RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 015003
(414 letters)
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 742 bits (1917), Expect = 0.0
Identities = 332/394 (84%), Positives = 368/394 (93%), Gaps = 1/394 (0%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RDVCIVGVARTP+GGFLGSLSS+SAT+LGSIAI+ AL+RA V P LVQEVFFGNVLSANL
Sbjct: 1 RDVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL 60
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQAPARQAALGAG+P S +CTT+NKVC+SGMKAVMLAAQSIQLGIND+VVAGGMESMSNA
Sbjct: 61 GQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNA 120
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
PKYL EARKGSRLGHDT+VDGMLKDGLWDVYNDFGMGVCAE+CA++++I+R+EQD+YAI+
Sbjct: 121 PKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQ 180
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251
S++R IAAQ +G FAWEI PVE+ GRG+P +IVDKDEGL KFD AKL KLRPSFKE GG
Sbjct: 181 SYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
SVTAGNAS ISDGAAALVLVSG KALELGLQVIAKIRG+ADAAQAPE FTTAP+LAIPKA
Sbjct: 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKA 300
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ +AGLEASQ+DYYEINEAFSVVA+ANQKLLGLDPE+VN HGGAVSLGHP+GCSGARILV
Sbjct: 301 LKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILV 360
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLELMQ 405
TLLGVLR K GKYGV GICNGGGGASA+V+ELMQ
Sbjct: 361 TLLGVLRSKNGKYGVAGICNGGGGASAIVVELMQ 394
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 507 bits (1307), Expect = e-180
Identities = 207/387 (53%), Positives = 267/387 (68%), Gaps = 4/387 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G F G+L VSA LG+ I+ L+RA + P V +V GNVL A GQ P
Sbjct: 2 IVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNP 61
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV TT+N+VC SG++AV LAAQSI G D+VVAGG+ESMS AP L
Sbjct: 62 ARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLL 121
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+AR+G RLG +T+ DGML DGL D + MG+ AE A K+ I+R+EQD +A+RS +R
Sbjct: 122 PKARRGGRLGLNTL-DGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQR 180
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVTA 255
AAQ +G F EI PVE+ +G ++VD+DEG KL KL+P+FK+ G+VTA
Sbjct: 181 AAAAQEAGRFKDEIVPVEVPGRKGP--VVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTA 238
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANA 315
GNAS I+DGAAA++L+S KA ELGL+ +A+I G+A A P P AIPKA+ A
Sbjct: 239 GNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRA 298
Query: 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLG 375
GL ID EINEAF+ A+A K LGLDPE+VN +GGA++LGHPLG SGARI+VTLL
Sbjct: 299 GLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLH 358
Query: 376 VLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G+YG+ +C GGG +A+V+E
Sbjct: 359 ELKRRGGRYGLATMCIGGGQGAAMVIE 385
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 473 bits (1219), Expect = e-167
Identities = 201/392 (51%), Positives = 261/392 (66%), Gaps = 4/392 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV ARTP+G F G+L VSA +LG+I I+ AL+RA V P V EV G VL A
Sbjct: 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAAL AG+P V TINKVC SG+KAV LAAQ+I+ G DIVVAGG ESMS A
Sbjct: 62 GQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L +R G ++G +VD M+ DGL D +N + MG+ AE A ++ ITR+EQD +A+
Sbjct: 122 PHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPSFKEG 250
S ++ AA +G F EI PV + +G P ++VD DE + D A L KLRP+F +
Sbjct: 182 SQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHP-RPDTTAESLAKLRPAFDKD 239
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAAA+V++S KA ELGL +A+I +A A P P AI K
Sbjct: 240 GTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRK 299
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 370
A+ AG + +D EINEAF+ A+A +K LGLDPE+VN +GGA++LGHP+G SGARIL
Sbjct: 300 ALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARIL 359
Query: 371 VTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
VTLL ++ + K G+ +C GGG AL++E
Sbjct: 360 VTLLHEMKRRGAKKGLATLCIGGGQGVALIVE 391
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 431 bits (1111), Expect = e-150
Identities = 194/388 (50%), Positives = 251/388 (64%), Gaps = 4/388 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP+G F GSL VSA LG+ I+ L+R + P L+ +V FGNVL A Q
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV T+N+ C+SG++AV+LAAQ I+ G D+VVAGG+ESMS P +
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 137 -AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195
R G + G+ + D +LKDGL D N MG+ AE A K+ I+R+EQD YA+RS +
Sbjct: 121 PRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQ 180
Query: 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVT 254
R A GLF EI PV S K ++V DEG+ KL KL+P+F G+VT
Sbjct: 181 RAAKAWEEGLFKDEIVPV--SVKGRKGPVVVSSDEGIRPNTTLEKLAKLKPAFDPNGTVT 238
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGN+S ++DGAAAL+L+S KA ELGL +A+I +A A PE P AIPKA+
Sbjct: 239 AGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAIPKALKK 298
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
AGL S ID +EINEAF+ +A K LGLD E+VN +GGA++LGHPLG SGARI+ TLL
Sbjct: 299 AGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLL 358
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G+YG+ IC GGG A++LE
Sbjct: 359 HELKRRGGRYGLATICIGGGQGIAVILE 386
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 397 bits (1021), Expect = e-137
Identities = 183/388 (47%), Positives = 245/388 (63%), Gaps = 4/388 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP G F GSL V AT+LG IAI+ AL+RANV V+EV G VL GQ P
Sbjct: 6 IVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIP 65
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
+RQAA AGIP V T+NKVC+SG++AV LA Q I+ G ++VAGGMESMSNAP L
Sbjct: 66 SRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYIL 125
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
AR G R+G + ++D M+ DGL ++ MGV A + I+R+ QD +A RS +R
Sbjct: 126 PGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQR 185
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KLMKLRPSFKEGGSVT 254
++A G F EI PV + +G P I+V KDE K D KL KL+P F + G++T
Sbjct: 186 AVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRK-DTTIEKLAKLKPVFDKTGTIT 243
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGNA ++DGAAALVL+S +A + G + +A I A + F P AI +
Sbjct: 244 AGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEK 303
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
G ID +EINEAF+ VA+A+ ++ G+DPE+VN +GGAV+LGHP+G SGARI+VTL+
Sbjct: 304 TGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLI 363
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G G+ IC+GGG A+++E
Sbjct: 364 HELKRRGGGIGIAAICSGGGQGDAVLIE 391
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 391 bits (1007), Expect = e-135
Identities = 198/398 (49%), Positives = 263/398 (66%), Gaps = 5/398 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
++ + I ARTPM F G +S++A +LG+ AI A++RA +KP + EV G VL
Sbjct: 3 AVDQDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVL 62
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQAPARQAALGAG+P SV CTT+NK+C SGM+A M A + G D++VAGGMES
Sbjct: 63 PAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMES 122
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG--MGVCAEICANKHTITRDEQ 186
M+NAP L +AR G R+GH ++D M DGL D Y D G MG AE CA ++ TR+ Q
Sbjct: 123 MTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAY-DKGRLMGTFAEECAGEYGFTREAQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D++AI S R A G FAWEIAPV ++ +G ++D+DE K + K+ L+P+
Sbjct: 182 DAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGD--TVIDRDEQPFKANPEKIPTLKPA 239
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
F + G+VTA N+S ISDGAAALV++ A LGL +A++ G + AQAP FTTAP
Sbjct: 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVG 299
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366
AI K G A+++D +EINEAF+VV +A K GL E+VN +GGA +LGHP+G SG
Sbjct: 300 AIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASG 359
Query: 367 ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
ARILVTL+G LR + GK GV +C GGG A+A+ +EL+
Sbjct: 360 ARILVTLIGALRARGGKRGVASLCIGGGEATAMGIELI 397
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 339 bits (872), Expect = e-114
Identities = 174/390 (44%), Positives = 249/390 (63%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F GSL+++ A +LG+ I L++ + P V EV G VL+A
Sbjct: 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P+SV T+NKVC SG+KA+ LAAQ+I+ G ++++AGG E+MS A
Sbjct: 62 GQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L AR G R+GH +VD M+ DGLWD +ND+ MG+ AE K+ I+R+ QD++A
Sbjct: 122 PYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252
S ++ +AA +G F EI P+ + +G+P ++ A L KL+P+FK+ GS
Sbjct: 182 SQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGS 241
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTAGNAS ++DGAAA++L+S KA LGL V+AKI +A+A P P A + +
Sbjct: 242 VTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCL 301
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
AG +++D E NEAF+ ++A K LG D +VN +GGA++LGHP+G SG R+LVT
Sbjct: 302 DKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVT 361
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LL + + K G+ +C GGG AL +E
Sbjct: 362 LLHEMIRRDAKKGLATLCIGGGQGVALAIE 391
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 262
Score = 323 bits (831), Expect = e-110
Identities = 150/261 (57%), Positives = 187/261 (71%), Gaps = 3/261 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
DV IV ARTP+G F GSL +SA LG+IAI+ AL+RA VKP V EV GNVL A G
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQAAL AGIP+SV TINKVC SG+KAV LAAQ+I+ G DIVVAGG+ESMSNAP
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
L +R G+R+G +VD MLKDGL D +N MG+ AE A K+ I+R+EQD +A+RS
Sbjct: 121 YVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFALRS 180
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF-KEGG 251
++ AAQ +G F EI PV + +GKP ++VDKDEG+ L KL+P+F KE G
Sbjct: 181 QQKAAAAQKAGKFKDEIVPVTIKGRKGKP-LVVDKDEGIRPGTTLESLAKLKPAFDKENG 239
Query: 252 SVTAGNASIISDGAAALVLVS 272
+VTAGNAS ++DGAAA++L+S
Sbjct: 240 TVTAGNASGLNDGAAAVLLMS 260
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 315 bits (809), Expect = e-105
Identities = 175/405 (43%), Positives = 234/405 (57%), Gaps = 31/405 (7%)
Query: 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR--ANVKPLLVQEVFFGNVLS 69
RDV IVG RTP G F GSL+ ++A LG+ I+ L+R A+V V +V G VL
Sbjct: 2 RDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQ 61
Query: 70 A-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQ ARQAAL AG+P SV T+N+ C+SG+ AV LAAQ+I G D+V+AGG+E
Sbjct: 62 AGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEK 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS+AP R+G R+ D+ VD M +D L D + MG+ AE A ++ I+R++QD
Sbjct: 122 MSDAPMG----REGVRVL-DSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDE 176
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLR 244
A++S K A +G F EI P ++ + V D + D + L
Sbjct: 177 VAVKSHKNAAANPKAGFF-DEITPEDVLNSP------VVADPLR-RLDCSPTSDGAAALV 228
Query: 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTA 303
P+F+E GG+VTAGNAS I+DGAAAL+L+S KA ELGL +A IR +A A P
Sbjct: 229 PAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DG 287
Query: 304 PSLAIPKAIANAGLEA-SQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
P A+ A+ AGL A + E EAF+ VA+ K+LG P VN GGA++LGHP+
Sbjct: 288 PVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIALGHPI 345
Query: 363 GCSGARILVTLLGVLRHK----KGKYGVGGICNGGGG-ASALVLE 402
G +GARILV L LR + + G+ +C GGGG A VLE
Sbjct: 346 GATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLE 390
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 311 bits (799), Expect = e-103
Identities = 175/400 (43%), Positives = 240/400 (60%), Gaps = 20/400 (5%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F S S + A +LG AI+ + A + P LVQEV GNV+ A +
Sbjct: 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PA QAA AG+P V T+N VC+SGM AV AA+ I LG D+V+AGGME+MSNA
Sbjct: 62 GQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNA 121
Query: 133 PKYL-AEARKGSR-LGHDT--IVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
P L ++ R G + L H I D ML DGL D + MGV AE A K+ ITR+ D
Sbjct: 122 PFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADE 181
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248
Y+++S++R I A SG F EI P +D+DEG+ K L KL P+F
Sbjct: 182 YSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTMEDLAKLPPAFD 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G +TAGN++ +SDG +ALV+ S E GL+ IA+I G+ A+ P F AP A
Sbjct: 232 KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPAT 291
Query: 309 PKAIANAGLEASQIDYYEI---NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
K + IDYY++ NEAFS+ +I + L +D E+ N +GGAV++GHP+G S
Sbjct: 292 RKLLEKQN---KSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNS 348
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQ 405
G+RI+VTL+ L+ + K G+ +C+GGGGA L LE+++
Sbjct: 349 GSRIIVTLINALKTRHMKTGLATLCHGGGGAHTLTLEMVE 388
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 309 bits (795), Expect = e-103
Identities = 163/394 (41%), Positives = 229/394 (58%), Gaps = 6/394 (1%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN 71
R+V +V RT +G F GSL V+ T LG+ + AL RA V P V V FG+V+
Sbjct: 2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTE 61
Query: 72 LGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
+R AA+ AG+P +N++C SG++A++ AAQ+I LG D+ + GG ESMS
Sbjct: 62 PRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
AP L AR G+R+G +VD M+ L D + MGV AE A K+ I+R+ QD+ A
Sbjct: 122 RAPYLLPAARWGARMGDAKLVDMMVG-ALHDPFGTIHMGVTAENVAAKYGISREAQDALA 180
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSF-K 248
+ S +R AA +G F +I PVE+ + +G+ ++ D DE + L KL+P F K
Sbjct: 181 LESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFKK 238
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
E G+VTAGNAS I+DGAAA+VL A GL+ +A++ G+A A PE+ P A
Sbjct: 239 ENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPAT 298
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR 368
KA+ AGL + +D E NEAF+ A A + LGLDP +VN +G +SLGHP+G +GA
Sbjct: 299 QKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAI 358
Query: 369 ILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
I V L L+ G+Y + +C GGG A + E
Sbjct: 359 ITVKALYELQRIGGRYALVTMCIGGGQGIAAIFE 392
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 277 bits (711), Expect = 5e-90
Identities = 158/405 (39%), Positives = 221/405 (54%), Gaps = 20/405 (4%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RD I RTP+G F G+ V A +L + I ++R + P + +V FG N
Sbjct: 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQG-YPN- 59
Query: 73 GQAPA--RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G+APA R AAL AG+P +V +++ C SG++AV+ AA +Q G D+V+AGG ESMS
Sbjct: 60 GEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS 119
Query: 131 NAPKYLAEARKGSRLG----HDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
N Y + R G R G HD + G G GM AE ++ I+R+EQ
Sbjct: 120 NVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQ 179
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG------LEKFDAAKL 240
D+ A+RS +R +AAQ +G F EI PV + +G P +VD+DE LE AKL
Sbjct: 180 DALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESL--AKL 236
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
+ +VTAGNAS +D AAA ++ + KA ELGL+ +A++ +A A P
Sbjct: 237 RPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRM 296
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVS 357
P A KA+A AGL ID E+NEAF+ +A K G D E++N +G +S
Sbjct: 297 GIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGIS 356
Query: 358 LGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LGHP+G +G RIL TLL L+ ++ +YG+ +C GGG A V E
Sbjct: 357 LGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQGLAAVFE 401
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 271 bits (696), Expect = 8e-88
Identities = 165/413 (39%), Positives = 231/413 (55%), Gaps = 38/413 (9%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
+ I RTP+G + G+LSSV A LG++ ++ + R V V +V +G AN
Sbjct: 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYG---CAN 58
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR +AL AG+P SV TTIN++C SGM AV AA++I+ G ++++AGG
Sbjct: 59 --QAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGG 116
Query: 126 MESMSNAPKYLAEARKG-SRLG--HDT-----IVDGMLKDGLWDVYNDFGMGVCAEICAN 177
+ESMS AP + +A SR DT V+ ++K Y M AE A
Sbjct: 117 VESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKA----QYGVDSMPETAENVAE 172
Query: 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE------G 231
+ I+R +QD++A+RS +R AAQ +G A EI PV + +G P ++VD+DE
Sbjct: 173 DYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETT 231
Query: 232 LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA 291
LE L KL+P F+ G+VTAGNAS ++DGAAAL+L S A + GL A+I G A
Sbjct: 232 LEA-----LAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMA 286
Query: 292 DAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQV 349
A P P+ A K +A GL Q D E+NEAF+ +A + LGL D +V
Sbjct: 287 TAGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARV 346
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA++LGHPLG SGAR+++T L L G+Y + +C G G AL +E
Sbjct: 347 NPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQGIALAIE 399
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 268 bits (686), Expect = 1e-86
Identities = 160/391 (40%), Positives = 234/391 (59%), Gaps = 4/391 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ V I RT G F+GSLS+ A L + I+ L+ + + P LV EV G V++
Sbjct: 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQ + AGIP V TINKVC SG+K+V LAA SI G N+IV+AGG E+MS
Sbjct: 63 GQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
+ + R G++ G +VD M DGL DV++ MG+ AE + + I+R EQD +A+
Sbjct: 123 -MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALS 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM-KLRPSFKEGG 251
S K+ AQ +G+F EI P+E++ + + D DE + + +++ KLRP+F + G
Sbjct: 182 SHKKAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKLRPAFDKNG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
VTAGNAS I+DGAA L++VS + L +A+I +A A P TAP A KA
Sbjct: 240 VVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKA 299
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
++ AG + ++ E+NEAF+ +I + + D E+VN +GGA+++GHP+G SG R+L+
Sbjct: 300 LSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLI 359
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TL+ LR K K G+ +C GGG A+ +E
Sbjct: 360 TLIHGLRRAKAKKGLVTLCIGGGMGMAMCVE 390
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 267 bits (685), Expect = 2e-86
Identities = 159/402 (39%), Positives = 231/402 (57%), Gaps = 22/402 (5%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL-SA 70
R+ IV ARTP+G GSL +V LG++ ++ LKRA + ++ G + A
Sbjct: 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEA 61
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AG+P +V TIN+ CSSG++++ A+ I LG ++ V+AGG ESMS
Sbjct: 62 EQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +GH + L + + Y GMG AE A K+ I+R++QD++A
Sbjct: 122 LVPM----------MGHVVRPNPRLVEAAPEYY--MGMGHTAEQVAVKYGISREDQDAFA 169
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR----GKPF---IIVDKDEGLE-KFDAAKLMK 242
+RS +R A G FA EI PV+++ K I +DEG+ L K
Sbjct: 170 VRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGK 229
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
LRP+F GSVTAGN+S +SDGAAA++L+ KA GL+ +AK R FA A PE
Sbjct: 230 LRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGI 289
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
P AIPKA+ AGLE S I +E+NEAF+ +I + LGLD E+VN +GGA++LGHPL
Sbjct: 290 GPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPL 349
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GC+GA++ ++L+ ++ + ++G+ +C GGG +A V EL+
Sbjct: 350 GCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFELL 391
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 255 bits (653), Expect = 2e-81
Identities = 160/404 (39%), Positives = 230/404 (56%), Gaps = 20/404 (4%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
R+ I RTP+G + GSLSSV A L ++ I+ L R + + +V +G AN
Sbjct: 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYG---CAN 57
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR AAL AG+P SV TT+N++C SG+ A+ +AA++I+ G D+++AGG
Sbjct: 58 --QAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGG 115
Query: 126 MESMSNAPKYLAEAR----KGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181
+ESMS AP + +A + +++ TI + + +Y M AE A + I
Sbjct: 116 VESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGI 175
Query: 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAK-L 240
+R++QD++A+RS +R AAQ SG FA EI PV + +G+P +VD+DE + L
Sbjct: 176 SREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGL 234
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL+P + G+VTAGNAS ++DGAAAL+L S GL A+I A A P
Sbjct: 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIM 294
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSL 358
P A K +A AGL Q D E+NEAF+ A+A + LGL D +VN +GGA++L
Sbjct: 295 GIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIAL 354
Query: 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
GHPLG SGAR+++T L L G+Y + +C G G AL +E
Sbjct: 355 GHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQGIALAIE 398
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 255 bits (652), Expect = 2e-81
Identities = 137/402 (34%), Positives = 205/402 (50%), Gaps = 23/402 (5%)
Query: 13 RDVCIVGVARTPMGGFLGS------LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV +V ART F +++ +L ++ I +++ +KP + ++ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
L R A +P ++ +++ C+S + V + A I G+ DIV+AGG
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDG---LWDVYNDFGMGVCAEICANKHTIT 182
+E M+ P H +L D +D+ + MG+ AE A + I
Sbjct: 122 VEHMTRTPMGDNP--------HIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIK 173
Query: 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KL 240
R+E D +++RS + A G F EI P+E+ K +VD D+ + D + KL
Sbjct: 174 REEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKK--KVVDVDQSVRP-DTSLEKL 230
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL P+FK G +TAGN+S ++ GA+ ++L+S + GL+ +AKIR F A P
Sbjct: 231 AKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIM 290
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGH 360
P A KA+ AGL ID +EINEAF+VV + K LGLDPE VN GGA+++GH
Sbjct: 291 GKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGH 350
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
PLG +GARI+ TL L+ K YGV +C GGG A+VLE
Sbjct: 351 PLGATGARIVGTLARQLQIKGKDYGVATLCVGGGQGGAVVLE 392
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 252 bits (645), Expect = 1e-79
Identities = 150/410 (36%), Positives = 220/410 (53%), Gaps = 30/410 (7%)
Query: 12 ARDVCIVGVARTPM-----GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV IV RTP+ GGF + L + ++ +++ + P V ++ G
Sbjct: 45 GDDVVIVAAYRTPICKAKRGGFKDTY----PDDLLAPVLKAVVEKTGLNPSEVGDIVVGT 100
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
VL+ +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G
Sbjct: 101 VLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 160
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+ P E R+ + +D L MG+ +E A + +TR+E
Sbjct: 161 VESMTTNPMAW-EGGVNPRVESFS----QAQDCL------LPMGITSENVAERFGVTREE 209
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPV-----EMSSGRGKPFIIVDKDEGL-EKFDAAK 239
QD A+ S ++ AA SG F EI PV + +G KP I++ D+G+ A
Sbjct: 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP-IVISVDDGIRPNTTLAD 268
Query: 240 LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
L KL+P FK+ G+ TAGN+S +SDGA A++L+ A++ GL ++ R FA P
Sbjct: 269 LAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAV 328
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
P++AIP A+ AGLE ID +EINEAF+ + K LGLDPE+VN +GGA++LG
Sbjct: 329 MGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALG 388
Query: 360 HPLGCSGARILVTLLGVL--RHKKGKYGVGGICNGGGGASALVLELMQAV 407
HPLG +GAR + TLL + R K ++GV +C G G +A V E +V
Sbjct: 389 HPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSV 438
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 246 bits (630), Expect = 5e-78
Identities = 148/404 (36%), Positives = 223/404 (55%), Gaps = 24/404 (5%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVL-SA 70
D IV RTP+G G + L + + A+ + + P L+++ G + A
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AL AG+PNSV T+N+ C+SG++AV +AA I++G D+++A G+ESMS
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +G+ + + +V +GMG+ AE A + ++R++QD++A
Sbjct: 127 MVPM----------MGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFA 176
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR-----GKPFI---IVDKDEGLEKFDAAK-LM 241
+ S ++ IAAQ +G F EI P E++ G+ + VD DEG + + L
Sbjct: 177 LESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLA 236
Query: 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKAL-ELGLQVIAKIRGFADAAQAPEWF 300
KL+P F GSVTAGN+S SDGA A++LVS KAL + L +A+ FA A PE
Sbjct: 237 KLKPVFANKGSVTAGNSSQTSDGAGAVILVSE-KALKQFNLTPLARFVSFAVAGVPPEIM 295
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGH 360
P AIP A+ AGL+ +D+ E+NEAF+ ++A + LGLDP +VN GGA++LGH
Sbjct: 296 GIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGH 355
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
PLG +GA T++ LR KYG+ +C G G +A + E +
Sbjct: 356 PLGATGAIRTATVVHGLRRTNLKYGMVTMCVGTGMGAAGIFERL 399
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 242 bits (620), Expect = 1e-76
Identities = 154/413 (37%), Positives = 216/413 (52%), Gaps = 52/413 (12%)
Query: 13 RDVCIVGVARTPMG---GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVL 68
DV IV RTPMG G G+ +V A L + + L R + P + ++ +G V
Sbjct: 2 EDVVIVDAIRTPMGRSKG--GAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCV- 58
Query: 69 SANLGQA--PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
L Q AR AAL AGIP+SV T+N++C S M+A+ AA++I G D+ + GG+
Sbjct: 59 QQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGV 118
Query: 127 ESMSNAP------------KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174
E M + P K +A+A GM MG+ AE+
Sbjct: 119 EHMGHVPMNHGVDFHPGLSKNVAKA------------AGM-------------MGLTAEM 153
Query: 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-E 233
H I+R++QD++A RS +R AA G F EI P E G + D DE +
Sbjct: 154 LGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGV-LKLFDYDEVIRP 212
Query: 234 KFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFAD 292
+ L LRP+F G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A
Sbjct: 213 ETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAV 272
Query: 293 AAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQV 349
A P P A KA+ AGL S ID +E+NEAF+ ++ K LGL E+V
Sbjct: 273 AGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKV 332
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA++LGHPLGCSGARI TLL ++ K ++G+ +C G G A V E
Sbjct: 333 NLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQGIATVFE 385
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 241 bits (618), Expect = 3e-76
Identities = 146/406 (35%), Positives = 226/406 (55%), Gaps = 27/406 (6%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL 72
+ I RTP+G + G+LSSV A LG++ ++ ++R +V + +V +G AN
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYG---CAN- 58
Query: 73 GQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
QA AR + L AG+P+ V +TIN++C SGM AV +AA++I+ G +++AGG+
Sbjct: 59 -QAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGV 117
Query: 127 ESMSNAPKYLAEAR----KGSRLGHDTI----VDGMLKDGLWDVYNDFGMGVCAEICANK 178
ESMS AP + +A + + + TI V+ ++K +Y M AE A
Sbjct: 118 ESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ----LYGVDSMPETAENVATD 173
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ++R +QD++A+RS ++ AQ G A EI PV + +G P ++V +DE +
Sbjct: 174 YNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLE 232
Query: 239 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
L KL+ + G+VTAGNAS ++DGA AL+L S A GL+ A++ G A A P
Sbjct: 233 ALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPR 292
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAV 356
P+ A K +A G+ Q D E+NEAF+ +A + LGL D +VN +GGA+
Sbjct: 293 VMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAI 352
Query: 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
+LGHPLG SGAR++ T L L G++ + +C G G A+ +E
Sbjct: 353 ALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIAIE 398
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 231 bits (590), Expect = 5e-72
Identities = 145/402 (36%), Positives = 213/402 (52%), Gaps = 35/402 (8%)
Query: 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-----NLGQAP 76
R+P G G+L+SV L + I L+++ +++V G A N+
Sbjct: 11 RSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNV---- 66
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR A L AG+P +V T+N++C+SG+ AV+ AA++I G D+ +AGG+ESMS AP +
Sbjct: 67 ARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVM 126
Query: 137 AEARK-------------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
+A G+R + IV Y + M + A + I+R
Sbjct: 127 GKAESAFSRDAKVFDTTIGARFPNPKIVAQ---------YGNDSMPETGDNVAAEFGISR 177
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMK 242
++ D +A +S + AA+ G FA EI P+E+ GR P +V +DE L K
Sbjct: 178 EDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTK 237
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
L+P F EGG VTAGNAS I+DGAAAL++ S + GL+ +A+I A A P
Sbjct: 238 LKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGI 296
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSLGH 360
P AI KA+A AGL +D EINEAF+ + K LG+ D +VN +GGA+++GH
Sbjct: 297 GPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGH 356
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
PLG SGAR+ +T L+ + +Y V +C G G A+V+E
Sbjct: 357 PLGASGARLALTAARELQRRGKRYAVVSLCIGVGQGLAMVIE 398
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 228 bits (583), Expect = 4e-71
Identities = 139/398 (34%), Positives = 216/398 (54%), Gaps = 27/398 (6%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV ART G G L+ L + ++ + R+ P L+++V G V
Sbjct: 6 IVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
AR A L + +P SV T+I++ C S +A+ AAQ++ G DIV+A G+ESM+ P
Sbjct: 66 VARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMG 125
Query: 136 LAE---ARKGSRLGHDTIVDGMLKDGLWDVYND--FGMGVCAEICANKHTITRDEQDSYA 190
A+ G LGH G+ + Y F AE+ A K+ +++D+ D +A
Sbjct: 126 SPSTLPAKNG--LGH------YKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFA 177
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLRPS 246
++S +R IAA +G F EI P+E++ G + DEG+ +FDA +KL
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGI-RFDATLEGIAGVKL--- 232
Query: 247 FKEGGSVTAGNASIISDGAAALVLVS--GVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
EGG +TA AS I DGA+ +++V+ G+KAL G++ +A+I P AP
Sbjct: 233 IAEGGRLTAATASQICDGASGVMVVNERGLKAL--GVKPLARIHHMTVIGGDPVIMLEAP 290
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
A +A+ AG++ ID YE+NEAF+ V +A K G DPE++N +GGA++LGHPLG
Sbjct: 291 LPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGA 350
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
SG +++ TL+ L+ + +YG+ +C GGG A+ ++E
Sbjct: 351 SGTKLMTTLVHALKQRGKRYGLQTMCEGGGMANVTIVE 388
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 226 bits (578), Expect = 2e-70
Identities = 143/391 (36%), Positives = 204/391 (52%), Gaps = 21/391 (5%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L+ V LG+ ++ + R + P V +V FG V QA
Sbjct: 6 IVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCV-DTIGPQAG 64
Query: 77 --ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
AR + L AG+P V T+++ C S +A+ AAQ++ G D+VVAGG+++MS P
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIP- 123
Query: 135 YLAEARK-GSRLGHDTIVDGMLKDGLWDVYNDFGMG--VCAEICANKHTITRDEQDSYAI 191
++ A G +LG + G Y D + AE+ A K I+R+E + +A+
Sbjct: 124 -ISSAMTAGEQLGFTSPFAE--SKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFAL 180
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGG 251
S +R AA +G F EI PV V DEG + K+ L+P EGG
Sbjct: 181 ESHRRAFAAIRAGRFDNEIVPVGG----------VTVDEGPRETSLEKMAGLKP-LVEGG 229
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+TA AS ISDGA+A++L S GL A+I + P + TAP A A
Sbjct: 230 RLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYA 289
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ GL ID EINEAF+ V +A K G DP +VN +GGA++LGHPLG +GA+++
Sbjct: 290 LEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMT 349
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TLL L G+YG+ +C GGG A+ ++E
Sbjct: 350 TLLHELERTGGRYGLQTMCEGGGTANVTIIE 380
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 224 bits (572), Expect = 2e-69
Identities = 139/406 (34%), Positives = 218/406 (53%), Gaps = 31/406 (7%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN- 71
+ IV ARTP+ + G+ + LG ++ A++RA + P V++V G AN
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMG---CANP 59
Query: 72 ---LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G ARQ AL AG+P +V T+N+ CSSG++ + LAAQ + G D+ VAGG+ES
Sbjct: 60 EGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVES 119
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
+S + + +G L + ++Y + M AE A ++ I+++ QD
Sbjct: 120 ISCVQN---------EMNRHMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDE 168
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPF--------IIVDKDEGLEKFDAAK- 239
Y ++S +R AAQ +G F EI P+ +++G + V DEG+ D
Sbjct: 169 YGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRP-DTTLE 227
Query: 240 -LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
+ K+R + GG +TAGNAS SDGA+A V+++ A GLQ + RGFA A P+
Sbjct: 228 GVSKIRSAL-PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPD 286
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL 358
P A+PK + AGL+ ID +E+NEAF+V + + LG+ +++N +GGA+++
Sbjct: 287 EMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAV 346
Query: 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GHP G SGAR+ L + + KY V +C GGG +A + E++
Sbjct: 347 GHPYGVSGARLTGHALIEGKRRGAKYVVVTMCIGGGQGAAGLFEVL 392
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 224 bits (573), Expect = 2e-69
Identities = 144/415 (34%), Positives = 210/415 (50%), Gaps = 46/415 (11%)
Query: 17 IVGVARTPMG-GFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSA-NLG 73
IV AR+P+G F GSL + L + + AL K + P + ++ G L G
Sbjct: 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
AR A+ G + TT+N+ CSS ++ +A +I+ G D+ ++ G+E++S
Sbjct: 66 FNMARVVAVLLGYDF-LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFA 124
Query: 134 K------------YLAEARK--------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173
K AEA+ G+ HD DG+L D VY MG AE
Sbjct: 125 KGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPD----VY--IAMGQTAE 178
Query: 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG-- 231
A I+R+EQD + +RS R A +G F EI PV + G +V D+G
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPR 233
Query: 232 ----LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKI 287
EK L+P F+ G+VTAGNA ++DGAAA+V++S KA ELGL +A+I
Sbjct: 234 AGTTYEKVSQ-----LKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARI 288
Query: 288 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE 347
+ +PE P A +A+A AG+ ID EINEAF+ + + + LG+D +
Sbjct: 289 VSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDED 348
Query: 348 QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
++N GGA++LGHP G +GARI TLL L+ +G+ +C GGG A+VLE
Sbjct: 349 KLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGMAMVLE 403
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 216 bits (552), Expect = 2e-66
Identities = 139/413 (33%), Positives = 202/413 (48%), Gaps = 55/413 (13%)
Query: 22 RTPMGGFL--GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS-ANLGQAPAR 78
RTP G GSL V +L + +E R + V +V G V + G AR
Sbjct: 11 RTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIAR 70
Query: 79 QAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE 138
A L AG+P +V IN+ C+SG++AV LAA ++ G +D+V+AGG+ESMS P
Sbjct: 71 TAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPM---- 126
Query: 139 ARKGSRLGHDTIVDGMLKDGLWDVYNDFGM-------GVCAEICANKHTITRDEQDSYAI 191
GS DG G W + G+ A++ A K+ +R++ D+YA+
Sbjct: 127 ---GS--------DG----GAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAV 171
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250
S +R AA G FA + PV+ +G I+D DE + L KL+PSF
Sbjct: 172 ESQQRAAAAWAEGYFAKSVVPVKDQNG----LTILDHDEHMRPGTTMESLAKLKPSFAMM 227
Query: 251 GSV---------------------TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRG 289
G + AGN+S I DGAAA+++ S LGL+ A+I
Sbjct: 228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVA 287
Query: 290 FADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQV 349
A P T P A KA+A AGL ID +E+NEAF+ V + + L + ++V
Sbjct: 288 TATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKV 347
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA+++GHPLG +GA IL T+L L + + + +C GGG A ++E
Sbjct: 348 NVNGGAIAMGHPLGATGAMILGTVLDELERRGKRTALITLCVGGGMGIATIIE 400
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 214 bits (547), Expect = 6e-66
Identities = 148/397 (37%), Positives = 208/397 (52%), Gaps = 22/397 (5%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSA 70
DV IV RTPMG G+ + A L + + L R V P V+++++G V +
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AAL A IP++ T+N++C S M+A+ AA++I G D+ + GG+E M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
+ P H GM MG+ AE+ H I+R++QD++A
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGM-------------MGLTAEMLGKMHGISREQQDAFA 167
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSFK- 248
RS R AA G F EI P + G D DE + + L LRP+F
Sbjct: 168 ARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAALRPAFDP 226
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A A P P A
Sbjct: 227 KNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPAT 286
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVSLGHPLGCS 365
KA+ AGL S ID +E+NEAF+ A+ K LGL E+VN +GGA++LGHPLGCS
Sbjct: 287 QKALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCS 346
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
GARI TLL ++ K +G+ +C G G A V E
Sbjct: 347 GARISTTLLNLMEQKDATFGLATMCIGLGQGIATVFE 383
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 210 bits (537), Expect = 8e-64
Identities = 154/436 (35%), Positives = 213/436 (48%), Gaps = 52/436 (11%)
Query: 11 KARDVCIVGVARTPMGGFL---GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNV 67
AR V IV ARTP FL G SA+ L A L R P + EV G
Sbjct: 1 MARPVYIVDGARTP---FLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA 57
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
+ + AR AL G V T+ + C+SGM+A+ AA +I LG D+V+AGG+E
Sbjct: 58 MPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVE 117
Query: 128 SMSNAP--------KYLAE------------ARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167
+MS+AP ++LA A R + V G+L+ GL D
Sbjct: 118 AMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLR-GLTDPVVGLN 176
Query: 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVD 227
MG AE+ A++ ITR++ D+YA RS +R AAQ G E+ P + GK + D
Sbjct: 177 MGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFY---D 230
Query: 228 KDEGL-EKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIA 285
D+G+ KL KL+P F + G VTAGN+S I+DGA L+L S + GL +
Sbjct: 231 HDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLG 290
Query: 286 KIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQ------ 339
+I AA P P A + GL +D +EINEAF+ +A
Sbjct: 291 RIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADE 350
Query: 340 ----KLLGL-------DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388
+ LGL D E++N GGA++LGHP+G SGARI++ LL L+ + K G+
Sbjct: 351 EYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRGTKRGIAA 410
Query: 389 ICNGGGGASALVLELM 404
IC GGG A++LE +
Sbjct: 411 ICIGGGQGGAMLLERV 426
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 201 bits (512), Expect = 1e-60
Identities = 134/394 (34%), Positives = 196/394 (49%), Gaps = 22/394 (5%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV RTP+G G LS + A +L L RA + P V++V G V A
Sbjct: 6 IVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
R A L AG+P V TTI+ C S +A L A I G D+ +A G+E+MS P
Sbjct: 66 ITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPL- 124
Query: 136 LAEARKGSRLGHDTIVDGMLKDGLW--DVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
G+ G G+ + W D+ N F AE A + ITR++ D++ +RS
Sbjct: 125 ------GANAGPGR---GLPRPDSWDIDMPNQFE---AAERIAKRRGITREDVDAFGLRS 172
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSG--RGKP---FIIVDKDEGLEKFDAAKLMKLRPSFK 248
+R A G F EI+PV+ G+P +V +D+GL L L+P
Sbjct: 173 QRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVL- 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
EGG TAG +S ISDGAAA++ + +A LGL+ A+I A P + P A
Sbjct: 232 EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQAT 291
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR 368
K + AG++ ID EINEAF+ V ++ ++ D ++VN +GGA++LGHP+G +GAR
Sbjct: 292 AKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGAR 351
Query: 369 ILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
++ T L L + +C GG ++ ++E
Sbjct: 352 LITTALHELERTDKSTALITMCAGGALSTGTIIE 385
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 188 bits (480), Expect = 3e-56
Identities = 119/389 (30%), Positives = 190/389 (48%), Gaps = 32/389 (8%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L +L + + K ++ + +V GNV+ G
Sbjct: 5 IVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GMERE-IDDVILGNVVGP--GGNV 59
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR +AL AG+ + TI++ C +G++A+ A IQ G +AGG+ES S +P
Sbjct: 60 ARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP--- 116
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+ +R +TI D MGV AE A ++ ITR+ QD YA S+KR
Sbjct: 117 --FQNRARFSPETI-------------GDPDMGVAAEYVAERYNITREMQDEYACLSYKR 161
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256
+ A G EI ++D+ E + + +P+F G+VTAG
Sbjct: 162 TLQALEKGYIHEEILSFNG---------LLDESIKKEMNYERIIKRTKPAFLHNGTVTAG 212
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAG 316
N+ ++DGA A++++ +A +LG + + + A P T P A+ K +
Sbjct: 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMN 272
Query: 317 LEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376
++ IDY+EINEAF+ +A K L + E++N +GGA++LGHP G SGA ++ L
Sbjct: 273 MKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332
Query: 377 LRHKKGKYGVGGICNGGGGASALVLELMQ 405
+ + KYG+ + GGG AL+ E ++
Sbjct: 333 AKREDMKYGIATLGIGGGIGLALLFEKVE 361
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 189 bits (481), Expect = 1e-55
Identities = 125/432 (28%), Positives = 206/432 (47%), Gaps = 48/432 (11%)
Query: 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ + IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 3 QGDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQ- 61
Query: 71 NLGQAP--ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+ +AP AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S
Sbjct: 62 -MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADS 120
Query: 129 MSNAP----KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCA 172
S P K LA A K LG + + L+D + + MG A
Sbjct: 121 SSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTA 180
Query: 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI---IVDKD 229
E A + I+R+EQD+ A RS + A G E+ + + +P + D
Sbjct: 181 EQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK-QPLEEDNNIRGD 239
Query: 230 EGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIR 288
LE + KLRP+F ++ G+VTA N++ ++DGAAA++L+S +A LGL + +R
Sbjct: 240 STLEDYA-----KLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLR 294
Query: 289 GFADAAQAPEW-FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLG---- 343
+A AA P+ A P A+ AGL + + +++EAF+ +AN ++
Sbjct: 295 SYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERF 354
Query: 344 -------------LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390
+D + N GG+++ GHP +GAR++ L LR + G G+ C
Sbjct: 355 AREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGLGLTTAC 414
Query: 391 NGGGGASALVLE 402
GG +A+VLE
Sbjct: 415 AAGGLGAAMVLE 426
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 176 bits (446), Expect = 5e-51
Identities = 127/425 (29%), Positives = 189/425 (44%), Gaps = 73/425 (17%)
Query: 18 VGVARTPMGGFLGSLSSVS---ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
G A T G F G + + A + G+ AI AL+ A V V+E G VL A GQ
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQ 60
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A+QAA+ AG +N +C SG++A+ LA Q I G + ++AGG E M + +
Sbjct: 61 NCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAE 120
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
A + + + N +GM R D++A+
Sbjct: 121 NNA-----------------KEKHIDVLINKYGM--------------RACPDAFALAGQ 149
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL---MKLRPSFKEGG 251
AA+ G F E A + +G I D DE ++ D A L KLRP+F +
Sbjct: 150 AGAEAAEKDGRFKDEFAKFGVKGRKGD--IHSDADEYIQFGDEASLDEIAKLRPAFDKED 207
Query: 252 SVTAGNASIISDGAAALVLVS-------GVKALELGLQVIAKIRGFADAAQAPEWFT--- 301
+TAGNA ++DGAAA +L+S G+++ +Q + I A + +
Sbjct: 208 FLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVG 267
Query: 302 -TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQ------------ 348
P A KA+ AGL +D E ++AF+ A A + LGL PE
Sbjct: 268 GDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNT 327
Query: 349 ------VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG-----ICNGGGGAS 397
+N +GGA+++GHP+G SGA I L L+ + GK G +C GGGG +
Sbjct: 328 YGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGA 387
Query: 398 ALVLE 402
A+ +E
Sbjct: 388 AMCIE 392
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 166 bits (423), Expect = 2e-47
Identities = 128/422 (30%), Positives = 198/422 (46%), Gaps = 42/422 (9%)
Query: 14 DVCIVGVARTPMG-GFLG--SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ I+ RTP G G +G +L+ + L + ++ +R + V ++ + S+
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWST--SS 60
Query: 71 NLGQAPA---RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
G+ R AAL AG T+++ C G+ +V LAA I G+ D+V+AGG E
Sbjct: 61 QRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTE 120
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
MS A A + G + G L ++ GVC + A ITR+ D
Sbjct: 121 MMSYTA---AMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALD 177
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE-GLEKFDAAKLMKLRPS 246
+ + S +R A G F + PV G + +D +E + A L L+P+
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPVYRDDGS----VALDHEEFPRPQTTAEGLAALKPA 233
Query: 247 FK--------EGGSV------------------TAGNASIISDGAAALVLVSGVKALELG 280
F + G+ AGN+S + DGAAAL+L S A + G
Sbjct: 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHG 293
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
L+ A+I A+ P AP A K +A AGL ID +EINEAF+VVA +
Sbjct: 294 LKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIR 353
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
L LD ++VN +GGA++LGHP+G +G+ ++ T+L L + K G+ +C GG A A++
Sbjct: 354 DLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGLKRGLVTMCAAGGMAPAII 413
Query: 401 LE 402
+E
Sbjct: 414 IE 415
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 157 bits (400), Expect = 3e-47
Identities = 63/122 (51%), Positives = 85/122 (69%)
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
L+ +A+IR +A P P+ AIPKA+ AGL + ID +EINEAF+ A+A K
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
LG+DPE+VN +GGA++LGHPLG SGARILVTLL L+ + GKYG+ +C GGG A++
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGGKYGLATLCIGGGQGVAMI 120
Query: 401 LE 402
+E
Sbjct: 121 IE 122
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 163 bits (414), Expect = 5e-46
Identities = 123/423 (29%), Positives = 197/423 (46%), Gaps = 38/423 (8%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
+ IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAP 68
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP- 133
AR+ LG G+ ++ + C++ ++ + A+SI G DI +AGG +S S P
Sbjct: 69 NIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPI 128
Query: 134 ---KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCAEICANK 178
K LA + K LG + + LKD + + MG AE A
Sbjct: 129 GVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKT 188
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ITR EQD+ A RS A G A E+ K +I D + A
Sbjct: 189 YGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPP--YKQWIAEDNNI-RHNSTLA 245
Query: 239 KLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-DAAQA 296
KLRP+F ++ GSVTA N++ ++DGAAA++L+ +A ELG++ + IR +A A
Sbjct: 246 GYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDV 305
Query: 297 PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLG------------- 343
+ PS A P A+ AGL S + +++EAF+ +AN ++
Sbjct: 306 WQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSK 365
Query: 344 ----LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399
+D + N GG+++ GHP +GAR++ L L+ + G G+ C GG +A+
Sbjct: 366 AMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGGLGLNTACAAGGLGAAM 425
Query: 400 VLE 402
+LE
Sbjct: 426 ILE 428
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 138 bits (349), Expect = 1e-36
Identities = 125/443 (28%), Positives = 194/443 (43%), Gaps = 74/443 (16%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA- 70
R V I+G R P G+ + S + + A++ + R ++ + EV G VL
Sbjct: 6 VRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHS 65
Query: 71 ---NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
NL R+ LG+ + + + C +G++A +L A I LG D +AGG++
Sbjct: 66 RDFNL----TRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVD 121
Query: 128 SMSNAP--------KYLAEARKG---------------SRLGHDTIVDGMLKDGLWDVYN 164
+ S+AP K L E + L + +G + GL
Sbjct: 122 TTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGL----- 176
Query: 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224
MG A I A + I+R+ QD A S + AA + G F I P F+
Sbjct: 177 --SMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITP----------FL 224
Query: 225 IVDKDEGLEK-FDAAKLMKLRPSF--KEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281
+ +D L KL KL+P F ++TAGN++ ++DGA+ ++L S A E GL
Sbjct: 225 GLTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGL 284
Query: 282 QVIAKIRGFADAA-----QAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAI 336
V+A + A+ A E AP+ A+P+ +A GL D+YEI+EAF+ +
Sbjct: 285 PVLAYLV-DAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVL 343
Query: 337 ANQKL----------LGL-------DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379
A K LGL D ++N +G +++ GHP +G RI+ TL +L
Sbjct: 344 ATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE 403
Query: 380 KKGKYGVGGICNGGGGASALVLE 402
K G+ IC GG +LE
Sbjct: 404 KGSGRGLISICAAGGQGVTAILE 426
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 77.5 bits (191), Expect = 4e-16
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA----DAAQAPEWFTTAPSLAIPK 310
+ DGAAA V+ S AL G A+I A A+ P + A K
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAH---GGAVSLGHPLGCSGA 367
A+ AGL S IDY E + + + A + LGLDP+ V + + GHPLG +G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 368 RILVTLLGVLRHKKGKY-------GVGGICNGGGGASALVL 401
IL LL +L H+ + GG +A+VL
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
Score = 55.1 bits (133), Expect = 1e-08
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94
++A++LG A E A+ A + + V G + A Q A GI +
Sbjct: 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYS 63
Query: 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+N+ C++G+ A+ LA Q +Q G DIV+AGG E
Sbjct: 64 VNQACATGLTALALAVQQVQNGKADIVLAGGSEE 97
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 69.6 bits (171), Expect = 5e-13
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAA-----QAPEWFTTAPS--LAIPKA 311
+SDGAAA+VL S +A EL + + I G A+ + F + + LA +A
Sbjct: 202 CPVSDGAAAVVLASEERARELTDRPV-WILGVGAASDTPSLSERDDFLSLDAARLAARRA 260
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQ------------------VNAHG 353
AG+ ID E+ + F++ + + LG + VN G
Sbjct: 261 YKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSG 320
Query: 354 GAVSLGHPLGCSGARILVTLLGVLRHKKGKY-----GVGGICNGGGGASALV 400
G +S GHPLG +G V + LR + G VG N GG SA V
Sbjct: 321 GLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARVGLAHNIGGTGSAAV 372
Score = 59.6 bits (145), Expect = 1e-09
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA 77
VGV TP G S S +L + A AL A ++P + V GN P
Sbjct: 1 VGVGMTP----FGRRSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPG 56
Query: 78 RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A G+ T + +SG AV AA +I G+ D+V+ G E MS+ P
Sbjct: 57 ALIAEYLGLLGKPA-TRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPT 112
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 52.3 bits (126), Expect = 2e-07
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF---ADAAQ--APEWFTTAPSLAIPKAIAN 314
+I +GA ALVL AL G ++ A+I G+ +DA AP A+ A+A+
Sbjct: 229 VIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALAD 288
Query: 315 AGLEASQIDYYEIN-------EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
AGL IDY IN ++A +++ G + + GH LG +GA
Sbjct: 289 AGLTPEDIDY--INAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGA 346
Query: 368 RILVTLLGVLRHKK 381
+ L LR
Sbjct: 347 VEAIISLLALRDGI 360
Score = 34.2 bits (79), Expect = 0.12
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 13/79 (16%)
Query: 51 RANVKPLLVQEVFFGNVLSANLGQAPARQAALGA-GIPNSVVCTTINKVCSSGMKAVMLA 109
R + P LV N+ + N+ G G + V C++G A+ A
Sbjct: 125 RKRISPFLV-PKMLPNLAAGNVAIV------FGLKGPNYTPVTA-----CATGAHAIGDA 172
Query: 110 AQSIQLGINDIVVAGGMES 128
+ I+LG D+V+AGG E+
Sbjct: 173 VRLIRLGKADVVIAGGAEA 191
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 50.7 bits (122), Expect = 6e-07
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS--- 69
RDV I+GV +T G L VS L A AL+ A + + ++ GN+ +
Sbjct: 2 RDVAIIGVGQTK----FGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 70 ---ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
++ A A L A IP T + C+SG A+ A ++ G D+V+A G+
Sbjct: 58 VSQEHIAALIADYAGL-APIP----ATRVEAACASGGAALRQAYLAVASGEADVVLAAGV 112
Query: 127 ESMSNAP 133
E M++ P
Sbjct: 113 EKMTDVP 119
Score = 49.9 bits (120), Expect = 1e-06
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 34/176 (19%)
Query: 258 ASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTT--APSLAIPK 310
S I+DGAAA++L S KA E + I+ A+ + FTT A +A K
Sbjct: 208 CSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEK 266
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLG----------LDPEQ--------VNAH 352
A AG+E ID E+++ F++ I + LG Q VN
Sbjct: 267 AYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPS 326
Query: 353 GGAVSLGHPLGCSGARILVTLLGVLRHKKGKY-------GVGGICN-GGGGASALV 400
GG + GHP+G +G V ++ LR + K G G N GG G +A+V
Sbjct: 327 GGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNVGGTGHTAVV 382
>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated.
Length = 398
Score = 50.4 bits (121), Expect = 9e-07
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 29/139 (20%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAA------QAPEW-FTTAPSLAIP--KA 311
+SDGAAA ++ + A LG + ++ A Q W + P+ I KA
Sbjct: 216 VSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKA 275
Query: 312 IANAGLE--ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNA 351
AG+ ++ E+++ FS+ + + LGL
Sbjct: 276 YREAGITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQI 335
Query: 352 HGGAVSLGHPLGCSGARIL 370
GG GHP+G SG R+L
Sbjct: 336 DGGLKCFGHPIGASGLRML 354
Score = 30.4 bits (69), Expect = 2.1
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 12/130 (9%)
Query: 6 PSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFG 65
+ IK V I+G+ T G A L A AL A ++P + +FG
Sbjct: 1 MATGIK-DKVAILGMGCTKFGERWD----AGAEDLMVEAFLEALADAGIEPKDIDAAWFG 55
Query: 66 ---NVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVV 122
+ + + P +A IP T + C++G +A A ++ G DI +
Sbjct: 56 THYDEIGSGKSGTPLSRALRLPNIP----VTRVENFCATGSEAFRGAVYAVASGAYDIAL 111
Query: 123 AGGMESMSNA 132
A G+E + +
Sbjct: 112 ALGVEKLKDT 121
>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 49.9 bits (120), Expect = 1e-06
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 41/184 (22%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---------TAPSLAIP 309
S++SDGAAALVL A L V F A ++ P A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV-----RFRARAHVNDFLPLSRRDPLAFEGPRRAWQ 267
Query: 310 KAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNA 351
+A+A AG+ + + E ++ F++ + + +GL P VN
Sbjct: 268 RALAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNP 327
Query: 352 HGGAVSLGHPLGCSG-------ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GG + GHP+G +G A L G ++ K + G+ N GG A A + ++
Sbjct: 328 SGGLKAKGHPIGATGVSMHVLAAMQLTGEAGGMQIPGAK--LAGVFNMGGAAVANYVSIL 385
Query: 405 QAVR 408
+ V+
Sbjct: 386 ERVK 389
Score = 33.4 bits (77), Expect = 0.22
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 5/121 (4%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
IVG A TP G L + + L AL A + V +F G+ +
Sbjct: 3 TASIVGWAHTP----FGKLDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSP 58
Query: 74 QA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
Q PA T + C++G AV A +I+ G IV+ G E M+
Sbjct: 59 QDFPASLVLQADPALRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTAT 118
Query: 133 P 133
P
Sbjct: 119 P 119
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 49.8 bits (119), Expect = 1e-06
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 25/152 (16%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRG------FADAAQAPEWFT-TAPSLAIP 309
++ ISDG+A + S K EL + I G +A A+ EW A LA
Sbjct: 205 DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAAR 264
Query: 310 KAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL-------------DPEQ-----VNA 351
+A A + + I+ +++AF++ I + LG E+ VN
Sbjct: 265 QAYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNL 324
Query: 352 HGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383
GG + GHPLG +G ++ + LR + GK
Sbjct: 325 FGGLKAKGHPLGATGLSMIYEITKQLRDEAGK 356
Score = 33.3 bits (76), Expect = 0.25
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 19/125 (15%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
R V ++GV + G VS +L +I+ AL A V ++ V +
Sbjct: 1 RRVAVIGVGNSK----FGRRDDVSVQELAWESIKEALNDAGVSQTDIELVV--------V 48
Query: 73 GQAPARQAALGAGIPNSVVCTTINKV-------CSSGMKAVMLAAQSIQLGINDIVVAGG 125
G R L + KV C++G+ A + A ++ G+ D+ +A G
Sbjct: 49 GSTAYRGIELYPAPIVAEYSGLTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVG 108
Query: 126 MESMS 130
++ M+
Sbjct: 109 VDKMT 113
>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional.
Length = 391
Score = 49.1 bits (118), Expect = 2e-06
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
V + GV TP F +S + + A AL A + VQ+ + G V
Sbjct: 1 NKVFVAGVGMTP---FEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVY---- 53
Query: 73 GQAPARQAAL---G-AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G + + Q AL G GIP +V +N CS+G A+ LA Q+++ G D +A G E
Sbjct: 54 GDSTSGQRALYEVGMTGIP--IV--NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQ 109
Query: 129 M 129
M
Sbjct: 110 M 110
Score = 37.2 bits (87), Expect = 0.015
Identities = 40/137 (29%), Positives = 54/137 (39%), Gaps = 36/137 (26%)
Query: 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF--TTAPSL--------AIPKA 311
+ GAAA ++ S A + GL +I A P F + L A +
Sbjct: 214 TCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQV 273
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKL----LGLDPEQ------------------V 349
AG+ ID E+++ FS AN+ L LGL PE V
Sbjct: 274 YEQAGIGPEDIDVVELHDCFS----ANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVV 329
Query: 350 NAHGGAVSLGHPLGCSG 366
N GG +S GHPLG +G
Sbjct: 330 NPSGGLLSKGHPLGATG 346
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes;
Family of enzymes that catalyze the formation of a new
carbon-carbon bond by a decarboxylating Claisen-like
condensation reaction. Members are involved in the
synthesis of fatty acids and polyketides, a diverse
group of natural products. Both pathways are an
iterative series of additions of small carbon units,
usually acetate, to a nascent acyl group. There are 2
classes of decarboxylating condensing enzymes, which can
be distinguished by sequence similarity, type of active
site residues and type of primer units (acetyl CoA or
acyl carrier protein (ACP) linked units).
Length = 332
Score = 46.1 bits (109), Expect = 2e-05
Identities = 40/193 (20%), Positives = 64/193 (33%), Gaps = 11/193 (5%)
Query: 199 AAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT---A 255
AA L A +A + +G+ + +E D S E S T A
Sbjct: 94 AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAA 153
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-----DAAQAPEWFTTAPSLAIPK 310
+ + DGA ALV+ AL G + A+I G A A + A +
Sbjct: 154 ADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKE 213
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGA 367
A+A AGL IDY + + + + L + G+ +
Sbjct: 214 ALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVV 273
Query: 368 RILVTLLGVLRHK 380
+ + +L H
Sbjct: 274 LAVDEAVLMLEHG 286
Score = 32.2 bits (73), Expect = 0.48
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESM 129
++ C+ + A+ LAA ++Q G DIV+AGG E +
Sbjct: 86 HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEEL 126
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 381
Score = 45.4 bits (108), Expect = 3e-05
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF-----ADAAQAPEWFTTAPSLAIPKAIAN 314
++ +G A LVL S A + G ++ +I GF A APE + AI + +A
Sbjct: 207 VLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLAR 266
Query: 315 AGLEASQIDYY-------EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
+GL IDY +N+ I L P +V + GH LG SGA
Sbjct: 267 SGLTPEDIDYIHAHGTATRLNDQREANLIQA-----LFPHRVAVSSTKGATGHTLGASGA 321
Query: 368 RILVTLLGVLRHKK 381
+ L LRH++
Sbjct: 322 LGVAFSLLALRHQQ 335
Score = 31.2 bits (71), Expect = 0.94
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 72 LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
L A AA G V+ C++G+ A+ + IQ G V+AG +E+
Sbjct: 121 LPHQAAIAAARQIGTQGPVLAPM--AACATGLWAIAQGVELIQTGQCQRVIAGAVEA 175
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP)
synthase (KAS), type I and II. KASs are responsible for
the elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen
condensation of malonyl-acyl carrier protein (ACP) with
acyl-ACP.
Length = 406
Score = 43.7 bits (104), Expect = 1e-04
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 44/135 (32%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-------LAIP 309
++ +GA LVL S A G ++ A+I G+ DA TAP A+
Sbjct: 228 VLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHI-----TAPDPDGEGAARAMR 282
Query: 310 KAIANAGLEASQIDYYEIN------------EAFSVVAIANQKLLGLDPEQVNAHGGAVS 357
A+A+AGL IDY IN E+ AI +++ G ++V VS
Sbjct: 283 AALADAGLSPEDIDY--INAHGTSTPLNDAAES---KAI--KRVFGEHAKKV-----PVS 330
Query: 358 -----LGHPLGCSGA 367
GH LG +GA
Sbjct: 331 STKSMTGHLLGAAGA 345
Score = 42.9 bits (102), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 75 APARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
A Q A+ G+ PN V T C+SG A+ AA+ I+LG D+V+AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
>gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional.
Length = 352
Score = 43.5 bits (103), Expect = 1e-04
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW----FTTAPSLAIPKAIANAG 316
I+DGAAA+VL +G +A EL + A I G ++P T +PS A+ A G
Sbjct: 204 ITDGAAAVVLAAGDRAREL-RERPAWITGIEHRIESPSLGARDLTRSPSTALAAEAA-TG 261
Query: 317 LEASQIDYYEINEAFSVVAIANQKLLGL-DPEQVNAHGGAVSLGHPLGCSG-ARI 369
+A +D E++ F+ + ++ LGL D +VN GGA++ +P+ +G RI
Sbjct: 262 GDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERI 315
>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional.
Length = 403
Score = 43.1 bits (102), Expect = 2e-04
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 41/178 (23%)
Query: 259 SIISDGAAALVLVSGVKALEL-GLQVIAKIRGF-------------ADAAQAPEWFTTAP 304
S ++DG A +VL S + + I +I+G+ +A P P
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL---P 276
Query: 305 SL--AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE--------------- 347
+ A+ A AG+ +D +E+++ F+ +GL
Sbjct: 277 HVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIG 336
Query: 348 ---QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG----GGASA 398
+N GG + GHP+G SG R+L+ + G Y V G G GG++
Sbjct: 337 GRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTAGDYQVEGAKTFGTLNIGGSTT 394
Score = 29.7 bits (67), Expect = 3.2
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 44 AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-------CTTIN 96
++ L A V ++ V GN G+ A Q LG +P +V +
Sbjct: 33 VVDGTLAAAGVDADDIEVVHVGNFF----GELFAGQGHLG-AMPATVHPALWGVPASRHE 87
Query: 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGS 143
C+SG A + A ++ G D+ + G+E M P +A G+
Sbjct: 88 AACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGA 134
>gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3;
Provisional.
Length = 326
Score = 42.2 bits (99), Expect = 3e-04
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91
SS S TKL + A AL +A++ PL + + +L G A QA +GA V
Sbjct: 47 SSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRA---V 103
Query: 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
I CS + A++ A Q IQ G ++ G +++S
Sbjct: 104 AFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLS 142
>gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional.
Length = 438
Score = 41.8 bits (98), Expect = 5e-04
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 44/186 (23%)
Query: 259 SIISDGAAALVLVSGVKALELGLQ----VIAKIRGFA--------DAAQAPEWFTTAPSL 306
S +SDG A LVL S ++GL + +I+ A D A FT+
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS--RA 313
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL-DPEQ----------------- 348
A KA++ AG++ S + E+++ F++ + + LG+ +
Sbjct: 314 AAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIP 373
Query: 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG---------VGGICNGGGGASAL 399
VN GG +S GHP+G +G + ++ V R KG+ G +G N GG
Sbjct: 374 VNTGGGLLSFGHPVGATGVK---QIMEVYRQMKGQCGEYQMKNIPALGATLNMGGDDKTA 430
Query: 400 VLELMQ 405
V ++Q
Sbjct: 431 VSTVLQ 436
Score = 29.1 bits (65), Expect = 5.2
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 13/98 (13%)
Query: 55 KPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCTTINK-------VCSSGMKAV 106
K LV +V GN L Q AA+G+ + + K C+SG AV
Sbjct: 68 KAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAV 127
Query: 107 MLAAQSIQLGINDIVVAGGMESMSNAP-----KYLAEA 139
A +++ G +DI + G+E + YLA A
Sbjct: 128 QSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARA 165
>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal
domain. The structure of beta-ketoacyl synthase is
similar to that of the thiolase family (pfam00108) and
also chalcone synthase. The active site of beta-ketoacyl
synthase is located between the N and C-terminal
domains. The N-terminal domain contains most of the
structures involved in dimer formation and also the
active site cysteine.
Length = 243
Score = 37.2 bits (87), Expect = 0.010
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 63 FFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVV 122
+ +V + + LG P+ V T CSS + A+ A +SI+ G D+ +
Sbjct: 138 WMPSVAAGRISYR------LGLRGPSVTVDT----ACSSSLVALHAAVRSIRRGECDLAL 187
Query: 123 AGGMESMSN 131
AGG+E+
Sbjct: 188 AGGVEAPLT 196
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 411
Score = 37.1 bits (87), Expect = 0.013
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
+I C++G A+ AA+ I G D++VAGG E+
Sbjct: 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITP 195
Score = 36.3 bits (85), Expect = 0.024
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 34/130 (26%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-------LAIP 309
++ +GA LVL A G ++ A++ G+ DA + TAP+ A+
Sbjct: 229 VMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDA-----YHMTAPAPDGEGAARAMK 283
Query: 310 KAIANAGLEASQIDYY-------EINEAFSVVAIANQKLLGLDPEQVNAHGGAVS----- 357
A+ +AG+ IDY + AI +++ G +V AVS
Sbjct: 284 LALKDAGINPEDIDYINAHGTSTPAGDKAETQAI--KRVFGEHAYKV-----AVSSTKSM 336
Query: 358 LGHPLGCSGA 367
GH LG +GA
Sbjct: 337 TGHLLGAAGA 346
>gnl|CDD|180434 PRK06158, PRK06158, thiolase; Provisional.
Length = 384
Score = 36.9 bits (86), Expect = 0.015
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 260 IISDGAAALVLVSGVKALELGLQVI-----AKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
+++DGA A+V+V +A +L + A + P+ TA + + P+A A
Sbjct: 207 LVTDGAGAVVMVRADRARDLPRPPVYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAM 266
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAV 356
AGL + ID E+ +AF++ I + LG + VN +GG +
Sbjct: 267 AGLTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGL 326
Query: 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGG----ICNGGGG 395
S HP G G +L+ + LR + G+ V G + +G GG
Sbjct: 327 SCVHP-GMYGLFLLIEAVRQLRGEAGERQVAGAEVALAHGNGG 368
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II,
FabF) is involved in the condensation step of fatty acid
biosynthesis in which the malonyl donor group is
decarboxylated and the resulting carbanion used to
attack and extend the acyl group attached to the acyl
carrier protein. Most genomes encoding fatty acid
biosynthesis contain a number of condensing enzymes,
often of all three types: 1, 2 and 3. Synthase 2 is
mechanistically related to synthase 1 (KAS-I, FabB)
containing a number of absolutely conserved catalytic
residues in common. This model is based primarily on
genes which are found in apparent operons with other
essential genes of fatty acid biosynthesis
(GenProp0681). The large gap between the trusted cutoff
and the noise cutoff contains many genes which are not
found adjacent to genes of the fatty acid pathway in
genomes that often also contain a better hit to this
model. These genes may be involved in other processes
such as polyketide biosyntheses. Some genomes contain
more than one above-trusted hit to this model which may
result from recent paralogous expansions. Second hits to
this model which are not next to other fatty acid
biosynthesis genes may be involved in other processes.
FabB sequences should fall well below the noise cutoff
of this model [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 407
Score = 37.1 bits (87), Expect = 0.016
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 28/127 (22%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF---ADA----AQAPEWFTTAPSLAIPKAI 312
++ +GA LVL A G ++ A+I G+ DA A APE + A+ A+
Sbjct: 228 VMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPE--GEGAARAMRAAL 285
Query: 313 ANAGLEASQIDYY-------EINEAFSVVAIANQKLLGLDPEQVNAHGGAVS-----LGH 360
+AG+ +DY + + AI +++ G +A+ AVS GH
Sbjct: 286 KDAGINPEDVDYINAHGTSTPLGDKAETKAI--KRVFG-----DHAYKLAVSSTKSMTGH 338
Query: 361 PLGCSGA 367
LG +GA
Sbjct: 339 LLGAAGA 345
Score = 36.7 bits (86), Expect = 0.018
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 82 LGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
GA PN V T C++G A+ A + IQ G D+++AGG E+
Sbjct: 148 YGAKGPNHAVVTA----CATGTHAIGDAFRLIQRGDADVMIAGGAEA 190
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase.
Length = 437
Score = 36.7 bits (85), Expect = 0.018
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 32/130 (24%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS-------LAIPKAI 312
+I +GA LVL A G ++ A++RG+ + A T P LA+ +A+
Sbjct: 252 VIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDA--HHITQPHEDGRGAVLAMTRAL 309
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQV--------NAHGGAVSL------ 358
+GL +Q+DY V A A LG E +A G ++
Sbjct: 310 QQSGLHPNQVDY--------VNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGA 361
Query: 359 -GHPLGCSGA 367
GH LG +GA
Sbjct: 362 TGHLLGAAGA 371
Score = 30.5 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
PN T C++G ++ A + IQ G D++VAGG ES +A
Sbjct: 176 PNHAAVTA----CATGAHSIGDAFRMIQFGDADVMVAGGTESSIDA 217
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty
acids into a large variety of different products, called
polyketides, by successive decarboxylating Claisen
condensations. PKSs can be divided into 2 groups,
modular type I PKSs consisting of one or more large
multifunctional proteins and iterative type II PKSs,
complexes of several monofunctional subunits.
Length = 421
Score = 36.4 bits (85), Expect = 0.026
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-----LAIPKA 311
+ +G +VL AL G ++ A IRG A D TAPS I +A
Sbjct: 232 VRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKG---ITAPSGEAQAALIRRA 288
Query: 312 IANAGLEASQIDYYE 326
A AG++ S IDY E
Sbjct: 289 YARAGVDPSDIDYVE 303
Score = 31.8 bits (73), Expect = 0.60
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
T++ CSS + A+ LA QS++ G D+ + GG
Sbjct: 165 TVDTACSSSLVALHLACQSLRSGECDLALVGG 196
>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase;
Provisional.
Length = 421
Score = 36.2 bits (84), Expect = 0.026
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIAN 314
++ +GA LVL AL G ++ A+IRG+ ++ A P + A+ +
Sbjct: 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKD 295
Query: 315 AG-LEASQIDYY-------EINEAFSVVAIANQKLLGLDPEQ---VNAHGGAVSLGHPLG 363
+ + +DY I + + AI +K+ G V++ G LGH LG
Sbjct: 296 GANININDVDYVNAHATSTPIGDKIELKAI--KKVFGDSGAPKLYVSSTKG--GLGHLLG 351
Query: 364 CSGA 367
+GA
Sbjct: 352 AAGA 355
>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein
synthase; Validated.
Length = 410
Score = 35.8 bits (83), Expect = 0.041
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPSLAIPKAIANAG 316
I + A+VL S A G + AK+ G++ DA + P+ I A+ AG
Sbjct: 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAG 295
Query: 317 LEASQIDY 324
L IDY
Sbjct: 296 LGPEDIDY 303
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 1061
Score = 35.5 bits (82), Expect = 0.056
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKG 142
T++ CSS + AV LA QS++LG D+ +AGG+ + + + G
Sbjct: 168 VTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGG 217
Score = 32.8 bits (75), Expect = 0.36
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL-----AIPKAIANAG 316
+GA +VL A G ++ A IRG A TAP+L I +A+A+AG
Sbjct: 238 GEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAG 297
Query: 317 LEASQIDYYE 326
++ + + Y E
Sbjct: 298 IDPATVQYVE 307
>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I;
Reviewed.
Length = 392
Score = 35.2 bits (82), Expect = 0.060
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 71 NLGQAPAR--QAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
LG + A +A LG P TI+ CSS K A + ++ G+ D + GG++S
Sbjct: 135 ELG-SLADFLRAYLGLSGP----AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS 189
Query: 129 MS 130
+
Sbjct: 190 LC 191
Score = 30.6 bits (70), Expect = 1.6
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 306 LAIPKAIANAGLEASQIDYYEIN 328
LA+ +A+A+AGL + I Y IN
Sbjct: 264 LAMQQALADAGLAPADIGY--IN 284
>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 405
Score = 35.0 bits (81), Expect = 0.070
Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 37/108 (34%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-----LAIPKA 311
+I +GA LVL A G + A+I GF D A T P +A+ A
Sbjct: 230 VIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH-----VTQPQAETMQIAMELA 284
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
+ +AGL I Y VNAHG A G
Sbjct: 285 LKDAGLAPEDIGY------------------------VNAHGTATDRG 308
Score = 28.0 bits (63), Expect = 9.6
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 99 CSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
C+SG + + A ++I+ G +++AGG E +
Sbjct: 164 CTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC 195
>gnl|CDD|236204 PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated.
Length = 498
Score = 34.5 bits (80), Expect = 0.097
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAK-----IRGFADA------AQAPEWFTTAPS 305
NA+ + D AA++L S KA LG + + + G ADA + P+ +P+
Sbjct: 238 NANDMVDQGAAVLLTSVAKARRLG---VPEDRWVYLHGGADAHDPYDILERPD-LHRSPA 293
Query: 306 --LAIPKAIANAGLEASQIDYYEINEAF-SVVAIANQKLLGL---DPEQVNAHGGAVSLG 359
A +A+A AGL ID +++ F S V +A ++ LGL DP + GG G
Sbjct: 294 IRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARE-LGLDLDDPRPLTVTGGLPFFG 352
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYG-VGGICNGG 393
P + ++ LR G+ G V NGG
Sbjct: 353 GPGNNYVTHAIAEMVERLRANPGRRGLVTA--NGG 385
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type I and II
and polyketide synthases.They are characterized by the
utlization of acyl carrier protein (ACP) thioesters as
primer substrates, as well as the nature of their active
site residues.
Length = 407
Score = 34.3 bits (79), Expect = 0.098
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
T C++ ++A+ LA ++I+ G DIVV GG+E
Sbjct: 155 IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL 193
Score = 33.2 bits (76), Expect = 0.24
Identities = 46/200 (23%), Positives = 70/200 (35%), Gaps = 22/200 (11%)
Query: 199 AAQNSGLFAWEIAPVEMSSGRGKPFIIV-----DKDEGLEKFDAAKLMKLRPSFKEGGS- 252
A + L A ++A + SG+ ++V +EGL F + E S
Sbjct: 160 GACATALEALDLAVEAIRSGKAD-IVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSR 218
Query: 253 --VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS----L 306
+ + ++GA LVL AL G + ++ G A A
Sbjct: 219 PFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIAR 278
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL-------G 359
AI A+A AGL +D S A + + E A G + + G
Sbjct: 279 AIRTALAKAGLSLDDLDVIS-AHGTSTPANDVAESRAIA-EVAGALGAPLPVTAQKALFG 336
Query: 360 HPLGCSGARILVTLLGVLRH 379
H G +GA L+ L L H
Sbjct: 337 HSKGAAGALQLIGALQSLEH 356
>gnl|CDD|235866 PRK06816, PRK06816, 3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed.
Length = 378
Score = 33.7 bits (78), Expect = 0.16
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS-- 130
G A LGA P VV + VC++GM A+ A S++ G + VA E S
Sbjct: 101 GHASMVHGELGAP-PIEVVSSA--GVCAAGMMALKYAYLSVKAGESRNAVATASELASRW 157
Query: 131 -NAPKYLAEARKGSRLGHDTIVD-------GMLKDG 158
A ++ AE K + L + + ML DG
Sbjct: 158 FRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDG 193
>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 425
Score = 33.5 bits (77), Expect = 0.22
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAA-------QAPEWFTTAPSL-AIPKA 311
++++GA ALVL S A+ G +++ + G + A +P+ +P++ AI A
Sbjct: 242 VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPD---GSPAIGAIRAA 298
Query: 312 IANAGLEASQIDYYEIN 328
+A+AGL QIDY IN
Sbjct: 299 LADAGLTPEQIDY--IN 313
>gnl|CDD|188254 TIGR02845, spore_V_AD, stage V sporulation protein AD. Bacillus
and Clostridium species contain about 10 % dipicolinic
acid (pyridine-2,6-dicarboxylic acid) by weight. This
protein family, SpoVAD, belongs to the spoVA operon that
is suggested to act in the transport of dipicolinic acid
(DPA) from the mother cell, where DPA is synthesized, to
the forespore, a process essential to sporulation.
Members of this protein family are found, so far, in
exactly those species believed capable of endospore
formation [Cellular processes, Sporulation and
germination].
Length = 327
Score = 33.1 bits (76), Expect = 0.23
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 44 AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103
A+ AL++AN+ V G++L+ A A GIP + CS+ M
Sbjct: 57 AVNLALQKANLTKDDVDLFLAGDLLNQI---ITANFVARDLGIP--FLGLY--GACSTSM 109
Query: 104 KAVMLAAQSIQLGINDIVVAG 124
+ + L A + G D V+A
Sbjct: 110 ETLALGAMLVDGGFADRVLAA 130
>gnl|CDD|236164 PRK08142, PRK08142, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 32.8 bits (75), Expect = 0.28
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIAN 314
+++DG ALV+V A L ++ K+ G +A + + + + + P A A
Sbjct: 209 VVTDGGGALVVVRPEIARSLKRPLV-KVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAE 267
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLG 343
AG+ + I Y I ++F++ + + LG
Sbjct: 268 AGVTPADIKYASIYDSFTITVLMQLEDLG 296
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase. The structure of
beta-ketoacyl synthase is similar to that of the
thiolase family and also chalcone synthase. The active
site of beta-ketoacyl synthase is located between the N
and C-terminal domains.
Length = 298
Score = 32.7 bits (76), Expect = 0.30
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 99 CSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEAR 140
CSS + A+ LA QS++ G D+ +AGG+ + + ++ +R
Sbjct: 97 CSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSR 138
>gnl|CDD|215065 PLN00123, PLN00123, isocitrate dehydrogenase (NAD+).
Length = 360
Score = 31.0 bits (70), Expect = 1.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 2 VPLEPSESIKARDVCIVGVARTPMGGFLGSLS 33
VP E ESI+ VC+ G TP+GG + SL+
Sbjct: 74 VPEEVLESIRRNKVCLKGGLATPVGGGVSSLN 105
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 424
Score = 30.7 bits (70), Expect = 1.3
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP-------SLAIPKAI 312
++ +GA LV+ + AL G +A++ G+ +A A + TA A+ A+
Sbjct: 241 VMGEGAGILVIETLEHALARGAPPLAELVGYGTSADA--YHMTAGPEDGEGARRAMLIAL 298
Query: 313 ANAGLEASQIDY 324
AG+ ++ +
Sbjct: 299 RQAGIPPEEVQH 310
>gnl|CDD|235049 PRK02534, PRK02534, 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase; Provisional.
Length = 312
Score = 30.6 bits (70), Expect = 1.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 13/55 (23%)
Query: 237 AAKLMKLRPSFKEGGS---------VTAGNASIISDGAAALVLVSGVKAL-ELGL 281
AA+L++ R F EGG + AG A +D AA LV G+ L LGL
Sbjct: 72 AAQLLRKRFPFAEGGVDITLEKRIPIGAGLAGGSTDAAAVLV---GLNLLWGLGL 123
>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 418
Score = 30.5 bits (69), Expect = 1.5
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 54 VKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113
V PL VQ ++ N +A +G R A G P S C+SG +A+ A + I
Sbjct: 137 VSPLAVQ-MYMPNGPAAAVGLE--RHAKAGVITPVSA--------CASGSEAIAQAWRQI 185
Query: 114 QLGINDIVVAGGMES 128
LG DI + GG+E+
Sbjct: 186 VLGEADIAICGGVET 200
>gnl|CDD|233478 TIGR01577, oligosac_amyl, oligosaccharide amylase. The name of
this type of amylase is based on the characterization of
an glucoamylase family enzyme from Thermoactinomyces
vulgaris. The T. vulgaris enzyme was expressed in E.
coli and, like other glucoamylases, it releases
beta-D-glucose from starch. However, unlike previously
characterized glucoamylases, this T. vulgaris amylase
hydrolyzes maltooligosaccharides (maltotetraose,
maltose) more efficiently than starch (PMID: 11549021),
indicating this enzyme belongs to a class of
glucoamylase-type enzymes with
oligosaccharide-metabolizing activity.
Length = 616
Score = 30.7 bits (69), Expect = 1.8
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 335 AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
+ ++ LGL PEQV+ G + PLG S A L+T+L
Sbjct: 572 VMDHRTDLGLLPEQVDKETGKPAWAVPLGWSHAMFLLTVL 611
>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional.
Length = 382
Score = 29.1 bits (66), Expect = 3.9
Identities = 15/26 (57%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 98 VCSSGMKAVMLAAQSIQLGINDIVVA 123
V SSG++A+MLAAQ++ +G D VVA
Sbjct: 89 VTSSGVQALMLAAQAL-VGPGDEVVA 113
>gnl|CDD|235571 PRK05704, PRK05704, dihydrolipoamide succinyltransferase;
Validated.
Length = 407
Score = 29.4 bits (67), Expect = 3.9
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 246 SFKEGGSVTAGNA-SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
+EG +VT G I +GAAA A A A AA A E A
Sbjct: 60 LAEEGDTVTVGQVLGRIDEGAAA----GAAAAAAAAAAAAAAAPAQAQAAAAAEQSNDAL 115
Query: 305 SLAIPKAIANAGLEASQID 323
S A K A GL+AS +
Sbjct: 116 SPAARKLAAENGLDASAVK 134
>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 406
Score = 29.3 bits (66), Expect = 4.5
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 22/125 (17%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL-----AIPKA 311
+ ++ +GA ALVL A + G ++ A+I GF ++ A T+P+ A+ A
Sbjct: 226 DGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANH--ITSPAPEGPLRAMKAA 283
Query: 312 IANAGLEASQIDYYE-------INEAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPL 362
+ AG +IDY N+ A+ ++L G + V++ G + GH L
Sbjct: 284 LEMAG--NPKIDYINAHGTSTPYNDKNETAAL--KELFGSKEKVPPVSSTKGQI--GHCL 337
Query: 363 GCSGA 367
G +GA
Sbjct: 338 GAAGA 342
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP)
including hsFATP2, hsFATP5, and hsFATP6, and similar
proteins. Fatty acid transport proteins (FATP) of this
family transport long-chain or very-long-chain fatty
acids across the plasma membrane. At least five copies
of FATPs are identified in mammalian cells. This family
includes hsFATP2, hsFATP5, and hsFATP6, and similar
proteins. Each FATP has unique patterns of tissue
distribution. These FATPs also have fatty acid CoA
synthetase activity, thus playing dual roles as fatty
acid transporters and its activation enzymes. The hsFATP
proteins exist in two splice variants; the b variant,
lacking exon 3, has no acyl-CoA synthetase activity.
FATPs are key players in the trafficking of exogenous
fatty acids into the cell and in intracellular fatty
acid homeostasis.
Length = 535
Score = 28.9 bits (65), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 342 LGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
LG +N + + SL H C GAR+LV
Sbjct: 52 LGCPTAFLNTNIRSGSLLHCFRCCGARVLVA 82
>gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III.
Length = 379
Score = 28.9 bits (65), Expect = 5.8
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTT 94
+ T L A + AL+ A V P V V +L G AP QAALG + +
Sbjct: 95 TLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGC---TNALAFD 151
Query: 95 INKVCSSGMKAVMLAAQSIQLG-INDIVVAGG 125
+ CS + ++ AA+ I+ G +++V G
Sbjct: 152 LTAACSGFVLGLVTAARFIRGGGYKNVLVIGA 183
>gnl|CDD|219178 pfam06792, UPF0261, Uncharacterized protein family (UPF0261).
Length = 403
Score = 28.7 bits (65), Expect = 6.0
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 378 RHKKGKY-GVGGICNGGGGASALVLELMQAVRVGHSKL 414
+ +GK GV G+ GG G +AL M+A+ +G KL
Sbjct: 88 LYDEGKIDGVIGL--GGSGGTALATPAMRALPIGVPKL 123
>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I;
Reviewed.
Length = 406
Score = 28.5 bits (64), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
+I+ C++ + A + IQLG DIV AGG E +
Sbjct: 157 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELD 193
>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 414
Score = 28.4 bits (63), Expect = 8.0
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 231 GLEKFDAAKLMKLRPSFKEGGSV---TAGNASIISDGAAALVLVSGVKALELGLQVIAKI 287
G+ F AAK + R + S + ++ DGA +VL A G ++ A++
Sbjct: 199 GMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAEL 258
Query: 288 RGFADAAQAPEWFTTAPS-------LAIPKAIANAGLEASQIDY 324
GF + A + T+PS LA+ A+ +AG+ QI Y
Sbjct: 259 VGFGMSGDA--YHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGY 300
>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional.
Length = 399
Score = 28.2 bits (63), Expect = 8.1
Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 23/126 (18%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEV---------F 63
V I+G P G + + G +A AL A + VQ V +
Sbjct: 4 EPVYILGAGMHPWGKW-----GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGY 58
Query: 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVA 123
G V A QA LG N ++ C+SG +A+ A I G+ D+ +
Sbjct: 59 PGFVAGATFAQA------LGW---NGAPVSSSYAACASGSQALQSARAQILAGLCDVALV 109
Query: 124 GGMESM 129
G ++
Sbjct: 110 VGADTT 115
>gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal
domain. The structure of beta-ketoacyl synthase is
similar to that of the thiolase family (pfam00108) and
also chalcone synthase. The active site of beta-ketoacyl
synthase is located between the N and C-terminal
domains.
Length = 119
Score = 27.1 bits (61), Expect = 8.8
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 30/83 (36%)
Query: 285 AKIRGFADAAQ-APEWFTTAPSL-----AIPKAIANAGLEASQIDYYEINEAFSVVAIAN 338
A IRG A A TAP+ AI A+A+AGL+ +DY
Sbjct: 2 AVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDY-------------- 47
Query: 339 QKLLGLDPEQVNAHGGAVSLGHP 361
V AHG LG P
Sbjct: 48 ----------VEAHGTGTPLGDP 60
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.134 0.386
Gapped
Lambda K H
0.267 0.0940 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,928,101
Number of extensions: 2086865
Number of successful extensions: 2188
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2023
Number of HSP's successfully gapped: 138
Length of query: 414
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 315
Effective length of database: 6,546,556
Effective search space: 2062165140
Effective search space used: 2062165140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (26.5 bits)