Query 015003
Match_columns 414
No_of_seqs 130 out of 1604
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 04:57:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dd5_A Acetyl-COA acetyltransf 100.0 5.9E-67 2E-71 523.8 41.0 390 12-403 6-396 (396)
2 3ss6_A Acetyl-COA acetyltransf 100.0 3.6E-66 1.2E-70 517.9 39.2 390 11-403 3-393 (394)
3 4e1l_A Acetoacetyl-COA thiolas 100.0 4.4E-66 1.5E-70 517.6 38.8 392 11-403 3-395 (395)
4 1ulq_A Putative acetyl-COA ace 100.0 4.5E-65 1.6E-69 511.1 39.7 390 13-404 2-400 (401)
5 2vu1_A Acetyl-COA acetyltransf 100.0 4.4E-65 1.5E-69 509.9 39.2 388 12-403 2-391 (392)
6 1wl4_A Acetyl-coenzyme A acety 100.0 4.3E-64 1.5E-68 503.4 40.7 388 13-403 6-396 (397)
7 3goa_A 3-ketoacyl-COA thiolase 100.0 6.2E-64 2.1E-68 500.3 39.9 378 12-403 1-386 (387)
8 2wu9_A 3-ketoacyl-COA thiolase 100.0 5.1E-64 1.7E-68 507.3 35.0 385 11-407 28-422 (442)
9 1afw_A 3-ketoacetyl-COA thiola 100.0 1.9E-63 6.7E-68 497.5 37.0 383 6-403 3-392 (393)
10 1wdk_C 3-ketoacyl-COA thiolase 100.0 1.9E-62 6.6E-67 490.3 37.5 377 11-403 3-389 (390)
11 3svk_A Acetyl-COA acetyltransf 100.0 3.3E-62 1.1E-66 490.3 37.8 377 11-403 5-406 (407)
12 2ib8_A Acetyl-COA acetyltransf 100.0 6.1E-62 2.1E-66 487.7 37.3 388 11-403 6-394 (395)
13 2iik_A 3-ketoacyl-COA thiolase 100.0 9.5E-61 3.3E-65 481.5 37.6 381 12-404 29-416 (418)
14 4egv_A Acetyl-COA acetyltransf 100.0 1.8E-48 6.3E-53 400.9 20.4 366 12-405 17-424 (520)
15 1e5m_A KAS II, beta ketoacyl a 100.0 1.4E-33 4.7E-38 284.0 24.7 270 39-404 79-415 (416)
16 3ho9_A 3-oxoacyl-[acyl-carrier 100.0 2.8E-33 9.6E-38 282.5 21.3 271 37-403 88-426 (427)
17 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 1E-32 3.5E-37 278.4 25.0 275 36-405 86-427 (428)
18 3o04_A LMO2201 protein, beta-k 100.0 4.1E-32 1.4E-36 273.0 27.5 272 37-405 74-412 (413)
19 4ddo_A 3-oxoacyl-[acyl-carrier 100.0 1.5E-32 5.1E-37 279.0 24.3 274 37-406 102-444 (451)
20 3mqd_A Beta-ketoacyl synthase; 100.0 7.7E-32 2.6E-36 272.1 27.6 270 36-404 91-426 (428)
21 1j3n_A 3-oxoacyl-(acyl-carrier 100.0 8.9E-33 3E-37 277.4 20.1 272 36-403 70-407 (408)
22 2gqd_A 3-oxoacyl-[acyl-carrier 100.0 1E-31 3.6E-36 271.7 26.0 272 37-405 98-436 (437)
23 2iwz_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-31 3.8E-36 271.6 24.7 270 37-403 97-437 (438)
24 4ewg_A Beta-ketoacyl synthase; 100.0 2.1E-31 7.1E-36 267.7 26.1 268 37-404 77-411 (412)
25 1tqy_A Beta-ketoacyl synthase/ 100.0 4.4E-31 1.5E-35 266.4 25.7 272 38-405 74-418 (424)
26 1tqy_B Actinorhodin polyketide 100.0 8.1E-31 2.8E-35 263.7 26.6 271 36-406 78-413 (415)
27 2wge_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-30 3.8E-35 262.6 24.8 266 38-403 84-415 (416)
28 2gp6_A 3-oxoacyl-[acyl-carrier 100.0 7.5E-30 2.6E-34 257.7 28.9 269 37-403 99-433 (434)
29 2ix4_A 3-oxoacyl-[acyl-carrier 100.0 1.4E-30 4.8E-35 263.1 23.0 273 36-403 87-430 (431)
30 1ox0_A Beta ketoacyl-acyl carr 100.0 1.2E-29 4.1E-34 256.2 27.6 268 38-405 94-428 (430)
31 2vba_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-29 3.9E-34 254.6 23.2 269 36-405 70-405 (406)
32 1zow_A 3-oxoacyl-[acyl-carrier 100.0 8.4E-30 2.9E-34 246.7 19.7 258 22-403 36-311 (313)
33 4dfe_A 3-oxoacyl-[acyl-carrier 100.0 7.3E-29 2.5E-33 242.4 22.2 253 22-402 50-332 (333)
34 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 9.9E-29 3.4E-33 238.7 21.9 240 35-402 48-308 (309)
35 2qo3_A Eryaii erythromycin pol 100.0 3.5E-28 1.2E-32 265.0 28.8 268 37-405 95-432 (915)
36 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 4.4E-29 1.5E-33 242.7 18.6 258 23-405 36-321 (322)
37 2hg4_A DEBS, 6-deoxyerythronol 100.0 5.4E-28 1.8E-32 263.6 27.4 268 38-406 117-455 (917)
38 3il3_A 3-oxoacyl-[acyl-carrier 100.0 7.1E-28 2.4E-32 234.2 25.1 252 22-402 43-322 (323)
39 1u6e_A 3-oxoacyl-[acyl-carrier 100.0 1.5E-28 5E-33 240.3 20.1 249 30-403 54-332 (335)
40 4efi_A 3-oxoacyl-(acyl-carrier 100.0 1.2E-27 4E-32 235.6 21.9 260 23-406 52-346 (354)
41 1hnj_A Beta-ketoacyl-acyl carr 100.0 5.1E-28 1.7E-32 234.7 18.7 255 23-402 37-316 (317)
42 3s21_A 3-oxoacyl-[ACP] synthas 100.0 4.7E-28 1.6E-32 237.8 18.4 269 26-403 57-345 (345)
43 3gwa_A 3-oxoacyl-(acyl-carrier 100.0 1.8E-27 6.1E-32 235.2 21.6 258 23-402 66-364 (365)
44 1mzj_A Beta-ketoacylsynthase I 100.0 1.1E-27 3.7E-32 234.6 19.8 250 32-406 55-334 (339)
45 4ewp_A 3-oxoacyl-[acyl-carrier 100.0 3.1E-27 1.1E-31 232.4 21.6 257 23-403 48-349 (350)
46 3h78_A PQS biosynthetic enzyme 100.0 2.4E-27 8.2E-32 233.7 19.2 257 24-407 61-355 (359)
47 2x3e_A 3-oxoacyl-[acyl-carrier 99.9 1.6E-27 5.5E-32 232.7 17.0 246 35-408 51-328 (331)
48 3hhd_A Fatty acid synthase; tr 99.9 1.7E-26 5.9E-31 252.7 25.8 264 38-406 81-411 (965)
49 1u0m_A Putative polyketide syn 99.9 1.1E-27 3.7E-32 238.3 13.4 252 34-406 81-357 (382)
50 1ted_A PKS18; thiolase fold, s 99.9 1.9E-27 6.4E-32 237.5 11.9 255 35-404 111-391 (393)
51 2h84_A Steely1; thiolase-fold, 99.9 5.1E-27 1.8E-31 232.9 13.7 250 35-404 93-373 (374)
52 3led_A 3-oxoacyl-acyl carrier 99.9 1.8E-25 6.3E-30 222.4 21.2 240 36-403 116-391 (392)
53 3il6_A 3-oxoacyl-[acyl-carrier 99.9 1.4E-25 4.7E-30 218.0 19.7 249 23-402 39-320 (321)
54 3s3l_A CERJ; acyltransferase, 99.9 1.4E-25 4.7E-30 221.0 18.3 259 21-406 36-341 (357)
55 3zen_D Fatty acid synthase; tr 99.9 1.7E-25 5.9E-30 263.7 22.4 280 36-407 2646-3014(3089)
56 2d3m_A Pentaketide chromone sy 99.9 1E-24 3.5E-29 218.5 21.0 253 35-404 113-403 (406)
57 3ov2_A Curcumin synthase; type 99.9 4.1E-25 1.4E-29 220.2 17.6 255 36-405 101-388 (393)
58 3oit_A OS07G0271500 protein; t 99.9 3.1E-25 1E-29 220.7 16.1 251 36-404 95-382 (387)
59 3v7i_A Putative polyketide syn 99.9 1.6E-24 5.6E-29 216.4 18.2 257 21-403 122-412 (413)
60 3a5r_A Benzalacetone synthase; 99.9 2.2E-24 7.6E-29 214.8 19.2 256 35-407 96-386 (387)
61 1i88_A CHS2, chalcone synthase 99.9 5.6E-24 1.9E-28 212.0 20.1 254 35-404 100-387 (389)
62 3tsy_A Fusion protein 4-coumar 99.9 3.6E-24 1.2E-28 236.9 20.3 259 37-407 689-977 (979)
63 3awk_A Chalcone synthase-like 99.9 7.3E-24 2.5E-28 211.9 19.9 254 35-404 113-400 (402)
64 3euo_A Type III pentaketide sy 99.9 3.7E-24 1.2E-28 212.4 17.3 257 36-403 80-378 (379)
65 1ee0_A 2-pyrone synthase; poly 99.9 5E-24 1.7E-28 213.2 18.4 255 35-406 105-394 (402)
66 2p0u_A Stilbenecarboxylate syn 99.9 4.6E-24 1.6E-28 214.1 17.7 254 35-404 118-405 (413)
67 2uv8_A Fatty acid synthase sub 99.9 1.4E-23 4.8E-28 237.3 23.0 279 37-406 1211-1660(1887)
68 1xes_A Dihydropinosylvin synth 99.9 9.6E-24 3.3E-28 211.8 18.5 252 36-404 124-410 (413)
69 3e1h_A PKSIIINC, putative unch 99.9 1.1E-23 3.6E-28 213.3 18.5 257 38-405 111-409 (465)
70 2uv9_A Fatty acid synthase alp 99.9 1.5E-23 5.1E-28 236.6 20.6 279 37-406 1186-1641(1878)
71 2pff_A Fatty acid synthase sub 99.9 1.5E-24 5.2E-29 237.8 11.6 280 36-406 1011-1461(1688)
72 1xpm_A 3-hydroxy-3-methylgluta 99.9 1.5E-23 5.3E-28 209.2 13.4 254 24-406 38-321 (396)
73 3lma_A Stage V sporulation pro 99.9 2.7E-23 9.3E-28 199.6 12.2 249 35-406 53-336 (347)
74 3v4n_A HMG-COA synthase; hydro 99.9 5.6E-23 1.9E-27 204.1 14.4 244 31-406 50-327 (388)
75 3sqz_A Putative hydroxymethylg 99.9 9.2E-23 3.1E-27 204.3 13.5 243 32-406 80-357 (425)
76 2v4w_A Hydroxymethylglutaryl-C 99.9 5E-22 1.7E-26 199.7 17.4 98 33-130 50-151 (460)
77 2f82_A HMG-COA synthase; HMGS1 99.9 1.8E-21 6.1E-26 197.2 20.7 248 33-406 48-372 (450)
78 2vz8_A Fatty acid synthase; tr 99.9 1.2E-21 4.2E-26 231.8 22.3 262 39-405 80-408 (2512)
79 2p8u_A Hydroxymethylglutaryl-C 99.8 2.1E-20 7.3E-25 190.2 17.2 247 33-406 69-399 (478)
80 2wya_A Hydroxymethylglutaryl-C 99.7 6.9E-18 2.4E-22 171.4 13.4 102 25-126 42-145 (460)
81 4ewp_A 3-oxoacyl-[acyl-carrier 94.4 0.21 7.2E-06 47.9 10.4 95 304-406 66-182 (350)
82 3il6_A 3-oxoacyl-[acyl-carrier 93.8 0.3 1E-05 46.2 10.3 96 304-406 56-172 (321)
83 4efi_A 3-oxoacyl-(acyl-carrier 93.5 0.37 1.3E-05 46.4 10.3 97 304-406 70-187 (354)
84 3il3_A 3-oxoacyl-[acyl-carrier 93.2 0.47 1.6E-05 45.0 10.3 95 304-405 62-177 (323)
85 4dfe_A 3-oxoacyl-[acyl-carrier 93.0 0.46 1.6E-05 45.1 10.1 96 304-405 69-185 (333)
86 3gwa_A 3-oxoacyl-(acyl-carrier 92.5 0.52 1.8E-05 45.5 9.7 97 304-406 84-201 (365)
87 3s21_A 3-oxoacyl-[ACP] synthas 92.1 0.81 2.8E-05 43.7 10.5 78 304-387 72-154 (345)
88 3lma_A Stage V sporulation pro 92.0 0.27 9.1E-06 47.1 6.7 90 40-131 208-312 (347)
89 2ebd_A 3-oxoacyl-[acyl-carrier 91.4 0.75 2.6E-05 42.9 9.3 95 304-405 54-169 (309)
90 3v7i_A Putative polyketide syn 91.4 0.53 1.8E-05 46.4 8.4 77 305-386 142-222 (413)
91 3led_A 3-oxoacyl-acyl carrier 91.2 0.68 2.3E-05 45.2 9.0 94 304-405 121-235 (392)
92 3tsy_A Fusion protein 4-coumar 91.0 0.66 2.3E-05 50.8 9.6 97 305-406 694-816 (979)
93 3euo_A Type III pentaketide sy 90.9 0.6 2.1E-05 45.3 8.2 70 305-379 86-159 (379)
94 1ub7_A 3-oxoacyl-[acyl-carrier 89.8 1.2 4.1E-05 41.8 9.1 94 304-405 54-168 (322)
95 1u6e_A 3-oxoacyl-[acyl-carrier 89.8 1.2 4E-05 42.1 9.1 95 304-405 65-180 (335)
96 3e1h_A PKSIIINC, putative unch 89.4 0.92 3.1E-05 45.4 8.2 77 305-386 115-199 (465)
97 3oit_A OS07G0271500 protein; t 89.2 0.92 3.2E-05 44.2 8.0 77 305-387 101-182 (387)
98 3ov2_A Curcumin synthase; type 89.1 1 3.4E-05 44.0 8.2 76 305-386 107-187 (393)
99 3h78_A PQS biosynthetic enzyme 89.0 0.97 3.3E-05 43.5 7.9 95 304-405 78-195 (359)
100 2v4w_A Hydroxymethylglutaryl-C 89.0 0.57 2E-05 46.7 6.4 132 269-405 19-174 (460)
101 1ee0_A 2-pyrone synthase; poly 88.7 1 3.4E-05 44.1 7.9 75 305-386 112-192 (402)
102 2x3e_A 3-oxoacyl-[acyl-carrier 88.5 0.93 3.2E-05 42.9 7.3 83 39-129 224-313 (331)
103 1hnj_A Beta-ketoacyl-acyl carr 87.6 1.6 5.3E-05 40.9 8.2 95 304-405 55-170 (317)
104 3awk_A Chalcone synthase-like 87.4 1.4 4.7E-05 43.1 7.9 75 305-386 120-200 (402)
105 1u0m_A Putative polyketide syn 87.4 1.6 5.4E-05 42.3 8.3 77 305-386 89-169 (382)
106 4e1l_A Acetoacetyl-COA thiolas 87.1 1.8 6.2E-05 42.0 8.6 78 305-388 34-116 (395)
107 3a5r_A Benzalacetone synthase; 87.0 1.3 4.4E-05 43.0 7.4 75 305-386 103-183 (387)
108 1zow_A 3-oxoacyl-[acyl-carrier 86.9 1.5 5.2E-05 40.9 7.6 95 304-405 55-170 (313)
109 1xes_A Dihydropinosylvin synth 86.7 1.2 4.3E-05 43.6 7.2 76 305-386 130-210 (413)
110 1i88_A CHS2, chalcone synthase 86.6 1.5 5.3E-05 42.5 7.8 76 305-386 107-187 (389)
111 2d3m_A Pentaketide chromone sy 86.2 1.7 5.8E-05 42.5 7.8 76 305-386 120-200 (406)
112 2p0u_A Stilbenecarboxylate syn 86.1 1.7 5.8E-05 42.6 7.8 76 305-386 125-205 (413)
113 4dd5_A Acetyl-COA acetyltransf 86.0 2.4 8.1E-05 41.3 8.8 78 305-388 36-118 (396)
114 2h84_A Steely1; thiolase-fold, 86.0 1.7 5.8E-05 41.8 7.7 77 305-386 100-180 (374)
115 2iik_A 3-ketoacyl-COA thiolase 85.6 4 0.00014 40.0 10.3 78 305-388 60-142 (418)
116 2f82_A HMG-COA synthase; HMGS1 85.6 2.1 7.3E-05 42.4 8.3 97 304-405 56-172 (450)
117 3s3l_A CERJ; acyltransferase, 85.4 1.7 5.8E-05 41.7 7.3 76 304-386 58-141 (357)
118 1mzj_A Beta-ketoacylsynthase I 85.3 1.7 5.9E-05 41.1 7.3 95 304-405 64-179 (339)
119 1ted_A PKS18; thiolase fold, s 84.1 1.5 5E-05 42.7 6.2 75 305-386 118-198 (393)
120 3ss6_A Acetyl-COA acetyltransf 83.4 2.6 8.7E-05 41.0 7.6 77 305-387 34-115 (394)
121 2p8u_A Hydroxymethylglutaryl-C 83.2 2.7 9.3E-05 42.1 7.9 97 304-405 77-193 (478)
122 2wu9_A 3-ketoacyl-COA thiolase 81.0 4.9 0.00017 39.7 8.7 78 305-388 60-143 (442)
123 3goa_A 3-ketoacyl-COA thiolase 80.8 5.1 0.00017 38.8 8.6 78 305-388 32-116 (387)
124 3o04_A LMO2201 protein, beta-k 80.0 13 0.00044 36.1 11.4 76 305-388 79-189 (413)
125 1ulq_A Putative acetyl-COA ace 79.9 4 0.00014 39.7 7.6 77 305-387 31-113 (401)
126 2w6k_A COBE; biosynthetic prot 79.6 3.7 0.00013 34.0 6.2 59 16-87 12-70 (145)
127 2gel_A Putative GRAM negative 75.9 1.9 6.6E-05 38.7 3.7 57 36-96 33-93 (231)
128 2vu1_A Acetyl-COA acetyltransf 75.9 5.4 0.00018 38.6 7.2 78 305-388 32-114 (392)
129 4egv_A Acetyl-COA acetyltransf 75.5 3.6 0.00012 41.6 6.0 76 305-387 47-139 (520)
130 1wl4_A Acetyl-coenzyme A acety 75.4 7.9 0.00027 37.5 8.2 77 305-387 35-116 (397)
131 3svk_A Acetyl-COA acetyltransf 75.2 2.6 8.8E-05 41.3 4.7 77 305-387 37-120 (407)
132 2wya_A Hydroxymethylglutaryl-C 74.8 4.5 0.00015 40.2 6.4 42 304-345 58-104 (460)
133 3r6m_A YEAZ, resuscitation pro 72.9 1.8 6.2E-05 38.4 2.6 57 36-96 34-94 (213)
134 2ib8_A Acetyl-COA acetyltransf 71.6 9.5 0.00033 36.8 7.8 98 285-388 10-119 (395)
135 1e5m_A KAS II, beta ketoacyl a 71.2 18 0.00061 35.1 9.7 75 305-387 82-191 (416)
136 2a6a_A Hypothetical protein TM 70.8 1.9 6.4E-05 38.5 2.2 58 35-96 43-104 (218)
137 2gqd_A 3-oxoacyl-[acyl-carrier 70.5 18 0.00061 35.4 9.6 76 305-388 103-213 (437)
138 1afw_A 3-ketoacetyl-COA thiola 69.5 10 0.00036 36.6 7.5 77 305-388 40-126 (393)
139 3sqz_A Putative hydroxymethylg 69.0 4.3 0.00015 39.9 4.6 94 305-406 90-201 (425)
140 1wdk_C 3-ketoacyl-COA thiolase 68.8 7.7 0.00026 37.5 6.4 77 305-387 35-118 (390)
141 3v4n_A HMG-COA synthase; hydro 64.0 5.2 0.00018 38.8 4.0 94 305-406 61-172 (388)
142 3kzu_A 3-oxoacyl-(acyl-carrier 63.7 6.7 0.00023 38.4 4.9 77 39-117 293-376 (428)
143 1ox0_A Beta ketoacyl-acyl carr 62.7 36 0.0012 33.1 10.0 74 305-386 98-206 (430)
144 1j3n_A 3-oxoacyl-(acyl-carrier 61.6 30 0.001 33.3 9.1 75 305-387 76-185 (408)
145 1tqy_B Actinorhodin polyketide 60.1 25 0.00087 34.0 8.3 74 305-387 84-192 (415)
146 3ho9_A 3-oxoacyl-[acyl-carrier 57.1 49 0.0017 32.1 9.8 75 305-387 93-202 (427)
147 1xpm_A 3-hydroxy-3-methylgluta 56.2 6.7 0.00023 38.0 3.3 25 40-64 208-232 (396)
148 3eno_A Putative O-sialoglycopr 55.6 15 0.00052 34.6 5.6 30 38-67 53-82 (334)
149 2qo3_A Eryaii erythromycin pol 53.5 41 0.0014 36.4 9.2 99 15-117 264-373 (915)
150 4ewg_A Beta-ketoacyl synthase; 50.8 55 0.0019 31.5 8.9 75 305-387 82-192 (412)
151 1tqy_A Beta-ketoacyl synthase/ 48.8 67 0.0023 31.0 9.2 75 305-387 78-193 (424)
152 2ix4_A 3-oxoacyl-[acyl-carrier 48.5 47 0.0016 32.3 8.1 76 304-387 92-203 (431)
153 3mqd_A Beta-ketoacyl synthase; 48.3 34 0.0012 33.3 7.0 76 305-388 97-207 (428)
154 4ddo_A 3-oxoacyl-[acyl-carrier 47.6 66 0.0022 31.5 9.0 75 305-387 107-217 (451)
155 2iwz_A 3-oxoacyl-[acyl-carrier 46.0 56 0.0019 31.9 8.2 75 305-387 102-212 (438)
156 2ivn_A O-sialoglycoprotein end 43.5 13 0.00043 35.1 2.9 29 39-67 49-77 (330)
157 2hg4_A DEBS, 6-deoxyerythronol 40.2 27 0.00092 37.8 5.2 100 15-117 286-395 (917)
158 3ven_A O-carbamoyltransferase 31.9 21 0.00073 36.3 2.5 28 303-330 51-78 (576)
159 3eeq_A Putative cobalamin bios 31.0 46 0.0016 31.4 4.5 56 14-87 208-263 (336)
160 2gp6_A 3-oxoacyl-[acyl-carrier 29.3 1.6E+02 0.0056 28.4 8.4 74 305-386 104-210 (434)
161 2wge_A 3-oxoacyl-[acyl-carrier 28.9 2.1E+02 0.0072 27.4 9.1 41 338-386 154-194 (416)
162 1xho_A Chorismate mutase; sout 28.7 1.4E+02 0.0048 24.4 6.3 58 36-96 44-105 (148)
163 3nq4_A 6,7-dimethyl-8-ribityll 28.4 1.1E+02 0.0038 25.3 5.9 30 35-64 24-54 (156)
164 1iv3_A 2-C-methyl-D-erythritol 26.7 97 0.0033 25.5 5.2 59 27-88 63-124 (152)
165 2vba_A 3-oxoacyl-[acyl-carrier 26.4 66 0.0023 30.9 4.9 28 360-387 160-187 (406)
166 3hhd_A Fatty acid synthase; tr 26.0 73 0.0025 34.6 5.6 75 305-387 85-187 (965)
167 3zyy_X Iron-sulfur cluster bin 23.8 88 0.003 32.2 5.4 66 34-103 506-575 (631)
168 3ven_A O-carbamoyltransferase 23.4 45 0.0015 34.0 3.1 27 40-66 51-77 (576)
169 3by5_A Cobalamin biosynthesis 22.5 1E+02 0.0035 25.5 4.6 59 13-87 8-66 (155)
170 1dbf_A Protein (chorismate mut 22.1 1.6E+02 0.0056 23.4 5.5 55 39-96 18-77 (127)
No 1
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=5.9e-67 Score=523.83 Aligned_cols=390 Identities=45% Similarity=0.697 Sum_probs=360.5
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
|++|+|||+++|||+++++.+++.+..+|+.+|+++||+|+|+++++||.+++|+.++++..++.+.+++..+|+++.+|
T Consensus 6 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 85 (396)
T 4dd5_A 6 MREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP 85 (396)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce
Confidence 47999999999999999888889999999999999999999999999999999999988888999999999999986799
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (414)
+++++.+|+|++.+|..|+.+|++|.+|+|||+|+|.++..|+.....+.+..++.....+++..+++++||.+..|++.
T Consensus 86 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (396)
T 4dd5_A 86 AMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGIT 165 (396)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHH
T ss_pred EEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999998876544444444554445555666788899888899999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (414)
|++|+++||+|+|++++|++++|+++..|+.++.|.+||+|++++.+.+. ..+++|+.+|+ +|.|+++++||+|+++
T Consensus 166 a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~l~~~~~v~~p~ 243 (396)
T 4dd5_A 166 AENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGD--TVVDKDEYIKPGTTMEKLAKLRPAFKKD 243 (396)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----C--EEECSCSCCCTTCCHHHHHHCCBSSSTT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCc--eeecCcccccCCCCHHHHhhCCCccCCC
Confidence 99999999999999999999999999999999999999999998877653 35899999998 9999999999999989
Q ss_pred CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
|++|++|||+++|||+++||++.+.+++++.+++++|.|++...+.|..+..++..+++++|+++|++++|||++|+||+
T Consensus 244 g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 323 (396)
T 4dd5_A 244 GTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEA 323 (396)
T ss_dssp CSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred CCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCEEEecCh
Confidence 99999999999999999999999999999999999999999988777777778899999999999999999999999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
|+...+.+.+.||++++|+|++||++++|||.|++|+.+++++++||++++++++|+++|++||++.++|||+
T Consensus 324 f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 324 FAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp BHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999984
No 2
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=3.6e-66 Score=517.94 Aligned_cols=390 Identities=41% Similarity=0.623 Sum_probs=359.4
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
||++|+|||+++|||+++.+.+++.+..+|+.+|+++||+|+|+++++||.+++|+..++..+++++..++..+|+++++
T Consensus 3 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~ 82 (394)
T 3ss6_A 3 AMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTV 82 (394)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTC
T ss_pred CCceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCc
Confidence 56899999999999999988888999999999999999999999999999999999988777888999999999997679
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++++.+|+|++.+|..|+.+|++|.+|+|||+|+|.++..|+.....+.+..++.....+++. +++++||....|+.
T Consensus 83 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 161 (394)
T 3ss6_A 83 TGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGE 161 (394)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHH-HHTBCTTTCCBHHH
T ss_pred eEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccc-cccccccccchHHH
Confidence 99999999999999999999999999999999999999999776544333333334333334433 67788888899999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
.|++|+++||+|+|++++|++++|++|..|+.++.|++||+|++++.+.+. ..+++|+.+|+ +|.|++++++|+|++
T Consensus 162 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~--~~~~~d~~~R~~~t~e~~~~~~pvf~~ 239 (394)
T 3ss6_A 162 TAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHPRADITAEKLAGLKPAFRK 239 (394)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE--EEECSCCCCCTTCCHHHHHTCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc--eeecccccccCCCCHHHHhhCCCccCC
Confidence 999999999999999999999999999999999999999999998877654 35899999998 999999999999998
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++||++++||++.+.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||++++||
T Consensus 240 ~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d 319 (394)
T 3ss6_A 240 DGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLEINE 319 (394)
T ss_dssp TCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEEeCC
Confidence 89999999999999999999999999999999999999999998777777777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+.+.|.||++++|+|++||++++|||.|++|+..++++++||++++++++|+++|+|||++.++|||+
T Consensus 320 ~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 320 AFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTTEEEEEEEEE
T ss_pred chHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccCcCceeEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996
No 3
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=4.4e-66 Score=517.60 Aligned_cols=392 Identities=46% Similarity=0.688 Sum_probs=359.0
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
+|++|+|||+++|||+++.+.+++.+..+|+.+|+++||+|+|+++++||.+++|+..++..+++++..++..+|+++++
T Consensus 3 ~m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~ 82 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV 82 (395)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS
T ss_pred CCCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc
Confidence 36899999999999999988888999999999999999999999999999999999988777889999999999997679
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++++.+|+|++.+|..|+.+|++|.+|+|||+|+|+++..|+.....+.+..++.....+++..+++++|+....|+.
T Consensus 83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (395)
T 4e1l_A 83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGI 162 (395)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHH
T ss_pred eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHH
Confidence 99999999999999999999999999999999999999998776543333333344444455556678888888889999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
.|++|+++||+|+|+++++++++|+++..|++++.|++||+|++++.+.++| .++++|+.+|+ +|.|++++++|+|++
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~-~~~~~d~~~r~~~t~e~l~~~~~v~~~ 241 (395)
T 4e1l_A 163 TAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSKLKPAFKK 241 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEE-EEECSCSCCCTTCCHHHHHHCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcc-eEECCccccCCCCCHHHHhhCCCccCC
Confidence 9999999999999999999999999999999999999999999987776665 45789999998 999999999999999
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++||++++||++.+.+++++.+++++|.|++...+.|..+..++..+++++|+++|++++|||++++||
T Consensus 242 ~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~~d 321 (395)
T 4e1l_A 242 DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANE 321 (395)
T ss_dssp TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence 99999999999999999999999999999999999999999998877777777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+.+.+.||++++|+|++||+.++|||.|++|+..++++++||++++++++++++|+|||++.++|||+
T Consensus 322 ~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 322 AFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCSEEEEEEESSTTEEEEEEEEC
T ss_pred hhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999984
No 4
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=4.5e-65 Score=511.10 Aligned_cols=390 Identities=38% Similarity=0.562 Sum_probs=342.6
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~~ 91 (414)
++|+|||+++|||+++++.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+++. .++.+..++..+|+++++|
T Consensus 2 ~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p 81 (401)
T 1ulq_A 2 PEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA 81 (401)
T ss_dssp -CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE
T ss_pred CceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCcc
Confidence 689999999999999988888899999999999999999999999999999999887765 6889999999999975689
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccc----cccccc-ccccCC
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM----LKDGLW-DVYNDF 166 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~ 166 (414)
+++++++|+|++.+|..|+++|++|++|+|||+|+|.++..|+.....+.+..++.....+.+ ...++. ++|...
T Consensus 82 ~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 161 (401)
T 1ulq_A 82 GCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTE 161 (401)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCC
T ss_pred EeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccc
Confidence 999999999999999999999999999999999999998866533211111111110000110 112333 223345
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRP 245 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~ 245 (414)
.|+..|++|+++||+|+|+++++++++|+++..||.++.|+++|+|++++++.++ ..+++|+.+|+ +|.|+++++||
T Consensus 162 ~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rp 239 (401)
T 1ulq_A 162 SMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALRP 239 (401)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSCB
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCc--eeeccccccCCCCCHHHHhhCCC
Confidence 6899999999999999999999999999999999999999999999877655432 45889999998 99999999999
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCcee
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+|+++|++|++|||+++|||+++||++++++++++.+++++|.|++...+.+..+..++..+++++|+++|++++|||++
T Consensus 240 if~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~i 319 (401)
T 1ulq_A 240 VFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLI 319 (401)
T ss_dssp SSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEE
T ss_pred ccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99888999999999999999999999999999999999999999999988777777788999999999999999999999
Q ss_pred eccccchhHHHHHHHHcCC--CCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 326 EINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl--~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
|+||+|+.+.+..+|.||+ +.+|+|++||++++|||.|++|+++++++++||++++.+++|.++|++||++.++|||+
T Consensus 320 e~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 320 ELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVEG 399 (401)
T ss_dssp EECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred EEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCCCEEEEEeecCCcccEEEEEEe
Confidence 9999999999999999999 45689999999999999999999999999999999999999999999999999999997
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
.
T Consensus 400 ~ 400 (401)
T 1ulq_A 400 M 400 (401)
T ss_dssp C
T ss_pred C
Confidence 3
No 5
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=4.4e-65 Score=509.88 Aligned_cols=388 Identities=41% Similarity=0.633 Sum_probs=348.2
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
|++|+|||+++|||+++.+++.+.++.+|+.+|+++||+|+|+++++||.+++|+..++..+++.+.+++..+|+++.+|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 47899999999999999888888999999999999999999999999999999998887777889999999999975589
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (414)
+++++++|+|++.+|..|+++|++|++|+|||+|+|.++..|+. ...+.+..++.....+.+..+++++||....|+.+
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHC-AHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTT 160 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEE-ECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHH
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccc-cccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999876652 11011111111111222333456667666789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCC-CCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG-RGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~-~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
|++|+++||+|+|++++|++++|++|..|++++.|++||+|++.+.+ .++| |++|+.+|+ +|.|+++++||++++
T Consensus 161 a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~---f~~d~~~r~~~t~e~~~~~~~v~~~ 237 (392)
T 2vu1_A 161 AENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDIT---VDADEYIRHGATLDSMAKLRPAFDK 237 (392)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEE---ECSCSSCCTTCCHHHHHTCCCSSCT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCcee---eccccccCCCCCHHHHhcCCCccCC
Confidence 99999999999999999999999999999999999999999987543 2456 999999999 999999999999988
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++|||+++||++.+.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||+||+||
T Consensus 238 ~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie~~d 317 (392)
T 2vu1_A 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANE 317 (392)
T ss_dssp TCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEEecc
Confidence 89999999999999999999999999999999999999999998877766777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+.+.+.||++++|+|++||++++|||.|++|+++++++++||++++++++|++.|+|||++.++|||+
T Consensus 318 ~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 318 AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEEC
T ss_pred ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCCCEEEEEEecccchheEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986
No 6
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=4.3e-64 Score=503.37 Aligned_cols=388 Identities=45% Similarity=0.658 Sum_probs=347.0
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+.+.++..+.+++..+|++..+|+
T Consensus 6 ~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~ 85 (397)
T 1wl4_A 6 DPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPA 85 (397)
T ss_dssp SCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCE
T ss_pred CcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccE
Confidence 57999999999999998888889999999999999999999999999999999988877678899999999999656999
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
++++++|+|++.||..|+++|++|++|+|||+|+|.++..|+... .+.+..++....++.+...++++||....|+.++
T Consensus 86 ~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a 164 (397)
T 1wl4_A 86 WSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAY-LRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITA 164 (397)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECC-CSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHH
T ss_pred EEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccc-cccccccCcccccchhccccccCccccchHHHHH
Confidence 999999999999999999999999999999999999987665321 1111111111112223334666666667899999
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCC-
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG- 250 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~- 250 (414)
++|+++||+|+|++++|++++|++|..|+..+.|++||+|++++.+.++ ..+++|+.+++ +|.|+++++||+|+++
T Consensus 165 ~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rpvfd~~~ 242 (397)
T 1wl4_A 165 ENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYFLTDG 242 (397)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHTSCCSSCCSS
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCCCC
Confidence 9999999999999999999999999999999999999999987665432 35778888887 9999999999999765
Q ss_pred -CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 251 -GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 251 -g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
|++|++|||+++|||+++||++++.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||+||+||
T Consensus 243 ~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~d 322 (397)
T 1wl4_A 243 TGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINE 322 (397)
T ss_dssp CCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECC
T ss_pred CCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 8999999999999999999999999999999999999999998877766777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+.+.+.+.+.||++++|+|++||++++|||.|++|+++++++++||++++++++|++.|+|||++.++|||+
T Consensus 323 ~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 323 AFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTTEEEEEEEEE
T ss_pred ccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCCCEEEEEEecccchheEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997
No 7
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=6.2e-64 Score=500.32 Aligned_cols=378 Identities=37% Similarity=0.528 Sum_probs=343.5
Q ss_pred CCceEEEeeecCccccCC-CCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCC
Q 015003 12 ARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~AL~dA-gi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~ 88 (414)
|++|+|||+++|||+++. +++++.+..+|+.+|+++||+|+ |+++++||.+++|+..++.. +++.+.+++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 478999999999999997 88888999999999999999999 99999999999999988775 7889999999999976
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
.+|+++++++|+|++.+|.+|+++|++|++|++||+|+|+++..|+... ++ ..+ ..+.+++++ ...|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~-------~~----~~~-~~~~~~~~~-~~~~ 147 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHG-------VD----FHP-GLSRNVAKA-AGMM 147 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTT-------BC----CCT-TCC--------CCC
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccc-------cC----cCc-ccccccccc-cccH
Confidence 7999999999999999999999999999999999999999998765411 11 111 234455666 6789
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (414)
++.|++|+++||+|+|++++|++++|+++..|++++.|+++|+|++++.+.+++ ..+++|+.+|+ +|.|+++++||+|
T Consensus 148 g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~-~~~~~d~~~r~~~t~e~l~~~~p~f 226 (387)
T 3goa_A 148 GLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVIRPETTVEALSTLRPAF 226 (387)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCE-EEECSCTTCCTTCCHHHHTTSCCSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcc-cccccccccCCCCCHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999999999988776653 35899999998 9999999999999
Q ss_pred cC-CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceee
Q 015003 248 KE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (414)
Q Consensus 248 ~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~ 326 (414)
++ +|++|++|||+++||++++||++.+.+++++.+++++|.|++...+.+..+..++..+++++|+++|++++|||++|
T Consensus 227 ~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve 306 (387)
T 3goa_A 227 DPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFE 306 (387)
T ss_dssp CTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred cCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 98 89999999999999999999999999999999999999999999988887778889999999999999999999999
Q ss_pred ccccchhHHHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 327 INEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 327 ~hd~~~~~~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+||+|+.+.+...+.||++ ..|+|++||++++|||.|++|+.+++++++||+.+++++++++.|+|||++.++|||+
T Consensus 307 ~h~~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 307 MNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp ECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEC
T ss_pred EeCcchHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCCCEEEEEeccCcCceEEEEEEe
Confidence 9999999999999999994 4589999999999999999999999999999999999999999999999999999986
No 8
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=5.1e-64 Score=507.33 Aligned_cols=385 Identities=36% Similarity=0.571 Sum_probs=340.7
Q ss_pred CCCceEEEeeecCccccCC-CCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCC
Q 015003 11 KARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPN 88 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~ 88 (414)
+|++|+|||+++|||+++. +++++.++.+|+.+|+++||+|+|+++++||.+++|+..++. .+++++..++..+|++.
T Consensus 28 ~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 107 (442)
T 2wu9_A 28 YGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 107 (442)
T ss_dssp GGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCT
T ss_pred cCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCC
Confidence 3578999999999999986 788889999999999999999999999999999999887644 24567889999999965
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
.+|+++++++|+|++.+|..|+++|++|++|+|||+|+|.++..|+.... ...+++..+++ +|+....|
T Consensus 108 ~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~----------~~~~~~~~~~~-~~~~~~~m 176 (442)
T 2wu9_A 108 TVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEG----------SVNPAVKKFAQ-AQNCLLPM 176 (442)
T ss_dssp TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCS----------CCCGGGGGCHH-HHHTTSCH
T ss_pred CceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccc----------ccchhhhhccc-cccchhHH
Confidence 68999999999999999999999999999999999999999875542100 00011111232 44555689
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeec--CCC---CCCceeeecCCCccc-cCHHHHhc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMS--SGR---GKPFIIVDKDEGLEK-FDAAKLMK 242 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~--~~~---~~p~~~~~~~~~~~~-~~~~~~~~ 242 (414)
+..|++|+++||+|+|++++|++++|++|..||.++.|+++|+|++++ ++. +.. .++++||.+|+ +|.|+|++
T Consensus 177 g~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~-~~~~~De~~r~~~t~e~~~~ 255 (442)
T 2wu9_A 177 GVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKP-ITVSVDDGIRPTTTLASLGK 255 (442)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEE-EEECSCTTCCTTCCHHHHHT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCc-eeeecccCcCCCCCHHHHhc
Confidence 999999999999999999999999999999999999999999998764 110 011 35899999998 99999999
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCC
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
+||+|+++|++|++|||+++|||+++||++++.+++++.+|+++|.|++...+.|..+..++..+++++|+++|++++||
T Consensus 256 ~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DI 335 (442)
T 2wu9_A 256 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDI 335 (442)
T ss_dssp SCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGC
T ss_pred CCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHC
Confidence 99999889999999999999999999999999999999999999999999988777677788899999999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--CCeeEEeecccccceeeEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--GKYGVGGICNGGGGASALV 400 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--~~~~l~~~~~~gg~~~a~v 400 (414)
|+||+|++|+.+++..++.||++++|+|++||++++|||.|++|+++++++++||+++. .+++|++.|.|||++.++|
T Consensus 336 d~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~~~glas~~~GGG~~~a~v 415 (442)
T 2wu9_A 336 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAV 415 (442)
T ss_dssp CEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEETTTEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCCCEEEEEeecccchheEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 8899988899999999999
Q ss_pred EEEecce
Q 015003 401 LELMQAV 407 (414)
Q Consensus 401 l~~~~~~ 407 (414)
|++.+.+
T Consensus 416 ~~~~~~~ 422 (442)
T 2wu9_A 416 FERGDGV 422 (442)
T ss_dssp EEECSHH
T ss_pred EEecccc
Confidence 9987653
No 9
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=1.9e-63 Score=497.49 Aligned_cols=383 Identities=35% Similarity=0.524 Sum_probs=338.4
Q ss_pred CccccCCCceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcC----CCccccCeEEEEeecCCCCCCcHHHHH
Q 015003 6 PSESIKARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRAN----VKPLLVQEVFFGNVLSANLGQAPARQA 80 (414)
Q Consensus 6 ~~~~~~~~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAg----i~~~~Id~vi~g~~~~~~~~~~~a~~v 80 (414)
|--..||++|+|||+++|||+++ .+.+++.++.+|+.+|+++||+|+| +++++||.+++|+..+++.+++++.++
T Consensus 3 ~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~v 82 (393)
T 1afw_A 3 SLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAA 82 (393)
T ss_dssp TTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHH
T ss_pred chhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHH
Confidence 33345678999999999999998 4888889999999999999999999 999999999999988776677889999
Q ss_pred HHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccc
Q 015003 81 ALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW 160 (414)
Q Consensus 81 a~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (414)
+..+|+++.+|+++++++|+|++++|..|+++|++|++|++||+|+|.++..|+...+ .+ ....+.+...++
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~-----~~--~~~~~~~~~~g~- 154 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNP-----LG--MISSEELQKNRE- 154 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCT-----TC--SCCCHHHHHCTT-
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccc-----cc--cccchhhhhccc-
Confidence 9999996568999999999999999999999999999999999999998764432110 00 000001111344
Q ss_pred ccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHH
Q 015003 161 DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAK 239 (414)
Q Consensus 161 ~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~ 239 (414)
.|..+..|+..|++|+++||+|+|+++++++++|++|..|++++.|.+||+|++++. ++ .+++|+.+|+ +|.|+
T Consensus 155 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~---~~~~d~~~r~~~t~e~ 229 (393)
T 1afw_A 155 AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS---ICQSDEGPRPNVTAES 229 (393)
T ss_dssp GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC---EECSCSSCCSCCCHHH
T ss_pred ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc---eeccccccCCCCCHHH
Confidence 444446799999999999999999999999999999999999999999999987765 22 4889999998 99999
Q ss_pred HhcCCCCccCC-CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCC
Q 015003 240 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE 318 (414)
Q Consensus 240 ~~~~~~~~~~~-g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~ 318 (414)
++++||+|+++ |++|++|||+++|||+++||++++.+++++.+++++|.|++...+.|..+..++..+++++|+++|++
T Consensus 230 ~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~ 309 (393)
T 1afw_A 230 LSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQ 309 (393)
T ss_dssp HHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCC
T ss_pred HhcCCCcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCC
Confidence 99999999767 89999999999999999999999999999999999999999998877767778899999999999999
Q ss_pred CCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceee
Q 015003 319 ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASA 398 (414)
Q Consensus 319 ~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a 398 (414)
++|||++|+|++|+.+++..+|.||++++|+|++||++++|||.|++|+++++++++||+++++ +++++|+|||++.+
T Consensus 310 ~~dId~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--gl~~~c~ggg~g~a 387 (393)
T 1afw_A 310 VQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI--GVVSMCIGTGMGAA 387 (393)
T ss_dssp GGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE--EEEEEEETTTEEEE
T ss_pred HHHCCEEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC--cEEEEeecccceEE
Confidence 9999999999999999999999999999999999999999999999999999999999998866 99999999999999
Q ss_pred EEEEE
Q 015003 399 LVLEL 403 (414)
Q Consensus 399 ~vl~~ 403 (414)
++||+
T Consensus 388 ~~~~~ 392 (393)
T 1afw_A 388 AIFIK 392 (393)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99997
No 10
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=1.9e-62 Score=490.31 Aligned_cols=377 Identities=37% Similarity=0.544 Sum_probs=337.8
Q ss_pred CCCceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCC
Q 015003 11 KARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP 87 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dA-gi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~ 87 (414)
+|++|+|||+++|||+++ .+.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..+++. +++.+.+++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 357899999999999998 588888999999999999999999 99999999999998887654 578899999999997
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+++|+++++++|+|++.+|.+|+++|++|++|+|||+|+|.++..|+.... +... .+..++ |.....
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~------~~~~----~~~~~~---~~~~~~ 149 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV------DPNP----HMSLYA---AKASGM 149 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB------CCCG----GGGGTS---CGGGGS
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc------ccCc----cccccC---CcchhH
Confidence 679999999999999999999999999999999999999999875643210 1000 010111 112245
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCC--CCceeeecCCCccc-cCHHHHhcCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRG--KPFIIVDKDEGLEK-FDAAKLMKLR 244 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~--~p~~~~~~~~~~~~-~~~~~~~~~~ 244 (414)
++..|++|+++||+|++++++|++++|+++..|++++.|.++|+|++.+.+.+ +| |++|+++|+ +|.|+++++|
T Consensus 150 ~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~---fd~d~~~r~~~t~e~~~~~~ 226 (390)
T 1wdk_C 150 MGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKI---FDYDETIRPDTTLESLAALK 226 (390)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEE---ECSCTTCCTTCCHHHHHTSC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCccee---eccccccCCCCCHHHHhcCC
Confidence 89999999999999999999999999999999999999999999987654432 46 999999998 9999999999
Q ss_pred CCccC-CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCc
Q 015003 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 245 ~~~~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
|++++ +|++|++|||+++|||+++||++++.+++++.+++++|.|++...+.|..+..++..+++++|+++|++++|||
T Consensus 227 ~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 306 (390)
T 1wdk_C 227 PAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADID 306 (390)
T ss_dssp CSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred CcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCc
Confidence 99997 89999999999999999999999999999999999999999998877766677889999999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~v 400 (414)
++|+||+|+...+.+.|.||++ .+|+|++||++++|||.|++|+++++++++||+++++++++++.|++||++.++|
T Consensus 307 ~ve~~d~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~ 386 (390)
T 1wdk_C 307 FIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATV 386 (390)
T ss_dssp EEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEE
T ss_pred EEEeccCCHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCCCEEEEEecccchheEEEE
Confidence 9999999999999999999999 6789999999999999999999999999999999999999999999999999999
Q ss_pred EEE
Q 015003 401 LEL 403 (414)
Q Consensus 401 l~~ 403 (414)
||+
T Consensus 387 ~~~ 389 (390)
T 1wdk_C 387 FER 389 (390)
T ss_dssp EEC
T ss_pred EEe
Confidence 986
No 11
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=3.3e-62 Score=490.31 Aligned_cols=377 Identities=33% Similarity=0.479 Sum_probs=319.0
Q ss_pred CCCceEEEeeecCcccc-CCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCC
Q 015003 11 KARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP 87 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~AL~d-Agi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~ 87 (414)
|+++|+|||+++|||+| +.+++++.+..+|+.+|+++||+| +|+++++||.+++|+..++.. +++++.+++..+|++
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 77899999999999995 677888999999999999999999 999999999999999887653 688999999999996
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
..+|+++++.+|+|++.+|..|+++|++|++|+|||+|+|+++..|+..... . +..++ .+..++....
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~----~----~~~~~----~~~~~~~~~~ 152 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGG----A----WATDP----ETNYRIGFVP 152 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-------------------CCCCT----TTCCCCCCHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCccccccc----c----cccCc----hhhccccccC
Confidence 6799999999999999999999999999999999999999999876543211 0 01111 1223344467
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (414)
++..|+.++++|+++++++++|++.+|++|..+..++.|.++|+|++.++.. ..+++|+++|+ +|.|+++++||+
T Consensus 153 ~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~----~~~~pd~~~r~~~t~e~l~~~~~v 228 (407)
T 3svk_A 153 QGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGL----VILDHDEHMRPDTTMEGLAKLKTA 228 (407)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSC----EEECSCTTCCTTCCHHHHHTSCBS
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCc----eeeCCccccCCCCCHHHHhhCCCe
Confidence 8999999999999999999999999999999999999999999998754431 24789999997 999999999999
Q ss_pred ccCCCc---------------------cccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchH
Q 015003 247 FKEGGS---------------------VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305 (414)
Q Consensus 247 ~~~~g~---------------------~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 305 (414)
|++.|. +|++|||+++|||+++||++++.+++++.+++++|.+++...+++..+..++.
T Consensus 229 f~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~ 308 (407)
T 3svk_A 229 FDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPT 308 (407)
T ss_dssp CC-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHH
T ss_pred ecCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHH
Confidence 986654 39999999999999999999999999999999999999998888777778889
Q ss_pred HHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCee
Q 015003 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (414)
Q Consensus 306 ~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~ 385 (414)
.+++++|+++|++++|||++++||+|+.+.+.+.|.||++++|+|++||++++|||+|++|+++++++++||++++++++
T Consensus 309 ~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~g 388 (407)
T 3svk_A 309 PATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNARRA 388 (407)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecccccceeeEEEEE
Q 015003 386 VGGICNGGGGASALVLEL 403 (414)
Q Consensus 386 l~~~~~~gg~~~a~vl~~ 403 (414)
|++.|+|||++.++|||+
T Consensus 389 l~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 389 LITLCIGGGMGVATIIER 406 (407)
T ss_dssp EEEEECSSSCEEEEEEEE
T ss_pred EEEeeccCcceEEEEEEc
Confidence 999999999999999997
No 12
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=6.1e-62 Score=487.67 Aligned_cols=388 Identities=50% Similarity=0.791 Sum_probs=345.0
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
++++|+|||+++|||+++.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..++..+++.+..++..+|++.++
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 34789999999999999988888899999999999999999999999999999999888777889999999999996568
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++++++|+|++.||..|+++|++|++|+|||+|+|.++..|....+ .+..++.....+.+..+++++++....|++
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNR--GSTPYGGVKLEDLIVKDGLTDVYNKIHMGS 163 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECS--SBCCTTCEEEEEHHHHHTTEETTTTEEHHH
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccc--cccccccccccccccccccccccccchHHH
Confidence 999999999999999999999999999999999999998875542111 000011101112222345666776778999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCcc-C
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK-E 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 249 (414)
.|++|+.+||+|+++++++++++|+++..|+..+.|+++|+|+++++. ++|...+++|+.+++++.|.+.+.||+|. +
T Consensus 164 ~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~ 242 (395)
T 2ib8_A 164 CAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-GQPDVVVKEDEEYKRVDFSKVPKLKTVFQKE 242 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-TSCCEEECSCSGGGSCCTTTGGGSCCTTCSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-CCcceeeccccccccCCHHHHhcCCccccCC
Confidence 999999999999999999999999999999999999999999998876 77655689999999889999999999994 4
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++|||+++||++++.+++++.+++++|.|++....+|..+..++..+++++|+++|++++|||++|+||
T Consensus 243 ~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~D 322 (395)
T 2ib8_A 243 NGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNE 322 (395)
T ss_dssp SCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECC
T ss_pred CCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEEEEcc
Confidence 79999999999999999999999999999999999999999987656655666788999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+..+|.||++++|+|++||++++|||.|++|+++++++++||+. +++++++.|++||++.+++||+
T Consensus 323 ~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~--~~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 323 AFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--GEYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT--TCEEEEEEEETTTEEEEEEEEE
T ss_pred ccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh--CCceEEEEecccCHhheEEEEc
Confidence 99999999999999999999999999999999999999999999999996 6789999999999999999997
No 13
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=9.5e-61 Score=481.51 Aligned_cols=381 Identities=39% Similarity=0.587 Sum_probs=332.4
Q ss_pred CCceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 12 ARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
+++|+|+|+++|||+++ .+..++.++.+|+.+|+++||+|+|+++++||.+++|+..+++.+++.+..++..+|++.++
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~ 108 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV 108 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc
Confidence 36799999999999986 35677899999999999999999999999999999999887665677888899999996568
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccc-cccccccccCCchH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML-KDGLWDVYNDFGMG 169 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 169 (414)
|+++++++|+|++.||..|+++|++|++|+|||+|+|.++..|+.... .. .+.+. .+..++++ ..++
T Consensus 109 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~-----~~-----~~~~~~~~~~~~~~--~~~g 176 (418)
T 2iik_A 109 PLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG-----NI-----TSRLMEKEKARDCL--IPMG 176 (418)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC----------CC-----CTTGGGCHHHHGGG--SCHH
T ss_pred eEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc-----cc-----chhhhccccccccc--ccHH
Confidence 999999999999999999999999999999999999999886542210 00 00000 11122222 4588
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCC---ceeeecCCCccc-cCHHHHhcCCC
Q 015003 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKP---FIIVDKDEGLEK-FDAAKLMKLRP 245 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p---~~~~~~~~~~~~-~~~~~~~~~~~ 245 (414)
..+++++++||+|+|++++|++++|++|..|+..+.|+++|+|++++....+| -..+++|+.+|+ +|.|+++++||
T Consensus 177 ~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~ 256 (418)
T 2iik_A 177 ITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKP 256 (418)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCC
Confidence 99999999999999999999999999999999888999999988653111111 134788999998 99999999999
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCcee
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+|+++|++|++||+.++|||+|+||++++.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||++
T Consensus 257 vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~v 336 (418)
T 2iik_A 257 AFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIF 336 (418)
T ss_dssp SSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccCCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCee
Confidence 99988999999999999999999999999999999999999999998876666666778899999999999999999999
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCC-eeEEeecccccceeeEEEEEe
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK-YGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~-~~l~~~~~~gg~~~a~vl~~~ 404 (414)
|+|++|+...+..++.||++++|+|++||.+++|||.|++|+++++++++||++++++ ++++++|++||++.++|||+.
T Consensus 337 E~h~af~~~~~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 337 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp EECCSBHHHHHHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred eeeccchHHHHHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcCCCeeeEEEEeeccchhheEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999887 899999999999999999975
No 14
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.8e-48 Score=400.86 Aligned_cols=366 Identities=16% Similarity=0.084 Sum_probs=268.9
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCC------------CCCCcHHHH
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA------------NLGQAPARQ 79 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~------------~~~~~~a~~ 79 (414)
+|+++|||+++||+.+..+.+++.++.||+.+|++.||+|+|+++++||.+|.|+.... ....+.+..
T Consensus 17 PRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 96 (520)
T 4egv_A 17 PRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRS 96 (520)
T ss_dssp TTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHH
T ss_pred CCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHH
Confidence 46788999999999887777888999999999999999999999999988776654321 124567888
Q ss_pred HHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhc-c--CCCCCCcccccccc
Q 015003 80 AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARK-G--SRLGHDTIVDGMLK 156 (414)
Q Consensus 80 va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~-~--~~~~~~~~~~~~~~ 156 (414)
++..+|+++ .+.++++.+|+|+++++..|+++|++|++|+||++|+|+|++.|+....... . ...........+..
T Consensus 97 va~~lGl~~-~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (520)
T 4egv_A 97 VARNIGADP-AHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGY 175 (520)
T ss_dssp HHHHHTCCC-SEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-----------------------------
T ss_pred HHHHcCCCC-ceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCcccccccccccccccc
Confidence 999999984 7888999999999999999999999999999999999999997764332110 0 00000000000001
Q ss_pred c----ccccccc----CCchHHHHHHHHHHcCCCHH----HHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCce
Q 015003 157 D----GLWDVYN----DFGMGVCAEICANKHTITRD----EQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224 (414)
Q Consensus 157 ~----~~~~~~~----~~~~~~~a~~~~~~~g~t~~----~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~ 224 (414)
. .+..+|. ...+.+.+++++.+|+++++ ++..++++.++++..|+.
T Consensus 176 ~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~---------------------- 233 (520)
T 4egv_A 176 DGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPY---------------------- 233 (520)
T ss_dssp -----CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTT----------------------
T ss_pred chhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCcc----------------------
Confidence 1 1112222 13467778888899998865 456677788887776654
Q ss_pred eeecCCCccc-cCHHHHhcCCCCccC--CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc-
Q 015003 225 IVDKDEGLEK-FDAAKLMKLRPSFKE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF- 300 (414)
Q Consensus 225 ~~~~~~~~~~-~~~~~~~~~~~~~~~--~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~- 300 (414)
+.+++ +|.|++...+|.+.. ++..|+.|||.++|||+|+||+|+++++++|.+++++|.+++.....+..+
T Consensus 234 -----a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~ 308 (520)
T 4egv_A 234 -----SSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLL 308 (520)
T ss_dssp -----SSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGG
T ss_pred -----ccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccc
Confidence 33344 899999976665421 346688999999999999999999999999999988888887776544433
Q ss_pred -------ccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHH
Q 015003 301 -------TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARIL 370 (414)
Q Consensus 301 -------~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l 370 (414)
..++..+++++|+++|++++|||++|+||+|++..+.++|.||+++ .++|++||++++|||.+++|+..+
T Consensus 309 ~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~ 388 (520)
T 4egv_A 309 ERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGI 388 (520)
T ss_dssp GCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHH
T ss_pred cccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHH
Confidence 2355789999999999999999999999999999999999999964 489999999999999999999999
Q ss_pred HHHHHHHHhcCCCeeEEeecccccc-eeeEEEEEec
Q 015003 371 VTLLGVLRHKKGKYGVGGICNGGGG-ASALVLELMQ 405 (414)
Q Consensus 371 ~~~~~ql~~~~~~~~l~~~~~~gg~-~~a~vl~~~~ 405 (414)
+++++|||++.++++|.+..++-.. .++++|.+..
T Consensus 389 ~~~v~~lr~~~~~~~L~~~~gg~~~~~~~~~l~~~~ 424 (520)
T 4egv_A 389 AEAVNEMRDKPGQFALVGANGGIASKYSVGIYSTEP 424 (520)
T ss_dssp HHHHHHHHHSTTCEEEEEEEETTTTEEEEEEEESSC
T ss_pred HHHHHHHhcCCCCceEEeCCCCeeeeeeEEEEcCCC
Confidence 9999999999999999864333332 3455555543
No 15
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.4e-33 Score=283.98 Aligned_cols=270 Identities=20% Similarity=0.246 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------C---------CCcHHHHHHHHCCCCC
Q 015003 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGAGIPN 88 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~-----------------~---------~~~~a~~va~~lgl~~ 88 (414)
+|+.+|+++||+|||+++++|| .|++|+..+.. . ....+.+++..+|++
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK- 157 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC-
Confidence 8999999999999999999999 79999876531 0 124688999999995
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
+|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |..+.. |
T Consensus 158 -gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~~-----------------------------~ 206 (416)
T 1e5m_A 158 -GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT-PLSYAG-----------------------------F 206 (416)
T ss_dssp -SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH-----------------------------H
T ss_pred -CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH-----------------------------H
Confidence 699999999999999999999999999999999999998543 321110 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCcc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (414)
.+. +.+..+ ...++..|+| |+++
T Consensus 207 --------~~~------------------------~~ls~~---~~~p~~~~rp---fd~~------------------- 229 (416)
T 1e5m_A 207 --------ASA------------------------RALSFR---NDDPLHASRP---FDKD------------------- 229 (416)
T ss_dssp --------HHT------------------------TCBCCC---TTCGGGTCCT---TBTT-------------------
T ss_pred --------HHc------------------------CCccCC---CCCCcccccc---CccC-------------------
Confidence 000 011100 0012345666 5554
Q ss_pred CCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCCCc
Q 015003 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. ........++++++|+++|++++|||
T Consensus 230 ~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 302 (416)
T 1e5m_A 230 RDGFV-------MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302 (416)
T ss_dssp CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred CCCce-------eeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCC
Confidence 45555 8999999999999999999999999999999988752 22334568899999999999999999
Q ss_pred eeeccccchhH----H-HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----------------
Q 015003 324 YYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (414)
Q Consensus 324 ~~~~hd~~~~~----~-~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----------------- 381 (414)
++++|++++.. + ..+.+.+|....++++++.|..+||+.||+|+..+++++++|+++.
T Consensus 303 ~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~ 382 (416)
T 1e5m_A 303 YINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLD 382 (416)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSC
T ss_pred EEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 99999999863 2 2234556665557888888999999999999999999999999752
Q ss_pred ----------CCeeEEeecccccceeeEEEEEe
Q 015003 382 ----------GKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 382 ----------~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
.++.+.++++.||+++++||+..
T Consensus 383 ~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 383 YVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp CCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred ccCCccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 24677888999999999999863
No 16
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=100.00 E-value=2.8e-33 Score=282.55 Aligned_cols=271 Identities=24% Similarity=0.298 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCC--------------------------CCCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~va~~lgl 86 (414)
...|+.+|+++||+|||+++++|| .+++|+..+. ......+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 356899999999999999999999 4888766421 1123467889999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++. |.....-.
T Consensus 168 ~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~~~-------------------------- 218 (427)
T 3ho9_A 168 R--GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PLGVGGFG-------------------------- 218 (427)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHHHH--------------------------
T ss_pred C--CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHHHH--------------------------
Confidence 5 799999999999999999999999999999999999999986 43321100
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
..+.+..+ ...++..++| |+.+
T Consensus 219 -----------------------------------~~~~ls~~---~~~~~~~~~p---fd~~----------------- 240 (427)
T 3ho9_A 219 -----------------------------------AARALSTR---NDNPQAASRP---WDKE----------------- 240 (427)
T ss_dssp -----------------------------------HTTCBCCC---TTCHHHHCCT---TBTT-----------------
T ss_pred -----------------------------------hccCcccC---CCCCCcccCC---ccCC-----------------
Confidence 00000000 0001223455 4444
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. .....+..++++++|+++|++++|
T Consensus 241 --~~G~v-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 311 (427)
T 3ho9_A 241 --RDGFV-------LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 311 (427)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------eeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 45666 8999999999999999999999999999999887632 223445689999999999999999
Q ss_pred Cceeeccccch-----hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFS-----VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~-----~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||++++|.+++ .....+.+.||...++++++++|..+||+.||+|+.++++++++|+.+
T Consensus 312 Id~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~ 391 (427)
T 3ho9_A 312 IGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCD 391 (427)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCC
T ss_pred ccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 99999995544 456667788888878999999999999999999999999999999876
Q ss_pred ------------CCCeeEEeecccccceeeEEEEE
Q 015003 381 ------------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 ------------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+.++++.||+++++||++
T Consensus 392 ~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 392 LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp CBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 34567888999999999999985
No 17
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=100.00 E-value=1e-32 Score=278.40 Aligned_cols=275 Identities=24% Similarity=0.312 Sum_probs=213.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cC----eEEEEeecC--------------------------CCCCCcHHHHHHHHC
Q 015003 36 SATKLGSIAIECALKRANVKPLL-VQ----EVFFGNVLS--------------------------ANLGQAPARQAALGA 84 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~-Id----~vi~g~~~~--------------------------~~~~~~~a~~va~~l 84 (414)
...+|+.+|+++||+|||+++++ || .+++|+..+ ....+..+..|+..|
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 35689999999999999999998 88 577776532 122344678899999
Q ss_pred CCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc
Q 015003 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (414)
Q Consensus 85 gl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (414)
|++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 166 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~-------------------------- 216 (428)
T 3kzu_A 166 KLR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVS-RISLAG-------------------------- 216 (428)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH--------------------------
T ss_pred CCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCC-HHHHHH--------------------------
Confidence 995 699999999999999999999999999999999999998654 322211
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
+. . ...++.+ -...+...++| |+.+
T Consensus 217 ------------------------~~---------~--~~~ls~~--~~~~~~~~~~p---fd~~--------------- 241 (428)
T 3kzu_A 217 ------------------------FA---------A--CKALSTE--RNDDPTAASRP---YDED--------------- 241 (428)
T ss_dssp ------------------------HH---------H--TTCBCCS--CTTSGGGTCCT---TBTT---------------
T ss_pred ------------------------HH---------H--ccccccC--ccCCcccccCC---cccC---------------
Confidence 00 0 0011100 00001234455 4444
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC-----CCccccchHHHHHHHHHHcCCCC
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEA 319 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~~ 319 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+. +.....+..++++++|+++|+++
T Consensus 242 ----~~G~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~ 310 (428)
T 3kzu_A 242 ----RDGFV-------MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVP 310 (428)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred ----CCcee-------ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 44555 899999999999999999999999999999988763 22333466899999999999999
Q ss_pred CCCceeeccccchhHH----HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------
Q 015003 320 SQIDYYEINEAFSVVA----IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (414)
Q Consensus 320 ~DId~~~~hd~~~~~~----~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------- 380 (414)
+|||++++|++++... ..+.+.+|...+++|+++++.++|||.|++|+..++++++||+.+
T Consensus 311 ~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~ 390 (428)
T 3kzu_A 311 DEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQT 390 (428)
T ss_dssp GGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCC
T ss_pred HHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCC
Confidence 9999999997777433 334555677777899999999999999999999999999999975
Q ss_pred ------------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 ------------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 ------------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.+.++++.||+++++||+...
T Consensus 391 ~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 391 RIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp SSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CcccCCCCCcCCCCCEEEEeCcccChhhEEEEEeecC
Confidence 1245678889999999999998753
No 18
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=100.00 E-value=4.1e-32 Score=273.00 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCC-----------------CCC---------CcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA-----------------NLG---------QAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~-----------------~~~---------~~~a~~va~~lgl 86 (414)
..+|+.+|+++||+|||+++++|| .|++|+..+. ... ...+..++..||+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 456999999999999999999999 8999976421 111 2247789999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....-
T Consensus 154 ~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-~~~~~~~--------------------------- 203 (413)
T 3o04_A 154 K--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPIT-KMSLAGF--------------------------- 203 (413)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHHH---------------------------
T ss_pred C--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCC-HHHHHHH---------------------------
Confidence 5 699999999999999999999999999999999999999765 3222110
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
...+.+.. ...++..++| |+.+
T Consensus 204 ----------------------------------~~~~~ls~----~~~p~~~~~p---fd~~----------------- 225 (413)
T 3o04_A 204 ----------------------------------TANKALSL----NPDPETACRP---FDKD----------------- 225 (413)
T ss_dssp ----------------------------------HHTTCBCC----CCCTTTSCCT---TBTT-----------------
T ss_pred ----------------------------------HhcccccC----CCCCCCCcCC---CcCC-----------------
Confidence 00001111 0112345666 5544
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. ........++++++|+++|++++|
T Consensus 226 --~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~d 296 (413)
T 3o04_A 226 --RDGFI-------IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDK 296 (413)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------EeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 45565 8999999999999999999999999999999887632 222334678999999999999999
Q ss_pred CceeeccccchhH----HHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFSVV----AIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||++++|.+++.. +.. +.+.++...++++++++|..+|||.||+|+.++++++++|+.+
T Consensus 297 Id~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 376 (413)
T 3o04_A 297 VDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCD 376 (413)
T ss_dssp CCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCC
T ss_pred cCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC
Confidence 9999999998863 222 2344566666899999999999999999999999999999865
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.+..+++.||+++++||+..+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 377 LDYVPNEAREANVNVVISNSFGFGGHNATLVFKRIE 412 (413)
T ss_dssp SCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cccCCCcccCCCCCEEEEeCccCCceEEEEEEEeCC
Confidence 1245678889999999999999754
No 19
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=100.00 E-value=1.5e-32 Score=278.96 Aligned_cols=274 Identities=23% Similarity=0.271 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcccc-C----eEEEEeecCC--------------------------CCCCcHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLV-Q----EVFFGNVLSA--------------------------NLGQAPARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~I-d----~vi~g~~~~~--------------------------~~~~~~a~~va~~lg 85 (414)
..+|+.+|+++||+|||+++++| | .+++|+..+. ...+..+..++..||
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 46799999999999999999999 7 6888876321 123346788999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++. |..+..-
T Consensus 182 l~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~-~~~~~~~-------------------------- 232 (451)
T 4ddo_A 182 FR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-KVSLGGF-------------------------- 232 (451)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHHH--------------------------
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccC-HHHHHHH--------------------------
Confidence 95 699999999999999999999999999999999999999876 3322110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
. ........ |..+ +...++| |+.+
T Consensus 233 ------------------------~------~~~~ls~~-~~~~------~~~~~~p---fd~~---------------- 256 (451)
T 4ddo_A 233 ------------------------A------AARALSTG-FSEE------PVRASRP---FDRD---------------- 256 (451)
T ss_dssp ------------------------H------HTTCBCCS-CTTS------GGGSCCT---TBTT----------------
T ss_pred ------------------------H------HHhhhccC-CCcC------ccccccc---cccC----------------
Confidence 0 00000000 1111 1234555 4444
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|.+ ++|||+|+||++.+.+++++.+++++|.|++...+.... ......++++++|+++|++++
T Consensus 257 ---~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~ 326 (451)
T 4ddo_A 257 ---RDGFV-------MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPE 326 (451)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCCcE-------EeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 44555 899999999999999999999999999999988753221 112447899999999999999
Q ss_pred CCceeeccccchhH----HHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------
Q 015003 321 QIDYYEINEAFSVV----AIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (414)
Q Consensus 321 DId~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------- 380 (414)
|||+|++|.+++.. +.. +.+.++. ..++++++.|..+|||.||+|+.++++++++|+.+
T Consensus 327 dId~ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~ 405 (451)
T 4ddo_A 327 QVDYVNAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAA 405 (451)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGG
T ss_pred HcCEEEecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccc
Confidence 99999999999863 222 3344565 34678888899999999999999999999999865
Q ss_pred -------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 381 -------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 381 -------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
..++.+..+++.||+++++||+....
T Consensus 406 ~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~~ 444 (451)
T 4ddo_A 406 DGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYPS 444 (451)
T ss_dssp TTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESCC
T ss_pred ccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCCC
Confidence 12456788899999999999998654
No 20
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=100.00 E-value=7.7e-32 Score=272.07 Aligned_cols=270 Identities=20% Similarity=0.247 Sum_probs=211.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC--------------------------CCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~va~~lg 85 (414)
+..+|+.+|+++||+|||+++++|| .+++|+..+++. .+..+.+++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 3567999999999999999999999 688887654321 2347789999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++|+++|+|++.||..|+++|++|++|+|||+|+|.++..+.....
T Consensus 171 l~--gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~--------------------------- 221 (428)
T 3mqd_A 171 IK--GINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFD--------------------------- 221 (428)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHH---------------------------
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHH---------------------------
Confidence 94 7999999999999999999999999999999999999997751110000
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
+. +.+..+ ....++..|+| |+.+
T Consensus 222 ------------~~------------------------~~ls~~--~~~~p~~~~rp---fd~~---------------- 244 (428)
T 3mqd_A 222 ------------AM------------------------GAMSSK--YNDTPSTASRA---YDKN---------------- 244 (428)
T ss_dssp ------------HT------------------------TCBCCT--TTTSGGGSCCT---TBTT----------------
T ss_pred ------------Hh------------------------hhhccc--ccCCcccccCc---ccCC----------------
Confidence 00 000100 00012445666 5555
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc---cccchHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|++ ++|||+++||++.+.+++++.+++++|.|++...+.... ...++.++++++|+ |++ +||
T Consensus 245 ---~~G~v-------~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dI 311 (428)
T 3mqd_A 245 ---RDGFV-------IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKI 311 (428)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCC
T ss_pred ---CCCcc-------cccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-ccc
Confidence 56676 799999999999999999999999999999998875432 34467899999999 999 999
Q ss_pred ceeeccccchhH-----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+|+.|.+++.. ...+.+.|+...+.+++++.|..+||+.||+|++.++.++++|+.+
T Consensus 312 d~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 391 (428)
T 3mqd_A 312 DYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFAD 391 (428)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTT
T ss_pred CEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCccccc
Confidence 999999888852 2334556775455578899999999999999999999999999854
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.+..+++.||+++++||+..
T Consensus 392 ~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 392 MPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp SCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCccCCccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 124567888999999999999874
No 21
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=8.9e-33 Score=277.44 Aligned_cols=272 Identities=24% Similarity=0.355 Sum_probs=213.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
...+|+.+|+++||+|||+++++||. +++|+..+++ .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 45789999999999999999999995 6777654431 01246788999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....-
T Consensus 150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~~-------------------------- 200 (408)
T 1j3n_A 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMAIGAF-------------------------- 200 (408)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHHH--------------------------
T ss_pred CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHHH--------------------------
Confidence 95 699999999999999999999999999999999999998655 3221100
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
.. .+.++.. ...++..|+| |+++
T Consensus 201 -----~~------------------------------~~~ls~~---~~~p~~~~~p---fd~~---------------- 223 (408)
T 1j3n_A 201 -----AV------------------------------MRALSTR---NEEPEKASRP---FTLS---------------- 223 (408)
T ss_dssp -----HH------------------------------TTCBCCC---TTCHHHHCCT---TBTT----------------
T ss_pred -----Hh------------------------------cccccCC---CCCCCcCccc---CcCC----------------
Confidence 00 0000000 0001223445 4443
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. .....+..++++++|+++|++++
T Consensus 224 ---~dg~v-------~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~ 293 (408)
T 1j3n_A 224 ---RDGFV-------MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPE 293 (408)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCceE-------EeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 44555 8999999999999999999999999999999887642 22334567899999999999999
Q ss_pred CCceeeccccchhH-----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------
Q 015003 321 QIDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (414)
Q Consensus 321 DId~~~~hd~~~~~-----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------- 380 (414)
|||++++|++++.. ...+.+.||...++++++++|..+||+.+++|+..+++++++|+++
T Consensus 294 dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~ 373 (408)
T 1j3n_A 294 QVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPEL 373 (408)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTS
T ss_pred HcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Confidence 99999999999975 4556677887777899999999999999999999999999999974
Q ss_pred -----------CCCeeEEeecccccceeeEEEEE
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+..+++.||+++++||+.
T Consensus 374 ~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 374 DLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp CSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 13567888899999999999985
No 22
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=100.00 E-value=1e-31 Score=271.69 Aligned_cols=272 Identities=20% Similarity=0.261 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
..+|+.+|+++||+|||+++++|| .|++|+..+.. .....+.+++..+|+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 457999999999999999999999 99999876531 112467899999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 178 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~---------------------------- 226 (437)
T 2gqd_A 178 K--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMAIAG---------------------------- 226 (437)
T ss_dssp C--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH----------------------------
T ss_pred C--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH----------------------------
Confidence 5 699999999999999999999999999999999999998755 322110
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
+. ..+.+.. ...++..|+| |+++
T Consensus 227 ----------------------~~-----------~~~~ls~----~~~p~~~~~p---fd~~----------------- 249 (437)
T 2gqd_A 227 ----------------------FS-----------ASRALST----NDDIETACRP---FQEG----------------- 249 (437)
T ss_dssp ----------------------HH-----------HTTCBCC----CCCTTTSSCT---TCTT-----------------
T ss_pred ----------------------HH-----------hccCccC----CCCCccccCC---CCCC-----------------
Confidence 00 0001110 0012345566 5544
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++|
T Consensus 250 --~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~d 320 (437)
T 2gqd_A 250 --RDGFV-------MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320 (437)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------eeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhh
Confidence 44555 89999999999999999999999999999999887532 12334578999999999999999
Q ss_pred CceeeccccchhH----H-HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC---------------
Q 015003 322 IDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------- 381 (414)
Q Consensus 322 Id~~~~hd~~~~~----~-~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--------------- 381 (414)
||+|++|++++.. + ..+.+.||....++++++.|..+||+.+|+|+..+++++++|+.+.
T Consensus 321 Id~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (437)
T 2gqd_A 321 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECD 400 (437)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCC
T ss_pred CCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 9999999999974 2 2344556765567888888999999999999999999999999752
Q ss_pred ------------CCeeEEeecccccceeeEEEEEec
Q 015003 382 ------------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 ------------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.+..+++.||+++++||+..+
T Consensus 401 ~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 401 LDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp SBCCBSSCEECCCSEEEEEEECGGGEEEEEEEECCC
T ss_pred cccCCCccccCCCCEEEEccCcCCCeeEEEEEEecc
Confidence 246778889999999999998753
No 23
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=100.00 E-value=1.1e-31 Score=271.55 Aligned_cols=270 Identities=21% Similarity=0.223 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHHcCCCc-cccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANVKP-LLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~-~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
..+|+.+|+++||+|||+++ ++|| .|++|+..+++ .....+.+++..+|
T Consensus 97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 45699999999999999998 8888 58888775532 12347889999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 177 l~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~--------------------------- 226 (438)
T 2iwz_A 177 LK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLSLAG--------------------------- 226 (438)
T ss_dssp CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH---------------------------
T ss_pred CC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHHHHH---------------------------
Confidence 95 699999999999999999999999999999999999998654 422110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
+.+ .+.+.++ ..++..|+| |+++
T Consensus 227 ----------~~~------------------------~~~ls~~----~~p~~~~~p---fd~~---------------- 249 (438)
T 2iwz_A 227 ----------FSR------------------------ARALSTN----SDPKLACRP---FHPK---------------- 249 (438)
T ss_dssp ----------HHH------------------------TTCBCCC----SCTTTSCCT---TCTT----------------
T ss_pred ----------HHh------------------------cCCcCCC----CCCCccccc---CCCC----------------
Confidence 000 0111110 112455677 5555
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. .....+..++++++|+++|++++
T Consensus 250 ---~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~ 319 (438)
T 2iwz_A 250 ---RDGFV-------MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPE 319 (438)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCCEE-------eeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 55665 8999999999999999999999999999999987752 22334567899999999999999
Q ss_pred CCceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------
Q 015003 321 QIDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (414)
Q Consensus 321 DId~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------- 381 (414)
|||++++|++++.. +. .+.+.||....++++++.|..+||+.||+|+..+++++++|+.+.
T Consensus 320 dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~ 399 (438)
T 2iwz_A 320 EISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEF 399 (438)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTC
T ss_pred HcCEEEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC
Confidence 99999999999874 22 234456655557888888999999999999999999999999752
Q ss_pred ----------------CCeeEEeecccccceeeEEEEE
Q 015003 382 ----------------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 ----------------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++++..+++.||+++++||++
T Consensus 400 ~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 400 DLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp CSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 3457788899999999999985
No 24
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=100.00 E-value=2.1e-31 Score=267.72 Aligned_cols=268 Identities=21% Similarity=0.256 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCC--------------------------CCCCcHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi-~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~va~~lg 85 (414)
..+|+.+|+++||+|||+ ++++|| .+++|+..+. ...+..+.+++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 456999999999999999 788888 7888876532 012357889999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++. .....-
T Consensus 157 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~--~~~~~~-------------------------- 206 (412)
T 4ewg_A 157 LK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSG--PAVAVF-------------------------- 206 (412)
T ss_dssp CC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHHH--------------------------
T ss_pred CC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCH--HHHHHH--------------------------
Confidence 95 699999999999999999999999999999999999999653 211100
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
.....+... ...++..|+| |+++
T Consensus 207 -----------------------------------~~~~~l~~~---~~~p~~~~rp---fd~~---------------- 229 (412)
T 4ewg_A 207 -----------------------------------DTLYATSTR---NDEPHLTPRP---FDAK---------------- 229 (412)
T ss_dssp -----------------------------------HTTTCBCCC---TTCGGGCCCT---TBTT----------------
T ss_pred -----------------------------------HHhhccccC---CCCCCCCCCC---CCCC----------------
Confidence 000001100 0112345666 5554
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC---ccccchHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... ....+..++++++|+++|++++||
T Consensus 230 ---~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dI 299 (412)
T 4ewg_A 230 ---RDGLV-------VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAI 299 (412)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGE
T ss_pred ---CCCCc-------eECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 55666 79999999999999999999999999999999887432 123456799999999999999999
Q ss_pred ceeeccccchhH----HHHH-HHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSVV----AIAN-QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~~----~~~~-~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+|+.|...+.. +... .+.++ ++++++..|..+|||.||+|+.++++++++|+.+
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~ 376 (412)
T 4ewg_A 300 AYVNAHGTSTDRGDVAESQATARTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAP 376 (412)
T ss_dssp EEEECCCCCCHHHHHHHHHHHHHHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC
T ss_pred CEEEccCCCCccccHHHHHHHHHHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccc
Confidence 999999998863 3333 33344 2366677788899999999999999999999864
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.+.++++.||+++++||++.
T Consensus 377 ~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 377 LDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp CEECCSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred cccccCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 124567888999999999999874
No 25
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.98 E-value=4.4e-31 Score=266.37 Aligned_cols=272 Identities=22% Similarity=0.255 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------CC-------------Cc-HHH----HHH
Q 015003 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------LG-------------QA-PAR----QAA 81 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------~~-------------~~-~a~----~va 81 (414)
.+|+.+|+++||+|||+++++|| .|++|+..+.+ .+ ++ .+. +++
T Consensus 74 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia 153 (424)
T 1tqy_A 74 SQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVA 153 (424)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHH
Confidence 56999999999999999999999 59999876532 00 11 133 899
Q ss_pred HHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccc
Q 015003 82 LGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD 161 (414)
Q Consensus 82 ~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (414)
..||++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....
T Consensus 154 ~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~----------------------- 207 (424)
T 1tqy_A 154 WAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVVAC----------------------- 207 (424)
T ss_dssp HHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH-----------------------
T ss_pred HhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHHHHH-----------------------
Confidence 999995 699999999999999999999999999999999999999755 322110
Q ss_pred cccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHh
Q 015003 162 VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (414)
Q Consensus 162 ~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (414)
+... +.+..+ ...++..|+| |+++
T Consensus 208 --------------~~~~------------------------~~ls~~---~~~p~~~~rp---fd~~------------ 231 (424)
T 1tqy_A 208 --------------FDAI------------------------RATTAR---NDDPEHASRP---FDGT------------ 231 (424)
T ss_dssp --------------HHHT------------------------TCBCCC---CSCGGGCCCT---TBTT------------
T ss_pred --------------HHhh------------------------ccccCC---CCCCCCCccC---CCCC------------
Confidence 0000 011100 0012345666 5554
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcC
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAG 316 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aG 316 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... ..+....++++++|+++|
T Consensus 232 -------~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ag 297 (424)
T 1tqy_A 232 -------RDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESR 297 (424)
T ss_dssp -------CCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHT
T ss_pred -------CCcee-------eecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 45555 89999999999999999999999999999998877432 222456789999999999
Q ss_pred CCCCCCceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------
Q 015003 317 LEASQIDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------- 380 (414)
Q Consensus 317 l~~~DId~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------- 380 (414)
++++|||++++|++++.. +. .+.+.||....++++++.|..+||+.+++|+..+++++++|+++
T Consensus 298 l~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~ 377 (424)
T 1tqy_A 298 TDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS 377 (424)
T ss_dssp CCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB
T ss_pred CCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCC
Confidence 999999999999999863 33 23444565445677778888899999999999999999999975
Q ss_pred ----------------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 ----------------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 ----------------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.+..+++.||+++++||+..+
T Consensus 378 ~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 378 DPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp BTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 2456788889999999999999754
No 26
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.98 E-value=8.1e-31 Score=263.72 Aligned_cols=271 Identities=21% Similarity=0.188 Sum_probs=208.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
...+|+.+|+++||+|||+++++|| .+++|+..+++ ..+..+.+++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 3567999999999999999999999 78888775432 13457889999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++| +|+|||+|+|.+.. |.....
T Consensus 158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~-~~~~~~--------------------------- 206 (415)
T 1tqy_B 158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD-PWGWVS--------------------------- 206 (415)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS-HHHHHH---------------------------
T ss_pred CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCC-HHHHHH---------------------------
Confidence 95 699999999999999999999999999 99999999998544 322110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
+. ..+.+.. ...++..++| |+++
T Consensus 207 -----------------------~~-----------~~~~ls~----~~~~~~~~~p---fd~~---------------- 229 (415)
T 1tqy_B 207 -----------------------QI-----------ASGRIST----ATDPDRAYLP---FDER---------------- 229 (415)
T ss_dssp -----------------------HH-----------TTSCBCC----CSCGGGSCCT---TSTT----------------
T ss_pred -----------------------HH-----------hccCccC----CCCCCCCcCC---CCCC----------------
Confidence 00 0001110 0001234555 5444
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCC-cceEEEEEEEEeecCCCcccc--chHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQAPEWFTT--APSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~-~~~~~i~g~~~~~~~~~~~~~--~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++|||+++||++.+.+++++. +++++|.|++...+....... +..++++++|+++|++++||
T Consensus 230 ---~~G~~-------~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dI 299 (415)
T 1tqy_B 230 ---AAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDV 299 (415)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGC
T ss_pred ---CCCcc-------eeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHC
Confidence 45555 899999999999999999999 999999999998774332111 67899999999999999999
Q ss_pred ceeeccccchh----HHHHHHHH-cCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSV----VAIANQKL-LGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~----~~~~~~e~-lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+++.|.+++. .+...++. +|-. ++.++..|..+||+.||+|+.++++++++|+.+
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~~g~~--~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~ 377 (415)
T 1tqy_B 300 DVVFADGAGVPELDAAEARAIGRVFGRE--GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGI 377 (415)
T ss_dssp CEEECCCCCSHHHHHHHHHHHHHHHCTT--CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCC
T ss_pred CEEEEeCCCCcCcCHHHHHHHHHHhCCC--CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 99999999984 34433333 4432 366667788899999999999999999999974
Q ss_pred ----------CCCeeEEeecccccceeeEEEEEecc
Q 015003 381 ----------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 381 ----------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
..++.+..+++.||+++++||+..+.
T Consensus 378 ~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~~ 413 (415)
T 1tqy_B 378 DLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFAP 413 (415)
T ss_dssp EECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC--
T ss_pred cccCCCCccCCCCEEEEecCcCCCeEEEEEEecCCC
Confidence 23567888899999999999998654
No 27
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.97 E-value=1.1e-30 Score=262.55 Aligned_cols=266 Identities=22% Similarity=0.266 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC-----------------C---------CcHHHHHHHHCCCC
Q 015003 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANL-----------------G---------QAPARQAALGAGIP 87 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~-----------------~---------~~~a~~va~~lgl~ 87 (414)
.+|+.+|+++||+|||+ +++|. |++|+..+++. . ...+..|+..||++
T Consensus 84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 161 (416)
T 2wge_A 84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGAR 161 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccC
Confidence 36999999999999998 45553 88887765431 1 13678899999994
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 162 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~~----------------------------- 209 (416)
T 2wge_A 162 --AGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIE-ALPIAA----------------------------- 209 (416)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCC-HHHHHH-----------------------------
T ss_pred --CCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccc-hHHHHH-----------------------------
Confidence 799999999999999999999999999999999999999876 321110
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
+. ..+.+... ...++..++| |+++
T Consensus 210 ---------------------~~-----------~~~~l~~~---~~~~~~~~~p---fd~~------------------ 233 (416)
T 2wge_A 210 ---------------------FS-----------MMRAMSTR---NDEPERASRP---FDKD------------------ 233 (416)
T ss_dssp ---------------------HH-----------TTTCBCCC---TTSGGGSCCT---TBTT------------------
T ss_pred ---------------------HH-----------hcchhhcc---ccCCcccccc---cccC------------------
Confidence 00 00000000 0011334555 4443
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++||++++||++.+.+++++.+++++|.|++...+.. ......+.++++++|+++|++++||
T Consensus 234 -~dg~v-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 305 (416)
T 2wge_A 234 -RDGFV-------FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADI 305 (416)
T ss_dssp -CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCcc-------ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHC
Confidence 34444 8999999999999999999999999999999887642 2233466789999999999999999
Q ss_pred ceeeccccchhH----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----------------
Q 015003 323 DYYEINEAFSVV----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~~----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----------------- 381 (414)
|++++|++++.. +...++.+|. .++++++.+..+|||.||+|+.+++++++||+++.
T Consensus 306 d~ve~HgtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~ 383 (416)
T 2wge_A 306 DHVNAHGTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLD 383 (416)
T ss_dssp CEEECCCCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCE
T ss_pred CEEEECCCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 999999999875 5555566643 36888889999999999999999999999999751
Q ss_pred ----------CCeeEEeecccccceeeEEEEE
Q 015003 382 ----------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 ----------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+..+++.||+++++||+.
T Consensus 384 ~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 384 VVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp ECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 2456788899999999999985
No 28
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=7.5e-30 Score=257.70 Aligned_cols=269 Identities=23% Similarity=0.281 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHcCCC---ccccCeEEEEeecCCCC--------------------------CCcHHHHHHHHCCCC
Q 015003 37 ATKLGSIAIECALKRANVK---PLLVQEVFFGNVLSANL--------------------------GQAPARQAALGAGIP 87 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~---~~~Id~vi~g~~~~~~~--------------------------~~~~a~~va~~lgl~ 87 (414)
..+|+.+|+++||+|||++ +++| .+++|+..+++. ....+..|+..||++
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~ 177 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK 177 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC
Confidence 3579999999999999983 3344 478887665430 113678999999995
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 178 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~----------------------------- 225 (434)
T 2gp6_A 178 --AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIE-AVPIAG----------------------------- 225 (434)
T ss_dssp --SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCC-HHHHHH-----------------------------
T ss_pred --CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------
Confidence 799999999999999999999999999999999999999876 321110
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
+ ++.++ .+.++ ...++..|+| |+.+
T Consensus 226 ---------------------~---~~~~~-------~ls~~---~~~p~~~~~p---fd~~------------------ 250 (434)
T 2gp6_A 226 ---------------------F---AQMRI-------VMSTN---NDDPAGACRP---FDRD------------------ 250 (434)
T ss_dssp ---------------------H---HTTTS-------SCCCC---TTCTTTSCCS---SBTT------------------
T ss_pred ---------------------H---HHHHH-------HhcCC---CCCCCCceec---cccc------------------
Confidence 0 00000 00000 0012345666 5544
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|++ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++||
T Consensus 251 -~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 322 (434)
T 2gp6_A 251 -RDGFV-------FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDI 322 (434)
T ss_dssp -CCCCC-------BBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTE
T ss_pred -CCCcc-------eecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHc
Confidence 44554 89999999999999998889899999999998876432 223356789999999999999999
Q ss_pred ceeeccccchhH-HHHH----HHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------
Q 015003 323 DYYEINEAFSVV-AIAN----QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~~-~~~~----~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------- 381 (414)
|++++|...+.. .... .+.+| .+++|++++|..+|||.||+|+.+++++++||+++.
T Consensus 323 d~ve~Hgtgt~~~D~~E~~al~~~fg--~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 400 (434)
T 2gp6_A 323 DHVNAHATGTQVGDLAEGRAINNALG--GNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDL 400 (434)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHT--TCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCC
T ss_pred CEEEEeCCcCccchHHHHHHHHHHhc--cCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 999999655532 1222 22333 337999999999999999999999999999999762
Q ss_pred -----------CCeeEEeecccccceeeEEEEE
Q 015003 382 -----------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 -----------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+..+++.||+++++||+.
T Consensus 401 ~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 401 DVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp EECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 2467788899999999999985
No 29
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.97 E-value=1.4e-30 Score=263.08 Aligned_cols=273 Identities=21% Similarity=0.259 Sum_probs=208.1
Q ss_pred CHHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCCC-----------------C---------CCcHHHHHHHHC
Q 015003 36 SATKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGA 84 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi-~~~~Id----~vi~g~~~~~~-----------------~---------~~~~a~~va~~l 84 (414)
...+|+.+|+++||+|||+ ++++|| .+++|+..+.. . ....+..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 4568999999999999999 998888 58888765431 0 124678999999
Q ss_pred CCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc
Q 015003 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (414)
Q Consensus 85 gl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (414)
|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 167 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~-------------------------- 217 (431)
T 2ix4_A 167 GFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID-ALSVAG-------------------------- 217 (431)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH--------------------------
T ss_pred CCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH--------------------------
Confidence 995 699999999999999999999999999999999999999876 321110
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
+.+. +.+..++ ...++..++| |+.+
T Consensus 218 -----------~~~~------------------------~~ls~~~--~~~~~~~~~p---fd~~--------------- 242 (431)
T 2ix4_A 218 -----------FSRS------------------------RALSTKF--NSSPQEASRP---FDCD--------------- 242 (431)
T ss_dssp -----------HHHT------------------------TCBCCTT--TTCGGGSCCT---TBTT---------------
T ss_pred -----------HHhc------------------------cccCccc--cCCccccccc---CCCC---------------
Confidence 0000 0000000 0001234455 4433
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCC
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEA 319 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~ 319 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. ........++++++|+++|+++
T Consensus 243 ----~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~ 311 (431)
T 2ix4_A 243 ----RDGFV-------IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCP 311 (431)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred ----CCCce-------eecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 44444 8999999999999999999999999999999887642 2233456789999999999999
Q ss_pred CCCceeeccccchhH----HH-HHHHHcCCC--CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----------
Q 015003 320 SQIDYYEINEAFSVV----AI-ANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------- 381 (414)
Q Consensus 320 ~DId~~~~hd~~~~~----~~-~~~e~lGl~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----------- 381 (414)
+|||++++|.+++.. +. .+.+.++.. ..++++++++..+||+.|++|+..++++++||+++.
T Consensus 312 ~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~ 391 (431)
T 2ix4_A 312 NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPD 391 (431)
T ss_dssp GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBC
T ss_pred HHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCC
Confidence 999999999988752 22 223334432 146788888999999999999999999999999752
Q ss_pred -----------------CCeeEEeecccccceeeEEEEE
Q 015003 382 -----------------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 -----------------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+.++++.||+++.+||+.
T Consensus 392 p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 392 PIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp TTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 2467788899999999999985
No 30
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.97 E-value=1.2e-29 Score=256.21 Aligned_cols=268 Identities=24% Similarity=0.316 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCCCC
Q 015003 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGIP 87 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lgl~ 87 (414)
.+|+.+|+++||+|||+++++|| .+++|+..++. .....+..|+..+|++
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 173 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN 173 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC
Confidence 37999999999999999999999 58888765431 0113678899999995
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 174 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~----------------------------- 221 (430)
T 1ox0_A 174 --GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PFAIAG----------------------------- 221 (430)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH-----------------------------
T ss_pred --CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------
Confidence 699999999999999999999999999999999999998765 322110
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
+.. .+.+.. ...++..|+| |+++
T Consensus 222 --------~~~------------------------~~~ls~----~~~p~~~~~p---Fd~~------------------ 244 (430)
T 1ox0_A 222 --------FQA------------------------LTALST----TEDPTRASIP---FDKD------------------ 244 (430)
T ss_dssp --------HHH------------------------TTCBCC----CSSTTSSSCT---TBTT------------------
T ss_pred --------HHh------------------------CCCccC----CCCCCCCCCC---CCCC------------------
Confidence 000 001110 0112345566 5544
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++||
T Consensus 245 -~~g~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 316 (430)
T 1ox0_A 245 -RNGFV-------MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQV 316 (430)
T ss_dssp -CCSBC-------BCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCcc-------ccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHc
Confidence 45555 89999999999999999999999999999998876422 223456789999999999999999
Q ss_pred ceeeccccchhHHH-----HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------
Q 015003 323 DYYEINEAFSVVAI-----ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~~~~-----~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------- 381 (414)
|+|++|++++...- .+.+.+|- ++.++..|..+||+.||+|+..+++++++|+++.
T Consensus 317 d~ve~Hgtgt~~~D~~E~~al~~~~g~---~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 393 (430)
T 1ox0_A 317 AYVNAHGTSTPANEKGESGAIVAVLGK---EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEA 393 (430)
T ss_dssp CCEECCCCSCHHHHHHHHHHHHHHHCS---SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCS
T ss_pred CEEEEeCCcCcccCHHHHHHHHHHhCC---CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 99999999997531 23344553 3334444666899999999999999999999752
Q ss_pred -----------CCeeEEeecccccceeeEEEEEec
Q 015003 382 -----------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 -----------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.+..+++.||+++++||+...
T Consensus 394 ~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 394 NVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp EECBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred ccCCCCCcCCCCCEEEEeCccCCCceEEEEEeecC
Confidence 346778889999999999998743
No 31
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.97 E-value=1.1e-29 Score=254.56 Aligned_cols=269 Identities=20% Similarity=0.246 Sum_probs=207.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCe-----EEEEeecCCC-------------C--------------CCcHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQE-----VFFGNVLSAN-------------L--------------GQAPARQAALG 83 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~-----vi~g~~~~~~-------------~--------------~~~~a~~va~~ 83 (414)
...+|+.+|+++||+|||+++++||. |++|+..+.+ . ....+.+++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 35679999999999999999999986 9999876542 1 13467889999
Q ss_pred CCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccc
Q 015003 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (414)
Q Consensus 84 lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (414)
+|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |....
T Consensus 150 lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~~-------------------------- 200 (406)
T 2vba_A 150 FKIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW-EMACE-------------------------- 200 (406)
T ss_dssp TTCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH-HHHHH--------------------------
T ss_pred ccCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-hHHHH--------------------------
Confidence 9995 799999999999999999999999999999999999999865 21110
Q ss_pred cCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcC
Q 015003 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (414)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 243 (414)
+.+.| .+..+. ...++..|+| |+++
T Consensus 201 ------------~~~~~------------------------~ls~~~--~~~p~~~~~p---fd~~-------------- 225 (406)
T 2vba_A 201 ------------FDAMG------------------------ALSTKY--NDTPEKASRT---YDAH-------------- 225 (406)
T ss_dssp ------------HHHTT------------------------CBCCSC--TTSGGGSCCT---TBTT--------------
T ss_pred ------------Hhhcc------------------------cccccc--CCCCccccCc---CcCC--------------
Confidence 00111 111000 0002345677 6665
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc---cccchHHHHHHHHHHcCCCCC
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|++ ++|||+++||++.+.+++++.+++++|.|++...+.... ...+..++++++|+++| +
T Consensus 226 -----~~G~v-------~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~ 290 (406)
T 2vba_A 226 -----RDGFV-------IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---T 290 (406)
T ss_dssp -----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---S
T ss_pred -----CCceE-------eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---C
Confidence 56666 799999999999999999999999999999998874321 13456789999999999 9
Q ss_pred CCceeeccccchhH----H-HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------
Q 015003 321 QIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (414)
Q Consensus 321 DId~~~~hd~~~~~----~-~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------- 381 (414)
|||+++.|++++.. + ..+.+.||... +++++.|..+||+.+|+|+..+++++++|+++.
T Consensus 291 dId~ve~HgtgT~~gD~~E~~al~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~ 368 (406)
T 2vba_A 291 PIDYLNSHGTSTPVGDVKELAAIREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA 368 (406)
T ss_dssp CCCEEECCCCSCHHHHHHHHHHHHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTC
T ss_pred CccEEEeeCccCcccCHHHHHHHHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCc
Confidence 99999999999874 2 22334455432 556666777999999999999999999999752
Q ss_pred -------------CCeeEEeecccccceeeEEEEEec
Q 015003 382 -------------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 -------------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.+..+++.||+++.+||+..+
T Consensus 369 ~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 369 AGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLK 405 (406)
T ss_dssp TTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC-
T ss_pred cccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeCC
Confidence 245678889999999999998753
No 32
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.97 E-value=8.4e-30 Score=246.73 Aligned_cols=258 Identities=16% Similarity=0.123 Sum_probs=204.7
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+|++.+++...++.+..+|+.+|+++||+++|+++++||.+++++..+++..+..+..++..+|+++ +++++++++|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas 114 (313)
T 1zow_A 36 MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGK-VASMDQLAACSG 114 (313)
T ss_dssp HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCS-CCEEEEECGGGH
T ss_pred hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CcEEEECCcCHH
Confidence 5677766666678899999999999999999999999999999998877767788999999999974 899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.||..|+.+|++|++++|||+|+|.++.. ..
T Consensus 115 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-~~---------------------------------------------- 147 (313)
T 1zow_A 115 FMYSMITAKQYVQSGDYHNILVVGADKLSKI-TD---------------------------------------------- 147 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-CC----------------------------------------------
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEcccccc-cC----------------------------------------------
Confidence 9999999999999999999999999987651 00
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
| +++ . ++..+
T Consensus 148 ------------------------------~-------------~d~--------------------~-------~~~~~ 157 (313)
T 1zow_A 148 ------------------------------L-------------TDR--------------------S-------TAVLF 157 (313)
T ss_dssp ------------------------------T-------------TCH--------------------H-------HHTTB
T ss_pred ------------------------------c-------------ccc--------------------c-------ceeee
Confidence 0 000 0 12237
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEE-EEEEEEeecC---CC-----cc-c--------cchHHHHHHHHHHcCCCCCCCc
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAK-IRGFADAAQA---PE-----WF-T--------TAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~-i~g~~~~~~~---~~-----~~-~--------~~~~~a~~~al~~aGl~~~DId 323 (414)
+|||+|+||++.+. +.+++.. +.+.+...+. +. .+ + ....++++++|+++|++++|||
T Consensus 158 gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did 233 (313)
T 1zow_A 158 GDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDID 233 (313)
T ss_dssp CEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCS
T ss_pred ccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999987642 1222221 2221111100 10 00 0 1345789999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|++|++++.....+.+.||++++++..+ +..+||+.++++...+.+++++-+.+++++.+...+++|.++.+++|+.
T Consensus 234 ~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 234 LFIPHQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp EEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred EEEEcCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 99999999999888999999998877643 7789999999999999998887666678889998899999999999986
No 33
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.96 E-value=7.3e-29 Score=242.41 Aligned_cols=253 Identities=22% Similarity=0.192 Sum_probs=203.1
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+|++.+++...++.+..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++++|+|
T Consensus 50 rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s 129 (333)
T 4dfe_A 50 RTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSG 129 (333)
T ss_dssp HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGH
T ss_pred hcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHH
Confidence 35666665556678999999999999999999999999999999998877778899999999999667999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.||..|..+|++|.+++|||+|+|.++. +.
T Consensus 130 ~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-~~----------------------------------------------- 161 (333)
T 4dfe_A 130 FAYAVATADSFIRSGQHRTALVIGAETFSR-IL----------------------------------------------- 161 (333)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GC-----------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeecccc-cc-----------------------------------------------
Confidence 999999999999999999999999999876 10
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
+.++ + ..+..+
T Consensus 162 ---------------------------------------------~~~d------------------~------~~~~lf 172 (333)
T 4dfe_A 162 ---------------------------------------------DFKD------------------R------TTCVLF 172 (333)
T ss_dssp ---------------------------------------------CTTC------------------T------TTTTTB
T ss_pred ---------------------------------------------Cccc------------------c------cceeee
Confidence 0000 0 023448
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--------C-----------Cccc-----------cchHHHHHHH
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P-----------EWFT-----------TAPSLAIPKA 311 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--------~-----------~~~~-----------~~~~~a~~~a 311 (414)
+|||+|+||+..+. ..+ .+....++. + ..+. ....++++++
T Consensus 173 GDGA~A~vl~~~~~-----~~i----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 243 (333)
T 4dfe_A 173 GDGAGAVILQASDE-----PGV----LASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEA 243 (333)
T ss_dssp CEEEEEEEEEEESS-----CSE----EEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccEEEEEEEcCC-----CCe----EEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHH
Confidence 99999999997541 111 111111110 0 0000 1224788999
Q ss_pred HHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecc
Q 015003 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~ 391 (414)
|+++|++++|||+|.+|+.+......+.+.||++++++..+ +..+||+..+|-.+.+.+++++-+.+.|++.+...++
T Consensus 244 l~~~gl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G 321 (333)
T 4dfe_A 244 LEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVG 321 (333)
T ss_dssp HHHTTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEE
T ss_pred HHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEc
Confidence 99999999999999999999999999999999999988765 6678999999988888888776555678888888888
Q ss_pred cccceeeEEEE
Q 015003 392 GGGGASALVLE 402 (414)
Q Consensus 392 ~gg~~~a~vl~ 402 (414)
.|-++.+++|+
T Consensus 322 ~G~t~~~~ll~ 332 (333)
T 4dfe_A 322 GGFTWGASVIR 332 (333)
T ss_dssp TTTEEEEEEEE
T ss_pred hhheeEEEEEE
Confidence 88899999987
No 34
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.96 E-value=9.9e-29 Score=238.69 Aligned_cols=240 Identities=19% Similarity=0.168 Sum_probs=194.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
.+..+|+.+|+++||+++|+++++||.+++++..+++..++.+..++..||++. .++++++++|+|++.||..|+.+|+
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFIK 126 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999998877767789999999999974 7999999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|++++|||+|+|.++..
T Consensus 127 ~g~~~~vlv~g~e~~s~~-------------------------------------------------------------- 144 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLSEA-------------------------------------------------------------- 144 (309)
T ss_dssp TTSCSEEEEEEEEEGGGT--------------------------------------------------------------
T ss_pred CCCCCEEEEEEecccccc--------------------------------------------------------------
Confidence 999999999999987641
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
++++ ...++..++|||+|+||++.+
T Consensus 145 -------------------------------~~~~------------------------~~~~~~~~gdGaaA~vL~~~~ 169 (309)
T 2ebd_A 145 -------------------------------VDWE------------------------DRSTCVLFGDGAGAVVVTRSE 169 (309)
T ss_dssp -------------------------------CCTT------------------------CTTTTTTBCEEEEEEEEEECS
T ss_pred -------------------------------cCcc------------------------chhhccccccccEEEEEEecC
Confidence 0000 001233489999999999765
Q ss_pred HHHHcCCcceEEEEEEEEeecC--------CC----c-ccc--------chHHHHHHHHHHcCCCCCCCceeeccccchh
Q 015003 275 KALELGLQVIAKIRGFADAAQA--------PE----W-FTT--------APSLAIPKAIANAGLEASQIDYYEINEAFSV 333 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~--------~~----~-~~~--------~~~~a~~~al~~aGl~~~DId~~~~hd~~~~ 333 (414)
.+ .. |.+....++. +. . .+. ...++++++|+++|++++|||++++|++++.
T Consensus 170 ~~----~~----i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~ 241 (309)
T 2ebd_A 170 DK----SD----ILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVR 241 (309)
T ss_dssp SS----CE----EEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH
T ss_pred CC----Cc----eeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 32 11 2222222221 10 0 010 3467999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 334 VAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 334 ~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
....+.+.||++++++..+ +..+||+.+++++..+.+++++-+.+++++.+...++.|.++.+++|+
T Consensus 242 ~~~~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 242 IINALAEKLNIPKEKVFVN--IQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp HHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHhCCCHHHhhhh--HhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEE
Confidence 8888899999998877543 778999999999999999988755567888888888888899999887
No 35
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.96 E-value=3.5e-28 Score=265.03 Aligned_cols=268 Identities=21% Similarity=0.267 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCCC------------------CcHHHHHHHHCCCCCCcceee
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG------------------QAPARQAALGAGIPNSVVCTT 94 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~~------------------~~~a~~va~~lgl~~~~~~~~ 94 (414)
..+|+.+++++||+|||+++++||. |++|+..+++.. ...+..|+..+|++ +|+++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE--GPSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC--SCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC--CCEEE
Confidence 4579999999999999999999995 888887665421 13677899999995 69999
Q ss_pred EccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHH
Q 015003 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (414)
Q Consensus 95 v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (414)
++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~-p~~~~~------------------------------------ 215 (915)
T 2qo3_A 173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMAT-PGVFVD------------------------------------ 215 (915)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSS-THHHHH------------------------------------
T ss_pred ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcC-HHHHHH------------------------------------
Confidence 9999999999999999999999999999999999876 422110
Q ss_pred HHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccc
Q 015003 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 175 ~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (414)
+ ...+.+. ++..|+| |+.+ .+|++
T Consensus 216 --------------~-----------~~~~~ls--------~~g~~~~---Fd~~-------------------adG~v- 239 (915)
T 2qo3_A 216 --------------F-----------SRQRALA--------ADGRSKA---FGAG-------------------ADGFG- 239 (915)
T ss_dssp --------------H-----------HTTTCBC--------SSCCCCT---TBTT-------------------CCCBC-
T ss_pred --------------H-----------hhhcccC--------CCCCccc---ccCC-------------------CCcee-
Confidence 0 0001111 2445666 6555 55666
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
++||++++||++.+.+++.+.++++.|.|++...+.... ...+..++++++|+++|++++|||+|++|+
T Consensus 240 ------~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~Hg 313 (915)
T 2qo3_A 240 ------FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHG 313 (915)
T ss_dssp ------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCC
T ss_pred ------ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecC
Confidence 899999999999999999999999999999988864322 123457899999999999999999999998
Q ss_pred cchhH-----HHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------------
Q 015003 330 AFSVV-----AIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------------- 381 (414)
Q Consensus 330 ~~~~~-----~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------------- 381 (414)
+++.. ...+.+.+|.. ..+++++++|.++||+.+++|+..+++++++|+++.
T Consensus 314 tgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~ 393 (915)
T 2qo3_A 314 TGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGG 393 (915)
T ss_dssp CCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSS
T ss_pred CCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCc
Confidence 87643 23345667764 247999999999999999999999999999998741
Q ss_pred ---------------CCeeEEeecccccceeeEEEEEec
Q 015003 382 ---------------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 ---------------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.++.+++.||+++.+|||...
T Consensus 394 ~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 394 VALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp EEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred eeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 245678889999999999999764
No 36
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.96 E-value=4.4e-29 Score=242.70 Aligned_cols=258 Identities=20% Similarity=0.119 Sum_probs=201.4
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++.+++...++.+..+|+.+|+++||+++|+++++||.+++++..++...+..+..++..+|+ ++++++++++|+|+
T Consensus 36 ~Gi~~r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~ 113 (322)
T 1ub7_A 36 TGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPGW 113 (322)
T ss_dssp TCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHH
T ss_pred cCceEEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHH
Confidence 4454444344568999999999999999999999999999999888766567789999999999 48999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|+.+|++|++++|||+|+|.++... .
T Consensus 114 ~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~--~---------------------------------------------- 145 (322)
T 1ub7_A 114 IYALAQAHALVEAGLAQKVLAVGAEALSKII--D---------------------------------------------- 145 (322)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGGTS--C----------------------------------------------
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEechhcccc--C----------------------------------------------
Confidence 9999999999999999999999999876410 0
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
| +++ .++.+ ++
T Consensus 146 -----------------------------~-------------~d~--------------------~~~~~-------~G 156 (322)
T 1ub7_A 146 -----------------------------W-------------NDR--------------------ATAVL-------FG 156 (322)
T ss_dssp -----------------------------T-------------TCH--------------------HHHTT-------BC
T ss_pred -----------------------------h-------------hhc--------------------cccee-------ec
Confidence 0 000 11122 79
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEE-EEEEEeecC----------CCc---------cc--------cchHHHHHHHHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKI-RGFADAAQA----------PEW---------FT--------TAPSLAIPKAIAN 314 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i-~g~~~~~~~----------~~~---------~~--------~~~~~a~~~al~~ 314 (414)
|||+|+||++.+. +.+++... .+.+...+. |.. .+ ....++++++|++
T Consensus 157 dGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ 232 (322)
T 1ub7_A 157 DGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEK 232 (322)
T ss_dssp CEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997642 22233222 111110000 111 00 2346789999999
Q ss_pred cCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccccc
Q 015003 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGG 394 (414)
Q Consensus 315 aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg 394 (414)
+|++++|||++++|+.++.....+.+.||++++++.. .+..+||+.++++...+.+++++-+.+.+++.+...++.|+
T Consensus 233 agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~--~~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~ 310 (322)
T 1ub7_A 233 AGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAV--NVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGL 310 (322)
T ss_dssp HTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTT
T ss_pred cCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHH--HHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhh
Confidence 9999999999999999999888889999999887754 37789999999999999888877666678899999999999
Q ss_pred ceeeEEEEEec
Q 015003 395 GASALVLELMQ 405 (414)
Q Consensus 395 ~~~a~vl~~~~ 405 (414)
++.+++|+..+
T Consensus 311 ~~~~~vl~~~~ 321 (322)
T 1ub7_A 311 TWAAAVLTWGG 321 (322)
T ss_dssp EEEEEEEECCC
T ss_pred eeEEEEEEeCC
Confidence 99999998743
No 37
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.96 E-value=5.4e-28 Score=263.60 Aligned_cols=268 Identities=25% Similarity=0.294 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCCC-------------------CcHHHHHHHHCCCCCCcceee
Q 015003 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG-------------------QAPARQAALGAGIPNSVVCTT 94 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~~-------------------~~~a~~va~~lgl~~~~~~~~ 94 (414)
..|+.+++++||+|||+++++||. |++|+...++.. ...+..++..+|++ +|+++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC--CCeEe
Confidence 358999999999999999999995 888887765421 13567899999995 69999
Q ss_pred EccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHH
Q 015003 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (414)
Q Consensus 95 v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (414)
++++|+|++.||++|+++|++|++|++||+|+|.++. |.....-
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~-p~~~~~~----------------------------------- 238 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSS-PGAFTEF----------------------------------- 238 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-THHHHHH-----------------------------------
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccC-hhhhHhh-----------------------------------
Confidence 9999999999999999999999999999999999887 3221100
Q ss_pred HHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccc
Q 015003 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 175 ~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (414)
...+.+. ++..|+| |+.+ .+|++
T Consensus 239 --------------------------~~~~~ls--------~~g~~~p---Fd~~-------------------adG~~- 261 (917)
T 2hg4_A 239 --------------------------RSQGGLA--------ADGRCKP---FSKA-------------------ADGFG- 261 (917)
T ss_dssp --------------------------TTSSCBC--------TTSCCCT---TBTT-------------------CCCBC-
T ss_pred --------------------------hhccCcC--------CccccCc---cccc-------------------ccCCC-
Confidence 0001111 1345666 5444 44555
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc-----ccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
++||++++||++.+.+++.+.++++.|.|++...+..... ..+..++++++|+++|++++|||++++|+
T Consensus 262 ------~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHg 335 (917)
T 2hg4_A 262 ------LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHG 335 (917)
T ss_dssp ------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred ------CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeecc
Confidence 8999999999999999999999999999999988754322 22446899999999999999999999999
Q ss_pred cchhH-----HHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------------
Q 015003 330 AFSVV-----AIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------------- 381 (414)
Q Consensus 330 ~~~~~-----~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------------- 381 (414)
+++.. ...+.+.+|.. ..+++++++|.++||+.+++|+..+++++++|+++.
T Consensus 336 tgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~ 415 (917)
T 2hg4_A 336 TGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGA 415 (917)
T ss_dssp CCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---C
T ss_pred CCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccc
Confidence 99963 22233445643 247899999999999999999999999999998641
Q ss_pred ---------------CCeeEEeecccccceeeEEEEEecc
Q 015003 382 ---------------GKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 382 ---------------~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
.++.++.+++.||+++.+|||....
T Consensus 416 ~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 455 (917)
T 2hg4_A 416 VSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPE 455 (917)
T ss_dssp CEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred eeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCCc
Confidence 2456788899999999999997543
No 38
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.96 E-value=7.1e-28 Score=234.25 Aligned_cols=252 Identities=16% Similarity=0.137 Sum_probs=203.3
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+|++.+++...++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||++ ++++++++.+|+|
T Consensus 43 ~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s 121 (323)
T 3il3_A 43 RSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTG 121 (323)
T ss_dssp HTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGH
T ss_pred hcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHH
Confidence 567777766667899999999999999999999999999999999988777788999999999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.||..|..+|++|.+++|||+++|.++.. ..+
T Consensus 122 ~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-~~~--------------------------------------------- 155 (323)
T 3il3_A 122 FVYALSVADQFIRAGKVKKALVIGSDLNSRK-LDE--------------------------------------------- 155 (323)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-CCT---------------------------------------------
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEeeccccc-cCc---------------------------------------------
Confidence 9999999999999999999999999998761 000
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
.| + ..+..+
T Consensus 156 ----------------------------------------------~d-------------------~------~~~~lf 164 (323)
T 3il3_A 156 ----------------------------------------------TD-------------------R------STVVLF 164 (323)
T ss_dssp ----------------------------------------------TC-------------------T------TTTTTB
T ss_pred ----------------------------------------------cc-------------------c------cccccc
Confidence 00 1 023448
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--------C---------Cccc-c----------chHHHHHHHHH
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P---------EWFT-T----------APSLAIPKAIA 313 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--------~---------~~~~-~----------~~~~a~~~al~ 313 (414)
||||+|+||+..+ . .. +.+....++. + ..+. . ...++++++|+
T Consensus 165 GDGA~A~vl~~~~---~--~~----i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~ 235 (323)
T 3il3_A 165 GDGAGAVILEASE---Q--EG----IISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLL 235 (323)
T ss_dssp CEEEEEEEEEEES---S--CC----EEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEEEcC---C--CC----eEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999754 1 11 1111111110 0 0000 0 12467889999
Q ss_pred HcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccc
Q 015003 314 NAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG 393 (414)
Q Consensus 314 ~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~g 393 (414)
++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.++|++.+...++.|
T Consensus 236 ~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G 313 (323)
T 3il3_A 236 ANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVT--LDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGG 313 (323)
T ss_dssp TTTCCTTTCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETT
T ss_pred HcCCCHHHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhcc--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehh
Confidence 999999999999999999999999999999999988765 567899999998888888877656667888888888888
Q ss_pred cceeeEEEE
Q 015003 394 GGASALVLE 402 (414)
Q Consensus 394 g~~~a~vl~ 402 (414)
.++.+++|+
T Consensus 314 ~t~~~~~l~ 322 (323)
T 3il3_A 314 WTWGSALVR 322 (323)
T ss_dssp TEEEEEEEE
T ss_pred heeEEEEEE
Confidence 899999987
No 39
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.96 E-value=1.5e-28 Score=240.26 Aligned_cols=249 Identities=22% Similarity=0.167 Sum_probs=195.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHH
Q 015003 30 GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (414)
Q Consensus 30 ~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A 109 (414)
...++.+..+|+.+|+++||+++|+++++||.+++++..+++..+..+..++..||++ ++++++++++|+|++.||..|
T Consensus 54 ~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A 132 (335)
T 1u6e_A 54 FAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAA 132 (335)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHH
Confidence 3445789999999999999999999999999999999888777788999999999996 589999999999999999999
Q ss_pred HHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHH
Q 015003 110 AQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSY 189 (414)
Q Consensus 110 ~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~ 189 (414)
+.+|++|.+++|||+|+|.++..
T Consensus 133 ~~~i~~g~~~~vLv~g~e~~s~~--------------------------------------------------------- 155 (335)
T 1u6e_A 133 ADMIRGGGAATMLVVGTEKLSPT--------------------------------------------------------- 155 (335)
T ss_dssp HHHHHHTSCSSEEEEEEEECGGG---------------------------------------------------------
T ss_pred HHHHHcCCCCEEEEEEEcccccc---------------------------------------------------------
Confidence 99999999999999999998641
Q ss_pred HHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEE
Q 015003 190 AIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALV 269 (414)
Q Consensus 190 a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~v 269 (414)
++++ ...++..++|||+|+|
T Consensus 156 ------------------------------------~~~~------------------------d~~~~~~~gDGA~A~v 175 (335)
T 1u6e_A 156 ------------------------------------IDMY------------------------DRGNCFIFADGAAAVV 175 (335)
T ss_dssp ------------------------------------CCTT------------------------CTTTTTTBCEEEEEEE
T ss_pred ------------------------------------cCcc------------------------ccccceEeccccEEEE
Confidence 0000 0013445899999999
Q ss_pred EeCHHHHHHcCCcceEEEEE-EEEeec-------------CCC----cc---c--------cchHHHHHHHHHHcCCCCC
Q 015003 270 LVSGVKALELGLQVIAKIRG-FADAAQ-------------APE----WF---T--------TAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 270 L~s~~~a~~~~~~~~~~i~g-~~~~~~-------------~~~----~~---~--------~~~~~a~~~al~~aGl~~~ 320 (414)
|++.+. .+ ++..+.+ .+...+ .+. .+ + ....++++++|+++|++++
T Consensus 176 l~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~ 250 (335)
T 1u6e_A 176 VGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPD 250 (335)
T ss_dssp EEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred EEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 987542 11 1112211 110000 000 00 0 1235789999999999999
Q ss_pred CCceeeccccchhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeE
Q 015003 321 QIDYYEINEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399 (414)
Q Consensus 321 DId~~~~hd~~~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~ 399 (414)
|||++++|++++.....+.+.||++++ ++..+ +..+||+.+++....+.++..+-+.+.+++.+...+++|.++.++
T Consensus 251 dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~ 328 (335)
T 1u6e_A 251 QIDVFVPHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQ 328 (335)
T ss_dssp GCCEEEECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEE
T ss_pred HCCEEEECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEE
Confidence 999999999999999999999999988 66544 567899999998877777666544456788899889999999999
Q ss_pred EEEE
Q 015003 400 VLEL 403 (414)
Q Consensus 400 vl~~ 403 (414)
+|+.
T Consensus 329 vl~~ 332 (335)
T 1u6e_A 329 VVRM 332 (335)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9986
No 40
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.96 E-value=1.2e-27 Score=235.65 Aligned_cols=260 Identities=17% Similarity=0.058 Sum_probs=205.5
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+...++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++++|+++
T Consensus 52 tGI~~R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~ 131 (354)
T 4efi_A 52 IGVNRRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGY 131 (354)
T ss_dssp HCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHH
T ss_pred cCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHH
Confidence 44555554556789999999999999999999999999999999988777889999999999996579999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|..+|++|.+++|||+++|.++.. .
T Consensus 132 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-~------------------------------------------------ 162 (354)
T 4efi_A 132 PQALWLGMNLIQTGAAKRVLLAVGDTISKM-I------------------------------------------------ 162 (354)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGGG-C------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEechhccc-C------------------------------------------------
Confidence 999999999999999999999999998761 0
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+.+ +.. .+..+|
T Consensus 163 --------------------------------------------~~~---------------------d~~---~~~lfG 174 (354)
T 4efi_A 163 --------------------------------------------DPT---------------------DRS---TSLLFG 174 (354)
T ss_dssp --------------------------------------------CTT---------------------CHH---HHTTBC
T ss_pred --------------------------------------------Ccc---------------------ccc---cccccc
Confidence 000 000 123389
Q ss_pred CceeEEEEeCHHHHHHcCCcce-EEEEEEEEeec---------CCC--------------ccc-----------cchHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVI-AKIRGFADAAQ---------APE--------------WFT-----------TAPSLA 307 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~-~~i~g~~~~~~---------~~~--------------~~~-----------~~~~~a 307 (414)
|||+|+||+..+.. ..+ ..+...+...+ .|. .+. ....++
T Consensus 175 DGA~A~vl~~~~~~-----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 249 (354)
T 4efi_A 175 DAGTMTALETSNGD-----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKL 249 (354)
T ss_dssp CEEEEEEEEECCSC-----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHH
T ss_pred cceeEEEEeecCCC-----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHH
Confidence 99999999875421 111 11111110000 000 000 011357
Q ss_pred HHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 308 IPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 308 ~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.++|++.+.
T Consensus 250 i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll 327 (354)
T 4efi_A 250 VSRTLDIAGRDKDSYDAFLFHQANLFMLKHLAKKAGLPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKEETLQLGM 327 (354)
T ss_dssp HHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHTTCCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEE
T ss_pred HHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHhCcCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEE
Confidence 889999999999999999999999999999999999999987764 677899999999999999988777777888888
Q ss_pred eecccccceeeEEEEEecc
Q 015003 388 GICNGGGGASALVLELMQA 406 (414)
Q Consensus 388 ~~~~~gg~~~a~vl~~~~~ 406 (414)
..++.|.++.+++|+..+-
T Consensus 328 ~~fG~G~t~~~~ll~~~~~ 346 (354)
T 4efi_A 328 FGFGVGYSWASAALAVGPL 346 (354)
T ss_dssp EEEETTTEEEEEEEEECCC
T ss_pred EEEchhhhheeeEEEECCc
Confidence 8899999999999998654
No 41
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.96 E-value=5.1e-28 Score=234.67 Aligned_cols=255 Identities=17% Similarity=0.132 Sum_probs=199.9
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++.+++-..++.+..+|+.+|+++||+++|+++++||.+++|+..+++..+..+.+++..+|+++ +|+++++++|+|+
T Consensus 37 ~Gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas~ 115 (317)
T 1hnj_A 37 TGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG-CPAFDVAAACAGF 115 (317)
T ss_dssp HCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS-SCEEEECCGGGHH
T ss_pred hCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CeEEeeCcccHHH
Confidence 334344333456899999999999999999999999999999998887767789999999999974 8999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|+.+|++|.+++|||+|+|.++. ..
T Consensus 116 ~~al~~A~~~i~~g~~~~vlv~g~e~~s~-~~------------------------------------------------ 146 (317)
T 1hnj_A 116 TYALSVADQYVKSGAVKYALVVGSDVLAR-TC------------------------------------------------ 146 (317)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECHHH-HS------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEechhcc-cC------------------------------------------------
Confidence 99999999999999999999999998654 00
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
++++ . .+|.+ ++
T Consensus 147 --------------------------------------------~~~d------~-----------~~~~~-------~G 158 (317)
T 1hnj_A 147 --------------------------------------------DPTD------R-----------GTIII-------FG 158 (317)
T ss_dssp --------------------------------------------CTTC------H-----------HHHTT-------BC
T ss_pred --------------------------------------------Cchh------c-----------cccee-------ec
Confidence 0000 0 01123 79
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEE-EEEeec---CCCc-------------ccc--------chHHHHHHHHHHcCC
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRG-FADAAQ---APEW-------------FTT--------APSLAIPKAIANAGL 317 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g-~~~~~~---~~~~-------------~~~--------~~~~a~~~al~~aGl 317 (414)
|||+|+||++.+. .++++.+.+ .+...+ .+.. .+. ...++++++|+++|+
T Consensus 159 dGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl 233 (317)
T 1hnj_A 159 DGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNL 233 (317)
T ss_dssp CEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999987642 234444433 111101 0110 011 335789999999999
Q ss_pred CCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccccccee
Q 015003 318 EASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGAS 397 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~ 397 (414)
+++|||+|++|+.++.....+.+.||++++++.. .+..+||+.++++...+.+++++-+.++|++.+...++.|.++.
T Consensus 234 ~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~--~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~ 311 (317)
T 1hnj_A 234 DRSQLDWLVPHQANLRIISATAKKLGMSMDNVVV--TLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWG 311 (317)
T ss_dssp CGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEE
T ss_pred CHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHh--hHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeE
Confidence 9999999999999999988899999999887753 47789999999999999888776555678888988899888999
Q ss_pred eEEEE
Q 015003 398 ALVLE 402 (414)
Q Consensus 398 a~vl~ 402 (414)
+++|+
T Consensus 312 ~~~l~ 316 (317)
T 1hnj_A 312 SALVR 316 (317)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99987
No 42
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.96 E-value=4.7e-28 Score=237.79 Aligned_cols=269 Identities=16% Similarity=0.078 Sum_probs=203.6
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHH
Q 015003 26 GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKA 105 (414)
Q Consensus 26 ~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~a 105 (414)
.+|+-..++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++.+|+|++.|
T Consensus 57 ~~R~~~~~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~a 136 (345)
T 3s21_A 57 HARRLWDQDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFING 136 (345)
T ss_dssp SEEEECSSCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHH
T ss_pred eeEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHH
Confidence 33333446789999999999999999999999999999999888777788999999999997679999999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHH
Q 015003 106 VMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185 (414)
Q Consensus 106 l~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~ 185 (414)
|..|..+|++|.+++|||+|+|.++. .......+
T Consensus 137 l~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~~~~--------------------------------------------- 170 (345)
T 3s21_A 137 MDIAARMLERGEIDYALVVDGETANL-VYEKTLER--------------------------------------------- 170 (345)
T ss_dssp HHHHHHHHHHTSCSEEEEEEEECCHH-HHHHHHHH---------------------------------------------
T ss_pred HHHHHHHHHCCCCCEEEEEEEcccch-hhcccccc---------------------------------------------
Confidence 99999999999999999999999875 21110000
Q ss_pred HHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCce
Q 015003 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGA 265 (414)
Q Consensus 186 l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGA 265 (414)
.. .+ ...++| |+.+ ..+.+ +||||
T Consensus 171 ---------------~~----~~--------~~~~~~---f~~~-------------------~~~~~-------~GdGA 194 (345)
T 3s21_A 171 ---------------MT----SP--------DVTEEE---FRNE-------------------LAALT-------LGCGA 194 (345)
T ss_dssp ---------------HT----CT--------TCCHHH---HHHH-------------------HGGGG-------BCCEE
T ss_pred ---------------cc----CC--------ccchhh---hhhh-------------------cccee-------eccce
Confidence 00 00 000000 1100 11122 79999
Q ss_pred eEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-Cc--------cc-c----------chHHHHHHHHHHcCCCCCCCcee
Q 015003 266 AALVLVSGVKALELGLQVIAKIRGFADAAQAP-EW--------FT-T----------APSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 266 aA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-~~--------~~-~----------~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+|+||.+.+... + . ..|.+....++.. .. +. . ...++++++|+++|++++|||+|
T Consensus 195 ~A~vl~~~~~~~--~--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~ 269 (345)
T 3s21_A 195 AAMVMARSELVP--D--A-PRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQF 269 (345)
T ss_dssp EEEEEEEGGGST--T--S-CEEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEE
T ss_pred eEEEEecCCCCC--C--C-cceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 999999765311 1 1 2444444333210 00 00 0 12367889999999999999999
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.+.|++.+...++.|-++.+++|+.
T Consensus 270 v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 270 VIHQVSRPHTAAFVKSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp EECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred EeCCCCHHHHHHHHHHcCcCHHHceee--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEEC
Confidence 999999999999999999999987654 5678999999999999998887666778888888889998999999873
No 43
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.95 E-value=1.8e-27 Score=235.22 Aligned_cols=258 Identities=16% Similarity=0.081 Sum_probs=200.3
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+-..++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++.+|+|+
T Consensus 66 tGI~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~ 145 (365)
T 3gwa_A 66 TGIRERRIAAPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGY 145 (365)
T ss_dssp HCCCEEEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHH
T ss_pred cCccEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHH
Confidence 34444444456789999999999999999999999999999999988777788999999999998679999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|..+|++|.+++|||+++|.++. ....
T Consensus 146 ~~Al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~---------------------------------------------- 178 (365)
T 3gwa_A 146 VYGLSLAKGLVETGAARCVLLLTADTYSK-YLHP---------------------------------------------- 178 (365)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGG-GSCT----------------------------------------------
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEEchhhc-cCCc----------------------------------------------
Confidence 99999999999999999999999999886 1100
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+ .. ..+..+|
T Consensus 179 ----------------------------------------------~---------------------dr---~~~~lfG 188 (365)
T 3gwa_A 179 ----------------------------------------------L---------------------DK---SVRTLFG 188 (365)
T ss_dssp ----------------------------------------------T---------------------CH---HHHTTBC
T ss_pred ----------------------------------------------c---------------------cc---ccccccc
Confidence 0 00 0122389
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEE-EEEee----------cCCC-------------------ccc-----------
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRG-FADAA----------QAPE-------------------WFT----------- 301 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g-~~~~~----------~~~~-------------------~~~----------- 301 (414)
|||+|+||+..+... . ..+....+ .+... ..+. .+.
T Consensus 189 DGAaA~vl~~~~~~~-~--~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~ 265 (365)
T 3gwa_A 189 DGASATAVIAEHGEL-E--RIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSL 265 (365)
T ss_dssp CEEEEEEEEEECSSS-C--SEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHH
T ss_pred ceeEEEEEEecCCCC-C--ceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHH
Confidence 999999998754210 0 11111111 00000 0000 000
Q ss_pred cchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC
Q 015003 302 TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (414)
Q Consensus 302 ~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~ 381 (414)
....++++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+.++|-.+.+.+++++-+.+.
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~--l~~~GNtssAsipl~L~~~~~~g~~~~ 343 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVL--MEHCGNTVSSTLPLALETMRANGTLAR 343 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCC--CTTTCBCGGGHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHH--HhcccchHHHHHHHHHHHHHHcCCCCC
Confidence 011367899999999999999999999999999999999999999987754 567899999998888888877666667
Q ss_pred CCeeEEeecccccceeeEEEE
Q 015003 382 GKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 382 ~~~~l~~~~~~gg~~~a~vl~ 402 (414)
|++.+...++.|-++.+++|+
T Consensus 344 Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 344 GMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp TCEEEEEEEETTTEEEEEEEE
T ss_pred CCEEEEEEEehhheeEEEEEE
Confidence 888888889999899999987
No 44
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.95 E-value=1.1e-27 Score=234.63 Aligned_cols=250 Identities=18% Similarity=0.088 Sum_probs=198.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHH
Q 015003 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (414)
Q Consensus 32 ~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~ 111 (414)
.++.+..+|+.+|+++||+++|+++++||.+++|+.++++..++.+..++..||+++ +++++++++|+|++.||..|+.
T Consensus 55 ~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 55 EPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADN-AGGFDLSAACAGFCHALSIAAD 133 (339)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCC-ccEEEccccchHHHHHHHHHHH
Confidence 346799999999999999999999999999999998887767788999999999974 8999999999999999999999
Q ss_pred HHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHH
Q 015003 112 SIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191 (414)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~ 191 (414)
+|++|.+++|||+|+|.++.. .
T Consensus 134 ~i~~G~~~~vLv~g~e~~s~~-~--------------------------------------------------------- 155 (339)
T 1mzj_A 134 AVESGGSRHVLVVATERMTDV-I--------------------------------------------------------- 155 (339)
T ss_dssp HHHHSSCSCEEEEEEEEGGGG-S---------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEEcccccc-c---------------------------------------------------------
Confidence 999999999999999997631 0
Q ss_pred HhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEe
Q 015003 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLV 271 (414)
Q Consensus 192 ~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~ 271 (414)
. + .++ .++.+ ++|||+|+||+
T Consensus 156 ---------------~----~-------------~d~--------------------~~~~~-------~GdGA~A~vL~ 176 (339)
T 1mzj_A 156 ---------------D----L-------------ADR--------------------SLSFL-------FGDGAGAAVVG 176 (339)
T ss_dssp ---------------C----S-------------SCT--------------------TTTTT-------BCEEEEEEEEE
T ss_pred ---------------C----c-------------ccc--------------------ccceE-------eccCceEEEEE
Confidence 0 0 000 12233 89999999998
Q ss_pred CHHHHHHcCCcceEE-EEEEEEeecC-------CCc-------------cc--------cchHHHHHHHHHHcCCCCCCC
Q 015003 272 SGVKALELGLQVIAK-IRGFADAAQA-------PEW-------------FT--------TAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 272 s~~~a~~~~~~~~~~-i~g~~~~~~~-------~~~-------------~~--------~~~~~a~~~al~~aGl~~~DI 322 (414)
+.+. .+++.. +.+.+...+. |.. .+ ....++++++|+++|++++||
T Consensus 177 ~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~di 251 (339)
T 1mzj_A 177 PSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDL 251 (339)
T ss_dssp EESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGC
T ss_pred ecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 7542 122221 1121111000 000 00 234578999999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
|+|++|+.++.....+.+.||++++ ++..+ +..+||+.++++...+.+++++-+.+.+++.+...++.|.++.+++|
T Consensus 252 d~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l 329 (339)
T 1mzj_A 252 VAFVPHQANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQAL 329 (339)
T ss_dssp SEEEECCSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEE
Confidence 9999999999988889999999988 76533 56799999999999988888776667788999999999999999999
Q ss_pred EEecc
Q 015003 402 ELMQA 406 (414)
Q Consensus 402 ~~~~~ 406 (414)
+..+.
T Consensus 330 ~~~~~ 334 (339)
T 1mzj_A 330 LLPDP 334 (339)
T ss_dssp ECCCC
T ss_pred EeCCC
Confidence 87543
No 45
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.95 E-value=3.1e-27 Score=232.39 Aligned_cols=257 Identities=18% Similarity=0.154 Sum_probs=200.9
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+-..++++..+|+.+|+++||+++|++|+|||.||++++++++..|..+..|+..||++ +.++|+++++|+++
T Consensus 48 tGI~~R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~ 126 (350)
T 4ewp_A 48 TGIVTRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGY 126 (350)
T ss_dssp HCCSEEECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHH
T ss_pred cCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhH
Confidence 55555555567889999999999999999999999999999999999888899999999999997 47899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
++||..|..+|++|.++.|||+++|.+|..
T Consensus 127 ~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-------------------------------------------------- 156 (350)
T 4ewp_A 127 CYGVAQADALVRSGTARHVLVVGVERLSDV-------------------------------------------------- 156 (350)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGGGG--------------------------------------------------
T ss_pred HHHHHHhhhhhhCCCccceeEeeeeeceec--------------------------------------------------
Confidence 999999999999999999999999998751
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+++.. +. .+..++
T Consensus 157 -------------------------------------------~d~~~------------------~~------~~~lfg 169 (350)
T 4ewp_A 157 -------------------------------------------VDPTD------------------RS------ISFLLG 169 (350)
T ss_dssp -------------------------------------------CCTTC------------------TT------TGGGBC
T ss_pred -------------------------------------------ccccc------------------cc------cccccc
Confidence 00000 00 112279
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEEE-EEeec----------------------CCC-----------ccc-------
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRGF-ADAAQ----------------------APE-----------WFT------- 301 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g~-~~~~~----------------------~~~-----------~~~------- 301 (414)
|||+|+||...+. .+... ...+. +.... +.. .+.
T Consensus 170 DGA~A~vl~~~~~---~~~~~--~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 244 (350)
T 4ewp_A 170 DGAGAVIVAASDE---PGISP--SVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVF 244 (350)
T ss_dssp EEEEEEEEEEESS---CCBCC--CEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHH
T ss_pred cchheeeeecccC---CCccc--eeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHH
Confidence 9999999986432 11111 11110 00000 000 000
Q ss_pred ----cchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 302 ----TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 302 ----~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
....++++++|+++|++++|||+|.+|+.+......+.+.||++++++... ....+||+..+|-.+.+.+++++-
T Consensus 245 ~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~-~l~~~GNtssasi~~~L~~~~~~g 323 (350)
T 4ewp_A 245 RWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVAR-DIADAGNTSAASIPLAMHRLLEEN 323 (350)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECC-THHHHCBCGGGHHHHHHHHHHHHC
T ss_pred HHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEec-ccccccchHHHHHHHHHHHHHHhC
Confidence 012468899999999999999999999999999999999999999875432 245689999999999999988887
Q ss_pred HhcCCCeeEEeecccccceeeEEEEE
Q 015003 378 RHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 378 ~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+.+.|++.+...+|.|-++.++||+.
T Consensus 324 ~~~~Gd~vll~~fG~G~t~~~~vlr~ 349 (350)
T 4ewp_A 324 PELSGGLALQIGFGAGLVYGAQVVRL 349 (350)
T ss_dssp GGGTTSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCcCEEEEEEEchhhEeEEEEEEe
Confidence 77888998888888888899999975
No 46
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.95 E-value=2.4e-27 Score=233.67 Aligned_cols=257 Identities=16% Similarity=0.103 Sum_probs=200.8
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHH
Q 015003 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (414)
Q Consensus 24 ~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~ 103 (414)
++.+++...++++..+|+.+|+++||+++|+++++||.+++++++++...|..+..++..||++ ++++++++.+|++++
T Consensus 61 Gi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~ 139 (359)
T 3h78_A 61 GVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASGLL 139 (359)
T ss_dssp CCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGHHH
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHHHH
Confidence 4444444455789999999999999999999999999999999988777788999999999997 689999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCH
Q 015003 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (414)
Q Consensus 104 ~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~ 183 (414)
.||..|..+|++|.+++|||+++|.++.. ..+
T Consensus 140 ~Al~~A~~~i~sG~~~~vLvvg~e~~S~~-~~~----------------------------------------------- 171 (359)
T 3h78_A 140 YGLQMARGQILAGLARHVLVVCGEVLSKR-MDC----------------------------------------------- 171 (359)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEEECGGG-CCC-----------------------------------------------
T ss_pred HHHHHHHHHHHCCCcCEEEEEEEchhccc-CCc-----------------------------------------------
Confidence 99999999999999999999999998761 000
Q ss_pred HHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccC
Q 015003 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (414)
Q Consensus 184 ~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (414)
++ . .. ..+..+||
T Consensus 172 ---------------------------------------------~d------------------~-~~---~t~~lfGD 184 (359)
T 3h78_A 172 ---------------------------------------------SD------------------R-GR---NLSILLGD 184 (359)
T ss_dssp ---------------------------------------------ST------------------T-TH---HHHTTBCE
T ss_pred ---------------------------------------------cc------------------c-cc---cccceecc
Confidence 00 0 00 01233899
Q ss_pred ceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--------C-----C-c-------------cc-c----------chH
Q 015003 264 GAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P-----E-W-------------FT-T----------APS 305 (414)
Q Consensus 264 GAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--------~-----~-~-------------~~-~----------~~~ 305 (414)
||+|+||+..+. .+. .|.+....++. + . . +. . ...
T Consensus 185 GAaA~vl~~~~~---~~~----~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~ 257 (359)
T 3h78_A 185 GAGAVVVSAGES---LED----GLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLV 257 (359)
T ss_dssp EEEEEEEECCSC---SSS----EEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHH
T ss_pred eeEEEEEEecCC---CCC----ceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHH
Confidence 999999997531 011 12222111110 0 0 0 00 0 113
Q ss_pred HHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCee
Q 015003 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (414)
Q Consensus 306 ~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~ 385 (414)
++++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++ .+.|++.
T Consensus 258 ~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~v 333 (359)
T 3h78_A 258 RIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVT--VDRLGNMASASTPVTLAMFWPD--IQPGQRV 333 (359)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGG--SCTTCEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCcCHHHhhhh--hhcccchHHHHHHHHHHHHHHh--CCCCCEE
Confidence 68899999999999999999999999999999999999999988765 6678999999999988888877 5678888
Q ss_pred EEeecccccceeeEEEEEecce
Q 015003 386 VGGICNGGGGASALVLELMQAV 407 (414)
Q Consensus 386 l~~~~~~gg~~~a~vl~~~~~~ 407 (414)
+...++.|-++.+++|+..+.|
T Consensus 334 ll~~fG~G~t~~~~ll~~~~~~ 355 (359)
T 3h78_A 334 LVLTYGSGATWGAALYRKPEEV 355 (359)
T ss_dssp EEEEEETTTEEEEEEEECC---
T ss_pred EEEEEchhhhheeeeEEehhhh
Confidence 8888898889999999986654
No 47
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.6e-27 Score=232.65 Aligned_cols=246 Identities=19% Similarity=0.168 Sum_probs=196.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
.+..+|+.+|+++||+++|+ ++||.+++++.++++..+..+..++..||+++ +++++++++|+|++.||..|..+|+
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~i~ 127 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVG-ALAFDLSAAATGFVYGLASVGSLIS 127 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTT-SEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCC-CcEEEEcCcChHHHHHHHHHHHHHH
Confidence 68999999999999999999 89999999988876656778899999999974 8999999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++.. ...
T Consensus 128 ~g~~~~vLv~g~e~~s~~--~~~--------------------------------------------------------- 148 (331)
T 2x3e_A 128 AGLADSALLVGVDTFSHT--LDP--------------------------------------------------------- 148 (331)
T ss_dssp TTSCSEEEEEEEECGGGG--SCT---------------------------------------------------------
T ss_pred cCCCCEEEEEEeeccccC--CCc---------------------------------------------------------
Confidence 999999999999987631 000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
. ++ ..+.+ ++|||+|+||++.+
T Consensus 149 ------------~-------------------d~--------------------~~~~~-------~GdGA~A~vL~~~~ 170 (331)
T 2x3e_A 149 ------------A-------------------DR--------------------STRAL-------FGDGAGAVVLRAGD 170 (331)
T ss_dssp ------------T-------------------CH--------------------HHHHH-------BCCEEEEEEEEEEC
T ss_pred ------------c-------------------cc--------------------cccee-------eccccEEEEEEecC
Confidence 0 00 01122 79999999998765
Q ss_pred HHHHcCCcceEEEEEEEEeecCC--Cc----------------------cc--------cchHHHHHHHHHHcCCCCCCC
Q 015003 275 KALELGLQVIAKIRGFADAAQAP--EW----------------------FT--------TAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~~--~~----------------------~~--------~~~~~a~~~al~~aGl~~~DI 322 (414)
.+ .+.+++ +....++.. +. .+ ....++++++|+++|++++||
T Consensus 171 ~a--~~~~i~----~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~di 244 (331)
T 2x3e_A 171 AE--EEGALL----AFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDL 244 (331)
T ss_dssp TT--STTBEE----EEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred CC--CCCceE----EEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 32 122222 222211110 00 00 123578999999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
|+|.+|+.++.....+.+.||++++++..+ +..+||+.+++....+.+++++-+.+++++.+...++.|.++.+++|+
T Consensus 245 d~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~ 322 (331)
T 2x3e_A 245 HHLVPHQANTRILAAVADQLDLPVERVVSN--IAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALR 322 (331)
T ss_dssp SEEEECCCCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred CEEEEcCCCHHHHHHHHHHcCCCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEE
Confidence 999999999999889999999998887654 567999999999999988887766677889999999999999999999
Q ss_pred Eeccee
Q 015003 403 LMQAVR 408 (414)
Q Consensus 403 ~~~~~~ 408 (414)
..+.|+
T Consensus 323 ~~~~~~ 328 (331)
T 2x3e_A 323 WPKIVP 328 (331)
T ss_dssp CCCCCC
T ss_pred ECCccc
Confidence 876654
No 48
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.95 E-value=1.7e-26 Score=252.73 Aligned_cols=264 Identities=20% Similarity=0.209 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-------------------CCCcHHHHHHHHCCCCCCcceee
Q 015003 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVCTT 94 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~-------------------~~~~~a~~va~~lgl~~~~~~~~ 94 (414)
..|+.+++++||+|||+++++|| .+++|+...++ .....+..|+..+|++ +|+++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC--CCeee
Confidence 34999999999999999999999 78888765543 1234678999999995 79999
Q ss_pred EccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHH
Q 015003 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (414)
Q Consensus 95 v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (414)
|+++|+|++.||++|+++|++|++|++||+|+|.++. |..... |.
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~-p~~~~~-----------------------------~~----- 203 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLK-PNTSVQ-----------------------------FL----- 203 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCC-HHHHHH-----------------------------HH-----
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------HH-----
Confidence 9999999999999999999999999999999999887 422210 00
Q ss_pred HHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccc
Q 015003 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 175 ~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (414)
+.+.++ ++..|+| |+.+ .+|++
T Consensus 204 ---------------------------~~~~ls--------~~g~~~~---Fd~~-------------------adG~~- 225 (965)
T 3hhd_A 204 ---------------------------RLGMLS--------PEGTCKA---FDTA-------------------GNGYC- 225 (965)
T ss_dssp ---------------------------HHTCBC--------TTCCCCT---TBTT-------------------CCSBC-
T ss_pred ---------------------------hccCcC--------CCCcccc---chhc-------------------cCCcc-
Confidence 000111 2456777 6665 66777
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc------ccchHHHHHHHHHHcCCCCCCCceeecc
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------TTAPSLAIPKAIANAGLEASQIDYYEIN 328 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~------~~~~~~a~~~al~~aGl~~~DId~~~~h 328 (414)
++||++++||++.+.|+ ++++.|+|++...+..... ..+..++++++|+++|++++|||+||.|
T Consensus 226 ------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaH 295 (965)
T 3hhd_A 226 ------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAH 295 (965)
T ss_dssp ------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred ------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhcccccc
Confidence 69999999999987764 5789999999988764321 1245789999999999999999999999
Q ss_pred ccchhH----HHH-HHHHcCCC-CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------------
Q 015003 329 EAFSVV----AIA-NQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------------- 380 (414)
Q Consensus 329 d~~~~~----~~~-~~e~lGl~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------------- 380 (414)
.+++.. +.. +.+.++-. ..++.+.+.|..+||+.+|+|+..+++++++|+.+
T Consensus 296 gTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 375 (965)
T 3hhd_A 296 GTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGR 375 (965)
T ss_dssp CCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCc
Confidence 999842 332 34456532 34678888899999999999999999999999875
Q ss_pred ----------CCCeeEEeecccccceeeEEEEEecc
Q 015003 381 ----------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 381 ----------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
..++..+.+++.||+|+.+|||....
T Consensus 376 ~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~~ 411 (965)
T 3hhd_A 376 LQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNTQ 411 (965)
T ss_dssp EEECCSCEECCSCEEEEEEECTTSEEEEEEEEECCC
T ss_pred eeecCCCccCCCCeEEEecccCCCceEEEEeccCCc
Confidence 01234678899999999999997643
No 49
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.95 E-value=1.1e-27 Score=238.35 Aligned_cols=252 Identities=15% Similarity=0.080 Sum_probs=195.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQS 112 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~ 112 (414)
+.+..+|+.+|+++||+++|+++++||.+++++..+ +..+..+..++..||++..++++++ +++|+|++.||..|..+
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~ 159 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDF 159 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHH
Confidence 346689999999999999999999999999998877 5567889999999999755799999 89999999999999999
Q ss_pred HHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHH
Q 015003 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (414)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~ 192 (414)
|++|.+++|||+|+|.++.. +..
T Consensus 160 i~~g~~~~vLv~g~e~~s~~-~~~-------------------------------------------------------- 182 (382)
T 1u0m_A 160 CTAYPEANALIVACEFCSLC-YQP-------------------------------------------------------- 182 (382)
T ss_dssp HHHSTTCEEEEEEEEEGGGG-CCT--------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchh-cCc--------------------------------------------------------
Confidence 99999999999999997641 000
Q ss_pred hHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeC
Q 015003 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (414)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s 272 (414)
++++ .+.. ..+.+ ++|||+|+||++
T Consensus 183 ---------------------------------~d~~-------~~~~--------~~~~l-------fGDGA~A~vL~~ 207 (382)
T 1u0m_A 183 ---------------------------------TDLG-------VGSL--------LCNGL-------FGDGIAAAVVRG 207 (382)
T ss_dssp ---------------------------------TCCS-------HHHH--------HHHHH-------BCEEEEEEEEET
T ss_pred ---------------------------------ccCC-------HHHh--------hccch-------hcCCcEEEEEec
Confidence 0000 0000 00122 799999999987
Q ss_pred HHHHHHcCCcceEEEEEEEEee--cCC------------------Ccc---ccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 273 GVKALELGLQVIAKIRGFADAA--QAP------------------EWF---TTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~--~~~------------------~~~---~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
.+. .+ .+|.+..... +.. ..+ ..... +++++|+++|++++|||+|.+|+
T Consensus 208 ~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~ 279 (382)
T 1u0m_A 208 RGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHA 279 (382)
T ss_dssp TTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEEC
T ss_pred cCC---CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECC
Confidence 542 11 3455544321 110 000 11234 89999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEecc
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
.++.....+.+.||+++++++++ ..+..+||+.+++....+.+++++-+.+.|++.+...++.|.++.+++|+..++
T Consensus 280 ~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~vl~~~~~ 357 (382)
T 1u0m_A 280 GGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCWQTA 357 (382)
T ss_dssp SHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEEEEETTTEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEEEEcccceeEEEEEEEeec
Confidence 99999999999999999887642 235679999999999999998887666678888888888888999999988643
No 50
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.94 E-value=1.9e-27 Score=237.52 Aligned_cols=255 Identities=15% Similarity=0.132 Sum_probs=196.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...+..+..++..||++..++.+++ +++|+|++.||..|..+|
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i 189 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV 189 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999998887 5567889999999999755678898 899999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++.. +.+ +.+++
T Consensus 190 ~~G~~~~vLv~g~e~~s~~-~~~-------------------------------------------~~~r~--------- 216 (393)
T 1ted_A 190 RAHPAMKALVVCIELCSVN-AVF-------------------------------------------ADDIN--------- 216 (393)
T ss_dssp HHSTTCEEEEEEEEECGGG-CCC-------------------------------------------CSSHH---------
T ss_pred HcCCCCEEEEEEEEecccc-CCC-------------------------------------------CCCHH---------
Confidence 9999999999999998751 000 00000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
+...+..+||||+|+||++.
T Consensus 217 ------------------------------------------------------------~~~~~~lfGDGA~A~vL~~~ 236 (393)
T 1ted_A 217 ------------------------------------------------------------DVVIHSLFGDGCAALVIGAS 236 (393)
T ss_dssp ------------------------------------------------------------HHHHHHHBCEEEEEEEEEEE
T ss_pred ------------------------------------------------------------HhhhhhhhcCccEEEEEecC
Confidence 00011227999999999876
Q ss_pred HHHHHcCCcceEEEEEEEEe--ecCCCc-------------cc--------cchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 274 VKALELGLQVIAKIRGFADA--AQAPEW-------------FT--------TAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~--~~~~~~-------------~~--------~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
+.+...+. .+.+|.+++.. .+.... .+ ....++++++|+++|++++|||+|.+|+.
T Consensus 237 ~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~ 315 (393)
T 1ted_A 237 QVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPG 315 (393)
T ss_dssp CTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCS
T ss_pred CCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCC
Confidence 53211122 34577777544 221110 01 12346889999999999999999999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHh-cCCCeeEEeecccccceeeEEEEEe
Q 015003 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRH-KKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~-~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+......+.+.||++++++..+ -.+..+||+.+++....+.+++++-+. +.+++.+...+++|.++.+++|+..
T Consensus 316 ~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 316 GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheeec
Confidence 9999999999999999887532 124568999999988888888776554 3678888888888889999999864
No 51
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.94 E-value=5.1e-27 Score=232.86 Aligned_cols=250 Identities=14% Similarity=0.067 Sum_probs=191.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ +..+..+..++..||+++.++++++. ++|+|++.||..|..+|
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999998876 45678899999999997557999996 89999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++...... .+++
T Consensus 172 ~~g~~~~vLv~g~e~~s~~~~~~--------------------------------------------~dr~--------- 198 (374)
T 2h84_A 172 KASPRNRILVVCTEVCSLHFSNT--------------------------------------------DGGD--------- 198 (374)
T ss_dssp TTCTTCEEEEEEEECCGGGCCCS--------------------------------------------SSHH---------
T ss_pred HcCCCCEEEEEEEEecchhhcCC--------------------------------------------CCHH---------
Confidence 99999999999999987410000 0000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
+..++..++|||+|+||++.
T Consensus 199 ------------------------------------------------------------~~~~~~lfGDGA~A~vL~~~ 218 (374)
T 2h84_A 199 ------------------------------------------------------------QMVASSIFADGSAAYIIGCN 218 (374)
T ss_dssp ------------------------------------------------------------HHHHHHHBCCEEEEEEEESS
T ss_pred ------------------------------------------------------------HHhhhhhhccCcEEEEEecC
Confidence 00011227999999999986
Q ss_pred HHHHHcCCcceEEEEEEEEeecC-----------CCc---------c---ccchHHHHHHHHHHcC------CCCCCCce
Q 015003 274 VKALELGLQVIAKIRGFADAAQA-----------PEW---------F---TTAPSLAIPKAIANAG------LEASQIDY 324 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~-----------~~~---------~---~~~~~~a~~~al~~aG------l~~~DId~ 324 (414)
+.+++. .+ .++.+.+..... ... + .....++++++|+++| ++++|||+
T Consensus 219 ~~~~~~--~~-~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~ 295 (374)
T 2h84_A 219 PRIEET--PL-YEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEF 295 (374)
T ss_dssp CCTTCC--CC-EEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEE
T ss_pred CCcccC--Cc-eeEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCE
Confidence 543211 12 366665543110 000 0 0123578899999999 99999999
Q ss_pred eeccccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 325 YEINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
| +|+.++.....+.+.||++++++..+ -.+..+||+..++....+.+++++-+ .|++.+...+++|.++.+++|+.
T Consensus 296 ~-~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~Gd~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 296 L-IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LPTYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp E-ECCCCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred e-ECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CCCeEEEEEeccchhhhhhhhee
Confidence 9 99999999999999999999887642 22456899999998888888876544 57788888888888889999886
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
.
T Consensus 373 ~ 373 (374)
T 2h84_A 373 V 373 (374)
T ss_dssp C
T ss_pred c
Confidence 4
No 52
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.94 E-value=1.8e-25 Score=222.44 Aligned_cols=240 Identities=16% Similarity=0.075 Sum_probs=186.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHc
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~s 115 (414)
+..+|+.+|+++||+++|+++++||.|++++++++...|..+..++..||++ +++++++.+|+++++||..|..+|++
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~dv~~aC~g~~~aL~~A~~~i~~ 193 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFDMNVACSSATFGLKTAADFVGG 193 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEEECCccHHHHHHHHHHHHHHHC
Confidence 4789999999999999999999999999999988777888999999999993 79999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHH
Q 015003 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (414)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~ 195 (414)
|.+++|||+|+|.+|..
T Consensus 194 g~~~~vLvvg~E~~S~~--------------------------------------------------------------- 210 (392)
T 3led_A 194 GSVDAVLMVNPEICSGH--------------------------------------------------------------- 210 (392)
T ss_dssp TSCSEEEEEEEEEGGGG---------------------------------------------------------------
T ss_pred CCCCEEEEEeehhcCCc---------------------------------------------------------------
Confidence 99999999999998751
Q ss_pred hHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHH
Q 015003 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (414)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~ 275 (414)
++.++ ++ .|..+||||+|+||+..+.
T Consensus 211 ------------------------------~d~~d------------------r~------t~~lFGDGA~A~vl~~~~~ 236 (392)
T 3led_A 211 ------------------------------LNFRD------------------RD------SHFIFGDVATAAIVERADD 236 (392)
T ss_dssp ------------------------------CCTTC------------------TT------TTTTBCEEEEEEEEEEGGG
T ss_pred ------------------------------CCcCc------------------cc------CCcccccccEEEEEEecCC
Confidence 00000 10 2445899999999997642
Q ss_pred HHHcCCcceEEEEEEEEeecC---------------CCc-------cc-c----------chHHHHHHHHHHcCCCCCCC
Q 015003 276 ALELGLQVIAKIRGFADAAQA---------------PEW-------FT-T----------APSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~~~---------------~~~-------~~-~----------~~~~a~~~al~~aGl~~~DI 322 (414)
. . +...|.+....++. +.. +. . ...++++++|+++|++++||
T Consensus 237 ~----~-~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dI 311 (392)
T 3led_A 237 A----Q-GGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGL 311 (392)
T ss_dssp C----C-SSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred C----C-CCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 1 0 11244444332210 000 00 0 11357899999999999999
Q ss_pred ceeeccccchhHHHHHHHHc-CC--CCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeE
Q 015003 323 DYYEINEAFSVVAIANQKLL-GL--DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~l-Gl--~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~ 399 (414)
|+|.+|+.+......+.+.| |+ +++++..+ ...+||+..+|-.+.+.++.. +.+.|++.+...+++|-++.++
T Consensus 312 d~~v~Hqan~~i~~~~~~~llgl~~~~~k~~~~--l~~~GNtssAsipl~L~~~~~--~~~~Gd~vll~gfG~G~t~~~~ 387 (392)
T 3led_A 312 KRMWLHQANINMNEIIGRKVLGRDPTRDENVII--LDDYANTSSAGSIIAFHKHQD--DMAQGDLGLICSFGAGYSAGTV 387 (392)
T ss_dssp SEEEECSSCHHHHHHHHHHHHTSCCCTTTBCCC--HHHHCBCGGGHHHHHHHHCCT--TCCTTCEEEEEEEETTTEEEEE
T ss_pred cEEEEcCCCHHHHHHHHHHhcCCCCCHHHHHHH--HhhhCccHHHHHHHHHHHHhC--CCCCCCEEEEEEEChhhEeEEE
Confidence 99999999999988889986 75 55665544 677899999998877766521 3346778888888888899999
Q ss_pred EEEE
Q 015003 400 VLEL 403 (414)
Q Consensus 400 vl~~ 403 (414)
+|+.
T Consensus 388 ll~~ 391 (392)
T 3led_A 388 FVQK 391 (392)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 53
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.94 E-value=1.4e-25 Score=218.00 Aligned_cols=249 Identities=15% Similarity=0.112 Sum_probs=189.8
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+-..++. ..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++ +++++++++|+|+
T Consensus 39 ~Gi~~R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~-~~~~~v~~aC~s~ 116 (321)
T 3il6_A 39 TGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE-AFAFDISAACSGF 116 (321)
T ss_dssp HSCSEEECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT-CEEEEECCGGGHH
T ss_pred cCceEEEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC-ceEEEeCcccHHH
Confidence 4555554333444 9999999999999999999999999999999887778889999999999985 9999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
++||..|..+|++|.+++|||+++|.+|..
T Consensus 117 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-------------------------------------------------- 146 (321)
T 3il6_A 117 VYALSMAEKLVLSGRYQTGLVIGGETFSKM-------------------------------------------------- 146 (321)
T ss_dssp HHHHHHHHHHHHTSSCCCEEEEEEECGGGG--------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEcccccc--------------------------------------------------
Confidence 999999999999999999999999998751
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
++.++ +. .+..+|
T Consensus 147 -------------------------------------------~~~~d------------------r~------~~~lfG 159 (321)
T 3il6_A 147 -------------------------------------------LDWTD------------------RS------TAVLFG 159 (321)
T ss_dssp -------------------------------------------SCTTC------------------TT------TGGGBC
T ss_pred -------------------------------------------CCccc------------------cc------cceeec
Confidence 00000 10 123489
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEEEEEeec---------------CCCc---------ccc-c------hHHHHHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRGFADAAQ---------------APEW---------FTT-A------PSLAIPKA 311 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~---------------~~~~---------~~~-~------~~~a~~~a 311 (414)
|||+|+||+..+. + . +.+....++ .+.. +.. + ..+.+.++
T Consensus 160 DGA~A~vl~~~~~----~-~----i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 230 (321)
T 3il6_A 160 DGAAGVLIEAAET----P-H----FLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQN 230 (321)
T ss_dssp CEEEEEEEEEESS----C-C----EEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHH
T ss_pred cccEEEEEEEcCC----C-C----EEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHH
Confidence 9999999997542 1 1 111111111 0000 000 0 01223333
Q ss_pred HHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC--CeeEEee
Q 015003 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG--KYGVGGI 389 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--~~~l~~~ 389 (414)
++++ +.++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.+.| ++.+...
T Consensus 231 i~~~-l~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~ 307 (321)
T 3il6_A 231 ILSL-VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN--MDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTG 307 (321)
T ss_dssp HHTT-CCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--GGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEE
T ss_pred HHHH-cCcccCCEEEEcCCCHHHHHHHHHHcCcCHHHhhhh--HhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEE
Confidence 3332 228999999999999999999999999999988764 6779999999988888888876666677 8888888
Q ss_pred cccccceeeEEEE
Q 015003 390 CNGGGGASALVLE 402 (414)
Q Consensus 390 ~~~gg~~~a~vl~ 402 (414)
++.|-++.+++|+
T Consensus 308 fG~G~t~~~~~l~ 320 (321)
T 3il6_A 308 FGGGLTWGSLLLT 320 (321)
T ss_dssp EETTTEEEEEEEE
T ss_pred EehhheeEEEEEE
Confidence 8998899999987
No 54
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.93 E-value=1.4e-25 Score=220.98 Aligned_cols=259 Identities=20% Similarity=0.156 Sum_probs=197.0
Q ss_pred ecCccccCCCCCCCC--CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecC-CCCCCcHHHHHHHHCCCCCCcceeeEcc
Q 015003 21 ARTPMGGFLGSLSSV--SATKLGSIAIECALKRANVKPLLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTINK 97 (414)
Q Consensus 21 ~~t~~~~~~~~~~~~--~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~-~~~~~~~a~~va~~lgl~~~~~~~~v~~ 97 (414)
.+|++.+++...+++ +..+|+.+|+++||+++|+++++||.|++++++. ....+.++..++..||++ +++++++++
T Consensus 36 ~~tGi~~r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~ 114 (357)
T 3s3l_A 36 KLRGIESVTVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQ 114 (357)
T ss_dssp HHHCCCEEECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEEC
T ss_pred HHcCceEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcC
Confidence 346666655444445 8999999999999999999999999999998741 122346789999999996 699999999
Q ss_pred CCchHHHHHHHHHHHHHcCCCC--eEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHH
Q 015003 98 VCSSGMKAVMLAAQSIQLGIND--IVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (414)
Q Consensus 98 aC~s~~~al~~A~~~I~sG~~~--~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (414)
+|+++++||..|..+|++|.++ +|||+++|.++. +.
T Consensus 115 aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~-~~----------------------------------------- 152 (357)
T 3s3l_A 115 RCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAG-PR----------------------------------------- 152 (357)
T ss_dssp GGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCT-TT-----------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccc-cc-----------------------------------------
Confidence 9999999999999999999999 999999999884 10
Q ss_pred HHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCcccc
Q 015003 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTA 255 (414)
Q Consensus 176 ~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (414)
++.. .. +
T Consensus 153 --------------------------------------------------~~~~-------------------~~---~- 159 (357)
T 3s3l_A 153 --------------------------------------------------IDRW-------------------NS---V- 159 (357)
T ss_dssp --------------------------------------------------CCTT-------------------TS---S-
T ss_pred --------------------------------------------------cccc-------------------cc---c-
Confidence 0000 00 0
Q ss_pred CCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-------------C------cc--c-------------
Q 015003 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-------------E------WF--T------------- 301 (414)
Q Consensus 256 ~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-------------~------~~--~------------- 301 (414)
.+..+||||+|+||+..+. + ..|.+....++.. . .. .
T Consensus 160 -~~~lfGDGA~A~vl~~~~~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 230 (357)
T 3s3l_A 160 -DVTMYGDGAAALVLSTRDG----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLP 230 (357)
T ss_dssp -SSCCBCCEEEEEEEESSCC----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCT
T ss_pred -CCcccccccEEEEEecCCC----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchh
Confidence 2344899999999987531 1 2344433322210 0 00 0
Q ss_pred -------cchHHHHHHHHHHcCCCCCCCceeec-cccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHH
Q 015003 302 -------TAPSLAIPKAIANAGLEASQIDYYEI-NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTL 373 (414)
Q Consensus 302 -------~~~~~a~~~al~~aGl~~~DId~~~~-hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~ 373 (414)
....++++++|+++|++++|||+|.+ |+.+.. ...+.+.||++++++...- ...+||+..++-.+.+.++
T Consensus 231 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~~-~~~~GNt~aAsipl~L~~~ 308 (357)
T 3s3l_A 231 DLTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWAY-GRTTGHVGAGDQYAGLAHL 308 (357)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHHH-HHHHCBCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHHh-ccccccchHhHHHHHHHHH
Confidence 01246789999999999999999996 999988 7788999999999876421 1237999999988888888
Q ss_pred HHHHHhcCCCeeEEeecccccceeeEEEEEecc
Q 015003 374 LGVLRHKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 374 ~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+++-+.+.|++.+...++.|.++.+++|+..+.
T Consensus 309 ~~~g~l~~Gd~vll~~fG~G~t~~a~ll~~~~~ 341 (357)
T 3s3l_A 309 VENALVQPGDRVLLFGGGAGYTCTAAVVEILRM 341 (357)
T ss_dssp HHTTCCCTTCEEEEECCBTTTEEEEEEEEECCC
T ss_pred HHcCCCCCCCEEEEEEEchhhhheeeeEEeccC
Confidence 876666678888888888888999999998765
No 55
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.93 E-value=1.7e-25 Score=263.74 Aligned_cols=280 Identities=18% Similarity=0.175 Sum_probs=211.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC--------eEEEEeecCCC------------------------CCCcHHHHHHH-
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ--------EVFFGNVLSAN------------------------LGQAPARQAAL- 82 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id--------~vi~g~~~~~~------------------------~~~~~a~~va~- 82 (414)
....|+.+|+++||+|||+++++|+ .+++|+..+.. .....+..++.
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 4567999999999999999999885 58888764321 01224556665
Q ss_pred HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 83 ~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
.+|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. .....-
T Consensus 2726 ~lGl~--GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~--~~~~~f----------------------- 2778 (3089)
T 3zen_D 2726 YVGGY--GAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTL--EAIIGF----------------------- 2778 (3089)
T ss_dssp TTCCC--SCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHHH-----------------------
T ss_pred HcCCC--CCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCH--HHHHHH-----------------------
Confidence 46994 799999999999999999999999999999999999999653 211100
Q ss_pred ccCCchHHHH-HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHh
Q 015003 163 YNDFGMGVCA-EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (414)
Q Consensus 163 ~~~~~~~~~a-~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (414)
..++.++ +.++.+++. .++..|+| |+.+
T Consensus 2779 ---~~~~als~~~~~~~~~~---------------------------------sp~~~crp---Fd~~------------ 2807 (3089)
T 3zen_D 2779 ---GDMAATADTEMMRAKGI---------------------------------SDSKFSRA---NDRR------------ 2807 (3089)
T ss_dssp ---HHHTCBCCHHHHHHTTC---------------------------------CTTTSCCS---SBTT------------
T ss_pred ---HHhhhhhcchhhhhccC---------------------------------CcccccCc---cccC------------
Confidence 0000000 001111111 12556777 6666
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc------------ccchHHHHH
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------------TTAPSLAIP 309 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~------------~~~~~~a~~ 309 (414)
++|++ ++|||+++||++.+.|+++|.++++.|.+.+...+..... ..+..++++
T Consensus 2808 -------~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~ 2873 (3089)
T 3zen_D 2808 -------RLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLA 2873 (3089)
T ss_dssp -------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHH
T ss_pred -------CCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHH
Confidence 67887 7999999999999999999999999888888766532210 013346899
Q ss_pred HHHHHcCCCCCCCceeeccccchhH----HH----HHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 310 KAIANAGLEASQIDYYEINEAFSVV----AI----ANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 310 ~al~~aGl~~~DId~~~~hd~~~~~----~~----~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
++|+++|++++|||+|+.|.+++.. +. .+.+.||... .+++++++|..+||+.||+|+.+++.++++|+.+
T Consensus 2874 ~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g 2953 (3089)
T 3zen_D 2874 RSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDG 2953 (3089)
T ss_dssp HHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcC
Confidence 9999999999999999999988852 22 3556788765 5799999999999999999999999999999864
Q ss_pred C----------------------------------CCeeEEeecccccceeeEEEEEecce
Q 015003 381 K----------------------------------GKYGVGGICNGGGGASALVLELMQAV 407 (414)
Q Consensus 381 ~----------------------------------~~~~l~~~~~~gg~~~a~vl~~~~~~ 407 (414)
- .++.+.++++.||+|+.+||+..+.+
T Consensus 2954 ~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2954 VIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp CBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred ccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence 0 24577888999999999999987763
No 56
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.93 E-value=1e-24 Score=218.53 Aligned_cols=253 Identities=17% Similarity=0.094 Sum_probs=193.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...+..+.+++..||+++.++ +++++++|+|++.||..|..+|
T Consensus 113 ~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 191 (406)
T 2d3m_A 113 PGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCG-VDMPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLA 191 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHH
Confidence 47799999999999999999999999999998876 456778999999999975455 8999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++.. +..
T Consensus 192 ~~g~~~~vLvvg~E~~s~~-~~~--------------------------------------------------------- 213 (406)
T 2d3m_A 192 ENNRGARVLVVCAELTIMM-LRA--------------------------------------------------------- 213 (406)
T ss_dssp HTSTTCEEEEEEEECGGGT-CCC---------------------------------------------------------
T ss_pred HcCCCCEEEEEEEEecchh-eeC---------------------------------------------------------
Confidence 9999999999999998751 000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
| .+++ .-....+..+||||+|+||++.
T Consensus 214 ------------------~-------------~d~~----------------------~~~~~~~~lfGDGAaA~vL~~~ 240 (406)
T 2d3m_A 214 ------------------P-------------NETH----------------------LDNAIGISLFGDGAAALIIGSD 240 (406)
T ss_dssp ------------------C-------------CSTT----------------------HHHHHHHTTBCCEEEEEEEESS
T ss_pred ------------------C-------------cccc----------------------hhhhhccceeccceEEEEEecC
Confidence 0 0000 0000012238999999999875
Q ss_pred HHHHHcC-CcceEEEEEEEEeecC-C-Cc-------------cc--------cchHHHHHHHHHHcCCCCCCCce----e
Q 015003 274 VKALELG-LQVIAKIRGFADAAQA-P-EW-------------FT--------TAPSLAIPKAIANAGLEASQIDY----Y 325 (414)
Q Consensus 274 ~~a~~~~-~~~~~~i~g~~~~~~~-~-~~-------------~~--------~~~~~a~~~al~~aGl~~~DId~----~ 325 (414)
+.. + ..+..++.+.+..... . .. +. ....++++++|+++|++++ ||+ |
T Consensus 241 ~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~agl~~~-id~~di~~ 316 (406)
T 2d3m_A 241 PII---GVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPP-EDWNSLFW 316 (406)
T ss_dssp CCT---TTCCCCEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHTTTCCCC-SSGGGSEE
T ss_pred CCC---ccCCCceEEEecccEEcCCCchhcceeeccCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCC-CCccceEE
Confidence 421 1 1112455555532110 0 00 00 1234788999999999998 999 9
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccce
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGA 396 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~ 396 (414)
.+|+.+......+.+.||++++++..+ -.+..+||+.++|..+.+.++..+-+ +.| ++.+...++.|.++
T Consensus 317 v~Hq~~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~ 395 (406)
T 2d3m_A 317 IPHPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSA-AKGLETYGEGLEWGVLLGFGPGITV 395 (406)
T ss_dssp EECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEE
T ss_pred EECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHhcc-ccCCCccCCCcceEEEEEeccchhh
Confidence 999999999999999999999887653 22456899999999999999988766 555 78888888888899
Q ss_pred eeEEEEEe
Q 015003 397 SALVLELM 404 (414)
Q Consensus 397 ~a~vl~~~ 404 (414)
.+++|+..
T Consensus 396 ~~~ll~~~ 403 (406)
T 2d3m_A 396 ETILLHSL 403 (406)
T ss_dssp EEEEEEEC
T ss_pred hhHHhhhc
Confidence 99999875
No 57
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.93 E-value=4.1e-25 Score=220.20 Aligned_cols=255 Identities=15% Similarity=0.126 Sum_probs=189.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|+++++||.|+++++++ +..|..+..++..||+++..+ +++++.+|+++++||..|..+|+
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~ 179 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999988 667889999999999985443 89999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++..-.
T Consensus 180 sg~~~~vLvvg~E~~s~~~~------------------------------------------------------------ 199 (393)
T 3ov2_A 180 NNRGARVLVVACEITVLSFR------------------------------------------------------------ 199 (393)
T ss_dssp HSTTCEEEEEEEECGGGTCC------------------------------------------------------------
T ss_pred cCCCCEEEEEEEeccchhcc------------------------------------------------------------
Confidence 99999999999999873100
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
++++ + .+-.+..+.++||||+|+||+..+
T Consensus 200 --------------------------------~~~d------------------~-~~~~~~~~~lFGDGAaA~vl~~~~ 228 (393)
T 3ov2_A 200 --------------------------------GPNE------------------G-DFEALAGQAGFGDGAGAVVVGADP 228 (393)
T ss_dssp --------------------------------CCCT------------------T-CHHHHHHHHHBCCEEEEEEEESSC
T ss_pred --------------------------------CCcc------------------c-chhhhcccccccCccEEEEEEecC
Confidence 0000 0 000001223389999999999754
Q ss_pred HHHHcCCcceEEEEEEEEeec-CC-------------------Ccc---ccchHHHHHHHHHHcCCCC-CCCceeecccc
Q 015003 275 KALELGLQVIAKIRGFADAAQ-AP-------------------EWF---TTAPSLAIPKAIANAGLEA-SQIDYYEINEA 330 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~-~~-------------------~~~---~~~~~~a~~~al~~aGl~~-~DId~~~~hd~ 330 (414)
.. .. ..+...+...+.... .. ..+ .....++++++|+++|++. +|| ++.+|+.
T Consensus 229 ~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~ 305 (393)
T 3ov2_A 229 LE-GI-EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPG 305 (393)
T ss_dssp CT-TT-CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCC
T ss_pred CC-cc-cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCC
Confidence 21 11 112223333222111 00 000 0112468999999999997 888 8999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHH-H---hcCC---CeeEEeecccccceeeEEEE
Q 015003 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVL-R---HKKG---KYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql-~---~~~~---~~~l~~~~~~gg~~~a~vl~ 402 (414)
+......+.+.||++++++..+ --...+||+..+|-...+.++.++. + .+.| ++.+...+|.|-++.+++|+
T Consensus 306 n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~ 385 (393)
T 3ov2_A 306 NWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLR 385 (393)
T ss_dssp CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEE
T ss_pred ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeE
Confidence 9999999999999999987542 1134589999999988888887651 1 1234 77888888888899999999
Q ss_pred Eec
Q 015003 403 LMQ 405 (414)
Q Consensus 403 ~~~ 405 (414)
..+
T Consensus 386 ~~~ 388 (393)
T 3ov2_A 386 SMP 388 (393)
T ss_dssp ECB
T ss_pred Ecc
Confidence 764
No 58
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.93 E-value=3.1e-25 Score=220.67 Aligned_cols=251 Identities=16% Similarity=0.084 Sum_probs=182.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++..+ +++++.+|++++.||..|..+|+
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~ 173 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999999999888 667889999999999985443 89999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++.. +..
T Consensus 174 sg~~~~vLvvg~E~~s~~-~~~---------------------------------------------------------- 194 (387)
T 3oit_A 174 NSRGARVLVVAAELTLMY-FTG---------------------------------------------------------- 194 (387)
T ss_dssp SSTTCEEEEEEEECGGGT-CCC----------------------------------------------------------
T ss_pred cCCCCEEEEEEEeccchh-ccC----------------------------------------------------------
Confidence 999999999999998731 000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
| - | + .+-.+..+.++||||+|+||+..+
T Consensus 195 -----------------~-------------~--d-------------------~-~~~~~~~~~lFGDGAaA~vl~~~~ 222 (387)
T 3oit_A 195 -----------------P-------------D--E-------------------G-CFRTLLVQGLFGDGAAAVIVGADA 222 (387)
T ss_dssp -----------------C-------------C--S-------------------S-SCHHHHHHHHBCCEEEEEEEESSC
T ss_pred -----------------c-------------c--c-------------------c-chHhhhcccccccceEEEEEecCC
Confidence 0 0 0 0 000011233489999999999754
Q ss_pred HHHHcCCcceEEEEEEEEeec-CC-C---------c----cc--------cchHHHHHHHHHHc----CCCCCCCc--ee
Q 015003 275 KALELGLQVIAKIRGFADAAQ-AP-E---------W----FT--------TAPSLAIPKAIANA----GLEASQID--YY 325 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~-~~-~---------~----~~--------~~~~~a~~~al~~a----Gl~~~DId--~~ 325 (414)
. . ...+...+.+.+.... .. . . +. ....++++++|+++ |++ |+| +|
T Consensus 223 ~--~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~ 297 (387)
T 3oit_A 223 D--D-VERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFW 297 (387)
T ss_dssp C--S-SCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEE
T ss_pred C--c-ccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEE
Confidence 1 1 1122345555443221 00 0 0 00 01135777888888 887 555 99
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC------CeeEEeecccccceee
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG------KYGVGGICNGGGGASA 398 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~------~~~l~~~~~~gg~~~a 398 (414)
.+|+.+......+.+.||++++++..+ --...+||+..+|-...+.++.++ +.+.| ++.+...+|.|-++.+
T Consensus 298 v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~fG~G~t~~~ 376 (387)
T 3oit_A 298 AVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMAFGPGMTVDA 376 (387)
T ss_dssp EECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEEEETTTEEEE
T ss_pred EECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEEecccceeee
Confidence 999999999999999999999987542 113458999999988888887655 33333 6788888888889999
Q ss_pred EEEEEe
Q 015003 399 LVLELM 404 (414)
Q Consensus 399 ~vl~~~ 404 (414)
++|+..
T Consensus 377 ~ll~~~ 382 (387)
T 3oit_A 377 MLLHAT 382 (387)
T ss_dssp EEEEEC
T ss_pred eeeEec
Confidence 999975
No 59
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.92 E-value=1.6e-24 Score=216.39 Aligned_cols=257 Identities=14% Similarity=0.058 Sum_probs=194.4
Q ss_pred ecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCC
Q 015003 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVC 99 (414)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC 99 (414)
.+|++.+++.... .+..+|+.+|+++||+++|+++++||.++++++++ ...|..+.+++..||+++.++.+++ +.+|
T Consensus 122 ~rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~~~P~~a~~v~~~LGl~~~~~~~~v~~~~C 199 (413)
T 3v7i_A 122 ASQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTT-PALPGLDVALANRLPLRGDTMLLPATQWAC 199 (413)
T ss_dssp CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSS-CCSSCHHHHHHHHTTCCTTCEEEEESSCGG
T ss_pred cCCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCC-CCcCHHHHHHHHHhCCCCCceEEEeeCCcc
Confidence 3567766643323 47889999999999999999999999999999887 4678899999999999866888999 9999
Q ss_pred chHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHc
Q 015003 100 SSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKH 179 (414)
Q Consensus 100 ~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 179 (414)
+++++||..|..+|++|.+++|||+|+|.+|.. +
T Consensus 200 agg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~-~--------------------------------------------- 233 (413)
T 3v7i_A 200 VAGTRSLALAADLVAADPDRVVLVVISEALSTT-Y--------------------------------------------- 233 (413)
T ss_dssp GHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG-C---------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc-c---------------------------------------------
Confidence 999999999999999999999999999999861 0
Q ss_pred CCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCC
Q 015003 180 TITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNAS 259 (414)
Q Consensus 180 g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 259 (414)
+.++ ++ .-.+..+.
T Consensus 234 -----------------------------------------------~~~d------------------~~-~~~lv~~~ 247 (413)
T 3v7i_A 234 -----------------------------------------------QPAD------------------DT-LESLIVRL 247 (413)
T ss_dssp -----------------------------------------------CSSC------------------CS-TTHHHHHH
T ss_pred -----------------------------------------------Cccc------------------cc-hhhhhcce
Confidence 0000 00 00011133
Q ss_pred cccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeec-CC-Cc-----------cc---------cchHHHHHHHHH----
Q 015003 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ-AP-EW-----------FT---------TAPSLAIPKAIA---- 313 (414)
Q Consensus 260 ~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~-~~-~~-----------~~---------~~~~~a~~~al~---- 313 (414)
.+||||+|+||++.+.. .+...+.+...... +. .. +. ....++++++|+
T Consensus 248 LFGDGAaAvvl~~~~~~-----~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~ 322 (413)
T 3v7i_A 248 LFADTAVAAVVTGRPRP-----ESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYE 322 (413)
T ss_dssp HBCCEEEEEEEESSCCT-----TEEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTS
T ss_pred eeccccEEEEEEecCCC-----CCCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccc
Confidence 48999999999975420 11123444332211 00 00 00 012467889999
Q ss_pred --HcCCCCCCCceeeccccchhHHHHHHHHcC--CCCCCc---CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 314 --NAGLEASQIDYYEINEAFSVVAIANQKLLG--LDPEQV---NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 314 --~aGl~~~DId~~~~hd~~~~~~~~~~e~lG--l~~~~v---n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
++|++ ||+|.+|+.+......+.+.|| ++++++ ..+ +. +||+..+|-...+.++. +-+.+.|++.+
T Consensus 323 ~~~~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~--l~-~GNtssAsi~~~L~~~~-~~~~~~Gd~vl 395 (413)
T 3v7i_A 323 DDPSSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDS--YT-SGNRGGAAVFDILRRAH-DAGQKTGSRAV 395 (413)
T ss_dssp SSCTTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHH--HT-TCBCGGGHHHHHHHHHH-HHCCCTTCEEE
T ss_pred cccCCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceE--ec-eeChHHHHHHHHHHHHH-hCCCCCCCEEE
Confidence 89997 9999999999999999999999 999987 222 45 89999999888888877 43445778889
Q ss_pred EeecccccceeeEEEEE
Q 015003 387 GGICNGGGGASALVLEL 403 (414)
Q Consensus 387 ~~~~~~gg~~~a~vl~~ 403 (414)
...+|.|-++.+++|+.
T Consensus 396 l~~fG~Glt~~~~ll~w 412 (413)
T 3v7i_A 396 LYAAAPGLTATALEGEW 412 (413)
T ss_dssp EEEEETTTEEEEEEEEE
T ss_pred EEEECHHHhHhhhheEe
Confidence 88888888999999875
No 60
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.92 E-value=2.2e-24 Score=214.79 Aligned_cols=256 Identities=14% Similarity=0.075 Sum_probs=192.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ +++++++|+|++.||..|..+|
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 174 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIA 174 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999998875 456778999999999975454 8999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+++|.++.. +..
T Consensus 175 ~~g~~~~vLvvg~e~~s~~-~~~--------------------------------------------------------- 196 (387)
T 3a5r_A 175 ENNKGARVLIVCSEMTTTC-FRG--------------------------------------------------------- 196 (387)
T ss_dssp HHSTTCEEEEEEEECCTTT-CCC---------------------------------------------------------
T ss_pred HhCCCCEEEEEEEeccchh-hcC---------------------------------------------------------
Confidence 9999999999999998751 000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
| .+.+ +-....+..+||||+|+||++.
T Consensus 197 ------------------~-------------~d~~----------------------~~~~~~~~lfGDGA~A~vl~~~ 223 (387)
T 3a5r_A 197 ------------------P-------------SETH----------------------LDSMIGQAILGDGAAAVIVGAD 223 (387)
T ss_dssp ------------------C-------------CSSC----------------------CSSTTHHHHBCCEEEEEEEESS
T ss_pred ------------------C-------------Cccc----------------------hhhccccceeccceeEEEEecC
Confidence 0 0000 0001122238999999999875
Q ss_pred HHHHHcC-CcceEEEEEEEEeecC-C-Cc-----------c--c--------cchHHHHHHHHHHcCCC-CCCCceeecc
Q 015003 274 VKALELG-LQVIAKIRGFADAAQA-P-EW-----------F--T--------TAPSLAIPKAIANAGLE-ASQIDYYEIN 328 (414)
Q Consensus 274 ~~a~~~~-~~~~~~i~g~~~~~~~-~-~~-----------~--~--------~~~~~a~~~al~~aGl~-~~DId~~~~h 328 (414)
+.. + ..+..++.+.+..... . .. + . ....++++++|+++|++ .+|| ++.+|
T Consensus 224 ~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~H 299 (387)
T 3a5r_A 224 PDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAH 299 (387)
T ss_dssp CCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEEC
T ss_pred CCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEEC
Confidence 421 1 1112345544432110 0 00 0 0 11246788999999998 8888 89999
Q ss_pred ccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeE
Q 015003 329 EAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASAL 399 (414)
Q Consensus 329 d~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~ 399 (414)
+.+......+.+.||++++++..+ -.+..+||+.++|..+.+.++.++-+ +.| ++.+...++.|.++.++
T Consensus 300 q~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ 378 (387)
T 3a5r_A 300 PGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL-ENGQATTGEGLEWGVLFGFGPGITVETV 378 (387)
T ss_dssp CSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEE
T ss_pred CCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCcceeeeh
Confidence 999999888999999999887542 12456899999999999999988766 545 78888888888899999
Q ss_pred EEEEecce
Q 015003 400 VLELMQAV 407 (414)
Q Consensus 400 vl~~~~~~ 407 (414)
+|+..+.+
T Consensus 379 ll~~~~~~ 386 (387)
T 3a5r_A 379 VLRSVPVI 386 (387)
T ss_dssp EEEECBCC
T ss_pred hheecccc
Confidence 99886543
No 61
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.92 E-value=5.6e-24 Score=212.01 Aligned_cols=254 Identities=18% Similarity=0.102 Sum_probs=190.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ +++++++|++++.||..|..+|
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i 178 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG-VDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLA 178 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCC-CCCchHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999998876 456788999999999975455 8999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++.. +..
T Consensus 179 ~~g~~~~vLvvg~E~~s~~-~~~--------------------------------------------------------- 200 (389)
T 1i88_A 179 ENNKGARVLVVCSEVTAVT-FRG--------------------------------------------------------- 200 (389)
T ss_dssp HTSTTCEEEEEEEECGGGT-CCC---------------------------------------------------------
T ss_pred HcCCCCEEEEEEEecccHh-HcC---------------------------------------------------------
Confidence 9999999999999998751 000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
| .+.+ +-....+..+||||+|+||+..
T Consensus 201 ------------------~-------------~d~~----------------------~~~~~~~~lfGDGA~A~vl~~~ 227 (389)
T 1i88_A 201 ------------------P-------------SDTH----------------------LDSLVGQALFGDGAAALIVGSD 227 (389)
T ss_dssp ------------------C-------------CTTC----------------------HHHHHHHHHBCCEEEEEEEESS
T ss_pred ------------------c-------------cccc----------------------cccccccceEecceEEEEEecC
Confidence 0 0000 0000011227999999999875
Q ss_pred HHHHHcCCcceEEEEEEEEeecCC--Cc-------------cc--------cchHHHHHHHHHHcCCC-CCCCceeeccc
Q 015003 274 VKALELGLQVIAKIRGFADAAQAP--EW-------------FT--------TAPSLAIPKAIANAGLE-ASQIDYYEINE 329 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~~--~~-------------~~--------~~~~~a~~~al~~aGl~-~~DId~~~~hd 329 (414)
+.. .. ..+..++.+.+...... .. +. ....++++++|+++|++ .+|| +|.+|+
T Consensus 228 ~~~-~~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq 304 (389)
T 1i88_A 228 PVP-EI-EKPIFEMVWTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSI-FWIAHP 304 (389)
T ss_dssp CCT-TT-SCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECSCHHHHHHHHHHHHHHHHHGGGTCCCTTSS-EEEECC
T ss_pred CCC-cc-CCCceEEEeeeeEEcCCCcccceeEEecCceEEEeccHHHHHHHHHHHHHHHHHHHhcCCCchhhc-eEEECC
Confidence 421 10 11113444443321100 00 00 11246788999999998 8888 899999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALV 400 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~v 400 (414)
.+......+.+.||++++++..+ -.+..+||+..+|....+.++.++-+ +.| ++.+...++.|-++.+++
T Consensus 305 ~~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~l 383 (389)
T 1i88_A 305 GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKST-QNGLKTTGEGLEWGVLFGFGPGLTIETVV 383 (389)
T ss_dssp SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEE
T ss_pred CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcc-ccCCcccCCCCceEEEEEecCccEEEEEE
Confidence 99999999999999999887542 12456899999999999999988766 555 788888888888899999
Q ss_pred EEEe
Q 015003 401 LELM 404 (414)
Q Consensus 401 l~~~ 404 (414)
|+..
T Consensus 384 l~~~ 387 (389)
T 1i88_A 384 LRSV 387 (389)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9865
No 62
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.92 E-value=3.6e-24 Score=236.92 Aligned_cols=259 Identities=15% Similarity=0.027 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCC-cceeeEccCCchHHHHHHHHHHHHHc
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS-VVCTTINKVCSSGMKAVMLAAQSIQL 115 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~-~~~~~v~~aC~s~~~al~~A~~~I~s 115 (414)
..+|+.+|+++||+++|+++++||.++++++.+ ...|..+..++..||+++. +++++++++|++++.||..|..+|++
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~s 767 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHh
Confidence 567999999999999999999999999998554 5578899999999999632 46899999999999999999999999
Q ss_pred CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHH
Q 015003 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (414)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~ 195 (414)
|.+++|||+|+|.++... ..
T Consensus 768 G~~~~vLvvg~e~~~~~~-~~----------------------------------------------------------- 787 (979)
T 3tsy_A 768 NAGARVLVVCSEITVVTF-RG----------------------------------------------------------- 787 (979)
T ss_dssp STTCEEEEEEEECTTTTC-CC-----------------------------------------------------------
T ss_pred CCCCEEEEEEEEecchhe-eC-----------------------------------------------------------
Confidence 999999999999865410 00
Q ss_pred hHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHH
Q 015003 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (414)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~ 275 (414)
++ ....-...+++.+||||+|+||++.+.
T Consensus 788 --------------------------------~~-------------------~~~~~~~~~~~lfGDGA~A~vL~~~~~ 816 (979)
T 3tsy_A 788 --------------------------------PS-------------------EDALDSLVGQALFGDGSAAVIVGSDPD 816 (979)
T ss_dssp --------------------------------CC-------------------SSCHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred --------------------------------CC-------------------ccCHHHHhhhhhccCceEEEEEecCCC
Confidence 00 000001113344899999999998665
Q ss_pred HHHcCCcceEEEEEEEEeecCCCcc-----c----------------cchHHHHHHHHHHcCCCCCCCceeeccccchhH
Q 015003 276 ALELGLQVIAKIRGFADAAQAPEWF-----T----------------TAPSLAIPKAIANAGLEASQIDYYEINEAFSVV 334 (414)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~~~~~~~-----~----------------~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~ 334 (414)
+...+........+........... . ....++++++|+++|++++|||+|.+|+++...
T Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i 896 (979)
T 3tsy_A 817 ISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAI 896 (979)
T ss_dssp SSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHH
T ss_pred ccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHH
Confidence 4333333333333333322111000 0 013578999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCC-CccccCCCccchHHHHHHHHHHHHHhcC-C------CeeEEeecccccceeeEEEEEecc
Q 015003 335 AIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKK-G------KYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 335 ~~~~~e~lGl~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~ql~~~~-~------~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
...+.+.||++++++..+- ....+||+..+|-.+.+.++...++.+. . +.++...+|+|.++.+++|+..+.
T Consensus 897 ~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~ 976 (979)
T 3tsy_A 897 LDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPM 976 (979)
T ss_dssp HHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBC
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhccc
Confidence 9999999999999876531 1345899999999999998887654321 1 234888888888999999998765
Q ss_pred e
Q 015003 407 V 407 (414)
Q Consensus 407 ~ 407 (414)
+
T Consensus 977 ~ 977 (979)
T 3tsy_A 977 V 977 (979)
T ss_dssp C
T ss_pred c
Confidence 4
No 63
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.91 E-value=7.3e-24 Score=211.95 Aligned_cols=254 Identities=14% Similarity=0.099 Sum_probs=190.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ +++++++|+|++.||..|..+|
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 191 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG-VDMPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLA 191 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CcCChHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999998887 567888999999999985455 8999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++.. +..
T Consensus 192 ~sg~~~~vLvvg~E~~s~~-~~~--------------------------------------------------------- 213 (402)
T 3awk_A 192 ENNKGARVLVACSEVTAVT-FRA--------------------------------------------------------- 213 (402)
T ss_dssp HTSTTCEEEEEEEECTTTT-CCC---------------------------------------------------------
T ss_pred HcCCCCEEEEEEEeccchh-hcC---------------------------------------------------------
Confidence 9999999999999998751 000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
| .+++ .+ ....+..+||||+|+||+..
T Consensus 214 ------------------~-------------~d~~-------~~---------------~~~~~~lfGDGA~A~vl~~~ 240 (402)
T 3awk_A 214 ------------------P-------------SETH-------LD---------------GLVGSALFGDGAAALIVGSD 240 (402)
T ss_dssp ------------------C-------------CTTC-------HH---------------HHHHHHHBCCEEEEEEEESS
T ss_pred ------------------C-------------CccC-------HH---------------HhhccccccCceEEEEEecC
Confidence 0 0000 00 00011228999999999875
Q ss_pred HHHHHcCCcceEEEEEEEEeecC-C-Cc-------------cc--------cchHHHHHHHHHHcCCC-CCCCceeeccc
Q 015003 274 VKALELGLQVIAKIRGFADAAQA-P-EW-------------FT--------TAPSLAIPKAIANAGLE-ASQIDYYEINE 329 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~-~-~~-------------~~--------~~~~~a~~~al~~aGl~-~~DId~~~~hd 329 (414)
+.. .. ..+..++.+.+..... . .. +. ....++++++|+++|++ .+|| +|.+|+
T Consensus 241 ~~~-~~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq 317 (402)
T 3awk_A 241 PVP-QE-EKPLFEIHWAGEAVLPDSDGAINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDM-FWAVHP 317 (402)
T ss_dssp CCT-TT-CCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHTHHHHHHTTCCCGGGE-EEEECC
T ss_pred CCc-cc-cCCceEEEeeeEEeeCCCchhcceEEecCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECC
Confidence 421 10 1112344444432110 0 00 00 01246788999999998 7777 799999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALV 400 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~v 400 (414)
.+......+.+.||++++++..+ -.+..+||+..+|....+.++.++-+ +.| ++.+...++.|-++.+++
T Consensus 318 ~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~g~d~vll~~fG~G~t~~~~l 396 (402)
T 3awk_A 318 GGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSE-ELHLPTTGEGFEWGFVIGFGPGLTVETLL 396 (402)
T ss_dssp SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEE
T ss_pred CcHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHhhcc-ccCCCcCCCCcceEEEEEecccceeeehe
Confidence 99999888999999999987553 12356899999999999999988766 545 788888888888899999
Q ss_pred EEEe
Q 015003 401 LELM 404 (414)
Q Consensus 401 l~~~ 404 (414)
|+..
T Consensus 397 l~~~ 400 (402)
T 3awk_A 397 LRSI 400 (402)
T ss_dssp EEEC
T ss_pred eeec
Confidence 9875
No 64
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.91 E-value=3.7e-24 Score=212.41 Aligned_cols=257 Identities=16% Similarity=0.157 Sum_probs=186.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|++++|||.+++++++ +...|..+..++..||+++....+++ +.+|+++++||..|..+|+
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 158 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCL 158 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999888 56788999999999999854448999 7999999999999999999
Q ss_pred c----CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHH
Q 015003 115 L----GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190 (414)
Q Consensus 115 s----G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a 190 (414)
+ |.+++|||+++|.+|.. +.... +.+.
T Consensus 159 a~~~~G~~~~vLvv~~E~~s~~-~~~~~------------------------------------------------~~~~ 189 (379)
T 3euo_A 159 GHTARGKPARILVLALEVSTTM-VRSEL------------------------------------------------ESID 189 (379)
T ss_dssp HHHHTTCCCEEEEEEEECCGGG-HHHHH------------------------------------------------HHHH
T ss_pred hccccCCCCEEEEEEEEeehhh-hcCcc------------------------------------------------cccc
Confidence 7 99999999999998751 11000 0000
Q ss_pred HHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEE
Q 015003 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVL 270 (414)
Q Consensus 191 ~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL 270 (414)
.+ .. .+..++++||||+|+||
T Consensus 190 ---------~~-----------------------------------------------~~---d~~~~~LFGDGAaAvvl 210 (379)
T 3euo_A 190 ---------AL-----------------------------------------------QE---TRIGIALFSDCASAVIL 210 (379)
T ss_dssp ---------HH-----------------------------------------------CC---CCCHHHHBCCEEEEEEE
T ss_pred ---------cc-----------------------------------------------HH---HhhcceeecCccEEEEE
Confidence 00 00 01123448999999999
Q ss_pred eCHHHHHHcCCcceEEEEEEEEeecC--------------------CCccc---cchHHHHHHHHHH-------cCCCCC
Q 015003 271 VSGVKALELGLQVIAKIRGFADAAQA--------------------PEWFT---TAPSLAIPKAIAN-------AGLEAS 320 (414)
Q Consensus 271 ~s~~~a~~~~~~~~~~i~g~~~~~~~--------------------~~~~~---~~~~~a~~~al~~-------aGl~~~ 320 (414)
+..+... ....+...+.+....... +..+. ....+.++++|++ +|++++
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~~l~~~gl~~~ 289 (379)
T 3euo_A 211 SNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPA 289 (379)
T ss_dssp ECCTTCC-TTCCCSEEEEEEEEEECTTCGGGEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGG
T ss_pred ecCCCCc-cccccceeeeceeEEEecCchhhcCceecCCCcEEEeChHHHHHHHHHHHHHHHHHHHhcCcccccccCChh
Confidence 9754211 011222345554332210 00000 1124678888886 489999
Q ss_pred CCceeeccccchhHHHHHHHHcCCCCCCcCCCCC-ccccCCCccchHHHHHHHHHHHH--HhcC----CCeeEEeecccc
Q 015003 321 QIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGVL--RHKK----GKYGVGGICNGG 393 (414)
Q Consensus 321 DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~ql--~~~~----~~~~l~~~~~~g 393 (414)
|||++ +|+.+......+.+.||++++++..+-. +..+||+..+|-...+.++.++- +.+. +++.+...+|.|
T Consensus 290 did~~-~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~l~~Gg~~~d~vll~~fG~G 368 (379)
T 3euo_A 290 DFDWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPG 368 (379)
T ss_dssp GSEEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSHHHHTTCGGGCCCSEEEEEEEETT
T ss_pred HeeEE-eCCCChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhhcccccCCCCCCCCeEEEEEECcc
Confidence 99987 9999999999999999999998755321 22579999999888888877643 2222 377788888888
Q ss_pred cceeeEEEEE
Q 015003 394 GGASALVLEL 403 (414)
Q Consensus 394 g~~~a~vl~~ 403 (414)
-++.+++|+.
T Consensus 369 ~t~~~~ll~~ 378 (379)
T 3euo_A 369 INVEMCMLKR 378 (379)
T ss_dssp TEEEEEEEEE
T ss_pred cEeEEEEEEe
Confidence 8899999885
No 65
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.91 E-value=5e-24 Score=213.22 Aligned_cols=255 Identities=16% Similarity=0.109 Sum_probs=191.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ .++++++|+|++.||..|..+|
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i 183 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAG-VDMPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLA 183 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSC-CEESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 47799999999999999999999999999998876 446778999999999985454 8999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+++|.++.. +. +
T Consensus 184 ~~g~~~~vLvvg~E~~s~~-~~-------------------------~-------------------------------- 205 (402)
T 1ee0_A 184 ENNKGSRVLIVCSEITAIL-FH-------------------------G-------------------------------- 205 (402)
T ss_dssp HHSTTCCEEEEEEECGGGG-CC-------------------------C--------------------------------
T ss_pred HcCCCCEEEEEEEeccchh-hc-------------------------C--------------------------------
Confidence 9999999999999997751 00 0
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
| ++.+ +-+...+..+||||+|+||++.
T Consensus 206 ------------------~-------------~d~~----------------------~~~~~~~~lfGDGA~A~vl~~~ 232 (402)
T 1ee0_A 206 ------------------P-------------NENH----------------------LDSLVAQALFGDGAAALIVGSG 232 (402)
T ss_dssp ------------------C-------------CTTC----------------------HHHHHHTTTBCCEEEEEEEESS
T ss_pred ------------------C-------------cccc----------------------hhhhccceeEecceEEEEEecC
Confidence 0 0000 0001123338999999999875
Q ss_pred HHHHHcC-CcceEEEEEEEEeecCCC---------------ccc--------cchHHHHHHHHHHcCCC-CCCCceeecc
Q 015003 274 VKALELG-LQVIAKIRGFADAAQAPE---------------WFT--------TAPSLAIPKAIANAGLE-ASQIDYYEIN 328 (414)
Q Consensus 274 ~~a~~~~-~~~~~~i~g~~~~~~~~~---------------~~~--------~~~~~a~~~al~~aGl~-~~DId~~~~h 328 (414)
+. .+ ..+..++.+.+....... .+. ....++++++|+++|++ .+|| ++.+|
T Consensus 233 ~~---~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~H 308 (402)
T 1ee0_A 233 PH---LAVERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSV-FWMVH 308 (402)
T ss_dssp CC---TTTCCCCEEEEEEEEEECTTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEEC
T ss_pred CC---ccccCCceEEEeeeeEEcCCchHhcCceeccCceEEEecchHHHHHHHHHHHHHHHHHHHcCCCccccc-eEEEC
Confidence 42 11 111234554443211000 000 11246888999999998 8888 89999
Q ss_pred ccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeE
Q 015003 329 EAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASAL 399 (414)
Q Consensus 329 d~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~ 399 (414)
+.+......+.+.||++++++..+ -.+..+||+..+|..+.+.+++++-+ +.| ++.+...++.|-++.++
T Consensus 309 q~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ 387 (402)
T 1ee0_A 309 PGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSM-AEGKSTTGEGLDCGVLFGFGPGMTVETV 387 (402)
T ss_dssp CSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTBTTBSEEEEEEEETTTEEEEE
T ss_pred CCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEEEE
Confidence 999999999999999999887652 12456899999999999999988766 445 77888888888889999
Q ss_pred EEEEecc
Q 015003 400 VLELMQA 406 (414)
Q Consensus 400 vl~~~~~ 406 (414)
+|+....
T Consensus 388 ll~~~~~ 394 (402)
T 1ee0_A 388 VLRSVRV 394 (402)
T ss_dssp EEEECBC
T ss_pred EEEEecc
Confidence 9987543
No 66
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.91 E-value=4.6e-24 Score=214.09 Aligned_cols=254 Identities=13% Similarity=0.054 Sum_probs=191.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ +++++++|+|++.||..|..+|
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 196 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG-VNMPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDLA 196 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCC-cccCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHHH
Confidence 47799999999999999999999999999999887 557788999999999985465 8999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++.. +.. +
T Consensus 197 ~sg~~~~vLvvg~E~~s~~-~~~-------------------------~------------------------------- 219 (413)
T 2p0u_A 197 ENNAGARVLAICSEVTAVT-FRA-------------------------P------------------------------- 219 (413)
T ss_dssp HHSTTCEEEEEEEECSTTT-CCC-------------------------C-------------------------------
T ss_pred HhCCCCEEEEEEEhhcchh-ccC-------------------------C-------------------------------
Confidence 9999999999999998751 000 0
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
+. ++ ++ ....+..+||||+|+||++.
T Consensus 220 --------~d-----------------~~---~~--------------------------~~~~~~lfGDGA~A~vl~~~ 245 (413)
T 2p0u_A 220 --------SE-----------------TH---ID--------------------------GLVGSALFGDGAAAVIVGSD 245 (413)
T ss_dssp --------CT-----------------TC---HH--------------------------HHHHHHHBCCEEEEEEEESS
T ss_pred --------Cc-----------------cC---hh--------------------------hhcccceeecccEEEEEecC
Confidence 00 00 00 00011227999999999875
Q ss_pred HHHHHcCCcceEEEEEEEEeecCC--Cc-------------cc--------cchHHHHHHHHHHcCCC-CCCCceeeccc
Q 015003 274 VKALELGLQVIAKIRGFADAAQAP--EW-------------FT--------TAPSLAIPKAIANAGLE-ASQIDYYEINE 329 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~~--~~-------------~~--------~~~~~a~~~al~~aGl~-~~DId~~~~hd 329 (414)
+.. .. ..+...+.+.+...... .. +. ....++++++|+++|++ .+|| +|.+|+
T Consensus 246 ~~~-~~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq 322 (413)
T 2p0u_A 246 PRP-GI-ERPIYEMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNEL-FWAVHP 322 (413)
T ss_dssp CCT-TT-CCCSEEEEEEEEEECTTCTTSSEEEEETTEEEEECCSCHHHHHHHHHHHHHHHHHHHTTCCSGGGS-EEEECC
T ss_pred CCc-cc-cCCceEEEecccEEeCCChhhcCceEecCceEEEeccHHHHHHHHHHHHHHHHHHHHcCCCCccce-EEEECC
Confidence 421 10 11113444444321100 00 00 11246888999999998 7888 899999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALV 400 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~v 400 (414)
.+......+.+.||++++++..+ -.+..+||+..+|..+.+.++..+-+ +.| ++.+...++.|-++.+++
T Consensus 323 ~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~l 401 (413)
T 2p0u_A 323 GGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSL-ESNKSTFGEGSEWGFLIGFGPGLTVETLL 401 (413)
T ss_dssp SSHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEE
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHhcc-ccCCcccCCCcceEEEEEeCccceeeeee
Confidence 99999999999999999887542 12356899999999999999988766 545 788888888888999999
Q ss_pred EEEe
Q 015003 401 LELM 404 (414)
Q Consensus 401 l~~~ 404 (414)
|+..
T Consensus 402 l~~~ 405 (413)
T 2p0u_A 402 LRAL 405 (413)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9875
No 67
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.91 E-value=1.4e-23 Score=237.26 Aligned_cols=279 Identities=15% Similarity=0.151 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHHcCC-Cccc----cC----eEEEEeecCCC------------------------CCCcHHHHHHHH
Q 015003 37 ATKLGSIAIECALKRANV-KPLL----VQ----EVFFGNVLSAN------------------------LGQAPARQAALG 83 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi-~~~~----Id----~vi~g~~~~~~------------------------~~~~~a~~va~~ 83 (414)
...|+++++.+||++||+ +|.+ |+ .+++|+..+.+ .....+.+++..
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 456899999999999999 4777 44 45566553320 012256678884
Q ss_pred -CCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 84 -AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 84 -lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
||+. +|+++++++|+|++.||+.|+..|++|++|++||+|+|.++. .....
T Consensus 1291 ~lgl~--GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~--~~~~~------------------------ 1342 (1887)
T 2uv8_A 1291 LISSS--GPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE--EGSFE------------------------ 1342 (1887)
T ss_dssp TTCCC--SCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHH------------------------
T ss_pred HcCCc--cceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHH------------------------
Confidence 9994 799999999999999999999999999999999999998753 11100
Q ss_pred ccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhc
Q 015003 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (414)
Q Consensus 163 ~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 242 (414)
+...+.+.+..++++ ....++..|+| |+.+
T Consensus 1343 -------------f~~m~als~~~~e~~---------------------~g~~p~~~~RP---fd~~------------- 1372 (1887)
T 2uv8_A 1343 -------------FGNMKATSNTLEEFE---------------------HGRTPAEMSRP---ATTT------------- 1372 (1887)
T ss_dssp -------------HHHTTCBCCHHHHHH---------------------TTCCGGGSCCT---TBTT-------------
T ss_pred -------------HHHhhhhccchhhhc---------------------ccCCCccCcCC---Cccc-------------
Confidence 011111111111111 00112456777 6555
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc----c----------------c
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----T----------------T 302 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~----------------~ 302 (414)
++|++ ++||++++||++.+.|+++|.++++.|.|++.+++..... . .
T Consensus 1373 ------r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~p 1439 (1887)
T 2uv8_A 1373 ------RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYA 1439 (1887)
T ss_dssp ------CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSC
T ss_pred ------CCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCC
Confidence 77887 7999999999999999999999999999999988743110 0 0
Q ss_pred c-----------------------------------------------------------------------------hH
Q 015003 303 A-----------------------------------------------------------------------------PS 305 (414)
Q Consensus 303 ~-----------------------------------------------------------------------------~~ 305 (414)
. ..
T Consensus 1440 s~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~ 1519 (1887)
T 2uv8_A 1440 SPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRI 1519 (1887)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSS
T ss_pred CcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHH
Confidence 0 03
Q ss_pred HHHHHHHHHcCCCCCCCceeeccccchhH-----HHHH---HHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHH
Q 015003 306 LAIPKAIANAGLEASQIDYYEINEAFSVV-----AIAN---QKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (414)
Q Consensus 306 ~a~~~al~~aGl~~~DId~~~~hd~~~~~-----~~~~---~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q 376 (414)
.+++++|+++|++++|||++++|.+++.. ...+ ...+|-.. .++.+...|..+|||.||+|+.+++.++++
T Consensus 1520 ~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~ 1599 (1887)
T 2uv8_A 1520 APLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQI 1599 (1887)
T ss_dssp CHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHH
Confidence 68999999999999999999999999932 1112 23334432 357777778889999999999999999999
Q ss_pred HHhc-------------------------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 377 LRHK-------------------------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 377 l~~~-------------------------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
|+.+ ..++.++++++.||+++.+||+..+.
T Consensus 1600 L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~~ 1660 (1887)
T 2uv8_A 1600 LNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDY 1660 (1887)
T ss_dssp HTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTHH
T ss_pred HHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCCc
Confidence 9864 12456778889999999999987654
No 68
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.91 E-value=9.6e-24 Score=211.78 Aligned_cols=252 Identities=14% Similarity=0.081 Sum_probs=189.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ +++++++|+++++||..|..+|+
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998887 446778899999999975453 89999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++.. +.. |.
T Consensus 203 ~G~~~~vLvvg~E~~s~~-~~~-------------------------~~------------------------------- 225 (413)
T 1xes_A 203 NNRGARVLVICSETTAVT-FRG-------------------------PS------------------------------- 225 (413)
T ss_dssp TSTTCCEEEEEEECTTTT-CCC-------------------------CC-------------------------------
T ss_pred cCCCCEEEEEEehhhhhh-hcC-------------------------CC-------------------------------
Confidence 999999999999998751 000 00
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
. ++ ++ ....+..+||||+|+||+..+
T Consensus 226 --------d-----------------~~---~~--------------------------~~~~~~lfGDGA~A~vl~~~~ 251 (413)
T 1xes_A 226 --------E-----------------TH---LD--------------------------SLVGQALFGDGASALIVGADP 251 (413)
T ss_dssp --------T-----------------TC---HH--------------------------HHHHHHHBCCEEEEEEEESSC
T ss_pred --------c-----------------cc---hh--------------------------hcccceeEecccEEEEEecCC
Confidence 0 00 00 000112279999999998754
Q ss_pred HHHHcCC-cceEEEEEEEEeec-CC-Cc-------------cc--------cchHHHHHHHHHHcCCC-CCCCceeeccc
Q 015003 275 KALELGL-QVIAKIRGFADAAQ-AP-EW-------------FT--------TAPSLAIPKAIANAGLE-ASQIDYYEINE 329 (414)
Q Consensus 275 ~a~~~~~-~~~~~i~g~~~~~~-~~-~~-------------~~--------~~~~~a~~~al~~aGl~-~~DId~~~~hd 329 (414)
.. +. .+..++.+.+.... .. .. +. ....++++++|+++|++ .+|| ++.+|+
T Consensus 252 ~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq 327 (413)
T 1xes_A 252 IP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHP 327 (413)
T ss_dssp CT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECC
T ss_pred Cc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECC
Confidence 21 11 11234555443211 00 00 00 11246888999999998 8888 799999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALV 400 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~v 400 (414)
.+......+.+.||++++++..+ -.+..+||+..++..+.+.+++++-+ +.| ++.+...++.|.++.+++
T Consensus 328 ~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~l 406 (413)
T 1xes_A 328 GGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL-QNGCSTTGEGLEMGVLFGFGPGLTIETVV 406 (413)
T ss_dssp SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEE
T ss_pred CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEeEEE
Confidence 99999999999999999987542 11356899999999999999988766 444 788888888888999999
Q ss_pred EEEe
Q 015003 401 LELM 404 (414)
Q Consensus 401 l~~~ 404 (414)
|+..
T Consensus 407 l~~~ 410 (413)
T 1xes_A 407 LKSV 410 (413)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9875
No 69
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.91 E-value=1.1e-23 Score=213.25 Aligned_cols=257 Identities=17% Similarity=0.175 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHHHc-
Q 015003 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQL- 115 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I~s- 115 (414)
.+|+.+|+++||+++|++++|||.||+++++ ++..|..+.+++..||+++....+++ +++|+++++||..|..+|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence 5999999999999999999999999999887 56788999999999999854448999 79999999999999999997
Q ss_pred ---CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHH
Q 015003 116 ---GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (414)
Q Consensus 116 ---G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~ 192 (414)
|.+++|||+++|.++.. +.... +.+.
T Consensus 190 ~~~G~~~~vLVvg~E~~S~~-~~~~~------------------------------------------------~~~~-- 218 (465)
T 3e1h_A 190 TARGKPARILVLALEVSTTM-VRSEL------------------------------------------------ESID-- 218 (465)
T ss_dssp HHTTCCCEEEEEEEECCGGG-HHHHH------------------------------------------------HHHH--
T ss_pred cccCCCCEEEEEEEeecchh-cCccc------------------------------------------------cccc--
Confidence 99999999999998751 11000 0000
Q ss_pred hHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeC
Q 015003 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (414)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s 272 (414)
.+. . .+..+.++||||+|+||+.
T Consensus 219 -------~~~-----------------------------------------------~---d~~t~~LFGDGAaAvVl~~ 241 (465)
T 3e1h_A 219 -------ALQ-----------------------------------------------E---TRIGIALFSDCASAVILSN 241 (465)
T ss_dssp -------HHT-----------------------------------------------C---CCCHHHHBCCEEEEEEEEC
T ss_pred -------ccc-----------------------------------------------c---ccccccccccceeEEEEEc
Confidence 000 0 0112344899999999997
Q ss_pred HHHHHHcCCcceEEEEEEEEeecC--------------------CCccc---cchHHHHHHHHHH-------cCCCCCCC
Q 015003 273 GVKALELGLQVIAKIRGFADAAQA--------------------PEWFT---TAPSLAIPKAIAN-------AGLEASQI 322 (414)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~~~--------------------~~~~~---~~~~~a~~~al~~-------aGl~~~DI 322 (414)
.+... ....+...+.+....... +..+. ....+.++++|++ +|++++||
T Consensus 242 ~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DI 320 (465)
T 3e1h_A 242 GIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADF 320 (465)
T ss_dssp CTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGS
T ss_pred cCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHc
Confidence 53210 001222345554332210 00000 1124678888887 67999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCC-ccccCCCccchHHHHHHHHHHH--HHhcCC----CeeEEeecccccc
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGV--LRHKKG----KYGVGGICNGGGG 395 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~q--l~~~~~----~~~l~~~~~~gg~ 395 (414)
|++ +|+.+..+...+.+.||++++++..+-- ...+||+..+|-...+.++.++ -+.+.+ ++.+...++.|-+
T Consensus 321 d~~-~Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~gfG~Glt 399 (465)
T 3e1h_A 321 DWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGIN 399 (465)
T ss_dssp EEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEEEETTTE
T ss_pred eEE-ecCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEEEhHHHh
Confidence 988 9999999999999999999998744311 2346999999977777776654 111222 6778888888889
Q ss_pred eeeEEEEEec
Q 015003 396 ASALVLELMQ 405 (414)
Q Consensus 396 ~~a~vl~~~~ 405 (414)
+.+++|+...
T Consensus 400 ~~~~llr~~~ 409 (465)
T 3e1h_A 400 VEMCMLKRRM 409 (465)
T ss_dssp EEEEEEEECC
T ss_pred hhheeeEEec
Confidence 9999999865
No 70
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.91 E-value=1.5e-23 Score=236.57 Aligned_cols=279 Identities=17% Similarity=0.155 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCC-------C-----------------CCcHHHHHHH-
Q 015003 37 ATKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSAN-------L-----------------GQAPARQAAL- 82 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~-~~~----Id----~vi~g~~~~~~-------~-----------------~~~~a~~va~- 82 (414)
...|+++++.+||++|||+ |.+ |+ .+++|+..+.+ . ....+.+++.
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4568999999999999997 776 44 46777654430 0 0124668888
Q ss_pred HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 83 ~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
.||+. +|++++.++|+|++.+|+.|+..|++|++|++||+|+|.++. .....
T Consensus 1266 ~lg~~--GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~--~~~~~------------------------ 1317 (1878)
T 2uv9_A 1266 LLSST--GPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQE--EGSYE------------------------ 1317 (1878)
T ss_dssp TCCCC--CCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCH--HHHHH------------------------
T ss_pred hcCCC--CCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHH------------------------
Confidence 49994 799999999999999999999999999999999999998653 11100
Q ss_pred ccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhc
Q 015003 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (414)
Q Consensus 163 ~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 242 (414)
+...+.+.+..++++ ....++..|+| |+.+
T Consensus 1318 -------------f~~m~als~~~de~a---------------------~g~~p~~~~RP---fd~~------------- 1347 (1878)
T 2uv9_A 1318 -------------FANMGATSNAKEEFA---------------------RGREPGEMSRP---TSTT------------- 1347 (1878)
T ss_dssp -------------HHHHTCBCCHHHHHT---------------------TTCCTTSSCCS---SBTT-------------
T ss_pred -------------HHHhhhhccchhhhh---------------------cCCCcccCcCC---CccC-------------
Confidence 011111111111111 00113557777 6555
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc----ccc---------------
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----TTA--------------- 303 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~~~--------------- 303 (414)
++|++ .+||++++||++.+.|+++|.++++.|.|++.+++..... +.+
T Consensus 1348 ------r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~ 1414 (1878)
T 2uv9_A 1348 ------RNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSP 1414 (1878)
T ss_dssp ------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCG
T ss_pred ------CCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCc
Confidence 77888 7999999999999999999999999999999988743110 000
Q ss_pred -----------------------------------------------------h--------------------------
Q 015003 304 -----------------------------------------------------P-------------------------- 304 (414)
Q Consensus 304 -----------------------------------------------------~-------------------------- 304 (414)
.
T Consensus 1415 ~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~ 1494 (1878)
T 2uv9_A 1415 LLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFW 1494 (1878)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 0
Q ss_pred -----HHHHHHHHHHcCCCCCCCceeeccccchhH-H-------HHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHH
Q 015003 305 -----SLAIPKAIANAGLEASQIDYYEINEAFSVV-A-------IANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARIL 370 (414)
Q Consensus 305 -----~~a~~~al~~aGl~~~DId~~~~hd~~~~~-~-------~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l 370 (414)
..+++++|+.+|++++|||++++|.+++.. . ......+|-.. .++.+...|..+|||.||+|+.++
T Consensus 1495 ~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~l 1574 (1878)
T 2uv9_A 1495 RRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWML 1574 (1878)
T ss_dssp TTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHH
T ss_pred ccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHH
Confidence 168999999999999999999999999942 1 11223334332 357777778889999999999999
Q ss_pred HHHHHHHHhc-------------------------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 371 VTLLGVLRHK-------------------------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 371 ~~~~~ql~~~-------------------------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+.++++|+.+ ..++.+++++|.||+++.+||+..+.
T Consensus 1575 i~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~~ 1641 (1878)
T 2uv9_A 1575 NGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPKY 1641 (1878)
T ss_dssp HHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCCc
Confidence 9999999864 12456778899999999999997654
No 71
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.5e-24 Score=237.76 Aligned_cols=280 Identities=14% Similarity=0.146 Sum_probs=199.6
Q ss_pred CHHHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCCC------------------------CCcHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSANL------------------------GQAPARQAAL 82 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~-~~~----Id----~vi~g~~~~~~~------------------------~~~~a~~va~ 82 (414)
....|+.+++.+||++||++ |.+ |+ .+++|+..+.+. ....+.+++.
T Consensus 1011 P~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~ 1090 (1688)
T 2pff_A 1011 PITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNM 1090 (1688)
T ss_dssp SSTTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHH
Confidence 34569999999999999997 766 34 355555443310 1124567887
Q ss_pred -HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccc
Q 015003 83 -GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD 161 (414)
Q Consensus 83 -~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (414)
.||+. +|+++++++|+|++.||..|+.+|++|++|++||+|+|.++..++....
T Consensus 1091 ~~LGl~--GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa----------------------- 1145 (1688)
T 2pff_A 1091 LLISSS--GPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFG----------------------- 1145 (1688)
T ss_dssp SSCCCC--CCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTT-----------------------
T ss_pred HHcCCc--CCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHH-----------------------
Confidence 68984 7999999999999999999999999999999999999997653211100
Q ss_pred cccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHh
Q 015003 162 VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (414)
Q Consensus 162 ~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (414)
.++.++ .+. ..+.. ...++..|+| |+.+
T Consensus 1146 -----~mgaLS--------~~~--------------------~e~a~----G~~Pd~~cRP---Fd~~------------ 1173 (1688)
T 2pff_A 1146 -----NMKATS--------NTL--------------------EEFEH----GRTPAEMSRP---ATTT------------ 1173 (1688)
T ss_dssp -----TTSCSC--------CTT--------------------TTTTS----SCCSSSSCCS---SSSS------------
T ss_pred -----hccccc--------cCh--------------------hhhhc----CCChhhccCc---CccC------------
Confidence 000000 000 00000 0113556777 5555
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc------cc-------------
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------TT------------- 302 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~------~~------------- 302 (414)
++|++ ++|||+++||++.+.|+++|.++++.|.|++.+.+..... +.
T Consensus 1174 -------rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~ta 1239 (1688)
T 2pff_A 1174 -------RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKY 1239 (1688)
T ss_dssp -------CCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSC
T ss_pred -------CCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCC
Confidence 67777 7999999999999999999999999999998887632110 00
Q ss_pred ------------------------------------------------------------------------------ch
Q 015003 303 ------------------------------------------------------------------------------AP 304 (414)
Q Consensus 303 ------------------------------------------------------------------------------~~ 304 (414)
..
T Consensus 1240 PSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~ 1319 (1688)
T 2pff_A 1240 ASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPR 1319 (1688)
T ss_dssp SSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTT
T ss_pred CCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHH
Confidence 00
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccchhH-----HHHHHHHc---CCCC-CCcCCCCCccccCCCccchHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLL---GLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLG 375 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~~~-----~~~~~e~l---Gl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (414)
..+++++|+++|++++|||+++.|.+++.. ...+.+.+ |-.. .++.+...|..+|||.||+|+.+++.+++
T Consensus 1320 ~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~ll 1399 (1688)
T 2pff_A 1320 IAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQ 1399 (1688)
T ss_dssp CCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHH
Confidence 367899999999999999999999888831 11112233 3322 35777777888999999999999999999
Q ss_pred HHHhc-------------------------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 376 VLRHK-------------------------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 376 ql~~~-------------------------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+|+.+ ..++.++++++.||+++.+||+..+.
T Consensus 1400 aL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~~ 1461 (1688)
T 2pff_A 1400 ILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDY 1461 (1688)
T ss_dssp HSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSSS
T ss_pred HHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCCc
Confidence 99864 11345677889999999999998665
No 72
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.90 E-value=1.5e-23 Score=209.20 Aligned_cols=254 Identities=14% Similarity=0.085 Sum_probs=189.8
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHH
Q 015003 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (414)
Q Consensus 24 ~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~ 103 (414)
++.++.-..++.+..+|+.+|+++||++ +++++||.+++|+.++....+..+..++..||+++++++++++++|+|++
T Consensus 38 Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~ 115 (396)
T 1xpm_A 38 GQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAAT 115 (396)
T ss_dssp CCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHH
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHH
Confidence 3333332335689999999999999998 78999999999998887777889999999999976689999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCH
Q 015003 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (414)
Q Consensus 104 ~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~ 183 (414)
.||..|..+|++|.+++|||+|+|. +... .
T Consensus 116 ~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~--~----------------------------------------------- 145 (396)
T 1xpm_A 116 PAIQLAKDYLATRPNEKVLVIATDT-ARYG--L----------------------------------------------- 145 (396)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEEEEE-ECCC--T-----------------------------------------------
T ss_pred HHHHHHHHHHHcCCCCEEEEEeehh-hccc--c-----------------------------------------------
Confidence 9999999999999999999999997 3200 0
Q ss_pred HHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccC
Q 015003 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (414)
Q Consensus 184 ~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (414)
+. +++++ +||
T Consensus 146 -------------------------------------------~~--------------------~~~~~-------~Gd 155 (396)
T 1xpm_A 146 -------------------------------------------NS--------------------GGEPT-------QGA 155 (396)
T ss_dssp -------------------------------------------TC--------------------SSGGG-------CEE
T ss_pred -------------------------------------------CC--------------------CCCcc-------ccc
Confidence 00 11123 799
Q ss_pred ceeEEEEeCHHHHHHcCCcceEEEEEEEEee-c-----CCCc------ccc--------chHHHHHHHHHHcCCCCCCCc
Q 015003 264 GAAALVLVSGVKALELGLQVIAKIRGFADAA-Q-----APEW------FTT--------APSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 264 GAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~-~-----~~~~------~~~--------~~~~a~~~al~~aGl~~~DId 323 (414)
||+|+||++.+ .++....+.+... + .|.. .+. ...++++++|+++|++++|||
T Consensus 156 GA~A~vl~~~~-------~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did 228 (396)
T 1xpm_A 156 GAVAMVIAHNP-------SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFA 228 (396)
T ss_dssp EEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCS
T ss_pred ceEEEEeccCC-------ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999998642 2333333333222 1 1111 010 135789999999999999999
Q ss_pred eeeccccchhHHHHHHHHc-----CCCCCCcCCC-----CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccc
Q 015003 324 YYEINEAFSVVAIANQKLL-----GLDPEQVNAH-----GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG 393 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~l-----Gl~~~~vn~~-----Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~g 393 (414)
+|.+|+++..+.....+.| +++++++... --...+||+..+|-...+.+++.+-+.+.|++.+..++|.|
T Consensus 229 ~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG 308 (396)
T 1xpm_A 229 SLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSG 308 (396)
T ss_dssp EEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETT
T ss_pred EEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcc
Confidence 9999999999888888887 6665433100 00245899999999888888887644456788888777777
Q ss_pred cceeeEEEEEecc
Q 015003 394 GGASALVLELMQA 406 (414)
Q Consensus 394 g~~~a~vl~~~~~ 406 (414)
-+...++++..+.
T Consensus 309 ~~~~~~~~~v~~~ 321 (396)
T 1xpm_A 309 SVGEFYSATLVEG 321 (396)
T ss_dssp TEEEEEEEEECTT
T ss_pred hhheEEEEEEccc
Confidence 6777788887765
No 73
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.89 E-value=2.7e-23 Score=199.59 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=176.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
....+|+.+|+++||+++|++++|||.+++++.+++ ...+..++..|+ .|.++++++|+|++++|..|..+|+
T Consensus 53 ~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q---~~~A~~va~~Lg----ipafdV~~ACsg~~~AL~~Aa~~I~ 125 (347)
T 3lma_A 53 MAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ---NVTANYVARHLK----IPFLCLFGACSTSMESIAISSALID 125 (347)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS---STTHHHHHHHHC----CCEEEBCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc---hhHHHHHHHHhC----CCEEEecChhHHHHHHHHHHHHHHh
Confidence 466889999999999999999999999999998873 237778888885 4799999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|+++..+..+..
T Consensus 126 sG~~~~VLVVGaE~~S~aerq~r~-------------------------------------------------------- 149 (347)
T 3lma_A 126 GGFAKRALAATSSHNATAERQFRY-------------------------------------------------------- 149 (347)
T ss_dssp TTSCSEEEEEEEECGGGTTCCC----------------------------------------------------------
T ss_pred cCCCCEEEEEEeccccchhhhccC--------------------------------------------------------
Confidence 999999999999999874211100
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
|. ++-..+|. ....++|||+|+||+...
T Consensus 150 -----------------p~-------------------------e~g~q~p~----------ta~~t~dGAGA~VL~~~g 177 (347)
T 3lma_A 150 -----------------PT-------------------------EYGGQKPG----------TATSTVTGSGAVVLSQQP 177 (347)
T ss_dssp ------------------------------------------------------------------CCCEEEEEEEESSC
T ss_pred -----------------cc-------------------------hhcccCCc----------hhcEEccceeEEEEEecC
Confidence 00 00000010 111147999999999642
Q ss_pred HHHHcCCcceEEEEEEEEee--c----CCCcccc----chHHHHHHHHHHcCCCCCCCceee---ccccchhHHHHHHHH
Q 015003 275 KALELGLQVIAKIRGFADAA--Q----APEWFTT----APSLAIPKAIANAGLEASQIDYYE---INEAFSVVAIANQKL 341 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~--~----~~~~~~~----~~~~a~~~al~~aGl~~~DId~~~---~hd~~~~~~~~~~e~ 341 (414)
.. .+|++..... + ++..++. ...+++++.|+++|++++|+|+|. +|+.+......++++
T Consensus 178 ------~~--p~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~ 249 (347)
T 3lma_A 178 ------GG--IKITSATVGRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKE 249 (347)
T ss_dssp ------CS--EEEEEEECCCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHH
T ss_pred ------CC--CceeeeeeeeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHH
Confidence 12 2444443221 1 2233331 234678999999999999999999 778888888889999
Q ss_pred cCCCCCCcCCCCCccccCCC-c--------cchHHHHHHHHHHHHHhcCCCeeEEeecccccc-------------eeeE
Q 015003 342 LGLDPEQVNAHGGAVSLGHP-L--------GCSGARILVTLLGVLRHKKGKYGVGGICNGGGG-------------ASAL 399 (414)
Q Consensus 342 lGl~~~~vn~~Gg~~~~Gh~-~--------gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~-------------~~a~ 399 (414)
+|++.++...+=|..-|+.. . |++....-...+.+|+.+..+|-|.+..+..-+ .-++
T Consensus 250 ~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGalls~~~~~q~~sip~iah~v 329 (347)
T 3lma_A 250 EGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGALLSPTIIQQKESIPCIAHGV 329 (347)
T ss_dssp TTCCCGGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEECCCHHHHHTTCCCCEEEEEE
T ss_pred cCCChhHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcCcccEEEEEecccccCcchhccCCccChhhEEE
Confidence 99998766555445555532 2 667677777788899988888877765554431 3467
Q ss_pred EEEEecc
Q 015003 400 VLELMQA 406 (414)
Q Consensus 400 vl~~~~~ 406 (414)
++|..++
T Consensus 330 ~~e~~~~ 336 (347)
T 3lma_A 330 VFERAER 336 (347)
T ss_dssp EEEEC--
T ss_pred EEEeecc
Confidence 8887665
No 74
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.89 E-value=5.6e-23 Score=204.14 Aligned_cols=244 Identities=15% Similarity=0.096 Sum_probs=182.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHH
Q 015003 31 SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAA 110 (414)
Q Consensus 31 ~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~ 110 (414)
..++++..+|+.+|+++||++++ +++||.|++++.+++...|..+..++..||+++.+++++++++|++++.||..|.
T Consensus 50 ~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~ 127 (388)
T 3v4n_A 50 NPISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAK 127 (388)
T ss_dssp CCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHH
Confidence 34578999999999999999997 9999999999999888788999999999999866899999999999999999999
Q ss_pred HHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHH
Q 015003 111 QSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190 (414)
Q Consensus 111 ~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a 190 (414)
.+|++|.+++|||+++|.++...
T Consensus 128 ~~i~sg~~~~vLVvg~e~~s~~~--------------------------------------------------------- 150 (388)
T 3v4n_A 128 NHVALHPDKKVLVVAADIAKYGL--------------------------------------------------------- 150 (388)
T ss_dssp HHHHHCTTCEEEEEEEEEECCCT---------------------------------------------------------
T ss_pred HHHhcCCCCEEEEEEehhhcccC---------------------------------------------------------
Confidence 99999999999999999987510
Q ss_pred HHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEE
Q 015003 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVL 270 (414)
Q Consensus 191 ~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL 270 (414)
+. . ++..+||||+|+||
T Consensus 151 ------------------------------------~~--------------------~-------~~~lfGDGA~A~ll 167 (388)
T 3v4n_A 151 ------------------------------------NS--------------------G-------GEPTQGAGAVAMLV 167 (388)
T ss_dssp ------------------------------------TC--------------------T-------TGGGCEEEEEEEEE
T ss_pred ------------------------------------CC--------------------C-------CCCccccceeEEEe
Confidence 00 0 01127999999999
Q ss_pred eCHHHHHHcCCcceEEEE--EEEEeec-----CCC--ccc------------cchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 271 VSGVKALELGLQVIAKIR--GFADAAQ-----APE--WFT------------TAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 271 ~s~~~a~~~~~~~~~~i~--g~~~~~~-----~~~--~~~------------~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+..+. + ..+. ..+...+ .|. .+. .....+++++++++|++++|||++.+|+
T Consensus 168 ~~~~~-------i-l~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq 239 (388)
T 3v4n_A 168 SSEPR-------I-LALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHI 239 (388)
T ss_dssp EESCS-------S-EEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECC
T ss_pred ecCCC-------c-eEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCC
Confidence 87431 1 1111 1111111 111 000 1124688999999999999999999999
Q ss_pred cchhHH------------HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHH-HHhcCCCeeEEeecccccce
Q 015003 330 AFSVVA------------IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV-LRHKKGKYGVGGICNGGGGA 396 (414)
Q Consensus 330 ~~~~~~------------~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q-l~~~~~~~~l~~~~~~gg~~ 396 (414)
+|..+. ....+.|+++.++.... ...+||+..+|-...+.+++.+ -+.+.|++.+..++|.|-+.
T Consensus 240 p~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~~~~--~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~~a 317 (388)
T 3v4n_A 240 PYTKMGKKALLAKISDQTEAEQERILARYEESIIY--SRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVA 317 (388)
T ss_dssp SSHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTTT--GGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEE
T ss_pred CcchHHHHHHHHHHhcccHHHHHHhCCCHHHHhhH--HHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCccee
Confidence 775532 23466777777765543 5668999999988888888776 34456777777666666666
Q ss_pred eeEEEEEecc
Q 015003 397 SALVLELMQA 406 (414)
Q Consensus 397 ~a~vl~~~~~ 406 (414)
....++..+.
T Consensus 318 e~~~~~v~~~ 327 (388)
T 3v4n_A 318 EFFTGELVAG 327 (388)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEEccC
Confidence 5555555444
No 75
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.88 E-value=9.2e-23 Score=204.31 Aligned_cols=243 Identities=13% Similarity=0.036 Sum_probs=179.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHH
Q 015003 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (414)
Q Consensus 32 ~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~ 111 (414)
.++++..+|+.+|+++||+++| +++||.|++++.+++...|..+..++..||+++.+++++++++|++++.||..|..
T Consensus 80 ~~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~ 157 (425)
T 3sqz_A 80 PITDDVVTLAAGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKL 157 (425)
T ss_dssp CTTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHH
Confidence 4578999999999999999998 99999999999988877888999999999998568999999999999999999999
Q ss_pred HHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHH
Q 015003 112 SIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191 (414)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~ 191 (414)
+|++|.+++|||+++|.++... .+
T Consensus 158 ~i~sg~~~~vLVvgae~~s~~~-~~------------------------------------------------------- 181 (425)
T 3sqz_A 158 HVEKHPDTRVLVLASDIAKYGI-GT------------------------------------------------------- 181 (425)
T ss_dssp HHHHSTTCEEEEEEEEEECCCT-TS-------------------------------------------------------
T ss_pred HHHcCCCCeEEEEEEehhcccC-CC-------------------------------------------------------
Confidence 9999999999999999987510 00
Q ss_pred HhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEe
Q 015003 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLV 271 (414)
Q Consensus 192 ~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~ 271 (414)
. ++..+||||+|+||+
T Consensus 182 ---------------------------------------------------------~-------~~~lfGDGA~A~ll~ 197 (425)
T 3sqz_A 182 ---------------------------------------------------------P-------GESTQGAGSIAMLVK 197 (425)
T ss_dssp ---------------------------------------------------------G-------GGGGCEEEEEEEEEE
T ss_pred ---------------------------------------------------------C-------CCCcccceeeEEEee
Confidence 0 011279999999998
Q ss_pred CHHHHHHcCCcceEEEE--EEEEeecC-----CC--ccc------------cchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 272 SGVKALELGLQVIAKIR--GFADAAQA-----PE--WFT------------TAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 272 s~~~a~~~~~~~~~~i~--g~~~~~~~-----~~--~~~------------~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
..+. + ..+. ..+...+. |. .+. ....++++++++++|++++|||++.+|++
T Consensus 198 ~~~~-------i-l~~~~~s~~~~~d~~df~~p~~~~~~~~dG~~~~~~~~~~l~~~~~~~l~~~gl~~~Did~~v~Hqp 269 (425)
T 3sqz_A 198 KDPR-------I-LILHDETLAQTRDIMDFWRPNYTTTPYVNGMYSTKQYLDMLKTTWAEYQKRFDVSLTDFAAFCFHLP 269 (425)
T ss_dssp ESCS-------S-EEECSCCEEEECCCCSEECCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred cCCc-------e-EEEEeecccchhhcccccccCCCcceeeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEECCC
Confidence 7431 1 1111 11111111 11 000 11247899999999999999999999998
Q ss_pred chhHHH-------------HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHH-HHhcCCCeeEEeecccccce
Q 015003 331 FSVVAI-------------ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV-LRHKKGKYGVGGICNGGGGA 396 (414)
Q Consensus 331 ~~~~~~-------------~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q-l~~~~~~~~l~~~~~~gg~~ 396 (414)
+..+.+ ...+.|+++.++...+ ...+||+..+|-...+.+++.+ -+.+.|++.+..++|.|-+.
T Consensus 270 ~~k~~~ka~~ril~~~~~~~~~~~l~~~~e~~~~~--~~~~GNt~sASi~l~L~~~l~~~g~l~~Gd~ill~s~GsG~~a 347 (425)
T 3sqz_A 270 FPKLALKGFNKIMDKQVPSDLQEKLKVNFEASILY--SKQIGNIYTGSLFLGLLSLLENSQNLVAGDKIALFSYGSGAVA 347 (425)
T ss_dssp SHHHHHHHHHHHCCTTSCHHHHHHHHHHHHHHHTT--HHHHBCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEE
T ss_pred cchhHHHHHHHHHhccchHHHHHHhCCCHHHHhhH--HhccCccHHHHHHHHHHHHHHhcCCCCCCCEEEEEcccCCcce
Confidence 865433 3455666666665443 5668999999988888888776 34456777777666666555
Q ss_pred eeEEEEEecc
Q 015003 397 SALVLELMQA 406 (414)
Q Consensus 397 ~a~vl~~~~~ 406 (414)
....++..+.
T Consensus 348 e~~s~~v~~~ 357 (425)
T 3sqz_A 348 EIFTGTLVKG 357 (425)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEEccc
Confidence 5555555443
No 76
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.88 E-value=5e-22 Score=199.67 Aligned_cols=98 Identities=9% Similarity=-0.029 Sum_probs=91.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCC--CCCcceeeEccCCchHHHHHHHHH
Q 015003 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAA 110 (414)
Q Consensus 33 ~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl--~~~~~~~~v~~aC~s~~~al~~A~ 110 (414)
++++..+|+.+|+++||+++|+++++||.|++++.+++...|..+..|+..||+ .+++++++++++|++++.||..|.
T Consensus 50 ~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~Dv~~ACsGg~~AL~~A~ 129 (460)
T 2v4w_A 50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAA 129 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCCCCCCcEEEEecchhHHHHHHHHHHH
Confidence 457999999999999999999999999999999998888788899999999999 336889999999999999999999
Q ss_pred HHHHcCCC--CeEEEEecccCC
Q 015003 111 QSIQLGIN--DIVVAGGMESMS 130 (414)
Q Consensus 111 ~~I~sG~~--~~vLv~g~e~~s 130 (414)
.+|++|.+ +.|||+|+|.++
T Consensus 130 ~~I~sg~~~~~~aLVVgaE~~s 151 (460)
T 2v4w_A 130 NWMESSSWDGRYAMVVCGDIAV 151 (460)
T ss_dssp HHHTSTTCCSCEEEEEEEEEEC
T ss_pred HHHHhCCccCCEEEEEeccccc
Confidence 99999985 999999999876
No 77
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.88 E-value=1.8e-21 Score=197.24 Aligned_cols=248 Identities=14% Similarity=0.103 Sum_probs=186.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCC--CCCcceeeEccCCchHHHHHHHHH
Q 015003 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAA 110 (414)
Q Consensus 33 ~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl--~~~~~~~~v~~aC~s~~~al~~A~ 110 (414)
++++..+|+.+|+++||+++|+++++||.+++++.++....+..+..++..||+ ++++++++++++|++++.||..|.
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~ 127 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCV 127 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHH
Confidence 468999999999999999999999999999999988877788999999999998 446899999999999999999999
Q ss_pred HHHHcCCC--CeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHH
Q 015003 111 QSIQLGIN--DIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188 (414)
Q Consensus 111 ~~I~sG~~--~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~ 188 (414)
.+|++|.+ ++|||+|+|.++..+ +
T Consensus 128 ~~I~sg~~~~~~vLVvg~e~~~~~~----~-------------------------------------------------- 153 (450)
T 2f82_A 128 NWVESNSWDGRYGLVICTDSAVYAE----G-------------------------------------------------- 153 (450)
T ss_dssp HHHHSTTCCSCEEEEEEEEEECCSS----S--------------------------------------------------
T ss_pred HHHHcCCCcCCeEEEEEeeeccccC----C--------------------------------------------------
Confidence 99999997 999999999864200 0
Q ss_pred HHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEE
Q 015003 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAAL 268 (414)
Q Consensus 189 ~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~ 268 (414)
...++ +||||+|+
T Consensus 154 ------------------------------------------------------------~~~~~-------fGDGA~A~ 166 (450)
T 2f82_A 154 ------------------------------------------------------------PARPT-------GGAAAIAM 166 (450)
T ss_dssp ------------------------------------------------------------TTGGG-------CEEEEEEE
T ss_pred ------------------------------------------------------------CCCcc-------cccceEEE
Confidence 00122 79999999
Q ss_pred EEeCHHHHHHcCCcceEEEEEEEEee----cCCC---cc--cc----------chHHHHHHHHH------HcCCCCCCCc
Q 015003 269 VLVSGVKALELGLQVIAKIRGFADAA----QAPE---WF--TT----------APSLAIPKAIA------NAGLEASQID 323 (414)
Q Consensus 269 vL~s~~~a~~~~~~~~~~i~g~~~~~----~~~~---~~--~~----------~~~~a~~~al~------~aGl~~~DId 323 (414)
||+..+. . .......+..... ..+. .+ .. ....+++.+++ ++|++++|||
T Consensus 167 ll~~~~~---~--~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did 241 (450)
T 2f82_A 167 LIGPDAP---I--VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDAD 241 (450)
T ss_dssp EEESSCS---E--EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCS
T ss_pred EeccCCc---e--EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcC
Confidence 9986531 0 1111112222211 0111 00 01 12357777776 7899999999
Q ss_pred eeeccccchhHHHHHHHHcCC------------------CC---------------C-------------CcCCCCC-cc
Q 015003 324 YYEINEAFSVVAIANQKLLGL------------------DP---------------E-------------QVNAHGG-AV 356 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl------------------~~---------------~-------------~vn~~Gg-~~ 356 (414)
+|.+|+++..+.....+.|++ ++ + ++.++-- ..
T Consensus 242 ~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~ 321 (450)
T 2f82_A 242 YFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPK 321 (450)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHH
T ss_pred EEEecCChHHHHHHHHHHhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHH
Confidence 999999999999999999983 22 1 1111100 23
Q ss_pred ccCCCccchHHHHHHHHHHHHH-hcCCCeeEEeecccccceeeEEEEEecc
Q 015003 357 SLGHPLGCSGARILVTLLGVLR-HKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~ql~-~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
.+||+..+|-...+.+++.+-+ ...|++.+..++|.|-++.+++++..+.
T Consensus 322 ~~GN~~saSi~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 322 QVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp HHCCCGGGHHHHHHHHHHHHHGGGCTTCEEEEEEEETTTEEEEEEEEECCC
T ss_pred hcCchHHHHHHHHHHHHHHhCccCCCCCEEEEEeecCCcccEEEEEEEeCC
Confidence 5899999999999999888753 5578888887888887888888887654
No 78
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.88 E-value=1.2e-21 Score=231.80 Aligned_cols=262 Identities=20% Similarity=0.215 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----C--------------CCcHHHHHHHHCCCCCCcceeeE
Q 015003 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----L--------------GQAPARQAALGAGIPNSVVCTTI 95 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~-----~--------------~~~~a~~va~~lgl~~~~~~~~v 95 (414)
.|+.+++.+||+|||+++++++ .|++|+...++ . ....+..|+..+|+ ++|+++|
T Consensus 80 rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~tv 157 (2512)
T 2vz8_A 80 RMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSITI 157 (2512)
T ss_dssp HHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEEE
T ss_pred HHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCceee
Confidence 4899999999999999987765 58888765432 0 11267889999999 4899999
Q ss_pred ccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHH
Q 015003 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (414)
Q Consensus 96 ~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (414)
+++|+|++.||++|++.|++|++|.+||+|++.+.. |.....
T Consensus 158 ~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~-p~~~~~------------------------------------- 199 (2512)
T 2vz8_A 158 DTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLK-PNSSLQ------------------------------------- 199 (2512)
T ss_dssp ECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCC-HHHHHH-------------------------------------
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccC-HHHHHH-------------------------------------
Confidence 999999999999999999999999999999999876 432211
Q ss_pred HHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCcccc
Q 015003 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTA 255 (414)
Q Consensus 176 ~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (414)
+ .+.+.++ +++.|+| ||.+ ++|+.
T Consensus 200 -------------~-----------~~~~~ls--------~~g~c~~---Fd~~-------------------adG~~-- 223 (2512)
T 2vz8_A 200 -------------F-----------MKLGMLS--------QDGTCRS---FDAE-------------------GTGYC-- 223 (2512)
T ss_dssp -------------H-----------HHTTCBC--------TTCSCCS---SSTT-------------------CCCBC--
T ss_pred -------------H-----------ccCCCCC--------CCCCCCC---CCCC-------------------CCCcc--
Confidence 0 0001111 2567888 7877 78898
Q ss_pred CCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC--c----cccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE--W----FTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 256 ~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~--~----~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
.|||++++||.+.+.|+ ++++.|+|++.+.|... . .+.+..++++++|++||++++||||||.|-
T Consensus 224 -----~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHG 294 (2512)
T 2vz8_A 224 -----RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHG 294 (2512)
T ss_dssp -----BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCC
T ss_pred -----eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeec
Confidence 69999999999987764 58999999999988632 1 123457899999999999999999999998
Q ss_pred cchhH-----HHHHHHHcCCC-CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------------
Q 015003 330 AFSVV-----AIANQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------------- 381 (414)
Q Consensus 330 ~~~~~-----~~~~~e~lGl~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------------- 381 (414)
..+.. ...+.+.||-. ..++.++.-|..+||+.+|+|+..++.++++|+.+-
T Consensus 295 TgT~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~ 374 (2512)
T 2vz8_A 295 TGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRL 374 (2512)
T ss_dssp CCCTTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSC
T ss_pred CCCCCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCce
Confidence 88753 23345567643 246778888999999999999999999999998640
Q ss_pred ----------CCeeEEeecccccceeeEEEEEec
Q 015003 382 ----------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 ----------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++..+.+++.||+|+.+|||...
T Consensus 375 ~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 375 QVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp EECCSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred EecCCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 124567789999999999999754
No 79
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.84 E-value=2.1e-20 Score=190.22 Aligned_cols=247 Identities=14% Similarity=0.084 Sum_probs=178.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHH---CCCCCCcceeeEccCCchHHHHHHHH
Q 015003 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALG---AGIPNSVVCTTINKVCSSGMKAVMLA 109 (414)
Q Consensus 33 ~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~---lgl~~~~~~~~v~~aC~s~~~al~~A 109 (414)
++++..+|+.+|+++||+++|+++++||.+++++.++....+..+..++.. +|++ +++++++.++|++++.||..|
T Consensus 69 ~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~~~dv~~aC~gg~~AL~~A 147 (478)
T 2p8u_A 69 DREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DIEGIDTTNACYGGTAAVFNA 147 (478)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CCBCCEEESGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-CceEEEEcchhHHHHHHHHHH
Confidence 467999999999999999999999999999999998877788899999944 5555 689999999999999999999
Q ss_pred HHHHHcCC--CCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHH
Q 015003 110 AQSIQLGI--NDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187 (414)
Q Consensus 110 ~~~I~sG~--~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~ 187 (414)
..+|++|. +++|||+++|...-.
T Consensus 148 ~~~i~sg~~~~~~aLVV~~Eia~~~------------------------------------------------------- 172 (478)
T 2p8u_A 148 VNWIESSSWDGRYALVVAGDIAVYA------------------------------------------------------- 172 (478)
T ss_dssp HHHHTSTTCCSCEEEEEEEEEECCC-------------------------------------------------------
T ss_pred HHHHHcCCccCCEEEEEEeeeeccc-------------------------------------------------------
Confidence 99999999 999999999952110
Q ss_pred HHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeE
Q 015003 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAA 267 (414)
Q Consensus 188 ~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA 267 (414)
+ .++ +..+||||+|
T Consensus 173 ------------------------~------------------------------------~~~------~~~fGdGA~A 186 (478)
T 2p8u_A 173 ------------------------T------------------------------------GNA------RPTGGVGAVA 186 (478)
T ss_dssp ------------------------S------------------------------------STT------GGGCEEEEEE
T ss_pred ------------------------C------------------------------------CCC------CCcccceeEE
Confidence 0 000 1127999999
Q ss_pred EEEeCHHHHHHcCCcceEEEEEEEEe-e-c--CCC---cc--ccc-------------hHHHHHHHHH--------HcCC
Q 015003 268 LVLVSGVKALELGLQVIAKIRGFADA-A-Q--APE---WF--TTA-------------PSLAIPKAIA--------NAGL 317 (414)
Q Consensus 268 ~vL~s~~~a~~~~~~~~~~i~g~~~~-~-~--~~~---~~--~~~-------------~~~a~~~al~--------~aGl 317 (414)
+||+..+.. .+... +.+.... . + .|. .. ..+ ..+.+++.++ ++|+
T Consensus 187 ~Ll~~~~~~-~l~~~----~~gs~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~ 261 (478)
T 2p8u_A 187 LLIGPNAPL-IFERG----LRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF 261 (478)
T ss_dssp EEEESSCSE-EECTT----CCEEEECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred EEEecCCCc-eEeec----cceecccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCC
Confidence 999865310 00000 0111100 0 0 111 00 000 0134556665 6799
Q ss_pred CCCCCceeeccccchhHHHHHHHHcC------------------------CCC---------C-------------CcCC
Q 015003 318 EASQIDYYEINEAFSVVAIANQKLLG------------------------LDP---------E-------------QVNA 351 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~~~~~~e~lG------------------------l~~---------~-------------~vn~ 351 (414)
+++|||++.+|+++..+.....+.|+ +++ + ++.+
T Consensus 262 ~~~did~~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~ 341 (478)
T 2p8u_A 262 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKA 341 (478)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTG
T ss_pred ChHHcCEEEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHH
Confidence 99999999999999999999999998 433 2 2211
Q ss_pred CC-CccccCCCccchHHHHHHHHHHHHH--hcCCCeeEEeecccccceeeEEEEEecc
Q 015003 352 HG-GAVSLGHPLGCSGARILVTLLGVLR--HKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 352 ~G-g~~~~Gh~~gasG~~~l~~~~~ql~--~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+- ....+||+..+|-...+.+++.+-+ ...|++.+..+.|.|-++.+++++..+.
T Consensus 342 ~~~~~~~~GN~~saSi~l~L~~ll~~~~~~~~~Gdrill~s~GsG~~~~~~~l~~~~~ 399 (478)
T 2p8u_A 342 SLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQD 399 (478)
T ss_dssp GGHHHHHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHhCCccCCCCCEEEEEEEcchhhhEEEEEEEeCC
Confidence 21 1345899999998888888877643 3468888887788888888888887654
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.74 E-value=6.9e-18 Score=171.39 Aligned_cols=102 Identities=11% Similarity=-0.056 Sum_probs=87.7
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCC--CCcceeeEccCCchH
Q 015003 25 MGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP--NSVVCTTINKVCSSG 102 (414)
Q Consensus 25 ~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~--~~~~~~~v~~aC~s~ 102 (414)
+.++.-..++++..+|+++|+++||+++|++|++||.|++++.+++...|..+..++..||+. +++.+|++.++|+++
T Consensus 42 i~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~ 121 (460)
T 2wya_A 42 QTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGG 121 (460)
T ss_dssp CCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhH
Confidence 334434456789999999999999999999999999999999999888899999999998642 257889999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEec
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGM 126 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~ 126 (414)
++||..|..+|++|.++.++++.+
T Consensus 122 ~~al~~A~~~i~~g~~~~~lvvv~ 145 (460)
T 2wya_A 122 TASLFNAANWMESSSWDGRYAMVV 145 (460)
T ss_dssp HHHHHHHHHHHTSTTCCSCEEEEE
T ss_pred HHHHHHHHHHHHhccccceEEEEE
Confidence 999999999999999876655533
No 81
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=94.35 E-value=0.21 Score=47.85 Aligned_cols=95 Identities=19% Similarity=0.201 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHH-HHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql 377 (414)
..++++++|+++|++++|||++.+. +......-.+.+.||+.+.+. . .+ ..|++|.. .+..+...+
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a-~-----di--~~~C~g~~~aL~~A~~~i 137 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPA-Y-----DV--SAACAGYCYGVAQADALV 137 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCE-E-----EE--ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceE-E-----Ee--ecchhhHHHHHHHhhhhh
Confidence 3689999999999999999988732 233445566788999865321 1 12 12455544 455555556
Q ss_pred HhcCCCeeEEeec----------------ccccceeeEEEEEecc
Q 015003 378 RHKKGKYGVGGIC----------------NGGGGASALVLELMQA 406 (414)
Q Consensus 378 ~~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~~ 406 (414)
+.+..++.|+... ..|...++++|+..+.
T Consensus 138 ~~g~~~~~Lvv~~E~~s~~~d~~~~~~~~lfgDGA~A~vl~~~~~ 182 (350)
T 4ewp_A 138 RSGTARHVLVVGVERLSDVVDPTDRSISFLLGDGAGAVIVAASDE 182 (350)
T ss_dssp HTTSCSEEEEEEEEEGGGGCCTTCTTTGGGBCEEEEEEEEEEESS
T ss_pred hCCCccceeEeeeeeceecccccccccccccccchheeeeecccC
Confidence 6666677664431 2344557788877654
No 82
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=93.84 E-value=0.3 Score=46.24 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+.+.+. ..+ +..+++++..+..+...++
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v-~~aC~s~~~al~~A~~~i~ 128 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFA------FDI-SAACSGFVYALSMAEKLVL 128 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCEE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCceE------EEe-CcccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 2334556788899864221 112 2345666777777777788
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.|+.. ...|...+++||+..+.
T Consensus 129 ~g~~~~vLvvg~e~~s~~~~~~dr~~~~lfGDGA~A~vl~~~~~ 172 (321)
T 3il6_A 129 SGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAET 172 (321)
T ss_dssp TSSCCCEEEEEEECGGGGSCTTCTTTGGGBCCEEEEEEEEEESS
T ss_pred CCCCCEEEEEEEccccccCCccccccceeeccccEEEEEEEcCC
Confidence 76666655322 22444667888887653
No 83
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=93.49 E-value=0.37 Score=46.36 Aligned_cols=97 Identities=16% Similarity=0.081 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+++.... ..+ +..+++++..+..+...++
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~-----~~v-~~aC~s~~~al~~A~~~i~ 143 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLA-----LDI-NLGCSGYPQALWLGMNLIQ 143 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEE-----EEE-CCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccE-----Eee-CcccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 22345667888998532111 112 3445677777888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.|+.. ...|...+++||+..+.
T Consensus 144 ~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfGDGA~A~vl~~~~~ 187 (354)
T 4efi_A 144 TGAAKRVLLAVGDTISKMIDPTDRSTSLLFGDAGTMTALETSNG 187 (354)
T ss_dssp TTSCSEEEEEEEECGGGGCCTTCHHHHTTBCCEEEEEEEEECCS
T ss_pred CCCCCEEEEEEechhcccCCccccccccccccceeEEEEeecCC
Confidence 76666665332 12344567888887653
No 84
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=93.16 E-value=0.47 Score=45.03 Aligned_cols=95 Identities=22% Similarity=0.141 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+. ... +..+++|+..+..+...++
T Consensus 62 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v-~~~C~s~~~al~~A~~~i~ 134 (323)
T 3il3_A 62 GFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAIS------FDL-AAACTGFVYALSVADQFIR 134 (323)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCEE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCccE------EEE-CCccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 2334556678899853221 112 2345666777777777788
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 135 ~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfGDGA~A~vl~~~~ 177 (323)
T 3il3_A 135 AGKVKKALVIGSDLNSRKLDETDRSTVVLFGDGAGAVILEASE 177 (323)
T ss_dssp TTSCSEEEEEEEEEGGGSCCTTCTTTTTTBCEEEEEEEEEEES
T ss_pred CCCCCEEEEEEeeccccccCccccccccccccceEEEEEEEcC
Confidence 76666655332 1234456788888754
No 85
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=93.04 E-value=0.46 Score=45.14 Aligned_cols=96 Identities=20% Similarity=0.205 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+++.... ... +..+++++..+..+...++
T Consensus 69 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~-----~~v-~~~C~s~~~al~~A~~~i~ 142 (333)
T 4dfe_A 69 AFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAA-----FDV-QAVCSGFAYAVATADSFIR 142 (333)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEE-----EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcE-----EEe-CcccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 23345567888998532111 112 3445677777888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 143 ~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfGDGA~A~vl~~~~ 185 (333)
T 4dfe_A 143 SGQHRTALVIGAETFSRILDFKDRTTCVLFGDGAGAVILQASD 185 (333)
T ss_dssp TTSCSEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEES
T ss_pred cCCCCEEEEEEeeccccccCcccccceeeeccccEEEEEEEcC
Confidence 76666655332 1234455788888765
No 86
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=92.49 E-value=0.52 Score=45.52 Aligned_cols=97 Identities=18% Similarity=0.072 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.+ .......+.+.||+.+..... .. +..+++|+..+..+...++
T Consensus 84 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~-----~v-~~~C~s~~~Al~~A~~~i~ 157 (365)
T 3gwa_A 84 AYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGAL-----DV-NLGCSGYVYGLSLAKGLVE 157 (365)
T ss_dssp HHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEE-----EE-ECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEE-----Ee-cccChHHHHHHHHHHHHHH
Confidence 368999999999999999999875321 233445678889987421111 12 2335677777888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.|+.. ...|...+++||+..+.
T Consensus 158 ~g~~~~vLvvg~e~~s~~~~~~dr~~~~lfGDGAaA~vl~~~~~ 201 (365)
T 3gwa_A 158 TGAARCVLLLTADTYSKYLHPLDKSVRTLFGDGASATAVIAEHG 201 (365)
T ss_dssp TTSCSEEEEEEEECGGGGSCTTCHHHHTTBCCEEEEEEEEEECS
T ss_pred cCCCCEEEEEEEchhhccCCcccccccccccceeEEEEEEecCC
Confidence 76666665332 12444667888887653
No 87
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=92.13 E-value=0.81 Score=43.70 Aligned_cols=78 Identities=13% Similarity=0.038 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-... ......+.+.||+.+.-... .. +..+++++..+..+...++
T Consensus 72 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~-----~v-~~aC~s~~~al~~A~~~i~ 145 (345)
T 3s21_A 72 ATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTF-----DV-ANACLAFINGMDIAARMLE 145 (345)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEE-----EC-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEE-----eE-CCcCHHHHHHHHHHHHHHH
Confidence 3689999999999999999998754222 23355667889986421111 12 2245677777888888888
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..++.|+
T Consensus 146 ~g~~~~vLv 154 (345)
T 3s21_A 146 RGEIDYALV 154 (345)
T ss_dssp HTSCSEEEE
T ss_pred CCCCCEEEE
Confidence 766666653
No 88
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=91.98 E-value=0.27 Score=47.09 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc--------------ceeeEccCCchHHH-
Q 015003 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV--------------VCTTINKVCSSGMK- 104 (414)
Q Consensus 40 L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~--------------~~~~v~~aC~s~~~- 104 (414)
.+.+++.++|+|+|++|+|+|.++.|-... .+..+...+..++|++... +++.=.+||+.+..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q--~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v 285 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSG--VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVV 285 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHH--HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHH--HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHH
Confidence 344556899999999999999999863221 2334566777788876421 11112345554443
Q ss_pred HHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 105 AVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 105 al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
--..-...++.|+.+++|+++.-..-+
T Consensus 286 ~~~~~~~~~~~g~~~ril~~~tGalls 312 (347)
T 3lma_A 286 TFAHIFKEIEAGRLNRVLVVATGALLS 312 (347)
T ss_dssp HHHTHHHHHHTTSCSEEEEEEEEECCC
T ss_pred HHHHHHHHHhcCcccEEEEEecccccC
Confidence 334455689999999999998887655
No 89
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=91.43 E-value=0.75 Score=42.87 Aligned_cols=95 Identities=18% Similarity=0.076 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+.. .. ...+++++..+..+...++
T Consensus 54 ~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~~~------~v-~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 54 ATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAF------DI-SAACSGFIYALDIADSFIK 126 (309)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCEEE------EE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCceEE------ec-CccchHHHHHHHHHHHHHH
Confidence 368899999999999999998875322 22244566788998752211 12 2446788888888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 127 ~g~~~~vlv~g~e~~s~~~~~~~~~~~~~~gdGaaA~vL~~~~ 169 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSE 169 (309)
T ss_dssp TTSCSEEEEEEEEEGGGTCCTTCTTTTTTBCEEEEEEEEEECS
T ss_pred CCCCCEEEEEEecccccccCccchhhccccccccEEEEEEecC
Confidence 776666553321 123345678888765
No 90
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=91.42 E-value=0.53 Score=46.36 Aligned_cols=77 Identities=17% Similarity=0.156 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||.+.+-. ........+.+.||+.+.-.... ..+..+++|+..+..+...++.+
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~-----v~~~~Cagg~~AL~~A~~~i~ag 216 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLP-----ATQWACVAGTRSLALAADLVAAD 216 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCTTCEEEE-----ESSCGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCCCceEEE-----eeCCccHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999988532 23344566788999876311111 12444566676777777777776
Q ss_pred CCCeeE
Q 015003 381 KGKYGV 386 (414)
Q Consensus 381 ~~~~~l 386 (414)
..++.|
T Consensus 217 ~~~~vL 222 (413)
T 3v7i_A 217 PDRVVL 222 (413)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 666655
No 91
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=91.22 E-value=0.68 Score=45.23 Aligned_cols=94 Identities=21% Similarity=0.065 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccc-----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd-----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-. ........+.+.||+.. + ...+ +..+++++..+..+...++
T Consensus 121 a~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~-~------~~dv-~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 121 AVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGG-F------AFDM-NVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCS-E------EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCC-e------EEEE-CCccHHHHHHHHHHHHHHH
Confidence 36899999999999999999987532 22334455678899831 1 1112 3345566667777777788
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 193 ~g~~~~vLvvg~E~~S~~~d~~dr~t~~lFGDGA~A~vl~~~~ 235 (392)
T 3led_A 193 GGSVDAVLMVNPEICSGHLNFRDRDSHFIFGDVATAAIVERAD 235 (392)
T ss_dssp TTSCSEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEGG
T ss_pred CCCCCEEEEEeehhcCCcCCcCcccCCcccccccEEEEEEecC
Confidence 76666665332 2244456788888765
No 92
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=91.03 E-value=0.66 Score=50.77 Aligned_cols=97 Identities=20% Similarity=0.166 Sum_probs=64.7
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
..++++||+++|++++|||.+.+- .......-.+.+.||+........ .. +..+++|+..+..+...++.+
T Consensus 694 ~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~----~v-~~aCsg~~~Al~~A~~~i~sG 768 (979)
T 3tsy_A 694 KEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVM----LY-HQGCYAGGTVLRTAKDLAENN 768 (979)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE----EE-SCCTTHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEe----ee-ccccHhHHHHHHHHHHHHHhC
Confidence 358999999999999999998742 223334556688899865321010 01 234567777888888888877
Q ss_pred CCCeeEEeecc----------------------cccceeeEEEEEecc
Q 015003 381 KGKYGVGGICN----------------------GGGGASALVLELMQA 406 (414)
Q Consensus 381 ~~~~~l~~~~~----------------------~gg~~~a~vl~~~~~ 406 (414)
..++.|+...- .|...+++||+..+.
T Consensus 769 ~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~ 816 (979)
T 3tsy_A 769 AGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPD 816 (979)
T ss_dssp TTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred CCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCC
Confidence 77777654432 255667888887553
No 93
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=90.89 E-value=0.6 Score=45.34 Aligned_cols=70 Identities=23% Similarity=0.043 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.+++++||+++|++++|||++.+-.+ .......+.+.||+.+...... ..+...++|+..+..+...++.
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~-----v~~~~C~~~~~al~~A~~~i~a 159 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVL-----LHGIGASGGLAALRTAANLCLG 159 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEE-----ECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCeeEEE-----eeCchhhHHHHHHHHHHHHHHh
Confidence 57899999999999999999875332 3344566788999976431111 1123345556666666666664
No 94
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=89.78 E-value=1.2 Score=41.79 Aligned_cols=94 Identities=14% Similarity=0.006 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+ .-+. ... ...+++++..+..+...++
T Consensus 54 a~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~~------~~v-~~aCas~~~al~~A~~~i~ 125 (322)
T 1ub7_A 54 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAFA------YDL-LAGCPGWIYALAQAHALVE 125 (322)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCEE------EEE-ECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCEE------Eee-CccchHHHHHHHHHHHHHH
Confidence 368899999999999999997764221 22234566788998 3221 112 2345777888888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 126 ~g~~~~vlv~g~e~~s~~~~~~d~~~~~~~GdGA~A~vL~~~~ 168 (322)
T 1ub7_A 126 AGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVR 168 (322)
T ss_dssp TTSCSEEEEEEEECGGGTSCTTCHHHHTTBCCEEEEEEEECCC
T ss_pred cCCCCEEEEEEechhccccChhhcccceeeccccEEEEEEecC
Confidence 776666654332 233345678888764
No 95
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=89.77 E-value=1.2 Score=42.13 Aligned_cols=95 Identities=20% Similarity=0.061 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+..-+. ... ...+++++..+..+...++
T Consensus 65 a~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aC~s~~~al~~A~~~i~ 137 (335)
T 1u6e_A 65 ATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILG------FDL-SAGAAGFGYALGAAADMIR 137 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcE------eee-ccccHHHHHHHHHHHHHHH
Confidence 368899999999999999998875322 2233456678899852121 112 2345777778888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 138 ~g~~~~vLv~g~e~~s~~~~~~d~~~~~~~gDGA~A~vl~~~~ 180 (335)
T 1u6e_A 138 GGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGETP 180 (335)
T ss_dssp HTSCSSEEEEEEEECGGGCCTTCTTTTTTBCEEEEEEEEEECS
T ss_pred cCCCCEEEEEEEcccccccCccccccceEeccccEEEEEEecC
Confidence 776666554321 123345678888765
No 96
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=89.35 E-value=0.92 Score=45.35 Aligned_cols=77 Identities=22% Similarity=0.010 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh-
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH- 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~- 379 (414)
.+++++||+++|++++|||++.+-.+ .......+.+.||+.+...... ..+..+++|+..+..+...++.
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~d-----v~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVL-----LHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEE-----ECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEE-----ecCCcchHHHHHHHHHHHHHhcc
Confidence 57899999999999999999985432 3344566788999876431111 1123345555566666666653
Q ss_pred ---cCCCeeE
Q 015003 380 ---KKGKYGV 386 (414)
Q Consensus 380 ---~~~~~~l 386 (414)
+..++.|
T Consensus 190 ~~~G~~~~vL 199 (465)
T 3e1h_A 190 TARGKPARIL 199 (465)
T ss_dssp HHTTCCCEEE
T ss_pred cccCCCCEEE
Confidence 3345544
No 97
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=89.20 E-value=0.92 Score=44.15 Aligned_cols=77 Identities=22% Similarity=0.148 Sum_probs=52.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++.+-.+ .......+.+.||+.+... ... -+..+++++..+..+...++.
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~------~~~~C~~~~~al~~A~~~i~s 174 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTML------HLNGCFAGCAALRLAKDLAEN 174 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEE------ECCGGGHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeE------ECchhHHHHHHHHHHHHHHhc
Confidence 58999999999999999999975322 3334556788899876321 111 134455666677777777776
Q ss_pred cCCCeeEE
Q 015003 380 KKGKYGVG 387 (414)
Q Consensus 380 ~~~~~~l~ 387 (414)
+..++.|+
T Consensus 175 g~~~~vLv 182 (387)
T 3oit_A 175 SRGARVLV 182 (387)
T ss_dssp STTCEEEE
T ss_pred CCCCEEEE
Confidence 66666553
No 98
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=89.06 E-value=1 Score=43.97 Aligned_cols=76 Identities=20% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++.+-. ........+.+.||+.+... ... + +..+++++..+..+...++.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~-----v-~~~C~g~~~al~~A~~~i~s 180 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMI-----Y-SQACHMGAAMLRIAKDLAEN 180 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEE-----E-SCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeE-----E-cCccHHHHHHHHHHHHHHHc
Confidence 5899999999999999999987532 23344556788999876431 111 1 23345666667777777776
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 181 g~~~~vL 187 (393)
T 3ov2_A 181 NRGARVL 187 (393)
T ss_dssp STTCEEE
T ss_pred CCCCEEE
Confidence 6666655
No 99
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=89.01 E-value=0.97 Score=43.51 Aligned_cols=95 Identities=23% Similarity=0.117 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+ . ... +..+++++..+..+...++
T Consensus 78 a~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~----~~v-~~aC~s~~~Al~~A~~~i~ 150 (359)
T 3h78_A 78 MVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIP--V----LDI-RAQASGLLYGLQMARGQIL 150 (359)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCC--E----EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCc--E----EEE-CCHhHHHHHHHHHHHHHHH
Confidence 368999999999999999999885322 233456678899985322 1 112 2345666777777777787
Q ss_pred hcCCCeeEEee------------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI------------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~------------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 151 sG~~~~vLvvg~e~~S~~~~~~d~~~~t~~lfGDGAaA~vl~~~~ 195 (359)
T 3h78_A 151 AGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGE 195 (359)
T ss_dssp TTSCSEEEEEEEEECGGGCCCSTTTHHHHTTBCEEEEEEEEECCS
T ss_pred CCCcCEEEEEEEchhcccCCcccccccccceecceeEEEEEEecC
Confidence 66566655322 1134456788888654
No 100
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=88.99 E-value=0.57 Score=46.73 Aligned_cols=132 Identities=11% Similarity=0.087 Sum_probs=70.5
Q ss_pred EEeCHHHHHHcCCcceEEEEEEEEee--c-CCC-ccccchHHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHH
Q 015003 269 VLVSGVKALELGLQVIAKIRGFADAA--Q-APE-WFTTAPSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQ 339 (414)
Q Consensus 269 vL~s~~~a~~~~~~~~~~i~g~~~~~--~-~~~-~~~~~~~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~ 339 (414)
+|.+.+.++..+..+.....|.+... . .+. ....-..++++++|+++|++++|||++.+- +.+......+.
T Consensus 19 ~v~n~el~~~~g~~~~~~~~Gig~r~~~va~~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~ 98 (460)
T 2v4w_A 19 YVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLM 98 (460)
T ss_dssp EEEHHHHHHHTTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHG
T ss_pred EecHHHHHHHhCCCHHHeeeeeeeEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHH
Confidence 45666666555544322223333322 1 111 111123689999999999999999999843 23344455567
Q ss_pred HHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--CCeeEEeec------------ccccceeeEEEEEe
Q 015003 340 KLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--GKYGVGGIC------------NGGGGASALVLELM 404 (414)
Q Consensus 340 e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--~~~~l~~~~------------~~gg~~~a~vl~~~ 404 (414)
+.||+.. ..+... -+ ....++|+..+..+...++.+. +++.|+... ..|...+++||+..
T Consensus 99 ~~LGl~g~~~~~a~----Dv-~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s~~~~~~r~t~GDGA~A~ll~~~ 173 (460)
T 2v4w_A 99 ELFQDSGNTDIEGI----DT-TNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPK 173 (460)
T ss_dssp GGTGGGTCCCCBCC----EE-ESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEECCCSSTTGGGCEEEEEEEEEESS
T ss_pred HHhCCCCCCCcEEE----Ee-cchhHHHHHHHHHHHHHHHhCCccCCEEEEEecccccccCCCCCcccccceeEEEeecC
Confidence 8899832 112111 11 1223344455556666666554 366664331 12445567888754
Q ss_pred c
Q 015003 405 Q 405 (414)
Q Consensus 405 ~ 405 (414)
.
T Consensus 174 ~ 174 (460)
T 2v4w_A 174 A 174 (460)
T ss_dssp C
T ss_pred C
Confidence 3
No 101
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=88.74 E-value=1 Score=44.07 Aligned_cols=75 Identities=24% Similarity=0.219 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCC--cCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||++.+-.. .......+.+.||+...- ... . +..+++++..+..+...++
T Consensus 112 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aCss~~~al~~A~~~i~ 184 (402)
T 1ee0_A 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYML------Y-QQGAAAGGTVLRLAKDLAE 184 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTTCEEEEE------C-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCCcceeeE------E-CchhHHHHHHHHHHHHHHH
Confidence 58899999999999999999875332 333456678889986531 111 1 2344667777777777787
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
.+..++.|
T Consensus 185 ~g~~~~vL 192 (402)
T 1ee0_A 185 NNKGSRVL 192 (402)
T ss_dssp HSTTCCEE
T ss_pred cCCCCEEE
Confidence 76665554
No 102
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=88.47 E-value=0.93 Score=42.86 Aligned_cols=83 Identities=18% Similarity=0.117 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE----ccCCchHHHHHHHHHHHHH
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v----~~aC~s~~~al~~A~~~I~ 114 (414)
+...++++++|+++|++++|||.++.- ..+......+...||+++.....++ +..++|...+|..+ ++
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H-----~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~ 295 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPH-----QANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---LR 295 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC-----CCCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc-----CCCHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---HH
Confidence 456778999999999999999998762 1122344567888998643222222 23444545455443 45
Q ss_pred cCC---CCeEEEEecccC
Q 015003 115 LGI---NDIVVAGGMESM 129 (414)
Q Consensus 115 sG~---~~~vLv~g~e~~ 129 (414)
.|. -|.+|++++...
T Consensus 296 ~~~~~~G~~vll~~~G~G 313 (331)
T 2x3e_A 296 QGILRDGGNMVLTGFGAG 313 (331)
T ss_dssp TTCSCTTCEEEEEEEETT
T ss_pred hCCCCCCCEEEEEEEeHH
Confidence 553 378888877653
No 103
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=87.64 E-value=1.6 Score=40.91 Aligned_cols=95 Identities=23% Similarity=0.176 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .....-.+...||+...+. ... ...+++++..+..+...++
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~al~~A~~~i~ 127 (317)
T 1hnj_A 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPA------FDV-AAACAGFTYALSVADQYVK 127 (317)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSCE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCeE------Eee-CcccHHHHHHHHHHHHHHH
Confidence 368899999999999999998764321 2234455678899863221 223 3456788888888888898
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|-..+++||+..+
T Consensus 128 ~g~~~~vlv~g~e~~s~~~~~~d~~~~~~~GdGA~A~vL~~~~ 170 (317)
T 1hnj_A 128 SGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASE 170 (317)
T ss_dssp TTSCSEEEEEEEECHHHHSCTTCHHHHTTBCCEEEEEEEEEES
T ss_pred CCCCCEEEEEEechhcccCCchhcccceeeccccEEEEEEecC
Confidence 776666553321 223344678888764
No 104
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=87.39 E-value=1.4 Score=43.10 Aligned_cols=75 Identities=24% Similarity=0.222 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCC--cCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+-.. +......+.+.||+.... ... . +..+++++..+..+...++
T Consensus 120 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~s~~~al~~A~~~i~ 192 (402)
T 3awk_A 120 KEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPTVKRVML------Y-QQGAYAGATVLRVAKDLAE 192 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTTCEEEEE------E-SCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCccceeeE------E-CCccHHHHHHHHHHHHHHH
Confidence 58899999999999999998875322 333456678889986531 111 1 2344667777777777787
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
.+..++.|
T Consensus 193 sg~~~~vL 200 (402)
T 3awk_A 193 NNKGARVL 200 (402)
T ss_dssp TSTTCEEE
T ss_pred cCCCCEEE
Confidence 66555554
No 105
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=87.36 E-value=1.6 Score=42.26 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||.+.+-.. +......+.+.||+.......+ .....+++++..+..+...++.+
T Consensus 89 ~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~-----v~~~aCss~~~Al~~A~~~i~~g 163 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIP-----IAQLGCAAGGAAINRAHDFCTAY 163 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEE-----ECSCGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEE-----ccCCcCHHHHHHHHHHHHHHHcC
Confidence 57899999999999999999875322 2334456688899865211111 11344567777888888888877
Q ss_pred CCCeeE
Q 015003 381 KGKYGV 386 (414)
Q Consensus 381 ~~~~~l 386 (414)
..++.|
T Consensus 164 ~~~~vL 169 (382)
T 1u0m_A 164 PEANAL 169 (382)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 666655
No 106
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=87.13 E-value=1.8 Score=42.04 Aligned_cols=78 Identities=21% Similarity=0.236 Sum_probs=55.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-... ......+...+|+++.... ... +..++|++..+..+...++.
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~-----~~v-~~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPS-----YTV-NKLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCE-----EEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceE-----EEc-cccchHHHHHHHHHHHHHhC
Confidence 689999999999999999998764321 2234456778898642111 111 45678888899999999997
Q ss_pred cCCCeeEEe
Q 015003 380 KKGKYGVGG 388 (414)
Q Consensus 380 ~~~~~~l~~ 388 (414)
+..+..|+.
T Consensus 108 G~~~~vlv~ 116 (395)
T 4e1l_A 108 GENDVVIAG 116 (395)
T ss_dssp TSCSEEEEE
T ss_pred CCCCEEEEE
Confidence 777766653
No 107
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=86.98 E-value=1.3 Score=43.01 Aligned_cols=75 Identities=24% Similarity=0.181 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCC--cCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||++.+-. ........+.+.||+...- ... . +..+++++..+..+...++
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~s~~~al~~A~~~i~ 175 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMF------Y-HLGCYAGGTVLRLAKDIAE 175 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEE------E-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeee------E-ccccHHHHHHHHHHHHHHH
Confidence 5889999999999999999887532 2333456678889986531 111 1 2334666777777777787
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
.+..++.|
T Consensus 176 ~g~~~~vL 183 (387)
T 3a5r_A 176 NNKGARVL 183 (387)
T ss_dssp HSTTCEEE
T ss_pred hCCCCEEE
Confidence 76666555
No 108
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=86.87 E-value=1.5 Score=40.89 Aligned_cols=95 Identities=22% Similarity=0.136 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+. ... +..+++++..+..+...++
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~al~~A~~~i~ 127 (313)
T 1zow_A 55 AYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVAS------MDQ-LAACSGFMYSMITAKQYVQ 127 (313)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCCE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcE------EEE-CCcCHHHHHHHHHHHHHHH
Confidence 368899999999999999998764322 1223456678899864221 112 3446788888888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 128 ~g~~~~vLv~g~e~~s~~~~~~d~~~~~~~gdGa~A~vl~~~~ 170 (313)
T 1zow_A 128 SGDYHNILVVGADKLSKITDLTDRSTAVLFGDGAGAVIIGEVS 170 (313)
T ss_dssp TTSCSCEEEEEEEEGGGTCCTTCHHHHTTBCEEEEEEEEEECS
T ss_pred CCCCCEEEEEEEcccccccCcccccceeeeccceEEEEEEecC
Confidence 776666553321 123345678888765
No 109
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=86.69 E-value=1.2 Score=43.59 Aligned_cols=76 Identities=21% Similarity=0.193 Sum_probs=50.9
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-.+ +......+.+.||+...-. ..+ . +..+++++..+..+...++.
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v-~~aCas~~~AL~~A~~~i~~ 203 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGV-----F-QHGCFAGGTVLRMAKDLAEN 203 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEE-----E-SCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhce-----e-cCccHHHHHHHHHHHHHHHc
Confidence 57899999999999999998874322 3334456788899865310 111 1 23346667777777777877
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 204 G~~~~vL 210 (413)
T 1xes_A 204 NRGARVL 210 (413)
T ss_dssp STTCCEE
T ss_pred CCCCEEE
Confidence 6666555
No 110
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=86.65 E-value=1.5 Score=42.46 Aligned_cols=76 Identities=22% Similarity=0.180 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-.. .......+.+.||+..... ... . +..+++++..+..+...++.
T Consensus 107 ~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v-~~aC~~~~~al~~A~~~i~~ 180 (389)
T 1i88_A 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM-----Y-QQGAFAGGTVLRLAKDLAEN 180 (389)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE-----E-SCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCCchhhee-----E-CCccHHHHHHHHHHHHHHHc
Confidence 57899999999999999999875322 3334556788899865310 111 1 23346667777777777887
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 181 g~~~~vL 187 (389)
T 1i88_A 181 NKGARVL 187 (389)
T ss_dssp STTCEEE
T ss_pred CCCCEEE
Confidence 6666554
No 111
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=86.17 E-value=1.7 Score=42.47 Aligned_cols=76 Identities=18% Similarity=0.171 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-.. +......+.+.||+..... ... . +..+++++..+..+...++.
T Consensus 120 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v-~~aC~s~~~al~~A~~~i~~ 193 (406)
T 2d3m_A 120 TEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYCI-----Y-MQGAYAGGTVMRYAKDLAEN 193 (406)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEE-----E-SCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCCcceeee-----E-cCccHHHHHHHHHHHHHHHc
Confidence 57899999999999999999875332 3334566788899865310 111 1 33456677777778778887
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 194 g~~~~vL 200 (406)
T 2d3m_A 194 NRGARVL 200 (406)
T ss_dssp STTCEEE
T ss_pred CCCCEEE
Confidence 6555554
No 112
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=86.14 E-value=1.7 Score=42.64 Aligned_cols=76 Identities=22% Similarity=0.217 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-.. .......+.+.||+..... ... . +..+++++..+..+...++.
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~~~~~~~-----v-~~aCas~~~AL~~A~~~i~s 198 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMM-----Y-QQGAFAGATVLRVAKDLAEN 198 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTCEEEEE-----E-SCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCCcceEeE-----E-CCccHHHHHHHHHHHHHHHh
Confidence 58899999999999999999885322 3334556788899865210 111 1 23346667777777777776
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 199 g~~~~vL 205 (413)
T 2p0u_A 199 NAGARVL 205 (413)
T ss_dssp STTCEEE
T ss_pred CCCCEEE
Confidence 6555554
No 113
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=86.05 E-value=2.4 Score=41.29 Aligned_cols=78 Identities=17% Similarity=0.128 Sum_probs=55.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+.... ......+...||+++.... ... +..+++++..+..+...++.
T Consensus 36 ~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~-----~~v-~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 36 VTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPA-----MTI-NIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCE-----EEE-CCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceE-----EEe-ccccHHHHHHHHHHHHHHhc
Confidence 689999999999999999998864321 2334456788898642111 112 44567888889999999998
Q ss_pred cCCCeeEEe
Q 015003 380 KKGKYGVGG 388 (414)
Q Consensus 380 ~~~~~~l~~ 388 (414)
+..+..|+.
T Consensus 110 G~~~~vLv~ 118 (396)
T 4dd5_A 110 GDADIMLVG 118 (396)
T ss_dssp TSCSEEEEE
T ss_pred CCCCEEEEE
Confidence 777766653
No 114
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=85.99 E-value=1.7 Score=41.77 Aligned_cols=77 Identities=17% Similarity=0.079 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||.+.+-. ........+.+.||+.......+ .....+++++..+..+...++.+
T Consensus 100 ~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~-----v~~~aCss~~~al~~A~~~i~~g 174 (374)
T 2h84_A 100 QQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVS-----LNLMGCLAGLSSLRTAASLAKAS 174 (374)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE-----EESCGGGHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEE-----ecCCcCHHHHHHHHHHHHHHHcC
Confidence 5789999999999999999987432 22233456678899865211111 11134567777788888888877
Q ss_pred CCCeeE
Q 015003 381 KGKYGV 386 (414)
Q Consensus 381 ~~~~~l 386 (414)
..++.|
T Consensus 175 ~~~~vL 180 (374)
T 2h84_A 175 PRNRIL 180 (374)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 666655
No 115
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=85.59 E-value=4 Score=39.98 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=52.7
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch-----hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~-----~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-.... .........+|++..-. .... +..++|++..+..+...++.
T Consensus 60 ~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p-----~~~v-~~aCss~~~Al~~A~~~I~~ 133 (418)
T 2iik_A 60 SAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVP-----LSTV-NRQCSSGLQAVASIAGGIRN 133 (418)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC-----EEEE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCce-----EEEe-CCCCHHHHHHHHHHHHHHHC
Confidence 5889999999999999999887543221 22333446688842111 1112 44578888899999999998
Q ss_pred cCCCeeEEe
Q 015003 380 KKGKYGVGG 388 (414)
Q Consensus 380 ~~~~~~l~~ 388 (414)
+..+..|+.
T Consensus 134 G~~d~vLv~ 142 (418)
T 2iik_A 134 GSYDIGMAC 142 (418)
T ss_dssp TSCSEEEEE
T ss_pred CCCCEEEEe
Confidence 777766543
No 116
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=85.59 E-value=2.1 Score=42.42 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccc-----cchhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd-----~~~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
...+++++|+++|++++|||.+.+.. .+......+.+.||+.. ..+.. ..+ ...+++|+..+..+...+
T Consensus 56 a~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~----~~v-~~aC~gg~~AL~~A~~~I 130 (450)
T 2f82_A 56 SFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEG----VDS-TNACYGGTAALLNCVNWV 130 (450)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBC----CEE-CSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceE----EEh-hhhhHHHHHHHHHHHHHH
Confidence 36889999999999999999998532 23344555677888721 11211 112 234566677777777777
Q ss_pred HhcCC--CeeEEeec------------ccccceeeEEEEEec
Q 015003 378 RHKKG--KYGVGGIC------------NGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~~~~--~~~l~~~~------------~~gg~~~a~vl~~~~ 405 (414)
+.+.. ++.|+... ..|...+++||+..+
T Consensus 131 ~sg~~~~~~vLVvg~e~~~~~~~~~~~~fGDGA~A~ll~~~~ 172 (450)
T 2f82_A 131 ESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDA 172 (450)
T ss_dssp HSTTCCSCEEEEEEEEEECCSSSTTGGGCEEEEEEEEEESSC
T ss_pred HcCCCcCCeEEEEEeeeccccCCCCCcccccceEEEEeccCC
Confidence 76653 66654331 233345678887544
No 117
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=85.40 E-value=1.7 Score=41.73 Aligned_cols=76 Identities=9% Similarity=-0.041 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc------chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA------FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~------~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||++.+-.. .......+.+.||+...+. ..+ +..+++++..+..+...+
T Consensus 58 a~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~~------~~v-~~aC~~~~~al~~A~~~i 130 (357)
T 3s3l_A 58 AARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPA------FGL-AQRCNGGMGAIELAGAYL 130 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSCE------EEE-ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCcE------EEE-cCccHHHHHHHHHHHHHH
Confidence 368999999999999999999975432 1123455678889843121 112 233456666777777777
Q ss_pred HhcCCC--eeE
Q 015003 378 RHKKGK--YGV 386 (414)
Q Consensus 378 ~~~~~~--~~l 386 (414)
+.+..+ +.|
T Consensus 131 ~sg~~~~~~vL 141 (357)
T 3s3l_A 131 GSGIGAGHAAL 141 (357)
T ss_dssp HTTSSSSSEEE
T ss_pred HcCCCCCCEEE
Confidence 766666 655
No 118
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=85.32 E-value=1.7 Score=41.11 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+...||+..-+. ... ...+++++..+..+...++
T Consensus 64 a~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~Al~~A~~~i~ 136 (339)
T 1mzj_A 64 GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAGG------FDL-SAACAGFCHALSIAADAVE 136 (339)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCccE------EEc-cccchHHHHHHHHHHHHHH
Confidence 368899999999999999997764321 2223456678899864221 112 2345777778888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. +..|-..+++||+..+
T Consensus 137 ~G~~~~vLv~g~e~~s~~~~~~d~~~~~~~GdGA~A~vL~~~~ 179 (339)
T 1mzj_A 137 SGGSRHVLVVATERMTDVIDLADRSLSFLFGDGAGAAVVGPSD 179 (339)
T ss_dssp HSSCSCEEEEEEEEGGGGSCSSCTTTTTTBCEEEEEEEEEEES
T ss_pred CCCCCEEEEEEEcccccccCccccccceEeccCceEEEEEecC
Confidence 77666655322 1223344678888764
No 119
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=84.12 E-value=1.5 Score=42.69 Aligned_cols=75 Identities=20% Similarity=0.140 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCC--cCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..+++++|+++|++++|||.+.+-.. .......+.+.||+.... +.+ ....+++|+..+..+...++
T Consensus 118 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v-------~~~aCas~~~Al~~A~~~i~ 190 (393)
T 1ted_A 118 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVV-------NFMGCAAAMNALGTATNYVR 190 (393)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE-------ESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEe-------ccchhHHHHHHHHHHHHHHH
Confidence 57899999999999999999874322 233345667889986531 111 13345677778888888888
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
.+..++.|
T Consensus 191 ~G~~~~vL 198 (393)
T 1ted_A 191 AHPAMKAL 198 (393)
T ss_dssp HSTTCEEE
T ss_pred cCCCCEEE
Confidence 77666554
No 120
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=83.40 E-value=2.6 Score=40.99 Aligned_cols=77 Identities=12% Similarity=0.106 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-... ......+...+|++...... .=+..++|++..+..+...++.
T Consensus 34 ~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~------~v~~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 34 VPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGY------TIQRQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEE------EEECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEE------EecCcchHHHHHHHHHHHHHhC
Confidence 689999999999999999998754322 22344557778986421111 1145567888889899999988
Q ss_pred cCCCeeEE
Q 015003 380 KKGKYGVG 387 (414)
Q Consensus 380 ~~~~~~l~ 387 (414)
+..+..|+
T Consensus 108 G~~~~vlv 115 (394)
T 3ss6_A 108 GVSEVVVA 115 (394)
T ss_dssp TSCSEEEE
T ss_pred CCCCEEEE
Confidence 77776665
No 121
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=83.16 E-value=2.7 Score=42.05 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
...+++++|+++|++++|||++.+... .......+.+.|+... ..+... .+ ....++|+..+..+...+
T Consensus 77 a~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~----dv-~~aC~gg~~AL~~A~~~i 151 (478)
T 2p8u_A 77 CMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGI----DT-TNACYGGTAAVFNAVNWI 151 (478)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCBCC----EE-ESGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCceEE----EE-cchhHHHHHHHHHHHHHH
Confidence 368999999999999999999985422 2333344444444321 112111 12 123455566666676777
Q ss_pred HhcC--CCeeEEee------------cccccceeeEEEEEec
Q 015003 378 RHKK--GKYGVGGI------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~~~--~~~~l~~~------------~~~gg~~~a~vl~~~~ 405 (414)
+.+. .++.|+.. ..+|...+|+||+..+
T Consensus 152 ~sg~~~~~~aLVV~~Eia~~~~~~~~~~fGdGA~A~Ll~~~~ 193 (478)
T 2p8u_A 152 ESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNA 193 (478)
T ss_dssp TSTTCCSCEEEEEEEEEECCCSSTTGGGCEEEEEEEEEESSC
T ss_pred HcCCccCCEEEEEEeeeecccCCCCCCcccceeEEEEEecCC
Confidence 7666 66666443 2233355677886543
No 122
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=80.99 E-value=4.9 Score=39.75 Aligned_cols=78 Identities=10% Similarity=0.158 Sum_probs=53.2
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch------hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS------VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~------~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+-.... .....+...||++.... .... +..++||+..+..+...++
T Consensus 60 ~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p-----~~~v-~~aCaSg~~Al~~A~~~I~ 133 (442)
T 2wu9_A 60 APVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVA-----VRTV-NRQCSSGLQAVADVAAAIK 133 (442)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSC-----EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCce-----EEEe-CCcCHHHHHHHHHHHHHHH
Confidence 5789999999999999999877543322 22344567789842111 1112 3456788889999999999
Q ss_pred hcCCCeeEEe
Q 015003 379 HKKGKYGVGG 388 (414)
Q Consensus 379 ~~~~~~~l~~ 388 (414)
.+..+..|+.
T Consensus 134 sG~~d~vLvg 143 (442)
T 2wu9_A 134 AGFYDIGIGA 143 (442)
T ss_dssp TTSCSEEEEE
T ss_pred CCCCCEEEEE
Confidence 7766665543
No 123
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=80.77 E-value=5.1 Score=38.78 Aligned_cols=78 Identities=14% Similarity=0.032 Sum_probs=53.4
Q ss_pred HHHHHHHHHHc-CCCCCCCceeecccc------chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANA-GLEASQIDYYEINEA------FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~a-Gl~~~DId~~~~hd~------~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
.++++++|+++ |++++|||.+.+-.. .......+...+|++..... .. =+..++|++..+..+...+
T Consensus 32 ~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~-----~~-v~~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 32 AHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPA-----VT-VNRLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCC-----EE-EECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcE-----eE-ecCcchHHHHHHHHHHHHH
Confidence 68999999999 999999998875322 22334445667887532111 11 1455678888899999999
Q ss_pred HhcCCCeeEEe
Q 015003 378 RHKKGKYGVGG 388 (414)
Q Consensus 378 ~~~~~~~~l~~ 388 (414)
+.+..+..|+.
T Consensus 106 ~sG~~d~vLv~ 116 (387)
T 3goa_A 106 MTGDAQVCLVG 116 (387)
T ss_dssp HTTSCSEEEEE
T ss_pred hCCCCCEEEEE
Confidence 97777766653
No 124
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=80.04 E-value=13 Score=36.13 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCCCCCc----eeeccccc------------------------h-------hHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQID----YYEINEAF------------------------S-------VVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId----~~~~hd~~------------------------~-------~~~~~~~e~lGl~~~~v 349 (414)
.+++++||+.||++++||| .+.+-... . ...-.+...||+....+
T Consensus 79 l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 158 (413)
T 3o04_A 79 IASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINS 158 (413)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcce
Confidence 5789999999999999998 55432211 0 01223455667654222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
.+ ...++|++..+..+...|+.+..+..|+.
T Consensus 159 ~v--------~~aCss~~~Al~~A~~~I~~G~~d~~lvg 189 (413)
T 3o04_A 159 TT--------VTACATATNSIGDAFKVIERGDADAMITG 189 (413)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred ee--------cchhHHHHHHHHHHHHHHHcCCCCEEEEe
Confidence 22 34568888899999999998776666543
No 125
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=79.86 E-value=4 Score=39.65 Aligned_cols=77 Identities=18% Similarity=0.187 Sum_probs=53.8
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc------chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA------FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~------~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+-.. .......+...||++..... ... +..++||+..+..+...++
T Consensus 31 ~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~-----~~v-~~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 31 AHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG-----CTV-NRLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEE-----EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccE-----eec-cccchHHHHHHHHHHHHHH
Confidence 57899999999999999998875322 23345556788998532111 112 3456788889999999999
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..|+
T Consensus 105 ~G~~d~vLv 113 (401)
T 1ulq_A 105 AGEGKVYIG 113 (401)
T ss_dssp TTSCSEEEE
T ss_pred CCCCCEEEE
Confidence 776666554
No 126
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=79.56 E-value=3.7 Score=34.01 Aligned_cols=59 Identities=15% Similarity=0.018 Sum_probs=40.9
Q ss_pred EEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCC
Q 015003 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (414)
Q Consensus 16 ~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~ 87 (414)
.++|+|+ +++ ...+...++++++|+++|+.+.+|+.+.....-. .-..-..++..+|++
T Consensus 12 lvvGIGc-----rrg-----~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~---dE~gL~~~A~~lg~p 70 (145)
T 2w6k_A 12 LIAGIGC-----RRG-----CSAEHLRALLERTLGEHGRSLAELDALASIDGKR---DEPGLRQLATLLERP 70 (145)
T ss_dssp EEEEEEE-----CTT-----CCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSS---CCHHHHHHHHHHTSC
T ss_pred EEEEEee-----CCC-----CCHHHHHHHHHHHHHHcCCCHHHcceEechHHhC---CCHHHHHHHHHhCCC
Confidence 7889986 333 3445577889999999999999998886642221 222334677788874
No 127
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=75.95 E-value=1.9 Score=38.69 Aligned_cols=57 Identities=18% Similarity=0.114 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCc----HHHHHHHHCCCCCCcceeeEc
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA----PARQAALGAGIPNSVVCTTIN 96 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~----~a~~va~~lgl~~~~~~~~v~ 96 (414)
.-.+.....++++|+++|++++|||.|.++..-+.+.+-- .+.-++..+ ++|.+.|+
T Consensus 33 ~h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~~~----~~Pl~~V~ 93 (231)
T 2gel_A 33 EHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGA----NLPMIGVS 93 (231)
T ss_dssp CCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTT----TCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHc----CCCEEEec
Confidence 4446678889999999999999999999986655443222 233333333 45666555
No 128
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=75.85 E-value=5.4 Score=38.59 Aligned_cols=78 Identities=17% Similarity=0.200 Sum_probs=54.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-... ......+...+|+.+.-.. ... +..++||+..+..+...++.
T Consensus 32 ~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~-----~~v-~~aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 32 ATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATA-----WGM-NQLCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEE-----EEE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceE-----EEe-cccchHHHHHHHHHHHHHHC
Confidence 588999999999999999987653221 2234556778898642111 111 34568899999999999998
Q ss_pred cCCCeeEEe
Q 015003 380 KKGKYGVGG 388 (414)
Q Consensus 380 ~~~~~~l~~ 388 (414)
+..+..|+.
T Consensus 106 G~~d~vlvg 114 (392)
T 2vu1_A 106 GDASIIVAG 114 (392)
T ss_dssp TSCSCEEEE
T ss_pred CCCCEEEEE
Confidence 776765543
No 129
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=75.53 E-value=3.6 Score=41.62 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCCceee----ccccc-------------hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYE----INEAF-------------SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~----~hd~~-------------~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~ 367 (414)
..+++.+|+++|++++|||-+. ..+.+ ......+.+.||+.+.+... -+..|+||.
T Consensus 47 a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~~~~~~~-------~~~~caSg~ 119 (520)
T 4egv_A 47 TEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGADPAHAVL-------EVIGGQSPQ 119 (520)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCCCSEEEE-------CCSSTTHHH
T ss_pred HHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCCCceEEE-------ecCCCHHHH
Confidence 6899999999999999987432 11111 11234457788987643221 244578999
Q ss_pred HHHHHHHHHHHhcCCCeeEE
Q 015003 368 RILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 368 ~~l~~~~~ql~~~~~~~~l~ 387 (414)
..+..+...++.+..+..|+
T Consensus 120 ~av~~AA~aI~aG~advvlA 139 (520)
T 4egv_A 120 HLATEFGGKIAAGENDVVLI 139 (520)
T ss_dssp HHHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEE
Confidence 99999999999776665443
No 130
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=75.37 E-value=7.9 Score=37.50 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=53.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-... ......+...+|++.. +..... ...++||+..+..+...++.
T Consensus 35 ~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~-----~p~~~v-~~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 35 STVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYS-----VPAWSC-QMICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTT-----SCEEEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCC-----ccEEEe-cCcChhHHHHHHHHHHHHHC
Confidence 578999999999999999987754322 2234455777888421 111112 34578999999999999998
Q ss_pred cCCCeeEE
Q 015003 380 KKGKYGVG 387 (414)
Q Consensus 380 ~~~~~~l~ 387 (414)
+..+..|+
T Consensus 109 G~~d~vla 116 (397)
T 1wl4_A 109 GDSSIVVA 116 (397)
T ss_dssp TSCSEEEE
T ss_pred CCCCEEEE
Confidence 77666554
No 131
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=75.22 E-value=2.6 Score=41.26 Aligned_cols=77 Identities=13% Similarity=0.047 Sum_probs=49.5
Q ss_pred HHHHHHHHHH-cCCCCCCCceeeccccc------hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIAN-AGLEASQIDYYEINEAF------SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~-aGl~~~DId~~~~hd~~------~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
.++++++|++ +|++++|||.+.+.... ......+...+|++......+ . +..++|++..+..+...+
T Consensus 37 ~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~-----v-~~~Css~~~Al~~A~~~I 110 (407)
T 3svk_A 37 VGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQ-----L-NRFCASGLEAVNTAAQKV 110 (407)
T ss_dssp HHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEE-----E-C---CBSCCHHHHHHHHH
T ss_pred HHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEE-----e-cCcChhHHHHHHHHHHHH
Confidence 6899999999 99999999998764332 122345677899854211111 1 344566666778888888
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 111 ~sG~~d~vLv 120 (407)
T 3svk_A 111 RSGWDDLVLA 120 (407)
T ss_dssp HHTSCCEEEE
T ss_pred HcCCCCEEEE
Confidence 8776666554
No 132
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=74.82 E-value=4.5 Score=40.16 Aligned_cols=42 Identities=10% Similarity=0.048 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeec-----cccchhHHHHHHHHcCCC
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEI-----NEAFSVVAIANQKLLGLD 345 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~-----hd~~~~~~~~~~e~lGl~ 345 (414)
...+++++|+++|++++|||++.+ -+.+....-.+.+.||+.
T Consensus 58 a~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~ 104 (460)
T 2wya_A 58 CLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDS 104 (460)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGG
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhcc
Confidence 368999999999999999999874 244444455556667653
No 133
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=72.86 E-value=1.8 Score=38.40 Aligned_cols=57 Identities=21% Similarity=0.167 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCC----cHHHHHHHHCCCCCCcceeeEc
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ----APARQAALGAGIPNSVVCTTIN 96 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~----~~a~~va~~lgl~~~~~~~~v~ 96 (414)
.-.+.....++++|+++|++++|||.|.++..-+.+.+- ..+.-++..++ +|.+.|+
T Consensus 34 ~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~----iPl~gVs 94 (213)
T 3r6m_A 34 DHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAE----LPMIGVS 94 (213)
T ss_dssp CCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTT----CCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhC----CCEEEEc
Confidence 344566688999999999999999999998776654322 23444555554 4666554
No 134
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=71.58 E-value=9.5 Score=36.82 Aligned_cols=98 Identities=16% Similarity=0.126 Sum_probs=61.0
Q ss_pred EEEEEEEEeecCCCc-------cccchHHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCC
Q 015003 285 AKIRGFADAAQAPEW-------FTTAPSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAH 352 (414)
Q Consensus 285 ~~i~g~~~~~~~~~~-------~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~ 352 (414)
+.|.|.+.+.-.... ...-..++++++|+++|++++|||.+.+-... ....-.+...+|++..-.
T Consensus 10 v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p--- 86 (395)
T 2ib8_A 10 VVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTP--- 86 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCC---
T ss_pred eEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCce---
Confidence 577777654322111 11123578999999999999999987643221 123344566788742111
Q ss_pred CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 353 GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 353 Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
.... ...++||+..+..+...++.+..+..|+.
T Consensus 87 --~~~v-~~aCaS~~~Al~~A~~~I~~G~~d~vlvg 119 (395)
T 2ib8_A 87 --CTTI-NKVCASGMKAIMMASQSLMCGHQDVMVAG 119 (395)
T ss_dssp --EEEE-ECGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred --EEEe-cccccHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 1112 34568889899999999998777766543
No 135
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=71.17 E-value=18 Score=35.12 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcCCCCCCCc----eeeccccch-------------------------------hHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQID----YYEINEAFS-------------------------------VVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId----~~~~hd~~~-------------------------------~~~~~~~e~lGl~~~~v 349 (414)
.++++++|+++|++++||| .+.+..... ...-.+...||+....+
T Consensus 82 l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 161 (416)
T 1e5m_A 82 VCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNN 161 (416)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCcee
Confidence 5789999999999999998 343322211 12233455677654222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
.+ ...++|++..+..+...|+.+..+..|+
T Consensus 162 ~v--------~~aCsS~l~Al~~A~~~I~~G~~d~~Lv 191 (416)
T 1e5m_A 162 CT--------VTACAAGSNAIGDAFRLVQNGYAKAMIC 191 (416)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTSCSEEEE
T ss_pred Cc--------cchhHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 22 3456888989999999999876665543
No 136
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=70.83 E-value=1.9 Score=38.46 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCc----HHHHHHHHCCCCCCcceeeEc
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA----PARQAALGAGIPNSVVCTTIN 96 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~----~a~~va~~lgl~~~~~~~~v~ 96 (414)
..-.+.....++++|+++|++++|||.|.++..-+.+.+-- .+.-++..+ ++|.+.|+
T Consensus 43 r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~----~iPl~gVs 104 (218)
T 2a6a_A 43 KKHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPY----DIPVAPLN 104 (218)
T ss_dssp GGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGG----TCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHc----CCCEEEeC
Confidence 34557777889999999999999999999986665443322 233344444 35677665
No 137
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=70.51 E-value=18 Score=35.45 Aligned_cols=76 Identities=12% Similarity=0.092 Sum_probs=50.4
Q ss_pred HHHHHHHHHHcCCCCCCCc----eeeccccch-------------------------------hHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQID----YYEINEAFS-------------------------------VVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId----~~~~hd~~~-------------------------------~~~~~~~e~lGl~~~~v 349 (414)
.+++++||+++|++++||| .+.+..... ...-.+...||+....+
T Consensus 103 l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 182 (437)
T 2gqd_A 103 IVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNG 182 (437)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEE
T ss_pred HHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceE
Confidence 5789999999999999998 555432211 12233455677754222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
.+ ...++|++..+..+...|+.+..+..|+.
T Consensus 183 ~v--------~~aCsS~l~Al~~A~~~I~~G~~d~aLvg 213 (437)
T 2gqd_A 183 AT--------VTACATGTNSIGEAFKIVQRGDADAMITG 213 (437)
T ss_dssp CB--------CCGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred Ee--------cCCccHHHHHHHHHHHHHHcCCCCEEEEe
Confidence 22 34568888899999999998766665533
No 138
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=69.46 E-value=10 Score=36.59 Aligned_cols=77 Identities=12% Similarity=0.031 Sum_probs=52.7
Q ss_pred HHHHHHHHHHcC----CCCCCCceeeccccc-----hhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHH
Q 015003 305 SLAIPKAIANAG----LEASQIDYYEINEAF-----SVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLL 374 (414)
Q Consensus 305 ~~a~~~al~~aG----l~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~ 374 (414)
.++++++|+++| ++++|||.+.+-... ......+...+|++.. +... . +..++||+..+..+.
T Consensus 40 ~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~------v-~~aCasg~~Al~~A~ 112 (393)
T 1afw_A 40 YNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVA------L-NRQCSSGLTAVNDIA 112 (393)
T ss_dssp HHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEE------E-ECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEE------E-cCcCHHHHHHHHHHH
Confidence 578999999999 999999987753221 2234445677898532 2111 1 344678888999999
Q ss_pred HHHHhcCCCeeEEe
Q 015003 375 GVLRHKKGKYGVGG 388 (414)
Q Consensus 375 ~ql~~~~~~~~l~~ 388 (414)
..++.+..+..|+.
T Consensus 113 ~~I~~G~~d~vLv~ 126 (393)
T 1afw_A 113 NKIKVGQIDIGLAL 126 (393)
T ss_dssp HHHHTTSCSEEEEE
T ss_pred HHHHCCCCCEEEEE
Confidence 99997766665543
No 139
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=68.96 E-value=4.3 Score=39.93 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=58.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++| ++|||.+.+- +........+.+.||+.+..... .+. ..+++|+..+..+...++.
T Consensus 90 ~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~-----dv~-~aC~gg~~AL~~A~~~i~s 161 (425)
T 3sqz_A 90 AGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSF-----EMK-EAAYSATAALNYAKLHVEK 161 (425)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCSSCEEE-----EEC-CC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCCCeeEE-----EEc-CHhHHHHHHHHHHHHHHHc
Confidence 578899999988 9999999853 23344566678899986521111 121 2345566667777777776
Q ss_pred cCCCeeEEee-------------cccccceeeEEEEEecc
Q 015003 380 KKGKYGVGGI-------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 380 ~~~~~~l~~~-------------~~~gg~~~a~vl~~~~~ 406 (414)
+..++.|+.. ..+|...+|+||+..+.
T Consensus 162 g~~~~vLVvgae~~s~~~~~~~~~lfGDGA~A~ll~~~~~ 201 (425)
T 3sqz_A 162 HPDTRVLVLASDIAKYGIGTPGESTQGAGSIAMLVKKDPR 201 (425)
T ss_dssp STTCEEEEEEEEEECCCTTSGGGGGCEEEEEEEEEEESCS
T ss_pred CCCCeEEEEEEehhcccCCCCCCCcccceeeEEEeecCCc
Confidence 6666665332 12344557888876544
No 140
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=68.79 E-value=7.7 Score=37.46 Aligned_cols=77 Identities=13% Similarity=0.044 Sum_probs=52.6
Q ss_pred HHHHHHHHHHc-CCCCCCCceeeccccc------hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANA-GLEASQIDYYEINEAF------SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~a-Gl~~~DId~~~~hd~~------~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
.++++++|+++ |++++|||.+.+-... ....-.+...+|+++.- ..... ...++||+..+..+...+
T Consensus 35 ~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~-----p~~~v-~~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 35 AHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTS-----AAQTV-SRLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTS-----EEEEE-ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCc-----cEEEE-cccchhHHHHHHHHHHHH
Confidence 57899999999 9999999887753221 22334456667774321 11112 455788898999999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 109 ~~G~~d~vlv 118 (390)
T 1wdk_C 109 MTGNGDVFVV 118 (390)
T ss_dssp HTTSCSEEEE
T ss_pred HcCCCCEEEE
Confidence 9877776554
No 141
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=63.99 E-value=5.2 Score=38.81 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=58.5
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++| ++|||.+.+. +........+.+.||+.+...... + +..+++|+..+..+...++.
T Consensus 61 ~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~d-----v-~~aC~gg~~AL~~A~~~i~s 132 (388)
T 3v4n_A 61 ANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFE-----I-KEAXYGATAGLQLAKNHVAL 132 (388)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEE-----E-ESGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEee-----h-hhhhhHHHHHHHHHHHHHhc
Confidence 578888999887 8999999853 223344566788999865211111 1 12345666677777777777
Q ss_pred cCCCeeEEee-------------cccccceeeEEEEEecc
Q 015003 380 KKGKYGVGGI-------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 380 ~~~~~~l~~~-------------~~~gg~~~a~vl~~~~~ 406 (414)
+..++.|+.. ...|...+++||+..+.
T Consensus 133 g~~~~vLVvg~e~~s~~~~~~~~~lfGDGA~A~ll~~~~~ 172 (388)
T 3v4n_A 133 HPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVSSEPR 172 (388)
T ss_dssp CTTCEEEEEEEEEECCCTTCTTGGGCEEEEEEEEEEESCS
T ss_pred CCCCEEEEEEehhhcccCCCCCCCccccceeEEEeecCCC
Confidence 6666665332 11333556888876544
No 142
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=63.70 E-value=6.7 Score=38.44 Aligned_cols=77 Identities=14% Similarity=0.130 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEE-EeecCCCCCCcHHHHHHHHCCCCCC-cceee-----EccCCchHHHHHHHHHH
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFF-GNVLSANLGQAPARQAALGAGIPNS-VVCTT-----INKVCSSGMKAVMLAAQ 111 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~-g~~~~~~~~~~~a~~va~~lgl~~~-~~~~~-----v~~aC~s~~~al~~A~~ 111 (414)
.-..+++++||+++|++|+|||.+.. ++.+ ...+.-...+...+|.+.. ++... =...+++|+..+..+..
T Consensus 293 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT--~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~ 370 (428)
T 3kzu_A 293 EGAQRCMVAALKRAGIVPDEIDYINAHGTST--MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTL 370 (428)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSS--TTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHeeEEEecCCcc--hhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHH
Confidence 45568899999999999999999853 2221 1111112224444554211 11111 12346788888888999
Q ss_pred HHHcCC
Q 015003 112 SIQLGI 117 (414)
Q Consensus 112 ~I~sG~ 117 (414)
+++.+.
T Consensus 371 ~l~~~~ 376 (428)
T 3kzu_A 371 AIRDNI 376 (428)
T ss_dssp HHHHTE
T ss_pred HhccCc
Confidence 998874
No 143
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=62.66 E-value=36 Score=33.06 Aligned_cols=74 Identities=8% Similarity=0.049 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCCCCCCce----eeccccch-------------------------------hHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQIDY----YEINEAFS-------------------------------VVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~----~~~hd~~~-------------------------------~~~~~~~e~lGl~~~~v 349 (414)
.+++++||+++|++++|||- +.+..... ...-.+...||+....+
T Consensus 98 l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~ 177 (430)
T 1ox0_A 98 LYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCK 177 (430)
T ss_dssp HHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCceE
Confidence 57899999999999999982 33221110 11223345566654222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
.+ ....+||+..+..+...|+.+..+..|
T Consensus 178 ~v--------~~aCsS~l~Al~~A~~~I~~G~~d~aL 206 (430)
T 1ox0_A 178 SI--------NTACSSSNDAIGDAFRSIKFGFQDVML 206 (430)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTSCSEEE
T ss_pred ee--------cCchHHHHHHHHHHHHHHHcCCCCEEE
Confidence 22 345688898999999999977666544
No 144
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=61.55 E-value=30 Score=33.32 Aligned_cols=75 Identities=15% Similarity=0.190 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCCCCCCce----eeccccc-------------------------------hhHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQIDY----YEINEAF-------------------------------SVVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~----~~~hd~~-------------------------------~~~~~~~~e~lGl~~~~v 349 (414)
.++++++|+++|++++|||. +.+.... ....-.+...||+....+
T Consensus 76 ~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 155 (408)
T 1j3n_A 76 LIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSS 155 (408)
T ss_dssp HHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBC
T ss_pred HHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCcee
Confidence 57899999999999999883 2211110 012233455677754222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
.+ ....+|++..+..+...|+.+..+..|+
T Consensus 156 ~v--------~~aCsS~l~Al~~A~~~I~~G~~d~aLv 185 (408)
T 1j3n_A 156 TV--------VTACATGADALGSALRMIQLGEADLVLA 185 (408)
T ss_dssp CB--------CCGGGHHHHHHHHHHHHHHTTSCSEEEE
T ss_pred Cc--------cCchHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 22 3456888889999999999776665543
No 145
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=60.14 E-value=25 Score=33.98 Aligned_cols=74 Identities=14% Similarity=0.019 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcCCCCCCCc----eeecccc-------------------------------chhHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQID----YYEINEA-------------------------------FSVVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId----~~~~hd~-------------------------------~~~~~~~~~e~lGl~~~~v 349 (414)
.++++++|+++|++++||| .+.+-.. .....-.+...||+....+
T Consensus 84 l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 163 (415)
T 1tqy_B 84 LTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSS 163 (415)
T ss_dssp HHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceE
Confidence 5789999999999999987 3332211 1122334456677754222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
.+ ...++|++..+..+...|+.+ .+..|+
T Consensus 164 ~v--------~~aCsS~l~Al~~A~~~I~~G-~d~~Lv 192 (415)
T 1tqy_B 164 AL--------VAEQAGGLDALGHARRTIRRG-TPLVVS 192 (415)
T ss_dssp EE--------ECGGGHHHHHHHHHHHHHHHT-CSEEEE
T ss_pred ee--------cCCccHHHHHHHHHHHHHHcC-CCEEEE
Confidence 11 345688898999999999988 776554
No 146
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=57.13 E-value=49 Score=32.10 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCCCCCCce----eeccccc-------------------------------hhHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQIDY----YEINEAF-------------------------------SVVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~----~~~hd~~-------------------------------~~~~~~~~e~lGl~~~~v 349 (414)
.+++++||+.||++++|||. +.+-... ....-.+...||+....+
T Consensus 93 l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~ 172 (427)
T 3ho9_A 93 IVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSI 172 (427)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCCCCee
Confidence 57899999999999999983 2221110 011223455667654222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
.+ ...++|++..+..+...|+.+..+..|+
T Consensus 173 ~v--------~taCsS~l~Al~~A~~~I~~G~~d~aLv 202 (427)
T 3ho9_A 173 SI--------ATAATSGVHNIGHAARIIAYGDADVMVA 202 (427)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHHTSCSEEEE
T ss_pred cc--------cchhHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 22 3446788889999999999876666553
No 147
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=56.24 E-value=6.7 Score=38.02 Aligned_cols=25 Identities=12% Similarity=-0.105 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCCCccccCeEEE
Q 015003 40 LGSIAIECALKRANVKPLLVQEVFF 64 (414)
Q Consensus 40 L~~~A~~~AL~dAgi~~~~Id~vi~ 64 (414)
...++++++|+++|++++|||.+++
T Consensus 208 ~~~~~~~~~L~~agl~~~did~~~~ 232 (396)
T 1xpm_A 208 SFQQSWNEYAKRQGKSLADFASLCF 232 (396)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 3677899999999999999999876
No 148
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=55.60 E-value=15 Score=34.63 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCeEEEEee
Q 015003 38 TKLGSIAIECALKRANVKPLLVQEVFFGNV 67 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~ 67 (414)
.+....+++++|+++|++++|||.|.++..
T Consensus 53 ~~~l~~~i~~~L~~ag~~~~did~Iav~~g 82 (334)
T 3eno_A 53 SEVIDTVISRALEKAKISIHDIDLIGFSMG 82 (334)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 346788999999999999999999988643
No 149
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=53.54 E-value=41 Score=36.40 Aligned_cols=99 Identities=17% Similarity=0.111 Sum_probs=58.2
Q ss_pred eEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEE-EeecCCCCCCcHHHHHHHHCCCCC--Ccc
Q 015003 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF-GNVLSANLGQAPARQAALGAGIPN--SVV 91 (414)
Q Consensus 15 v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~-g~~~~~~~~~~~a~~va~~lgl~~--~~~ 91 (414)
..|.|.+...=++..+ . .....+-..+++++||+++|++|+|||.+.. |+.++ ...+.-..-+...++... ..+
T Consensus 264 a~I~G~~~~~dg~~~~-~-~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~-~gD~~E~~al~~~f~~~~~~~~~ 340 (915)
T 2qo3_A 264 AVVRGSALNQDGASNG-L-SAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTA-LGDPIEANALLDTYGRDRDADRP 340 (915)
T ss_dssp EEEEEEEEEECCSCSS-T-TCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCT-TTHHHHHHHHHHHTSSSCCTTSC
T ss_pred EEEEEEEEecCCCccC-C-CCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCc-cCCHHHHHHHHHHhccccCCCCc
Confidence 3566766433222221 1 1122456678899999999999999999863 33222 112223334556666421 112
Q ss_pred eeeE--------ccCCchHHHHHHHHHHHHHcCC
Q 015003 92 CTTI--------NKVCSSGMKAVMLAAQSIQLGI 117 (414)
Q Consensus 92 ~~~v--------~~aC~s~~~al~~A~~~I~sG~ 117 (414)
+ .+ ...+++|+..+..+..+++.|.
T Consensus 341 ~-~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ 373 (915)
T 2qo3_A 341 L-WLGSVKSNIGHTQAAAGVTGLLKVVLALRNGE 373 (915)
T ss_dssp E-EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred c-cccCcccceeCCccccchHHHHHHHHHHhcCC
Confidence 2 11 2346788889999999999875
No 150
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=50.78 E-value=55 Score=31.54 Aligned_cols=75 Identities=16% Similarity=0.099 Sum_probs=46.3
Q ss_pred HHHHHHHHHHcCC-CCCCCc----eeeccccc-------------------------------hhHHHHHHHHcCCCCCC
Q 015003 305 SLAIPKAIANAGL-EASQID----YYEINEAF-------------------------------SVVAIANQKLLGLDPEQ 348 (414)
Q Consensus 305 ~~a~~~al~~aGl-~~~DId----~~~~hd~~-------------------------------~~~~~~~~e~lGl~~~~ 348 (414)
..++++||+++|+ ++++|| -+.+.... ....-.+...||+....
T Consensus 82 l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~ 161 (412)
T 4ewg_A 82 VRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRI 161 (412)
T ss_dssp HHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCCc
Confidence 5789999999999 666666 33322111 01122344556664422
Q ss_pred cCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 349 vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
+.+ ....+|++..+..+.+.|+.+..+..|+
T Consensus 162 ~~v--------~~aCsS~l~Al~~A~~~I~~G~~d~~Lv 192 (412)
T 4ewg_A 162 VPT--------SSACASGSQAIGYAYENIAMGKQTLMLA 192 (412)
T ss_dssp EEC--------CCGGGHHHHHHHHHHHHHHTTSCSEEEE
T ss_pred ccc--------cchhHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 222 3456888999999999999876666554
No 151
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=48.78 E-value=67 Score=31.00 Aligned_cols=75 Identities=11% Similarity=0.033 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCCCCCc-----eeeccccchh-----------------------------H---HH----HHHHHcC
Q 015003 305 SLAIPKAIANAGLEASQID-----YYEINEAFSV-----------------------------V---AI----ANQKLLG 343 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId-----~~~~hd~~~~-----------------------------~---~~----~~~e~lG 343 (414)
.+++.++|+++|+++++|| ++.-...... . .- .+...||
T Consensus 78 l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lg 157 (424)
T 1tqy_A 78 VACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVG 157 (424)
T ss_dssp HHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcC
Confidence 5789999999999999998 4431110000 0 11 3344566
Q ss_pred CCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 344 LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 344 l~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
+....+. . ....+|++..+..+...|+.+..+..|+
T Consensus 158 l~gp~~~-------v-~~aCsS~l~Al~~A~~~I~~G~~d~aLv 193 (424)
T 1tqy_A 158 AEGPVTM-------V-STGCTSGLDSVGNAVRAIEEGSADVMFA 193 (424)
T ss_dssp CCSCEEE-------E-CCGGGHHHHHHHHHHHHHHHTSCSEEEE
T ss_pred CCCceEe-------e-cCcccHHHHHHHHHHHHHHCCCCCEEEE
Confidence 5432121 2 3456888889999999999876665553
No 152
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=48.52 E-value=47 Score=32.28 Aligned_cols=76 Identities=11% Similarity=0.004 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHcCC-CCCCCc-----eeeccccc------------------------------hhHHHHHHHHcCCCCC
Q 015003 304 PSLAIPKAIANAGL-EASQID-----YYEINEAF------------------------------SVVAIANQKLLGLDPE 347 (414)
Q Consensus 304 ~~~a~~~al~~aGl-~~~DId-----~~~~hd~~------------------------------~~~~~~~~e~lGl~~~ 347 (414)
..+++++||+++|+ ++++|| ++.-.... ....-.+...||+...
T Consensus 92 ~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp 171 (431)
T 2ix4_A 92 AVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGP 171 (431)
T ss_dssp HHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHCCCCc
Confidence 35789999999999 888776 44321100 0123344566777542
Q ss_pred CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 348 QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 348 ~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
.+.+ ...++|++..+..+...|+.+..+..|+
T Consensus 172 ~~~v--------~taCsS~l~Al~~A~~~I~~G~~d~aLv 203 (431)
T 2ix4_A 172 NHAA--------VTACATGAHSIGDATRMIQFGDADVMVA 203 (431)
T ss_dssp EECB--------CCGGGHHHHHHHHHHHHHHHTSCSEEEE
T ss_pred eeCc--------cChhHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 2222 3456888889999999999876666553
No 153
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=48.35 E-value=34 Score=33.30 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCCCCCCc-----eeeccccc------------------------------hhHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQID-----YYEINEAF------------------------------SVVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId-----~~~~hd~~------------------------------~~~~~~~~e~lGl~~~~v 349 (414)
..++++||+++|+++++|| ++.-.... ....-.+...||+....+
T Consensus 97 ~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 176 (428)
T 3mqd_A 97 HIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINY 176 (428)
T ss_dssp HHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCcee
Confidence 5788999999999988887 33211100 011223455567644222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
.+ ....+||+..+..+.+.|+.+..+..|+.
T Consensus 177 tv--------~~aCsSgl~Ai~~A~~~I~~G~~d~alvg 207 (428)
T 3mqd_A 177 SI--------SSACATSNHCIGNAYEMIQYGKQDRMFAG 207 (428)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred ee--------cCccHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 22 35578999999999999998776665543
No 154
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=47.56 E-value=66 Score=31.46 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCCCCCC-c-----eeecccc-----------------------c-------hhHHHHHHHHcCCCCCC
Q 015003 305 SLAIPKAIANAGLEASQI-D-----YYEINEA-----------------------F-------SVVAIANQKLLGLDPEQ 348 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DI-d-----~~~~hd~-----------------------~-------~~~~~~~~e~lGl~~~~ 348 (414)
.+++++||+.||++++|| | ++.-... + ....-.+...||+....
T Consensus 107 l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 186 (451)
T 4ddo_A 107 MVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPL 186 (451)
T ss_dssp HHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhcCCCce
Confidence 578999999999999998 5 3321100 0 01122345567765422
Q ss_pred cCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 349 vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
+.+ ...++|++..+..+...++.+..+..|+
T Consensus 187 ~~v--------~~aCsS~l~Al~~A~~~I~~G~~d~vLv 217 (451)
T 4ddo_A 187 GCP--------VTACAASVQAIGDAMRMIRTGEADVVLA 217 (451)
T ss_dssp ECC--------CCGGGHHHHHHHHHHHHHHHTSCSEEEE
T ss_pred eee--------cCccHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 222 3446888989999999999877666554
No 155
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=46.05 E-value=56 Score=31.86 Aligned_cols=75 Identities=15% Similarity=0.036 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCC-CCCc-----eeeccccc------------------------------hhHHHHHHHHcCCCCCC
Q 015003 305 SLAIPKAIANAGLEA-SQID-----YYEINEAF------------------------------SVVAIANQKLLGLDPEQ 348 (414)
Q Consensus 305 ~~a~~~al~~aGl~~-~DId-----~~~~hd~~------------------------------~~~~~~~~e~lGl~~~~ 348 (414)
.+++++||+++|+++ ++|| ++.-.... ....-.+...||+....
T Consensus 102 l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 181 (438)
T 2iwz_A 102 IGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPN 181 (438)
T ss_dssp HHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhCCCCce
Confidence 578999999999998 7776 44321100 11233345567775422
Q ss_pred cCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 349 vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
+.+ ...++|++..+..+...|+.+..+..|+
T Consensus 182 ~~v--------~taCsS~l~Al~~A~~~I~~G~~d~aLv 212 (438)
T 2iwz_A 182 HAV--------STACTTGAHAVGDSFRFIAHGDADVMVA 212 (438)
T ss_dssp ECB--------CCGGGHHHHHHHHHHHHHHHTSCSEEEE
T ss_pred eee--------cCchhHHHHHHHHHHHHHHcCCCCEEEE
Confidence 222 3456888889999999999876665553
No 156
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=43.54 E-value=13 Score=35.06 Aligned_cols=29 Identities=21% Similarity=0.123 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEEEee
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFFGNV 67 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~g~~ 67 (414)
+....+++++|+++|++++|||.|.++..
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~G 77 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQG 77 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 46667899999999999999999987644
No 157
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=40.23 E-value=27 Score=37.82 Aligned_cols=100 Identities=19% Similarity=0.107 Sum_probs=56.0
Q ss_pred eEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEE-EeecCCCCCCcHHHHHHHHCCCCC--Ccc
Q 015003 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF-GNVLSANLGQAPARQAALGAGIPN--SVV 91 (414)
Q Consensus 15 v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~-g~~~~~~~~~~~a~~va~~lgl~~--~~~ 91 (414)
..|.|.+...-++..+. . ....+-..+++++||+++|++|+|||.+.. |+.++. ..+.-..-+...+|... ..+
T Consensus 286 a~I~G~~~~~dg~~~~~-~-~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~-gD~~E~~al~~~fg~~~~~~~~ 362 (917)
T 2hg4_A 286 AVLRGSAVNQDGASNGL-T-APSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRL-GDPIEVHALLSTYGAERDPDDP 362 (917)
T ss_dssp EEEEEEEEEECCSCSSS-S-CCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTT-HHHHHHHHHHTTTTTSSCTTSC
T ss_pred EEEEEEEEecCCCccCC-C-CCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCcc-CcHHHHHHHHHHhccccCCCCc
Confidence 34667665433333221 1 122455678899999999999999998863 222221 11111222333444311 112
Q ss_pred ee--e----E-ccCCchHHHHHHHHHHHHHcCC
Q 015003 92 CT--T----I-NKVCSSGMKAVMLAAQSIQLGI 117 (414)
Q Consensus 92 ~~--~----v-~~aC~s~~~al~~A~~~I~sG~ 117 (414)
+. . + ...+++|+..+..+..+++.|.
T Consensus 363 ~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ 395 (917)
T 2hg4_A 363 LWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGE 395 (917)
T ss_dssp CEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTE
T ss_pred eeccCcccceecchhhhHHHHHHHHHHHHhcCC
Confidence 11 1 1 2345788889999999999875
No 158
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=31.89 E-value=21 Score=36.35 Aligned_cols=28 Identities=29% Similarity=0.333 Sum_probs=24.9
Q ss_pred chHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 303 APSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 303 ~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
-|..+++.+|+++|++++|||.|-.+..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 5688999999999999999999986654
No 159
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=30.95 E-value=46 Score=31.44 Aligned_cols=56 Identities=13% Similarity=-0.069 Sum_probs=38.3
Q ss_pred ceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCC
Q 015003 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~ 87 (414)
+..++|+|+ +++ ...+...++++++|+++|+.+++|+.+... . .- -..++..+|++
T Consensus 208 ~~lvvGIGc-----rrg-----~~~~~i~~ai~~aL~~~~l~~~~v~~iasi--d--~K----L~~~A~~l~~p 263 (336)
T 3eeq_A 208 LKISIGIGS-----KKD-----VKMEEIRDGIYKVLERLNLKRERIGIIASI--R--EE----VKKIADEFNVR 263 (336)
T ss_dssp CEEEEEEEE-----CSS-----CCHHHHHHHHHHHHHHHTCCGGGEEEEEES--C--TT----HHHHHHHHTCE
T ss_pred CeEEEEEec-----CCC-----CCHHHHHHHHHHHHHHcCCCHHHhhEEEcH--H--HH----HHHHHHHhCCC
Confidence 467889886 333 344667789999999999999998777532 1 11 44566666653
No 160
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=29.27 E-value=1.6e+02 Score=28.43 Aligned_cols=74 Identities=12% Similarity=-0.032 Sum_probs=44.6
Q ss_pred HHHHHHHHHHcCCC---CCCCceeeccccch------------------------------hHHHHHHHHcCCCCCCcCC
Q 015003 305 SLAIPKAIANAGLE---ASQIDYYEINEAFS------------------------------VVAIANQKLLGLDPEQVNA 351 (414)
Q Consensus 305 ~~a~~~al~~aGl~---~~DId~~~~hd~~~------------------------------~~~~~~~e~lGl~~~~vn~ 351 (414)
.+++++||+.+|++ .++|+++.-..... ...-.+...||+....+.+
T Consensus 104 l~aa~~ALedAG~~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~Gp~~~v 183 (434)
T 2gp6_A 104 TVLSRRLWENAGSPEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTP 183 (434)
T ss_dssp HHHHHHHHHHTTCCCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCSCEECE
T ss_pred HHHHHHHHHhcCCCccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCCCeEEe
Confidence 57889999999984 45566664211100 1122345556664322222
Q ss_pred CCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 352 HGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
....+|++..+..+...|+.+..+..|
T Consensus 184 --------~~aCsS~l~Al~~A~~~I~~G~~d~aL 210 (434)
T 2gp6_A 184 --------VSACASGAEAIARAWQQIVLGEADAAI 210 (434)
T ss_dssp --------ECGGGHHHHHHHHHHHHHHHTSCSEEE
T ss_pred --------CCCCcHHHHHHHHHHHHHHcCCCCEEE
Confidence 234678888999999999877655544
No 161
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=28.89 E-value=2.1e+02 Score=27.38 Aligned_cols=41 Identities=12% Similarity=0.065 Sum_probs=26.7
Q ss_pred HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 338 NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 338 ~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
+...||+....+.+ .+..+|++..+..+...|+.+..+..|
T Consensus 154 ia~~lgl~gp~~~v--------~~aCsS~l~Al~~A~~~I~~G~~d~~L 194 (416)
T 2wge_A 154 IGLQLGARAGVMTP--------VSACSSGSEAIAHAWRQIVMGDADVAV 194 (416)
T ss_dssp HHHHHTCCSCEECC--------CCGGGHHHHHHHHHHHHHHTTSCSEEE
T ss_pred HHHHhccCCCcccc--------cCchHHHHHHHHHHHHHHHcCCCCEEE
Confidence 45566765422222 334688888999999999977655544
No 162
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=28.70 E-value=1.4e+02 Score=24.38 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHH----HHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc
Q 015003 36 SATKLGSIAIECA----LKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (414)
Q Consensus 36 ~~~~L~~~A~~~A----L~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~ 96 (414)
+..+-..+|.+++ ++.-+++++||=.++| +.+++...-++|..+. .+|+. .+|.+...
T Consensus 44 Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~F-TvT~DL~A~FPA~aaR-~~Gw~-~VPLmc~q 105 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEKNGLEEDDIISIIF-TVTKDLDAAFPAIAAR-NMGWT-STALMCMN 105 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE-EECTTCCSSCTHHHHH-HTTCT-TSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE-EeCCccCccChHHHHH-HcCCC-ccchhhcc
Confidence 3334444555544 5567899999999998 4566665555664444 56887 58877654
No 163
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=28.37 E-value=1.1e+02 Score=25.32 Aligned_cols=30 Identities=20% Similarity=-0.041 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHHHHcC-CCccccCeEEE
Q 015003 35 VSATKLGSIAIECALKRAN-VKPLLVQEVFF 64 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAg-i~~~~Id~vi~ 64 (414)
....+-..+.+.+.|++.| ++.++|+.+.+
T Consensus 24 ~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~V 54 (156)
T 3nq4_A 24 QFINDSLLDGAVDALTRIGQVKDDNITVVWV 54 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccceEEEEc
Confidence 4667788888999999999 98888875543
No 164
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=26.70 E-value=97 Score=25.55 Aligned_cols=59 Identities=12% Similarity=-0.013 Sum_probs=42.1
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCc---HHHHHHHHCCCCC
Q 015003 27 GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA---PARQAALGAGIPN 88 (414)
Q Consensus 27 ~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~---~a~~va~~lgl~~ 88 (414)
.....+++.+...|..++.+. +++.|+....||..+++.... ..|. .-..++..|+++.
T Consensus 63 dtdp~~kga~S~~lL~~~~~~-~~~~G~~i~NvD~tii~q~PK--i~p~~~~m~~~ia~~L~~~~ 124 (152)
T 1iv3_A 63 DTDPRWRGERSEVFLREAMRL-VEARGAKLLQASLVLTLDRPK--LGPHRKALVDSLSRLMRLPQ 124 (152)
T ss_dssp TTSTTTTTCCHHHHHHHHHHH-HHHTTCCEEEEEEEEECSSSC--CGGGHHHHHHHHHHHHTCCG
T ss_pred CCChhhCCCCHHHHHHHHHHH-HHHcCCEEEEEEEEEEecCCc--CHHHHHHHHHHHHHHhCCCC
Confidence 334455678899999987765 799999999999988864322 2333 3446888899863
No 165
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=26.37 E-value=66 Score=30.88 Aligned_cols=28 Identities=7% Similarity=0.005 Sum_probs=21.5
Q ss_pred CCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 360 HPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 360 h~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
....+|++..+..+.+.|+.+..+..|+
T Consensus 160 ~taCsS~l~Al~~A~~~I~~G~~d~alv 187 (406)
T 2vba_A 160 SSACATSAHCIGNAVEQIQLGKQDIVFA 187 (406)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEE
T ss_pred ccchhHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3456889999999999999876665543
No 166
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=26.03 E-value=73 Score=34.63 Aligned_cols=75 Identities=9% Similarity=0.042 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCCCCCc----eeecc----c--------------------cchhHHHHHHHHcCCCCCCcCCCCCcc
Q 015003 305 SLAIPKAIANAGLEASQID----YYEIN----E--------------------AFSVVAIANQKLLGLDPEQVNAHGGAV 356 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId----~~~~h----d--------------------~~~~~~~~~~e~lGl~~~~vn~~Gg~~ 356 (414)
.+++.+||++||+++++|+ -+.+- | ......-.+...||+....+.+
T Consensus 85 leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~GPs~tv----- 159 (965)
T 3hhd_A 85 LEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIAL----- 159 (965)
T ss_dssp HHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCSCEEEE-----
T ss_pred HHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCCCeeee-----
Confidence 4789999999999999887 22211 0 0111122234556664422222
Q ss_pred ccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
.+..+|++..+..+...|+.+.-+..|+
T Consensus 160 ---dtACSSsl~Al~~A~~~I~~G~~d~aLa 187 (965)
T 3hhd_A 160 ---DTACSSSLMALQNAYQAIHSGQCPAAIV 187 (965)
T ss_dssp ---ECGGGHHHHHHHHHHHHHHTTSCSEEEE
T ss_pred ---cCchHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3556889999999999999876665543
No 167
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=23.81 E-value=88 Score=32.18 Aligned_cols=66 Identities=12% Similarity=0.106 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHH----HHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHH
Q 015003 34 SVSATKLGSIAIEC----ALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (414)
Q Consensus 34 ~~~~~~L~~~A~~~----AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~ 103 (414)
|.+..+++..|++. +|+.+|++++|||.++++-.++.+ ....-+..+|+-|..+.-.+.....+++
T Consensus 506 DIr~~qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~----l~~~~a~~iGllP~~~~~ki~~vGN~sl 575 (631)
T 3zyy_X 506 DIQNLIRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKY----LNIKDAITIGLLPDIDINKFSYVGNSSL 575 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSE----EEHHHHHHHTSSCCSCGGGEEECSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEecccccc----CCHHHHhhcCCCCCccccCEEEECcHHH
Confidence 45666777776654 477899999999999998766654 3334455667644554333333333433
No 168
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=23.40 E-value=45 Score=34.00 Aligned_cols=27 Identities=22% Similarity=0.118 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHcCCCccccCeEEEEe
Q 015003 40 LGSIAIECALKRANVKPLLVQEVFFGN 66 (414)
Q Consensus 40 L~~~A~~~AL~dAgi~~~~Id~vi~g~ 66 (414)
+-..|++.+|+.||++++|||.|.+..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~ 77 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGW 77 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESS
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 445678899999999999999998743
No 169
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=22.47 E-value=1e+02 Score=25.51 Aligned_cols=59 Identities=20% Similarity=0.157 Sum_probs=36.3
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCC
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~ 87 (414)
..+.++|+|+ +++ ...+...++++++|+++|+. |+.+... .- -..-..-..++..+|++
T Consensus 8 ~~~lvvGIGc-----rrg-----~~~~~i~~ai~~aL~~~gl~---v~~lATi--d~-K~dE~gL~e~A~~lgvP 66 (155)
T 3by5_A 8 AMVTVAGIGC-----RKG-----AASDAIIAAVRAAERAFGVT---VDYLATA--PL-KADEAGLAEAAKGLSLS 66 (155)
T ss_dssp --CEEEEEEE-----CSS-----CCHHHHHHHHHHHHHHHTCC---CCEEEES--SC-CSCCHHHHHHHHHTTCC
T ss_pred CCEEEEEEcc-----CCC-----CCHHHHHHHHHHHHHHCCCC---eEEEEch--hh-hCCCHHHHHHHHHhCCC
Confidence 3578899986 333 34455677899999999997 6655432 11 11222334677888874
No 170
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=22.11 E-value=1.6e+02 Score=23.37 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=36.4
Q ss_pred HHHHHHHHHH----HHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHC-CCCCCcceeeEc
Q 015003 39 KLGSIAIECA----LKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGA-GIPNSVVCTTIN 96 (414)
Q Consensus 39 ~L~~~A~~~A----L~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~l-gl~~~~~~~~v~ 96 (414)
+-..+|.+++ ++.-+++++||=+++| +.+++...-++|..+. .+ |+. .+|.+...
T Consensus 18 e~I~~at~eLl~~i~~~N~l~~~dIvSv~F-T~T~DL~a~FPA~aaR-~~~gw~-~VpL~c~q 77 (127)
T 1dbf_A 18 EEILQKTKQLLEKIIEENHTKPEDVVQMLL-SATPDLHAVFPAKAVR-ELSGWQ-YVPVTCMQ 77 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEE-EECTTCCSSCTHHHHH-TSTTCT-TSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEE-EeCCccCccChHHHHh-ccCCCC-ccchhhcc
Confidence 3344445444 5567999999999999 4566665555665444 55 886 58877654
Done!