENTSTTPDYDLITTA---VFSQP------EIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEK 408 (484)
T ss_dssp HHHHHHHHHHHHC---CCCCCTTCCEE---ECCSS------CEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCC
T ss_pred HHHHHHHHHHHcCCCCCcCCCCCCcEE---EECCC------CEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCc
Confidence 99999999999975433 34555653 34322 14556654321 01100 0122
Q ss_pred cEEEEEEe--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCCh-hh-hcCCCcHHHHHHHHhcC
Q 014997 349 KIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK-AK-LQQASSVEEALEIARAA 407 (414)
Q Consensus 349 ~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 407 (414)
-+.++.++ +++|+|+.+++..+.++... ..+|+.+.+++. .. +..||++.|++.+++..
T Consensus 409 ~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 472 (484)
T 3o0h_A 409 MFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTMYKP 472 (484)
T ss_dssp EEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCCCSC
T ss_pred EEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHhhh
Confidence 36677665 58999999977777776554 446788888887 33 78999999999988754
No 51
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=7.6e-33 Score=286.56 Aligned_cols=322 Identities=17% Similarity=0.220 Sum_probs=231.3
Q ss_pred HHHcCCeEEcCCcEEEEeCCCCEEEeCCC--cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcCC
Q 014997 56 YKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 133 (414)
Q Consensus 56 ~~~~~i~~~~~~~V~~id~~~~~V~~~~g--~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~ 133 (414)
+.+.+|+++.+ .+..+++....+.+.+| +++.||+||||||++|+. |.++|.+.. .. + ...+......+
T Consensus 216 ~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~-p~i~G~~~~-~~---~---~~~~~~~~~~~ 286 (598)
T 2x8g_A 216 LRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATGERPKY-PEIPGAVEY-GI---T---SDDLFSLPYFP 286 (598)
T ss_dssp HHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECC-CSSTTHHHH-CE---E---HHHHTTCSSCC
T ss_pred HhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCC-CCCCCcccc-eE---c---HHHHhhCccCC
Confidence 45678999875 67778876656666677 469999999999999864 444442211 11 1 22232222457
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEec-----CC--
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG-----SD-- 206 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~-----~~-- 206 (414)
++++|||||++|+|+|..|+++|.+||++++. .+++ .+++++.+.+.+.+++.||++++++.++++... ++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~ 364 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLR-GFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNK 364 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTB
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcC-cCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCC
Confidence 89999999999999999999999999999987 5665 488999999999999999999999988888532 11
Q ss_pred -CcE-EEEEeCCCcEEe--cCEEEEccCCcCCChh--hhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCc
Q 014997 207 -GRV-AAVKLEDGSTID--ADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 279 (414)
Q Consensus 207 -~~~-~~v~~~~g~~i~--~D~vi~a~G~~p~~~~--l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~ 279 (414)
+.+ ..+.+.+|++++ +|.||+|+|++|++++ ++.+|++.+ +|+|.||++++|+.|+|||+|||+....
T Consensus 365 ~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~----- 439 (598)
T 2x8g_A 365 PGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKP----- 439 (598)
T ss_dssp CCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSC-----
T ss_pred CceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCC-----
Confidence 333 233456787655 9999999999999987 467888875 5789999999999999999999965321
Q ss_pred ccccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeeccCCCCCCcceeeeEeecCCCc---------EEEE-----
Q 014997 280 TARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIEI----- 343 (414)
Q Consensus 280 ~~~~~~~~~A~~~a~~aa~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~~~~---------~~~~----- 343 (414)
..+..|..+|+.+|.||++... ..|..+|+.+ |... .+..+|....+ ....
T Consensus 440 ----~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~---~~~~------~~a~vGl~e~~a~~~~~~~~~~~~~~~~~ 506 (598)
T 2x8g_A 440 ----QLTPVAIQAGRYLARRLFAGATELTDYSNVATTV---FTPL------EYGACGLSEEDAIEKYGDKDIEVYHSNFK 506 (598)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEE---CSSS------CEEEEECCHHHHHHHHCGGGEEEEEEEEC
T ss_pred ----ccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEE---ECCC------ceEEEeCCHHHHHhhCCCCcEEEEEEecc
Confidence 2566799999999999997543 2355566543 2221 13344533210 1110
Q ss_pred -------cCC-CCcEEEEEEe---CCEEEEEEeecCChHHhhH-HHHHHhCCCCCCh-h-hhcCCCcHHHHHHHHhc
Q 014997 344 -------GNF-DPKIATFWID---SGKLKGVLVESGSPEEFQL-LPTLARSQPFVDK-A-KLQQASSVEEALEIARA 406 (414)
Q Consensus 344 -------~~~-~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~-~~~l~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 406 (414)
+.. ..-+.++.++ +++|+|+++++..+.++.. +..+|+.+.+++. . .+..||++.|++..++.
T Consensus 507 ~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 583 (598)
T 2x8g_A 507 PLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLHV 583 (598)
T ss_dssp CTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCC
T ss_pred chhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCCHHHHHHHHHH
Confidence 001 1236677665 6999999986666766554 4456788888887 2 37899999999988875
No 52
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.98 E-value=5.9e-32 Score=268.91 Aligned_cols=278 Identities=20% Similarity=0.197 Sum_probs=199.6
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
++.+||||+++++++|. |.|+. +..+ ....+++ .....+++++.||+++.+ +|++||+++++|++
T Consensus 26 ~~~~VtlI~~~~~~~~~-p~l~~-v~~g-~~~~~~i-----------~~~~~~~~~~~gv~~i~~-~v~~Id~~~~~V~~ 90 (430)
T 3hyw_A 26 PDLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLLPKFNIEFINE-KAESIDPDANTVTT 90 (430)
T ss_dssp TTCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTGGGGTEEEECS-CEEEEETTTTEEEE
T ss_pred cCCeEEEEcCCCCCccC-ccHHH-HhcC-CCCHHHh-----------hhcHHHHHHHCCcEEEEe-EEEEEECCCCEEEE
Confidence 56799999999998884 77664 5444 2222332 233456677889999985 89999999999999
Q ss_pred CCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc---CCCeEEEECCCh------HHHHHH---
Q 014997 82 NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE---KAKKVVVVGGGY------IGMEVA--- 149 (414)
Q Consensus 82 ~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~---~~~~vvVvGgG~------~g~e~A--- 149 (414)
++|++++||+||||||+++. ++ ++|.. ++.+.+++.+++.++++.+. ..+.++|+|++. .+.|+|
T Consensus 91 ~~g~~i~YD~LViAtG~~~~-~~-i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~ 167 (430)
T 3hyw_A 91 QSGKKIEYDYLVIATGPKLV-FG-AEGQE-ENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALML 167 (430)
T ss_dssp TTCCEEECSEEEECCCCEEE-CC-SBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHH
T ss_pred CCCCEEECCEEEEeCCCCcc-CC-ccCcc-cCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHH
Confidence 99999999999999999753 33 44432 34566778888877765542 345566666553 233443
Q ss_pred -HHHHhCC----CcEEEEeeCCcccc--cccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEE
Q 014997 150 -AAAVGWK----LDTTIIFPENHLLQ--RLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STI 220 (414)
Q Consensus 150 -~~l~~~g----~~Vtlv~~~~~~l~--~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i 220 (414)
..+.+++ .+|++++..+.+.. ....+...+.+++.++++||++++++.|++++.+ + + .+...+| +++
T Consensus 168 ~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~--~-~-~~~~~~g~~~~i 243 (430)
T 3hyw_A 168 HYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPD--K-V-IYEDLNGNTHEV 243 (430)
T ss_dssp HHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSS--E-E-EEECTTSCEEEE
T ss_pred HHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCC--c-e-EEEeeCCCceEe
Confidence 3455555 46888887765532 2245677888999999999999999999999632 2 1 2333333 579
Q ss_pred ecCEEEEccCCcCCChhhhhcCCc--cc-CCCEEEcCCCC-CCCCcEEEEccccccCCccCCc--ccccccHHHHHHHHH
Q 014997 221 DADTIVIGIGAKPTVSPFERVGLN--SS-VGGIQVDGQFR-TRMPGIFAIGDVAAFPLKMYDR--TARVEHVDHARQSAQ 294 (414)
Q Consensus 221 ~~D~vi~a~G~~p~~~~l~~~gl~--~~-~g~i~vd~~~~-t~~~~IyA~GD~a~~~~~~~~~--~~~~~~~~~A~~~a~ 294 (414)
++|++++++|.+|+ +++..+++. .+ +++|.||++|| |++|||||+|||+..+...... .......+.|.+||+
T Consensus 244 ~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~ 322 (430)
T 3hyw_A 244 PAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAM 322 (430)
T ss_dssp ECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHH
T ss_pred ecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHH
Confidence 99999999999998 677766543 33 45699999999 7999999999999987532111 011235667999999
Q ss_pred HHHHHHhc
Q 014997 295 HCIKALLS 302 (414)
Q Consensus 295 ~aa~~i~~ 302 (414)
.+|+||+.
T Consensus 323 ~~A~Ni~~ 330 (430)
T 3hyw_A 323 AVAHNIVN 330 (430)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 53
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=1.9e-31 Score=262.89 Aligned_cols=273 Identities=18% Similarity=0.196 Sum_probs=203.6
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
++.+||||++++++ |..| +++.++.+ ....+++ .++.+++.++||+++.+ +|+.||++++.|++
T Consensus 26 ~~~~Vtlie~~~~~-~~~p-~~~~v~~g-~~~~~~~------------~~~~~~~~~~gv~~i~~-~v~~id~~~~~v~~ 89 (401)
T 3vrd_B 26 PSIEVTLIEPNETY-YTCY-MSNEVIGG-DRELASL------------RVGYDGLRAHGIQVVHD-SALGIDPDKKLVKT 89 (401)
T ss_dssp TTSEEEEECSCSSE-ECST-THHHHHHT-SSCGGGG------------EECSHHHHHTTCEEECS-CEEEEETTTTEEEE
T ss_pred cCCeEEEEeCCCCC-CCcc-CHHHHhcC-CCCHHHH------------hhCHHHHHHCCCEEEEe-EEEEEEccCcEEEe
Confidence 45689999776653 3334 44446555 2233332 35667888999999985 89999999999999
Q ss_pred CCCcEEecCeEEEccCCCCCCCCCCCCCC----CCCEEEecCHHHHHHHHHhhc---CCCeEEEECCC------h----H
Q 014997 82 NSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRDVADADALISSLE---KAKKVVVVGGG------Y----I 144 (414)
Q Consensus 82 ~~g~~~~yd~LviAtG~~~~~~~~~~g~~----~~gv~~~~~~~~~~~~~~~~~---~~~~vvVvGgG------~----~ 144 (414)
.+|+++.||+||||||+++.. +.++|.. ...++.+++.+++..+++.+. .+..+++.+++ . .
T Consensus 90 ~~g~~i~yd~LviAtG~~~~~-~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~ 168 (401)
T 3vrd_B 90 AGGAEFAYDRCVVAPGIDLLY-DKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYER 168 (401)
T ss_dssp TTSCEEECSEEEECCCEEECG-GGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHH
T ss_pred cccceeecceeeeccCCcccc-CCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHH
Confidence 999999999999999998763 4455533 234566677777776655443 44455544332 1 4
Q ss_pred HHHHHHHHHhCC--CcEEEEeeCCcccc-cccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEe
Q 014997 145 GMEVAAAAVGWK--LDTTIIFPENHLLQ-RLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 221 (414)
Q Consensus 145 g~e~A~~l~~~g--~~Vtlv~~~~~~l~-~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~ 221 (414)
++++|..+++.+ .+|++++..+.+.. ..+++.+.+.+.+.+++.||++++++.+..++.+.+.. .+.+++|++++
T Consensus 169 ~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~g~~i~ 246 (401)
T 3vrd_B 169 ASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAM--TVETSFGETFK 246 (401)
T ss_dssp HHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTT--EEEETTSCEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccce--EEEcCCCcEEE
Confidence 556666676655 67999988877632 23566677777777889999999999999887654443 67899999999
Q ss_pred cCEEEEccCCcCCChhhhhcCCcccCCCEEEcCC-CC-CCCCcEEEEcccccc-CCccCCcccccccHHHHHHHHHHHHH
Q 014997 222 ADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FR-TRMPGIFAIGDVAAF-PLKMYDRTARVEHVDHARQSAQHCIK 298 (414)
Q Consensus 222 ~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~-~~-t~~~~IyA~GD~a~~-~~~~~~~~~~~~~~~~A~~~a~~aa~ 298 (414)
+|++++++|.+|+ .+++++++..++|+|.||++ +| |++|||||+|||+.. +.++ ....|..||+.+|+
T Consensus 247 ~D~vi~~~g~~~~-~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk--------~a~~A~~qa~v~A~ 317 (401)
T 3vrd_B 247 AAVINLIPPQRAG-KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPK--------SAYSANSQAKVAAA 317 (401)
T ss_dssp CSEEEECCCEEEC-HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCB--------SHHHHHHHHHHHHH
T ss_pred eeEEEEecCcCCc-hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCCCc--------hHHHHHHHHHHHHH
Confidence 9999999999998 78999999877889999986 65 799999999999864 2222 56679999999999
Q ss_pred HHhc
Q 014997 299 ALLS 302 (414)
Q Consensus 299 ~i~~ 302 (414)
||+.
T Consensus 318 ni~~ 321 (401)
T 3vrd_B 318 AVVA 321 (401)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9974
No 54
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=3.3e-31 Score=264.13 Aligned_cols=282 Identities=17% Similarity=0.152 Sum_probs=206.1
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
+..+||||+++++++|. |.+.. +..+ .....++ .....+++++.||+++. .+|+.++++.+.|++
T Consensus 29 ~g~~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~l~~~~~~~gv~~~~-~~v~~id~~~~~V~~ 93 (437)
T 3sx6_A 29 SGHEVTLISANDYFQFV-PSNPW-VGVG-WKERDDI-----------AFPIRHYVERKGIHFIA-QSAEQIDAEAQNITL 93 (437)
T ss_dssp GGSEEEEECSSSEEECG-GGHHH-HHHT-SSCHHHH-----------EEECHHHHHTTTCEEEC-SCEEEEETTTTEEEE
T ss_pred CcCEEEEEeCCCCCccc-CCccc-cccC-ccCHHHH-----------HHHHHHHHHHCCCEEEE-eEEEEEEcCCCEEEE
Confidence 35689999999988775 54443 3333 1111112 23467788889999986 599999999999999
Q ss_pred CCCcEEecCeEEEccCCCCCCCCCCCCCCC--CCEEEecCHHHHHHHHHhhc---CCCeEEEECCChH----H--HHHH-
Q 014997 82 NSGKLLKYGSLIVATGCTASRFPEKIGGYL--PGVHYIRDVADADALISSLE---KAKKVVVVGGGYI----G--MEVA- 149 (414)
Q Consensus 82 ~~g~~~~yd~LviAtG~~~~~~~~~~g~~~--~gv~~~~~~~~~~~~~~~~~---~~~~vvVvGgG~~----g--~e~A- 149 (414)
++|+++.||+||||||+++.. +.++|.+. ...+.+.+..++..+.+.+. ++++++|||+|.. | +|+|
T Consensus 94 ~~g~~i~~d~lviAtG~~~~~-~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~ 172 (437)
T 3sx6_A 94 ADGNTVHYDYLMIATGPKLAF-ENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAM 172 (437)
T ss_dssp TTSCEEECSEEEECCCCEECG-GGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHH
T ss_pred CCCCEEECCEEEECCCCCcCc-ccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHH
Confidence 999999999999999998863 55667543 25566778888877655332 2456788888554 4 7777
Q ss_pred ---HHHHhCCCc-----EEEEeeCCcccccccC--HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC---
Q 014997 150 ---AAAVGWKLD-----TTIIFPENHLLQRLFT--PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED--- 216 (414)
Q Consensus 150 ---~~l~~~g~~-----Vtlv~~~~~~l~~~~~--~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~--- 216 (414)
..++++|.+ |+++++.+.+....++ ++....+.+.++++||++++++.|++++.+ +........+
T Consensus 173 ~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~--~v~~~~~~~~g~~ 250 (437)
T 3sx6_A 173 IVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDN--KMYVTQVDEKGET 250 (437)
T ss_dssp HHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEETT--EEEEEEECTTSCE
T ss_pred HHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEECC--eEEEEecccCCcc
Confidence 556677865 9999999877432111 357888899999999999999999999742 2111111233
Q ss_pred --CcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCC-CCCcEEEEccccccCCccCCcc---cccccHHHHH
Q 014997 217 --GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRT-RMPGIFAIGDVAAFPLKMYDRT---ARVEHVDHAR 290 (414)
Q Consensus 217 --g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t-~~~~IyA~GD~a~~~~~~~~~~---~~~~~~~~A~ 290 (414)
++++++|.+++++|++|+..+.+.+++..++|+|.||+++|| ++|||||+|||+..+... +.. ....+...|.
T Consensus 251 ~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~-~~~~~~~~pk~~~~A~ 329 (437)
T 3sx6_A 251 IKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVE-TTPVPTGAPKTGYMIE 329 (437)
T ss_dssp EEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSC-CCSSCCCCCCCHHHHH
T ss_pred ccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEeccCCcC-CCcCCCCCCcHHHHHH
Confidence 567999999999999988544444677666788999999998 999999999999876421 111 1123677899
Q ss_pred HHHHHHHHHHhc
Q 014997 291 QSAQHCIKALLS 302 (414)
Q Consensus 291 ~~a~~aa~~i~~ 302 (414)
.||+.+|+||..
T Consensus 330 ~qg~~aA~ni~~ 341 (437)
T 3sx6_A 330 SMVSAAVHNIKA 341 (437)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999985
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.97 E-value=6.2e-30 Score=243.38 Aligned_cols=246 Identities=24% Similarity=0.350 Sum_probs=185.2
Q ss_pred CCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC---
Q 014997 35 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL--- 111 (414)
Q Consensus 35 ~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~--- 111 (414)
.++|+++...+.++..+...++.+.+..+..+..+...+.....+.+.+++++.||+||||||++|+. |++||.+.
T Consensus 51 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~-~~ipG~~~~~~ 129 (312)
T 4gcm_A 51 ENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKK-IGVPGEQELGG 129 (312)
T ss_dssp CCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECC-CCCTTTTTTBT
T ss_pred CCcCCccccchHHHHHHHHHHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCc-CCCCChhhhCC
Confidence 34455555555555555667777888888888788878887788888888899999999999999874 45666542
Q ss_pred CCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcE
Q 014997 112 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 191 (414)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~ 191 (414)
.++++.. .......++|+++|||||++|+|+|..|+++|.+||++++.+++++.. . ...+.+++.++.
T Consensus 130 ~~v~~~~------~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~----~--~~~~~~~~~~~~ 197 (312)
T 4gcm_A 130 RGVSYCA------VCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR----I--LQDRAFKNDKID 197 (312)
T ss_dssp TTEESCH------HHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH----H--HHHHHHHCTTEE
T ss_pred ccEEeee------ccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch----h--HHHHHHHhcCcc
Confidence 2444321 122234568999999999999999999999999999999999877631 1 223556788899
Q ss_pred EEcCceEEEEEecCCCc--EEEEEe--CCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEEc
Q 014997 192 FVKGASIKNLEAGSDGR--VAAVKL--EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIG 267 (414)
Q Consensus 192 i~~~~~v~~i~~~~~~~--~~~v~~--~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~G 267 (414)
......+..+...+... ...... .++..+++|.|++++|.+|+..+++..++..++|+|.||++||||+|+|||+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~G 277 (312)
T 4gcm_A 198 FIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAG 277 (312)
T ss_dssp EECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECS
T ss_pred eeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEe
Confidence 98887776665432111 111112 23357999999999999999999999999888888999999999999999999
Q ss_pred cccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 268 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 268 D~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
||+..+.. .+..|..+|+.||.||..
T Consensus 278 Dv~~~~~~---------~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 278 DVRDKGLR---------QIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp TTBSCSCC---------SHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcch---------HHHHHHHHHHHHHHHHHH
Confidence 99874321 455689999999999863
No 56
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=2.7e-30 Score=255.38 Aligned_cols=267 Identities=19% Similarity=0.223 Sum_probs=207.4
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEeC
Q 014997 3 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN 82 (414)
Q Consensus 3 ~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~ 82 (414)
..+||||++++++.| +|.++. +..+ .....++ .....+++++.+++++.+ +|+.++++.+.|++.
T Consensus 27 g~~V~vie~~~~~~~-~~~~~~-~~~~-~~~~~~~-----------~~~~~~~~~~~gv~~~~~-~v~~i~~~~~~V~~~ 91 (409)
T 3h8l_A 27 KADVKVINKSRFSYF-RPALPH-VAIG-VRDVDEL-----------KVDLSEALPEKGIQFQEG-TVEKIDAKSSMVYYT 91 (409)
T ss_dssp GSEEEEEESSSEEEE-CCSSCC-CCSS-CCCCCCE-----------EEEHHHHTGGGTCEEEEC-EEEEEETTTTEEEEE
T ss_pred CCeEEEEeCCCCcee-ccchhh-cccC-CcCHHHH-----------HHHHHHHHhhCCeEEEEe-eEEEEeCCCCEEEEc
Confidence 468999999988655 477665 3332 2222222 234566777889999987 999999999999998
Q ss_pred CCcE----EecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhcC-CCeEEEECCCh--------------
Q 014997 83 SGKL----LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK-AKKVVVVGGGY-------------- 143 (414)
Q Consensus 83 ~g~~----~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~-~~~vvVvGgG~-------------- 143 (414)
+++. +.||+||+|||+++.. +.++|.+. ..+++.+..++..+.+.+.. .++++|||+|.
T Consensus 92 ~g~~~~~~~~~d~lViAtG~~~~~-~~ipG~~~-~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~ 169 (409)
T 3h8l_A 92 KPDGSMAEEEYDYVIVGIGAHLAT-ELVKGWDK-YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPEN 169 (409)
T ss_dssp CTTSCEEEEECSEEEECCCCEECG-GGSBTHHH-HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTT
T ss_pred cCCcccceeeCCEEEECCCCCcCc-cCCCChhh-cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCcccccccc
Confidence 8764 9999999999998763 44455322 34566677777777665543 26777999992
Q ss_pred -----------HHHHHHH----HHHhCCC----cEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEec
Q 014997 144 -----------IGMEVAA----AAVGWKL----DTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG 204 (414)
Q Consensus 144 -----------~g~e~A~----~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 204 (414)
.++|+|. .+++.|. +|+++++.+ +++ .+++.+.+.+.+.+++.||++++++.|++++.+
T Consensus 170 ~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~-~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~ 247 (409)
T 3h8l_A 170 FVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLS-DLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH 247 (409)
T ss_dssp SSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SST-TBCHHHHHHHHHHHHHHTCEEECSCCEEEECSS
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-ccc-ccCHHHHHHHHHHHHHCCCEEEcCCceEEECCC
Confidence 4777775 4567774 899999988 665 478899999999999999999999999999743
Q ss_pred CCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhc--CCcccCCCEEEcCCCCC-CCCcEEEEccccccCCccCCccc
Q 014997 205 SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV--GLNSSVGGIQVDGQFRT-RMPGIFAIGDVAAFPLKMYDRTA 281 (414)
Q Consensus 205 ~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~--gl~~~~g~i~vd~~~~t-~~~~IyA~GD~a~~~~~~~~~~~ 281 (414)
.+.+++|+++++|.+|+++|++|+ .+++++ ++..++|+|.||+++|| +.|||||+|||+..+.+.
T Consensus 248 ------~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~----- 315 (409)
T 3h8l_A 248 ------EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPK----- 315 (409)
T ss_dssp ------EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSC-----
T ss_pred ------eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhccCCCCc-----
Confidence 478899999999999999999998 678877 55445678999999999 999999999999864332
Q ss_pred ccccHHHHHHHHHHHHHHHhcC
Q 014997 282 RVEHVDHARQSAQHCIKALLSA 303 (414)
Q Consensus 282 ~~~~~~~A~~~a~~aa~~i~~~ 303 (414)
.+..|..||+.+|+||.+.
T Consensus 316 ---~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 316 ---LGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp ---CHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHH
Confidence 5667999999999999864
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=1.3e-30 Score=253.08 Aligned_cols=247 Identities=22% Similarity=0.319 Sum_probs=185.3
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCC---CCCCCCCCC-C-CCC--CEEEe-cCHH
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCT---ASRFPEKIG-G-YLP--GVHYI-RDVA 121 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~---~~~~~~~~g-~-~~~--gv~~~-~~~~ 121 (414)
.+.+++.+++++.+++|+.++.+.. .|.+.+|+++.||+||+|||+. |. .+.++| . ... ++++. ++..
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~-~~~i~g~~~~~~~~~v~~~~~~~~ 159 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPR-KLPQLGNIDHLTGSSVYYAVKSVE 159 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBC-CCGGGCCCTTTBTTTEESSCSCGG
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCC-CCCCCCchhhCcCceEEEecCCHH
Confidence 4556677999999999999997643 7888889889999999999994 43 333445 2 222 34332 2111
Q ss_pred HHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEE
Q 014997 122 DADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 201 (414)
Q Consensus 122 ~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 201 (414)
...+++|+|||+|.+|+|+|..|++.+.+|+++++.+.+.+. +...+.+.+.+++.||++++++.++++
T Consensus 160 --------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~~~~~~l~~~~~~~gv~i~~~~~v~~i 228 (360)
T 3ab1_A 160 --------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH---GKTAHEVERARANGTIDVYLETEVASI 228 (360)
T ss_dssp --------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC---SHHHHSSHHHHHHTSEEEESSEEEEEE
T ss_pred --------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC---HHHHHHHHHHhhcCceEEEcCcCHHHh
Confidence 125799999999999999999999999999999998876642 356667778888999999999999999
Q ss_pred EecCCCcEEEEEeC--CC--cEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccC
Q 014997 202 EAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 277 (414)
Q Consensus 202 ~~~~~~~~~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~ 277 (414)
..+ ++.+..+.+. +| +++++|.||+++|++|+.++++..++..++|+|.||++++|+.|+|||+|||+..+..
T Consensus 229 ~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~-- 305 (360)
T 3ab1_A 229 EES-NGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK-- 305 (360)
T ss_dssp EEE-TTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC--
T ss_pred ccC-CCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc--
Confidence 864 4555456653 77 5799999999999999999999988887778999999999999999999999986532
Q ss_pred CcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeecc
Q 014997 278 DRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVF 319 (414)
Q Consensus 278 ~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~~~~ 319 (414)
...+..|..||..+|++|++.........+++++..+
T Consensus 306 -----~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~~~~ 342 (360)
T 3ab1_A 306 -----LKIIQTGLSEATMAVRHSLSYIKPGEKIRNVFSSVKM 342 (360)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHSCC------------
T ss_pred -----cceeehhHHHHHHHHHHHHhhcCCccccCceeccchh
Confidence 2267789999999999998633222222445555443
No 58
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=7.6e-30 Score=243.07 Aligned_cols=229 Identities=22% Similarity=0.312 Sum_probs=180.9
Q ss_pred CCHhHHHHcCCeEEcCCcEEEEeCCC--CEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC---CCEEEecCHHHHHH
Q 014997 51 QTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADA 125 (414)
Q Consensus 51 ~~~~~~~~~~i~~~~~~~V~~id~~~--~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~ 125 (414)
...+++++.+++++. ++|++++.+. ..|.+++|.++.||+||+|||+.+.. +.+++... +++++.. .
T Consensus 75 ~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~-~~i~g~~~~~~~~~~~~~------~ 146 (323)
T 3f8d_A 75 VFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRK-LGVPGEQEFAGRGISYCS------V 146 (323)
T ss_dssp HHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECC-CCCTTTTTTBTTTEESCH------H
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCcc-CCCCchhhhcCCceEEec------c
Confidence 345667778999999 7999998874 36888888899999999999999764 45566443 5554421 1
Q ss_pred HHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecC
Q 014997 126 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 205 (414)
Q Consensus 126 ~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 205 (414)
.......+++++|||+|.+|+|+|..|++.|.+|+++++.+++++ ++. .+.+.+++.||++++++.++++..+
T Consensus 147 ~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~~- 219 (323)
T 3f8d_A 147 ADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVKKKPNVEFVLNSVVKEIKGD- 219 (323)
T ss_dssp HHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEES-
T ss_pred CCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHHhCCCcEEEeCCEEEEEecc-
Confidence 122345789999999999999999999999999999999987765 222 3334444559999999999999854
Q ss_pred CCcEEEEEeCC---Cc--EEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCc
Q 014997 206 DGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 279 (414)
Q Consensus 206 ~~~~~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~ 279 (414)
+.+..+.+.+ |+ ++++|.||+++|++|+.++++.+++..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 220 -~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----- 293 (323)
T 3f8d_A 220 -KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL----- 293 (323)
T ss_dssp -SSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT-----
T ss_pred -CceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC-----
Confidence 4555666655 76 7999999999999999999999998864 6889999999999999999999998641
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 014997 280 TARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 280 ~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
....+..|..+|+.+|.+|..
T Consensus 294 --~~~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 294 --GFRQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp --TCCCHHHHHHHHHHHHHHHHH
T ss_pred --cccceeehhhHHHHHHHHHHH
Confidence 112677899999999998864
No 59
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=2.1e-30 Score=248.83 Aligned_cols=230 Identities=19% Similarity=0.257 Sum_probs=184.1
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCC--CEEEeCCCcEEecCeEEEccCCC---CCCCCCCCCCC-C--CCEEE-ecCHHHH
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCT---ASRFPEKIGGY-L--PGVHY-IRDVADA 123 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~--~~V~~~~g~~~~yd~LviAtG~~---~~~~~~~~g~~-~--~gv~~-~~~~~~~ 123 (414)
.+.+++.+++++++++|+.++.+. ..|.+++|+++.||+||+|||+. |. .+.++|.+ . .++++ +++..
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~-~~~i~g~~~~~~~~~~~~~~~~~-- 148 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPR-RIGAPGEREFEGRGVYYAVKSKA-- 148 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEEC-CCCCTTTTTTBTTTEESSCSCGG--
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCC-CCCCCChhhccCcEEEEecCchh--
Confidence 455567799999999999998765 35777888889999999999994 44 33344432 1 23432 11111
Q ss_pred HHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEe
Q 014997 124 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 203 (414)
Q Consensus 124 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 203 (414)
...+++++|||+|.+|+|+|..|++.|.+|+++++.+.+++ .++..+.+.+.+++.||++++++.++++..
T Consensus 149 ------~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~ 219 (335)
T 2zbw_A 149 ------EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRRVEG 219 (335)
T ss_dssp ------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEEEEE
T ss_pred ------hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCcceeEcc
Confidence 12579999999999999999999999999999999987754 356777888889999999999999999986
Q ss_pred cCCCcEEEEEeC---CC--cEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCC
Q 014997 204 GSDGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYD 278 (414)
Q Consensus 204 ~~~~~~~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~ 278 (414)
++.+..+.+. +| +++++|.||+++|++|+.++++++++..++|+|.||++++|+.|+|||+|||+..+..
T Consensus 220 --~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~--- 294 (335)
T 2zbw_A 220 --DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPGK--- 294 (335)
T ss_dssp --SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTTC---
T ss_pred --CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCcc---
Confidence 3444456665 67 5799999999999999998999999887778999999999999999999999986532
Q ss_pred cccccccHHHHHHHHHHHHHHHhcC
Q 014997 279 RTARVEHVDHARQSAQHCIKALLSA 303 (414)
Q Consensus 279 ~~~~~~~~~~A~~~a~~aa~~i~~~ 303 (414)
...+..|..+|..+|+||.+.
T Consensus 295 ----~~~~~~A~~~g~~aa~~i~~~ 315 (335)
T 2zbw_A 295 ----LPLIVLGFGEAAIAANHAAAY 315 (335)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHH
T ss_pred ----hhhhhhhHHHHHHHHHHHHHH
Confidence 126778999999999999863
No 60
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=1.4e-30 Score=249.37 Aligned_cols=242 Identities=17% Similarity=0.242 Sum_probs=185.1
Q ss_pred CCCHhHHHHcCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCC---CCCCCCCCCCCCC---CCEEEecCH
Q 014997 50 RQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGC---TASRFPEKIGGYL---PGVHYIRDV 120 (414)
Q Consensus 50 ~~~~~~~~~~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~---~~~~~~~~~g~~~---~gv~~~~~~ 120 (414)
....+++++.+++++++++|+.++++.+ .|.+++|+ +.||+||+|||+ .|. .+.++|.+. .++++ .+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~-~~~~~g~~~~~g~~~~~--~~ 146 (332)
T 3lzw_A 71 NNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR-KLELENAEQYEGKNLHY--FV 146 (332)
T ss_dssp HHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC-CCCCTTGGGGBTTTEES--SC
T ss_pred HHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC-CCCCCChhhccCceEEE--ec
Confidence 3445566678999999999999998876 88888886 999999999999 665 344455432 23433 12
Q ss_pred HHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 121 ADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 121 ~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
.+.. ..++++++|||+|.+|+|+|..|++.+.+|+++++.+++.+ .++ ..+.+++.||++++++.+.+
T Consensus 147 ~~~~-----~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~~~-----~~~~l~~~gv~~~~~~~v~~ 214 (332)
T 3lzw_A 147 DDLQ-----KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--HEH-----SVENLHASKVNVLTPFVPAE 214 (332)
T ss_dssp SCGG-----GGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--CHH-----HHHHHHHSSCEEETTEEEEE
T ss_pred CCHH-----HcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--cHH-----HHHHHhcCCeEEEeCceeeE
Confidence 1111 12579999999999999999999999999999999987653 222 12447889999999999999
Q ss_pred EEecCCCcEEEEEeCC-----CcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCc
Q 014997 201 LEAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLK 275 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~ 275 (414)
+..+++ ...+.+.+ +++++||.||+++|++|+.++++.+++..++|+|.||++++|+.|+|||+|||+..+..
T Consensus 215 i~~~~~--~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~ 292 (332)
T 3lzw_A 215 LIGEDK--IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGK 292 (332)
T ss_dssp EECSSS--CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEECTTC
T ss_pred EecCCc--eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecCCCC
Confidence 986433 33555554 45799999999999999999999999988778999999999999999999999976432
Q ss_pred cCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceee
Q 014997 276 MYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYS 316 (414)
Q Consensus 276 ~~~~~~~~~~~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~ 316 (414)
...+..|..+|+.+|.+|+..........|++++
T Consensus 293 -------~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~s~ 326 (332)
T 3lzw_A 293 -------VNLIASGFGEAPTAVNNAKAYMDPKARVQPLHST 326 (332)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHCTTSCSSCCCHH
T ss_pred -------cceEeeehhhHHHHHHHHHHhhChhhccCCceec
Confidence 2267789999999999997633322233444433
No 61
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.97 E-value=7.9e-29 Score=235.26 Aligned_cols=226 Identities=23% Similarity=0.333 Sum_probs=176.9
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCC-----CCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCC---CCCEEEecCHHHH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADA 123 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~-----~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~ 123 (414)
..+++++.+++++.+++|+.++++ ...|.+++|+++.||+||+|||+++.. |.++|.+ ..++++..
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~-~~~~g~~~~~~~~~~~~~----- 135 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN-MNVPGEDQYRTKGVTYCP----- 135 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESCH-----
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC-CCCCChhhcccceeEEec-----
Confidence 345566789999999899999875 357888889889999999999998764 4455532 13444321
Q ss_pred HHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHh-CCcEEEcCceEEEEE
Q 014997 124 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLE 202 (414)
Q Consensus 124 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~ 202 (414)
.+......+++++|||+|++|+|+|..|++.+.+|+++++.+++. +++ .+.+.+++ .||++++++.++++.
T Consensus 136 -~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~~~l~~~~gv~v~~~~~v~~i~ 207 (310)
T 1fl2_A 136 -HCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQDKLRSLKNVDIILNAQTTEVK 207 (310)
T ss_dssp -HHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH----HHHHHHHTCTTEEEESSEEEEEEE
T ss_pred -cCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH----HHHHHHhhCCCeEEecCCceEEEE
Confidence 222334578999999999999999999999999999999988763 333 34555666 699999999999998
Q ss_pred ecCCCcEEEEEeCC---Cc--EEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCcc
Q 014997 203 AGSDGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 276 (414)
Q Consensus 203 ~~~~~~~~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~ 276 (414)
.+ ++.+..+.+.+ |+ ++++|.||+++|++|+.+++++. +..+ +|+|.||++++|+.|+|||+|||+..+..
T Consensus 208 ~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~- 284 (310)
T 1fl2_A 208 GD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK- 284 (310)
T ss_dssp ES-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSC-
T ss_pred cC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCccCCCCEEEeecccCCcch-
Confidence 54 45555566643 53 69999999999999999888764 6553 57899999999999999999999986532
Q ss_pred CCcccccccHHHHHHHHHHHHHHHhc
Q 014997 277 YDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 277 ~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.+..|..+|+.+|.+|..
T Consensus 285 --------~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 285 --------QIIIATGEGAKASLSAFD 302 (310)
T ss_dssp --------CHHHHHHHHHHHHHHHHH
T ss_pred --------hhhhhHhhHHHHHHHHHH
Confidence 466789999999998874
No 62
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=6.7e-30 Score=240.69 Aligned_cols=217 Identities=22% Similarity=0.182 Sum_probs=172.9
Q ss_pred HhHHHHc-CCeEEcCCcEEEEeCCC--CEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC---CCEEEecCHHHHHHH
Q 014997 53 PEWYKEK-GIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 126 (414)
Q Consensus 53 ~~~~~~~-~i~~~~~~~V~~id~~~--~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~ 126 (414)
.+++.+. +++++. ++|+.++++. ..|.+++|+++.||+||+|||++|+ .|.++|... .++++.. ..
T Consensus 63 ~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~-~~~~~g~~~~~~~~~~~~~------~~ 134 (297)
T 3fbs_A 63 RRQIERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE-LPEIAGLRERWGSAVFHCP------YC 134 (297)
T ss_dssp HHHHTTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE-CCCCBTTGGGBTTTEESCH------HH
T ss_pred HHHHHhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC-CCCCCCchhhcCCeeEEcc------cC
Confidence 3445555 788876 4999998775 4788889989999999999999876 455556432 3444332 11
Q ss_pred HHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCC
Q 014997 127 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 206 (414)
Q Consensus 127 ~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 206 (414)
......+++++|||+|.+|+|+|..|++.| +|+++.+.+.. +.+ .+.+.+++.||+++. +.|+++..+
T Consensus 135 ~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~~----~~~~~l~~~gv~i~~-~~v~~i~~~-- 202 (297)
T 3fbs_A 135 HGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PDA----DQHALLAARGVRVET-TRIREIAGH-- 202 (297)
T ss_dssp HTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CCH----HHHHHHHHTTCEEEC-SCEEEEETT--
T ss_pred cchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CCH----HHHHHHHHCCcEEEc-ceeeeeecC--
Confidence 122346899999999999999999999999 99999987652 232 456778899999996 899999743
Q ss_pred CcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCCcccC---C-CEEEcCCCCCCCCcEEEEccccccCCccCCcccc
Q 014997 207 GRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSV---G-GIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 282 (414)
Q Consensus 207 ~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~---g-~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~ 282 (414)
+ .+.+.+|+++++|.||+++|++|+.+++++++++.+. | ++.||++++|+.|+|||+|||+..+.
T Consensus 203 ~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~-------- 271 (297)
T 3fbs_A 203 A---DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAG-------- 271 (297)
T ss_dssp E---EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTC--------
T ss_pred C---eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchH--------
Confidence 2 6788999999999999999999999999999988653 4 79999999999999999999998632
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 014997 283 VEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 283 ~~~~~~A~~~a~~aa~~i~~ 302 (414)
.+..|..+|+.||.+|..
T Consensus 272 --~~~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 272 --SVALAVGDGAMAGAAAHR 289 (297)
T ss_dssp --CHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhHHHHHHHHHH
Confidence 577799999999998864
No 63
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.96 E-value=7.3e-29 Score=235.63 Aligned_cols=225 Identities=19% Similarity=0.253 Sum_probs=176.4
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCCCCCCCCCCCC---CCCEEEecCHHHHHHHH
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALI 127 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~~ 127 (414)
.+++++.+++++. ++|+.++.+.+ .|.+.+|+++.||+||+|||++++ .|.++|.+ .++++++.+ ..
T Consensus 66 ~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~~~g~~~~~~~~~~~~~~------~~ 137 (311)
T 2q0l_A 66 QEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK-RTGIKGESEYWGKGVSTCAT------CD 137 (311)
T ss_dssp HHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTHHHHBTTTEESCHH------HH
T ss_pred HHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC-CCCCCChhhccCCcEEEeec------CC
Confidence 4556678999998 69999987766 677788888999999999999876 44445532 134554322 12
Q ss_pred HhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHH-hCCcEEEcCceEEEEEecCC
Q 014997 128 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ-QNGVKFVKGASIKNLEAGSD 206 (414)
Q Consensus 128 ~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~-~~gv~i~~~~~v~~i~~~~~ 206 (414)
.....+++++|||+|.+|+|+|..|+++|.+|+++++.+++. .++. +.+.+. +.||++++++.++++..+ +
T Consensus 138 ~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~-~ 209 (311)
T 2q0l_A 138 GFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPI----TLEHAKNNDKIEFLTPYVVEEIKGD-A 209 (311)
T ss_dssp GGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEETTEEEEEEEEE-T
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHH----HHHHHhhCCCeEEEeCCEEEEEECC-C
Confidence 234568999999999999999999999999999999988763 2333 333444 579999999999999854 2
Q ss_pred CcEEEEEeC---CCc--EEecCEEEEccCCcCCChhhhhcC----Cccc-CCCEEEcCCCCCCCCcEEEEccccccCCcc
Q 014997 207 GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVG----LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 276 (414)
Q Consensus 207 ~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~~~g----l~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~ 276 (414)
+.+..+.+. +|+ +++||.||+++|++|++++++..+ +..+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 210 ~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-- 287 (311)
T 2q0l_A 210 SGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP-- 287 (311)
T ss_dssp TEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC--
T ss_pred CcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch--
Confidence 444456664 665 799999999999999999988775 7654 6889999999999999999999998531
Q ss_pred CCcccccccHHHHHHHHHHHHHHHhc
Q 014997 277 YDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 277 ~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
..+..|..||+.+|.||..
T Consensus 288 -------~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 288 -------KQVVCAASDGATAALSVIS 306 (311)
T ss_dssp -------CCHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHhHHHHHHHHHH
Confidence 2577899999999999874
No 64
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.96 E-value=1.5e-29 Score=240.56 Aligned_cols=247 Identities=20% Similarity=0.239 Sum_probs=175.6
Q ss_pred CCCCCCcc-ccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCC--CEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC
Q 014997 35 ARLPGFHT-CVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL 111 (414)
Q Consensus 35 ~~l~~~~~-~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~--~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~ 111 (414)
+++|+++. +++.++..+..+.+++.++++... .|..+.... ..+.+.++.++.||+||||||++|+. |.+||.+.
T Consensus 54 ~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~-~~ipG~~~ 131 (314)
T 4a5l_A 54 ENFPGFPNGIDGNELMMNMRTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKR-MHVPGEDK 131 (314)
T ss_dssp CCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECC-CCCTTHHH
T ss_pred hhccCCcccCCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccc-cCCCcccc
Confidence 44555543 344444455566778889998875 676666544 46778888999999999999999874 45566432
Q ss_pred CCEEEecCHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcE
Q 014997 112 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 191 (414)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~ 191 (414)
...........+.. .....++++++|||+|++|+|+|..|+++|.+||++++.+.+.. .+. ...+.....+++
T Consensus 132 ~~~~~~~~~~~~~~-~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~---~~~~~~~~~~~~ 204 (314)
T 4a5l_A 132 YWQNGVSACAICDG-AVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT---MQERVLNHPKIE 204 (314)
T ss_dssp HBTTTEESCHHHHT-TSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEE
T ss_pred ccccceeeehhhhh-hhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cch---hhhhhhccccee
Confidence 21111111222222 12234689999999999999999999999999999998776543 222 233455677899
Q ss_pred EEcCceEEEEEecCCCcEEEEE-----eCCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEE
Q 014997 192 FVKGASIKNLEAGSDGRVAAVK-----LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAI 266 (414)
Q Consensus 192 i~~~~~v~~i~~~~~~~~~~v~-----~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~ 266 (414)
.+....+.++.... .....+. ..+++++++|.|++++|.+||+++++.. +..+++++.||+++|||+|||||+
T Consensus 205 ~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~-~~~~~~G~iv~~~~~Ts~pgIyA~ 282 (314)
T 4a5l_A 205 VIWNSELVELEGDG-DLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQ-VKTADDGYILTEGPKTSVDGVFAC 282 (314)
T ss_dssp EECSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTS-SCBCTTSCBCCBTTBCSSTTEEEC
T ss_pred eEeeeeeEEEEeee-eccceeEEeecccccceeeccccceEecccccChhHhccc-ceEcCCeeEeCCCCccCCCCEEEE
Confidence 99998888887542 2222333 2445689999999999999999988654 444445666999999999999999
Q ss_pred ccccccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 014997 267 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 301 (414)
Q Consensus 267 GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~ 301 (414)
|||+..+.. ++..|..+|+.||.++.
T Consensus 283 GDv~~~~~~---------~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 283 GDVCDRVYR---------QAIVAAGSGCMAALSCE 308 (314)
T ss_dssp STTTCSSCC---------CHHHHHHHHHHHHHHHH
T ss_pred EeccCCcch---------HHHHHHHHHHHHHHHHH
Confidence 999986542 34568889999988775
No 65
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.96 E-value=2.6e-28 Score=233.47 Aligned_cols=225 Identities=20% Similarity=0.276 Sum_probs=174.9
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCC--C---CEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC---CCEEEecCHHHH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIE--K---QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADA 123 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~--~---~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~ 123 (414)
..+++++.+++++. .+|+.++.+ + ..|.+.+|+++.||+||+|||++++. |.+++.+. .++++...
T Consensus 71 l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~-~~i~g~~~~~~~~~~~~~~---- 144 (325)
T 2q7v_A 71 MHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK-LGIPGEDNFWGKGVSTCAT---- 144 (325)
T ss_dssp HHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESCHH----
T ss_pred HHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC-CCCCChhhccCceEEEecc----
Confidence 34566778999998 589999876 4 47778888899999999999998764 44555431 34544321
Q ss_pred HHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEe
Q 014997 124 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 203 (414)
Q Consensus 124 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 203 (414)
.......+++++|||+|.+|+|+|..|+++|.+|+++++.+.+.. ++.+ ..+.+++.||+++++++++++..
T Consensus 145 --~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~---~~~l~~~~gv~i~~~~~v~~i~~ 216 (325)
T 2q7v_A 145 --CDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVA---QARAFANPKMKFIWDTAVEEIQG 216 (325)
T ss_dssp --HHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEE
T ss_pred --CCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHH---HHHHHhcCCceEecCCceEEEcc
Confidence 122345689999999999999999999999999999999886542 3332 22333446999999999999985
Q ss_pred cCCCcEEEEEeC---CCc--EEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccC
Q 014997 204 GSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 277 (414)
Q Consensus 204 ~~~~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~ 277 (414)
+ +.+..+.+. +|+ +++||.||+|+|++|+.+++++. +..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 217 ~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--- 290 (325)
T 2q7v_A 217 A--DSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY--- 290 (325)
T ss_dssp S--SSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC---
T ss_pred C--CcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCccCCCCEEEeecccCccH---
Confidence 3 445456664 665 79999999999999999988876 6654 6789999999999999999999998631
Q ss_pred CcccccccHHHHHHHHHHHHHHHhc
Q 014997 278 DRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 278 ~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
..+..|..||+.+|.||.+
T Consensus 291 ------~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 291 ------RQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp ------CCHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHH
Confidence 1577899999999999875
No 66
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.96 E-value=4.2e-29 Score=239.56 Aligned_cols=227 Identities=17% Similarity=0.251 Sum_probs=174.7
Q ss_pred CCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe-----CCCcEEecCeEEEccCCCCCCCCCCCCCC---CCCEEEecCHH
Q 014997 50 RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-----NSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVA 121 (414)
Q Consensus 50 ~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~-----~~g~~~~yd~LviAtG~~~~~~~~~~g~~---~~gv~~~~~~~ 121 (414)
....+++++.+++++.++ |+.++++.+.+.+ +++..+.||+||+|||+++. .|.++|.+ ..++++.
T Consensus 88 ~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~-~~~~~g~~~~~~~~~~~~---- 161 (338)
T 3itj_A 88 DRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK-RMHLPGEETYWQKGISAC---- 161 (338)
T ss_dssp HHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC-CCCCTTHHHHBTTTEESC----
T ss_pred HHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC-CCCCCCchhccCccEEEc----
Confidence 344566778899999986 9999988765544 46778999999999999876 34445522 1234332
Q ss_pred HHHHHHHh--hcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhC-CcEEEcCceE
Q 014997 122 DADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN-GVKFVKGASI 198 (414)
Q Consensus 122 ~~~~~~~~--~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~-gv~i~~~~~v 198 (414)
...... ...+++++|||+|.+|+|+|..|+++|.+|+++++.+.++. ...+.+.+.+. ||++++++.+
T Consensus 162 --~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v 232 (338)
T 3itj_A 162 --AVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVA 232 (338)
T ss_dssp --HHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEE
T ss_pred --hhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeeccee
Confidence 122222 34689999999999999999999999999999999987654 22344555554 9999999999
Q ss_pred EEEEecCCCcEEEEEeCC-----CcEEecCEEEEccCCcCCChhhhhcCCccc-CCCEEE-cCCCCCCCCcEEEEccccc
Q 014997 199 KNLEAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQV-DGQFRTRMPGIFAIGDVAA 271 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~v-d~~~~t~~~~IyA~GD~a~ 271 (414)
+++..+ ++.+..+.+.+ +++++||.||+++|++|+..+++. ++..+ +|+|.| |++++|+.|+|||+|||+.
T Consensus 233 ~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~ 310 (338)
T 3itj_A 233 LEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQD 310 (338)
T ss_dssp EEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGC
T ss_pred EEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCC
Confidence 999865 44455666655 467999999999999999888876 77764 677875 7899999999999999997
Q ss_pred cCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 272 FPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 272 ~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.+. ..+..|..+|+.||.+|..
T Consensus 311 ~~~---------~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 311 SKY---------RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp SSC---------CCHHHHHHHHHHHHHHHHH
T ss_pred CCc---------cceeeehhhhHHHHHHHHH
Confidence 432 2567799999999999874
No 67
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.96 E-value=1.8e-28 Score=233.74 Aligned_cols=229 Identities=20% Similarity=0.276 Sum_probs=179.8
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCCCCEEE-eCCCcEEecCeEEEccCCCCCCCCCCCCCC---CCCEEEecCHHHHHHHH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIEKQTLI-TNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALI 127 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~~~~V~-~~~g~~~~yd~LviAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~~ 127 (414)
..+++++.+++++.+ +|+.++.+.+.+. +.++.++.||+||+|||+++.. |.+++.+ ..++++.. ...
T Consensus 68 ~~~~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~-~~~~g~~~~~~~~~~~~~------~~~ 139 (320)
T 1trb_A 68 MHEHATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARY-LGLPSEEAFKGRGVSACA------TSD 139 (320)
T ss_dssp HHHHHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECC-CCCHHHHHTBTTTEESCH------HHH
T ss_pred HHHHHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCC-CCCCChHHhCCceeEecc------cCC
Confidence 345667789999997 5999998765443 5678889999999999998763 4444422 13444332 122
Q ss_pred HhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCC
Q 014997 128 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG 207 (414)
Q Consensus 128 ~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~ 207 (414)
..+..+++++|||+|.+|+|+|..|+++|.+|+++++.+.+. .++.+.+.+.+.+++.||++++++.++++..+ ++
T Consensus 140 ~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~ 215 (320)
T 1trb_A 140 GFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AEKILIKRLMDKVENGNIILHTNRTLEEVTGD-QM 215 (320)
T ss_dssp GGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SS
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CC
Confidence 234578999999999999999999999999999999988764 36677788888899999999999999999864 34
Q ss_pred cEEEEEeCC----C--cEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCC-----CCCCCcEEEEccccccCCcc
Q 014997 208 RVAAVKLED----G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQF-----RTRMPGIFAIGDVAAFPLKM 276 (414)
Q Consensus 208 ~~~~v~~~~----g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~-----~t~~~~IyA~GD~a~~~~~~ 276 (414)
.+..+.+.+ | ++++||.||+|+|++|+.++++ .++..++|+|.||+++ +|+.|+|||+|||+..+..
T Consensus 216 ~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~- 293 (320)
T 1trb_A 216 GVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR- 293 (320)
T ss_dssp SEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSC-
T ss_pred ceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-ccccccCceEEECCCcccccccCCCCCEEEcccccCCcch-
Confidence 555566654 4 5799999999999999988876 4566557889999987 7999999999999986421
Q ss_pred CCcccccccHHHHHHHHHHHHHHHhc
Q 014997 277 YDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 277 ~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.+..|..+|+.||.+|..
T Consensus 294 --------~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 294 --------QAITSAGTGCMAALDAER 311 (320)
T ss_dssp --------CHHHHHHHHHHHHHHHHH
T ss_pred --------hhhhhhccHHHHHHHHHH
Confidence 466788999999998864
No 68
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.96 E-value=3.1e-28 Score=232.25 Aligned_cols=225 Identities=24% Similarity=0.291 Sum_probs=176.5
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC---CCEEEecCHHHHHHH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 126 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~ 126 (414)
..+++++.+++++. .+|+.++.+.+ .|.+ ++.++.||+||+|||+.++. +.+++.+. .++++..+ .
T Consensus 78 ~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~-~~i~g~~~~~~~~~~~~~~------~ 148 (319)
T 3cty_A 78 FADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH-LGVKGESEYFGKGTSYCST------C 148 (319)
T ss_dssp HHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC-CCCBTTTTTBTTTEESCHH------H
T ss_pred HHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc-CCCCChHHhCCceEEEEEe------c
Confidence 34556678999998 68999987665 5666 56679999999999998764 44455321 35554321 1
Q ss_pred HHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCC
Q 014997 127 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 206 (414)
Q Consensus 127 ~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 206 (414)
......+++++|||+|.+|+|+|..|+++|.+|+++++.+.+.. ++. +.+.+++.||++++++.++++..+ +
T Consensus 149 ~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~----l~~~l~~~gv~i~~~~~v~~i~~~-~ 220 (319)
T 3cty_A 149 DGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENA----YVQEIKKRNIPYIMNAQVTEIVGD-G 220 (319)
T ss_dssp HGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHH----HHHHHHHTTCCEECSEEEEEEEES-S
T ss_pred chhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHH----HHHHHhcCCcEEEcCCeEEEEecC-C
Confidence 22245679999999999999999999999999999999876532 333 445567899999999999999864 3
Q ss_pred CcEEEEEeC---CCc--EEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCcc
Q 014997 207 GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 280 (414)
Q Consensus 207 ~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~ 280 (414)
+++..+.+. +|+ +++||.||+|+|++|+.+++++.|+..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 221 ~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~------ 294 (319)
T 3cty_A 221 KKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF------ 294 (319)
T ss_dssp SSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC------
T ss_pred ceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch------
Confidence 445556664 665 6999999999999999999998888764 5889999999999999999999998532
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 014997 281 ARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 281 ~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
..+..|..+|+.||.||..
T Consensus 295 ---~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 295 ---AQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH
T ss_pred ---hhHHHHHHHHHHHHHHHHH
Confidence 1577799999999999874
No 69
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.96 E-value=1.9e-28 Score=232.72 Aligned_cols=227 Identities=22% Similarity=0.238 Sum_probs=173.7
Q ss_pred CCHhHHHHcCCeEEcCCcEEEEeCCC----CEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC---CCEEEecCHHHH
Q 014997 51 QTPEWYKEKGIEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADA 123 (414)
Q Consensus 51 ~~~~~~~~~~i~~~~~~~V~~id~~~----~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~ 123 (414)
...+++++.+++++.+ +|+.+ ++. ..+.+..+.++.||+||+|||+.+. .|.++|... +++++..
T Consensus 67 ~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~-~~~~~g~~~~~~~~~~~~~----- 138 (315)
T 3r9u_A 67 PWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK-KAGFKGEDEFFGKGVSTCA----- 138 (315)
T ss_dssp HHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESCH-----
T ss_pred HHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC-CCCCCChhhcCCCeEEeee-----
Confidence 3455667789999997 89999 443 3421332228999999999999876 455566443 4554432
Q ss_pred HHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEe
Q 014997 124 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 203 (414)
Q Consensus 124 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 203 (414)
........+++++|||+|.+|+|+|..|++++.+|+++++.+++.. ++. .+.+.+++.||++++++.+.++..
T Consensus 139 -~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~ 211 (315)
T 3r9u_A 139 -TCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APS---TVEKVKKNEKIELITSASVDEVYG 211 (315)
T ss_dssp -HHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHH---HHHHHHHCTTEEEECSCEEEEEEE
T ss_pred -cccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHH---HHHHHHhcCCeEEEeCcEEEEEEc
Confidence 2223345789999999999999999999999999999999887632 333 344556789999999999999985
Q ss_pred cCCCcEEEEEeC--CCc--EEecCEEEEccCCcCCChhhhh---cC-Cccc-CCCEEEcCCCCCCCCcEEEEccccccCC
Q 014997 204 GSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSPFER---VG-LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPL 274 (414)
Q Consensus 204 ~~~~~~~~v~~~--~g~--~i~~D~vi~a~G~~p~~~~l~~---~g-l~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~ 274 (414)
+ ++.+..+.+. +|+ ++++|.||+++|++|+..+++. +| +..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 212 ~-~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~ 290 (315)
T 3r9u_A 212 D-KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP 290 (315)
T ss_dssp E-TTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC
T ss_pred C-CCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch
Confidence 4 4455556655 775 7999999999999999888765 54 7764 5889999999999999999999986432
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 275 KMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 275 ~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
..+..|..+|+.||.+|..
T Consensus 291 ---------~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 291 ---------KQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHH
T ss_pred ---------hhhhhHHhhHHHHHHHHHH
Confidence 2577899999999999874
No 70
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=4.9e-29 Score=247.97 Aligned_cols=274 Identities=19% Similarity=0.190 Sum_probs=196.7
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe
Q 014997 2 ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT 81 (414)
Q Consensus 2 ~~g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~ 81 (414)
+..+||||++++++.|. |.+.. +..+ .....++ .....+++++.+++++.+ +|+.++++.+.|.+
T Consensus 26 ~g~~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~~~~~~~~~gv~~~~~-~v~~id~~~~~v~~ 90 (430)
T 3h28_A 26 PDLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLLPKFNIEFINE-KAESIDPDANTVTT 90 (430)
T ss_dssp TTCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTGGGGTEEEECS-CEEEEETTTTEEEE
T ss_pred CCCeEEEECCCCCCCcC-CCcch-hccC-ccCHHHH-----------HHHHHHHHHhcCCEEEEE-EEEEEECCCCEEEE
Confidence 35689999999987774 54443 3222 1122222 233456677889999985 99999999999999
Q ss_pred CCCcEEecCeEEEccCCCCCCCCCCCCCCCC-CEEEecCHHHHHHHHHhh---cCCCeEEEECCChHH------HHHHH-
Q 014997 82 NSGKLLKYGSLIVATGCTASRFPEKIGGYLP-GVHYIRDVADADALISSL---EKAKKVVVVGGGYIG------MEVAA- 150 (414)
Q Consensus 82 ~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~-gv~~~~~~~~~~~~~~~~---~~~~~vvVvGgG~~g------~e~A~- 150 (414)
++|+++.||+||+|||+++. .| +.... ....+.+..++..+.+.+ .++++++|||+|..+ +|+|.
T Consensus 91 ~~g~~i~~d~liiAtG~~~~-~p---g~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~ 166 (430)
T 3h28_A 91 QSGKKIEYDYLVIATGPKLV-FG---AEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALM 166 (430)
T ss_dssp TTCCEEECSEEEECCCCEEE-CC---SBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHH
T ss_pred CCCcEEECCEEEEcCCcccc-cC---CCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHH
Confidence 99999999999999999865 33 21111 123455666666554432 234567888887543 88774
Q ss_pred ---HHHhCC----CcEEEEeeCCccccccc--CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC----C
Q 014997 151 ---AAVGWK----LDTTIIFPENHLLQRLF--TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED----G 217 (414)
Q Consensus 151 ---~l~~~g----~~Vtlv~~~~~~l~~~~--~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~----g 217 (414)
.++++| .+|+++++.+.+....+ .++....+.+.+++.||++++++.|++++.+ .+.+.+ +
T Consensus 167 la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~------~v~~~~~~~~g 240 (430)
T 3h28_A 167 LHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPD------KVIYEDLNGNT 240 (430)
T ss_dssp HHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSS------EEEEECTTSCE
T ss_pred HHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCC------eEEEEecCCCc
Confidence 455677 47999999887632111 1357788889999999999999999999643 244444 6
Q ss_pred cEEecCEEEEccCCcCCChhhhh--cCCcccCC-CEEEcCCCCC-CCCcEEEEccccccCCccCCccc---ccccHHHHH
Q 014997 218 STIDADTIVIGIGAKPTVSPFER--VGLNSSVG-GIQVDGQFRT-RMPGIFAIGDVAAFPLKMYDRTA---RVEHVDHAR 290 (414)
Q Consensus 218 ~~i~~D~vi~a~G~~p~~~~l~~--~gl~~~~g-~i~vd~~~~t-~~~~IyA~GD~a~~~~~~~~~~~---~~~~~~~A~ 290 (414)
+++++|.+++++|++|+ .++.+ +++..++| +|.||+++|| ++|||||+|||+..+... +... ...+...|.
T Consensus 241 ~~i~~D~vv~a~G~~~~-~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~-~~~~~~~~pk~~~~A~ 318 (430)
T 3h28_A 241 HEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE-KTPIPTGVPKTGMMIE 318 (430)
T ss_dssp EEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS-CCSSCCCCCCCHHHHH
T ss_pred eEEeeeEEEECCCCccc-hhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEeeeccCCcc-CCCCCCCCCchHHHHH
Confidence 78999999999999987 45655 57755678 8999999998 999999999999876421 1110 123567799
Q ss_pred HHHHHHHHHHhc
Q 014997 291 QSAQHCIKALLS 302 (414)
Q Consensus 291 ~~a~~aa~~i~~ 302 (414)
.||+.+|+||..
T Consensus 319 ~~g~~aa~ni~~ 330 (430)
T 3h28_A 319 QMAMAVAHNIVN 330 (430)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999975
No 71
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.96 E-value=7.8e-28 Score=230.74 Aligned_cols=226 Identities=19% Similarity=0.260 Sum_probs=171.8
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCC-------CCEEEecCHHH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL-------PGVHYIRDVAD 122 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~-------~gv~~~~~~~~ 122 (414)
..+++++.+++++.++ |+.++.+.+ +|++ +|+++.||+||+|||+++.. |.+++... .++++.
T Consensus 76 l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~-~~~~g~~~~~~~~~~~~~~~~----- 147 (333)
T 1vdc_A 76 FRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR-LSFVGSGEVLGGFWNRGISAC----- 147 (333)
T ss_dssp HHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC-CCCBTCSSSSSCCBTTTEESC-----
T ss_pred HHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC-CCCCCccccccccccCcEEEe-----
Confidence 3456677899999975 999998765 6777 77889999999999998764 44555432 233322
Q ss_pred HHHHHHhh--cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 123 ADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 123 ~~~~~~~~--~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
..+...+ ..+++|+|||+|.+|+|+|..|+++|.+|+++++.+.+.. .+.+ ..+.+++.||++++++.+++
T Consensus 148 -~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~~~~v~~ 220 (333)
T 1vdc_A 148 -AVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIWNSSVVE 220 (333)
T ss_dssp -HHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEE
T ss_pred -ccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEecCCceEE
Confidence 1222222 5689999999999999999999999999999999886542 2222 22445678999999999999
Q ss_pred EEecCCC-cEEEEEeC---CC--cEEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCC-CCCCCCcEEEEcccccc
Q 014997 201 LEAGSDG-RVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAF 272 (414)
Q Consensus 201 i~~~~~~-~~~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~-~~t~~~~IyA~GD~a~~ 272 (414)
+..++++ .+..+.+. +| ++++||.||+++|++|+.++++ .++..+ +|+|.||++ ++|+.|+|||+|||+..
T Consensus 221 i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~ 299 (333)
T 1vdc_A 221 AYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDK 299 (333)
T ss_dssp EEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCS
T ss_pred EeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCC
Confidence 9865321 45455554 45 5799999999999999988876 467654 678999987 68999999999999986
Q ss_pred CCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 273 PLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 273 ~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
+.. .+..|..+|+.||.+|..
T Consensus 300 ~~~---------~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 300 KYR---------QAITAAGTGCMAALDAEH 320 (333)
T ss_dssp SCC---------CHHHHHHHHHHHHHHHHH
T ss_pred Cch---------hHHHHHHhHHHHHHHHHH
Confidence 421 566788999999988874
No 72
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.95 E-value=1.3e-27 Score=232.33 Aligned_cols=232 Identities=17% Similarity=0.184 Sum_probs=173.2
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCC--CEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 131 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~--~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~ 131 (414)
.++++.+++++.+++|++++++. ..|.+.++ ++.||+||+|||+.+. |.+++ ..+.+...+.+. ...
T Consensus 96 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~--p~ip~---~~~~~~~~~~~~-----~~~ 164 (369)
T 3d1c_A 96 VVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF--PKKPF---KYGIHYSEIEDF-----DNF 164 (369)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS--BCCCS---SSCEEGGGCSCG-----GGS
T ss_pred HHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc--cCCCC---CceechhhcCCh-----hhc
Confidence 34567899999999999999763 57777777 5999999999999764 33333 222332211111 112
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc------ccCHHHHHHHHHHHHhCC-cEEEcCceEEEEEec
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLAQRYEQLYQQNG-VKFVKGASIKNLEAG 204 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------~~~~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~ 204 (414)
++++|+|||+|.+|+|+|..|++.|.+|+++++.+.+++. .+++...+.+.+.+++.| |++++++.|.+++..
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~ 244 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFN 244 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEec
Confidence 5789999999999999999999999999999999877642 245677788899999997 999999999999643
Q ss_pred CCCcEEEEEeCCCcEEe-cCEEEEccCCcCCChhhhhcCCcccCCCEEEcCC-CCCCCCcEEEEccccccCCccCCcccc
Q 014997 205 SDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDRTAR 282 (414)
Q Consensus 205 ~~~~~~~v~~~~g~~i~-~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~-~~t~~~~IyA~GD~a~~~~~~~~~~~~ 282 (414)
++ . ..+.+.+|+++. +|.+|+++|++|+.+++.+.++..++|++.||++ ++|+.|+|||+|||+..+....+
T Consensus 245 ~~-~-~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~---- 318 (369)
T 3d1c_A 245 NG-Q-YHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLC---- 318 (369)
T ss_dssp TT-E-EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCC----
T ss_pred CC-c-eEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCeeEE----
Confidence 22 2 357788887665 6999999999999877776566544677999985 67899999999999987654322
Q ss_pred cccHHHHHHHHHHHHHHHhcCC
Q 014997 283 VEHVDHARQSAQHCIKALLSAQ 304 (414)
Q Consensus 283 ~~~~~~A~~~a~~aa~~i~~~~ 304 (414)
.+..+.+||+.+|++|.+..
T Consensus 319 --~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 319 --YIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp --SHHHHGGGHHHHHHHHHHHT
T ss_pred --EEehhhHHHHHHHHHHhccc
Confidence 34467888999999998744
No 73
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.95 E-value=5.7e-27 Score=238.29 Aligned_cols=226 Identities=23% Similarity=0.336 Sum_probs=178.1
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCC-----CCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCC---CCCEEEecCHHHH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADA 123 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~-----~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~ 123 (414)
..++++++|++++.+++|+.++++ ...|.+++|+++.||+||+|||++++. +.++|.. ..++++....
T Consensus 273 l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~-~~ipG~~~~~~~~v~~~~~~--- 348 (521)
T 1hyu_A 273 LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN-MNVPGEDQYRTKGVTYCPHC--- 348 (521)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTTTTTEECCTTC---
T ss_pred HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC-CCCCChhhhcCceEEEeecC---
Confidence 345567789999999999999864 457888899899999999999998764 4455542 2345544321
Q ss_pred HHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHh-CCcEEEcCceEEEEE
Q 014997 124 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLE 202 (414)
Q Consensus 124 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~ 202 (414)
......+++|+|||+|++|+|+|..|++.|.+|+++++.+++.. + ..+.+.+++ .||++++++.++++.
T Consensus 349 ---~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~ 418 (521)
T 1hyu_A 349 ---DGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVK 418 (521)
T ss_dssp ---CGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEE
T ss_pred ---chhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEE
Confidence 12234689999999999999999999999999999999887653 2 245566677 699999999999998
Q ss_pred ecCCCcEEEEEeC---CCc--EEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCcc
Q 014997 203 AGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 276 (414)
Q Consensus 203 ~~~~~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~ 276 (414)
.+ ++++..+.+. +|+ ++++|.|++++|.+||++++++ .+..+ +|+|.||++++|+.|+|||+|||+..+..
T Consensus 419 ~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~- 495 (521)
T 1hyu_A 419 GD-GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYK- 495 (521)
T ss_dssp EC-SSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSC-
T ss_pred cC-CCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCCCCCCEEEeecccCCCcc-
Confidence 54 4555556664 353 6999999999999999998876 36554 67899999999999999999999986532
Q ss_pred CCcccccccHHHHHHHHHHHHHHHhc
Q 014997 277 YDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 277 ~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.+..|..+|..||.++..
T Consensus 496 --------~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 496 --------QIIIATGEGAKASLSAFD 513 (521)
T ss_dssp --------CHHHHHHHHHHHHHHHHH
T ss_pred --------eeeehHHhHHHHHHHHHH
Confidence 466788999999988864
No 74
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.95 E-value=8.6e-28 Score=227.89 Aligned_cols=219 Identities=14% Similarity=0.106 Sum_probs=164.2
Q ss_pred HHHHcC-CeEEcCCcEEEEeCC---CCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCC---CCCEEEecCHHHHHHHH
Q 014997 55 WYKEKG-IEMIYQDPVTSIDIE---KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALI 127 (414)
Q Consensus 55 ~~~~~~-i~~~~~~~V~~id~~---~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~~ 127 (414)
++.+++ +.++. ..+..++.. .++|.+.+|+++.||+||||||++|+. |+++|.+ ..++++. ....
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~-p~i~G~~~~~~~~v~~~------~~~~ 140 (304)
T 4fk1_A 69 EVMKYPSVHYYE-KTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEF-PSIPNVREYYGKSLFSC------PYCD 140 (304)
T ss_dssp HHTTSTTEEEEE-CCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEEC-CSCTTHHHHBTTTEESC------HHHH
T ss_pred HHHhcCCEEEEe-eEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccc-ccccCccccccceeeec------cccc
Confidence 344444 55555 466666533 347889999999999999999999864 5555532 1234332 2223
Q ss_pred HhhcCCCeEEEECCChH-HHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCC
Q 014997 128 SSLEKAKKVVVVGGGYI-GMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 206 (414)
Q Consensus 128 ~~~~~~~~vvVvGgG~~-g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 206 (414)
....++++++|||||.. ++|+|..+++.+.+|+++.+.+.+.. .+.+.+++.|++++.+. +..+.. ++
T Consensus 141 ~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~---------~~~~~l~~~g~~~~~~~-v~~~~~-~~ 209 (304)
T 4fk1_A 141 GWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQ---------TIMDELSNKNIPVITES-IRTLQG-EG 209 (304)
T ss_dssp SGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCH---------HHHHHHHTTTCCEECSC-EEEEES-GG
T ss_pred hhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchh---------hhhhhhhccceeEeeee-EEEeec-CC
Confidence 33446778888888864 67899989999999999988764432 34566888999999865 777764 35
Q ss_pred CcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCCCCCCcEEEEccccccCCccCCccccccc
Q 014997 207 GRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 285 (414)
Q Consensus 207 ~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~ 285 (414)
+.+..+.+++|+++++|.++++.|.+|+..+++++|++.+ +|+|.||+++|||.|||||+|||+..+.. +
T Consensus 210 ~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~---------~ 280 (304)
T 4fk1_A 210 GYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPS---------S 280 (304)
T ss_dssp GCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCC---------C
T ss_pred CeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcch---------H
Confidence 6667899999999999999999988888889999999875 56799999999999999999999975422 4
Q ss_pred HHHHHHHHHHHHHHHh
Q 014997 286 VDHARQSAQHCIKALL 301 (414)
Q Consensus 286 ~~~A~~~a~~aa~~i~ 301 (414)
+..|..+|+.||.+|.
T Consensus 281 ~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 281 LIIAASQGNKAAIAIN 296 (304)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5668889999888775
No 75
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.95 E-value=7.5e-27 Score=224.38 Aligned_cols=225 Identities=18% Similarity=0.304 Sum_probs=169.5
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCCC-CEE-EeCCCcEEecCeEEEccCCCCCCCCCCCCCC---CCCEEEecCHHHHHHH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIEK-QTL-ITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADAL 126 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~~-~~V-~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~ 126 (414)
..+++++.+++++.++ |+.++..+ .+| .+++|+++.||+||+|||+++.. |.++|.. ..++++.. ..
T Consensus 77 l~~~~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~-~~i~g~~~~~~~~~~~~~------~~ 148 (335)
T 2a87_A 77 MREQALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAARY-LQVPGEQELLGRGVSSCA------TC 148 (335)
T ss_dssp HHHHHHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECC-CCCTHHHHTBTTTEESCH------HH
T ss_pred HHHHHHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccC-CCCCchHhccCCceEEee------cc
Confidence 3455677899999975 99998733 467 78888889999999999998763 4444422 13444322 12
Q ss_pred HHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCC
Q 014997 127 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 206 (414)
Q Consensus 127 ~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 206 (414)
...+..+++++|||+|.+|+|+|..|+++|.+|+++++.+++.. .+.+ ..+.+++.||++++++.++++..++
T Consensus 149 ~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~~~~v~~i~~~~- 221 (335)
T 2a87_A 149 DGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLTNHTVVAVDGDT- 221 (335)
T ss_dssp HGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEECSEEEEEEECSS-
T ss_pred chhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEeCceeEEEecCC-
Confidence 22345789999999999999999999999999999999887643 2222 1244577899999999999998542
Q ss_pred CcEEEEEeC---CC--cEEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCC-CCCCCCcEEEEccccccCCccCCc
Q 014997 207 GRVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDR 279 (414)
Q Consensus 207 ~~~~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~-~~t~~~~IyA~GD~a~~~~~~~~~ 279 (414)
.+..+.+. +| ++++||.||+|+|++|++++++ .++..+ +|+|.||++ ++|+.|+|||+|||+..+..
T Consensus 222 -~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~---- 295 (335)
T 2a87_A 222 -TVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYR---- 295 (335)
T ss_dssp -SCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCC----
T ss_pred -cEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHH----
Confidence 22234443 44 5799999999999999988876 466654 688999985 68999999999999985421
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 014997 280 TARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 280 ~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.+..|..+|+.||.++..
T Consensus 296 -----~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 296 -----QAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp -----CHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHhHHHHHHHHHH
Confidence 456688899999888863
No 76
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.94 E-value=1.9e-27 Score=237.93 Aligned_cols=231 Identities=16% Similarity=0.138 Sum_probs=165.4
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHH----HH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADA----LI 127 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~----~~ 127 (414)
..+++++.+|+++.++.| .+.|++++. .+.||+||||||+.+...|.++|.+.+++++.+++..... ..
T Consensus 65 ~~~~~~~~gv~~~~~~~v------~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~ 137 (460)
T 1cjc_A 65 FTQTARSDRCAFYGNVEV------GRDVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENR 137 (460)
T ss_dssp HHHHHTSTTEEEEBSCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGT
T ss_pred HHHHHHhCCcEEEeeeEE------eeEEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCcccc
Confidence 345667789999998665 234555443 4799999999999963346678877888888654422110 00
Q ss_pred Hh--hcCCCeEEEECCChHHHHHHHHHH--------------------hCCC-cEEEEeeCCccc--------------c
Q 014997 128 SS--LEKAKKVVVVGGGYIGMEVAAAAV--------------------GWKL-DTTIIFPENHLL--------------Q 170 (414)
Q Consensus 128 ~~--~~~~~~vvVvGgG~~g~e~A~~l~--------------------~~g~-~Vtlv~~~~~~l--------------~ 170 (414)
.. ...+++++|||+|++|+|+|..|+ +.+. +|+++.|.+.+. +
T Consensus 138 ~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp 217 (460)
T 1cjc_A 138 ELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLP 217 (460)
T ss_dssp TCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCT
T ss_pred ccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCC
Confidence 00 015799999999999999999998 5676 799999987651 1
Q ss_pred c--------cc----------CHH---HHHHHHHHHHh--------------CCcEEEcCceEEEEEecCCC-cEEEEEe
Q 014997 171 R--------LF----------TPS---LAQRYEQLYQQ--------------NGVKFVKGASIKNLEAGSDG-RVAAVKL 214 (414)
Q Consensus 171 ~--------~~----------~~~---~~~~~~~~l~~--------------~gv~i~~~~~v~~i~~~~~~-~~~~v~~ 214 (414)
. .+ ++. ..+.+.+.+++ +||++++++.+.+|..++++ .+..+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~ 297 (460)
T 1cjc_A 218 GTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRL 297 (460)
T ss_dssp TEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEE
T ss_pred CceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEE
Confidence 0 00 110 23344445555 89999999999999865335 5555554
Q ss_pred C---------------CC--cEEecCEEEEccCCcCCChhhhhcCC-ccc-CCCEEEcCCCCCC-CCcEEEEccccccCC
Q 014997 215 E---------------DG--STIDADTIVIGIGAKPTVSPFERVGL-NSS-VGGIQVDGQFRTR-MPGIFAIGDVAAFPL 274 (414)
Q Consensus 215 ~---------------~g--~~i~~D~vi~a~G~~p~~~~l~~~gl-~~~-~g~i~vd~~~~t~-~~~IyA~GD~a~~~~ 274 (414)
. +| ++++||+||+++|++|+. + .|+ +.+ +++|.||+++||+ .|+|||+|||+..+.
T Consensus 298 ~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~ 373 (460)
T 1cjc_A 298 AVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT 373 (460)
T ss_dssp EEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT
T ss_pred EEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC
Confidence 3 34 579999999999999996 3 566 654 5789999999998 799999999997543
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 275 KMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 275 ~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
. .+..|+.+|..+|.+|++
T Consensus 374 ~---------~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 374 G---------VITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp C---------CHHHHHHHHHHHHHHHHH
T ss_pred c---------cHHHHHHHHHHHHHHHHH
Confidence 2 355688889988888875
No 77
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.94 E-value=2.5e-26 Score=250.14 Aligned_cols=242 Identities=18% Similarity=0.225 Sum_probs=176.3
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCC-CCCCCCCCCCCC-CCCEEEecCHHHHHHHHHh-
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGC-TASRFPEKIGGY-LPGVHYIRDVADADALISS- 129 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~-~~~~~~~~~g~~-~~gv~~~~~~~~~~~~~~~- 129 (414)
.+++++.||++++++.+. .+.|++++++.+.||+||||||+ .|+.++.++|.. .+++++..++.........
T Consensus 245 ~~~~~~~gv~~~~~~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~ 319 (1025)
T 1gte_A 245 IELMKDLGVKIICGKSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKA 319 (1025)
T ss_dssp HHHHHTTTCEEEESCCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCB
T ss_pred HHHHHHCCcEEEcccEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhccc
Confidence 467888999999987662 23466666666899999999999 476554334432 4677764432221111100
Q ss_pred ---------hcCCCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCCc-ccccccCHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 130 ---------LEKAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH-LLQRLFTPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 130 ---------~~~~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
...+++|+|||||++|+|+|..++++|. +||++++.++ +++ .+++++ +.+++.||++++++.+
T Consensus 320 ~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~-~~~~e~-----~~~~~~Gv~~~~~~~~ 393 (1025)
T 1gte_A 320 GMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR-AVPEEV-----ELAKEEKCEFLPFLSP 393 (1025)
T ss_dssp TTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC-SCHHHH-----HHHHHTTCEEECSEEE
T ss_pred ccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC-CCHHHH-----HHHHHcCCEEEeCCCc
Confidence 1236799999999999999999999996 8999999884 343 344443 4567889999999999
Q ss_pred EEEEecCCCcEEEEEeC------CC---------cEEecCEEEEccCCcCC-Chhhhh-cCCccc-CCCEEEcC-CCCCC
Q 014997 199 KNLEAGSDGRVAAVKLE------DG---------STIDADTIVIGIGAKPT-VSPFER-VGLNSS-VGGIQVDG-QFRTR 259 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~------~g---------~~i~~D~vi~a~G~~p~-~~~l~~-~gl~~~-~g~i~vd~-~~~t~ 259 (414)
.++..+ ++.+..+++. +| +++++|.||+++|++|+ ..++.+ .|+..+ +|+|.||+ +++|+
T Consensus 394 ~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts 472 (1025)
T 1gte_A 394 RKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTS 472 (1025)
T ss_dssp EEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCS
T ss_pred eEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccC
Confidence 999753 5666555542 22 36999999999999864 556666 488875 67899997 89999
Q ss_pred CCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhc------C-CCCCCCCCCceee
Q 014997 260 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS------A-QTHTYDYLPYFYS 316 (414)
Q Consensus 260 ~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~------~-~~~~~~~~p~~~~ 316 (414)
.|+|||+|||+..+. .+..|..+|+.||++|.+ + ....++.+||||+
T Consensus 473 ~~~VfA~GD~~~~~~----------~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ 526 (1025)
T 1gte_A 473 EPWVFAGGDIVGMAN----------TTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYT 526 (1025)
T ss_dssp STTEEECSGGGCSCC----------CHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCC
T ss_pred CCCEEEeCCCCCCch----------HHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccc
Confidence 999999999997543 345588899999999874 1 2224678999998
No 78
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=2.8e-26 Score=221.31 Aligned_cols=227 Identities=17% Similarity=0.259 Sum_probs=161.9
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCE---EEeCCCcEEecCeEEEccCC--CCCCCCCCCCCC-CCCE-EEecCHHHHHH
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LPGV-HYIRDVADADA 125 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~---V~~~~g~~~~yd~LviAtG~--~~~~~~~~~g~~-~~gv-~~~~~~~~~~~ 125 (414)
.+++++.+++++++++|++++.+++. |++++| ++.||+||+|||. .|. .|.++|.. ..+. .+.....+
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--- 157 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAY-TPEYQGLESFAGIQLHSAHYST--- 157 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBC-CCCCTTGGGCCSEEEEGGGCCC---
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCC-CCCCCCccccCCcEEEeccCCC---
Confidence 34456779999999999999987765 777777 7999999999996 443 34445532 2222 11111111
Q ss_pred HHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC-Cccccccc-CHHHHHHHHHHHH-----------------
Q 014997 126 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHLLQRLF-TPSLAQRYEQLYQ----------------- 186 (414)
Q Consensus 126 ~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~l~~~~-~~~~~~~~~~~l~----------------- 186 (414)
.....+++|+|||+|.+|+|+|..|++.+ +|+++.+. +.+++..+ +..+...+.+.+.
T Consensus 158 --~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (357)
T 4a9w_A 158 --PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGD 234 (357)
T ss_dssp --SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------------C
T ss_pred --hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccC
Confidence 11236799999999999999999999998 69999987 45555432 2333333322222
Q ss_pred -----------hCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCC
Q 014997 187 -----------QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ 255 (414)
Q Consensus 187 -----------~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~ 255 (414)
+.|+ +..+..+.+++.. .+.+.+|++++||.||+++|++|++++++++++..++|+|.||++
T Consensus 235 ~~~~~~~~~~~~~g~-i~~~~~v~~~~~~------~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i~vd~~ 307 (357)
T 4a9w_A 235 IVMVPPVLDARARGV-LAAVPPPARFSPT------GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEVDGS 307 (357)
T ss_dssp BCCCHHHHHHHHTTC-CCEECCCSEEETT------EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCBCBCTT
T ss_pred cccChhHHHHHhcCc-eEEecCcceEeCC------eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCccccCC
Confidence 3444 4445566677633 578999999999999999999999999999999866788999999
Q ss_pred --CCCCCCcEEEEc--cccccCCccCCcccccccHHHHHHHHHHHHHHHhcC
Q 014997 256 --FRTRMPGIFAIG--DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA 303 (414)
Q Consensus 256 --~~t~~~~IyA~G--D~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~ 303 (414)
++|+.|+|||+| ||+..... .+..|..+|+.+|++|...
T Consensus 308 ~l~~t~~~~vya~Gd~d~~~~~~~---------~~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 308 GLRALAVPSVWLLGYGDWNGMASA---------TLIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp SCBBSSCTTEEECSSCGGGSTTCS---------STTTHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCeEEeccccccccchh---------hhhhhHHHHHHHHHHHHHH
Confidence 899999999999 55552211 2334888999999988753
No 79
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.93 E-value=2.8e-26 Score=228.99 Aligned_cols=226 Identities=21% Similarity=0.259 Sum_probs=166.9
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHH--H-
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALI--S- 128 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~--~- 128 (414)
..+++++.||++++++.|. +.|.++++. +.||+||||||+.+.+.+.++|.+.+++++..++....... .
T Consensus 178 ~~~~l~~~gv~~~~~~~v~------~~v~~~~~~-~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~ 250 (456)
T 2vdc_G 178 RVKLLADAGVIYHPNFEVG------RDASLPELR-RKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGD 250 (456)
T ss_dssp HHHHHHHTTCEEETTCCBT------TTBCHHHHH-SSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTT
T ss_pred HHHHHHHCCcEEEeCCEec------cEEEhhHhH-hhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhccc
Confidence 4567888999999987652 234444443 68999999999973334556787788888754332222111 1
Q ss_pred ---------hhcCCCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCCcc-cccccCHHHHHHHHHHHHhCCcEEEcCce
Q 014997 129 ---------SLEKAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHL-LQRLFTPSLAQRYEQLYQQNGVKFVKGAS 197 (414)
Q Consensus 129 ---------~~~~~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~-l~~~~~~~~~~~~~~~l~~~gv~i~~~~~ 197 (414)
....+++|+|||||++|+|+|..+.++|. +|++++|.+++ ++. .+.+ .+.+++.||++++++.
T Consensus 251 ~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~ 324 (456)
T 2vdc_G 251 TVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQRE-----VAHAEEEGVEFIWQAA 324 (456)
T ss_dssp TCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CHHH-----HHHHHHTTCEEECCSS
T ss_pred ccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CHHH-----HHHHHHCCCEEEeCCC
Confidence 01357899999999999999999999997 49999998865 442 2222 2456788999999999
Q ss_pred EEEEEecCCCcEEEEEe---------C---------CC--cEEecCEEEEccCCcCCCh--hhhhcCCccc-CCCEEEcC
Q 014997 198 IKNLEAGSDGRVAAVKL---------E---------DG--STIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDG 254 (414)
Q Consensus 198 v~~i~~~~~~~~~~v~~---------~---------~g--~~i~~D~vi~a~G~~p~~~--~l~~~gl~~~-~g~i~vd~ 254 (414)
++++.. ++++..+.+ . +| +++++|.||+|+|+.|+.. ++++.++..+ +|+|.||+
T Consensus 325 ~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~ 402 (456)
T 2vdc_G 325 PEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDH 402 (456)
T ss_dssp SCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCT
T ss_pred ceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECC
Confidence 988864 333221221 1 23 4799999999999999876 7888888765 68899999
Q ss_pred C-CCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 255 Q-FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 255 ~-~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
+ ++|+.|+|||+|||+..+. .+..|+.+|+.||++|.+
T Consensus 403 ~~~~Ts~~~VfA~GD~~~g~~----------~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 403 RTKMTNMDGVFAAGDIVRGAS----------LVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp TTCBCSSTTEEECGGGGSSCC----------SHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEeccccCCch----------HHHHHHHHHHHHHHHHHH
Confidence 7 9999999999999987543 466799999999998874
No 80
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.92 E-value=7.7e-25 Score=237.00 Aligned_cols=219 Identities=13% Similarity=0.149 Sum_probs=171.2
Q ss_pred hHHHHc-CCeEEcCCcEEEEeCCCCEEEe-----------------CCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEE
Q 014997 54 EWYKEK-GIEMIYQDPVTSIDIEKQTLIT-----------------NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVH 115 (414)
Q Consensus 54 ~~~~~~-~i~~~~~~~V~~id~~~~~V~~-----------------~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~ 115 (414)
+.+.+. +++++.+++|+.++.+++...+ .++.++.||+||||||++++. +.++|.+.++++
T Consensus 189 ~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~-~~ipG~~~~gv~ 267 (965)
T 2gag_A 189 SELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP-IVFENNDRPGIM 267 (965)
T ss_dssp HHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC-CCCBTCCSTTEE
T ss_pred HHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC-CCCCCCCCCCEE
Confidence 344454 9999999999999876532211 112368999999999999864 556888889998
Q ss_pred EecCHHHHHHHHHh--hcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEE
Q 014997 116 YIRDVADADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 193 (414)
Q Consensus 116 ~~~~~~~~~~~~~~--~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~ 193 (414)
+..++.+ +... ..++++++|||+|++|+|+|..|+++|.+|+++++.+++++ . .+.+++.||+++
T Consensus 268 ~~~~~~~---~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~-----~~~l~~~GV~v~ 334 (965)
T 2gag_A 268 LAGAVRS---YLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A-----AAQAVADGVQVI 334 (965)
T ss_dssp EHHHHHH---HHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-----HHHHHHTTCCEE
T ss_pred EhHHHHH---HHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-----HHHHHhCCeEEE
Confidence 7654432 2221 23578999999999999999999999999999999987653 1 456789999999
Q ss_pred cCceEEEEEecCCCcEEEEEeCC-------C--cEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCC-----CC
Q 014997 194 KGASIKNLEAGSDGRVAAVKLED-------G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR-----TR 259 (414)
Q Consensus 194 ~~~~v~~i~~~~~~~~~~v~~~~-------g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~-----t~ 259 (414)
+++.++++..++++.+..|.+.+ | ++++||.|++++|.+|++++++.. +++|.+|++++ |+
T Consensus 335 ~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~-----~g~i~vd~~~~~~v~~ts 409 (965)
T 2gag_A 335 SGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR-----QGKLDWDTTIHAFVPADA 409 (965)
T ss_dssp ETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT-----TCCEEEETTTTEEEECSC
T ss_pred eCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC-----CCcEEEcCcccccccCCC
Confidence 99999999853245555666654 5 679999999999999999887664 36899999887 89
Q ss_pred CCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 260 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 260 ~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.|+|||+|||+..+. ...|..+|+.||.+|++
T Consensus 410 ~p~IyAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 410 VANQHLAGAMTGRLD-----------TASALSTGAATGAAAAT 441 (965)
T ss_dssp CTTEEECGGGGTCCS-----------HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCchh-----------HHHHHHHHHHHHHHHHH
Confidence 999999999997532 23689999999999975
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.92 E-value=2.8e-24 Score=215.54 Aligned_cols=212 Identities=15% Similarity=0.193 Sum_probs=161.5
Q ss_pred hHHHHcCCe--EEcCCcEEEEeCCCC----EEEeCC---C--cEEecCeEEEccC--CCCCCCCCCCCCC-CCC-EEEec
Q 014997 54 EWYKEKGIE--MIYQDPVTSIDIEKQ----TLITNS---G--KLLKYGSLIVATG--CTASRFPEKIGGY-LPG-VHYIR 118 (414)
Q Consensus 54 ~~~~~~~i~--~~~~~~V~~id~~~~----~V~~~~---g--~~~~yd~LviAtG--~~~~~~~~~~g~~-~~g-v~~~~ 118 (414)
+++++.+++ ++++++|+.++.... .|++.+ | .++.||+||+||| +.|+ .|.++|.+ .++ +.+..
T Consensus 109 ~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~-~p~ipG~~~~~g~~~hs~ 187 (464)
T 2xve_A 109 GRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY-VPEFEGFEKFGGRILHAH 187 (464)
T ss_dssp HHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC-CCCCBTTTTCCSEEEEGG
T ss_pred HHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc-cCCCCCcccCCceEEehh
Confidence 344567888 888999999987654 777754 4 5789999999999 7775 45566644 244 33322
Q ss_pred CHHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 119 DVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 119 ~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
++.+. ....+++|+|||+|.+|+|+|..|++.|.+|+++++.+.+++..+ ..||+++ ..|
T Consensus 188 ~~~~~-----~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~~-------------~~~V~~~--~~V 247 (464)
T 2xve_A 188 DFRDA-----LEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYKW-------------PENWDER--PNL 247 (464)
T ss_dssp GCCCG-----GGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCCC-------------CTTEEEC--SCE
T ss_pred hhCCH-----hHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCCC-------------CCceEEc--CCe
Confidence 11111 123689999999999999999999999999999999888765432 2478887 678
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhh-cCCcccCC-CEEEcC---CCCCCCCcEEEEccccccC
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER-VGLNSSVG-GIQVDG---QFRTRMPGIFAIGDVAAFP 273 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~-~gl~~~~g-~i~vd~---~~~t~~~~IyA~GD~a~~~ 273 (414)
++++.+ .|.+.||+++++|.||+|+|++|+.+++.. .++..+++ ++ ++. .++|+.|+|||+|||+...
T Consensus 248 ~~i~~~------~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~~ 320 (464)
T 2xve_A 248 VRVDTE------NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQWY 320 (464)
T ss_dssp EEECSS------EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCSS
T ss_pred EEEeCC------EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecCCCCCEEEEeCccccc
Confidence 888532 578899999999999999999999998875 67776644 44 443 3568999999999987631
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 014997 274 LKMYDRTARVEHVDHARQSAQHCIKALLSAQ 304 (414)
Q Consensus 274 ~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~ 304 (414)
.+..|..||+.+|+++.+..
T Consensus 321 -----------~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 321 -----------SFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp -----------CHHHHHHHHHHHHHHHTTSS
T ss_pred -----------chHHHHHHHHHHHHHHcCCC
Confidence 46679999999999999754
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.92 E-value=4.7e-26 Score=227.54 Aligned_cols=228 Identities=17% Similarity=0.181 Sum_probs=160.4
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCC-CCCCCCCCCCCCCCEEEecCHHHHH----HH
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT-ASRFPEKIGGYLPGVHYIRDVADAD----AL 126 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~-~~~~~~~~g~~~~gv~~~~~~~~~~----~~ 126 (414)
..+++++.+|+++.+.++ .+.|+++++ .+.||+||||||+. ++ .+.++|.+.+++++.+++.... ++
T Consensus 67 ~~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~-~~~ipG~~~~gv~~~~~~~~~~~~~~d~ 138 (456)
T 1lqt_A 67 FEKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDR-MLNIPGEDLPGSIAAVDFVGWYNAHPHF 138 (456)
T ss_dssp HHHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEEC-CCCCTTTTSTTEEEHHHHHHHHTTCGGG
T ss_pred HHHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCC-CCCCCCCCCCCcEEHHHHHhhhhcCccc
Confidence 345667789999987543 244666665 48999999999997 44 4456787778888755432110 00
Q ss_pred HHhh--cCCCeEEEECCChHHHHHHHHHHhC--------------------C-CcEEEEeeCCcccccccC---------
Q 014997 127 ISSL--EKAKKVVVVGGGYIGMEVAAAAVGW--------------------K-LDTTIIFPENHLLQRLFT--------- 174 (414)
Q Consensus 127 ~~~~--~~~~~vvVvGgG~~g~e~A~~l~~~--------------------g-~~Vtlv~~~~~~l~~~~~--------- 174 (414)
...+ ..+++|+|||+|++|+|+|..|++. | .+|+++.|.+.+...+..
T Consensus 139 ~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~l 218 (456)
T 1lqt_A 139 EQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADL 218 (456)
T ss_dssp TTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGC
T ss_pred ccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcC
Confidence 0011 1578999999999999999999874 5 489999998866432111
Q ss_pred ---------HHH------------------HHHHHHHHHh------CCcEEEcCceEEEEEecCCCcEEEEEeC------
Q 014997 175 ---------PSL------------------AQRYEQLYQQ------NGVKFVKGASIKNLEAGSDGRVAAVKLE------ 215 (414)
Q Consensus 175 ---------~~~------------------~~~~~~~l~~------~gv~i~~~~~v~~i~~~~~~~~~~v~~~------ 215 (414)
+++ .+.+.+.+++ +||++++++.+.++..+ +.+..+.+.
T Consensus 219 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~ 296 (456)
T 1lqt_A 219 DGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVS 296 (456)
T ss_dssp TTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEE
T ss_pred CCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecC
Confidence 111 2344444555 79999999999999753 333334443
Q ss_pred ----------CC--cEEecCEEEEccCCcCCChhhhhcCCccc-CCCEEEcCCCC-CCCCcEEEEccccccCCccCCccc
Q 014997 216 ----------DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFR-TRMPGIFAIGDVAAFPLKMYDRTA 281 (414)
Q Consensus 216 ----------~g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~-~g~i~vd~~~~-t~~~~IyA~GD~a~~~~~~~~~~~ 281 (414)
+| ++++||+||+++|++|+. + .+++.+ +++|.+|+++| |+.|+|||+|||+..+..
T Consensus 297 ~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~------ 366 (456)
T 1lqt_A 297 DGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTG------ 366 (456)
T ss_dssp CSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCS------
T ss_pred CCcccccccCCCceEEEEcCEEEEccccccCC-C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCch------
Confidence 34 469999999999999986 3 355554 57899999999 899999999999975432
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 014997 282 RVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 282 ~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.+..|+.+|..+|.+|++
T Consensus 367 ---~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 367 ---VIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp ---CTTHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHHHHHHH
Confidence 123477888888888874
No 83
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.91 E-value=8.4e-25 Score=230.60 Aligned_cols=223 Identities=16% Similarity=0.175 Sum_probs=164.7
Q ss_pred CEEEeCCCcEEecCeEEEccCCCCC-------CCCCCCCCC--CCCEEEecCHHHHHHHHHhhcCCCeEEEEC--CChHH
Q 014997 77 QTLITNSGKLLKYGSLIVATGCTAS-------RFPEKIGGY--LPGVHYIRDVADADALISSLEKAKKVVVVG--GGYIG 145 (414)
Q Consensus 77 ~~V~~~~g~~~~yd~LviAtG~~~~-------~~~~~~g~~--~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG--gG~~g 145 (414)
+.|+++++..+.||+||||||+.++ ..+.++|.+ .+++++. .+. +......+++|+||| ||.+|
T Consensus 468 ~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~---~~~--l~~~~~~gk~VvVIG~GgG~~g 542 (729)
T 1o94_A 468 KPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTP---EQV--MDGKKKIGKRVVILNADTYFMA 542 (729)
T ss_dssp CCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECH---HHH--HHCCSCCCSEEEEEECCCSSHH
T ss_pred eEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEH---HHH--hcCCCCCCCeEEEEcCCCCchH
Confidence 4455666667899999999999842 234456655 4566543 222 222344678999998 99999
Q ss_pred HHHHHHHHhCCCcEEEEeeCCccccc-ccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC-cE----
Q 014997 146 MEVAAAAVGWKLDTTIIFPENHLLQR-LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-ST---- 219 (414)
Q Consensus 146 ~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g-~~---- 219 (414)
+|+|..|+++|.+||++++.+ +++. .++.. ...+.+.+++.||++++++.++++..+ +......+.++ +.
T Consensus 543 ~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~--~v~~~~~~~~~~~~~~~~ 618 (729)
T 1o94_A 543 PSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPG--RMEIYNIWGDGSKRTYRG 618 (729)
T ss_dssp HHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETT--EEEEEETTCSCSCCCCCC
T ss_pred HHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECC--eEEEEEecCCceEEeccc
Confidence 999999999999999999988 6553 23333 456778889999999999999999742 21111112333 33
Q ss_pred --------------EecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCccccccc
Q 014997 220 --------------IDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 285 (414)
Q Consensus 220 --------------i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~ 285 (414)
++||.||+++|.+|+++++++++. .+|++++|+.|+|||+|||+... .
T Consensus 619 ~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~-------~vd~~~~t~~~~VyAiGD~~~~~-----------~ 680 (729)
T 1o94_A 619 PGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA-------RESEWAENDIKGIYLIGDAEAPR-----------L 680 (729)
T ss_dssp TTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH-------TGGGTGGGTCCEEEECGGGTSCC-----------C
T ss_pred ccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh-------hcccccccCCCCeEEEeCccchh-----------h
Confidence 999999999999999988765421 26789999999999999998621 4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccCCCCCCcceeeeEeecC
Q 014997 286 VDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 336 (414)
Q Consensus 286 ~~~A~~~a~~aa~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~G~~ 336 (414)
+..|..+|+.+|.+|.+. ..+..+|| |++++++. +|++|..
T Consensus 681 ~~~A~~~G~~aA~~i~~~--l~~~~~p~-~~~~~~~~-------~~~~~~~ 721 (729)
T 1o94_A 681 IADATFTGHRVAREIEEA--NPQIAIPY-KRETIAWG-------TPHMPGG 721 (729)
T ss_dssp HHHHHHHHHHHHHTTTSS--CTTSCCCC-CCCCCCTT-------CCSSTTC
T ss_pred HHHHHHHHHHHHHHhhhh--cccCCCCe-eeecccCc-------ccccCCC
Confidence 667999999999999853 35677898 88888764 5666643
No 84
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.91 E-value=1.4e-24 Score=219.24 Aligned_cols=234 Identities=14% Similarity=0.132 Sum_probs=173.0
Q ss_pred CcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCCeEEcCCcEEEEeCCCCEEEe--
Q 014997 4 GRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-- 81 (414)
Q Consensus 4 g~I~vi~~e~~~pY~rp~Ls~~~l~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~V~~-- 81 (414)
.+|+||++++++.+.+...+..+. + ++. .+.++..+..+.+ +.+++++++++|.+++.+++.+.+
T Consensus 131 ~~V~vie~~~~~GG~~~~~~~~~~-g----------~~~-~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~ 197 (493)
T 1y56_A 131 LTVALIEERGWLGGDMWLKGIKQE-G----------FNK-DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPV 197 (493)
T ss_dssp CCEEEECTTSSSSCSGGGTCSEET-T----------TTE-EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEE
T ss_pred CCEEEEeCCCCCCCeeeccccccC-C----------CCC-CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEE
Confidence 579999999888777554443221 1 000 0000000111111 458999999999999887764322
Q ss_pred -CCCc--EEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHh--hcCCCeEEEECCChHHHHHHHHHHhCC
Q 014997 82 -NSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWK 156 (414)
Q Consensus 82 -~~g~--~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~--~~~~~~vvVvGgG~~g~e~A~~l~~~g 156 (414)
++++ .+.||+||||||+.++. +.++|.+.+++++.. +...+... ..++++++|+|+|++|+|
T Consensus 198 ~~~~~~~~~~~d~lvlAtGa~~~~-~~~~g~~~~gv~~~~---~~~~~~~~~~~~~~~~vvViGgG~~gle--------- 264 (493)
T 1y56_A 198 VRGDKLIEILAKRVVLATGAIDST-MLFENNDMPGVFRRD---FALEVMNVWEVAPGRKVAVTGSKADEVI--------- 264 (493)
T ss_dssp EETTEEEEEEESCEEECCCEEECC-CCCTTTTSTTEEEHH---HHHHHHHTSCBCSCSEEEEESTTHHHHH---------
T ss_pred ecCCeEEEEECCEEEECCCCCccC-CCCCCCCCCCEEEcH---HHHHHHHhcccCCCCEEEEECCCHHHHH---------
Confidence 4554 68999999999999864 556788888988753 34444433 235799999999999998
Q ss_pred CcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 157 LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 157 ~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
+.+++.||++++++.|+++..+ +.+..+.+.+|+++++|.||+++|.+|+.+
T Consensus 265 --------------------------~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~ 316 (493)
T 1y56_A 265 --------------------------QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRPDIN 316 (493)
T ss_dssp --------------------------HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEECCH
T ss_pred --------------------------HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCcCch
Confidence 4467789999999999999853 334567788999999999999999999999
Q ss_pred hhhhcCCcc---cCCCEE-EcCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhcC
Q 014997 237 PFERVGLNS---SVGGIQ-VDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA 303 (414)
Q Consensus 237 ~l~~~gl~~---~~g~i~-vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~ 303 (414)
+++.+|+.. .+|+|. ||++++ +.|+|||+|||+..+ .+..|..+|+.+|.+|.+.
T Consensus 317 l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~-----------~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 317 PITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK-----------PHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp HHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCCC-----------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCcc-----------CHHHHHHHHHHHHHHHHHH
Confidence 999998865 256677 899999 999999999999742 4667999999999999863
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.90 E-value=1.1e-23 Score=211.19 Aligned_cols=234 Identities=15% Similarity=0.129 Sum_probs=154.8
Q ss_pred HHcCCeEEcCCcEEEEeCC---CC----EEEeCCCc----EEecCeEEEccCCCCCCCCC-CCCCCCC-CEEEecCHHH-
Q 014997 57 KEKGIEMIYQDPVTSIDIE---KQ----TLITNSGK----LLKYGSLIVATGCTASRFPE-KIGGYLP-GVHYIRDVAD- 122 (414)
Q Consensus 57 ~~~~i~~~~~~~V~~id~~---~~----~V~~~~g~----~~~yd~LviAtG~~~~~~~~-~~g~~~~-gv~~~~~~~~- 122 (414)
++.+++++++++|++|+++ ++ .|.+.+|+ ++.||+||+|||+.|. .|. ..+.... .+.+.....+
T Consensus 138 ~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~-~p~~~~~~~~~~~~~~~~~~~~~ 216 (463)
T 3s5w_A 138 SHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPR-IPQVFRALKGDGRVFHHSQYLEH 216 (463)
T ss_dssp TTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEEC-CCGGGGGGTTCTTEEEGGGHHHH
T ss_pred HHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCC-CcchhhhcCCCCcEEECHHHHhh
Confidence 3458999999999999876 44 67777775 8999999999999876 343 2221121 3444332222
Q ss_pred HHHHHHhhcCCCeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCcccccc-------------------cCHHHHHHH
Q 014997 123 ADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQRL-------------------FTPSLAQRY 181 (414)
Q Consensus 123 ~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~~-------------------~~~~~~~~~ 181 (414)
...+.....++++|+|||+|.+|+|+|..|++. +.+|++++|.+.+++.. ++++....+
T Consensus 217 ~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 296 (463)
T 3s5w_A 217 MAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERL 296 (463)
T ss_dssp HCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHH
T ss_pred HHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHH
Confidence 222211122589999999999999999999998 89999999998765421 122222222
Q ss_pred HHHHHh--------------------------CCcEEEcCceEEEEEecCCCcEEEEEeC---CCc--EEecCEEEEccC
Q 014997 182 EQLYQQ--------------------------NGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIG 230 (414)
Q Consensus 182 ~~~l~~--------------------------~gv~i~~~~~v~~i~~~~~~~~~~v~~~---~g~--~i~~D~vi~a~G 230 (414)
.+.+.. .||++++++.|++++.++++ ..+.+. +|+ ++++|.||+|+|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~--~~v~~~~~~~g~~~~~~~D~Vv~AtG 374 (463)
T 3s5w_A 297 LREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG--IELALRDAGSGELSVETYDAVILATG 374 (463)
T ss_dssp HHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE--EEEEEEETTTCCEEEEEESEEEECCC
T ss_pred HHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE--EEEEEEEcCCCCeEEEECCEEEEeeC
Confidence 222222 69999999999999865333 245554 665 499999999999
Q ss_pred CcCC--ChhhhhcCCcccCCCEEEcCCCCCC-----CCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHH
Q 014997 231 AKPT--VSPFERVGLNSSVGGIQVDGQFRTR-----MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 300 (414)
Q Consensus 231 ~~p~--~~~l~~~gl~~~~g~i~vd~~~~t~-----~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i 300 (414)
++|+ .+++....... |++.||+++++. .|+|||+|||.......... .-..|.+++.+++..+
T Consensus 375 ~~p~~~~~~l~~l~~~~--g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~-----l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 375 YERQLHRQLLEPLAEYL--GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTL-----LSVLPVRAEEISGSLY 444 (463)
T ss_dssp EECCC-CTTTGGGGGGB--C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTS-----STTHHHHHHHHHHHHH
T ss_pred CCCCCccchhHHHHHHh--CCcccCcccccccCCCCCCeEEEcCCCcccCCcCccc-----hhHHHHHHHHHHHHHH
Confidence 9999 66776654333 789999999873 46799999998743321111 2223667777665444
No 86
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=4.6e-23 Score=179.96 Aligned_cols=153 Identities=22% Similarity=0.229 Sum_probs=130.6
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc--------cc-----CHHHHHHHHHHHHhCCcEEEcCceEEEE
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--------LF-----TPSLAQRYEQLYQQNGVKFVKGASIKNL 201 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------~~-----~~~~~~~~~~~l~~~gv~i~~~~~v~~i 201 (414)
+++|||||++|+++|..|+++|.+|+++++.+.++.+ .+ ++++.+.+.+.+++.|++++.+ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999998766532 12 4678888999999999999999 99999
Q ss_pred EecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCccc
Q 014997 202 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 281 (414)
Q Consensus 202 ~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~ 281 (414)
+.++++ ..+.+++| ++++|.||+|+|..|+ +++..|++.++|.|.||++++|+.|+|||+|||+..+.+
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~~------ 150 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPT--LPSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVPG------ 150 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCH--HHHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCSC------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCC--ccccCCCCccCceEEeCCCCCcCCCCEEEeecccCcchh------
Confidence 865443 36778888 8999999999999984 567778887766788999999999999999999986532
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 014997 282 RVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 282 ~~~~~~~A~~~a~~aa~~i~~ 302 (414)
++..|..+|+.+|.||.+
T Consensus 151 ---~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 151 ---HAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHhHHHHHHHHHH
Confidence 567799999999999986
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.88 E-value=7.2e-23 Score=214.34 Aligned_cols=200 Identities=19% Similarity=0.214 Sum_probs=151.1
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEE-ecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLL-KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 131 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~-~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~ 131 (414)
.+++++.+|++++++.|+. ..+ .||+||||||++|+. |.++|.+.+++++.. +.+.....
T Consensus 432 ~~~~~~~gv~~~~~~~v~~-------------~~~~~~d~lviAtG~~p~~-~~i~G~~~~~v~~~~-----~~l~~~~~ 492 (671)
T 1ps9_A 432 RRMIEVTGVTLKLNHTVTA-------------DQLQAFDETILASGIVPRT-PPIDGIDHPKVLSYL-----DVLRDKAP 492 (671)
T ss_dssp HHHHHHHTCEEEESCCCCS-------------SSSCCSSEEEECCCEEECC-CCCBTTTSTTEEEHH-----HHHTSCCC
T ss_pred HHHHHHcCCEEEeCcEecH-------------HHhhcCCEEEEccCCCcCC-CCCCCCCCCcEeeHH-----HHhhCCCC
Confidence 4556778999999876531 124 899999999999874 556776666776542 22222234
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCC-------------------------------------cEEEEeeCCcccccccC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKL-------------------------------------DTTIIFPENHLLQRLFT 174 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~-------------------------------------~Vtlv~~~~~~l~~~~~ 174 (414)
.+++|+|||||++|+|+|..|++.|. +|+++++.+..+...++
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~ 572 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLG 572 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSC
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccc
Confidence 68999999999999999999998773 45677776666665677
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCCChhhhhcCCcccCCCEEE
Q 014997 175 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQV 252 (414)
Q Consensus 175 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~v 252 (414)
+.....+.+.+++.||++++++.+++++. ++ + .+. .+| +++++|.||+++|++|++++++.+.
T Consensus 573 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l~---------- 637 (671)
T 1ps9_A 573 KTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQVLAVDNVVICAGQEPNRALAQPLI---------- 637 (671)
T ss_dssp TTTHHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEEEEECCSEEEECCCEEECCTTHHHHH----------
T ss_pred cccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEEEEeCCEEEECCCccccHHHHHHHH----------
Confidence 77778888999999999999999999973 22 1 222 566 5799999999999999988876431
Q ss_pred cCCCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHH
Q 014997 253 DGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 300 (414)
Q Consensus 253 d~~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i 300 (414)
...++||++|||+..... .+..|.+||..+|.||
T Consensus 638 -----~~g~~v~aiGD~~~~~~~---------~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 638 -----DSGKTVHLIGGCDVAMEL---------DARRAIAQGTRLALEI 671 (671)
T ss_dssp -----TTTCCEEECGGGTCCSSC---------CHHHHHHHHHHHHHHC
T ss_pred -----hcCCCEEEECCcCccCch---------hHHHHHHHHHHHHHhC
Confidence 123789999999885431 4678999999999885
No 88
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.88 E-value=6.2e-23 Score=215.39 Aligned_cols=214 Identities=19% Similarity=0.152 Sum_probs=158.9
Q ss_pred HhHHHHc-CCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCCCC-------CCCCCCCCCCCEEEecCHHHHH
Q 014997 53 PEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASR-------FPEKIGGYLPGVHYIRDVADAD 124 (414)
Q Consensus 53 ~~~~~~~-~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~~~-------~~~~~g~~~~gv~~~~~~~~~~ 124 (414)
..++.+. +++++++++|+ .++++++.||+||||||+.++. .|.++|.+.+++++ ..+.
T Consensus 450 ~~~~~~~~gv~~~~~~~v~----------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~---~~~~- 515 (690)
T 3k30_A 450 EAVLAELPNVEIYRESPMT----------GDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLG---PDDL- 515 (690)
T ss_dssp HHHHHTCTTEEEESSCCCC----------HHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEEC---HHHH-
T ss_pred HHHHHHcCCCEEEECCeec----------HHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEc---HHHH-
Confidence 3445565 89998876542 2345568999999999998531 34455655444443 2222
Q ss_pred HHHHhhcCCCeEEEEC--CChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEE
Q 014997 125 ALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLE 202 (414)
Q Consensus 125 ~~~~~~~~~~~vvVvG--gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 202 (414)
+......+++|+||| +|.+|+|+|..|++.|.+|+++++.+.+++...++.....+.+.+++.||+++++++|++++
T Consensus 516 -l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 594 (690)
T 3k30_A 516 -FAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVG 594 (690)
T ss_dssp -HTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred -hCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEE
Confidence 222345678999999 99999999999999999999999999887754456667788899999999999999999997
Q ss_pred ecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcCCCCCCCCcEEEEccccccCCccCCcccc
Q 014997 203 AGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 282 (414)
Q Consensus 203 ~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~ 282 (414)
.+ +..+..+...++++++||.||+|+|++|+..+++.++... . +|+.|+|||+|||+..+
T Consensus 595 ~~-~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~~---~-------~t~~~~VyaiGD~~~~~--------- 654 (690)
T 3k30_A 595 AG-GVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARR---D-------AGEIASVRGIGDAWAPG--------- 654 (690)
T ss_dssp TT-EEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHHH---H-------HTSCSEEEECGGGTSCB---------
T ss_pred CC-eEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhhh---c-------ccCCCCEEEEeCCCchh---------
Confidence 43 1111111123556899999999999999998876643221 1 78999999999999742
Q ss_pred cccHHHHHHHHHHHHHHHhcC
Q 014997 283 VEHVDHARQSAQHCIKALLSA 303 (414)
Q Consensus 283 ~~~~~~A~~~a~~aa~~i~~~ 303 (414)
.+..|..+|+.+|.+|.+.
T Consensus 655 --~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 655 --TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp --CHHHHHHHHHHHHHHTTCC
T ss_pred --hHHHHHHHHHHHHHHHHhh
Confidence 4556999999999999864
No 89
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.87 E-value=3.7e-22 Score=199.29 Aligned_cols=209 Identities=13% Similarity=0.092 Sum_probs=153.5
Q ss_pred HHHcCCeEEcCCcEEEEeCCCC--EEEeCC---Cc---EEecCeEEEccCC--CCCCCCCCCCCC-----CCC-EEEecC
Q 014997 56 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS---GK---LLKYGSLIVATGC--TASRFPEKIGGY-----LPG-VHYIRD 119 (414)
Q Consensus 56 ~~~~~i~~~~~~~V~~id~~~~--~V~~~~---g~---~~~yd~LviAtG~--~~~~~~~~~g~~-----~~g-v~~~~~ 119 (414)
+++.++.++++++|+.++.... .|++.+ |+ ++.||+||+|||+ .|+ .|.++|.+ .++ +.+..+
T Consensus 125 ~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~-~p~i~G~~~~~~~~~g~v~~~~~ 203 (447)
T 2gv8_A 125 AQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPY-IPNIKGLDEYAKAVPGSVLHSSL 203 (447)
T ss_dssp HGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBC-BCCCBTHHHHHHHSTTSEEEGGG
T ss_pred HHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCC-CCCCCChhhhhccCCccEEEecc
Confidence 3445778889999999987654 676665 66 7999999999998 554 44445532 122 444332
Q ss_pred HHHHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCc-EEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 120 VADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLD-TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 120 ~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~-Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
+.+.. ...+++|+|||+|++|+|+|..|++.+.+ |+++++.+.+ +++.||.+ +..|
T Consensus 204 ~~~~~-----~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~----------------l~~~~i~~--~~~v 260 (447)
T 2gv8_A 204 FREPE-----LFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD----------------IQNESLQQ--VPEI 260 (447)
T ss_dssp CCCGG-----GGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS----------------CBCSSEEE--ECCE
T ss_pred cCChh-----hcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc----------------CCCCCeEE--ecCe
Confidence 22211 12689999999999999999999999999 9999998755 34567775 4678
Q ss_pred EEEEecCCCcEEEEEeCCCcE-EecCEEEEccCCcCCChh-----hhhc--CCcccCCCEEEcCCCC---CCCCcEEEEc
Q 014997 199 KNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVSP-----FERV--GLNSSVGGIQVDGQFR---TRMPGIFAIG 267 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~~-----l~~~--gl~~~~g~i~vd~~~~---t~~~~IyA~G 267 (414)
+++..+ ++ .|.+.||+. +++|.||+|+|++|++++ +++. ++.. ++.+.++.+.+ ++.|+||++|
T Consensus 261 ~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~-~~~~~~~~~~~v~~~~~p~l~~~G 335 (447)
T 2gv8_A 261 TKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLID-DGSHVHNVYQHIFYIPDPTLAFVG 335 (447)
T ss_dssp EEEETT-TT---EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCS-SSSSCCSEETTTEETTCTTEEESS
T ss_pred EEEecC-CC---EEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceec-CCCcccccccccccCCCCcEEEEe
Confidence 888632 22 678899976 799999999999999998 6554 3333 24455555555 6899999999
Q ss_pred cccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 014997 268 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 304 (414)
Q Consensus 268 D~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~~~ 304 (414)
|+.... .+..|..||+.+|+++.+..
T Consensus 336 ~~~~~~-----------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 336 LALHVV-----------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp CCBSSC-----------HHHHHHHHHHHHHHHHTTSS
T ss_pred cccccc-----------CchHHHHHHHHHHHHHcCCC
Confidence 997531 46679999999999999743
No 90
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.85 E-value=1.3e-20 Score=191.99 Aligned_cols=227 Identities=16% Similarity=0.211 Sum_probs=155.0
Q ss_pred HhHHHHcCC--eEEcCCcEEEEeCCCC----EEEeCCCcEEecCeEEEccC--CCCCCCCCCCCCC-CCCEEEecCHHHH
Q 014997 53 PEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LPGVHYIRDVADA 123 (414)
Q Consensus 53 ~~~~~~~~i--~~~~~~~V~~id~~~~----~V~~~~g~~~~yd~LviAtG--~~~~~~~~~~g~~-~~gv~~~~~~~~~ 123 (414)
.+.+++.++ +++++++|++++.+.. .|++++|+++.||+||+||| +.|+ .|.++|.+ +.+..... ..
T Consensus 94 ~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~g~~~~~-~~-- 169 (540)
T 3gwf_A 94 EDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN-FPNLPGLDTFEGETIHT-AA-- 169 (540)
T ss_dssp HHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC-CCCCTTGGGCCSEEEEG-GG--
T ss_pred HHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC-CCCCCCccccCCCEEEe-ec--
Confidence 345667888 8999999999987665 88999999999999999999 5665 45566643 33322111 11
Q ss_pred HHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHH------------------
Q 014997 124 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY------------------ 185 (414)
Q Consensus 124 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l------------------ 185 (414)
........+++|+|||+|.+|+|+|..|++.+.+||+++|.+.++...+++++...+.+.+
T Consensus 170 -~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 248 (540)
T 3gwf_A 170 -WPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAF 248 (540)
T ss_dssp -CCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCS
T ss_pred -CCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccc
Confidence 0011224689999999999999999999999999999999987322222222111111111
Q ss_pred --------------------------------------------------------------------------------
Q 014997 186 -------------------------------------------------------------------------------- 185 (414)
Q Consensus 186 -------------------------------------------------------------------------------- 185 (414)
T Consensus 249 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~k 328 (540)
T 3gwf_A 249 GFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAK 328 (540)
T ss_dssp SSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCS
T ss_pred cccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCcc
Confidence
Q ss_pred ------------HhCCcEEEc--CceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEE
Q 014997 186 ------------QQNGVKFVK--GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQ 251 (414)
Q Consensus 186 ------------~~~gv~i~~--~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~ 251 (414)
.+.+|+++. +..|++|+.+ .|.++||+++++|+||+|||++++..++...++... +++.
T Consensus 329 R~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~------gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~-~G~~ 401 (540)
T 3gwf_A 329 RPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK------GVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGR-DGLH 401 (540)
T ss_dssp SCEEESSTGGGGGSTTEEEEETTTSCEEEECSS------EEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECG-GGCB
T ss_pred ccCCCccHHHHhcCCCEEEEeCCCCCccEEecC------eEEcCCCCEEECCEEEECCccCccccCcCcceEECC-CCcC
Confidence 145788885 6789999753 688999999999999999999999766655444322 2333
Q ss_pred EcC----------CCCC-CCCcEEEE-ccccccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 014997 252 VDG----------QFRT-RMPGIFAI-GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 301 (414)
Q Consensus 252 vd~----------~~~t-~~~~IyA~-GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~ 301 (414)
+++ .+.+ +.||+|++ |..+.. +. ....+..|++++++.|.
T Consensus 402 l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~-----~s-----~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 402 INDHWDGQPTSYLGVSTANFPNWFMVLGPNGPF-----TN-----LPPSIETQVEWISDTIG 453 (540)
T ss_dssp HHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBC-----SC-----HHHHHHHHHHHHHHHHH
T ss_pred HHHhhccChhhccccccCCCCceEEEecCCCCC-----cc-----HHHHHHHHHHHHHHHHH
Confidence 332 2232 89999998 876541 11 23346677888777664
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.77 E-value=2e-18 Score=176.00 Aligned_cols=115 Identities=18% Similarity=0.198 Sum_probs=81.4
Q ss_pred HhHHHHcCC--eEEcCCcEEEEeCCCC----EEEeCCCcEEecCeEEEccC--CCCCCCCCCCCCC-CCCE--EEecCHH
Q 014997 53 PEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LPGV--HYIRDVA 121 (414)
Q Consensus 53 ~~~~~~~~i--~~~~~~~V~~id~~~~----~V~~~~g~~~~yd~LviAtG--~~~~~~~~~~g~~-~~gv--~~~~~~~ 121 (414)
.+.+++.++ +++++++|++++.+.. .|++++|+++.||+||+||| +.|. .|.++|.+ +.+. ++.+...
T Consensus 94 ~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~-~p~ipG~~~f~g~~~h~~~~~~ 172 (545)
T 3uox_A 94 NRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR-MPDIKGIDSFKGESFHSSRWPT 172 (545)
T ss_dssp HHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTGGGCCSEEEEGGGCCB
T ss_pred HHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc-CCCCCCccccCCCeEEcccccc
Confidence 344566777 7889999999987654 88999999999999999999 6775 45566643 3332 2211111
Q ss_pred HHHHHH-HhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 122 DADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 122 ~~~~~~-~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
+..... .....+++|+|||+|.+|+|+|..|++.+.+||+++|.+++
T Consensus 173 ~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 173 DAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred cccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 000000 01235799999999999999999999999999999999874
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.77 E-value=4.9e-18 Score=173.22 Aligned_cols=110 Identities=19% Similarity=0.185 Sum_probs=83.9
Q ss_pred HhHHHHcCC--eEEcCCcEEEEeCCCC----EEEeCCCcEEecCeEEEccC--CCCCCCCCCCCCC-CCCE-EEecCHH-
Q 014997 53 PEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LPGV-HYIRDVA- 121 (414)
Q Consensus 53 ~~~~~~~~i--~~~~~~~V~~id~~~~----~V~~~~g~~~~yd~LviAtG--~~~~~~~~~~g~~-~~gv-~~~~~~~- 121 (414)
.+.+++.++ +++++++|++++.+.. .|++++|+++.||+||+||| +.|. .|.++|.+ +.+. ++.....
T Consensus 106 ~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~g~~~~~~~~~~ 184 (549)
T 4ap3_A 106 EHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN-TPAFDGLDRFTGDIVHTARWPH 184 (549)
T ss_dssp HHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC-CCCCTTGGGCCSEEEEGGGCCT
T ss_pred HHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCCCceEEeccccc
Confidence 344567788 7999999999987665 88999999999999999999 6775 45566643 3342 2211100
Q ss_pred HHHHHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 122 DADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 122 ~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
+. ....+++|+|||+|.+|+|+|..|++.+.+||+++|.+.+
T Consensus 185 ~~-----~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 185 DG-----VDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp TC-----CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred cc-----cccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 11 1126899999999999999999999999999999999874
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.73 E-value=2.2e-17 Score=168.56 Aligned_cols=224 Identities=16% Similarity=0.263 Sum_probs=148.1
Q ss_pred HHHcC--CeEEcCCcEEEEeCCC----CEEEeCCCcEEecCeEEEccCC--CCCCCCCCCCCC-CCCE--EEecCHHHHH
Q 014997 56 YKEKG--IEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LPGV--HYIRDVADAD 124 (414)
Q Consensus 56 ~~~~~--i~~~~~~~V~~id~~~----~~V~~~~g~~~~yd~LviAtG~--~~~~~~~~~g~~-~~gv--~~~~~~~~~~ 124 (414)
.++.+ ++++++++|++++.+. ..|++++|+++.||+||+|||. .|. .|.++|.+ +.|. ++.+...+
T Consensus 104 ~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~-~p~i~G~~~f~G~~~hs~~~~~~-- 180 (542)
T 1w4x_A 104 ADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQ-LPNFPGLKDFAGNLYHTGNWPHE-- 180 (542)
T ss_dssp HHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCC-CCCCTTGGGCCSEEEEGGGCCSS--
T ss_pred HHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCCCceEECCCCCCc--
Confidence 34444 6789999999997643 3788889988999999999995 454 45556643 4452 22111000
Q ss_pred HHHHhhcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc-ccc---cCHHHH----------------------
Q 014997 125 ALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-QRL---FTPSLA---------------------- 178 (414)
Q Consensus 125 ~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~---~~~~~~---------------------- 178 (414)
.....+|+|+|||+|.+|+|+|..|++.+.+|+++.|.+.+. ++. +.+...
T Consensus 181 ---~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~ 257 (542)
T 1w4x_A 181 ---PVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTH 257 (542)
T ss_dssp ---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSSSSSC
T ss_pred ---hhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhccccc
Confidence 011358999999999999999999999999999999887652 210 111110
Q ss_pred -------------------------------------------------HHHHHHH------------------------
Q 014997 179 -------------------------------------------------QRYEQLY------------------------ 185 (414)
Q Consensus 179 -------------------------------------------------~~~~~~l------------------------ 185 (414)
+.+.+.+
T Consensus 258 ~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~~~kr 337 (542)
T 1w4x_A 258 RYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKR 337 (542)
T ss_dssp CCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCSSSSC
T ss_pred cCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCccccC
Confidence 0011111
Q ss_pred -----------HhCCcEEE--cCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEE
Q 014997 186 -----------QQNGVKFV--KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQV 252 (414)
Q Consensus 186 -----------~~~gv~i~--~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~v 252 (414)
.+.+|+++ .+..|++++.+ .|.++| +++++|.||+|+|+++++.++...++... +++.+
T Consensus 338 ~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~------gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~g~-~G~~l 409 (542)
T 1w4x_A 338 LILEIDYYEMFNRDNVHLVDTLSAPIETITPR------GVRTSE-REYELDSLVLATGFDALTGALFKIDIRGV-GNVAL 409 (542)
T ss_dssp CEEESSHHHHTTSTTEEEEETTTSCEEEECSS------EEEESS-CEEECSEEEECCCCCCTTHHHHTSEEECG-GGCBH
T ss_pred CCCCccHHHHhCCCCEEEEecCCCCceEEcCC------eEEeCC-eEEecCEEEEcCCccccccCcCceeeECC-CCCCH
Confidence 12356776 35678888643 678888 89999999999999998787776555433 34444
Q ss_pred cCCC----------C-CCCCcEEEE-ccccccCCccCCcccccccH-HHHHHHHHHHHHHHhc
Q 014997 253 DGQF----------R-TRMPGIFAI-GDVAAFPLKMYDRTARVEHV-DHARQSAQHCIKALLS 302 (414)
Q Consensus 253 d~~~----------~-t~~~~IyA~-GD~a~~~~~~~~~~~~~~~~-~~A~~~a~~aa~~i~~ 302 (414)
++.. . .+.||+|++ |+.+.. ...+| ..|..|+++++++|..
T Consensus 410 ~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~---------~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 410 KEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS---------ALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp HHHTTTSCCCBTTTBCTTSTTEEESSCTTSSG---------GGSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCchheecccccCCCCceEEEcCCCCCc---------ccccHHHHHHHHHHHHHHHHHH
Confidence 4322 2 156777776 666421 12345 5688899999998864
No 94
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.67 E-value=1.1e-15 Score=138.63 Aligned_cols=155 Identities=17% Similarity=0.224 Sum_probs=113.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC-----------------cccccccC-------HHHHHHHHHHHHhC-
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN-----------------HLLQRLFT-------PSLAQRYEQLYQQN- 188 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~-----------------~~l~~~~~-------~~~~~~~~~~l~~~- 188 (414)
.+|+|||||++|+++|..|+++|.+|+++++.. .++. .++ ..+...+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~-~~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLE-RAYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHH-HHCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHh-hhccCCCCCHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999999999872 1111 111 25667788888887
Q ss_pred CcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC--------------------Chh---hhhcCCcc
Q 014997 189 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT--------------------VSP---FERVGLNS 245 (414)
Q Consensus 189 gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~--------------------~~~---l~~~gl~~ 245 (414)
|++++ +++|+++..+ ++.+..+.+.+|+++.+|.||+|+|..++ ..+ +++.++..
T Consensus 83 gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~ 160 (232)
T 2cul_A 83 PLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRF 160 (232)
T ss_dssp TEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCE
T ss_pred CcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeE
Confidence 99999 4689999754 45566788888888999999999999443 222 33455544
Q ss_pred cCCC----------------EEEcC-------CCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 246 SVGG----------------IQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 246 ~~g~----------------i~vd~-------~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.++. ..+.. ...|++|+|||+|||+ ... .+..|.+||+.+|.+|+.
T Consensus 161 ~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g----------~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 161 VEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG----------DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC----------CHHHHHHHHHHHHHHHHH
T ss_pred EccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc----------cHHHHHHHHHHHHHHHHh
Confidence 3111 00110 1227999999999999 432 456689999999999974
No 95
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.52 E-value=3.5e-13 Score=136.03 Aligned_cols=211 Identities=17% Similarity=0.226 Sum_probs=126.7
Q ss_pred HHcCCeEEcCCcEEEEeCCC----------CEEEeCCC-----cEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHH
Q 014997 57 KEKGIEMIYQDPVTSIDIEK----------QTLITNSG-----KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVA 121 (414)
Q Consensus 57 ~~~~i~~~~~~~V~~id~~~----------~~V~~~~g-----~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~ 121 (414)
++.+..++++++|+++.+.. .+|++.++ +++.+++||+|||..|. +|...+. .+.+++...+.
T Consensus 156 ~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~-iP~~~~~-~g~v~Hss~y~ 233 (501)
T 4b63_A 156 QQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAK-MPSGLPQ-DPRIIHSSKYC 233 (501)
T ss_dssp HTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEEC-CCTTSCC-CTTEEEGGGHH
T ss_pred HHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCC-CCCCCCC-Ccceeeccccc
Confidence 34567789999999986432 36666543 36899999999998875 4543332 24455544333
Q ss_pred HHH-HHHHhhcCCCeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccccc--------ccCHHHHHH----------
Q 014997 122 DAD-ALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR--------LFTPSLAQR---------- 180 (414)
Q Consensus 122 ~~~-~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~--------~~~~~~~~~---------- 180 (414)
+.. .+......+|+|+|||+|.+|+|++..|++. +.+|+++.|.+.+.+. .+.++..+.
T Consensus 234 ~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~ 313 (501)
T 4b63_A 234 TTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQ 313 (501)
T ss_dssp HHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHH
T ss_pred cchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHH
Confidence 322 2222234789999999999999999999864 6899999998654321 112111111
Q ss_pred ---------------------HHH-----HHH-----hCCcEEEcCceEEEEEecCC-CcE-----------EEEEeCCC
Q 014997 181 ---------------------YEQ-----LYQ-----QNGVKFVKGASIKNLEAGSD-GRV-----------AAVKLEDG 217 (414)
Q Consensus 181 ---------------------~~~-----~l~-----~~gv~i~~~~~v~~i~~~~~-~~~-----------~~v~~~~g 217 (414)
+.+ .+. .....+..+..+..+..... +.+ ..+.+.+|
T Consensus 314 ~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg 393 (501)
T 4b63_A 314 RSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVK 393 (501)
T ss_dssp HHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CC
T ss_pred HHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCC
Confidence 000 010 11235666666666653222 221 13456788
Q ss_pred cEEecCEEEEccCCcCCCh-hhh-hc-CCc-ccCCCEEEcCCCCC--------CCCcEEEEccc
Q 014997 218 STIDADTIVIGIGAKPTVS-PFE-RV-GLN-SSVGGIQVDGQFRT--------RMPGIFAIGDV 269 (414)
Q Consensus 218 ~~i~~D~vi~a~G~~p~~~-~l~-~~-gl~-~~~g~i~vd~~~~t--------~~~~IyA~GD~ 269 (414)
+++++|.||+|||++++.. +|. .. .+. ..+|...|+.+++. ..++||+-|-+
T Consensus 394 ~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 394 ETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp CEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred eEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 9999999999999998863 222 11 122 23467778776543 24679999954
No 96
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.29 E-value=1.2e-11 Score=115.62 Aligned_cols=165 Identities=17% Similarity=0.180 Sum_probs=111.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhC-CCcEEEEeeCCccccc------------------------------------c-cC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQR------------------------------------L-FT 174 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------------~-~~ 174 (414)
..+|+|||+|++|+.+|..|++. |.+|+++++.+.+... . ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 35799999999999999999997 9999999988654210 0 11
Q ss_pred HHHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEeC---------CC-----cEEecCEEEEccCCcCCChh--
Q 014997 175 PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLE---------DG-----STIDADTIVIGIGAKPTVSP-- 237 (414)
Q Consensus 175 ~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~v~~~---------~g-----~~i~~D~vi~a~G~~p~~~~-- 237 (414)
.++...+.+.+.+ .|+++++++.|+++..+ ++.+..+.+. +| .++++|.||+|+|..++...
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 3344455555655 69999999999999754 4555455542 32 57999999999998876431
Q ss_pred ---hhhcC----CcccCCCEEEcC-------CCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 238 ---FERVG----LNSSVGGIQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 238 ---l~~~g----l~~~~g~i~vd~-------~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
+...+ +... .++.++. ..+++.|++|++||++... ++.......|..+..+|..+|.++..
T Consensus 198 ~~~~~~~g~~~~v~~~-~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGM-KALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHHHTTSSSCCCCC-EEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCCCcCCc-CCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 22222 2212 2343332 3456779999999987531 11111112566788999999999875
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.19 E-value=7.5e-13 Score=132.62 Aligned_cols=223 Identities=15% Similarity=0.122 Sum_probs=129.3
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCEE---EeC-CCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHH
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQTL---ITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS 128 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~V---~~~-~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~ 128 (414)
.+.+++.|++++.+++| ++..++..+ .+. ++.++.+|.||+|||+.+..++...+ +...+...+.-+.+.-.
T Consensus 126 ~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~---~~~~tGdgi~~a~~aGa 201 (472)
T 2e5v_A 126 LKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSST---QSTNIGDGMAIAFKAGT 201 (472)
T ss_dssp HHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSS---CTTCSCHHHHHHHHTTC
T ss_pred HHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccC---CCCCchHHHHHHHHcCC
Confidence 34456679999999889 987665543 332 23358899999999998754332111 11111111111111000
Q ss_pred hhcC-----C-CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHH--------HHHHHHHHHHhCCcEEEc
Q 014997 129 SLEK-----A-KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPS--------LAQRYEQLYQQNGVKFVK 194 (414)
Q Consensus 129 ~~~~-----~-~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~--------~~~~~~~~l~~~gv~i~~ 194 (414)
.+.. . ..++++|+| +++++..++..|..+ +..++++++++ +++. ++..+.+.+++.|. +++
T Consensus 202 ~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~l 276 (472)
T 2e5v_A 202 ILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFI 276 (472)
T ss_dssp CEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEE
T ss_pred CEeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEE
Confidence 0111 1 133455766 888888899999877 78888888865 3433 25566666666653 322
Q ss_pred CceEEEEEecCCCcEEEEEeCCCcEEe-cCEEEEccCCcCCChhhhhcCC-cccCCCEEEcCCCCCCCCcEEEEcccccc
Q 014997 195 GASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGL-NSSVGGIQVDGQFRTRMPGIFAIGDVAAF 272 (414)
Q Consensus 195 ~~~v~~i~~~~~~~~~~v~~~~g~~i~-~D~vi~a~G~~p~~~~l~~~gl-~~~~g~i~vd~~~~t~~~~IyA~GD~a~~ 272 (414)
+.. .+ +. + .+.++ .+.++++.|..|+ +++.-.+. ....|+|.||+++||++|+|||+|||+..
T Consensus 277 d~~--~~----~~------~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~ 341 (472)
T 2e5v_A 277 DLS--KI----ED------F--ERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDS 341 (472)
T ss_dssp ECT--TC----TT------H--HHHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEEC
T ss_pred ecc--ch----HH------H--HHHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhccc
Confidence 211 00 00 0 01233 4677888899998 65442211 12358999999999999999999999872
Q ss_pred CCccCCcccccc--cHHHHHHHHHHHHHHHhc
Q 014997 273 PLKMYDRTARVE--HVDHARQSAQHCIKALLS 302 (414)
Q Consensus 273 ~~~~~~~~~~~~--~~~~A~~~a~~aa~~i~~ 302 (414)
.. .|. .+.. .+..+...|+.|++++.+
T Consensus 342 ~~--hg~-~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 342 GL--HGA-NRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp SS--STT-SCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred cc--CCC-CCCCcccHHHHHHHHHHHHHHHHh
Confidence 11 111 0111 234456667777777654
No 98
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.08 E-value=3.1e-11 Score=121.59 Aligned_cols=148 Identities=15% Similarity=0.118 Sum_probs=103.5
Q ss_pred ecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHH---------HHh--hcCCCeEEEECCChHHHHHHHHHHhCC
Q 014997 88 KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL---------ISS--LEKAKKVVVVGGGYIGMEVAAAAVGWK 156 (414)
Q Consensus 88 ~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~---------~~~--~~~~~~vvVvGgG~~g~e~A~~l~~~g 156 (414)
.||+++++||++++. +++.+.+.+++.......+...+ ... .....+|+|||||++|+.+|..|++.|
T Consensus 37 ~~~~l~~~~g~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGG-GLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTC-HHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCC-CcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 578999999999753 33333333444444455554444 111 224578999999999999999999999
Q ss_pred CcEEEEeeCCccccc----cc----------------------------CHHHHHHHHHHHHhCCcEEEcCceEEEEEec
Q 014997 157 LDTTIIFPENHLLQR----LF----------------------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAG 204 (414)
Q Consensus 157 ~~Vtlv~~~~~~l~~----~~----------------------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 204 (414)
.+|+++++.+.+... .. ...+.+.+.+.+++.|+++++++.|+++..+
T Consensus 116 ~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 116 ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECC
T ss_pred CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEe
Confidence 999999987654200 00 0455567777788899999999999999853
Q ss_pred C-CCcEEEEEe--C-CC--cEEecCEEEEccCCcCCCh
Q 014997 205 S-DGRVAAVKL--E-DG--STIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 205 ~-~~~~~~v~~--~-~g--~~i~~D~vi~a~G~~p~~~ 236 (414)
+ ++....|.+ . +| +++.+|.||.|+|..+...
T Consensus 196 ~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 196 PRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred cCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 2 222234555 4 66 4699999999999987653
No 99
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.86 E-value=1.2e-08 Score=103.27 Aligned_cols=112 Identities=15% Similarity=0.300 Sum_probs=87.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-------------------------------------c---
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------------------------------L--- 172 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~--- 172 (414)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+..+ .
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987532000 0
Q ss_pred ---------------------------c----CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEe
Q 014997 173 ---------------------------F----TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 221 (414)
Q Consensus 173 ---------------------------~----~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~ 221 (414)
. ...+.+.+.+.+++.|++++++++|+++..+ ++.+..|.+.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEE
Confidence 0 0345556777788899999999999999864 5567778999999999
Q ss_pred cCEEEEccCCcCCC--hhhhhcCCcc
Q 014997 222 ADTIVIGIGAKPTV--SPFERVGLNS 245 (414)
Q Consensus 222 ~D~vi~a~G~~p~~--~~l~~~gl~~ 245 (414)
||.||+|+|..+.. .++...|+..
T Consensus 266 Ad~VVlA~G~~s~~~~~~l~~~Gi~~ 291 (549)
T 3nlc_A 266 SRHVVLAVGHSARDTFEMLHERGVYM 291 (549)
T ss_dssp CSCEEECCCTTCHHHHHHHHHTTCCC
T ss_pred CCEEEECCCCChhhHHHHHHHcCCCc
Confidence 99999999998852 2355555543
No 100
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.83 E-value=3.3e-08 Score=94.28 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=77.7
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc---------------------c-cC---------HHHHHHHH
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------------------L-FT---------PSLAQRYE 182 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------~-~~---------~~~~~~~~ 182 (414)
.+|+|||+|+.|+.+|..|+++|.+|+++++.+.+... . .+ ..+.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 47999999999999999999999999999988653110 0 00 56778888
Q ss_pred HHHHhCCcEEEcCceEEEEEecCCCcEEE-EEeCCCcEEecCEEEEccCCc
Q 014997 183 QLYQQNGVKFVKGASIKNLEAGSDGRVAA-VKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 183 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~ 232 (414)
+.+++.|++++.+++|+++...+ +. .. |.+++| ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~-~~-~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFG-ER-LRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEET-TE-EEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEECC-Cc-EEEEEeCCC-EEEeCEEEECCCCC
Confidence 88899999999999999998653 33 24 777777 89999999999963
No 101
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.73 E-value=4.3e-08 Score=92.69 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=80.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc------------------cCHHHHHHHHHHHHhCCcEEEcC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------FTPSLAQRYEQLYQQNGVKFVKG 195 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~~~~~~~~~~l~~~gv~i~~~ 195 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...+ ...++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 589999999999999999999999999999976432100 12566777888888889999999
Q ss_pred ceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCC---cCCC
Q 014997 196 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA---KPTV 235 (414)
Q Consensus 196 ~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~---~p~~ 235 (414)
+.|.++...+++. ..+.+.+|+ +.+|.+|+|+|. .|..
T Consensus 88 ~~v~~i~~~~~~~-~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 88 QAVESVEKQADGV-FKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp CCEEEEEECTTSC-EEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred CEEEEEEECCCCc-EEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 9999998654423 357788876 999999999999 6653
No 102
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.71 E-value=3.9e-08 Score=96.88 Aligned_cols=83 Identities=18% Similarity=0.273 Sum_probs=63.5
Q ss_pred HhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccC--------CcCCChhhhhc--CCcccCCCEEEcCC
Q 014997 186 QQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--------AKPTVSPFERV--GLNSSVGGIQVDGQ 255 (414)
Q Consensus 186 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G--------~~p~~~~l~~~--gl~~~~g~i~vd~~ 255 (414)
++.| ++++++.|++|+.++++ + .|.+.+|+++.||.||+|+| +.|+.+..+.. +.......++|+..
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~ 291 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIH 291 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEE
T ss_pred hhCC-ceEeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEE
Confidence 3456 99999999999865444 3 57888888899999999999 88887653322 11122346999999
Q ss_pred CCCCCCcEEEEccccc
Q 014997 256 FRTRMPGIFAIGDVAA 271 (414)
Q Consensus 256 ~~t~~~~IyA~GD~a~ 271 (414)
++|+.++||+.||+..
T Consensus 292 ~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 292 VRGAEAGIECVGDGIF 307 (431)
T ss_dssp EESCCTTEEEEBSSSS
T ss_pred ECCCCcCceEcCCCCE
Confidence 9999999999999843
No 103
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.71 E-value=7.7e-08 Score=94.50 Aligned_cols=100 Identities=23% Similarity=0.309 Sum_probs=78.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc---------------------------------------
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL--------------------------------------- 172 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 172 (414)
...+|+|||||..|+.+|..|++.|.+|+++++.+.+....
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 34689999999999999999999999999999876431100
Q ss_pred ------------------------cCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEc
Q 014997 173 ------------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 228 (414)
Q Consensus 173 ------------------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 228 (414)
-...+.+.+.+.+++.|++++++++|+++..++++ ..|.+.+| ++.||.||+|
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlA 182 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVA 182 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEEC
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEEC
Confidence 01245566777788889999999999999865333 46778887 8999999999
Q ss_pred cCCcCC
Q 014997 229 IGAKPT 234 (414)
Q Consensus 229 ~G~~p~ 234 (414)
+|..+.
T Consensus 183 tG~~S~ 188 (417)
T 3v76_A 183 SGGKSI 188 (417)
T ss_dssp CCCSSC
T ss_pred CCCccC
Confidence 998763
No 104
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.69 E-value=2.8e-08 Score=96.63 Aligned_cols=101 Identities=24% Similarity=0.408 Sum_probs=77.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc-c-ccC---------HHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-R-LFT---------PSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~-~~~---------~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
+.-+|+|||||+.|+.+|..|...+.+|+++++.+.+.- + .++ +++.....+.+++.||+++++++|++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 456899999999999999999888899999998875421 1 011 11112234567889999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
++... + .|.+++|+++.+|.+|+|||.+|...
T Consensus 88 id~~~--~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 88 IDPNN--K--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EETTT--T--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EECCC--C--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 98542 2 67889999999999999999988643
No 105
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.69 E-value=6.8e-08 Score=91.52 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=78.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC----cc------------ccc----ccCHHHHHHHHHHHHhCCcE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN----HL------------LQR----LFTPSLAQRYEQLYQQNGVK 191 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~----~~------------l~~----~~~~~~~~~~~~~l~~~gv~ 191 (414)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ ++. ...+++...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35789999999999999999999999999999843 11 001 11246777888889999999
Q ss_pred EEcCceEEEEEecCCCcEEEEEe---CCCcEEecCEEEEccCCcCCC
Q 014997 192 FVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 192 i~~~~~v~~i~~~~~~~~~~v~~---~~g~~i~~D~vi~a~G~~p~~ 235 (414)
++.++ +.++.... +.+ .+.+ .++..+.+|.+|+|+|..|..
T Consensus 101 i~~~~-v~~i~~~~-~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 101 IITET-VSKVDLSS-KPF-KLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp EECSC-EEEEECSS-SSE-EEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred EEEeE-EEEEEEcC-CEE-EEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 99998 88997543 332 4555 466789999999999998764
No 106
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.68 E-value=3.1e-08 Score=98.06 Aligned_cols=100 Identities=22% Similarity=0.337 Sum_probs=77.2
Q ss_pred CeEEEECCChHHHHHHHHHHh---CCCcEEEEeeCCcccccc---------c-CHHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL---------F-TPSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~---~g~~Vtlv~~~~~~l~~~---------~-~~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.... . ..++...+.+.+++.||+++. ..++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 799999999987642110 1 112223356677889999986 58899
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhh
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 238 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l 238 (414)
++.+. . .|.+++|+++.+|.+|+|+|.+|+...+
T Consensus 84 id~~~--~--~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDAEA--Q--NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EETTT--T--EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEcCC--C--EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 97542 2 5788899899999999999999875433
No 107
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.68 E-value=1.6e-07 Score=90.07 Aligned_cols=99 Identities=15% Similarity=0.196 Sum_probs=79.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc------------------ccCHHHHHHHHHHHHhCCcEEEc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVK 194 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~~~~~~~~~l~~~gv~i~~ 194 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++.+.+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 468999999999999999999999999999987643100 01246667777888888999999
Q ss_pred CceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 195 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 195 ~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
++.|+.+...+++. ..|.+.+|+++.+|.+|+|+|..
T Consensus 94 ~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCC
Confidence 99999998654433 36778888899999999999984
No 108
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.67 E-value=3.2e-07 Score=93.26 Aligned_cols=103 Identities=16% Similarity=0.196 Sum_probs=82.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc--------------------c----------------cCHH
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--------------------L----------------FTPS 176 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~----------------~~~~ 176 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... . -.++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 358999999999999999999999999999986532100 0 1145
Q ss_pred HHHHHHHHHHhCCc--EEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccC--CcCCC
Q 014997 177 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTV 235 (414)
Q Consensus 177 ~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G--~~p~~ 235 (414)
+.+.+.+..++.|+ +++++++|++++.+++.....|.+.+|+++.||.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 67778888888898 8999999999986655555678899999999999999999 55553
No 109
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.67 E-value=1.3e-07 Score=89.71 Aligned_cols=98 Identities=17% Similarity=0.228 Sum_probs=78.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc------------------cccCHHHHHHHHHHHHhCCcEEEc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------RLFTPSLAQRYEQLYQQNGVKFVK 194 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~~~~~~~~~~~~~~l~~~gv~i~~ 194 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .....++...+.+.+++.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSL 84 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 35799999999999999999999999999998764311 001245666677777888999999
Q ss_pred CceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 195 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 195 ~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
+++|..++..++ ...+.+.+|+++.+|.+|+|+|..
T Consensus 85 ~~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 85 GERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp SCCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 999999986533 335778888889999999999984
No 110
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.66 E-value=1.2e-07 Score=89.13 Aligned_cols=100 Identities=20% Similarity=0.293 Sum_probs=78.7
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeC--Cccc--------cc---ccCHHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE--NHLL--------QR---LFTPSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~--~~~l--------~~---~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+. +. ....++...+.+.+++.|++++. ..|.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999985 1110 11 11246777778888889999999 88999
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
+..+++. ..+.+.+|.++.+|.+|+|+|..|...
T Consensus 95 i~~~~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRGDE--FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC--C--EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecCCE--EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9764332 357788888999999999999987643
No 111
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.66 E-value=2e-07 Score=90.23 Aligned_cols=97 Identities=22% Similarity=0.254 Sum_probs=79.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------------
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 171 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 171 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987644210
Q ss_pred --ccC-----------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 172 --LFT-----------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 --~~~-----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
.++ ..+.+.+.+.+++.|++++.+++|++++. ++ .|.+.+|+++.+|.||.|.|..+.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHH
Confidence 000 34466677778888999999999999985 44 577888989999999999998764
No 112
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.64 E-value=1.7e-07 Score=87.84 Aligned_cols=101 Identities=20% Similarity=0.268 Sum_probs=78.3
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCC--ccc---------c--cccCHHHHHHHHHHHHhCCcEEEcCceEEEE
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL---------Q--RLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 201 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~--~~l---------~--~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 201 (414)
+|+|||+|+.|+.+|..|++.|.+|+++++.. ... . ....+.+...+.+.+++.|++++.++++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999997531 110 0 0012466777888888899999999999999
Q ss_pred EecCC-CcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 202 EAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 202 ~~~~~-~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
....+ +....+.+++|+++.+|.+|+|+|..|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22346778888889999999999998753
No 113
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.63 E-value=1.6e-07 Score=87.12 Aligned_cols=99 Identities=12% Similarity=0.257 Sum_probs=76.4
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc---------cc---ccCHHHHHHHHHHHHhC-CcEEEcCceEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL---------QR---LFTPSLAQRYEQLYQQN-GVKFVKGASIKN 200 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~---~~~~~~~~~~~~~l~~~-gv~i~~~~~v~~ 200 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+... +. ....++...+.+.+++. +++++.+ +|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 479999999999999999999999999999753211 00 01135666777777776 7888765 8888
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+...+++ ..+.+.+|+++.+|.+|+|+|..|..
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCC
Confidence 8765333 46788899899999999999998754
No 114
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.62 E-value=2.3e-07 Score=90.60 Aligned_cols=99 Identities=11% Similarity=0.196 Sum_probs=77.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc--------------------cc---------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ--------------------RL--------------------- 172 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~--------------------- 172 (414)
.+|+|||+|+.|+.+|..|+++|.+|+++++.+.+.. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4799999999999999999999999999998764310 00
Q ss_pred ----------------------cCHHHHHHHHHHHHhCCcEEEcCceEEEEEecC---CCcEEEEEeCCCcEEecCEEEE
Q 014997 173 ----------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLEDGSTIDADTIVI 227 (414)
Q Consensus 173 ----------------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~---~~~~~~v~~~~g~~i~~D~vi~ 227 (414)
....+.+.+.+.+++.||++++++.|+++..++ ++. ..|.+++| ++.||.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 123444567777788899999999999998541 233 35677776 799999999
Q ss_pred ccCCcCC
Q 014997 228 GIGAKPT 234 (414)
Q Consensus 228 a~G~~p~ 234 (414)
|+|..+.
T Consensus 163 AtG~~s~ 169 (401)
T 2gqf_A 163 ATGGLSM 169 (401)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9999874
No 115
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.61 E-value=2.1e-08 Score=99.02 Aligned_cols=96 Identities=23% Similarity=0.335 Sum_probs=71.9
Q ss_pred CeEEEECCChHHHHHHHHHHhCC--CcEEEEeeCCccccccc---------C-HHHHHHHHHHHHhCCcEEEcCceEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLF---------T-PSLAQRYEQLYQQNGVKFVKGASIKNL 201 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~~~~---------~-~~~~~~~~~~l~~~gv~i~~~~~v~~i 201 (414)
|+|+|||||+.|+.+|..|++++ .+||+|++++...-... . +++...+.+.+++.||+++.+ +|++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999865 78999999875431111 1 011111234566789999976 68999
Q ss_pred EecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 202 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 202 ~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
+.+ .+ .|.+++|+++++|.+|+|+|.++.
T Consensus 82 d~~--~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DPD--AN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ETT--TT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred ECC--CC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 754 22 678999999999999999998753
No 116
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.60 E-value=2e-07 Score=94.65 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=81.6
Q ss_pred CeEEEECCChHHHHHHHHHH-hCCCcEEEEeeCCccccc--------------------cc----------------CHH
Q 014997 134 KKVVVVGGGYIGMEVAAAAV-GWKLDTTIIFPENHLLQR--------------------LF----------------TPS 176 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~-~~g~~Vtlv~~~~~~l~~--------------------~~----------------~~~ 176 (414)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+... .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 999999999986533100 00 235
Q ss_pred HHHHHHHHHHhCCc--EEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCC--cCCC
Q 014997 177 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA--KPTV 235 (414)
Q Consensus 177 ~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~--~p~~ 235 (414)
+.+.+.+..++.|+ +++++++|++++.++++....|.+.+|+++.||.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 66777888888898 89999999999876555556788999999999999999994 5543
No 117
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.60 E-value=7e-08 Score=94.18 Aligned_cols=99 Identities=22% Similarity=0.287 Sum_probs=72.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCC--CcEEEEeeCCcccccccCHHHH---------HHHHHHHHhCCcEEEcCceEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTPSLA---------QRYEQLYQQNGVKFVKGASIKNL 201 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~~~~~~~~~---------~~~~~~l~~~gv~i~~~~~v~~i 201 (414)
+|+|+|||+|+.|+.+|..|++.+ .+|+||++++......+...+. ..-.+.+.+.||+++.+ +|+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 799999999999999999998765 5899999886532211111110 01123456789999876 68888
Q ss_pred EecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 202 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 202 ~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
+.+ .+ .+.+.+|+++++|.+|+|+|.+++..
T Consensus 81 d~~--~~--~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 81 DPD--KK--LVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp ETT--TT--EEEETTSCEEECSEEEECCCEEECGG
T ss_pred Ecc--Cc--EEEecccceeecceeeeccCCccccC
Confidence 753 22 57889999999999999999988754
No 118
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.59 E-value=2.9e-07 Score=86.34 Aligned_cols=98 Identities=16% Similarity=0.320 Sum_probs=76.2
Q ss_pred eEEEECCChHHHHHHHHHHhCCC-cEEEEeeCCc---c--------ccc---cc-CHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH---L--------LQR---LF-TPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~---~--------l~~---~~-~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
+|+|||+|+.|+.+|..|++.|. +|+++++... . .+. .+ ...+.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999998521 0 111 11 245667777888889999998 788
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
..+...++ . ..+.+.+|+++.+|.+|+|+|..|..
T Consensus 82 ~~i~~~~~-~-~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSKKDS-H-FVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEEETT-E-EEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEcCC-E-EEEEEcCCCEEECCEEEECCCCCCCC
Confidence 88875432 2 35667888899999999999987754
No 119
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.56 E-value=4.2e-07 Score=85.15 Aligned_cols=100 Identities=10% Similarity=0.143 Sum_probs=70.2
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc---cc---c------cccCHHHHHHHHHHHHhCC-cEEEcCceEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---LL---Q------RLFTPSLAQRYEQLYQQNG-VKFVKGASIKN 200 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~---~l---~------~~~~~~~~~~~~~~l~~~g-v~i~~~~~v~~ 200 (414)
-.|+|||+|+.|+.+|..|+++|.+|+++++... +. + ...++++.+...+.+.+.+ +.++.. .+..
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 85 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEK-TVVM 85 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEEC-CEEE
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEee-EEEE
Confidence 3699999999999999999999999999997531 10 0 0112345555555555554 555544 4555
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+...+++. ..+.+.+|+++.+|.||+|||.+|..
T Consensus 86 ~~~~~~~~-~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 86 ITKQSTGL-FEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp EEECTTSC-EEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred eeecCCCc-EEEEECCCCEEEeCEEEEccCCcccc
Confidence 55443433 46788999999999999999998753
No 120
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.54 E-value=6.9e-07 Score=85.78 Aligned_cols=98 Identities=16% Similarity=0.266 Sum_probs=74.8
Q ss_pred CeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCC------------ccccc----------------------------c
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPEN------------HLLQR----------------------------L 172 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~------------~~l~~----------------------------~ 172 (414)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ +++.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 00000 0
Q ss_pred cC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 173 FT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 173 ~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
.. ..+...+.+.+++.|++++.++.|.++...+++ ..|.+.++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 01 235556677778899999999999999865333 24667776 5999999999998754
No 121
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.54 E-value=3.9e-07 Score=86.07 Aligned_cols=99 Identities=22% Similarity=0.255 Sum_probs=76.4
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc------------cccc----cCHHHHHHHHHHHHhCCcEEEcCce
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL------------LQRL----FTPSLAQRYEQLYQQNGVKFVKGAS 197 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~------------l~~~----~~~~~~~~~~~~l~~~gv~i~~~~~ 197 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.. + .+.. ...++.+.+.+.+++.|++++. ..
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~ 86 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DE 86 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-ee
Confidence 579999999999999999999999999999872 1 1110 1235666777888889999998 57
Q ss_pred EEEEEec--CCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 198 IKNLEAG--SDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 198 v~~i~~~--~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+..+... ++. ...+.+.+|+++.+|.+|+|+|..|..
T Consensus 87 v~~i~~~~~~~~-~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 87 VQGVQHDATSHP-YPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEEECTTSSS-CCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEEeccCCCc-eEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 8888754 222 124566778899999999999998764
No 122
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.54 E-value=6.2e-08 Score=94.91 Aligned_cols=98 Identities=21% Similarity=0.335 Sum_probs=73.9
Q ss_pred CeEEEECCChHHHHHHHHHHh---CCCcEEEEeeCCcccccc----------cCHHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~---~g~~Vtlv~~~~~~l~~~----------~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
++|+|||||+.|+.+|..|++ .|.+|+++++++.+.... ...++...+.+.+++.|++++.+ +++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 899999999887542110 11223334566677889999988 8888
Q ss_pred EEecCCCcEEEEEeCCCc----EEecCEEEEccCCcCCCh
Q 014997 201 LEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~----~i~~D~vi~a~G~~p~~~ 236 (414)
++.+ +. .|.+.+++ ++.+|.+|+|+|.+|+..
T Consensus 81 i~~~--~~--~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAK--SS--MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETT--TT--EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCC--CC--EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 8753 22 35555554 499999999999998754
No 123
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.53 E-value=2.9e-07 Score=87.14 Aligned_cols=98 Identities=16% Similarity=0.232 Sum_probs=75.5
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEee----CCccc------------cc----ccCHHHHHHHHHHHHhCCcEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP----ENHLL------------QR----LFTPSLAQRYEQLYQQNGVKFV 193 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~----~~~~l------------~~----~~~~~~~~~~~~~l~~~gv~i~ 193 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+. +. ....++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999998 21110 00 1124566777788888999999
Q ss_pred cCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 194 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 194 ~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
.++ +..+....+. ..+.+ +|+++.+|.+|+|+|..|..
T Consensus 89 ~~~-v~~i~~~~~~--~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 89 TET-VTKVDFSSKP--FKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CCC-CCEEECSSSS--EEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred EeE-EEEEEEcCCE--EEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 987 8888754332 24555 77889999999999998764
No 124
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=9.5e-08 Score=92.28 Aligned_cols=99 Identities=23% Similarity=0.313 Sum_probs=72.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc----------cccC-HHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------RLFT-PSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
.+.+++|||+|+.|+.+|..|+++| +|+++++.+.+.. ...+ +++.....+.+++.||+++.++.++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 5789999999999999999999999 9999998864311 0011 11111234556778999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
++.. .. .|. .+|+++.+|.+|+|||.+|...
T Consensus 86 id~~--~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDRG--RK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EETT--TT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EECC--CC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 8753 22 344 5778899999999999988743
No 125
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.53 E-value=7.7e-07 Score=88.21 Aligned_cols=99 Identities=25% Similarity=0.430 Sum_probs=79.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc-------------------c-----------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-------------------R----------------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~----------------------- 171 (414)
.+|+|||||..|+.+|..|++.|.+|+|+++.+.+.. .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 5799999999999999999999999999998753210 0
Q ss_pred -------------------cc-----CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEE
Q 014997 172 -------------------LF-----TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 227 (414)
Q Consensus 172 -------------------~~-----~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~ 227 (414)
.+ ...+.+.+.+.+++.||+++++++|+++..+ ++.+..|.+.+|+++.||.||+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEE
Confidence 00 0233445666778899999999999999854 5565678888888899999999
Q ss_pred ccCCcC
Q 014997 228 GIGAKP 233 (414)
Q Consensus 228 a~G~~p 233 (414)
|+|..+
T Consensus 186 AtGg~s 191 (447)
T 2i0z_A 186 AVGGKS 191 (447)
T ss_dssp CCCCSS
T ss_pred CCCCCc
Confidence 999876
No 126
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.53 E-value=1.8e-07 Score=91.44 Aligned_cols=98 Identities=24% Similarity=0.464 Sum_probs=74.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC--cEEEEeeCCccc------cc-cc-----CHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLL------QR-LF-----TPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~--~Vtlv~~~~~~l------~~-~~-----~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. .. .+ ...+.....+.+++.|++++. .++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v 79 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRM 79 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEE
Confidence 3689999999999999999999998 899999876321 10 00 111112234567789999999 899
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+.++.. .+ .+.+.+|+++.+|.+|+|+|.+|..
T Consensus 80 ~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 80 VSIDRE--GR--KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEEETT--TT--EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEEECC--CC--EEEECCCCEEECCEEEEeeCCCccC
Confidence 999754 22 5778899999999999999998764
No 127
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.51 E-value=3.6e-07 Score=90.15 Aligned_cols=101 Identities=24% Similarity=0.433 Sum_probs=75.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC--cEEEEeeCCcccc------c-ccC-----HHHHHHHHHHHHhCCcEEEcCceE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQ------R-LFT-----PSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~--~Vtlv~~~~~~l~------~-~~~-----~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
..+|+|||+|+.|+.+|..|+++|. +|+++++.+.+.. . .+. ..+.....+.+++.||+++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999997 7999998754210 0 000 011111235677889999999999
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChh
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP 237 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 237 (414)
+.+... +. .|.+.+|+++.+|.+|+|+|.+|....
T Consensus 84 ~~i~~~--~~--~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINRD--RQ--QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEETT--TT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEECC--CC--EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 999753 22 577788889999999999999987543
No 128
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.51 E-value=1.7e-06 Score=83.43 Aligned_cols=98 Identities=20% Similarity=0.296 Sum_probs=71.2
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-------------------------------------------
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------- 171 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------- 171 (414)
.|+|||||+.|+-+|..|++.|.+|+|+++.+.+-..
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 5999999999999999999999999999986432000
Q ss_pred ------------ccC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe-CCC--cEEecCEEEEccCCcC
Q 014997 172 ------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDG--STIDADTIVIGIGAKP 233 (414)
Q Consensus 172 ------------~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~-~~g--~~i~~D~vi~a~G~~p 233 (414)
.++ ..+...+.+..++.|++++.++.++.+..+ ++.+..+.. .++ .++.+|.||-|.|...
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 001 124455666777889999999999988754 444444333 233 3689999999999653
No 129
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.51 E-value=6e-07 Score=89.46 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=76.4
Q ss_pred CeEEEECCChHHHHHHHHHHh---CCCc---EEEEeeCCccccc------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG---WKLD---TTIIFPENHLLQR------------------------------------ 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~---~g~~---Vtlv~~~~~~l~~------------------------------------ 171 (414)
++|+|||+|+.|+.+|..|++ .|.+ |+++++.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 9999987543100
Q ss_pred -------------cc--CHHHHHHHHHHHHhCCcE--EEcCceEEEEEecCCCcEEEEEeCC---C--cEEecCEEEEcc
Q 014997 172 -------------LF--TPSLAQRYEQLYQQNGVK--FVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGI 229 (414)
Q Consensus 172 -------------~~--~~~~~~~~~~~l~~~gv~--i~~~~~v~~i~~~~~~~~~~v~~~~---g--~~i~~D~vi~a~ 229 (414)
.+ ...+.+.+.+.+++.|++ +++++.|+.++..+++....|.+.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 034556677777778998 9999999999865442223455543 4 578999999999
Q ss_pred C--CcCCCh
Q 014997 230 G--AKPTVS 236 (414)
Q Consensus 230 G--~~p~~~ 236 (414)
| ..|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677643
No 130
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.51 E-value=6.7e-08 Score=95.35 Aligned_cols=98 Identities=22% Similarity=0.314 Sum_probs=74.2
Q ss_pred CeEEEECCChHHHHHHHHHHh--CCCcEEEEeeCCccccccc----------CHHHHHHHHHHHHhCCcEEEcCceEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLF----------TPSLAQRYEQLYQQNGVKFVKGASIKNL 201 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~----------~~~~~~~~~~~l~~~gv~i~~~~~v~~i 201 (414)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+..... ..++...+.+.+++.||+++.+ .++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 7899999999876532110 0111112334556789999975 88888
Q ss_pred EecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 202 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 202 ~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
+.+ .. .+.+++|+++.+|.+|+|+|.+|+..
T Consensus 82 d~~--~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPD--AN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETT--TT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECC--CC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 753 22 57788898999999999999997654
No 131
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.51 E-value=2.7e-07 Score=93.78 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc-------------------------c---------cc--cCHH
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------Q---------RL--FTPS 176 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------~---------~~--~~~~ 176 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++++.+. + .. -.++
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 3579999999999999999999999999999975431 0 00 1246
Q ss_pred HHHHHHHHHHhCCc--EEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccC--CcCCC
Q 014997 177 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTV 235 (414)
Q Consensus 177 ~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G--~~p~~ 235 (414)
+...+.+..++.|+ +++++++|++++.+++.....|.+.+|+++.||.||+|+| .+|..
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 67777777788787 7899999999976555445578889999999999999999 55543
No 132
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.51 E-value=5.2e-07 Score=88.39 Aligned_cols=100 Identities=17% Similarity=0.212 Sum_probs=78.5
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc--------ccc----------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL--------LQR---------------------------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~--------l~~---------------------------------- 171 (414)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.. .+.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 47999999999999999999999999999986411 000
Q ss_pred ----------------ccC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCc--EEecCEEEEccCCc
Q 014997 172 ----------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAK 232 (414)
Q Consensus 172 ----------------~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~--~i~~D~vi~a~G~~ 232 (414)
.++ ..+...+.+.+++.|++++.+++|+++..++++....+.+.+|+ ++.+|.||.|+|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 000 13445666777778999999999999987655555567778887 79999999999987
Q ss_pred C
Q 014997 233 P 233 (414)
Q Consensus 233 p 233 (414)
.
T Consensus 166 s 166 (421)
T 3nix_A 166 R 166 (421)
T ss_dssp C
T ss_pred h
Confidence 5
No 133
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.50 E-value=6.2e-07 Score=87.87 Aligned_cols=99 Identities=24% Similarity=0.427 Sum_probs=75.2
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCc--EEEEeeCCccccc--ccCHHHH---------HHHHHHHHhCCcEEEcCceEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLD--TTIIFPENHLLQR--LFTPSLA---------QRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~--Vtlv~~~~~~l~~--~~~~~~~---------~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
++|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.-. .+.+.+. ....+.+++.||+++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999977 9999988653210 0111110 1123456788999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
++.. .+ .+.+.+|+++.+|.+|+|+|.+|...
T Consensus 83 id~~--~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDVQ--TR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EETT--TT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EECC--CC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 9754 22 67788999999999999999987643
No 134
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.49 E-value=1e-06 Score=85.81 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=78.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc-------------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 170 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 170 (414)
.+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998653300
Q ss_pred --c-------------ccC-HHHHHHHHHHHHhC-CcEEEcCceEEEEEecCCCcEE-EEEeCCCcEEecCEEEEccCCc
Q 014997 171 --R-------------LFT-PSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVA-AVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 171 --~-------------~~~-~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
. .++ ..+.+.+.+.+++. |++++.+++|++++.++++ +. .+.+.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 0 001 24455666677777 9999999999999875443 32 5778899899999999999987
Q ss_pred CC
Q 014997 233 PT 234 (414)
Q Consensus 233 p~ 234 (414)
..
T Consensus 166 s~ 167 (399)
T 2x3n_A 166 SY 167 (399)
T ss_dssp CH
T ss_pred hH
Confidence 64
No 135
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.49 E-value=4.2e-07 Score=92.94 Aligned_cols=142 Identities=15% Similarity=0.172 Sum_probs=93.6
Q ss_pred EEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhhc----CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 93 IVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE----KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 93 viAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~----~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
..|+.++......+|....++....+...+...+...+. ..-.|+|||+|..|+.+|..|++.|.+|+|+++.+.+
T Consensus 77 ~~c~~ch~~~~~~~p~~~~~~~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 77 FYCNECHSFDIKPMPFSDAKKKKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS 156 (566)
T ss_dssp CGGGGTCCCCCCCCTTTTSCCCCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred chhhhhcCCCcCCCCCCCCCCCcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 457777665413344444544444433222222212222 2347999999999999999999999999999987532
Q ss_pred ccc-----------------------------------------------------------------------------
Q 014997 169 LQR----------------------------------------------------------------------------- 171 (414)
Q Consensus 169 l~~----------------------------------------------------------------------------- 171 (414)
...
T Consensus 157 gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~ 236 (566)
T 1qo8_A 157 GGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARV 236 (566)
T ss_dssp CTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSS
T ss_pred CCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCC
Confidence 100
Q ss_pred --c--------cCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeC--CCc--EEecCEEEEccCCcCC
Q 014997 172 --L--------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 --~--------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~--~g~--~i~~D~vi~a~G~~p~ 234 (414)
. .+..+...+.+.+++.||++++++.|+++..++++++..|.+. +|+ .+.+|.||+|+|....
T Consensus 237 ~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 237 DRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp CCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 0 0112335566677888999999999999986543776666654 675 6899999999997553
No 136
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.48 E-value=7.5e-07 Score=90.07 Aligned_cols=103 Identities=21% Similarity=0.277 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC--ccc-----------ccccCHHHHHHHHHHHHhCCcEEEcCceEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL-----------QRLFTPSLAQRYEQLYQQNGVKFVKGASIK 199 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~--~~l-----------~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~ 199 (414)
..+|+|||||+.|+.+|..|++.|.+|+++++.. ... +....+++...+.+.+++.|++++.++++.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4579999999999999999999999999997531 110 001134677778888889999999999999
Q ss_pred EEEecCC-CcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 200 NLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 200 ~i~~~~~-~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
.+....+ +....|.+.+|+++.+|.+|+|+|.+|..
T Consensus 292 ~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 9974321 22346788899899999999999987753
No 137
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.45 E-value=4.2e-07 Score=89.18 Aligned_cols=100 Identities=25% Similarity=0.377 Sum_probs=76.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCc--EEEEeeCCccc------c-ccc-----CHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLD--TTIIFPENHLL------Q-RLF-----TPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~--Vtlv~~~~~~l------~-~~~-----~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
.++|+|||+|+.|+.+|..|++.|.+ |+++++.+.+. . ..+ ...+.....+.+++.||+++.++.+
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 46899999999999999999999977 99999876431 1 011 1122222346678899999999999
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
..+... .+ .+.+.+|+.+.+|.+|+|+|.+|...
T Consensus 89 ~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 89 VSLDPA--AH--TVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEEETT--TT--EEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEEECC--CC--EEEECCCCEEEeeEEEEccCCccCCC
Confidence 999753 22 57788999999999999999988643
No 138
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.45 E-value=8.7e-07 Score=83.28 Aligned_cols=98 Identities=19% Similarity=0.283 Sum_probs=75.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc---c--------ccc----ccCHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------l~~----~~~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++... + .+. ...+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999996410 0 011 1124666777788889999999986 8
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
..++...+ .+ .+ +.++.++.+|.+|+|+|..|..
T Consensus 85 ~~i~~~~~-~~-~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 85 NKVDLQNR-PF-RL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EEEECSSS-SE-EE-EESSCEEEEEEEEECCCEEECC
T ss_pred eEEEecCC-EE-EE-EeCCCEEEcCEEEECCCCCcCC
Confidence 88875432 22 33 5677889999999999998764
No 139
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.45 E-value=9.1e-07 Score=83.99 Aligned_cols=100 Identities=18% Similarity=0.259 Sum_probs=76.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC---cc--------ccc----ccCHHHHHHHHHHHHhCCcEEEcCc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN---HL--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGA 196 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~---~~--------l~~----~~~~~~~~~~~~~l~~~gv~i~~~~ 196 (414)
...+|+|||+|+.|+.+|..|++.|.+|+++++.. .+ .+. ...+++...+.+.+++.|++++.++
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ 92 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED 92 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee
Confidence 34689999999999999999999999999998641 00 011 1124666777778888999999987
Q ss_pred eEEEEEecCCCcEEEE-EeCCCcEEecCEEEEccCCcCCC
Q 014997 197 SIKNLEAGSDGRVAAV-KLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 197 ~v~~i~~~~~~~~~~v-~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+..++. .+.. .+ .+.+|+++.+|.+|+|+|..|..
T Consensus 93 -v~~i~~-~~~~--~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 93 -VESVSL-HGPL--KSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp -EEEEEC-SSSS--EEEEETTSCEEEEEEEEECCCEEECC
T ss_pred -EEEEEe-CCcE--EEEEeCCCCEEEeCEEEECCCCCccC
Confidence 888875 2222 45 67788899999999999998764
No 140
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.44 E-value=1.9e-06 Score=81.52 Aligned_cols=97 Identities=12% Similarity=0.127 Sum_probs=70.8
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-------------------ccCHHHHHHHH------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------------LFTPSLAQRYE------------ 182 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~~~~~~------------ 182 (414)
.+|+|||||.+|+.+|..|++.|.+|+|+++.+.+..+ ...+.+.+.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999987543110 01122222222
Q ss_pred -------------------------------HHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEe-cCEEEEccC
Q 014997 183 -------------------------------QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIG 230 (414)
Q Consensus 183 -------------------------------~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~-~D~vi~a~G 230 (414)
+.+. .|++++++++|++++.++++ ..|.+.+|+.+. +|.||.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCC
Confidence 2222 28899999999999876554 257788888764 999999999
Q ss_pred CcC
Q 014997 231 AKP 233 (414)
Q Consensus 231 ~~p 233 (414)
...
T Consensus 160 ~~~ 162 (336)
T 1yvv_A 160 APQ 162 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 141
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.43 E-value=1.4e-06 Score=83.29 Aligned_cols=64 Identities=13% Similarity=0.257 Sum_probs=48.7
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCCChhhhhc-CC
Q 014997 178 AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERV-GL 243 (414)
Q Consensus 178 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~l~~~-gl 243 (414)
...+.+.+++.|++++++++|+++..++++.+ .|.+.+| .++.||.||+|+|.... .+++.+ |+
T Consensus 153 ~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~ 219 (369)
T 3dme_A 153 MLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETS
T ss_pred HHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCC
Confidence 34456667889999999999999987655433 4778887 48999999999998753 556655 54
No 142
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.43 E-value=7.6e-07 Score=88.22 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=75.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCC--cEEEEeeCCcccc----c---------------------------------c
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQ----R---------------------------------L 172 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~--~Vtlv~~~~~~l~----~---------------------------------~ 172 (414)
...+|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. . .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35789999999999999999999999 9999998743210 0 0
Q ss_pred --------------c--------------CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC---Cc---
Q 014997 173 --------------F--------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--- 218 (414)
Q Consensus 173 --------------~--------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~---g~--- 218 (414)
+ ...+.+.+.+..++.++.++++++|+.++..+++ ..|.+.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~--~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS--WVVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE--EEEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe--EEEEEeecCCCCeeE
Confidence 0 0134556666666667889999999999765332 2445544 66
Q ss_pred EEecCEEEEccCC--cCCC
Q 014997 219 TIDADTIVIGIGA--KPTV 235 (414)
Q Consensus 219 ~i~~D~vi~a~G~--~p~~ 235 (414)
++.+|.||+|+|. .|+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEESEEEECCCSSSSBCB
T ss_pred EEEeCEEEECCCCCCCCCC
Confidence 7999999999998 6654
No 143
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.42 E-value=1e-06 Score=85.74 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=74.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----ccCHHHHH----------------------------
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----LFTPSLAQ---------------------------- 179 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~~~~~~---------------------------- 179 (414)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+.+... .+.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653111 01221111
Q ss_pred ---------------HHHHHHHh--CCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 180 ---------------RYEQLYQQ--NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 180 ---------------~~~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
.+.+.|.+ .|++++.+++|++++.++++ + .+.+.+|+++.+|.||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-V-QMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-E-EEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-E-EEEECCCCEEECCEEEECCCcchh
Confidence 12222222 37899999999999876444 3 578899999999999999998764
No 144
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.42 E-value=1.3e-06 Score=82.20 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=74.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc---c--------ccc---ccCHHHHHHHHHHHHhCCcEEEcCceE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR---LFTPSLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------l~~---~~~~~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++... . .+. ....++...+.+.+++.|++++. ..+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 46899999999999999999999999999998421 0 111 11245666777788889999998 678
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
..+....+ . ..+.+ ++.++.+|.+|+|+|..|..
T Consensus 95 ~~i~~~~~-~-~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 95 RSIKKTQG-G-FDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEETT-E-EEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEEeCC-E-EEEEE-CCCEEEeCEEEECCCCCccc
Confidence 88875432 2 23555 56689999999999988763
No 145
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.41 E-value=1.2e-06 Score=82.16 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=74.4
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc----c----c-----------c-cccCHHHHHHHHHHHHhCCcEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH----L----L-----------Q-RLFTPSLAQRYEQLYQQNGVKFV 193 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~----~----l-----------~-~~~~~~~~~~~~~~l~~~gv~i~ 193 (414)
..|+|||+|+.|+.+|..|+++|.+|+++++... + . + ...++++...+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 4699999999999999999999999999997531 0 0 0 01124566777788889999988
Q ss_pred cCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 194 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 194 ~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
... +.......+. ..+.+.++.++.+|.+|+|||.+|..
T Consensus 85 ~~~-v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 85 TET-IDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp CCC-EEEEECSSSS--EEEEETTCCEEEEEEEEECCCEEECC
T ss_pred EeE-EEEeecCCCc--eEEEECCCeEEEEeEEEEcccccccc
Confidence 764 4555433222 35667888899999999999998754
No 146
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.40 E-value=2.1e-06 Score=87.82 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=77.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------------
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 171 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 171 (414)
..+|+|||+|..|+.+|..|++.|.+|+|+++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999987543110
Q ss_pred ----------------------------------------------ccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecC
Q 014997 172 ----------------------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 205 (414)
Q Consensus 172 ----------------------------------------------~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 205 (414)
..+..+...+.+.+++.||++++++.|+++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 0002334556667788899999999999998654
Q ss_pred CCcEEEEEeC--CCc--EEecCEEEEccCCcC
Q 014997 206 DGRVAAVKLE--DGS--TIDADTIVIGIGAKP 233 (414)
Q Consensus 206 ~~~~~~v~~~--~g~--~i~~D~vi~a~G~~p 233 (414)
++++..|.+. +|+ ++.+|.||+|+|...
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 4776656554 675 689999999999754
No 147
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.38 E-value=2.1e-06 Score=83.38 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=76.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc------ccc------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL------LQR------------------------------------ 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~------l~~------------------------------------ 171 (414)
.+|+|||||+.|+.+|..|++.|.+|+|+++.+.. ...
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987631 000
Q ss_pred --c--------------cC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe-CCCc--EEecCEEEEccCC
Q 014997 172 --L--------------FT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGA 231 (414)
Q Consensus 172 --~--------------~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~ 231 (414)
. ++ ..+.+.+.+.+.+.|++++.+++|+++..++++.+ .|.+ .+|+ ++.+|.||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 0 01 23444566667778999999999999986433333 4566 6786 7999999999998
Q ss_pred cCCC
Q 014997 232 KPTV 235 (414)
Q Consensus 232 ~p~~ 235 (414)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 7653
No 148
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.37 E-value=6.7e-07 Score=88.75 Aligned_cols=101 Identities=14% Similarity=0.235 Sum_probs=72.8
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccc--c----cccCHH------HHHHHHHHHHhCCcEEEcCceEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL--Q----RLFTPS------LAQRYEQLYQQNGVKFVKGASIK 199 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l--~----~~~~~~------~~~~~~~~l~~~gv~i~~~~~v~ 199 (414)
++|+|||||+.|+.+|..|+++ |.+|+++++.+.+. + ..+... +.....+.+++.|++++.+++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999887542 1 001111 11113466788999999999999
Q ss_pred EEEecCCCcEEEEE-eCCCcEEecCEEEEccCCcCCCh
Q 014997 200 NLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 200 ~i~~~~~~~~~~v~-~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
.++.. +.. ..+. ..+++++.+|.+|+|+|.+|...
T Consensus 83 ~id~~-~~~-v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDVE-NQL-IAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEETT-TTE-EEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEECC-CCE-EEEEecCceEEEEcCEEEECCCcccCCC
Confidence 99754 222 2232 23556899999999999988643
No 149
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.36 E-value=1.1e-06 Score=82.16 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=73.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEE-EeeCCcc------------ccc----ccCHHHHHHHHHHHHhCCcEEEcC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTI-IFPENHL------------LQR----LFTPSLAQRYEQLYQQNGVKFVKG 195 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtl-v~~~~~~------------l~~----~~~~~~~~~~~~~l~~~gv~i~~~ 195 (414)
..+|+|||+|+.|+.+|..|++.|.+|++ +++. .+ .+. ....++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 36899999999999999999999999999 9873 21 011 012467778888888999999998
Q ss_pred ceEEEEEecCC-CcEEEE-EeCCCcEEecCEEEEccCCcCCCh
Q 014997 196 ASIKNLEAGSD-GRVAAV-KLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 196 ~~v~~i~~~~~-~~~~~v-~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
.+.++ .+++ +.. .+ ...++ ++.+|.+|+|+|..|...
T Consensus 83 -~v~~i-~~~~~~~~-~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSF-TIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp -CEEEE-EECTTSCE-EEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred -EEEEE-ecCCCCcE-EEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 78888 4331 222 32 22344 899999999999987643
No 150
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.36 E-value=2.1e-06 Score=82.89 Aligned_cols=62 Identities=16% Similarity=0.311 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 177 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 177 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
+...+.+.+++.|++++.++.|+++..++ +.+ .|.+.+| ++.+|.||+|+|.... .++...+
T Consensus 166 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~~~ 227 (382)
T 1ryi_A 166 VCKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHHTT
T ss_pred HHHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHhcC
Confidence 45566777888999999999999998653 444 6777777 7999999999998653 4555544
No 151
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.35 E-value=1.4e-06 Score=86.40 Aligned_cols=100 Identities=23% Similarity=0.399 Sum_probs=70.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCcccc------cccC-----HHHHHHHHHHH-HhCCcEEEcCceE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQ------RLFT-----PSLAQRYEQLY-QQNGVKFVKGASI 198 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~------~~~~-----~~~~~~~~~~l-~~~gv~i~~~~~v 198 (414)
.++|+|||+|+.|+.+|..|++. +.+|+++++.+.+.. ..+. .++.....+.+ ++.|++++.++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 36899999999999999999987 789999999875311 0000 11111122233 6789999999999
Q ss_pred EEEEecCCCcEEEEEeCCC-cEEecCEEEEccCCcCCCh
Q 014997 199 KNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g-~~i~~D~vi~a~G~~p~~~ 236 (414)
..++.. . ..+.+.++ .++.+|.+|+|+|.+|...
T Consensus 83 ~~i~~~--~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDTG--Y--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECSS--E--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEecC--C--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 998532 2 25666777 4899999999999988643
No 152
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.35 E-value=7.2e-06 Score=83.25 Aligned_cols=98 Identities=14% Similarity=0.187 Sum_probs=75.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc--------c------------cccC----------------HHH
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL--------Q------------RLFT----------------PSL 177 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------~------------~~~~----------------~~~ 177 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + ..+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875421 0 0001 234
Q ss_pred HHHHHHHHHhCC--cEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCC
Q 014997 178 AQRYEQLYQQNG--VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 231 (414)
Q Consensus 178 ~~~~~~~l~~~g--v~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 231 (414)
.+++....++.+ ++++++++|.+++.++++....|.+.+|+++.||.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 555556566665 678999999999865444445688889989999999999995
No 153
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.35 E-value=3e-06 Score=79.49 Aligned_cols=98 Identities=19% Similarity=0.225 Sum_probs=73.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc---cc--------c---cccCHHHHHHHHHHHHhCCcEEEcCceEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---LL--------Q---RLFTPSLAQRYEQLYQQNGVKFVKGASIK 199 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~---~l--------~---~~~~~~~~~~~~~~l~~~gv~i~~~~~v~ 199 (414)
-.|+|||+|+.|+.+|..|+++|.+|+++++... .+ + ....+++.........+.+..+..+..+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKS 86 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeee
Confidence 3699999999999999999999999999997531 11 0 01124566666677788888888877666
Q ss_pred EEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 200 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 200 ~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
..... .. .+...+++++.+|.+|+|||.+|..
T Consensus 87 ~~~~~-~~---~~~~~~~~~~~~d~liiAtGs~~~~ 118 (312)
T 4gcm_A 87 VEDKG-EY---KVINFGNKELTAKAVIIATGAEYKK 118 (312)
T ss_dssp EEECS-SC---EEEECSSCEEEEEEEEECCCEEECC
T ss_pred eeeee-cc---eeeccCCeEEEeceeEEcccCccCc
Confidence 55432 22 3456777899999999999998764
No 154
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.34 E-value=8.5e-07 Score=88.15 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=75.5
Q ss_pred CeEEEECCChHHHHHHHHHHhCC-----CcEEEEeeCCccccc-------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWK-----LDTTIIFPENHLLQR------------------------------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g-----~~Vtlv~~~~~~l~~------------------------------------- 171 (414)
.+|+|||+|+.|+.+|..|++.| .+|+++++.+.+...
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~ 110 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKH 110 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhc
Confidence 37999999999999999999999 899999987632100
Q ss_pred -----------c--cCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCC-CcE--EEEEeCCCc----EEecCEEEEccCC
Q 014997 172 -----------L--FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRV--AAVKLEDGS----TIDADTIVIGIGA 231 (414)
Q Consensus 172 -----------~--~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~--~~v~~~~g~----~i~~D~vi~a~G~ 231 (414)
. ...++.+.+....++.+++++++++|++++..++ +.. ..|.+.+|. ++.+|.||+|+|.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 111 DRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred CceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 0 0123445555555667899999999999975421 222 256666665 8999999999999
Q ss_pred cCCCh
Q 014997 232 KPTVS 236 (414)
Q Consensus 232 ~p~~~ 236 (414)
.|...
T Consensus 191 ~p~~p 195 (463)
T 3s5w_A 191 TPRIP 195 (463)
T ss_dssp EECCC
T ss_pred CCCCc
Confidence 87644
No 155
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.34 E-value=1.1e-06 Score=90.11 Aligned_cols=103 Identities=19% Similarity=0.271 Sum_probs=75.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccc----------cccc-CH--HHHHHHHHHHHhCCcEEEcCc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL----------QRLF-TP--SLAQRYEQLYQQNGVKFVKGA 196 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l----------~~~~-~~--~~~~~~~~~l~~~gv~i~~~~ 196 (414)
..++|+|||||+.|+.+|..|++. |.+|+++++.+.+. ...+ .. .+...+....++.|+++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457899999999999999999998 89999999987631 1000 11 122334555678899999999
Q ss_pred eEEEEEecCCCcEEEEE-eCCCc--EEecCEEEEccCCcCCCh
Q 014997 197 SIKNLEAGSDGRVAAVK-LEDGS--TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 197 ~v~~i~~~~~~~~~~v~-~~~g~--~i~~D~vi~a~G~~p~~~ 236 (414)
.|..+... +..+ .+. +.+|+ .+.+|.+|+|+|.+|...
T Consensus 115 ~V~~id~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINKE-EKTI-TIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEECC-CCEE-EEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 99999754 3332 333 24565 789999999999987643
No 156
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.33 E-value=3.2e-06 Score=82.08 Aligned_cols=98 Identities=15% Similarity=0.154 Sum_probs=71.9
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc------ccCHHHH------------------------------
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLA------------------------------ 178 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------~~~~~~~------------------------------ 178 (414)
+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+... .+.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999986543111 0111100
Q ss_pred -----------------------------HHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEc
Q 014997 179 -----------------------------QRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 228 (414)
Q Consensus 179 -----------------------------~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 228 (414)
..+.+.|.+ .+..+++++++++++..+++.+ .+.+.||+++.+|+||-|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGA 161 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEEC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEEC
Confidence 122333322 3456888999999987666654 688999999999999999
Q ss_pred cCCcC
Q 014997 229 IGAKP 233 (414)
Q Consensus 229 ~G~~p 233 (414)
-|...
T Consensus 162 DG~~S 166 (412)
T 4hb9_A 162 DGSNS 166 (412)
T ss_dssp CCTTC
T ss_pred CCCCc
Confidence 99865
No 157
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.32 E-value=1.5e-06 Score=84.99 Aligned_cols=100 Identities=21% Similarity=0.284 Sum_probs=73.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC--cEEEEeeCCccccc--ccCHHHH-HHH-H----HHHHhCCcEEEcCceEEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQR--LFTPSLA-QRY-E----QLYQQNGVKFVKGASIKNLE 202 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~--~Vtlv~~~~~~l~~--~~~~~~~-~~~-~----~~l~~~gv~i~~~~~v~~i~ 202 (414)
..+|+|||+|+.|+.+|..|+++|. +|+++++.+.+... .+.+.+. ... . +.+++.|++++.+++++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 4689999999999999999999987 49999988753211 0111111 000 0 03567799999999999997
Q ss_pred ecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 203 AGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 203 ~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
.. +. .|.+.+|+++.+|.+|+|+|.+|...
T Consensus 87 ~~--~~--~v~~~~g~~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 87 PQ--AH--TVALSDGRTLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp TT--TT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred CC--CC--EEEECCCCEEECCEEEECCCCCCCCC
Confidence 53 22 56778888999999999999988653
No 158
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.32 E-value=2.8e-06 Score=82.61 Aligned_cols=63 Identities=19% Similarity=0.315 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 177 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 177 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
+...+.+.+++.|++++.+++|+++..+ ++.+..+.+.+| ++.+|.||+|+|.... .+++..+
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~-~l~~~~g 238 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSS-VLAEMAG 238 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHH-HHHHHcC
Confidence 3344666678889999999999999865 455667888888 6999999999998653 3444444
No 159
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.31 E-value=1.6e-06 Score=86.51 Aligned_cols=101 Identities=20% Similarity=0.287 Sum_probs=63.8
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCcc------cccccCH------HH-------HHHHHHHHHhCCcEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL------LQRLFTP------SL-------AQRYEQLYQQNGVKF 192 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~------l~~~~~~------~~-------~~~~~~~l~~~gv~i 192 (414)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+ ++..+.. .+ ........++.|+++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 83 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEA 83 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEE
Confidence 6899999999999999999998 8999999998763 1111111 11 112222223579999
Q ss_pred EcCceEEEEEecCCCcEEEEEe-CCCc--EEecCEEEEccCCcCCCh
Q 014997 193 VKGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 193 ~~~~~v~~i~~~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~ 236 (414)
+.+++|..++.. +..+ .+.. .+|+ .+.+|.+|+|+|.+|...
T Consensus 84 ~~~~~V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 84 LVETRAHAIDRA-AHTV-EIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp ECSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EECCEEEEEECC-CCEE-EEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999754 3322 3332 3465 799999999999987643
No 160
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.31 E-value=3.4e-06 Score=84.56 Aligned_cols=50 Identities=24% Similarity=0.382 Sum_probs=41.7
Q ss_pred HHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 182 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 182 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
.+.+++.|++|++++.|++|..+ ++++..|++.||+++.||.||++++..
T Consensus 228 ~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 228 IKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 34557889999999999999864 677888999999999999999987654
No 161
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.30 E-value=2.8e-08 Score=97.16 Aligned_cols=48 Identities=25% Similarity=0.275 Sum_probs=37.9
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCC----C--CEEEeCCCcEEecCeEEEccCCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIE----K--QTLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~----~--~~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
.+.+++.|++++.+++|+++..+ . ..|.+++| ++.+|+||+|||+.+.
T Consensus 116 ~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 116 KSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 34556789999999999998754 2 25667666 7999999999999863
No 162
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.30 E-value=4.5e-06 Score=80.56 Aligned_cols=54 Identities=17% Similarity=0.271 Sum_probs=43.1
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 179 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 179 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
..+.+.+++.|++++.+++|+++..+ ++.+..|.+.+| ++.||.||+|+|....
T Consensus 153 ~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 153 TAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred HHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHH
Confidence 34556677889999999999999865 455555778777 7999999999998653
No 163
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.30 E-value=5e-06 Score=85.18 Aligned_cols=99 Identities=19% Similarity=0.236 Sum_probs=76.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc-cc-----------------------cc------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l-----------------------~~------------------ 171 (414)
-.|+|||||..|+++|..|++.|.+|+++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999997631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 172 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 -----------~~~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
..+ ..+...+.+.+++ .|++++ +..|+.+..+ ++.+..|.+.+|.++.||.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 001 1345566677777 699995 5689998754 56677888889988999999999998653
No 164
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.28 E-value=5.7e-06 Score=84.43 Aligned_cols=99 Identities=17% Similarity=0.251 Sum_probs=76.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc-cc-----------------------cc------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l-----------------------~~------------------ 171 (414)
-.|+|||||..|+++|..+++.|.+|.++++... +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 5799999999999999999999999999998631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 172 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 -----------~~~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
..+ ..+...+.+.+++ .|++++ +..|+.+..+ ++.+..|.+.+|..+.||.||+|+|..++
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 000 1244556667777 599995 5789998754 56677889999999999999999998654
No 165
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.27 E-value=3.9e-06 Score=79.84 Aligned_cols=96 Identities=18% Similarity=0.198 Sum_probs=69.6
Q ss_pred CeEEEECCChHHHHHHHHHHh---CCCcEEEEeeCCcccccc----------------------cCH---H---------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------------------FTP---S--------- 176 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~---~g~~Vtlv~~~~~~l~~~----------------------~~~---~--------- 176 (414)
.+|+|||+|.+|+-+|..|++ .|.+|+++++.+.+..+. .++ .
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 379999999999999999999 899999999864321100 000 1
Q ss_pred -----------------------------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEE
Q 014997 177 -----------------------------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 227 (414)
Q Consensus 177 -----------------------------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~ 227 (414)
+...+....++.|+++++++.|++++.++++ + .|.+.+|+.+.+|.||+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~ 159 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVL 159 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEE
Confidence 1112222333348999999999999876444 3 57888888789999999
Q ss_pred ccCC
Q 014997 228 GIGA 231 (414)
Q Consensus 228 a~G~ 231 (414)
|++.
T Consensus 160 A~p~ 163 (342)
T 3qj4_A 160 TMPV 163 (342)
T ss_dssp CSCH
T ss_pred CCCH
Confidence 9884
No 166
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.26 E-value=4.4e-06 Score=80.86 Aligned_cols=99 Identities=20% Similarity=0.271 Sum_probs=75.5
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc------------------------------------------c
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------R 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------~ 171 (414)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+-. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3699999999999999999999999999998742100 0
Q ss_pred ccC--------------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe---CCCcEEecCEEEEccCCcC
Q 014997 172 LFT--------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 172 ~~~--------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~---~~g~~i~~D~vi~a~G~~p 233 (414)
.++ ..+.+.+.+.+++.|++++.+++|+++..+ ++.+..|.+ .++.++.+|.||.|.|...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 000 123456667777789999999999999865 555544655 4556899999999999866
No 167
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.26 E-value=5.1e-06 Score=82.37 Aligned_cols=100 Identities=20% Similarity=0.220 Sum_probs=76.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc---------------c---------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ---------------R--------------------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------~--------------------------- 171 (414)
.+|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998753210 0
Q ss_pred ---------ccC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeC---CCc--EEecCEEEEccCCcCC
Q 014997 172 ---------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 ---------~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~ 234 (414)
.++ ..+.+.+.+.+++.|++++.+++|+++..+ ++.+..|.+. +|+ ++.||.||.|.|....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 001 235566677777899999999999999864 4455445543 675 7999999999998765
No 168
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.25 E-value=9.3e-06 Score=83.15 Aligned_cols=101 Identities=20% Similarity=0.299 Sum_probs=79.0
Q ss_pred CeEEEECCChHHHHHHHHHHhC------CCcEEEEeeCCccccc------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW------KLDTTIIFPENHLLQR------------------------------------ 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------------------------------------ 171 (414)
-+|+|||+|+.|+.+|..|++. |.+|+|+++.+.+-..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999986432100
Q ss_pred c--------c---C--------------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeC------CC---
Q 014997 172 L--------F---T--------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE------DG--- 217 (414)
Q Consensus 172 ~--------~---~--------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~------~g--- 217 (414)
. + + ..+.+.+.+.+++.|+++++++.++++..++++.+..|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 0 0 13455677777888999999999999987666777667775 33
Q ss_pred ------cEEecCEEEEccCCcCC
Q 014997 218 ------STIDADTIVIGIGAKPT 234 (414)
Q Consensus 218 ------~~i~~D~vi~a~G~~p~ 234 (414)
.++.+|.||.|.|....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCceEEECCEEEEeeCCCch
Confidence 68999999999999764
No 169
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.23 E-value=7.5e-06 Score=83.84 Aligned_cols=100 Identities=15% Similarity=0.212 Sum_probs=77.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc------------------------------c------------
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL------------------------------Q------------ 170 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------~------------ 170 (414)
..+|+|||||+.|+-+|..|++.|.+|+|+++.+..- .
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 5789999999999999999999999999999872110 0
Q ss_pred --------------------cccC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeC-CC--cEEecCEEE
Q 014997 171 --------------------RLFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIV 226 (414)
Q Consensus 171 --------------------~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~-~g--~~i~~D~vi 226 (414)
..++ ..+...+.+.+++.|++++.+++|+++... ++....|.+. +| .++.||.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 0011 235566777778899999999999999854 3444567776 66 579999999
Q ss_pred EccCCcC
Q 014997 227 IGIGAKP 233 (414)
Q Consensus 227 ~a~G~~p 233 (414)
.|+|...
T Consensus 182 ~AdG~~S 188 (591)
T 3i3l_A 182 DAGGSGG 188 (591)
T ss_dssp ECCGGGC
T ss_pred ECCCCcc
Confidence 9999865
No 170
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.23 E-value=8.7e-06 Score=82.04 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=75.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc--------ccc----------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL--------LQR---------------------------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~--------l~~---------------------------------- 171 (414)
.+|+|||||+.|+-+|..|++.|.+|+|+++.+.. .+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 47999999999999999999999999999987410 000
Q ss_pred -------------------ccC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE--EeCCCc--EEecCEEEE
Q 014997 172 -------------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV--KLEDGS--TIDADTIVI 227 (414)
Q Consensus 172 -------------------~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v--~~~~g~--~i~~D~vi~ 227 (414)
.++ ..+.+.+.+.+++.|++++.+++|+++..+ ++.+..+ ...+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 001 134456677778899999999999999864 4554434 445674 799999999
Q ss_pred ccCCcCC
Q 014997 228 GIGAKPT 234 (414)
Q Consensus 228 a~G~~p~ 234 (414)
|+|....
T Consensus 167 AdG~~S~ 173 (512)
T 3e1t_A 167 ASGNRTR 173 (512)
T ss_dssp CCCTTCS
T ss_pred CCCcchH
Confidence 9998653
No 171
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.22 E-value=9.4e-06 Score=77.89 Aligned_cols=53 Identities=17% Similarity=0.332 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcC
Q 014997 178 AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 178 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 233 (414)
...+.+.+++.|++++.+++|+++..++++ ..+.+.+| ++.+|.||+|+|...
T Consensus 152 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 152 IKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCccH
Confidence 344556677889999999999999865443 35677777 499999999999754
No 172
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.21 E-value=7.5e-06 Score=83.77 Aligned_cols=101 Identities=18% Similarity=0.311 Sum_probs=75.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc-cc-----------------------cc----------------
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR---------------- 171 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l-----------------------~~---------------- 171 (414)
..-.|+|||||..|+++|..|++.|.+|+++++.+. +. ..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 346899999999999999999999999999997631 10 00
Q ss_pred -------------ccC-HHHHHHHHHHHHhC-CcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 172 -------------LFT-PSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 -------------~~~-~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
..+ ..+...+.+.+++. |++++.+ .|+.+..+ ++.+..|.+.+|+++.||.||+|+|..++
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 011 13455566677774 9999754 78888653 45666688889999999999999997754
No 173
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.21 E-value=1.4e-06 Score=86.52 Aligned_cols=100 Identities=21% Similarity=0.246 Sum_probs=71.3
Q ss_pred eEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccc----------cccc---CH-HHHHHHHHHHHhCCcEEEcCceE
Q 014997 135 KVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL----------QRLF---TP-SLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l----------~~~~---~~-~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
+|+|||+|+.|+.+|..|++. |.+|+++++.+.+. .... ++ .+.....+.+++.|++++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 699999999999999999998 99999999987421 0010 11 11112345677889999999999
Q ss_pred EEEEecCCCcEEEEEe-CC--CcEEecCEEEEccCCcCCCh
Q 014997 199 KNLEAGSDGRVAAVKL-ED--GSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~-~~--g~~i~~D~vi~a~G~~p~~~ 236 (414)
..++.++ ..+ .+.. .+ ++++.+|.+|+|+|.+|...
T Consensus 82 ~~i~~~~-~~v-~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 82 TNVDPET-KTI-KVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp EEEEGGG-TEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEcCC-CEE-EEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 9987542 222 2322 12 45799999999999988643
No 174
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.20 E-value=1.2e-05 Score=83.87 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=42.5
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcC
Q 014997 179 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 179 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 233 (414)
..+.+.+++.|++++++++|+++..+++ .+ .|.+.+|.++.+|.||+|+|...
T Consensus 421 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 421 RNVLELAQQQGLQIYYQYQLQNFSRKDD-CW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEeCC-eE-EEEECCCCEEECCEEEECCCcch
Confidence 3445556778999999999999986544 33 67888888899999999999864
No 175
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.20 E-value=2.4e-06 Score=87.18 Aligned_cols=101 Identities=23% Similarity=0.257 Sum_probs=70.8
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccc------cccc-----CH--HHHHHHHHHHHhCCcEEEcCceE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLF-----TP--SLAQRYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l------~~~~-----~~--~~~~~~~~~l~~~gv~i~~~~~v 198 (414)
++|+|||||+.|+.+|..|+++ +.+|+++++.+.+. +..+ .. .+........++.|++++.+++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999988 78999999987642 1000 00 01112233334579999999999
Q ss_pred EEEEecCCCcEEEEE-eCCCc--EEecCEEEEccCCcCCCh
Q 014997 199 KNLEAGSDGRVAAVK-LEDGS--TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~-~~~g~--~i~~D~vi~a~G~~p~~~ 236 (414)
++++.. ...+ .+. +.+|+ ++.+|.+|+|+|.+|...
T Consensus 82 ~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDRA-AKLV-TVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECC-CCEE-EEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 999753 3322 333 23354 799999999999987643
No 176
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.20 E-value=1e-06 Score=87.50 Aligned_cols=90 Identities=14% Similarity=0.212 Sum_probs=69.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc-------cccc-cCHHHHHHHHHHHHhCCcEEEcCceEEEEEe
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-------LQRL-FTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 203 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~-------l~~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 203 (414)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++.. ++.++.....+.+++.||++++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 3578999999999999999999999999999998764 1211 355666777788899999999998652
Q ss_pred cCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 204 GSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 204 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
. .+.++++ .+.+|.||+|+|..
T Consensus 197 --~----~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 --R----DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp --T----TBCHHHH-HSSCSEEEECCCCC
T ss_pred --c----EEEhhHh-HhhCCEEEEecCCC
Confidence 0 1223332 25799999999986
No 177
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.19 E-value=1.2e-05 Score=82.22 Aligned_cols=102 Identities=20% Similarity=0.225 Sum_probs=76.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------------
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 171 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 171 (414)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 458999999999999999999999999999987532100
Q ss_pred --------------------------------------c--------cCHHHHHHHHHHHHhCCcEEEcCceEEEEEecC
Q 014997 172 --------------------------------------L--------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 205 (414)
Q Consensus 172 --------------------------------------~--------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 205 (414)
. .+..+...+.+.+++.||++++++.++++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 0 011234456667788899999999999997553
Q ss_pred CCcEEEEEeC--CCc--EEecCEEEEccCCcCC
Q 014997 206 DGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 234 (414)
Q Consensus 206 ~~~~~~v~~~--~g~--~i~~D~vi~a~G~~p~ 234 (414)
++++..|.+. +|+ .+.+|.||+|+|..+.
T Consensus 286 ~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 3676666654 664 6899999999997653
No 178
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.17 E-value=8.2e-06 Score=79.56 Aligned_cols=100 Identities=20% Similarity=0.323 Sum_probs=74.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc-----------------------------------------
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------------------------- 170 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------------- 170 (414)
+..+|+|||||+.|+-+|..|++.|.+|+|+++.+.+..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 346899999999999999999999999999998753210
Q ss_pred -c---ccC-----------------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEcc
Q 014997 171 -R---LFT-----------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGI 229 (414)
Q Consensus 171 -~---~~~-----------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~ 229 (414)
. .++ ..+.+.+.+.+++ ++++++++|++++.++++ ..+.+.+|+++.+|.||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECC
Confidence 0 000 1223344444444 889999999999865443 35788999999999999999
Q ss_pred CCcCCC
Q 014997 230 GAKPTV 235 (414)
Q Consensus 230 G~~p~~ 235 (414)
|.....
T Consensus 178 G~~S~v 183 (407)
T 3rp8_A 178 GSHSAL 183 (407)
T ss_dssp CTTCSS
T ss_pred CcChHH
Confidence 987654
No 179
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.17 E-value=5.8e-06 Score=80.46 Aligned_cols=101 Identities=18% Similarity=0.308 Sum_probs=72.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc------cCH-H-------------H--------------
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------FTP-S-------------L-------------- 177 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------~~~-~-------------~-------------- 177 (414)
...+|+|||||+.|+.+|..|++.|.+|+|+++.+.+..+. +.+ . +
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 34689999999999999999999999999999875432110 000 0 0
Q ss_pred ----------------------HHHHHHHHHhC--CcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcC
Q 014997 178 ----------------------AQRYEQLYQQN--GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 178 ----------------------~~~~~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 233 (414)
...+.+.|.+. +++++++++|++++.++++ + .+.+.+|+++.+|.||.|.|...
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK-W-TLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS-E-EEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE-E-EEEECCCcEEecCEEEECCCcch
Confidence 01122222221 3578889999999865443 3 57888998899999999999876
Q ss_pred C
Q 014997 234 T 234 (414)
Q Consensus 234 ~ 234 (414)
.
T Consensus 183 ~ 183 (398)
T 2xdo_A 183 K 183 (398)
T ss_dssp S
T ss_pred h
Confidence 4
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.16 E-value=2.3e-06 Score=84.69 Aligned_cols=101 Identities=19% Similarity=0.222 Sum_probs=71.8
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCcccc----------ccc-C-HHHHHHHHHHHHhCCcEEEcCceEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQ----------RLF-T-PSLAQRYEQLYQQNGVKFVKGASIK 199 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~----------~~~-~-~~~~~~~~~~l~~~gv~i~~~~~v~ 199 (414)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+.. ... + .++.....+.+++.||+++.++.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 3699999999999999999987 899999998865310 000 1 1111223456778899999999999
Q ss_pred EEEecCCCcEEEEEe-CCCc--EEecCEEEEccCCcCCCh
Q 014997 200 NLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 200 ~i~~~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~ 236 (414)
.+..+ +..+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 81 ~i~~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 118 (447)
T 1nhp_A 81 AIQPK-EHQV-TVKDLVSGEERVENYDKLIISPGAVPFEL 118 (447)
T ss_dssp EEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEeCC-CCEE-EEEecCCCceEEEeCCEEEEcCCCCcCCC
Confidence 88743 2222 3332 3465 489999999999988643
No 181
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.15 E-value=8.5e-06 Score=82.57 Aligned_cols=100 Identities=16% Similarity=0.183 Sum_probs=75.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc--------------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------------- 169 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 169 (414)
.+|+|||||+.|+-+|..|+++|.+|+|+++.+.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999874220
Q ss_pred -------c--------------c-------ccC-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCc--EEEEEeCCC-
Q 014997 170 -------Q--------------R-------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR--VAAVKLEDG- 217 (414)
Q Consensus 170 -------~--------------~-------~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~--~~~v~~~~g- 217 (414)
. . .++ ..+...+.+.+++.|++++++++|++++.++++. -..+.+.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 0 0 000 2345566777788899999999999998765411 224555555
Q ss_pred --cEEecCEEEEccCCcC
Q 014997 218 --STIDADTIVIGIGAKP 233 (414)
Q Consensus 218 --~~i~~D~vi~a~G~~p 233 (414)
.++.||.||.|.|...
T Consensus 166 ~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEEEEEEEECCCTTC
T ss_pred CeEEEEeCEEEECCCCcc
Confidence 6799999999999864
No 182
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.13 E-value=7.9e-06 Score=83.39 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=75.5
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc-------------------------------------ccc----
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------QRL---- 172 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------~~~---- 172 (414)
..|+|||+|+.|+-+|..|++.|.+|+|+++.+.+. ...
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999753210 000
Q ss_pred ---------------c-CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe--CCC-cEEecCEEEEccCCcC
Q 014997 173 ---------------F-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL--EDG-STIDADTIVIGIGAKP 233 (414)
Q Consensus 173 ---------------~-~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~--~~g-~~i~~D~vi~a~G~~p 233 (414)
+ ...+.+.+.+.+++.|++++.+++|++++.++++. .+.+ .+| +++.+|.||.|.|...
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 0 12345566777777899999999999998765553 3455 788 6899999999999865
No 183
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.13 E-value=1.5e-05 Score=76.95 Aligned_cols=62 Identities=18% Similarity=0.458 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 177 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 177 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
+...+.+.+++.|++++.+++|+++...+++ + .+.+++| ++.+|.||+|+|...+ .++...+
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~~-~l~~~~g 213 (389)
T 2gf3_A 152 CIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWNS-KLLSKLN 213 (389)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGHH-HHGGGGT
T ss_pred HHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccHH-HHhhhhc
Confidence 3345566677889999999999999865443 2 4667666 7999999999998654 4444444
No 184
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.12 E-value=3e-05 Score=78.60 Aligned_cols=56 Identities=16% Similarity=0.290 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 179 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 179 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
..+.+.+++.|++++.+ +|+++..++++.+..|.+.+|+++.+|.||.|.|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 34455566789999999 899998765666667888999889999999999987653
No 185
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.10 E-value=2.6e-05 Score=81.47 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=41.2
Q ss_pred HHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCc-EEecCEEEEccCCcCC
Q 014997 180 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPT 234 (414)
Q Consensus 180 ~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~-~i~~D~vi~a~G~~p~ 234 (414)
.+.+.+++.|++++.+++|+++..++++ + .|.+.+|. ++.+|.||+|+|....
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcchh
Confidence 3445556789999999999999876444 3 67888887 7999999999998743
No 186
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.10 E-value=3.5e-06 Score=79.76 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHh--CCCcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~ 168 (414)
...|+|||+|+.|+.+|..|++ .|.+|+++++.+.+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 4679999999999999999964 59999999987654
No 187
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.09 E-value=8.7e-06 Score=81.36 Aligned_cols=101 Identities=16% Similarity=0.260 Sum_probs=70.9
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccc------cccc------CHHHHHHHHHHH-HhCCcEEEcCceE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLF------TPSLAQRYEQLY-QQNGVKFVKGASI 198 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l------~~~~------~~~~~~~~~~~l-~~~gv~i~~~~~v 198 (414)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+. +..+ ...+.....+.+ ++.|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999986 89999999876531 1000 011111123445 4459999999999
Q ss_pred EEEEecCCCcEEEEEe-CCCc--EEecCEEEEccCCcCCCh
Q 014997 199 KNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~ 236 (414)
..++.+ +..+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 117 ~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDTE-KKIV-YAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECC-CCEE-EEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 999753 2222 3333 4566 799999999999988643
No 188
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.09 E-value=3.8e-06 Score=84.46 Aligned_cols=101 Identities=17% Similarity=0.317 Sum_probs=68.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc---------ccCH-HHHHHHHHHH--HhCCcEEEcCceEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------LFTP-SLAQRYEQLY--QQNGVKFVKGASIKN 200 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~~-~~~~~~~~~l--~~~gv~i~~~~~v~~ 200 (414)
.++|||||||+.|+.+|..|++.+.+||||++.+..+-. .+++ ++...+.+.+ ++.+++++.+ ++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~ 120 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATS 120 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEE
Confidence 358999999999999999999999999999998753211 1111 1111122322 3457888875 6788
Q ss_pred EEecCCCcEEEEE------------------eCCCcEEecCEEEEccCCcCCCh
Q 014997 201 LEAGSDGRVAAVK------------------LEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 201 i~~~~~~~~~~v~------------------~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
|+.+. ..+ .+. ..++.++++|.+|+|+|.+|+..
T Consensus 121 ID~~~-k~V-~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 121 INPDR-NTV-TIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEGGG-TEE-EEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEhhh-CEE-EEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 87532 222 221 13567899999999999998753
No 189
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.08 E-value=1e-05 Score=77.69 Aligned_cols=60 Identities=17% Similarity=0.127 Sum_probs=44.3
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 179 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 179 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
..+.+.+++.|++++.++.|+++..++++ ..|.+.+| ++.||.||+|+|.... .++...+
T Consensus 158 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~--~~V~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 217 (381)
T 3nyc_A 158 QGYLRGIRRNQGQVLCNHEALEIRRVDGA--WEVRCDAG-SYRAAVLVNAAGAWCD-AIAGLAG 217 (381)
T ss_dssp HHHHHHHHHTTCEEESSCCCCEEEEETTE--EEEECSSE-EEEESEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEeCCe--EEEEeCCC-EEEcCEEEECCChhHH-HHHHHhC
Confidence 34556667889999999999999865433 46777777 7999999999997543 3444333
No 190
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.08 E-value=4.8e-06 Score=82.23 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=68.4
Q ss_pred eEEEECCChHHHHHHHHHHhCC--CcEEEEeeCCcccc-cc-cC---------HH--HHHHHHHHHHhCCcEEEcCceEE
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQ-RL-FT---------PS--LAQRYEQLYQQNGVKFVKGASIK 199 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~-~~-~~---------~~--~~~~~~~~l~~~gv~i~~~~~v~ 199 (414)
||+|||+|+.|+.+|..|+++| .+|+++++++...- +. ++ .. +.....+.+++.||+++.+++|+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 6999999999999999999887 57999998764321 00 00 00 00112345677899999999999
Q ss_pred EEEecCCCcEEEEEeC---CCcEEecCEEEEccCCcCCC
Q 014997 200 NLEAGSDGRVAAVKLE---DGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 200 ~i~~~~~~~~~~v~~~---~g~~i~~D~vi~a~G~~p~~ 235 (414)
.+... .+...+... ++.++.+|.+|+|+|.+|+.
T Consensus 82 ~id~~--~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~ 118 (437)
T 4eqs_A 82 AINDE--RQTVSVLNRKTNEQFEESYDKLILSPGASANS 118 (437)
T ss_dssp EEETT--TTEEEEEETTTTEEEEEECSEEEECCCEEECC
T ss_pred EEEcc--CcEEEEEeccCCceEEEEcCEEEECCCCcccc
Confidence 99743 222223222 23468999999999999874
No 191
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.08 E-value=2.8e-05 Score=73.20 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=73.3
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCcccccc-------------------------------------cC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQRL-------------------------------------FT 174 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~~-------------------------------------~~ 174 (414)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+.... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4899999999999999999998 99999999865431000 01
Q ss_pred HHHHHHHHHHHHh-CCcEEEcCceEEEEEecC--C-C--cEEEEEeC--------------CCcEEec------------
Q 014997 175 PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGS--D-G--RVAAVKLE--------------DGSTIDA------------ 222 (414)
Q Consensus 175 ~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~--~-~--~~~~v~~~--------------~g~~i~~------------ 222 (414)
.++...+.+.+.+ .||+++.++.+.++..++ + + ++..|... ++.++.|
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 2334455555666 499999999999997653 3 4 66666542 3457999
Q ss_pred ---CEEEEccCCcCCC
Q 014997 223 ---DTIVIGIGAKPTV 235 (414)
Q Consensus 223 ---D~vi~a~G~~p~~ 235 (414)
+.||.|+|.....
T Consensus 226 ~~~~~VV~ATG~~~~~ 241 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPF 241 (326)
T ss_dssp TTCCEEEECCCCC--C
T ss_pred ccCCEEEECcCCCchH
Confidence 9999999987543
No 192
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.08 E-value=7.5e-06 Score=81.52 Aligned_cols=98 Identities=22% Similarity=0.275 Sum_probs=71.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc------------------------------cCH-HH-----
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------------------FTP-SL----- 177 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------------------~~~-~~----- 177 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-..+ ++. .+
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 479999999999999999999999999999766542110 000 00
Q ss_pred -----H--HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcE--EecCEEEEccCCcCCCh
Q 014997 178 -----A--QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST--IDADTIVIGIGAKPTVS 236 (414)
Q Consensus 178 -----~--~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~--i~~D~vi~a~G~~p~~~ 236 (414)
. ..+...+++.||+++.+ .+..+.. . ...|.+.+|++ +.+|.+|+|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~---~-~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP---T-HVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET---T-EEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC---C-eEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 0 33444556679999987 5666652 2 23677788888 99999999999987643
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.07 E-value=3.5e-06 Score=84.53 Aligned_cols=99 Identities=21% Similarity=0.385 Sum_probs=70.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccc------cccc--CH--HHHHH--------------------
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLF--TP--SLAQR-------------------- 180 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l------~~~~--~~--~~~~~-------------------- 180 (414)
..+++|||+|+.|+.+|..|++. +.+|+++++.+.+. ...+ .. .....
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSF 90 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHh
Confidence 45799999999999999999876 88999999886431 1000 00 00000
Q ss_pred HH---H--HHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 181 YE---Q--LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 181 ~~---~--~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+. + .+.+.||+++.++.+..++... + .|.+.+|+++.+|.+|+|+|.+|..
T Consensus 91 ~~~~~~l~~~~~~gv~~~~g~~v~~id~~~--~--~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 91 YVSAQDLPHIENGGVAVLTGKKVVQLDVRD--N--MVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp SBCTTTTTTSTTCEEEEEETCCEEEEEGGG--T--EEEETTSCEEEEEEEEECCCEEECC
T ss_pred hcchhhhhhhhcCCeEEEcCCEEEEEECCC--C--EEEECCCCEEECCEEEECCCCCCCC
Confidence 00 0 0124689999999999997542 2 5778899999999999999998864
No 194
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.07 E-value=5.4e-06 Score=83.09 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=72.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCC---CcEEEEeeCCcccc----------cc-c-CHHHHHHHHHHHHhCCcEEEcCce
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWK---LDTTIIFPENHLLQ----------RL-F-TPSLAQRYEQLYQQNGVKFVKGAS 197 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g---~~Vtlv~~~~~~l~----------~~-~-~~~~~~~~~~~l~~~gv~i~~~~~ 197 (414)
..+|+|||+|+.|+.+|..|++.| .+|+++++.+.+.. .. . .+++.....+.+++.||+++.++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 368999999999999999999987 99999998864310 00 0 111111224567788999999999
Q ss_pred EEEEEecCCCcEEEEEeC-C--CcEEecCEEEEccCCcCCCh
Q 014997 198 IKNLEAGSDGRVAAVKLE-D--GSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 198 v~~i~~~~~~~~~~v~~~-~--g~~i~~D~vi~a~G~~p~~~ 236 (414)
+..+..+ +. .+.+. + +.++.+|.+|+|+|.+|...
T Consensus 115 v~~i~~~-~~---~v~v~~~g~~~~~~~d~lviAtG~~p~~p 152 (490)
T 2bc0_A 115 VQSIDYD-AK---TVTALVDGKNHVETYDKLIFATGSQPILP 152 (490)
T ss_dssp EEEEETT-TT---EEEEEETTEEEEEECSEEEECCCEEECCC
T ss_pred EEEEECC-CC---EEEEEeCCcEEEEECCEEEECCCCCcCCC
Confidence 9999743 22 23333 3 35799999999999988643
No 195
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.06 E-value=3.4e-05 Score=75.85 Aligned_cols=55 Identities=25% Similarity=0.300 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCcEEEcCc---eEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcC
Q 014997 178 AQRYEQLYQQNGVKFVKGA---SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 178 ~~~~~~~l~~~gv~i~~~~---~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 233 (414)
...+.+.+++.|++|++++ .|+++..+ ++.+..|.+.+|+++.||.||+|+|...
T Consensus 164 ~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 164 LVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 3445566778899999999 99999864 5566668999998899999999999754
No 196
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.05 E-value=1.5e-05 Score=80.44 Aligned_cols=97 Identities=15% Similarity=0.238 Sum_probs=69.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc---------------------------------ccc-----C
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ---------------------------------RLF-----T 174 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~-----~ 174 (414)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ... .
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 122 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGI 122 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhH
Confidence 35799999999999999999999999999999873211 000 0
Q ss_pred HHHHHHH----H---HHH-----HhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 175 PSLAQRY----E---QLY-----QQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 175 ~~~~~~~----~---~~l-----~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
.++...+ . +.+ ++.||++++...+..+.. . .+.+. |+.+.+|.+|+|+|.+|...
T Consensus 123 ~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~---~---~v~~~-g~~~~~d~lViATGs~p~~p 189 (523)
T 1mo9_A 123 KEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN---H---TVEAA-GKVFKAKNLILAVGAGPGTL 189 (523)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET---T---EEEET-TEEEEBSCEEECCCEECCCC
T ss_pred HHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC---C---EEEEC-CEEEEeCEEEECCCCCCCCC
Confidence 1111112 2 445 778999995567777753 2 45555 67899999999999988643
No 197
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.05 E-value=1e-05 Score=80.55 Aligned_cols=98 Identities=24% Similarity=0.311 Sum_probs=69.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc-------------------------------------cC-H
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-------------------------------------FT-P 175 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------------------------~~-~ 175 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-..+ ++ +
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 479999999999999999999999999999986431000 00 0
Q ss_pred H-----------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCCCh
Q 014997 176 S-----------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 176 ~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 236 (414)
. +...+.+.+++.||+++.++.+ .+. .. ...+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~---~~-~~~v~~~~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FET---AH-SIRVNGLDGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEE---TT-EEEEEETTSCEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eee---CC-EEEEEecCCceEEEEcCEEEECCCCCcCCC
Confidence 0 1112345567789999988754 343 12 235666777 6899999999999988643
No 198
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.05 E-value=1.7e-05 Score=79.34 Aligned_cols=93 Identities=23% Similarity=0.287 Sum_probs=68.4
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------ccC----
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----------------------------------LFT---- 174 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~---- 174 (414)
.+|+|||+|+.|+.+|..|+++|.+|+++++. .+... .++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 105 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKL 105 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 58999999999999999999999999999984 21100 000
Q ss_pred --------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeC-CCcEEecCEEEEccCCcCC
Q 014997 175 --------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 175 --------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~-~g~~i~~D~vi~a~G~~p~ 234 (414)
..+...+...+++.||+++.+ .+..+.. . .+.+. +++.+.+|.+|+|+|.+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~---~---~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 106 VAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVDE---H---TLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET---T---EEEETTTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeC---C---EEEEecCCeEEEeCEEEEccCCCcc
Confidence 122334556677889999987 3445542 1 45565 7789999999999999886
No 199
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.04 E-value=3.1e-05 Score=77.75 Aligned_cols=100 Identities=18% Similarity=0.252 Sum_probs=76.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc----------------------c------------------
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------R------------------ 171 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------~------------------ 171 (414)
...+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+.. .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 446899999999999999999999999999997632200 0
Q ss_pred ------------cc-CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCc---EEecCEEEEccCCcC
Q 014997 172 ------------LF-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 233 (414)
Q Consensus 172 ------------~~-~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~---~i~~D~vi~a~G~~p 233 (414)
.+ ...+.+.+.+.+++.|++++.++++++++.++++ + .+.+.++. ++.+|.||.|.|...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCccc
Confidence 00 0234556677778889999999999999876554 3 46666664 799999999999865
No 200
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=1.3e-05 Score=79.84 Aligned_cols=99 Identities=25% Similarity=0.340 Sum_probs=70.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc------------------------------------cCH-
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------------------------FTP- 175 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------------------------~~~- 175 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...+ ++.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 4679999999999999999999999999999986431000 010
Q ss_pred H-----------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCCCh
Q 014997 176 S-----------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 176 ~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 236 (414)
. +...+.+.+++.||+++.++.+. +. .. ...+.+.+| +++.+|.+|+|+|.+|...
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~-~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VS---PS-EISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EE---TT-EEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ec---CC-EEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 0 11123445667899999988653 43 12 234556677 6899999999999988643
No 201
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.03 E-value=2.2e-05 Score=78.12 Aligned_cols=98 Identities=24% Similarity=0.347 Sum_probs=68.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc---------------------------cccc---------cC-H
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL---------------------------LQRL---------FT-P 175 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~---------------------------l~~~---------~~-~ 175 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++.. + .+.. .+ .
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRS 82 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHH
Confidence 4689999999999999999999999999999873 1 0100 01 1
Q ss_pred HHH-------HH-----HHHHHHhC-CcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCCCh
Q 014997 176 SLA-------QR-----YEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 176 ~~~-------~~-----~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 236 (414)
.+. .. ..+.+++. ||+++.+. +..+.. + ...+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~~~---~-~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFKDD---Q-SLTVRLNEGGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEEET---T-EEEEEETTSSEEEEECSEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEccC---C-EEEEEeCCCceEEEEeCEEEEeCCCCCCCC
Confidence 111 11 12345566 99998874 555542 2 235667788 6799999999999987643
No 202
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.01 E-value=2e-05 Score=78.40 Aligned_cols=95 Identities=24% Similarity=0.462 Sum_probs=67.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------ccC-H-
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----------------------------------LFT-P- 175 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~-~- 175 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++.. +... .++ +
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 3579999999999999999999999999999873 2100 000 0
Q ss_pred ----------HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 176 ----------SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 176 ----------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
.+...+.+.+++.||+++.+. +..+.. . .|.+ +|+++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~---~---~v~~-~g~~~~~d~lviAtGs~p~~p 145 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFVDA---H---TIEV-EGQRLSADHIVIATGGRPIVP 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEET---T---EEEE-TTEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEccC---C---EEEE-CCEEEEcCEEEECCCCCCCCC
Confidence 111223345577899999885 344432 2 3455 677899999999999988643
No 203
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.01 E-value=4.1e-05 Score=77.03 Aligned_cols=58 Identities=19% Similarity=0.321 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC-Cc--EEecC-EEEEccCCcC
Q 014997 176 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED-GS--TIDAD-TIVIGIGAKP 233 (414)
Q Consensus 176 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~-g~--~i~~D-~vi~a~G~~p 233 (414)
.+...+.+.+++.|+++++++.++++..++++++..|...+ ++ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 34555666777889999999999999876567777776643 32 58996 9999999754
No 204
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.01 E-value=2e-05 Score=78.05 Aligned_cols=97 Identities=25% Similarity=0.251 Sum_probs=69.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc-----------------------------------cCH-H-
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-----------------------------------FTP-S- 176 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------------------------~~~-~- 176 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++. .+...+ .+. .
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKV 82 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHH
Confidence 46999999999999999999999999999987 221000 010 0
Q ss_pred ----------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC-cEEecCEEEEccCCcCCCh
Q 014997 177 ----------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 177 ----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g-~~i~~D~vi~a~G~~p~~~ 236 (414)
+...+.+.+++.||+++.++.+. +. .+. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-id---~~~-v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 83 QEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-VD---ANT-VRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-EE---TTE-EEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-cc---CCe-EEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 12223456778899999987543 43 222 35666777 6899999999999988643
No 205
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.00 E-value=1.2e-05 Score=77.81 Aligned_cols=98 Identities=16% Similarity=0.290 Sum_probs=70.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhCC--CcEEEEeeCCcc------cccccC-----HHHHH-HHHHHHHhCCcEEEcCceE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHL------LQRLFT-----PSLAQ-RYEQLYQQNGVKFVKGASI 198 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~------l~~~~~-----~~~~~-~~~~~l~~~gv~i~~~~~v 198 (414)
..+|+|||+|+.|+.+|..|++.| .+|+++++.+.. ++..+. .++.. .+.+.+++.|++++.++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 367999999999999999999998 568999876421 111111 11111 2345567889999999999
Q ss_pred EEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 199 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 199 ~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
..+.... . .+.+.+ .++.+|.+|+|+|.+|..
T Consensus 84 ~~i~~~~-~---~v~~~~-~~~~~d~lviAtG~~p~~ 115 (384)
T 2v3a_A 84 TGIDPGH-Q---RIWIGE-EEVRYRDLVLAWGAEPIR 115 (384)
T ss_dssp CEEEGGG-T---EEEETT-EEEECSEEEECCCEEECC
T ss_pred EEEECCC-C---EEEECC-cEEECCEEEEeCCCCcCC
Confidence 8887532 2 455554 479999999999998864
No 206
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.00 E-value=1.6e-05 Score=79.41 Aligned_cols=96 Identities=27% Similarity=0.393 Sum_probs=68.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-------------------------------------ccCH-
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------------------------------LFTP- 175 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~~~~- 175 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-.. .++.
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINVA 85 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 47999999999999999999999999999986433100 0010
Q ss_pred H-----------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cE------EecCEEEEccCCcCC
Q 014997 176 S-----------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--ST------IDADTIVIGIGAKPT 234 (414)
Q Consensus 176 ~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~------i~~D~vi~a~G~~p~ 234 (414)
. +...+.+.+++.||+++.++.+.. +.....+.+.+| ++ +.+|.+|+|+|.+|.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~-----~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 86 NFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE-----DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES-----SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc-----cCCeEEEEecCCCcccccccceEEeCEEEECcCCCCC
Confidence 0 111234556788999999876531 222235666676 56 999999999999884
No 207
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.00 E-value=4.3e-05 Score=72.36 Aligned_cols=138 Identities=20% Similarity=0.257 Sum_probs=89.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCccccc---------------------------------c----c
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR---------------------------------L----F 173 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~---------------------------------~----~ 173 (414)
...|+|||+|+.|+.+|..|+++ |.+|+++++.+.+-.. . .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 35899999999999999999997 9999999987533100 0 0
Q ss_pred CHHHHHHHHHHHHh-CCcEEEcCceEEEEEecCC----------------C--cEEEEEeC--------------CCcEE
Q 014997 174 TPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSD----------------G--RVAAVKLE--------------DGSTI 220 (414)
Q Consensus 174 ~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~----------------~--~~~~v~~~--------------~g~~i 220 (414)
..++.+.+.+.+++ .|++++.++.+.++..+++ + ++..|... ++.++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 12333555566666 5999999999998865432 2 55555541 23479
Q ss_pred ecCEEEEccCCcCCC-----hhhhhcCCccc-CC--CEE--------EcCCCCCCCCcEEEEccccc
Q 014997 221 DADTIVIGIGAKPTV-----SPFERVGLNSS-VG--GIQ--------VDGQFRTRMPGIFAIGDVAA 271 (414)
Q Consensus 221 ~~D~vi~a~G~~p~~-----~~l~~~gl~~~-~g--~i~--------vd~~~~t~~~~IyA~GD~a~ 271 (414)
.++.||.|+|..... ..+.+.++... .| ... |+.+-+ -+|++|++|=.+.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~-v~~gl~~~gm~~~ 304 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTRE-IVPGLIVGGMELS 304 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEE-EETTEEECGGGHH
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCce-EcCCEEEechhhH
Confidence 999999999987652 12334444310 11 111 111111 3699999997765
No 208
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.00 E-value=2.1e-05 Score=78.43 Aligned_cols=98 Identities=26% Similarity=0.293 Sum_probs=69.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc-------------------------------------cC-H
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-------------------------------------FT-P 175 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------------------------~~-~ 175 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-..+ ++ +
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 86 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLD 86 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCHH
Confidence 479999999999999999999999999999986431000 00 0
Q ss_pred H-----------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC-C-cEEecCEEEEccCCcCCCh
Q 014997 176 S-----------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED-G-STIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 176 ~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~-g-~~i~~D~vi~a~G~~p~~~ 236 (414)
. +...+.+.+++.||+++.++.+ .+. .+. ..|.+.+ | +++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~---~~~-~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 87 KMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-ITG---KNQ-VTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EEE---TTE-EEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eec---CCE-EEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 0 1112345667889999988643 332 222 3566666 4 5799999999999988643
No 209
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.99 E-value=2.1e-05 Score=76.70 Aligned_cols=99 Identities=18% Similarity=0.245 Sum_probs=72.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCc-EEEEeeCCccccc----cc----------------------------------
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLD-TTIIFPENHLLQR----LF---------------------------------- 173 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~-Vtlv~~~~~~l~~----~~---------------------------------- 173 (414)
..+|+|||||+.|+.+|..|++.|.+ |+|+++.+.+.+. .+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35899999999999999999999999 9999987542100 00
Q ss_pred ----------------------CHHHHHHHHHHHHh-CC-cEEEcCceEEEEEecCCCcEEEEEeCC---C--cEEecCE
Q 014997 174 ----------------------TPSLAQRYEQLYQQ-NG-VKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADT 224 (414)
Q Consensus 174 ----------------------~~~~~~~~~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~~~v~~~~---g--~~i~~D~ 224 (414)
...+.+.+.+.+++ .| ++++.+++|+++.. +++. .+.+.+ | +++.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v--~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGR--VLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTE--EEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCcc--EEEEecCCCCCceEEecCE
Confidence 01334455555655 35 68999999999986 4442 355544 6 5799999
Q ss_pred EEEccCCcCC
Q 014997 225 IVIGIGAKPT 234 (414)
Q Consensus 225 vi~a~G~~p~ 234 (414)
||.|.|....
T Consensus 161 vV~AdG~~S~ 170 (410)
T 3c96_A 161 LVGADGIHSA 170 (410)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCccch
Confidence 9999998764
No 210
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.98 E-value=3.5e-05 Score=77.32 Aligned_cols=101 Identities=21% Similarity=0.252 Sum_probs=76.5
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc----------------------ccc----------------
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL----------------------QRL---------------- 172 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l----------------------~~~---------------- 172 (414)
.+..+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+. ...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 345689999999999999999999999999999763220 000
Q ss_pred ----c-----------CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCc---EEecCEEEEccCCcC
Q 014997 173 ----F-----------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 233 (414)
Q Consensus 173 ----~-----------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~---~i~~D~vi~a~G~~p 233 (414)
+ ...+.+.+.+.+++.|++++.+++|++++.++++ + .+.+.++. ++.+|.||.|.|...
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECCCTTC
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEcCCCCEEEEeCEEEECCCcch
Confidence 0 0234555667777889999999999999876443 3 46666664 799999999999865
No 211
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.98 E-value=6.7e-05 Score=76.25 Aligned_cols=55 Identities=20% Similarity=0.398 Sum_probs=44.9
Q ss_pred HHHHHHHHhC-CcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 179 QRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 179 ~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
+.+.+.+++. |++++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|....
T Consensus 198 ~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 198 DFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 3345555667 9999999 99999876567777888999988999999999998764
No 212
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.98 E-value=8.1e-06 Score=81.87 Aligned_cols=100 Identities=17% Similarity=0.208 Sum_probs=70.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-------c--cC---HHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------L--FT---PSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~--~~---~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
..+|+|||+|+.|+.+|..|++. .+|+++++.+.+... . ++ .++...+.+.+ +.|++++.++.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~ 185 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALG 185 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEE
Confidence 35799999999999999999999 999999988754111 0 11 12223333333 56999999999988
Q ss_pred EEecCCCcEEEEEeCCCc--EEecCEEEEccCCcCCC
Q 014997 201 LEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTV 235 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~--~i~~D~vi~a~G~~p~~ 235 (414)
+....+ .+.....++++ .+.+|.+|+|+|..|..
T Consensus 186 i~~~~~-~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 186 VFDKGE-YFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp CEECSS-SEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EEcCCc-EEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 875432 22222224453 69999999999998764
No 213
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.98 E-value=3.7e-05 Score=76.13 Aligned_cols=94 Identities=26% Similarity=0.460 Sum_probs=66.7
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc------------------------------------cC---
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------------------------FT--- 174 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------------------------~~--- 174 (414)
.+|+|||||+.|+.+|..|++.|.+|+++++.. +...+ ++
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWET 83 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 579999999999999999999999999999873 21000 00
Q ss_pred ---------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 175 ---------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 175 ---------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
..+...+...+++.||+++.+.. ..+.. . .+.+ +|+++.+|.+|+|+|.+|...
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~i~~---~---~v~~-~g~~~~~d~lviAtGs~p~~p 146 (450)
T 1ges_A 84 LIASRTAYIDRIHTSYENVLGKNNVDVIKGFA-RFVDA---K---TLEV-NGETITADHILIATGGRPSHP 146 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-EEEET---T---EEEE-TTEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEecC---C---EEEE-CCEEEEeCEEEECCCCCCCCC
Confidence 01112233445778999998864 44432 2 3455 677899999999999987643
No 214
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.96 E-value=1.7e-05 Score=78.55 Aligned_cols=95 Identities=23% Similarity=0.328 Sum_probs=66.3
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc----------------------------------ccCH-H---
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------LFTP-S--- 176 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------~~~~-~--- 176 (414)
+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-.. ..+. .
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 82 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMA 82 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHHH
T ss_pred CEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHHH
Confidence 6899999999999999999999999999988643100 0010 1
Q ss_pred --------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 177 --------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 177 --------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+...+.+.+++.||+++.+..+. + + .. ...+.+ +|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~-~~-~~~v~~-~g~~~~~d~lviAtG~~p~~ 143 (455)
T 2yqu_A 83 HKDKVVQANTQGVEFLFKKNGIARHQGTARF-L--S-ER-KVLVEE-TGEELEARYILIATGSAPLI 143 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-S--S-SS-EEEETT-TCCEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--c-CC-eEEEee-CCEEEEecEEEECCCCCCCC
Confidence 11123455677899999887432 2 2 22 223434 67789999999999998864
No 215
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.96 E-value=2.4e-05 Score=77.77 Aligned_cols=93 Identities=19% Similarity=0.288 Sum_probs=66.3
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc----------------------------------ccCH-HH-
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------LFTP-SL- 177 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------~~~~-~~- 177 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+ +-.. ..+. .+
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLG 85 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHHH
Confidence 579999999999999999999999999999875 1000 0010 01
Q ss_pred ----------HHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 178 ----------AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 178 ----------~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
...+...+++.||+++.++.+. +. .. .+.+. |+++.+|.+|+|+|.+|..
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~---~v~v~-g~~~~~d~lViATGs~p~~ 145 (464)
T 2eq6_A 86 GWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-VG---PK---EVEVG-GERYGAKSLILATGSEPLE 145 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-EE---TT---EEEET-TEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cc---CC---EEEEc-cEEEEeCEEEEcCCCCCCC
Confidence 0112345677899999987543 43 12 45555 6789999999999998864
No 216
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.95 E-value=1.5e-05 Score=77.76 Aligned_cols=106 Identities=21% Similarity=0.206 Sum_probs=73.4
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCC------------cc-cccccC------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPEN------------HL-LQRLFT------------------------ 174 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~------------~~-l~~~~~------------------------ 174 (414)
.+|+|||+|.+|+-+|..|+++ |.+|+|+++.. .+ .+..+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKTL 116 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCCC
Confidence 5799999999999999999999 99999999753 12 000000
Q ss_pred -------------------------------------------------------HHHHHHHHHHHHhCCcEEEcCceEE
Q 014997 175 -------------------------------------------------------PSLAQRYEQLYQQNGVKFVKGASIK 199 (414)
Q Consensus 175 -------------------------------------------------------~~~~~~~~~~l~~~gv~i~~~~~v~ 199 (414)
..+...+.+.+++.|++++.+++|+
T Consensus 117 ~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~ 196 (405)
T 3c4n_A 117 EVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAE 196 (405)
T ss_dssp CEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEE
T ss_pred cEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 1244556667788899999999998
Q ss_pred ---------EEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhh-hcCC
Q 014997 200 ---------NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE-RVGL 243 (414)
Q Consensus 200 ---------~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~-~~gl 243 (414)
++..+ ++.+ .|.+.+| ++.||.||+|+|.... .+++ ..++
T Consensus 197 ~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s~-~l~~~~~g~ 246 (405)
T 3c4n_A 197 LVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAGP-ALVEQGLGL 246 (405)
T ss_dssp EETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGHH-HHHHHHHCC
T ss_pred eccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccHH-HHHHHhcCC
Confidence 77643 3333 5666666 7999999999998643 3444 4443
No 217
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.95 E-value=6.6e-05 Score=72.74 Aligned_cols=59 Identities=25% Similarity=0.400 Sum_probs=42.3
Q ss_pred HHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 180 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 180 ~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
.+.+.+++.|++++.++.|+++..+++ .+ .+.+++| ++.+|.||+|+|.... .+++..+
T Consensus 158 ~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v-~v~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 216 (397)
T 2oln_A 158 ALFTLAQAAGATLRAGETVTELVPDAD-GV-SVTTDRG-TYRAGKVVLACGPYTN-DLLEPLG 216 (397)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEESSC-EEEEEEEEECCGGGHH-HHHGGGT
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEcCC-eE-EEEECCC-EEEcCEEEEcCCcChH-HHhhhcC
Confidence 344556778999999999999986533 33 4666665 7999999999997643 3444444
No 218
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.94 E-value=3.8e-06 Score=83.49 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=69.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCC--CcEEEEeeCCccc--------ccc-cCHHHHHHHHHHHHhCCcEEEcCceEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLL--------QRL-FTPSLAQRYEQLYQQNGVKFVKGASIKN 200 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 200 (414)
..++|+|||+|+.|+.+|..|+++| .+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3578999999999999999999988 9999999987654 111 123566677788888999999987652
Q ss_pred EEecCCCcEEEEEeCCCcEEecCEEEEccCCcC
Q 014997 201 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 201 i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 233 (414)
. .|.+.+. .+.+|.||+|+|..|
T Consensus 84 ------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred ------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1233332 478999999999885
No 219
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.94 E-value=2.7e-05 Score=77.72 Aligned_cols=98 Identities=23% Similarity=0.321 Sum_probs=68.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc-----------------------------------------c
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-----------------------------------------R 171 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------------------------------~ 171 (414)
..+|+|||||+.|+.+|..|++.|.+|+++++.. +.. .
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 3579999999999999999999999999999863 100 0
Q ss_pred ccCH------------HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCc--EEecCEEEEccCCcCCCh
Q 014997 172 LFTP------------SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 172 ~~~~------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 236 (414)
.++. .+...+.+.+++.||+++.+. +..+. ... ..+.+.+|+ ++.+|.+|+|+|.+|...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~---~~~-~~v~~~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFNK---DGN-VEVQKRDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEECT---TSC-EEEEESSSCCEEEEEEEEEECCCEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEee---CCE-EEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 0000 111223455677899999874 44442 222 356667776 899999999999988644
No 220
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.93 E-value=3.2e-05 Score=76.84 Aligned_cols=96 Identities=24% Similarity=0.285 Sum_probs=68.3
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc-----------------------------------cCH---
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-----------------------------------FTP--- 175 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------------------------~~~--- 175 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.. +...+ ++.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIA 82 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHH
Confidence 369999999999999999999999999999872 21000 000
Q ss_pred ---------HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCCC
Q 014997 176 ---------SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTV 235 (414)
Q Consensus 176 ---------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~ 235 (414)
.+...+.+.+++.||+++.++.+. + + .. ...+.+.+| +++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d-~~-~v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 83 YDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--D-AN-TLLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--S-SS-EEEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--c-CC-eEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 011223456677899999887543 2 2 22 235667777 689999999999998864
No 221
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.93 E-value=4.6e-05 Score=76.26 Aligned_cols=97 Identities=20% Similarity=0.272 Sum_probs=67.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc---------------------------c---------C--
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL---------------------------F---------T-- 174 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------~---------~-- 174 (414)
..+|+|||||+.|+.+|..|+++|.+|+++++.+.+-..+ + +
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 104 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQ 104 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHH
Confidence 3689999999999999999999999999999865431100 0 0
Q ss_pred ----------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCC
Q 014997 175 ----------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPT 234 (414)
Q Consensus 175 ----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~ 234 (414)
..+...+...+++.+|+++.+.... + +.....+...+| .++.+|.+|+|+|.+|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~----~~~~~~v~~~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 105 KMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV-L----GQGKVSVTNEKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-C----SSSEEEEECTTSCEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-e----cCCEEEEEeCCCceEEEEeCEEEEccCCCCC
Confidence 0111223445677899998875321 2 122235666777 57999999999999874
No 222
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=3.4e-05 Score=76.59 Aligned_cols=93 Identities=19% Similarity=0.291 Sum_probs=66.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-------------------------------cc-------CH
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------------------------LF-------TP 175 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~~-------~~ 175 (414)
.+++|||+|+.|+.+|..|++.|.+|+++++. .+... .+ +.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLDI 84 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccCH
Confidence 57999999999999999999999999999984 32100 00 00
Q ss_pred -HH-----------HHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCC
Q 014997 176 -SL-----------AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 176 -~~-----------~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 235 (414)
.+ ...+.+.+++.||+++.++.+. +. .. .+.+++ +++.+|.+|+|+|.+|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~---~~---~v~v~~-~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 85 GQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD---GK---QVEVDG-QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE---TT---EEEETT-EEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc---CC---EEEEee-EEEEeCEEEEeCCCCCCC
Confidence 11 1112356678899999987543 32 12 456655 679999999999998863
No 223
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.93 E-value=1.7e-05 Score=78.79 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=66.4
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------ccC----
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----------------------------------LFT---- 174 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~---- 174 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.. +-.. .++
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 84 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKL 84 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHH
Confidence 479999999999999999999999999999842 1100 001
Q ss_pred --------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe-CCCcEEecCEEEEccCCcCC
Q 014997 175 --------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 175 --------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~-~~g~~i~~D~vi~a~G~~p~ 234 (414)
..+...+.+.+++.|++++.+. +..+. .. .+.+ .+++.+.+|.+|+|+|.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~---~~---~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 85 VAAKEQEIARLEGLYRKGLANAGAEILDTR-AELAG---PN---TVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEESS---SS---EEEETTTTEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee---CC---EEEEecCCeEEEeCEEEEecCCCcc
Confidence 0222334555677799999873 33332 22 4555 57788999999999999886
No 224
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.92 E-value=6.1e-05 Score=80.42 Aligned_cols=62 Identities=26% Similarity=0.347 Sum_probs=46.3
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCChhhhhcC
Q 014997 178 AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 178 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
...+.+.+++.|++++.++.|+++... ++.+..|.+.+| ++.||.||+|+|.... .+++..|
T Consensus 154 ~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~-~l~~~~g 215 (830)
T 1pj5_A 154 VQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWGA-KIGAMIG 215 (830)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGHH-HHHHTTT
T ss_pred HHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccchH-HHHHHhC
Confidence 344566678889999999999999864 455556778877 7999999999998652 3333333
No 225
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.92 E-value=4.4e-06 Score=91.13 Aligned_cols=93 Identities=20% Similarity=0.264 Sum_probs=70.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCCcccc--------cccCHHHHHHHHHHHHhCCcEEEcCceEEEEEe
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ--------RLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 203 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~l~--------~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 203 (414)
+++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. ..++.+...+..+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999998 7999998765421 113445556666788999999999886621
Q ss_pred cCCCcEEEEEeCCCcEEecCEEEEccCC-cCC
Q 014997 204 GSDGRVAAVKLEDGSTIDADTIVIGIGA-KPT 234 (414)
Q Consensus 204 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~-~p~ 234 (414)
. .+.++++.++.+|.||+|+|. +|.
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCC
Confidence 1 233444555789999999998 475
No 226
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.91 E-value=0.00011 Score=71.83 Aligned_cols=50 Identities=22% Similarity=0.408 Sum_probs=39.8
Q ss_pred HHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcC
Q 014997 182 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 182 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 233 (414)
.+.+++.|++|++++.|++|..+ ++.+..|.++ |+++.||.||+++|...
T Consensus 203 ~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 203 ETVISANGGKIHTGQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHH
T ss_pred HHHHHHcCCEEEECCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHH
Confidence 34556789999999999999865 4566557765 77899999999998754
No 227
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.91 E-value=1.5e-05 Score=80.15 Aligned_cols=95 Identities=22% Similarity=0.385 Sum_probs=59.9
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc----------------------------------ccC-----
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------LFT----- 174 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------~~~----- 174 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+ +... .++
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 81 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLV 81 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHHH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHHH
Confidence 469999999999999999999999999999874 2000 000
Q ss_pred -------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC-------------CcEEecCEEEEccCCcCC
Q 014997 175 -------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED-------------GSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 175 -------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~-------------g~~i~~D~vi~a~G~~p~ 234 (414)
..+...+.+.+++.||+++.++.+ .+.. . .+.+.+ ++++.+|.+|+|+|.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~id~---~---~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~ 154 (500)
T 1onf_A 82 ERRDKYIQRLNNIYRQNLSKDKVDLYEGTAS-FLSE---N---RILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCCC-CC--------------------------------CBSSEEECCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-EeeC---C---EEEEEeccccccccccCCCceEEEeCEEEECCCCCCC
Confidence 111122345567889999988632 2321 1 233322 567999999999999887
Q ss_pred Ch
Q 014997 235 VS 236 (414)
Q Consensus 235 ~~ 236 (414)
..
T Consensus 155 ~p 156 (500)
T 1onf_A 155 FP 156 (500)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 228
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.91 E-value=9.4e-05 Score=74.33 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=45.2
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 179 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 179 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
..+.+.+++.|++++.+ +|+++..++++.+..|.+.+|+++.+|.||.|.|....
T Consensus 177 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 34555566789999999 89999876667777888999988999999999998754
No 229
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.90 E-value=2e-05 Score=78.71 Aligned_cols=97 Identities=24% Similarity=0.253 Sum_probs=67.2
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------ccCH-H-
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----------------------------------LFTP-S- 176 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~~-~- 176 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-.. .++. .
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~~ 86 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDML 86 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 47999999999999999999999999999986543100 0010 0
Q ss_pred ----------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC------------cEEecCEEEEccCCcCC
Q 014997 177 ----------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG------------STIDADTIVIGIGAKPT 234 (414)
Q Consensus 177 ----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g------------~~i~~D~vi~a~G~~p~ 234 (414)
+...+.+.+++.||+++.++.+. +. .+. ..+.+.+| .++.+|.+|+|+|.+|.
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~~-v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 87 RAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LD---PHH-LEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EE---TTE-EEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-cc---CCE-EEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 11123455677899999887543 22 222 24444455 57999999999999886
Q ss_pred C
Q 014997 235 V 235 (414)
Q Consensus 235 ~ 235 (414)
.
T Consensus 162 ~ 162 (482)
T 1ojt_A 162 K 162 (482)
T ss_dssp C
T ss_pred C
Confidence 4
No 230
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.89 E-value=5.9e-05 Score=75.64 Aligned_cols=101 Identities=21% Similarity=0.303 Sum_probs=70.8
Q ss_pred CeEEEECCChHHHHHHHHHHhC---CCcEEEEeeCCccccc----------------------------c---------c
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQR----------------------------L---------F 173 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~---g~~Vtlv~~~~~~l~~----------------------------~---------~ 173 (414)
.+|+|||||+.|+.+|..|+++ |.+|+++++.+ +-.. . .
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 4699999999999999999999 99999999875 2000 0 0
Q ss_pred CH-H-----------HHHHHHHHHHhCCcEEEcCceEEEEEecC--CCcEEEEEeCCCc--EEecCEEEEccCCcCCCh
Q 014997 174 TP-S-----------LAQRYEQLYQQNGVKFVKGASIKNLEAGS--DGRVAAVKLEDGS--TIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 174 ~~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~--~~~~~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 236 (414)
+. . +...+.+.+++.||+++.++ +..+.... ++....+.+.+|+ .+.+|.+|+|+|.+|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 10 1 12224566788899999986 55553210 0123356667776 799999999999988643
No 231
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.88 E-value=8e-05 Score=75.23 Aligned_cols=55 Identities=16% Similarity=0.266 Sum_probs=43.9
Q ss_pred HHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 179 QRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 179 ~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
+.+.+.+++ .|++++.+ +|+++..++++.+..|.+.+|.++.+|.||.|.|....
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 334455566 89999999 59999876566666788888878999999999999764
No 232
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.88 E-value=3.4e-06 Score=83.71 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=67.9
Q ss_pred CCeEEEECCChHHHHHHHHHHh-C------CCcEEEEeeCCccccc---------ccCHHHHHHHHHHHHhCCcEEEcCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVG-W------KLDTTIIFPENHLLQR---------LFTPSLAQRYEQLYQQNGVKFVKGA 196 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~-~------g~~Vtlv~~~~~~l~~---------~~~~~~~~~~~~~l~~~gv~i~~~~ 196 (414)
.++|+|||+|+.|+.+|..|++ . |.+|+++++.+.+... ....++...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 8999999998765321 1223566677778888999999885
Q ss_pred eEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 197 SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 197 ~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
.+ + . .|.++++ .+.+|.||+|+|..
T Consensus 83 ~v-----~--~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV-----G--E---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB-----T--T---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE-----C--C---EEEECCC-eEeCCEEEEeeCCC
Confidence 43 1 1 2344444 47899999999997
No 233
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.87 E-value=6.1e-06 Score=86.30 Aligned_cols=88 Identities=19% Similarity=0.185 Sum_probs=67.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc----------ccCHHHHHHHHHHHHhC-CcEEEcCceEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------LFTPSLAQRYEQLYQQN-GVKFVKGASIKNL 201 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~~~~~l~~~-gv~i~~~~~v~~i 201 (414)
.++|+|||||+.|+.+|..|+++|.+|+++++.+.+... .....+..++.+.+++. ||+++.++.++
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-- 468 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT-- 468 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec--
Confidence 468999999999999999999999999999997644211 01134566777778887 99999886432
Q ss_pred EecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 202 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 202 ~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
..++.++.+|.+|+|+|..|.
T Consensus 469 ------------~~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 ------------GDDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp ------------HHHHHHTTCCEEEECCCEEEC
T ss_pred ------------HHHHhhcCCCEEEEcCCCccc
Confidence 123345789999999999854
No 234
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.87 E-value=3.3e-05 Score=77.38 Aligned_cols=98 Identities=21% Similarity=0.294 Sum_probs=65.9
Q ss_pred CeEEEECCChHHHHHHHHHHh-CCCcEEEEee--------CCccccc---------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFP--------ENHLLQR--------------------------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~-~g~~Vtlv~~--------~~~~l~~--------------------------------- 171 (414)
.+|+|||||+.|+.+|..|++ .|.+|+++++ ...+-..
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~ 83 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELD 83 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcccC
Confidence 479999999999999999999 9999999992 2222100
Q ss_pred ----ccC-HH-----------HHHHHHHHHHhC-CcEEEcCceEEEEEecCCCcEEEEEe---CCC---cEEecCEEEEc
Q 014997 172 ----LFT-PS-----------LAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKL---EDG---STIDADTIVIG 228 (414)
Q Consensus 172 ----~~~-~~-----------~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~---~~g---~~i~~D~vi~a 228 (414)
.++ +. +...+.+.+++. ||+++.+. +..+.. .. ..+.. .+| +++.+|.+|+|
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~~---~~-v~v~~~~~~~g~~~~~~~~d~lviA 158 (490)
T 1fec_A 84 RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQDN---HT-VLVRESADPNSAVLETLDTEYILLA 158 (490)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEET---TE-EEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEeeC---CE-EEEEeeccCCCCceEEEEcCEEEEe
Confidence 001 01 112234456677 99999886 555542 21 22332 366 68999999999
Q ss_pred cCCcCCCh
Q 014997 229 IGAKPTVS 236 (414)
Q Consensus 229 ~G~~p~~~ 236 (414)
+|.+|...
T Consensus 159 tGs~p~~p 166 (490)
T 1fec_A 159 TGSWPQHL 166 (490)
T ss_dssp CCEEECCC
T ss_pred CCCCCCCC
Confidence 99988643
No 235
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.87 E-value=5.5e-05 Score=81.90 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=71.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc-------c----CHHHHHHHHHHHHhC-CcEEEcCceEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-------F----TPSLAQRYEQLYQQN-GVKFVKGASIKN 200 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~----~~~~~~~~~~~l~~~-gv~i~~~~~v~~ 200 (414)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.... + ..++...+.+.+.+. +|+++.++.|..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 3579999999999999999999999999999876542111 1 123334445556664 999999999988
Q ss_pred EEecCCCcEEEEEe---------------CCCcEEecCEEEEccCCcCCC
Q 014997 201 LEAGSDGRVAAVKL---------------EDGSTIDADTIVIGIGAKPTV 235 (414)
Q Consensus 201 i~~~~~~~~~~v~~---------------~~g~~i~~D~vi~a~G~~p~~ 235 (414)
+.. ++.+..+.. .++.++.+|.+|+|+|..|..
T Consensus 208 i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 208 SYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred eec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 863 222222211 112368999999999998753
No 236
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.85 E-value=3.1e-05 Score=77.61 Aligned_cols=96 Identities=22% Similarity=0.318 Sum_probs=65.2
Q ss_pred CeEEEECCChHHHHHHHHHHh-CCCcEEEEee--------CCccccc---------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFP--------ENHLLQR--------------------------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~-~g~~Vtlv~~--------~~~~l~~--------------------------------- 171 (414)
.+|+|||||+.|+.+|..|++ .|.+|+++++ ...+-..
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~ 87 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFD 87 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcccC
Confidence 579999999999999999999 9999999992 2222100
Q ss_pred ----ccC-HHH-----------HHHHHHHHHhC-CcEEEcCceEEEEEecCCCcEEEEEeC---C-----CcEEecCEEE
Q 014997 172 ----LFT-PSL-----------AQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLE---D-----GSTIDADTIV 226 (414)
Q Consensus 172 ----~~~-~~~-----------~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~---~-----g~~i~~D~vi 226 (414)
.++ ..+ ...+...+++. ||+++.+. +..+.. . .|.+. + ++++.+|.+|
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~~---~---~v~v~~~~~~~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 88 GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLESK---N---VVVVRETADPKSAVKERLQADHIL 160 (495)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEET---T---EEEEESSSSTTSCEEEEEEEEEEE
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEeeC---C---EEEEeecCCccCCCCeEEEcCEEE
Confidence 001 011 11223345677 99999885 445532 2 34443 4 6689999999
Q ss_pred EccCCcCCCh
Q 014997 227 IGIGAKPTVS 236 (414)
Q Consensus 227 ~a~G~~p~~~ 236 (414)
+|+|.+|...
T Consensus 161 iATGs~p~~p 170 (495)
T 2wpf_A 161 LATGSWPQMP 170 (495)
T ss_dssp ECCCEEECCC
T ss_pred EeCCCCcCCC
Confidence 9999988643
No 237
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.83 E-value=0.00017 Score=70.53 Aligned_cols=48 Identities=15% Similarity=0.290 Sum_probs=38.0
Q ss_pred HHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 183 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 183 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
+.+++.|++|++++.|++|..+ ++.+ | ..+|+++.||.||+++|....
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHCCCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHH
Confidence 4456789999999999999864 4444 4 567889999999999997643
No 238
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.79 E-value=2.6e-05 Score=81.20 Aligned_cols=87 Identities=17% Similarity=0.288 Sum_probs=65.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----ccC-----HHHHHHHHHHHHhCCcEEEcCceEEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----LFT-----PSLAQRYEQLYQQNGVKFVKGASIKNLE 202 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-----~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 202 (414)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... .++ .+....+.+.+++.||+++.++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 468999999999999999999999999999987654211 111 13344566777888999998875421
Q ss_pred ecCCCcEEEEEeCCCcEE-ecCEEEEccCCcCCCh
Q 014997 203 AGSDGRVAAVKLEDGSTI-DADTIVIGIGAKPTVS 236 (414)
Q Consensus 203 ~~~~~~~~~v~~~~g~~i-~~D~vi~a~G~~p~~~ 236 (414)
..+ .+|.+|+|+|.+|...
T Consensus 451 ---------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ---------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ---------------SSSCCSSEEEECCCEEECCC
T ss_pred ---------------HHhhcCCEEEEccCCCcCCC
Confidence 113 8999999999988743
No 239
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.77 E-value=0.00019 Score=72.02 Aligned_cols=55 Identities=13% Similarity=0.137 Sum_probs=41.8
Q ss_pred HHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe---CCCc--EEecCEEEEccCCcCC
Q 014997 178 AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKPT 234 (414)
Q Consensus 178 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~---~~g~--~i~~D~vi~a~G~~p~ 234 (414)
...+.+.+++.|++++.+++|+++..++ .+..|.+ .+|+ ++.+|.||.|+|....
T Consensus 152 ~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 152 VLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 3445666778899999999999998643 4445666 3565 7999999999997653
No 240
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.76 E-value=4.3e-05 Score=76.23 Aligned_cols=97 Identities=19% Similarity=0.317 Sum_probs=66.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-----------------------------------ccC---
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----------------------------------LFT--- 174 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~--- 174 (414)
..+|+|||+|+.|+.+|..|+++|.+|+++++.. +-.. .++
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 98 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRV 98 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 3689999999999999999999999999999763 2000 000
Q ss_pred ---------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 175 ---------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 175 ---------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
..+...+...+++.||+++.+. +..+. .... .+. .+++++.+|.+|+|+|.+|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~--~~~~--~v~-~~g~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 99 IKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS--DPKP--TIE-VSGKKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS--CSSC--EEE-ETTEEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee--CCeE--EEE-ECCEEEEeeEEEEccCCCCCCC
Confidence 1122334455677899999875 22221 1111 334 4667899999999999988643
No 241
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.73 E-value=9.1e-05 Score=73.04 Aligned_cols=62 Identities=24% Similarity=0.410 Sum_probs=45.6
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEec--------------CCCcEEEEEeCCCcEE--ecCEEEEccCCcCCChhhhhcC
Q 014997 179 QRYEQLYQQNGVKFVKGASIKNLEAG--------------SDGRVAAVKLEDGSTI--DADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 179 ~~~~~~l~~~gv~i~~~~~v~~i~~~--------------~~~~~~~v~~~~g~~i--~~D~vi~a~G~~p~~~~l~~~g 242 (414)
..+.+.+++.|++++.+++|+++..+ +++.+..|.+.+| ++ .||.||+|+|.... .++...+
T Consensus 185 ~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~-~l~~~~g 262 (448)
T 3axb_A 185 DYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN-RLLNPLG 262 (448)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH-HHHGGGT
T ss_pred HHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH-HHHHHcC
Confidence 34556667889999999999999851 2445556788888 58 99999999997643 3444443
No 242
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.70 E-value=0.00039 Score=71.07 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=39.4
Q ss_pred HHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEe---CCCc--EEecCEEEEccCCc
Q 014997 181 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 232 (414)
Q Consensus 181 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~---~~g~--~i~~D~vi~a~G~~ 232 (414)
+.+.+++.||+++.++.++++..++++++..|.. .+|+ .+.++.||+|+|..
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 4445567799999999999998644566666654 4665 68999999999974
No 243
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.70 E-value=0.00011 Score=73.30 Aligned_cols=96 Identities=25% Similarity=0.379 Sum_probs=66.4
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc------cc----------------------------cc--------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH------LL----------------------------QR-------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~------~l----------------------------~~-------- 171 (414)
-+|+|||+|+.|+.+|..|++.|.+|+++++.+. +- ..
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~ 83 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEV 83 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 4799999999999999999999999999998751 00 00
Q ss_pred ccC------------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCC
Q 014997 172 LFT------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 ~~~------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~ 234 (414)
.++ ..+...+...+++.||+++.+.... + + ... ..+...+| .++.+|.+|+|+|.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~--~-~~~-~~v~~~~g~~~~~~~d~lvlAtG~~p~ 155 (476)
T 3lad_A 84 AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL-L--A-GKK-VEVTAADGSSQVLDTENVILASGSKPV 155 (476)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE-C--S-TTC-EEEECTTSCEEEECCSCEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--c-CCE-EEEEcCCCceEEEEcCEEEEcCCCCCC
Confidence 000 0111223345667799999876332 2 2 222 35666777 57999999999999886
No 244
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.67 E-value=1.5e-05 Score=83.83 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=59.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccc-----cC-----HHHHHHHHHHHHh------CCcEEEcCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-----FT-----PSLAQRYEQLYQQ------NGVKFVKGA 196 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----~~-----~~~~~~~~~~l~~------~gv~i~~~~ 196 (414)
.++|+|||||+.|+.+|..|+++|.+|+|+++.+.+.... ++ ....+++.+.++. .++++..+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~ 468 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK 468 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe
Confidence 4689999999999999999999999999999987542110 00 1223333333332 255554432
Q ss_pred eEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 197 SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 197 ~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
. +.++++..+.+|.||+|+|..|.
T Consensus 469 ~--------------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 469 P--------------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp C--------------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred E--------------EehhhccccCCCEEEEcCCCCcc
Confidence 1 22334446889999999999854
No 245
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.66 E-value=0.00022 Score=71.03 Aligned_cols=98 Identities=18% Similarity=0.293 Sum_probs=69.6
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc-------------cccc-----------------------------
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-------------LQRL----------------------------- 172 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~-------------l~~~----------------------------- 172 (414)
.|+|||+|..|+-+|..|++.|.+|+++++...- +...
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 4899999999999999999999999999986100 0000
Q ss_pred --------------c----------------------CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeC-
Q 014997 173 --------------F----------------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE- 215 (414)
Q Consensus 173 --------------~----------------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~- 215 (414)
+ +..+...+.+.+++.||+++.++.+ ++..+ ++.+..+...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEe
Confidence 0 0123344555567789999999999 98654 4555555543
Q ss_pred CCcEEecCEEEEccCCcCC
Q 014997 216 DGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 216 ~g~~i~~D~vi~a~G~~p~ 234 (414)
++.++.+|.||+|+|..+.
T Consensus 159 ~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TEEECCCSEEEECCCCCGG
T ss_pred CCCeEEeeeEEECCCCCcc
Confidence 2235789999999998763
No 246
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.66 E-value=0.0002 Score=72.15 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=66.2
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC--------cccc-----------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--------HLLQ----------------------------------- 170 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~--------~~l~----------------------------------- 170 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+ .+-.
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 112 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 112 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 479999999999999999999999999999743 1100
Q ss_pred -cccC-H-----------HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCc--EEecCEEEEccCCcCCC
Q 014997 171 -RLFT-P-----------SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTV 235 (414)
Q Consensus 171 -~~~~-~-----------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~--~i~~D~vi~a~G~~p~~ 235 (414)
..++ + .+...+...+++.||+++.+. ...+.. . ...+...+|+ ++.+|.+|+|||.+|..
T Consensus 113 ~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d~---~-~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 113 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIGP---H-RIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEET---T-EEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEeeC---C-EEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 0001 0 011122345677899998765 333331 2 2345566664 79999999999998864
Q ss_pred h
Q 014997 236 S 236 (414)
Q Consensus 236 ~ 236 (414)
.
T Consensus 188 p 188 (519)
T 3qfa_A 188 L 188 (519)
T ss_dssp C
T ss_pred C
Confidence 3
No 247
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.62 E-value=0.00025 Score=72.21 Aligned_cols=61 Identities=18% Similarity=0.147 Sum_probs=43.4
Q ss_pred HHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC---C--cEEecCEEEEccCCcCCChhhhhcC
Q 014997 180 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKPTVSPFERVG 242 (414)
Q Consensus 180 ~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~---g--~~i~~D~vi~a~G~~p~~~~l~~~g 242 (414)
.+.+.+++.|++++.+++|+++..+ ++.+..|.+.+ | .++.||.||.|+|.... .+++..|
T Consensus 175 ~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~-~l~~~~g 240 (561)
T 3da1_A 175 EIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVD-TLREKDR 240 (561)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHH-HHHHTTT
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcchH-HHHHhcC
Confidence 3445567889999999999999864 55555666643 3 47999999999997542 3344344
No 248
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.59 E-value=4.2e-05 Score=73.86 Aligned_cols=88 Identities=15% Similarity=0.185 Sum_probs=67.1
Q ss_pred CeEEEECCChHHHHHHHHHHhC--CCcEEEEeeCCcc----------------------c-cc-----------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL----------------------L-QR----------------- 171 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~----------------------l-~~----------------- 171 (414)
.+|+|||||+.|+.+|..|++. |.+|+|+++.+.+ . ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3699999999999999999998 9999999987543 0 00
Q ss_pred --------------ccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 172 --------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 172 --------------~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
....++.+.+.+.+++.|++++++++|++++.. +.+.+|.||.|.|....
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 001345666777778889999999988777421 12579999999997653
No 249
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.54 E-value=0.00033 Score=72.43 Aligned_cols=100 Identities=19% Similarity=0.266 Sum_probs=73.4
Q ss_pred CeEEEECCChHHHHHHHHHHh-CCCcEEEEeeCCccc--------------------------------------c----
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPENHLL--------------------------------------Q---- 170 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l--------------------------------------~---- 170 (414)
.+|+|||+|++|+-+|..|++ .|.+|+|+++.+.+. .
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 479999999999999999999 999999999763210 0
Q ss_pred --c---------------------ccC-HHHHHHHHHHHHhCCc--EEEcCceEEEEEecCC--CcEEEEEeC------C
Q 014997 171 --R---------------------LFT-PSLAQRYEQLYQQNGV--KFVKGASIKNLEAGSD--GRVAAVKLE------D 216 (414)
Q Consensus 171 --~---------------------~~~-~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~--~~~~~v~~~------~ 216 (414)
. .++ ..+.+.+.+.+++.|+ +++.++++++++.+++ +....+.+. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 000 1345567777788876 9999999999986543 212244443 4
Q ss_pred C--cEEecCEEEEccCCcC
Q 014997 217 G--STIDADTIVIGIGAKP 233 (414)
Q Consensus 217 g--~~i~~D~vi~a~G~~p 233 (414)
| +++.+|.||.|.|...
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 5 4799999999999864
No 250
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.52 E-value=0.00037 Score=69.60 Aligned_cols=98 Identities=20% Similarity=0.215 Sum_probs=65.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC--------ccc------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--------HLL------------------------------------ 169 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~--------~~l------------------------------------ 169 (414)
-.|+|||+|+.|+.+|..|++.|.+|+++++.+ .+-
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 86 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQ 86 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 479999999999999999999999999998621 110
Q ss_pred ccccC-HH-----------HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCC--cEEecCEEEEccCCcCCC
Q 014997 170 QRLFT-PS-----------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTV 235 (414)
Q Consensus 170 ~~~~~-~~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~ 235 (414)
+..++ +. +...+...+++.||+++.+. +..+ +.....+...+| .++.+|.+|+|+|.+|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~----~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 87 PVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV----DEHTVRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES----SSSEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc----cCCeEEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 00011 00 11123345677899998764 2222 122235666676 479999999999998864
Q ss_pred h
Q 014997 236 S 236 (414)
Q Consensus 236 ~ 236 (414)
.
T Consensus 162 p 162 (488)
T 3dgz_A 162 P 162 (488)
T ss_dssp C
T ss_pred C
Confidence 3
No 251
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.47 E-value=0.00063 Score=69.77 Aligned_cols=98 Identities=18% Similarity=0.255 Sum_probs=70.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCC--CcEEEEeeCCccccc------------------------------c---------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQR------------------------------L--------- 172 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l~~------------------------------~--------- 172 (414)
-.|+|||+|..|+-+|..|++.| .+|+|+++.+..... .
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 36999999999999999999999 999999986321000 0
Q ss_pred ------------------c----------------------------CHHHHHHHHHHHHhCC-cEEEcCceEEEEEecC
Q 014997 173 ------------------F----------------------------TPSLAQRYEQLYQQNG-VKFVKGASIKNLEAGS 205 (414)
Q Consensus 173 ------------------~----------------------------~~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~~ 205 (414)
+ +..+...+.+.+++.| |+++.++.+.++..+
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~- 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD- 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-
Confidence 0 0122233444556677 999999999999754
Q ss_pred CCcEEEEE---eCCCc--EEecCEEEEccCCc
Q 014997 206 DGRVAAVK---LEDGS--TIDADTIVIGIGAK 232 (414)
Q Consensus 206 ~~~~~~v~---~~~g~--~i~~D~vi~a~G~~ 232 (414)
++.+..+. +.+|+ .+.++.||+|+|..
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 45555543 25776 69999999999963
No 252
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.45 E-value=0.00082 Score=68.14 Aligned_cols=96 Identities=18% Similarity=0.282 Sum_probs=68.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc-------------------------------------------
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 170 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 170 (414)
.+|+|||+|++|+-+|..|++.|.+|+|+++.+.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 4799999999999999999999999999998632200
Q ss_pred -c-c---c---------------------C-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCC---C--c
Q 014997 171 -R-L---F---------------------T-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--S 218 (414)
Q Consensus 171 -~-~---~---------------------~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~---g--~ 218 (414)
. . + + ..+.+.+.+.+++. +++++++++++.++++. .+++.+ | +
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v--~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHV--RATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCE--EEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEE--EEEEEECCCCCEE
Confidence 0 0 0 0 02334444555544 88999999998765543 344443 6 4
Q ss_pred EEecCEEEEccCCcCC
Q 014997 219 TIDADTIVIGIGAKPT 234 (414)
Q Consensus 219 ~i~~D~vi~a~G~~p~ 234 (414)
++.||.||.|.|....
T Consensus 182 ~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 182 AVHARYLVACDGASSP 197 (549)
T ss_dssp EEEEEEEEECCCTTCH
T ss_pred EEEeCEEEECCCCCcH
Confidence 7999999999998653
No 253
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.40 E-value=0.00067 Score=67.61 Aligned_cols=99 Identities=22% Similarity=0.277 Sum_probs=65.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC---C----c--c--------------------------------cc-
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE---N----H--L--------------------------------LQ- 170 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~---~----~--~--------------------------------l~- 170 (414)
..+|+|||+|+.|+.+|..|++.|.+|+++++. + . + +.
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 88 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNV 88 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 357999999999999999999999999999831 1 0 0 00
Q ss_pred ---cccCH-HH-----------HHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCc-EEecCEEEEccCCcCC
Q 014997 171 ---RLFTP-SL-----------AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPT 234 (414)
Q Consensus 171 ---~~~~~-~~-----------~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~-~i~~D~vi~a~G~~p~ 234 (414)
..++. .+ ...+...+++.+|+++.+.. .-+. .. ...+.+.+|+ ++.+|.+|+|+|.+|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a-~~~~---~~-~v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLG-SFVD---SH-TLLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-EEEE---TT-EEEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEcc---CC-EEEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 00110 11 11122346778999987643 2222 12 2356666774 7999999999999886
Q ss_pred Ch
Q 014997 235 VS 236 (414)
Q Consensus 235 ~~ 236 (414)
..
T Consensus 164 ~p 165 (483)
T 3dgh_A 164 YP 165 (483)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 254
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.36 E-value=0.00046 Score=69.01 Aligned_cols=33 Identities=24% Similarity=0.237 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999864
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.34 E-value=0.0011 Score=67.83 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=30.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEee
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP 164 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~ 164 (414)
..+|+|||+|+.|+.+|..|+++|.+|+++++
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 45899999999999999999999999999996
No 256
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.33 E-value=0.0021 Score=65.43 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
....|+|||||.+|+-+|..|+++|.+|+|+++.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~ 64 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQ 64 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4468999999999999999999999999999875
No 257
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.31 E-value=0.00059 Score=69.05 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
-.|+|||+|..|+-+|..|++ |.+|+|+++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 479999999999999999999 999999998753
No 258
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.29 E-value=0.00061 Score=70.12 Aligned_cols=56 Identities=14% Similarity=0.279 Sum_probs=44.4
Q ss_pred CcEEEcCceEEEEEecCC-CcEEEEEeC---CCc--EEecCEEEEccCCcCCChhhhhcCCc
Q 014997 189 GVKFVKGASIKNLEAGSD-GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLN 244 (414)
Q Consensus 189 gv~i~~~~~v~~i~~~~~-~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~~~gl~ 244 (414)
||++++++.|+++..+++ +++..|++. +|+ ++.+|.||+|+|..|+..+|..+|+.
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 789999999999986533 366677664 354 68999999999999998888777663
No 259
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.28 E-value=0.0017 Score=66.75 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
-.|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~ 50 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKL 50 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 37999999999999999999999999999976
No 260
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.26 E-value=0.00036 Score=69.82 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=37.0
Q ss_pred HHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCC
Q 014997 181 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 231 (414)
Q Consensus 181 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 231 (414)
+.+.+++.|+++++++.|++|..+ ++ .+++.+|+++.||.||+++..
T Consensus 228 l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 228 VANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCH
Confidence 333445678999999999999854 33 467899999999999998764
No 261
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.21 E-value=0.0018 Score=63.70 Aligned_cols=41 Identities=27% Similarity=0.510 Sum_probs=34.2
Q ss_pred cEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 190 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 190 v~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
+++++++.|++|+.++++ ..|.+.+|+++.||.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCHH
Confidence 589999999999876544 36888999889999999998753
No 262
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.18 E-value=0.0051 Score=62.77 Aligned_cols=85 Identities=16% Similarity=0.144 Sum_probs=58.7
Q ss_pred HHHH-cCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh
Q 014997 55 WYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 130 (414)
Q Consensus 55 ~~~~-~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 130 (414)
.+++ .|++++ +++|+.+..++. .|.+.+|..+.+|.||+|||+.+.. +..+ |.....
T Consensus 132 ~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~-~~~~-----G~~~~~------------ 192 (637)
T 2zxi_A 132 VCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG-VIYI-----GDKMIP------------ 192 (637)
T ss_dssp HHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC-EEEE-----TTEEEE------------
T ss_pred HHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC-ceec-----cceecC------------
Confidence 4455 499996 579999876544 3778889899999999999997653 2222 222211
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEee
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP 164 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~ 164 (414)
+.+ + |+.+++++|..|.+.|.+++.+..
T Consensus 193 --~Gr---~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 193 --GGR---L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp --CSB---T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred --CCC---C-CchhHHHHHHHHHhcCCceEEecC
Confidence 122 2 356789999999999988776543
No 263
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.11 E-value=0.0022 Score=66.52 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHh-----CCCcEEEEeeC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG-----WKLDTTIIFPE 165 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~-----~g~~Vtlv~~~ 165 (414)
..|+|||+|+.|+-+|..|++ .|.+|+|+++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 369999999999999999999 99999999976
No 264
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.09 E-value=0.0039 Score=64.49 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
-.|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 369999999999999999999999999998753
No 265
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.08 E-value=0.0021 Score=67.65 Aligned_cols=42 Identities=17% Similarity=0.365 Sum_probs=35.0
Q ss_pred CCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCC
Q 014997 188 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 231 (414)
Q Consensus 188 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 231 (414)
.|++|++++.|++|+.++++ + .|.+.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCH
Confidence 47899999999999876444 3 578889989999999999864
No 266
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.07 E-value=0.00048 Score=61.70 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=31.9
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
.|+|||+|++|+.+|..|++.|.+|+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999988765
No 267
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.84 E-value=0.0063 Score=62.83 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHH---h-CCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAV---G-WKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~---~-~g~~Vtlv~~~~ 166 (414)
-.|+|||+|..|+-+|..|+ + .|.+|+|+++.+
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 47999999999999999999 6 899999999764
No 268
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.76 E-value=0.0012 Score=56.12 Aligned_cols=48 Identities=17% Similarity=0.096 Sum_probs=39.8
Q ss_pred CCHhHHHHcCCeEEcCCcEEEEeCCC--CEEEeCCCcEEecCeEEEccCCCC
Q 014997 51 QTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 51 ~~~~~~~~~~i~~~~~~~V~~id~~~--~~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
...+.+++.|++++.+ +|++++.++ ..|++++| ++.+|+||+|||.++
T Consensus 61 ~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 61 RLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCC
Confidence 3456677889999998 999998654 36788888 799999999999986
No 269
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.75 E-value=0.0069 Score=61.10 Aligned_cols=31 Identities=29% Similarity=0.281 Sum_probs=29.2
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.++|||+|+.|+.+|..++++|.+|.+|++.
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G~kValIE~~ 74 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHGARVLLFDYV 74 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 6999999999999999999999999999853
No 270
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.62 E-value=0.002 Score=63.61 Aligned_cols=88 Identities=20% Similarity=0.137 Sum_probs=63.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 211 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~ 211 (414)
.+++|.|||.|.+|+.+|..|.++|.+|++.+..+.-. ++ ..+.|++.||+++.+....++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----NP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----CH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----Ch-----HHHHHHhCCCEEEECCChHHh----------
Confidence 57899999999999999999999999999998765211 11 234578889999876531100
Q ss_pred EEeCCCcEEecCEEEEccCCcCCChhh---hhcCCc
Q 014997 212 VKLEDGSTIDADTIVIGIGAKPTVSPF---ERVGLN 244 (414)
Q Consensus 212 v~~~~g~~i~~D~vi~a~G~~p~~~~l---~~~gl~ 244 (414)
+.+ .+|.||+++|..++.+.+ ++.|++
T Consensus 69 --~~~----~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 69 --LDE----DFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp --GGS----CEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred --hcC----CCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 010 179999999998877654 344554
No 271
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.51 E-value=0.013 Score=58.61 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=68.4
Q ss_pred eEEEECCChHHHHHHHHHHhCC--------------CcEEEEeeCCcc-------cc-----------------------
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWK--------------LDTTIIFPENHL-------LQ----------------------- 170 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~-------l~----------------------- 170 (414)
.|+|||+|+.|+-+|..|.+.| .....+++.+.+ ++
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999987643 245566665421 00
Q ss_pred ------------------ccc--CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCC------cEEEEEeCCC-----cE
Q 014997 171 ------------------RLF--TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG------RVAAVKLEDG-----ST 219 (414)
Q Consensus 171 ------------------~~~--~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~------~~~~v~~~~g-----~~ 219 (414)
..+ -.++.++++...++.+..+.++++|++++..+.+ ....|+..++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 000 1245566666666677788999999999754322 1234555433 36
Q ss_pred EecCEEEEccCCcCCCh
Q 014997 220 IDADTIVIGIGAKPTVS 236 (414)
Q Consensus 220 i~~D~vi~a~G~~p~~~ 236 (414)
+.|+.||+|+|..|+..
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999988754
No 272
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.49 E-value=0.0035 Score=59.05 Aligned_cols=80 Identities=23% Similarity=0.231 Sum_probs=58.6
Q ss_pred CCCeEEEECCChHHHH-HHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q 014997 132 KAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
..+++.|||.|-+|+. +|..|.++|.+|++.+..+. ++ ..+.|++.|++++.+.....
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~------~~-----~~~~L~~~gi~v~~g~~~~~---------- 61 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY------PP-----MSTQLEALGIDVYEGFDAAQ---------- 61 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC------TT-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC------cH-----HHHHHHhCCCEEECCCCHHH----------
Confidence 3578999999999997 88899999999999987653 11 23457788999886532100
Q ss_pred EEEeCCCcEEecCEEEEccCCcCCChhh
Q 014997 211 AVKLEDGSTIDADTIVIGIGAKPTVSPF 238 (414)
Q Consensus 211 ~v~~~~g~~i~~D~vi~a~G~~p~~~~l 238 (414)
+.. -.+|.||+++|..|+.+.+
T Consensus 62 ---l~~---~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 62 ---LDE---FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ---GGS---CCCSEEEECTTCCTTCHHH
T ss_pred ---cCC---CCCCEEEECCCcCCCCHHH
Confidence 100 1479999999999887654
No 273
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.48 E-value=0.0066 Score=62.75 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=29.4
Q ss_pred CeEEEECCChHHHHHHHHHHhC------CCcEEEEeeC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW------KLDTTIIFPE 165 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~------g~~Vtlv~~~ 165 (414)
-.|+|||+|..|+-+|..|++. |.+|+|+++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 4699999999999999999997 9999999974
No 274
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.46 E-value=0.0033 Score=64.43 Aligned_cols=85 Identities=11% Similarity=0.151 Sum_probs=55.9
Q ss_pred HHHH-cCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh
Q 014997 55 WYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 130 (414)
Q Consensus 55 ~~~~-~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 130 (414)
.+++ .|++++ +++|+.+..++. .|.+.+|.++.+|.||+|||+.+.. +.. +|....
T Consensus 133 ~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~-~~i-----~G~~~~------------- 192 (651)
T 3ces_A 133 ALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG-KIH-----IGLDNY------------- 192 (651)
T ss_dssp HHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC-EEE-----CC-----------------
T ss_pred HHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC-ccc-----cCcccC-------------
Confidence 4455 599995 469999976543 4678889889999999999998653 222 232211
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEee
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP 164 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~ 164 (414)
.+.+ +| |.+++++|..|.+.|.+|+.+..
T Consensus 193 -~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 193 -SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp --------------CCHHHHHHHTTTCCEEEECC
T ss_pred -CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 1222 56 78999999999999999988753
No 275
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.07 E-value=0.0091 Score=52.74 Aligned_cols=107 Identities=15% Similarity=0.232 Sum_probs=67.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 211 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~ 211 (414)
.+++|+|||||.+|...+..|.+.|.+|+++.+. +.++ +.+..++.+++++... +.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~----l~~l~~~~~i~~i~~~----~~--------- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAE----INEWEAKGQLRVKRKK----VG--------- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHH----HHHHHHTTSCEEECSC----CC---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHH----HHHHHHcCCcEEEECC----CC---------
Confidence 6899999999999999999999999999999753 2233 3344455567766432 11
Q ss_pred EEeCCCcEEecCEEEEccCCcCCChhhhhcCCcccCCCEEEcC-----CCCCCCCcEEEEcccc
Q 014997 212 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDG-----QFRTRMPGIFAIGDVA 270 (414)
Q Consensus 212 v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~g~i~vd~-----~~~t~~~~IyA~GD~a 270 (414)
.+..-.+|+||.|||.......+... .. .+|.||- .+.-..|-++--|+..
T Consensus 86 ----~~dL~~adLVIaAT~d~~~N~~I~~~---ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 86 ----EEDLLNVFFIVVATNDQAVNKFVKQH---IK-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp ----GGGSSSCSEEEECCCCTHHHHHHHHH---SC-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred ----HhHhCCCCEEEECCCCHHHHHHHHHH---Hh-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 11112489999999876433333222 11 3455542 2222457777667654
No 276
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.60 E-value=0.0096 Score=59.23 Aligned_cols=39 Identities=26% Similarity=0.339 Sum_probs=35.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 170 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 170 (414)
..++|+|||+|.+|+.+|..|++.|.+|+|+++.+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357899999999999999999999999999999876644
No 277
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.52 E-value=0.0099 Score=58.10 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999875
No 278
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=95.50 E-value=0.014 Score=56.74 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=33.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCC-CcEEEEeeCCcc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 168 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 168 (414)
+..+|+|||+|..|+-+|..|++.| .+|+|+++.+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4578999999999999999999999 899999988765
No 279
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=95.42 E-value=0.012 Score=58.07 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhCCC--cEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~--~Vtlv~~~~~ 167 (414)
++|+|||||.+|+-+|..|++.|. +|+|++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~ 38 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSER 38 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 589999999999999999999999 9999998643
No 280
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=95.37 E-value=0.015 Score=55.71 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
++|+|||||..|+++|..+++.|.+|+++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999764
No 281
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.36 E-value=0.032 Score=55.10 Aligned_cols=58 Identities=16% Similarity=0.315 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 175 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 175 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
.++.+.+.+.+++.|+++++++.|++|..++++++..|.+.+|+++.||.||+++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 3677888888999999999999999998645778888999999999999999999988
No 282
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=95.34 E-value=0.016 Score=57.39 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=34.8
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 169 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 169 (414)
.+..+|+|||+|..|+-+|..|++.|.+|+|+++.+++-
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 346789999999999999999999999999999887653
No 283
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.24 E-value=0.062 Score=50.18 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=54.8
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEc--CceEEEEEecCCCcEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--GASIKNLEAGSDGRVAA 211 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~--~~~v~~i~~~~~~~~~~ 211 (414)
.+|.|||+|.+|.-+|..|++.|.+|+++.|.+. +.+++.|+.+.. .... .+.. + .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~---------------~~i~~~Gl~~~~~~~g~~-~~~~-----~-~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY---------------ETVKAKGIRIRSATLGDY-TFRP-----A-A 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH---------------HHHHHHCEEEEETTTCCE-EECC-----S-C
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH---------------HHHHhCCcEEeecCCCcE-EEee-----e-e
Confidence 4799999999999999999999999999987530 234556766643 1111 0100 0 1
Q ss_pred EEeCCC-cEE-ecCEEEEccCCcCCChhhhhc
Q 014997 212 VKLEDG-STI-DADTIVIGIGAKPTVSPFERV 241 (414)
Q Consensus 212 v~~~~g-~~i-~~D~vi~a~G~~p~~~~l~~~ 241 (414)
+. .+- +.. ++|.||+|+......+.++..
T Consensus 61 ~~-~~~~~~~~~~DlVilavK~~~~~~~l~~l 91 (320)
T 3i83_A 61 VV-RSAAELETKPDCTLLCIKVVEGADRVGLL 91 (320)
T ss_dssp EE-SCGGGCSSCCSEEEECCCCCTTCCHHHHH
T ss_pred eE-CCHHHcCCCCCEEEEecCCCChHHHHHHH
Confidence 11 221 222 689999998887765555543
No 284
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=95.21 E-value=0.019 Score=54.99 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=33.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC-Ccc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHL 168 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~-~~~ 168 (414)
...+|+|||+|.+|+-+|..|.+.|.+|+|+++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3578999999999999999999999999999988 554
No 285
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.19 E-value=0.017 Score=56.91 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=35.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR 171 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 171 (414)
...+|+|||+|..|+-+|..|++.|.+|+++++++++-.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 3467999999999999999999999999999999876543
No 286
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.16 E-value=0.022 Score=54.03 Aligned_cols=33 Identities=30% Similarity=0.435 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
..+|+|||+|.+|+-+|..|+++|.+|+|+++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 468999999999999999999999999999975
No 287
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=95.15 E-value=0.018 Score=57.65 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCC-CcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 168 (414)
..+|+|||+|..|+-+|..|++.| .+|+|+++++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 358999999999999999999999 999999987654
No 288
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.11 E-value=0.022 Score=56.74 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=57.5
Q ss_pred cCCCeEEEECCChHHHH-HHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcE
Q 014997 131 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 209 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 209 (414)
...++|.|||-|-+|+- +|..|.++|.+|+..+.... + ..+.|++.|++++.+... + .
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-----~~~~l~~~gi~~~~g~~~-------~-~- 78 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------S-----VTQHLTALGAQIYFHHRP-------E-N- 78 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------H-----HHHHHHHTTCEEESSCCG-------G-G-
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC-------H-----HHHHHHHCCCEEECCCCH-------H-H-
Confidence 35689999999999996 89999999999999876531 1 124578889999876321 0 0
Q ss_pred EEEEeCCCcEEecCEEEEccCCcCCChhh
Q 014997 210 AAVKLEDGSTIDADTIVIGIGAKPTVSPF 238 (414)
Q Consensus 210 ~~v~~~~g~~i~~D~vi~a~G~~p~~~~l 238 (414)
+ -.+|.||+++|..++.+.+
T Consensus 79 ----~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ----V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp ----G-----TTCSEEEECTTSCTTCHHH
T ss_pred ----c-----CCCCEEEECCCCCCCCHHH
Confidence 1 1379999999998876653
No 289
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=95.08 E-value=0.018 Score=57.65 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
..+|+|||+|..|+-+|..|++.|.+|+|+++++++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 357999999999999999999999999999987543
No 290
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.02 E-value=0.021 Score=56.41 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
...+|+|||+|..|+-+|..|++.|.+|+|+++.+++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 4578999999999999999999999999999988654
No 291
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.87 E-value=0.066 Score=43.29 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=50.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 212 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v 212 (414)
.++++|+|.|..|..+|..|.+.|.+|+++++.+. .. +.+++.|+.++.+.. . +.. +
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~---------~~----~~~~~~g~~~i~gd~------~-~~~---~ 63 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT---------RV----DELRERGVRAVLGNA------A-NEE---I 63 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH---------HH----HHHHHTTCEEEESCT------T-SHH---H
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH---------HH----HHHHHcCCCEEECCC------C-CHH---H
Confidence 46899999999999999999999999999987542 11 234556777654321 0 000 0
Q ss_pred EeCCCcEEecCEEEEccCCcC
Q 014997 213 KLEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 213 ~~~~g~~i~~D~vi~a~G~~p 233 (414)
...-+ .-.+|.+|++++...
T Consensus 64 l~~a~-i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 64 MQLAH-LECAKWLILTIPNGY 83 (140)
T ss_dssp HHHTT-GGGCSEEEECCSCHH
T ss_pred HHhcC-cccCCEEEEECCChH
Confidence 00001 125899999988654
No 292
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.85 E-value=0.0089 Score=58.69 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=56.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 211 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~ 211 (414)
.+++|+|||.|.+|+.+|..|.++|.+|+..+....... . ..++ .|+++..+... . . .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~-----~------~~l~-~G~~~~~g~~~---~-~------~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG-----L------DKLP-EAVERHTGSLN---D-E------W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT-----G------GGSC-TTSCEEESSCC---H-H------H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch-----h------HHhh-CCCEEEECCCc---H-H------H
Confidence 468999999999999999999999999999987653211 1 2345 78888765421 0 0 0
Q ss_pred EEeCCCcEEecCEEEEccCCcCCChhhh
Q 014997 212 VKLEDGSTIDADTIVIGIGAKPTVSPFE 239 (414)
Q Consensus 212 v~~~~g~~i~~D~vi~a~G~~p~~~~l~ 239 (414)
+ . .+|.||+++|..|+.+.+.
T Consensus 62 --~----~-~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 62 --L----M-AADLIVASPGIALAHPSLS 82 (439)
T ss_dssp --H----H-TCSEEEECTTSCTTCHHHH
T ss_pred --h----c-cCCEEEeCCCCCCCCHHHH
Confidence 1 1 4799999999987665543
No 293
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=94.80 E-value=0.026 Score=55.23 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=32.1
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 57999999999999999999999999999987654
No 294
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=94.78 E-value=0.027 Score=55.99 Aligned_cols=37 Identities=30% Similarity=0.378 Sum_probs=33.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
+..+|+|||+|..|+-+|..|++.|.+|+|+++.+++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 3578999999999999999999999999999998765
No 295
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=94.74 E-value=0.058 Score=51.42 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=40.2
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
+.+.+.|++++.+++|++++.+. .|++.+|+++.+|+||.|+|.+.
T Consensus 115 ~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 115 NRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccH
Confidence 44566799999999999998866 89999998999999999999875
No 296
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=94.72 E-value=0.029 Score=53.94 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.7
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 169 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 169 (414)
.+|+|||+|.+|+.+|..|++.|.+|+++++++++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 479999999999999999999999999999886653
No 297
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.59 E-value=0.048 Score=44.93 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.3
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
..+++++|+|+|.+|..+|..|.+.|.+|+++.+.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4678999999999999999999999999999988654
No 298
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=94.54 E-value=0.034 Score=53.64 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
..+++|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 457999999999999999999999999999988665
No 299
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.52 E-value=0.033 Score=55.28 Aligned_cols=36 Identities=22% Similarity=0.449 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
..+|+|||+|..|+-+|..|++.|.+|+|+++.+++
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRI 74 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 368999999999999999999999999999988665
No 300
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=94.40 E-value=0.026 Score=53.26 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=29.7
Q ss_pred eEEEECCChHHHHHHHHHHhCC------CcEEEEeeCC
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWK------LDTTIIFPEN 166 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g------~~Vtlv~~~~ 166 (414)
+|+|||||.+|+-+|..|++.| .+|+|+++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999874
No 301
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=94.34 E-value=0.031 Score=54.02 Aligned_cols=36 Identities=19% Similarity=0.388 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhC-CCcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 168 (414)
..+|+|||+|..|+-+|..|++. |.+|+|+++++++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 46899999999999999999998 9999999988655
No 302
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=94.14 E-value=0.037 Score=52.77 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=31.3
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
+++|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987654
No 303
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=94.11 E-value=0.035 Score=54.70 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhCC--CcEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~ 167 (414)
.+|+|||+|.+|+-+|..|++.| .+|+++++.++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 58999999999999999999999 99999998644
No 304
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=94.00 E-value=0.051 Score=56.21 Aligned_cols=36 Identities=25% Similarity=0.518 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
.+++|+|||+|..|+.+|..|.+.|.+|+++++.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 457999999999999999999999999999998754
No 305
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=93.97 E-value=0.054 Score=57.49 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
.++|+|||+|..|+.+|..|.+.|.+|+|+++.++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 46899999999999999999999999999997754
No 306
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.89 E-value=0.082 Score=43.36 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 568999999999999999999999999999875
No 307
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.79 E-value=0.071 Score=53.47 Aligned_cols=79 Identities=20% Similarity=0.162 Sum_probs=57.5
Q ss_pred CCCeEEEECCChHHHH-HHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q 014997 132 KAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
+.+++.+||-|-+|+- +|..|.++|.+|+..+.... ++ ..+.|++.||+++.+.....
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~---------- 76 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAH---------- 76 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHH----------
Confidence 6789999999999997 58888999999999987542 11 23457788999886532100
Q ss_pred EEEeCCCcEEecCEEEEccCCcCCChhh
Q 014997 211 AVKLEDGSTIDADTIVIGIGAKPTVSPF 238 (414)
Q Consensus 211 ~v~~~~g~~i~~D~vi~a~G~~p~~~~l 238 (414)
+. -.+|+||+++|..++.+.+
T Consensus 77 ---~~----~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 77 ---LQ----PAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp ---GC----SCCSEEEECTTCCTTSHHH
T ss_pred ---cC----CCCCEEEECCCcCCCCHHH
Confidence 00 1479999999998877654
No 308
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.79 E-value=0.054 Score=55.32 Aligned_cols=48 Identities=17% Similarity=0.213 Sum_probs=35.4
Q ss_pred hHHHHcC-CeEEcCCcEEEEeCCCCE---EE---eCCCc--EEecCeEEEccCCCCC
Q 014997 54 EWYKEKG-IEMIYQDPVTSIDIEKQT---LI---TNSGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~~-i~~~~~~~V~~id~~~~~---V~---~~~g~--~~~yd~LviAtG~~~~ 101 (414)
+.+.+.+ |+++.+++|+++..+... |. +.+|+ .+.++.||+|||....
T Consensus 142 ~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 142 QTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 3445567 999999999998765442 22 25776 6899999999998643
No 309
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=93.72 E-value=0.094 Score=51.36 Aligned_cols=48 Identities=23% Similarity=0.473 Sum_probs=39.4
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
.+.+++.||+++.+++|+++..++. .|.+.+|+++.+|.||+|||...
T Consensus 141 ~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 141 LTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 3455678999999999999975443 47788887899999999999876
No 310
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.70 E-value=0.09 Score=48.85 Aligned_cols=85 Identities=16% Similarity=0.166 Sum_probs=52.8
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 213 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 213 (414)
.+|.|||+|.+|.-+|..|++.|.+|+++.|.+ . +.+++.|+.+.....-..+.. + .+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~-------------~~i~~~g~~~~~~~g~~~~~~-----~-~~- 60 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--Y-------------EAIAGNGLKVFSINGDFTLPH-----V-KG- 60 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--H-------------HHHHHTCEEEEETTCCEEESC-----C-CE-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--H-------------HHHHhCCCEEEcCCCeEEEee-----c-ee-
Confidence 479999999999999999999999999998743 0 234667877653110000100 0 01
Q ss_pred eCCCc-EEecCEEEEccCCcCCChhhhh
Q 014997 214 LEDGS-TIDADTIVIGIGAKPTVSPFER 240 (414)
Q Consensus 214 ~~~g~-~i~~D~vi~a~G~~p~~~~l~~ 240 (414)
+.+-+ .-++|.||+|+......+.++.
T Consensus 61 ~~~~~~~~~~D~vilavk~~~~~~~l~~ 88 (312)
T 3hn2_A 61 YRAPEEIGPMDLVLVGLKTFANSRYEEL 88 (312)
T ss_dssp ESCHHHHCCCSEEEECCCGGGGGGHHHH
T ss_pred ecCHHHcCCCCEEEEecCCCCcHHHHHH
Confidence 11111 1268999999877655444443
No 311
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=93.66 E-value=0.077 Score=51.59 Aligned_cols=50 Identities=18% Similarity=0.367 Sum_probs=40.4
Q ss_pred hHHHHcCCeEEcCC---cEEEEeCCCC--E-EEeCCCcEEecCeEEEccCCCCCCC
Q 014997 54 EWYKEKGIEMIYQD---PVTSIDIEKQ--T-LITNSGKLLKYGSLIVATGCTASRF 103 (414)
Q Consensus 54 ~~~~~~~i~~~~~~---~V~~id~~~~--~-V~~~~g~~~~yd~LviAtG~~~~~~ 103 (414)
+.+++.|++++.++ +|++|..++. . |++.+|+++.+|+||+|||+....+
T Consensus 169 ~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 169 REAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp HHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGT
T ss_pred HHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhh
Confidence 44567899999998 9999976554 3 7788898899999999999865433
No 312
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=93.61 E-value=0.074 Score=52.76 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCC-CcEEEEeeCCcc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 168 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 168 (414)
...+|+|||+|..|+-+|..|++.| .+|+++++.+++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3568999999999999999999998 799999988655
No 313
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.56 E-value=0.079 Score=52.14 Aligned_cols=78 Identities=12% Similarity=0.139 Sum_probs=53.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 211 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~ 211 (414)
++++|+|||+|.+|...+..|.+.|.+|+++.+.. .++ +.+..++.+++++.+. +.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~-------~~~----~~~l~~~~~i~~~~~~----~~--------- 66 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF-------IPQ----FTVWANEGMLTLVEGP----FD--------- 66 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC-------CHH----HHHHHTTTSCEEEESS----CC---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC-------CHH----HHHHHhcCCEEEEECC----CC---------
Confidence 57899999999999999999999999999998632 222 2333334567665432 11
Q ss_pred EEeCCCcEEecCEEEEccCCc-CCChh
Q 014997 212 VKLEDGSTIDADTIVIGIGAK-PTVSP 237 (414)
Q Consensus 212 v~~~~g~~i~~D~vi~a~G~~-p~~~~ 237 (414)
.+..-.+|+||.++|.. .|...
T Consensus 67 ----~~~l~~~~lVi~at~~~~~n~~i 89 (457)
T 1pjq_A 67 ----ETLLDSCWLAIAATDDDTVNQRV 89 (457)
T ss_dssp ----GGGGTTCSEEEECCSCHHHHHHH
T ss_pred ----ccccCCccEEEEcCCCHHHHHHH
Confidence 11111479999999987 35444
No 314
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.42 E-value=0.1 Score=42.06 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 478999999999999999999999999999874
No 315
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.34 E-value=0.18 Score=46.95 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=28.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
...+|.|||+|..|.-+|..|++.|.+|+++ +.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4578999999999999999999999999998 54
No 316
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=93.27 E-value=0.05 Score=55.62 Aligned_cols=85 Identities=11% Similarity=0.132 Sum_probs=57.2
Q ss_pred HHHH-cCCeEEcCCcEEEEeCCCCE---EEeCCCcEEecCeEEEccCCCCCCCCCCCCCCCCCEEEecCHHHHHHHHHhh
Q 014997 55 WYKE-KGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 130 (414)
Q Consensus 55 ~~~~-~~i~~~~~~~V~~id~~~~~---V~~~~g~~~~yd~LviAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 130 (414)
.+++ .|++++. .+|+.+..++.. |.+.+|+++.+|.||+|||+.+.... . .+.....
T Consensus 126 ~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i-~-----~G~~~~~------------ 186 (641)
T 3cp8_A 126 IVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLI-H-----IGMDHFP------------ 186 (641)
T ss_dssp HHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEE-E-----ETTEEEE------------
T ss_pred HHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccc-e-----eeeeeec------------
Confidence 3445 4899975 589988765543 67888889999999999999764321 1 1111110
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEe
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 163 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~ 163 (414)
+.+++ |+.+++++|..|.+.|.+|..+.
T Consensus 187 --~g~~v---G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 187 --GGRST---AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp --CSSST---TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred --ccccc---CCchhhhhHHHHHhCCceEEeec
Confidence 11221 46788899999999999887553
No 317
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=93.23 E-value=0.1 Score=46.03 Aligned_cols=47 Identities=13% Similarity=0.122 Sum_probs=36.9
Q ss_pred hHHHHc-CCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCCCC
Q 014997 54 EWYKEK-GIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~-~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
+.+++. |++++. ++|+++..++. .|.+.+|+++.+|+||+|||....
T Consensus 76 ~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 76 YLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 445565 999985 69999986543 467788888999999999998653
No 318
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.21 E-value=0.11 Score=41.39 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=29.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
+.+++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 357999999999999999999999999998764
No 319
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=93.17 E-value=0.14 Score=51.50 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=40.9
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
.+.+++.|++++.+++|+++..++. .|++++|+++.+|.||+|+|..++
T Consensus 227 ~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 227 RATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 3445678999999999999987653 478889999999999999999863
No 320
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=93.15 E-value=0.1 Score=50.74 Aligned_cols=47 Identities=21% Similarity=0.374 Sum_probs=38.5
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
.+.+++.|++++++++|+++..++. .|.+.+| ++.+|+||+|||..+
T Consensus 139 ~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 139 MAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 3445677999999999999976544 6777777 799999999999875
No 321
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=92.98 E-value=0.095 Score=51.73 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=34.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 170 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 170 (414)
.-.|+|||+|..|+-+|..|++.|.+|.++++++++..
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 35799999999999999999999999999999876644
No 322
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.96 E-value=0.1 Score=40.24 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=29.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhCC-CcEEEEeeC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPE 165 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g-~~Vtlv~~~ 165 (414)
.++++|+|+|.+|..++..|.+.| .+|+++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 888888775
No 323
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=92.95 E-value=0.097 Score=51.06 Aligned_cols=37 Identities=11% Similarity=-0.038 Sum_probs=33.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 169 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 169 (414)
..+|+|||+|..|+-+|..|++.|.+|+++++++++-
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 4679999999999999999999999999999886553
No 324
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.88 E-value=0.11 Score=41.48 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=30.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
..++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999999988764
No 325
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.73 E-value=0.2 Score=46.33 Aligned_cols=77 Identities=19% Similarity=0.314 Sum_probs=48.8
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 213 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 213 (414)
.+|.|||+|.+|.-+|..|. .|.+|+++.|.+. - .+.+++.|+.+..... .... .+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~---------~----~~~l~~~G~~~~~~~~-~~~~--------~~~ 59 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE---------Q----AAAIQSEGIRLYKGGE-EFRA--------DCS 59 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH---------H----HHHHHHHCEEEEETTE-EEEE--------CCE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH---------H----HHHHHhCCceEecCCC-eecc--------ccc
Confidence 47999999999999999999 9999999987531 1 1234556877753221 1111 111
Q ss_pred eCCCcEEecCEEEEccCCcC
Q 014997 214 LEDGSTIDADTIVIGIGAKP 233 (414)
Q Consensus 214 ~~~g~~i~~D~vi~a~G~~p 233 (414)
......-++|.||+|+-...
T Consensus 60 ~~~~~~~~~D~vilavK~~~ 79 (307)
T 3ego_A 60 ADTSINSDFDLLVVTVKQHQ 79 (307)
T ss_dssp EESSCCSCCSEEEECCCGGG
T ss_pred ccccccCCCCEEEEEeCHHH
Confidence 11111235899999976543
No 326
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=92.52 E-value=0.15 Score=48.88 Aligned_cols=45 Identities=16% Similarity=0.417 Sum_probs=37.3
Q ss_pred HHHc-CCeEEcCCcEEEEeCCCC----EEEeCCCcEEecCeEEEccCCCC
Q 014997 56 YKEK-GIEMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 56 ~~~~-~i~~~~~~~V~~id~~~~----~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
+++. |++++.+++|++++.+.. .|++++|+++.+|.||.|+|.+.
T Consensus 117 ~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 117 IDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred hhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 3344 899999999999986543 67888898899999999999864
No 327
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.47 E-value=0.22 Score=48.10 Aligned_cols=46 Identities=17% Similarity=0.270 Sum_probs=38.2
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT 99 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~~ 99 (414)
+.+++.|++++++++|++|+.++..+.+.+|+++.+|+||+|+|..
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHH
T ss_pred HHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHH
Confidence 4456679999999999999987655555678889999999999974
No 328
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.44 E-value=0.14 Score=48.09 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=39.0
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCC---CEEEeCCC--cEEecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEK---QTLITNSG--KLLKYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~---~~V~~~~g--~~~~yd~LviAtG~~~ 100 (414)
.+.+++.|++++.+++|+++..++ ..|.+++| .++.+|+||+|+|...
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 345667899999999999998753 36778887 4799999999999864
No 329
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.43 E-value=0.084 Score=48.03 Aligned_cols=34 Identities=24% Similarity=0.492 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
++++|+|||||.+|...+..|.+.|.+|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5799999999999999999999999999999864
No 330
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=92.29 E-value=0.13 Score=50.54 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH 167 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~ 167 (414)
..+|+|||+|..|+-+|..|.+.|. +|+++++.++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~ 39 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDH 39 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence 4689999999999999999999998 8999998643
No 331
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=92.09 E-value=0.32 Score=48.03 Aligned_cols=55 Identities=22% Similarity=0.361 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhCC-cEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 176 SLAQRYEQLYQQNG-VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 176 ~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
.+.+.+.+.+++.| +++++++.|++|+..+++ + .|.+.+|+++.||.||+|+|..
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHH
Confidence 56667777788888 999999999999865443 3 5778888889999999999963
No 332
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=91.88 E-value=0.15 Score=51.33 Aligned_cols=58 Identities=10% Similarity=0.081 Sum_probs=39.5
Q ss_pred cCCCCCCCCHhHHHH-cCCeEEcCCcEEEEeC-C-C------CE--EEeC---CCc--EEecCeEEEccCCCCC
Q 014997 44 VGSGGERQTPEWYKE-KGIEMIYQDPVTSIDI-E-K------QT--LITN---SGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 44 ~g~~~~~~~~~~~~~-~~i~~~~~~~V~~id~-~-~------~~--V~~~---~g~--~~~yd~LviAtG~~~~ 101 (414)
+|..+.....+.+++ .||+++.++.|+++.. + + +. |.+. +|+ .+.+|.||+|||....
T Consensus 136 ~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 136 TGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp ------CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred CHHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 455556667788888 7999999999999875 3 3 31 3333 565 6899999999998653
No 333
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.75 E-value=0.22 Score=46.31 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 169 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 169 (414)
..++|.|||+|.+|.-+|..++..|.+|++++..+..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l 42 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQI 42 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 35789999999999999999999999999998876543
No 334
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.64 E-value=0.17 Score=42.68 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhC-CCcEEEEeeCC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 166 (414)
+++++|+|.|.+|..+|..|.+. |.+|+++++.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 56899999999999999999999 99999998753
No 335
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.62 E-value=0.19 Score=47.70 Aligned_cols=47 Identities=30% Similarity=0.335 Sum_probs=38.0
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC--E-EEeCCCcEEecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ--T-LITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~--~-V~~~~g~~~~yd~LviAtG~~~ 100 (414)
.+.+++.|++++.+++|++++.++. . |.+.+| ++.+|+||+|||...
T Consensus 156 ~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 156 AVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 3556678999999999999986654 2 667777 799999999999864
No 336
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.36 E-value=0.13 Score=48.57 Aligned_cols=46 Identities=11% Similarity=0.124 Sum_probs=37.2
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
+.+++.|++++.+++|+++..++. .|++++| ++.+|+||+|||...
T Consensus 162 ~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 162 RGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 455678999999999999976543 5677777 799999999999853
No 337
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.34 E-value=0.23 Score=46.84 Aligned_cols=47 Identities=28% Similarity=0.404 Sum_probs=37.6
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
+.+++.|++++.+++|+++..++. .|++++|+ +.+|+||+|||....
T Consensus 157 ~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 157 QLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred HHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 445678999999999999986543 56777775 999999999998643
No 338
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=91.25 E-value=0.18 Score=51.95 Aligned_cols=49 Identities=10% Similarity=0.113 Sum_probs=35.8
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCE---EEe---CCCc--EEecCeEEEccCCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQT---LIT---NSGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~---V~~---~~g~--~~~yd~LviAtG~~~~ 101 (414)
.+.+.+.||+++.++.|+++..++.. |.+ .+|+ .+.+|.+|+|||....
T Consensus 165 ~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 165 ANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 44556789999999999998654332 222 5675 4899999999998643
No 339
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.85 E-value=0.3 Score=50.44 Aligned_cols=48 Identities=17% Similarity=0.282 Sum_probs=38.9
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
+.+++.|++++.+++|+++..++. .|.+.+|.++.+|.||+|||....
T Consensus 425 ~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 425 ELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred HHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 445678999999999999986554 556777778999999999998644
No 340
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=90.83 E-value=0.3 Score=48.21 Aligned_cols=47 Identities=9% Similarity=0.209 Sum_probs=39.1
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCE---EEeCCCcEEecCeEEEccCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCT 99 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~---V~~~~g~~~~yd~LviAtG~~ 99 (414)
.+.+++.|.+++++++|++|..++.. |++++|+++.+|.||.+++..
T Consensus 228 ~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 228 IKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 45567889999999999999877653 678999999999999998864
No 341
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=90.78 E-value=0.72 Score=47.15 Aligned_cols=59 Identities=17% Similarity=0.142 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCC-CcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 176 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 176 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
.+.+.+.+.++..|.++++++.|.+|..+++ +++..|.+.+|+++.||.||......|.
T Consensus 379 ~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 379 ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 6778888899999999999999999976543 7787888888999999999998776664
No 342
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=90.75 E-value=0.43 Score=46.66 Aligned_cols=58 Identities=19% Similarity=0.241 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecC-CCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 176 SLAQRYEQLYQQNGVKFVKGASIKNLEAGS-DGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 176 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
.+.+.+.+.+++.|.++++++.|++|.... ++++..|.+ +|+++.||.||+++|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 677778888899999999999999998642 566666766 5778999999999998754
No 343
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=90.68 E-value=0.12 Score=53.71 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=34.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCC--------CcEEEEeeCC-cccc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWK--------LDTTIIFPEN-HLLQ 170 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g--------~~Vtlv~~~~-~~l~ 170 (414)
.++|+|||+|..|+-+|..|.+.| .+|+|+++.+ ++..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~ 102 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLH 102 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccccc
Confidence 368999999999999999999988 8999999998 8754
No 344
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.55 E-value=0.26 Score=45.86 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCC-CcEEEEeeCC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g-~~Vtlv~~~~ 166 (414)
..+|.|||.|..|.-+|..|++.| .+|+++.+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 368999999999999999999999 9999998765
No 345
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.31 E-value=0.4 Score=49.70 Aligned_cols=48 Identities=17% Similarity=0.234 Sum_probs=38.2
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCc-EEecCeEEEccCCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK-LLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~-~~~yd~LviAtG~~~~ 101 (414)
+.+++.|++++.+++|+++..++. .|.+.+|. ++.+|.||+|||....
T Consensus 420 ~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 420 MLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 445678999999999999986543 56777876 7999999999998654
No 346
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.12 E-value=0.39 Score=43.79 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 169 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 169 (414)
-++|.|||+|.+|..+|..|++.|.+|+++++.+..+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDAL 40 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 3789999999999999999999999999998776433
No 347
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=89.91 E-value=0.28 Score=46.74 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=37.9
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
.+.+++.|++++.+++|+++..++. .|++++| ++.+|+||+|+|...
T Consensus 181 ~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 181 ARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 3446678999999999999986543 4677777 699999999999864
No 348
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=89.59 E-value=0.3 Score=46.16 Aligned_cols=46 Identities=24% Similarity=0.289 Sum_probs=37.3
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
+.+++.|++++.+++|++++.++. .|.+++| ++.+|+||+|+|...
T Consensus 172 ~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 172 KAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 445678999999999999987654 4667777 799999999999864
No 349
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=89.37 E-value=0.34 Score=48.69 Aligned_cols=56 Identities=18% Similarity=0.310 Sum_probs=42.8
Q ss_pred CCcEEEcCceEEEEEecCCCcEEEEEeCC---Cc--EE---ecCEEEEccCCcCCChhhhhcCCc
Q 014997 188 NGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TI---DADTIVIGIGAKPTVSPFERVGLN 244 (414)
Q Consensus 188 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~---g~--~i---~~D~vi~a~G~~p~~~~l~~~gl~ 244 (414)
.|+++++++.|+++..+ ++++..|++.+ |+ ++ .++.||+|+|......+|..+|+.
T Consensus 209 ~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 209 PNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp TTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred CCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 48999999999999764 46777888765 53 34 889999999986555677777764
No 350
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=89.30 E-value=0.39 Score=45.44 Aligned_cols=47 Identities=23% Similarity=0.346 Sum_probs=37.2
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
.+.+++.|++++.+++|++++.++. .|++++| ++.+|+||+|+|...
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 157 RELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 3455678999999999999986543 5666666 699999999999864
No 351
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.16 E-value=0.69 Score=44.90 Aligned_cols=62 Identities=23% Similarity=0.365 Sum_probs=42.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccc-------cccCHHHHHHHHHHHHhCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-------RLFTPSLAQRYEQLYQQNGVKFV 193 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------~~~~~~~~~~~~~~l~~~gv~i~ 193 (414)
.+.+..|||.|+.|+-+|..|++.|.+|+++++.+.... ....+.+.+.+.+.+....+.+-
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t 78 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS 78 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe
Confidence 578899999999999999999999999999987753221 11234444455554444445443
No 352
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=89.06 E-value=0.42 Score=45.58 Aligned_cols=45 Identities=18% Similarity=0.300 Sum_probs=35.8
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCT 99 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~ 99 (414)
+.+++.|++++.+++|+++..++. .|.+++| ++.+|+||+|+|..
T Consensus 161 ~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 161 TLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 345678999999999999976553 4556555 69999999999986
No 353
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=88.95 E-value=0.51 Score=45.31 Aligned_cols=46 Identities=17% Similarity=0.202 Sum_probs=37.2
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCE---EEeCCCcEEecCeEEEccCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCT 99 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~---V~~~~g~~~~yd~LviAtG~~ 99 (414)
.+.+++.|++++++++|++|..++.. |++ +|+++.+|.||+|+|..
T Consensus 203 ~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 203 ETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHA 251 (425)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHH
T ss_pred HHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHH
Confidence 45566789999999999999876543 455 47789999999999974
No 354
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=88.91 E-value=0.43 Score=47.32 Aligned_cols=49 Identities=16% Similarity=0.101 Sum_probs=38.0
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCC-----CCEEEe--C-CC--cEEecCeEEEccCCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIE-----KQTLIT--N-SG--KLLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~-----~~~V~~--~-~g--~~~~yd~LviAtG~~~~ 101 (414)
.+.+++.|++++++++|+++..+ ...|++ . +| +++.+|+||+|||.++.
T Consensus 173 ~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 173 LKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 34456679999999999999863 236666 4 56 47999999999998764
No 355
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.89 E-value=0.47 Score=41.58 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=31.5
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++|+|.|+ |.+|..++..|.+.|.+|+++.|.+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 5789999997 9999999999999999999998865
No 356
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=88.89 E-value=0.27 Score=50.70 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=33.7
Q ss_pred HhHHHHc--CCeEEcCCcEEEEeCCCC---EE------EeCCCc--EEecCeEEEccCCCCC
Q 014997 53 PEWYKEK--GIEMIYQDPVTSIDIEKQ---TL------ITNSGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~--~i~~~~~~~V~~id~~~~---~V------~~~~g~--~~~yd~LviAtG~~~~ 101 (414)
.+.+++. ||+++.++.|+++-.+.. .| .+.+|+ .+.++.+|||||....
T Consensus 173 ~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 173 AEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 4455666 999999888877654432 22 124554 5899999999998653
No 357
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=88.88 E-value=0.32 Score=47.30 Aligned_cols=57 Identities=18% Similarity=0.366 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCcCC
Q 014997 176 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 234 (414)
Q Consensus 176 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 234 (414)
.+.+.+.+.+++.|+++++++.|++|... ++.+..+. .+|+++.||.||+++|..+.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 66777788888889999999999999864 45555555 47788999999999998764
No 358
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.66 E-value=0.2 Score=40.44 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+++++|||+|.+|..++..|...|.+|+++.|.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4899999999999999999999999888887764
No 359
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.47 E-value=0.39 Score=41.77 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=29.4
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
+++|+|+|..|..+|..|.+.|.+|+++++.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 68999999999999999999999999998653
No 360
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.31 E-value=0.61 Score=45.05 Aligned_cols=50 Identities=14% Similarity=0.234 Sum_probs=39.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKG 195 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~ 195 (414)
..+|+|+|.|..|..+|..|.+.|.+|+++++.+. .. +.+++.|++++.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~---------~v----~~~~~~g~~vi~G 53 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD---------HI----ETLRKFGMKVFYG 53 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH---------HH----HHHHHTTCCCEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH---------HH----HHHHhCCCeEEEc
Confidence 46799999999999999999999999999987642 11 2345667776654
No 361
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.27 E-value=0.51 Score=44.54 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
|+|+|+|||..|.+++..++++|.+|.+++..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKN 33 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 68999999999999999999999999999865
No 362
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=88.26 E-value=0.49 Score=45.59 Aligned_cols=41 Identities=32% Similarity=0.341 Sum_probs=34.3
Q ss_pred HHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCC
Q 014997 57 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGC 98 (414)
Q Consensus 57 ~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~ 98 (414)
++.+ +++++++|++|+.++. .|++.+|+++.+|+||+|+|.
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPM 257 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCG
T ss_pred hhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCc
Confidence 3456 9999999999986543 677888888999999999994
No 363
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=88.25 E-value=0.61 Score=43.44 Aligned_cols=42 Identities=19% Similarity=0.435 Sum_probs=35.2
Q ss_pred HHcCCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCC
Q 014997 57 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGC 98 (414)
Q Consensus 57 ~~~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~ 98 (414)
++.|++++++++|++|+.++. +|++++|+.+.+|+||+|+..
T Consensus 120 ~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 120 KESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 345899999999999987653 677788887899999999985
No 364
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.15 E-value=0.63 Score=42.04 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++|+|.|+|++|..++..|.+.|.+|+.+.|..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999999999999999999999998865
No 365
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=88.00 E-value=1 Score=42.77 Aligned_cols=47 Identities=13% Similarity=0.120 Sum_probs=37.7
Q ss_pred HHHHcCCeEEcCCcEEEEeCCC---CEEEe-CCCc--EEecCeEEEccCCCCC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEK---QTLIT-NSGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~---~~V~~-~~g~--~~~yd~LviAtG~~~~ 101 (414)
.+.+.|++++.+++|+++..+. ..|++ ++|+ ++.+|.||.|+|.+..
T Consensus 112 ~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 112 AREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 3456799999999999998642 46776 6887 7999999999998653
No 366
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=87.93 E-value=0.44 Score=45.75 Aligned_cols=47 Identities=21% Similarity=0.260 Sum_probs=37.0
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC----EEEeCCCc--EEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ----TLITNSGK--LLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~----~V~~~~g~--~~~yd~LviAtG~~~ 100 (414)
+.+++.|++++.+++|++++.+.. .|.+.+|+ ++.+|.||.|+|...
T Consensus 114 ~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 114 DEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 344567999999999999986543 34557887 699999999999764
No 367
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.81 E-value=0.62 Score=44.72 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+.+|+|+|+|.+|..+|..+..+|.+|+++++.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 46799999999999999999999999999888765
No 368
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.71 E-value=0.64 Score=40.21 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
...+|.|||.|.+|..+|..|++.|.+|+++.+.+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45789999999999999999999999999998764
No 369
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=87.68 E-value=0.72 Score=47.15 Aligned_cols=54 Identities=15% Similarity=0.029 Sum_probs=42.5
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN 188 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~ 188 (414)
-.++|+|+|..++-+|..|++.|++|.++++++++...+....+. .+.+++++.
T Consensus 9 ~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~-~l~~w~~~~ 62 (650)
T 1vg0_A 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFS-GLLSWLKEY 62 (650)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHH-HHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHH-HHHHHHHHh
Confidence 479999999999999999999999999999999887665544433 344444443
No 370
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.66 E-value=0.45 Score=45.27 Aligned_cols=35 Identities=26% Similarity=0.207 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
++.+|+|+|+|.+|..+|..+..+|.+|+++++.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999999999999988765
No 371
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.62 E-value=0.57 Score=43.06 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
-++|.|||+|..|.-+|..|++.|.+|+++++.+.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999987653
No 372
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=87.61 E-value=0.97 Score=45.16 Aligned_cols=47 Identities=21% Similarity=0.473 Sum_probs=37.4
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCC--C--EEEeCCCcEEecCeEEEccCCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~--~--~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
+.+++.|++++.+ +|++++.+. . .|.+.+|+++.+|.||.|+|.+..
T Consensus 173 ~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 173 RWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 3445679999998 899997642 2 577888888999999999998654
No 373
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.46 E-value=0.61 Score=42.47 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=30.0
Q ss_pred eEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 135 KVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 135 ~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
+|+|.|| |++|..++..|.+.|.+|+.+.|.+.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5899997 99999999999999999999988753
No 374
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=87.44 E-value=0.87 Score=44.45 Aligned_cols=55 Identities=29% Similarity=0.459 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 176 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 176 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
.+.+.+.+.+++.|++|++++.|++|...+++. ..|.+ ++.++.||.||++++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEE-CCeEEEcCEEEECCCHH
Confidence 466777888889999999999999998654442 35555 45579999999998763
No 375
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.39 E-value=0.5 Score=42.23 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~ 166 (414)
..++|+|||.|-+|.++|..|++.|. +++++++..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 35799999999999999999999996 789888763
No 376
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=87.38 E-value=0.65 Score=44.32 Aligned_cols=42 Identities=10% Similarity=0.030 Sum_probs=35.8
Q ss_pred cCCeEEcCCcEEEEeCCC--CEEEeCCCcEEecCeEEEccCCCC
Q 014997 59 KGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 59 ~~i~~~~~~~V~~id~~~--~~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
.+++++.+++|++++.+. -+|++.+|+++.+|.||.|+|.+.
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 389999999999997654 367788998999999999999864
No 377
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=87.16 E-value=0.44 Score=47.45 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=29.7
Q ss_pred CeEEEECCChHHHHHHHHHHh-CCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~-~g~~Vtlv~~~~ 166 (414)
-.++|||+|..|+-+|..|++ .+.+|.|+|+++
T Consensus 18 yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 18 CDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred eeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 479999999999999999997 578999999885
No 378
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=87.16 E-value=0.56 Score=45.54 Aligned_cols=47 Identities=19% Similarity=0.330 Sum_probs=37.1
Q ss_pred HhHHHHcCCeEEcCCcEEEEeC---------------CCC---EEEeCCCcEE--ecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDI---------------EKQ---TLITNSGKLL--KYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~---------------~~~---~V~~~~g~~~--~yd~LviAtG~~~ 100 (414)
.+.+++.|++++.+++|+++.. ++. .|.+.+| ++ .+|.||+|||...
T Consensus 188 ~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 188 YRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 3455678999999999999976 333 4677777 58 9999999999753
No 379
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=86.90 E-value=0.32 Score=48.02 Aligned_cols=43 Identities=14% Similarity=0.263 Sum_probs=38.0
Q ss_pred HHHcCCeEEcCCcEEEEeCCCCEEEeCCCcEEecCeEEEccCC
Q 014997 56 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGC 98 (414)
Q Consensus 56 ~~~~~i~~~~~~~V~~id~~~~~V~~~~g~~~~yd~LviAtG~ 98 (414)
+.+.|++++++++|++|+.+++.+++.+|+++.||+||.++-.
T Consensus 232 l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 232 LPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp SCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSCH
T ss_pred HHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCCH
Confidence 3456899999999999999999999999999999999987653
No 380
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=86.90 E-value=0.72 Score=46.31 Aligned_cols=46 Identities=15% Similarity=0.347 Sum_probs=36.8
Q ss_pred HHHHc-CCeEEcCCcEEEEeCC--C--CEEEeCCCcEEecCeEEEccCCCCC
Q 014997 55 WYKEK-GIEMIYQDPVTSIDIE--K--QTLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 55 ~~~~~-~i~~~~~~~V~~id~~--~--~~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
.+++. |++++.+ +|++++.+ . ..|.+.+|+++.+|.||.|+|....
T Consensus 203 ~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 203 FATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 34556 9999998 99999753 2 2577888888999999999998654
No 381
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=86.67 E-value=0.72 Score=41.74 Aligned_cols=33 Identities=18% Similarity=0.135 Sum_probs=30.4
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
+|.|||+|.+|.-+|..|.+.|.+|+++.|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 689999999999999999999999999988764
No 382
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=86.63 E-value=0.7 Score=45.07 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=35.9
Q ss_pred HHHcCCeEEcCCcEEEEeCCCCE---EEeC---CCc--EEecCeEEEccCCCCC
Q 014997 56 YKEKGIEMIYQDPVTSIDIEKQT---LITN---SGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 56 ~~~~~i~~~~~~~V~~id~~~~~---V~~~---~g~--~~~yd~LviAtG~~~~ 101 (414)
+.+.|++++.+++|++++.++.. |++. +|+ ++.+|.||.|+|....
T Consensus 110 a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 110 AQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 45579999999999999876544 4443 665 7999999999998653
No 383
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.62 E-value=0.71 Score=44.43 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++|+|+|+|.+|..++..++.+|.+|+++++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 36899999999999999999999999998887754
No 384
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.55 E-value=0.82 Score=41.84 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.++++.|||.|.+|..+|..|...|.+|+++.+.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 5789999999999999999999999999888765
No 385
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.54 E-value=0.72 Score=42.87 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
-++|.|||+|..|.-+|..|++.|.+|+++++.+..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~ 41 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQ 41 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 478999999999999999999999999999887643
No 386
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=86.44 E-value=0.73 Score=45.73 Aligned_cols=34 Identities=21% Similarity=0.115 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
-.++|||+|..|+-+|..|++.|.+|.+++++..
T Consensus 6 ~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 6 VPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3689999999999999999999999999998763
No 387
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=86.42 E-value=0.72 Score=41.88 Aligned_cols=47 Identities=6% Similarity=0.181 Sum_probs=34.5
Q ss_pred HHHH-cCCeEEcCCcEEEEeCCCCE---EEeC---------CC-----cEEecCeEEEccCCCCC
Q 014997 55 WYKE-KGIEMIYQDPVTSIDIEKQT---LITN---------SG-----KLLKYGSLIVATGCTAS 101 (414)
Q Consensus 55 ~~~~-~~i~~~~~~~V~~id~~~~~---V~~~---------~g-----~~~~yd~LviAtG~~~~ 101 (414)
.+.+ .|++++.+++|++++.+... |.+. +| .++.+|.||+|||..+.
T Consensus 128 ~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 128 KLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp HHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred HHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 3444 69999999999999866543 2332 22 57999999999998653
No 388
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.40 E-value=0.82 Score=41.97 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.++++.|||.|.+|..+|..|...|.+|+++.+.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 5789999999999999999999999999988765
No 389
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.33 E-value=1.4 Score=39.76 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
+++++|+|+|-.|.-++..|.+.|.+|+++.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7899999999999999999999999999998865
No 390
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=86.31 E-value=0.79 Score=45.34 Aligned_cols=75 Identities=16% Similarity=0.150 Sum_probs=53.7
Q ss_pred CCCeEEEECCChHHHH-HHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q 014997 132 KAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
..++|.|||-|-+|+- +|..|.++|.+|+..+.... +. .+.|++.|++++.+... .
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~~-----~~~l~~~gi~~~~g~~~-----~------ 74 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------PV-----TQQLMNLGATIYFNHRP-----E------ 74 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------HH-----HHHHHHTTCEEESSCCG-----G------
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCC-------HH-----HHHHHHCCCEEECCCCH-----H------
Confidence 3578999999999997 99999999999998876441 11 13567889999866421 0
Q ss_pred EEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 211 AVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 211 ~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
.+ + .+|.||+..|..+..+
T Consensus 75 --~~-~----~a~~vv~s~~i~~~~p 93 (491)
T 2f00_A 75 --NV-R----DASVVVVSSAISADNP 93 (491)
T ss_dssp --GG-T----TCSEEEECTTCCTTCH
T ss_pred --Hc-C----CCCEEEECCCCCCCCH
Confidence 01 1 3688999888765433
No 391
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=86.31 E-value=1.2 Score=41.31 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
.++++.|||-|.+|..+|..|...|.+|+.+.+.+.
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~ 173 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRK 173 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCch
Confidence 368999999999999999999999999999987654
No 392
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=86.28 E-value=0.44 Score=47.80 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
-.++|||+|..|+-+|..|++ |.+|.|+++++.
T Consensus 27 yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 27 YDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred ccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 369999999999999999999 999999998743
No 393
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.25 E-value=0.85 Score=41.24 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+++++|+|+|-+|..+|..|.+.|.+|+++.|.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 5789999999999999999999999999988765
No 394
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.21 E-value=0.53 Score=41.18 Aligned_cols=37 Identities=27% Similarity=0.311 Sum_probs=28.3
Q ss_pred CCCCCCCcEEEEccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 014997 255 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 302 (414)
Q Consensus 255 ~~~t~~~~IyA~GD~a~~~~~~~~~~~~~~~~~~A~~~a~~aa~~i~~ 302 (414)
.++++.++||++||++..+ .+..|+..|+.||+.|+.
T Consensus 289 ~~~~~~~~v~l~GDa~~g~-----------gv~~A~~sG~~aA~~I~~ 325 (336)
T 3kkj_A 289 ALSDADLGIYVCGDWCLSG-----------RVEGAWLSGQEAARRLLE 325 (336)
T ss_dssp SEEETTTTEEECCGGGTTS-----------SHHHHHHHHHHHHHHHHH
T ss_pred ceeeCCCCEEEEecccCCc-----------CHHHHHHHHHHHHHHHHH
Confidence 4456789999999986532 356688899999988875
No 395
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=86.17 E-value=0.9 Score=44.04 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=32.2
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
-.+++++|+|.|.+|..+|..++.+|.+|++.++.+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 368999999999999999999999999999887643
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.14 E-value=0.83 Score=43.64 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++|+|+|+|.+|..++..++.+|.+|+++++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999988887764
No 397
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.09 E-value=0.91 Score=43.84 Aligned_cols=35 Identities=26% Similarity=0.184 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++++|+|.|.+|..+|..|+.+|.+|+++++.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 68999999999999999999999999998887643
No 398
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=86.02 E-value=1.3 Score=43.89 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=37.3
Q ss_pred hHHHHcCCeEEcCCcEEEEeCC--C--CEEEeCCCcEEecCeEEEccCCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIE--K--QTLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~--~--~~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
+.+.+.|++++.+ +|++++.+ . ..|++++|+++.+|.||.|+|.+..
T Consensus 181 ~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 181 EYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3445679999998 99999763 2 2577888888999999999998643
No 399
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.99 E-value=0.87 Score=43.21 Aligned_cols=35 Identities=31% Similarity=0.515 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++|+|+|+|.+|..+|..++..|.+|+++.+.+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 46899999999999999999999999999887653
No 400
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=85.81 E-value=0.95 Score=45.63 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=36.4
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCC-CE---EEeC--CCc--EEecCeEEEccCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEK-QT---LITN--SGK--LLKYGSLIVATGCTA 100 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~-~~---V~~~--~g~--~~~yd~LviAtG~~~ 100 (414)
.+.+++.||+++++++|+++..+. .. |.+. +|+ ++.+|.||+|||...
T Consensus 262 ~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 262 YDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 455667899999999999997654 31 3333 675 689999999999864
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.79 E-value=0.64 Score=41.92 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
++|+|.|+|++|..++..|.+.|.+|+.+.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 689999999999999999999999999998764
No 402
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=85.61 E-value=2.4 Score=41.61 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=33.6
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhC-CC-cEEEEeeCCc
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGW-KL-DTTIIFPENH 167 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~-g~-~Vtlv~~~~~ 167 (414)
.+-.+|.|||.|..|.-+|..|++. |. +|+++.+.+.
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3557899999999999999999999 99 9999998775
No 403
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=85.61 E-value=0.86 Score=45.23 Aligned_cols=54 Identities=13% Similarity=0.124 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEeCCCcEEecCEEEEccCCc
Q 014997 177 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 232 (414)
Q Consensus 177 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 232 (414)
+...+....++.|+++++++.|++|..++ +.+ .|.+.+|+++.||.||++++..
T Consensus 214 ~~~l~~~l~~~lg~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 214 SGQVSERIMDLLGDRVKLERPVIYIDQTR-ENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp THHHHHHHHHHHGGGEESSCCEEEEECSS-SSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHHHHHcCCcEEcCCeeEEEEECC-CeE-EEEECCCeEEEeCEEEECCCHH
Confidence 33444444455588999999999998653 344 4788899899999999999864
No 404
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.58 E-value=0.94 Score=43.15 Aligned_cols=35 Identities=29% Similarity=0.356 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++|+|+|+|.+|..+|..++.+|.+|+++.+.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46899999999999999999999999998887653
No 405
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.57 E-value=0.94 Score=43.20 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=32.1
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
..+++|+|+|+|.+|..++..+.++|.+|.++...
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999999999999999999999999998865
No 406
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.51 E-value=0.9 Score=38.43 Aligned_cols=34 Identities=26% Similarity=0.474 Sum_probs=30.8
Q ss_pred CeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
++++|.|+ |.+|..++..|.+.|.+|+++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 68999997 99999999999999999999988653
No 407
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=85.49 E-value=2.4 Score=39.38 Aligned_cols=56 Identities=27% Similarity=0.401 Sum_probs=40.5
Q ss_pred CCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEc
Q 014997 133 AKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 194 (414)
Q Consensus 133 ~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~ 194 (414)
.++|+|.|+ |.+|..++..|.+.|.+|+++.|.+.. .+.-...+ +.+...+++++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~~~~-~~l~~~~v~~~~ 66 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPR-----SPSKAKIF-KALEDKGAIIVY 66 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCC-----CHHHHHHH-HHHHHTTCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCC-----ChhHHHHH-HHHHhCCcEEEE
Confidence 468999998 999999999999999999999887522 22222222 345667777764
No 408
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.30 E-value=1.7 Score=42.30 Aligned_cols=60 Identities=15% Similarity=0.249 Sum_probs=44.2
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccc-------ccccCHHHHHHHHHHHHhCCcEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------QRLFTPSLAQRYEQLYQQNGVKFV 193 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~~~~~~~~~~~~~~~l~~~gv~i~ 193 (414)
.+|.|||.|++|+-+|..|++.|.+|+-++..+... .....+.+.+.+.+.++...+++-
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~t 88 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFA 88 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEE
Confidence 589999999999999999999999999987654221 112445666677776666655543
No 409
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.27 E-value=1 Score=39.90 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
..++|.|||.|..|.-+|..|++.|.+|+++.|.+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46899999999999999999999999999988764
No 410
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=85.18 E-value=0.78 Score=45.15 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=53.5
Q ss_pred CCCeEEEECCChHHHH-HHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q 014997 132 KAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 210 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~ 210 (414)
..+++.|||-|-+|+- +|..|.++|.+|+..+.... +. .+.|++.|+++..+....
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~-------~~-----~~~l~~~gi~~~~g~~~~----------- 73 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADG-------VV-----TQRLAQAGAKIYIGHAEE----------- 73 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCS-------HH-----HHHHHHTTCEEEESCCGG-----------
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCC-------HH-----HHHHHhCCCEEECCCCHH-----------
Confidence 3578999999999997 99999999999999876541 11 235678899887654210
Q ss_pred EEEeCCCcEEecCEEEEccCCcCCCh
Q 014997 211 AVKLEDGSTIDADTIVIGIGAKPTVS 236 (414)
Q Consensus 211 ~v~~~~g~~i~~D~vi~a~G~~p~~~ 236 (414)
.+ + .+|.||+..|..++.+
T Consensus 74 --~~-~----~a~~vv~s~~i~~~~~ 92 (475)
T 1p3d_A 74 --HI-E----GASVVVVSSAIKDDNP 92 (475)
T ss_dssp --GG-T----TCSEEEECTTSCTTCH
T ss_pred --Hc-C----CCCEEEECCCCCCCCH
Confidence 01 1 3688999988765443
No 411
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=85.15 E-value=1.1 Score=44.38 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=36.8
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCCE---EE--eCCCc--EEecCeEEEccCCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQT---LI--TNSGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~~---V~--~~~g~--~~~yd~LviAtG~~~~ 101 (414)
+.+++.|++++.+++|+++..++.. |. ..+|+ ++.+|.||.|+|.+..
T Consensus 119 ~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 119 RNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 3445679999999999999876642 33 44574 7999999999998653
No 412
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=85.05 E-value=0.9 Score=45.12 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
-.++|||+|..|+-+|..|++.|.+|.+++++..
T Consensus 12 ~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 12 VPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4689999999999999999999999999998753
No 413
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=84.90 E-value=0.98 Score=44.36 Aligned_cols=34 Identities=26% Similarity=0.176 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+++++|+|+|.+|..+|..|+..|.+|.++++.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 6899999999999999999999999999887654
No 414
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.85 E-value=1.9 Score=41.98 Aligned_cols=62 Identities=13% Similarity=0.344 Sum_probs=43.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCccccc-------ccCHHHHHHHHHHHHhCCcEEE
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------LFTPSLAQRYEQLYQQNGVKFV 193 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~~~~~~~~~~~~~l~~~gv~i~ 193 (414)
..-++.|||.|..|+-+|..|++.|.+|+++.+.+..... .+.+.+.+.+.+.....++++-
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t 75 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT 75 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE
Confidence 3468999999999999999999999999999987643221 1233444444444444445554
No 415
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=84.71 E-value=0.96 Score=41.47 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
..++|.|||.|.+|.-+|..|+ .|.+|+++++.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999998765
No 416
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=84.64 E-value=1.1 Score=43.43 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=32.4
Q ss_pred hcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 130 LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 130 ~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
+.++++|+|+|+|.+|..++..+.++|.+|.++++.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 347899999999999999999999999999988754
No 417
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.54 E-value=1.1 Score=38.40 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=29.1
Q ss_pred eEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 135 KVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 135 ~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
+|+|.|+ |.+|..++..|.+.|.+|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6899995 9999999999999999999998864
No 418
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=84.43 E-value=1.4 Score=43.79 Aligned_cols=46 Identities=22% Similarity=0.224 Sum_probs=36.2
Q ss_pred HHHH-cCCeEEcCCcEEEEeCCC--C--EEEeCCCcEEecCeEEEccCCCCC
Q 014997 55 WYKE-KGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 55 ~~~~-~~i~~~~~~~V~~id~~~--~--~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
.+++ .|++++.+ +|++++.+. . .|++++|.++.+|+||.|+|.+..
T Consensus 184 ~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 184 HCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3455 79999998 699997642 3 567778778999999999998654
No 419
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=84.42 E-value=0.9 Score=42.99 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=35.9
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCCE---EEe---CCCcEEecCeEEEccCCCC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQT---LIT---NSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~~---V~~---~~g~~~~yd~LviAtG~~~ 100 (414)
.+++.|++++.+++|+++..++.. |++ .++.++.+|.||.|+|...
T Consensus 111 ~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 111 LAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 345579999999999999876543 444 3556899999999999864
No 420
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=84.38 E-value=1.1 Score=40.78 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
.+|.|||.|.+|..+|..|++.|.+|+++.+.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999887653
No 421
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=84.36 E-value=0.9 Score=45.32 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=36.6
Q ss_pred HHHHcCCeEEcCCcEEEEeCCCC------EEEeCCC---cEEecCeEEEccCCCC
Q 014997 55 WYKEKGIEMIYQDPVTSIDIEKQ------TLITNSG---KLLKYGSLIVATGCTA 100 (414)
Q Consensus 55 ~~~~~~i~~~~~~~V~~id~~~~------~V~~~~g---~~~~yd~LviAtG~~~ 100 (414)
.+++.|++++.+++|+++..+.. ++++.++ .++.+|+||.|+|.+.
T Consensus 129 ~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 129 QARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 34567999999999999976554 4555565 6799999999999864
No 422
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=84.25 E-value=1.1 Score=40.67 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=30.3
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGG-YIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG-~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+++++|||.| ..|.-+|..|.+.|..||++++.
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 68999999965 58999999999999999999764
No 423
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=84.15 E-value=1.1 Score=41.72 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=29.8
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
++++|+|.|+ |++|..++..|.+.|.+|+.+.|.+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 5688999997 9999999999999999999998765
No 424
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=84.15 E-value=1.1 Score=42.66 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=35.0
Q ss_pred CCeEEcCCcEEEEeCCCC--EEEeCCCcEEecCeEEEccCCCCC
Q 014997 60 GIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 101 (414)
Q Consensus 60 ~i~~~~~~~V~~id~~~~--~V~~~~g~~~~yd~LviAtG~~~~ 101 (414)
+++++++++|++++.+.. +|++.+|+++.+|.||.|+|.+..
T Consensus 140 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 467899999999986543 678889988999999999998653
No 425
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.14 E-value=1 Score=41.24 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+|.|||+|.+|.-+|..|.+.|.+|+++.|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999998764
No 426
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=84.06 E-value=1.2 Score=38.53 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=29.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
..++.|||.|.+|..+|..|.+.|.+|+++.|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999988764
No 427
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=84.05 E-value=0.78 Score=41.96 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+|.|||+|.+|.-+|..|.+.|.+|+++.|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999875
No 428
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=83.99 E-value=1.2 Score=40.60 Aligned_cols=35 Identities=17% Similarity=0.141 Sum_probs=31.1
Q ss_pred CCCeEEEECCCh-HHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~-~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++++|||.|. .|.-+|..|.+.|..||++++..
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 689999999996 69999999999999999997543
No 429
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=83.99 E-value=1.6 Score=38.46 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=31.2
Q ss_pred CCCeEEEECC-----------------ChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 132 KAKKVVVVGG-----------------GYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 132 ~~~~vvVvGg-----------------G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
.+++|+|-|| |.+|..+|..++++|.+|+++.+...+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~ 55 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL 55 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 4788888877 589999999999999999999986543
No 430
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=83.94 E-value=1 Score=42.10 Aligned_cols=77 Identities=16% Similarity=0.248 Sum_probs=49.3
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 213 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 213 (414)
.+|.|||+|.+|.-+|..|++.|.+|+++.|.+ . .+.+++.|+.+..... . .... + .+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~---------~-----~~~~~~~g~~~~~~~~-~-~~~~----~-~~- 61 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA---------T-----LQALQTAGLRLTEDGA-T-HTLP----V-RA- 61 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH---------H-----HHHHHHTCEEEEETTE-E-EEEC----C-EE-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH---------H-----HHHHHHCCCEEecCCC-e-EEEe----e-eE-
Confidence 579999999999999999999999999987631 1 1235667877653211 1 1100 0 11
Q ss_pred eCCC-cEEecCEEEEccCCc
Q 014997 214 LEDG-STIDADTIVIGIGAK 232 (414)
Q Consensus 214 ~~~g-~~i~~D~vi~a~G~~ 232 (414)
..+- ..-++|.||+|+...
T Consensus 62 ~~~~~~~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 62 THDAAALGEQDVVIVAVKAP 81 (335)
T ss_dssp ESCHHHHCCCSEEEECCCHH
T ss_pred ECCHHHcCCCCEEEEeCCch
Confidence 1111 112589999998764
No 431
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=83.93 E-value=0.51 Score=47.89 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=36.1
Q ss_pred CHhHHHHcCCeEEcCCcEEEEeCC-C-CE--EEe---CCCc--EEecCeEEEccCCCC
Q 014997 52 TPEWYKEKGIEMIYQDPVTSIDIE-K-QT--LIT---NSGK--LLKYGSLIVATGCTA 100 (414)
Q Consensus 52 ~~~~~~~~~i~~~~~~~V~~id~~-~-~~--V~~---~~g~--~~~yd~LviAtG~~~ 100 (414)
..+.+++.||+++.+++|+++..+ + +. |.+ .+|+ .+.++.||+|||...
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 345566789999999999998754 3 32 332 4665 589999999999854
No 432
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=83.87 E-value=1.4 Score=43.56 Aligned_cols=47 Identities=17% Similarity=0.278 Sum_probs=37.1
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCc---EEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~---~~~yd~LviAtG~~~ 100 (414)
+.+.+.|++++.+++|++++.+.. +|++.++. ++.+|+||.|.|.+.
T Consensus 115 ~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 115 EWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 334567999999999999976543 56666664 799999999999864
No 433
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=83.84 E-value=1.3 Score=40.52 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=31.8
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 132 KAKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 132 ~~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
..++|+|.|+ |++|..++..|.+.|.+|+.+.|.+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3578999998 99999999999999999999988654
No 434
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=83.81 E-value=1.3 Score=42.13 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=32.0
Q ss_pred cCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 131 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 131 ~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
..+++|.|+|+|..|..++..+.++|.+|.++.+.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 35789999999999999999999999999998865
No 435
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=83.73 E-value=1.2 Score=40.71 Aligned_cols=47 Identities=17% Similarity=0.137 Sum_probs=35.8
Q ss_pred CHHHHHHHHHhh---cCCCeEEEECCCh-HHHHHHHHHHhCCCcEEEEeeC
Q 014997 119 DVADADALISSL---EKAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 119 ~~~~~~~~~~~~---~~~~~vvVvGgG~-~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
|...+..+.+.. -.+++++|||.|. +|.-+|..|.+.|..||++++.
T Consensus 148 Tp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 148 TPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred hHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 334444444432 2689999999995 7999999999999999998643
No 436
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=83.73 E-value=2.3 Score=38.88 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=31.0
Q ss_pred CCCeEEEECCCh-HHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~-~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++++|||.|. .|.-+|..|.+.|..||++++..
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 689999999655 89999999999999999998743
No 437
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=83.66 E-value=1.1 Score=47.56 Aligned_cols=46 Identities=15% Similarity=0.199 Sum_probs=37.3
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC---EEEeCCCcEEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~---~V~~~~g~~~~yd~LviAtG~~~ 100 (414)
+.+++.|++++.+++|++|..++. .|.+++| ++.+|+||+|+|...
T Consensus 159 ~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 159 KRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 455678999999999999987544 3667777 699999999999864
No 438
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=83.62 E-value=1.2 Score=40.75 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~ 165 (414)
.+++++|+|+|.+|..+|..|.+.|. +|+++.|.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 57899999999999999999999997 89988775
No 439
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.61 E-value=0.67 Score=45.47 Aligned_cols=32 Identities=31% Similarity=0.525 Sum_probs=29.7
Q ss_pred eEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
+|+|+|+|..|..+|..|...|.+|+++++.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 69999999999999999999999999998754
No 440
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.52 E-value=1.2 Score=38.23 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=28.9
Q ss_pred eEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 135 KVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 135 ~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
+|+|.|+ |.+|..++..|.+.|.+|+++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5899997 9999999999999999999998754
No 441
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=83.50 E-value=1.4 Score=41.20 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++++.|||.|.+|..+|..|+..|.+|+++.+..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 45789999999999999999999999999887754
No 442
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.49 E-value=1.3 Score=41.80 Aligned_cols=35 Identities=40% Similarity=0.544 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
++++|+|+|+|.+|..++..++.+|.+|+++.+.+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35899999999999999999999999999887754
No 443
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=83.48 E-value=1 Score=43.48 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++|+|+|.|.+|..+|..|+.+|.+|+++++.+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 57999999999999999999999999999887643
No 444
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.46 E-value=1.2 Score=43.95 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=32.5
Q ss_pred hcCCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 130 LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 130 ~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
...+++|+|+|.|.+|..+|..++.+|.+|+++++.+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3478999999999999999999999999988887643
No 445
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=83.40 E-value=1 Score=40.77 Aligned_cols=35 Identities=11% Similarity=0.102 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++++|+|+|-+|..+|..|.+.|.+|+++.|..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 57899999999999999999999999999988753
No 446
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=83.39 E-value=1.4 Score=43.42 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
-++|.|||+|..|.-+|..|++.|.+|+++++.+.-
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~ 40 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEA 40 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 468999999999999999999999999999876543
No 447
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=83.23 E-value=1.3 Score=40.89 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=31.3
Q ss_pred CCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 133 AKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 133 ~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
+++|+|.|+ |++|..++..|.+.|.+|+++.|.+.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 578999997 99999999999999999999987653
No 448
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=83.17 E-value=1.2 Score=44.84 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=37.1
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCC-C---EEEeC--CCc--EEecCeEEEccCCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEK-Q---TLITN--SGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~-~---~V~~~--~g~--~~~yd~LviAtG~~~~ 101 (414)
.+.+++.||+++++++|+++..++ . -|.+. +|+ ++.+|.||+|||....
T Consensus 257 ~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 257 RKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 355667899999999999997654 3 24443 675 6899999999998653
No 449
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=83.12 E-value=0.96 Score=46.40 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=34.1
Q ss_pred HHHHc-CC-eEEcCCcEEEEeCCCC---EE---E---eCCCc--EEecCeEEEccCCCCC
Q 014997 55 WYKEK-GI-EMIYQDPVTSIDIEKQ---TL---I---TNSGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 55 ~~~~~-~i-~~~~~~~V~~id~~~~---~V---~---~~~g~--~~~yd~LviAtG~~~~ 101 (414)
.+++. || +++.++.|+++..+.. .| . +.+|+ .+.++.+|+|||....
T Consensus 160 ~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 160 AAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp HHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 34455 99 9999999999875433 22 1 25665 5899999999998653
No 450
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=83.06 E-value=1.7 Score=43.81 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=36.2
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCC--C--EEEeC--CCc--EEecCeEEEccCCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEK--Q--TLITN--SGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~--~--~V~~~--~g~--~~~yd~LviAtG~~~~ 101 (414)
.+.+++.||+++++++|+++..++ + .|.+. +|+ .+.+|.||+|||....
T Consensus 262 ~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 262 WDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 455667899999999999986543 3 24443 664 6899999999998653
No 451
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=82.96 E-value=1.2 Score=41.22 Aligned_cols=34 Identities=18% Similarity=0.102 Sum_probs=30.8
Q ss_pred CCCeEEEECCCh-HHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~-~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+++++|||.|. +|.-+|..|...|.+|+++.|.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 689999999996 5999999999999999998775
No 452
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=82.75 E-value=1.4 Score=38.61 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=30.9
Q ss_pred CCCeEEEECC-----------------ChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGG-----------------GYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGg-----------------G~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++++|-|| |-+|..+|..|+++|.+|+++.+..
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence 5788999888 7899999999999999999987654
No 453
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=82.70 E-value=1.4 Score=37.84 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=29.0
Q ss_pred eEEEEC-CChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 135 KVVVVG-GGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 135 ~vvVvG-gG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
++.|+| +|.+|..+|..|.+.|.+|+++.|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999987754
No 454
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=82.66 E-value=3.8 Score=37.08 Aligned_cols=58 Identities=24% Similarity=0.442 Sum_probs=40.6
Q ss_pred CCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEc
Q 014997 133 AKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 194 (414)
Q Consensus 133 ~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~ 194 (414)
.++|+|.|+ |.+|..++..|.+.|.+|+++.|...-.. .++..+.+ +.+...|++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~~~~-~~l~~~~v~~v~ 62 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASS---NSEKAQLL-ESFKASGANIVH 62 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTT---THHHHHHH-HHHHTTTCEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCccccc---CHHHHHHH-HHHHhCCCEEEE
Confidence 468999996 99999999999999999999888653210 12222222 334567777764
No 455
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=82.58 E-value=1.5 Score=40.36 Aligned_cols=41 Identities=15% Similarity=0.274 Sum_probs=34.1
Q ss_pred cCCeEEcCCcEEEEeCCCC--EEEeCCCcEEe-cCeEEEccCCC
Q 014997 59 KGIEMIYQDPVTSIDIEKQ--TLITNSGKLLK-YGSLIVATGCT 99 (414)
Q Consensus 59 ~~i~~~~~~~V~~id~~~~--~V~~~~g~~~~-yd~LviAtG~~ 99 (414)
.+++++++++|++++.+.. .|++++|+.+. +|+||+|+|..
T Consensus 118 ~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 118 GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAP 161 (336)
T ss_dssp TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHH
T ss_pred ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHH
Confidence 3899999999999986543 67788887664 99999999974
No 456
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=82.55 E-value=1.3 Score=44.94 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHh-CCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~-~g~~Vtlv~~~~ 166 (414)
-.++|||+|..|+-+|..|++ .|.+|.+++++.
T Consensus 25 ~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 25 YDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999 799999999774
No 457
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=82.54 E-value=1.5 Score=39.87 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=30.4
Q ss_pred CCCeEEEECCCh-HHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~-~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+++++|||.|. .|.-+|..|.+.|..||++++.
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 689999999665 7999999999999999999764
No 458
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=82.49 E-value=1.4 Score=39.83 Aligned_cols=35 Identities=9% Similarity=0.208 Sum_probs=31.1
Q ss_pred cCCCeEEEECCC-hHHHHHHHHHHhCCCcEEEEeeC
Q 014997 131 EKAKKVVVVGGG-YIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 131 ~~~~~vvVvGgG-~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
-.+++++|||.| ..|.-+|..|.+.|..||++++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999976 58999999999999999999753
No 459
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=82.46 E-value=1.6 Score=40.40 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~ 166 (414)
.+++++|+|+|-+|..+|..|++.|. +|+++.|.+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 57899999999999999999999998 899998864
No 460
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=82.44 E-value=1.3 Score=40.72 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
.-.+|.|||.|.+|..+|..|++.|.+|+++.+.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999987653
No 461
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.36 E-value=1.3 Score=41.50 Aligned_cols=33 Identities=21% Similarity=-0.011 Sum_probs=29.7
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+|.|||+|.+|..+|..|++.|.+|+++.+.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999887643
No 462
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=82.30 E-value=1.5 Score=40.32 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=31.1
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
++++|+|.|+ |++|..++..|.+.|.+|+++.|..
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 5688999997 9999999999999999999887753
No 463
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=82.28 E-value=1.7 Score=40.08 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++++.|||.|.+|..+|..|...|.+|+.+.+..
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~ 175 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYP 175 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 46789999999999999999999999998887654
No 464
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=82.25 E-value=1.5 Score=40.45 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC--cEEEEeeCC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~--~Vtlv~~~~ 166 (414)
..+|+|||+|.+|.-+|..|+..|. +|+++.+.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3589999999999999999999998 899987753
No 465
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=82.24 E-value=1.6 Score=40.66 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++++.|||-|.+|..+|..|+..|.+|+.+.+.+
T Consensus 139 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~ 173 (324)
T 3hg7_A 139 KGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSG 173 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCCh
Confidence 36899999999999999999999999999988765
No 466
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=82.23 E-value=1.6 Score=40.78 Aligned_cols=35 Identities=26% Similarity=0.380 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++++.|||.|.+|..+|..|...|.+|+++.+..
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~ 197 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSK 197 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 36789999999999999999999999999887764
No 467
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=82.19 E-value=1.5 Score=43.48 Aligned_cols=47 Identities=17% Similarity=0.249 Sum_probs=36.6
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEeCCCc---EEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~~~g~---~~~yd~LviAtG~~~ 100 (414)
+.+.+.|++++.+++|++++.+.. +|++.++. ++.+|+||.|.|.+.
T Consensus 114 ~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 114 QWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp HHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred HHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 334567999999999999976554 45566664 799999999999864
No 468
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.05 E-value=1.4 Score=43.11 Aligned_cols=35 Identities=20% Similarity=0.375 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
-++|.|||+|..|.-+|..|++.|.+|+++++.+.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 47899999999999999999999999999988764
No 469
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=82.02 E-value=3.9 Score=35.96 Aligned_cols=34 Identities=24% Similarity=0.155 Sum_probs=29.6
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+|.++|.|+ |.+|.++|..|++.|.+|.++.|.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 5688888885 789999999999999999988764
No 470
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=81.99 E-value=1.7 Score=40.15 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++++.|||.|.+|..+|..|...|.+|+.+.+..
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~ 175 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILD 175 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 46899999999999999999999999998887653
No 471
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=81.89 E-value=1.5 Score=39.84 Aligned_cols=34 Identities=24% Similarity=0.216 Sum_probs=30.2
Q ss_pred CCCeEEEECCCh-HHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvGgG~-~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
.+++++|||.|. .|.-+|..|.+.|..||++++.
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 194 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF 194 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 689999999665 7999999999999999998754
No 472
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=81.75 E-value=1.9 Score=43.63 Aligned_cols=47 Identities=23% Similarity=0.355 Sum_probs=37.3
Q ss_pred hHHHHcCCeEEcCCcEEEEeCC-C--CEEEeC-CC--cEEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIE-K--QTLITN-SG--KLLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~-~--~~V~~~-~g--~~~~yd~LviAtG~~~ 100 (414)
+.+++.|++++.+++|+++..+ + ..|++. +| .++.+|.||.|+|...
T Consensus 136 ~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 136 DEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 3455689999999999999865 3 256666 66 5799999999999864
No 473
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=81.74 E-value=1.8 Score=40.26 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=32.7
Q ss_pred cCCCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 131 EKAKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 131 ~~~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
..+++|+|.|+ |++|..++..|.+.|.+|+.+.|...
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 36789999995 99999999999999999999988653
No 474
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=81.73 E-value=1.1 Score=45.31 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHHhCC-CcEEEEeeCCc
Q 014997 135 KVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENH 167 (414)
Q Consensus 135 ~vvVvGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~ 167 (414)
.++|||+|..||-+|..|++.+ .+|.|+++++.
T Consensus 8 DyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 8 DFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 6899999999999999999987 69999998865
No 475
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=81.71 E-value=1.8 Score=39.95 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++++.|||.|.+|..+|..|...|.+|+.+.+..
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~ 177 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTP 177 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45789999999999999999999999999887754
No 476
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=81.69 E-value=1.7 Score=39.50 Aligned_cols=35 Identities=31% Similarity=0.320 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~ 166 (414)
.+++++|+|+|-+|..++..|.+.|. +|+++.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 57899999999999999999999998 699887753
No 477
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=81.63 E-value=1.7 Score=41.19 Aligned_cols=33 Identities=12% Similarity=-0.008 Sum_probs=29.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEee
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP 164 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~ 164 (414)
.+++|+|+|.|.+|..+|..|.+.|.+|++.++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 679999999999999999999999999886653
No 478
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=81.62 E-value=1.2 Score=44.79 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHhC-CCcEEEEeeCC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPEN 166 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 166 (414)
-.++|||+|..|+-+|..|++. +.+|.+++++.
T Consensus 14 ~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 14 FDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 4699999999999999999998 89999999874
No 479
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=81.60 E-value=2.9 Score=38.48 Aligned_cols=33 Identities=18% Similarity=0.058 Sum_probs=29.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPE 165 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~ 165 (414)
..+|.|||.|..|.-+|..|.+.|. +|+++.+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3689999999999999999999998 89988775
No 480
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=81.58 E-value=1.2 Score=38.46 Aligned_cols=35 Identities=23% Similarity=0.510 Sum_probs=31.2
Q ss_pred CeEEEEC-CChHHHHHHHHHHhCCCcEEEEeeCCcc
Q 014997 134 KKVVVVG-GGYIGMEVAAAAVGWKLDTTIIFPENHL 168 (414)
Q Consensus 134 ~~vvVvG-gG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 168 (414)
++|+|.| +|.+|..++..|.+.|.+|+++.|.+.-
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 6899999 4999999999999999999999887543
No 481
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=81.54 E-value=1.9 Score=40.01 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
.++++.|||-|.+|..+|..|...|.+|..+.+.+.
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 171 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGH 171 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 368999999999999999999999999999887654
No 482
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.48 E-value=1 Score=40.87 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
++|.|||.|.+|..+|..|++.|.+|+++.|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999987653
No 483
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=81.38 E-value=1.4 Score=43.13 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
-++|.|||+|..|.-+|..|++.|.+|+++++.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36799999999999999999999999999987654
No 484
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=81.36 E-value=1.3 Score=39.54 Aligned_cols=35 Identities=31% Similarity=0.227 Sum_probs=30.7
Q ss_pred CCCeEEEECC-Ch-HHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGG-GY-IGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGg-G~-~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++.++|.|+ |. +|.++|..|++.|.+|.++.|..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 5789999998 75 99999999999999999887754
No 485
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=81.32 E-value=1.1 Score=45.25 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=37.3
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCCC--EEEe--CCC-cEEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEKQ--TLIT--NSG-KLLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~~--~V~~--~~g-~~~~yd~LviAtG~~~ 100 (414)
+.+++.|++++.+++|++++.+.. +|++ .+| +++.+|+||.|.|.+.
T Consensus 156 ~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 156 EHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 334556999999999999987654 5555 678 6899999999999864
No 486
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=81.32 E-value=0.92 Score=46.32 Aligned_cols=49 Identities=12% Similarity=0.102 Sum_probs=35.5
Q ss_pred HhHHHHcCCeEEcCCcEEEEeCCCCE---EEe---CCCc--EEecCeEEEccCCCCC
Q 014997 53 PEWYKEKGIEMIYQDPVTSIDIEKQT---LIT---NSGK--LLKYGSLIVATGCTAS 101 (414)
Q Consensus 53 ~~~~~~~~i~~~~~~~V~~id~~~~~---V~~---~~g~--~~~yd~LviAtG~~~~ 101 (414)
.+.+.+.||+++.++.|+++..++.. |.+ .+|+ .+.++.||+|||....
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 34455679999999999998654432 232 4665 6899999999998643
No 487
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=81.29 E-value=1.5 Score=40.05 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=30.6
Q ss_pred CCeEEEEC-CChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 133 AKKVVVVG-GGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvG-gG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++|.||| .|.+|..+|..|++.|.+|+++.+.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35899999 99999999999999999999997654
No 488
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=81.29 E-value=1.4 Score=43.37 Aligned_cols=35 Identities=14% Similarity=0.274 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
..-+|.|||.|.+|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999998764
No 489
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=81.27 E-value=1.8 Score=39.26 Aligned_cols=34 Identities=32% Similarity=0.365 Sum_probs=31.0
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 132 KAKKVVVVG-GGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 132 ~~~~vvVvG-gG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
++++++|+| +|.+|..+|..|.+.|.+|+++.|.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 578999999 8999999999999999999888775
No 490
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=81.25 E-value=1.2 Score=40.49 Aligned_cols=36 Identities=11% Similarity=0.080 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCCc
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH 167 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~ 167 (414)
.+++++|+|+|-+|.-+|..|.+.|. +|+++.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 57899999999999999999999998 8999988653
No 491
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=81.20 E-value=4.1 Score=37.33 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeC
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 165 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~ 165 (414)
++|-+||-|..|.-+|..|.+.|.+|+++.|.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCC
Confidence 68999999999999999999999999999877
No 492
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=81.20 E-value=1.6 Score=39.93 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=28.5
Q ss_pred CCeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 133 AKKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
+++|+|.|+ |++|..++..|.+.|.+|+++.|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 468999997 9999999999999999999988643
No 493
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=81.19 E-value=0.45 Score=46.88 Aligned_cols=73 Identities=15% Similarity=0.071 Sum_probs=51.6
Q ss_pred CeEEEECCChHHHHHHHHHHhCCCcEEEEeeCCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q 014997 134 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 213 (414)
Q Consensus 134 ~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 213 (414)
..|.|.|.|-+|+ |..|.++|.+|+..+.... +.. +.|++.|++++.+.. .+ .
T Consensus 16 h~i~I~G~G~sgl--A~~l~~~G~~V~g~D~~~~-------~~~-----~~L~~~gi~~~~g~~-------~~-~----- 68 (469)
T 1j6u_A 16 HFVGIGGIGMSAV--ALHEFSNGNDVYGSNIEET-------ERT-----AYLRKLGIPIFVPHS-------AD-N----- 68 (469)
T ss_dssp EEETTTSHHHHHH--HHHHHHTTCEEEEECSSCC-------HHH-----HHHHHTTCCEESSCC-------TT-S-----
T ss_pred EEEEEcccCHHHH--HHHHHhCCCEEEEEcCCCC-------HHH-----HHHHhCCCEEECCCC-------HH-H-----
Confidence 4577888899988 8999999999999876542 111 346778999886531 01 0
Q ss_pred eCCCcEEecCEEEEccCCcCCChhh
Q 014997 214 LEDGSTIDADTIVIGIGAKPTVSPF 238 (414)
Q Consensus 214 ~~~g~~i~~D~vi~a~G~~p~~~~l 238 (414)
+ -.+|+||.++|..++.+.+
T Consensus 69 ~-----~~~d~vV~spgi~~~~p~~ 88 (469)
T 1j6u_A 69 W-----YDPDLVIKTPAVRDDNPEI 88 (469)
T ss_dssp C-----CCCSEEEECTTCCTTCHHH
T ss_pred C-----CCCCEEEECCCcCCCCHHH
Confidence 1 1479999999998866543
No 494
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=81.17 E-value=1.6 Score=39.92 Aligned_cols=34 Identities=26% Similarity=0.140 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
..+|.|||.|.+|.-+|..|++.|.+|+++.+.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999987654
No 495
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=81.02 E-value=1.5 Score=40.88 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++++.|||.|.+|..+|..|+..|.+|+++.+..
T Consensus 145 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 145 YGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 46789999999999999999999999998887654
No 496
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=81.01 E-value=1.5 Score=40.50 Aligned_cols=35 Identities=26% Similarity=0.322 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhCCC-cEEEEeeCCc
Q 014997 133 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH 167 (414)
Q Consensus 133 ~~~vvVvGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~ 167 (414)
..+|.|||+|.+|.-+|..|+..|. +|+++++.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 4689999999999999999999887 8999987654
No 497
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.99 E-value=3.3 Score=36.80 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=29.6
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVG-GGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvG-gG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.++.++|.| +|.+|.++|..|++.|.+|.++.|..
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 567888887 48899999999999999998887643
No 498
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=80.97 E-value=2.3 Score=43.01 Aligned_cols=47 Identities=26% Similarity=0.309 Sum_probs=35.9
Q ss_pred hHHHHcCCeEEcCCcEEEEeCCC--CE--EEeC------CC---------cEEecCeEEEccCCCC
Q 014997 54 EWYKEKGIEMIYQDPVTSIDIEK--QT--LITN------SG---------KLLKYGSLIVATGCTA 100 (414)
Q Consensus 54 ~~~~~~~i~~~~~~~V~~id~~~--~~--V~~~------~g---------~~~~yd~LviAtG~~~ 100 (414)
+.+++.|++++.+++|+++..+. +. |.+. +| .++.+|+||+|+|.+.
T Consensus 152 ~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 152 EQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 34456799999999999987653 32 5555 33 5799999999999874
No 499
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=80.96 E-value=1.7 Score=42.91 Aligned_cols=35 Identities=23% Similarity=0.193 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhCCCcEEEEeeCC
Q 014997 132 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 166 (414)
Q Consensus 132 ~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 166 (414)
.+++|+|||.|.+|..+|..|+.+|.+|+++++.+
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~ 310 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDP 310 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 67999999999999999999999999999987653
No 500
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=80.93 E-value=1.9 Score=37.82 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=29.9
Q ss_pred CeEEEECC-ChHHHHHHHHHHhCCCcEEEEeeCCc
Q 014997 134 KKVVVVGG-GYIGMEVAAAAVGWKLDTTIIFPENH 167 (414)
Q Consensus 134 ~~vvVvGg-G~~g~e~A~~l~~~g~~Vtlv~~~~~ 167 (414)
++++|.|+ |.+|..+|..|.+.|.+|+++.|.+.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 46888886 99999999999999999999988754
Done!